Your job contains 1 sequence.
>003633
MISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI
YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS
PDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDS
IPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPD
SKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIH
RVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRI
GVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLV
KMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEM
WCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLGRF
VMVVWLFLLMVITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSD
SLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTR
SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS
FWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQMHPHSPSSSSSFSTRYSKAVFNFFDF
IDEKEEAIKKMFTQCDYPQVHGSSGR
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003633
(806 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062586 - symbol:GLR5 "glutamate receptor 5" s... 2321 8.2e-241 1
TAIR|locus:2206095 - symbol:GLR3.3 "glutamate receptor 3.... 1951 1.3e-201 1
TAIR|locus:2207165 - symbol:GLR3.4 "AT1G05200" species:37... 1934 8.4e-200 1
TAIR|locus:2122128 - symbol:GLUR2 "glutamate receptor 2" ... 1925 7.6e-199 1
TAIR|locus:2081805 - symbol:GLR3.6 "glutamate receptor 3.... 1876 1.2e-193 1
TAIR|locus:2066107 - symbol:GLR2.7 "glutamate receptor 2.... 1136 3.1e-115 1
TAIR|locus:2047256 - symbol:GLR2.2 "glutamate receptor 2.... 1089 2.9e-110 1
TAIR|locus:2181196 - symbol:GLR2.1 "glutamate receptor 2.... 1087 4.8e-110 1
TAIR|locus:2066086 - symbol:GLR2.8 "glutamate receptor 2.... 1075 9.0e-109 1
TAIR|locus:2047251 - symbol:GLR2.3 "glutamate receptor 2.... 1037 9.5e-105 1
TAIR|locus:2066148 - symbol:GLR2.9 "glutamate receptor 2.... 877 8.6e-88 1
TAIR|locus:2166006 - symbol:GLR1.3 "glutamate receptor 1.... 580 2.2e-79 2
TAIR|locus:2079681 - symbol:GLR1.4 "glutamate receptor 1.... 559 8.0e-78 2
TAIR|locus:2166001 - symbol:ATGLR1.2 species:3702 "Arabid... 572 2.5e-73 2
TAIR|locus:2102975 - symbol:GLR1.1 "glutamate receptor 1.... 292 2.8e-44 3
UNIPROTKB|A2AVK2 - symbol:GRIN1 "Glutamate receptor ionot... 238 3.8e-31 4
UNIPROTKB|Q05586 - symbol:GRIN1 "Glutamate receptor ionot... 238 4.5e-31 4
RGD|2736 - symbol:Grin1 "glutamate receptor, ionotropic, ... 238 9.2e-31 4
UNIPROTKB|P35439 - symbol:Grin1 "Glutamate receptor ionot... 238 9.2e-31 4
MGI|MGI:95819 - symbol:Grin1 "glutamate receptor, ionotro... 238 9.2e-31 4
UNIPROTKB|F1P2J9 - symbol:GRIN1 "Uncharacterized protein"... 241 2.4e-30 4
UNIPROTKB|F1RYR0 - symbol:GRIK5 "Uncharacterized protein"... 168 2.2e-28 3
ZFIN|ZDB-GENE-051202-2 - symbol:grin1b "glutamate recepto... 239 8.4e-28 4
UNIPROTKB|B4GF83 - symbol:Nmdar1 "Glutamate [NMDA] recept... 244 1.2e-27 3
UNIPROTKB|B4KD90 - symbol:Nmdar1 "Glutamate [NMDA] recept... 246 1.6e-27 3
UNIPROTKB|Q296F7 - symbol:Nmdar1 "Glutamate [NMDA] recept... 242 1.9e-27 3
FB|FBgn0010399 - symbol:Nmdar1 "NMDA receptor 1" species:... 244 3.0e-27 3
UNIPROTKB|B3P2E5 - symbol:Nmdar1 "Glutamate [NMDA] recept... 245 4.6e-27 3
UNIPROTKB|B4I414 - symbol:Nmdar1 "Glutamate [NMDA] recept... 245 4.6e-27 3
UNIPROTKB|B4PVB0 - symbol:Nmdar1 "Glutamate [NMDA] recept... 245 4.6e-27 3
UNIPROTKB|B4QWW7 - symbol:Nmdar1 "Glutamate [NMDA] recept... 245 4.6e-27 3
ZFIN|ZDB-GENE-051202-1 - symbol:grin1a "glutamate recepto... 238 1.1e-26 4
UNIPROTKB|B3LZ39 - symbol:Nmdar1 "Glutamate [NMDA] recept... 245 1.2e-26 3
UNIPROTKB|B4MU83 - symbol:Nmdar1 "Glutamate [NMDA] recept... 247 2.9e-26 3
UNIPROTKB|Q5VSF9 - symbol:GRIN1 "Glutamate receptor ionot... 238 4.2e-26 4
UNIPROTKB|B4JHV0 - symbol:Nmdar1 "Glutamate [NMDA] recept... 245 4.7e-26 3
UNIPROTKB|Q5R1P0 - symbol:GRIN1 "Glutamate receptor ionot... 238 9.8e-26 4
UNIPROTKB|E2R3A6 - symbol:E2R3A6 "Uncharacterized protein... 238 1.1e-25 4
UNIPROTKB|B4LZB5 - symbol:Nmdar1 "Glutamate [NMDA] recept... 237 1.4e-25 3
UNIPROTKB|F1P2K1 - symbol:GRIN1 "Uncharacterized protein"... 241 1.7e-25 4
UNIPROTKB|F1NKY9 - symbol:GRIN1 "Uncharacterized protein"... 241 2.7e-25 4
UNIPROTKB|F1P2J8 - symbol:GRIN1 "Uncharacterized protein"... 241 3.6e-25 4
UNIPROTKB|F1PY46 - symbol:GRIN1 "Glutamate receptor ionot... 238 7.1e-25 4
ZFIN|ZDB-GENE-030131-6502 - symbol:grik1a "glutamate rece... 178 7.3e-25 3
UNIPROTKB|L7MTP7 - symbol:GRIN1 "Glutamate receptor ionot... 238 8.1e-25 4
UNIPROTKB|F6Y5R7 - symbol:GRIN1 "Glutamate receptor ionot... 238 8.4e-25 4
UNIPROTKB|G3N3K3 - symbol:GRIN1 "Uncharacterized protein"... 222 5.3e-24 4
UNIPROTKB|J9NWC8 - symbol:GRIN1 "Glutamate receptor ionot... 238 5.4e-24 4
UNIPROTKB|F1PHA8 - symbol:GRIK4 "Uncharacterized protein"... 198 9.5e-24 3
MGI|MGI:95817 - symbol:Grik4 "glutamate receptor, ionotro... 195 1.6e-23 3
UNIPROTKB|Q16099 - symbol:GRIK4 "Glutamate receptor ionot... 198 2.5e-23 3
UNIPROTKB|E1C2Q1 - symbol:GRIK4 "Uncharacterized protein"... 196 7.1e-23 3
RGD|2734 - symbol:Grik4 "glutamate receptor, ionotropic, ... 185 2.0e-22 3
UNIPROTKB|Q01812 - symbol:Grik4 "Glutamate receptor ionot... 185 2.0e-22 3
UNIPROTKB|E7EMV5 - symbol:GRIA1 "Glutamate receptor 1" sp... 154 3.6e-22 3
UNIPROTKB|F1P7K5 - symbol:GRIK2 "Uncharacterized protein"... 181 5.2e-22 2
UNIPROTKB|F1P7K6 - symbol:GRIK2 "Uncharacterized protein"... 181 5.7e-22 2
UNIPROTKB|F1MG21 - symbol:GRIK2 "Uncharacterized protein"... 181 6.0e-22 2
WB|WBGene00001614 - symbol:glr-3 species:6239 "Caenorhabd... 208 8.7e-22 3
WB|WBGene00001613 - symbol:glr-2 species:6239 "Caenorhabd... 208 1.0e-21 3
UNIPROTKB|F8WEZ8 - symbol:GRIK2 "Glutamate receptor ionot... 181 1.1e-21 2
UNIPROTKB|Q13002 - symbol:GRIK2 "Glutamate receptor ionot... 181 1.2e-21 2
UNIPROTKB|Q38PU3 - symbol:GRIK2 "Glutamate receptor ionot... 180 1.6e-21 2
UNIPROTKB|F1LP48 - symbol:Grik2 "Glutamate receptor ionot... 178 2.3e-21 2
MGI|MGI:95815 - symbol:Grik2 "glutamate receptor, ionotro... 178 2.6e-21 2
RGD|2733 - symbol:Grik2 "glutamate receptor, ionotropic, ... 178 2.6e-21 2
UNIPROTKB|P42260 - symbol:Grik2 "Glutamate receptor ionot... 178 2.6e-21 2
ZFIN|ZDB-GENE-070821-5 - symbol:grik4 "glutamate receptor... 182 5.8e-21 3
UNIPROTKB|F1NU20 - symbol:GRIK2 "Uncharacterized protein"... 177 6.3e-21 2
UNIPROTKB|E7EPZ0 - symbol:GRIK1 "Glutamate receptor ionot... 168 1.5e-20 2
UNIPROTKB|E7EPY9 - symbol:GRIK1 "Glutamate receptor ionot... 168 1.7e-20 2
ZFIN|ZDB-GENE-020125-7 - symbol:gria4a "glutamate recepto... 146 1.8e-20 3
UNIPROTKB|Q38PU0 - symbol:GRIK5 "KA2" species:9541 "Macac... 180 3.7e-20 3
FB|FBgn0264000 - symbol:GluRIB "Glutamate receptor IB" sp... 158 4.1e-20 3
MGI|MGI:95814 - symbol:Grik1 "glutamate receptor, ionotro... 168 4.1e-20 2
UNIPROTKB|Q16478 - symbol:GRIK5 "Glutamate receptor ionot... 180 4.2e-20 3
UNIPROTKB|F1NZT2 - symbol:GRIK1 "Uncharacterized protein"... 172 4.4e-20 2
ZFIN|ZDB-GENE-030131-8013 - symbol:gria4b "glutamate rece... 142 5.0e-20 3
MGI|MGI:95818 - symbol:Grik5 "glutamate receptor, ionotro... 180 5.3e-20 3
RGD|2735 - symbol:Grik5 "glutamate receptor, ionotropic, ... 180 5.3e-20 3
UNIPROTKB|J9P242 - symbol:GRIK5 "Uncharacterized protein"... 180 5.3e-20 3
FB|FBgn0004619 - symbol:GluRIA "Glutamate receptor IA" sp... 162 5.5e-20 3
UNIPROTKB|I3LT35 - symbol:GRIK1 "Uncharacterized protein"... 169 6.2e-20 2
ZFIN|ZDB-GENE-020125-2 - symbol:gria1b "glutamate recepto... 162 6.9e-20 3
UNIPROTKB|E2RFB5 - symbol:GRIK5 "Uncharacterized protein"... 175 1.8e-19 3
UNIPROTKB|F1S9S0 - symbol:GRIK4 "Uncharacterized protein"... 195 1.9e-19 3
UNIPROTKB|F1M4B0 - symbol:Grik1 "Glutamate receptor ionot... 168 2.1e-19 2
UNIPROTKB|K7GSB6 - symbol:GRIK5 "Uncharacterized protein"... 165 2.5e-19 2
UNIPROTKB|F1P0S5 - symbol:GRIA3 "Uncharacterized protein"... 156 2.8e-19 3
ZFIN|ZDB-GENE-081104-209 - symbol:si:ch211-264f5.8 "si:ch... 186 3.2e-19 3
UNIPROTKB|F1LPK4 - symbol:Gria2 "Glutamate receptor 2" sp... 174 3.5e-19 4
UNIPROTKB|F1N246 - symbol:GRIK1 "Uncharacterized protein"... 171 3.8e-19 2
UNIPROTKB|D4ACE2 - symbol:Grik1 "Glutamate receptor ionot... 168 4.5e-19 2
FB|FBgn0051201 - symbol:GluRIIE "Glutamate receptor IIE" ... 152 9.1e-19 3
ZFIN|ZDB-GENE-020125-1 - symbol:gria1a "glutamate recepto... 145 1.1e-18 4
ZFIN|ZDB-GENE-030616-53 - symbol:gria3b "glutamate recept... 151 2.3e-18 3
UNIPROTKB|A9Z1Z8 - symbol:GRIK3 "Glutamate receptor, iono... 175 3.2e-18 2
MGI|MGI:95810 - symbol:Gria3 "glutamate receptor, ionotro... 156 3.5e-18 3
UNIPROTKB|G3V6Z5 - symbol:Gria3 "Glutamate receptor, iono... 156 3.5e-18 3
UNIPROTKB|Q13003 - symbol:GRIK3 "Glutamate receptor ionot... 175 3.7e-18 2
WARNING: Descriptions of 393 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2062586 [details] [associations]
symbol:GLR5 "glutamate receptor 5" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC005700 GO:GO:0004965
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AF210701
IPI:IPI00548986 PIR:F84732 PIR:T51136 RefSeq:NP_565744.1
UniGene:At.13201 ProteinModelPortal:Q9SDQ4 SMR:Q9SDQ4 IntAct:Q9SDQ4
PaxDb:Q9SDQ4 PRIDE:Q9SDQ4 EnsemblPlants:AT2G32400.1 GeneID:817801
KEGG:ath:AT2G32400 GeneFarm:2534 TAIR:At2g32400 eggNOG:NOG282132
InParanoid:Q9SDQ4 OMA:NSSHRIQ PhylomeDB:Q9SDQ4
ProtClustDB:CLSN2688630 Genevestigator:Q9SDQ4 GermOnline:AT2G32400
Uniprot:Q9SDQ4
Length = 921
Score = 2321 (822.1 bits), Expect = 8.2e-241, P = 8.2e-241
Identities = 444/800 (55%), Positives = 592/800 (74%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
IS++A GL PLVSFAATDPTLSALQFP+F+R+T +D+ QM+A+ DLI+FYGWKEVI++Y
Sbjct: 111 ISDIAKGLHFPLVSFAATDPTLSALQFPFFLRTTPNDAHQMSALVDLINFYGWKEVISVY 170
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSP 121
DD+ GRNG+SAL + L K +++SYK+PL V ++ +T LN SK +GPRVY++H P
Sbjct: 171 SDDELGRNGVSALDDELYKKRSRISYKVPLSVHSDEKFLTNALNKSKSIGPRVYILHFGP 230
Query: 122 DPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDSI 181
DP LRIF AQKLQMMT+ YVWLATDWLS TL+S S ++ +L+ L+GVVGLRQH P+S+
Sbjct: 231 DPLLRIFDIAQKLQMMTHEYVWLATDWLSVTLDSLS--DKGTLKRLEGVVGLRQHIPESV 288
Query: 182 PKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEH-NITFSASHELPD 240
+ F + +Q + +N Y L+AYDTVW +A I++ +NE NITFS S +L
Sbjct: 289 KMEHFTHK---LQS----NRSMNAYALHAYDTVWMIAHGIEELLNEGINITFSYSEKLLH 341
Query: 241 SKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIH 300
++ T++ LE++K F+ G LL KLL+ NFTG++GQVQF RN++ Y++IN++K ++H
Sbjct: 342 ARGTKLHLEKIKFFNSGELLLEKLLKVNFTGIAGQVQFGSGRNVIGCDYEIINVNKTDVH 401
Query: 301 RVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRI 360
VG+W GFSV+ P+T + + D KL +ITWPGG E PRGWVIAD+A PL+I
Sbjct: 402 TVGFWSKNGGFSVVAPKTRHSQKKTSFVSDEKLGDITWPGGGREKPRGWVIADSADPLKI 461
Query: 361 GVPRRASFVGFVTEE-HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGL 419
VPRR SFV FVTEE + SH++QG+CID+ +EALK VPY VPY FE FG+G S+P+Y+ L
Sbjct: 462 VVPRRVSFVEFVTEEKNSSHRIQGFCIDVFIEALKFVPYSVPYIFEPFGNGHSSPNYNHL 521
Query: 420 VKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVE 479
++MV + V+DAAVGDIAIV +R+K+VDFSQPY STGLV+V P N+ A+ W+FL+PFT
Sbjct: 522 IQMVTDGVYDAAVGDIAIVPSRSKLVDFSQPYASTGLVVVIPANDDNAT-WIFLRPFTSR 580
Query: 480 MWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLGR 539
+WCV SF++IAVVIWILEHR+N+DFRGPPRRQ++TM LFSFSTLFK NQE T+S+L R
Sbjct: 581 LWCVVLVSFLVIAVVIWILEHRINEDFRGPPRRQLSTMLLFSFSTLFKRNQEDTISNLAR 640
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLS 599
+T+SYTA+L+SILTVQQL +++ GI+SL ++ PIGYQ G+F YL+
Sbjct: 641 LVMIVWLFLLMVLTASYTANLTSILTVQQLPSAITGIDSLRASEVPIGYQAGTFTLEYLT 700
Query: 600 DSLRIQKSRLISLGSPEDYERALRQGPRN-GGVAAIVDELPYVQLFLSNQTDFGIIGQPF 658
SL + +SRL+ L S E+YE+AL+ GP N GGVAAIVDELPY++LFL+ +T F I+G+PF
Sbjct: 701 YSLGMARSRLVPLDSTEEYEKALKLGPTNWGGVAAIVDELPYIELFLAERTGFKIVGEPF 760
Query: 659 TRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRL 718
GWGFAF+RDSPLA+ MSTAILKLSE LQ++ +KW CK C + + EP+QL L
Sbjct: 761 MHRGWGFAFKRDSPLAIDMSTAILKLSETRKLQEIRKKWLCKTNCAGKSNWNPEPNQLHL 820
Query: 719 ISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQMXXXX--XXXXXXXXTRYSKAVFN 776
SF GLYL+C IT +AFLVF+LRM+ Q+VRY++ + R + VF+
Sbjct: 821 KSFKGLYLVCIAITVSAFLVFVLRMIRQFVRYRRMERTSSMPRASWSASPTLRLRELVFD 880
Query: 777 FFDFIDEKEEAIKKMFTQCD 796
F +F+DEKEEAIK+MF + D
Sbjct: 881 FVEFVDEKEEAIKRMFRRSD 900
>TAIR|locus:2206095 [details] [associations]
symbol:GLR3.3 "glutamate receptor 3.3" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005262 "calcium channel activity"
evidence=IMP] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0008066 "glutamate receptor activity" evidence=IMP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IMP]
[GO:0009630 "gravitropism" evidence=IMP] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 GO:GO:0009630
InterPro:IPR001828 GO:GO:0071230 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AC025815
IPI:IPI00548873 PIR:C96495 RefSeq:NP_174978.1 UniGene:At.39090
ProteinModelPortal:Q9C8E7 TCDB:1.A.10.1.10 PaxDb:Q9C8E7
PRIDE:Q9C8E7 EnsemblPlants:AT1G42540.1 GeneID:840859
KEGG:ath:AT1G42540 TAIR:At1g42540 InParanoid:Q9C8E7 OMA:FTCERRV
PhylomeDB:Q9C8E7 ProtClustDB:CLSN2914596 ArrayExpress:Q9C8E7
Genevestigator:Q9C8E7 Uniprot:Q9C8E7
Length = 933
Score = 1951 (691.8 bits), Expect = 1.3e-201, P = 1.3e-201
Identities = 387/793 (48%), Positives = 521/793 (65%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
MIS +AN L+VPL+SFA TDP +S LQFPYFIR+TQSD QM A+A ++DFYGWKEVIA+
Sbjct: 108 MISHMANELRVPLLSFAVTDPVMSPLQFPYFIRTTQSDLYQMDAIASIVDFYGWKEVIAV 167
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPL-P-VQFNQHDITVLLNNSKPLGPRVYVVH 118
+VDDD+GRNG++AL++ L +++YK L P N+++I +L L PR+ V+H
Sbjct: 168 FVDDDFGRNGVAALNDKLASRRLRITYKAGLHPDTAVNKNEIMNMLIKIMLLQPRIVVIH 227
Query: 119 VSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTP 178
V + G +F A+ L MM N YVW+ATDWLS L+S S + L +QGV+ LR HTP
Sbjct: 228 VYSELGFAVFKEAKYLGMMGNGYVWIATDWLSTNLDSSSPLPAERLETIQGVLVLRPHTP 287
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEH-NITFSASHE 237
DS K+ F RW M G S LNTYGLYAYD+V +AR +DKF + NI+FS +H
Sbjct: 288 DSDFKREFFKRWRKMS--G-ASLALNTYGLYAYDSVMLLARGLDKFFKDGGNISFS-NHS 343
Query: 238 LPDS--KATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
+ ++ K+ + LE + VFDGG LL+ +L T GL+GQ+QF DR+ YD+IN+
Sbjct: 344 MLNTLGKSGNLNLEAMTVFDGGEALLKDILGTRMVGLTGQLQFTPDRSRTRPAYDIINVA 403
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNA 355
+ ++GYW + SG S + PE L K + KL+++ WPG PRGWV ++N
Sbjct: 404 GTGVRQIGYWSNHSGLSTVLPELLYTKEKPNMSTSPKLKHVIWPGETFTKPRGWVFSNNG 463
Query: 356 RPLRIGVPRRASFVGFVTEEHDSHKV-QGYCIDILLEALKLVPYDVPYKFELFGDGLSNP 414
+ L+IGVP R S+ FV++ + + +G+CID+ A+ L+PY VP KF +G+G NP
Sbjct: 464 KELKIGVPLRVSYKEFVSQIRGTENMFKGFCIDVFTAAVNLLPYAVPVKFIPYGNGKENP 523
Query: 415 SYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLK 474
SY +V+M+ FD VGD+AIVTNRTKIVDF+QPY ++GLV+VAP + AW FL+
Sbjct: 524 SYTHMVEMITTGNFDGVVGDVAIVTNRTKIVDFTQPYAASGLVVVAPFKKLNSGAWAFLR 583
Query: 475 PFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATV 534
PF MW VT F+ + +V+WILEHR ND+FRGPP+RQ T+ FSFST+F ++E TV
Sbjct: 584 PFNRLMWAVTGCCFLFVGIVVWILEHRTNDEFRGPPKRQCVTILWFSFSTMFFAHRENTV 643
Query: 535 SSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFA 594
S+LGR I SSYTASL+SILTVQQLS+ +KGIESL D PIGYQVGSFA
Sbjct: 644 STLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLRERDDPIGYQVGSFA 703
Query: 595 YSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII 654
SYL + L I +SRL+ LG+PE Y +AL+ GP GGVAAIVDE PYV+LFLS+ + I+
Sbjct: 704 ESYLRNELNISESRLVPLGTPEAYAKALKDGPSKGGVAAIVDERPYVELFLSSNCAYRIV 763
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPH 714
GQ FT+SGWGFAF RDSPLA+ +STAIL+L+ENG LQ++H+KW K C E + E
Sbjct: 764 GQEFTKSGWGFAFPRDSPLAIDLSTAILELAENGDLQRIHDKWLMKNACTLENAE-LESD 822
Query: 715 QLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQMXXXXXXXXXXXXTRYSKAV 774
+L L SFWGL+L+CG A ++ ++++ Q + + S +
Sbjct: 823 RLHLKSFWGLFLICGVACLLALFLYFVQIIRQLYKKPTDDAIARDQQQNHDSSSMRSTRL 882
Query: 775 FNFFDFIDEKEEA 787
F +DEKEE+
Sbjct: 883 QRFLSLMDEKEES 895
>TAIR|locus:2207165 [details] [associations]
symbol:GLR3.4 "AT1G05200" species:3702 "Arabidopsis
thaliana" [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0019722
"calcium-mediated signaling" evidence=IDA] [GO:0070417 "cellular
response to cold" evidence=IEP] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEP] [GO:0071311
"cellular response to acetate" evidence=IEP] [GO:0005262 "calcium
channel activity" evidence=IMP] [GO:0006816 "calcium ion transport"
evidence=IDA;IMP] [GO:0008066 "glutamate receptor activity"
evidence=IMP] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IDA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009507 GO:GO:0009611
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0015276 GO:GO:0071260 GO:GO:0070417 InterPro:IPR001828
GO:GO:0071230 EMBL:AC000098 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 TCDB:1.A.10.1.10
EMBL:AY072070 EMBL:AK118206 EMBL:AF167355 IPI:IPI00517695
IPI:IPI00538965 PIR:D86186 PIR:T51135 RefSeq:NP_001030971.1
RefSeq:NP_172012.2 UniGene:At.10412 UniGene:At.66937
ProteinModelPortal:Q8GXJ4 PRIDE:Q8GXJ4 EnsemblPlants:AT1G05200.1
EnsemblPlants:AT1G05200.2 GeneID:839268 KEGG:ath:AT1G05200
GeneFarm:2532 TAIR:At1g05200 InParanoid:Q8GXJ4 OMA:WHLDEND
PhylomeDB:Q8GXJ4 ProtClustDB:CLSN2690705 Genevestigator:Q8GXJ4
GermOnline:AT1G05200 GO:GO:0071311 Uniprot:Q8GXJ4
Length = 959
Score = 1934 (685.9 bits), Expect = 8.4e-200, P = 8.4e-200
Identities = 385/801 (48%), Positives = 531/801 (66%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
MIS VAN L VPL+SF ATDPTLS+LQFPYF+R+TQ+D QM A+AD + + GW++VIAI
Sbjct: 140 MISYVANELHVPLLSFGATDPTLSSLQFPYFLRTTQNDYFQMHAIADFLSYSGWRQVIAI 199
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS 120
+VDD+ GRNGIS L ++L K +++SYK + + I LL + + RV+VVHV+
Sbjct: 200 FVDDECGRNGISVLGDVLAKKRSRISYKAAITPGADSSSIRDLLVSVNLMESRVFVVHVN 259
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDS 180
PD GL +F+ A+ L MM + YVW+ATDWL ++S ++ ++ +LQGVV R +T +S
Sbjct: 260 PDSGLNVFSVAKSLGMMASGYVWIATDWLPTAMDSMEHVDSDTMDLLQGVVAFRHYTIES 319
Query: 181 IPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHN-ITFSASHELP 239
K+ F++RW ++ G N+Y +YAYD+VW VAR++D F E+N ITFS L
Sbjct: 320 SVKRQFMARWKNLRPND----GFNSYAMYAYDSVWLVARALDVFFRENNNITFSNDPNLH 375
Query: 240 DSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEI 299
+ + +QL L VF+ G ++ +L N TG++G +QF+ DRN V+ Y+V+N++
Sbjct: 376 KTNGSTIQLSALSVFNEGEKFMKIILGMNHTGVTGPIQFDSDRNRVNPAYEVLNLEGTAP 435
Query: 300 HRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLR 359
VGYW + SG SV+ PETL + + S + +L+ I +PG T+ PRGWV +N +PLR
Sbjct: 436 RTVGYWSNHSGLSVVHPETLYSRPPNTSTANQRLKGIIYPGEVTKPPRGWVFPNNGKPLR 495
Query: 360 IGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGL 419
IGVP R S+ +V+++ + V+GYCID+ A++L+PY VP + L+GDG NPSYD L
Sbjct: 496 IGVPNRVSYTDYVSKDKNPPGVRGYCIDVFEAAIELLPYPVPRTYILYGDGKRNPSYDNL 555
Query: 420 VKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVE 479
V V D FD AVGDI IVTNRT+ VDF+QP+I +GLV+VAP+ K+S W FLKPFT+E
Sbjct: 556 VNEVVADNFDVAVGDITIVTNRTRYVDFTQPFIESGLVVVAPVKEAKSSPWSFLKPFTIE 615
Query: 480 MWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLGR 539
MW VT F+ + ++WILEHR N +FRGPPRRQ+ T+F FSFST+F +++E TVSSLGR
Sbjct: 616 MWAVTGGFFLFVGAMVWILEHRFNQEFRGPPRRQLITIFWFSFSTMFFSHRENTVSSLGR 675
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLS 599
I SSYTASL+SILT++QL++ ++GI+SL+T++ PIG Q G+FA +YL
Sbjct: 676 FVLIIWLFVVLIINSSYTASLTSILTIRQLTSRIEGIDSLVTSNEPIGVQDGTFARNYLI 735
Query: 600 DSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQT-DFGIIGQPF 658
+ L I SR++ L E Y AL++GP GGVAAIVDELPY+++ L+N F +GQ F
Sbjct: 736 NELNILPSRIVPLKDEEQYLSALQRGPNAGGVAAIVDELPYIEVLLTNSNCKFRTVGQEF 795
Query: 659 TRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWF-CKEGCPEERRQHSEPHQLR 717
TR+GWGFAFQRDSPLAV MSTAIL+LSE G L+K+H KW K C + +SE QL
Sbjct: 796 TRTGWGFAFQRDSPLAVDMSTAILQLSEEGELEKIHRKWLNYKHECSMQI-SNSEDSQLS 854
Query: 718 LISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQMXXXXXXXXX--XXXTRYSKAV- 774
L SFWGL+L+CG F A VF R+ QY R + R S+A
Sbjct: 855 LKSFWGLFLICGITCFMALTVFFWRVFWQYQRLLPESADEERAGEVSEPSRSGRGSRAPS 914
Query: 775 FN-FFDFIDEKEEAIKKMFTQ 794
F +D++E IK++ Q
Sbjct: 915 FKELIKVVDKREAEIKEILKQ 935
>TAIR|locus:2122128 [details] [associations]
symbol:GLUR2 "glutamate receptor 2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=IMP] [GO:0006883 "cellular sodium ion
homeostasis" evidence=IMP] [GO:0030007 "cellular potassium ion
homeostasis" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:AL022604
EMBL:AL161587 GO:GO:0071230 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 EMBL:AF159498 EMBL:AF159499 EMBL:AY059778
IPI:IPI00535851 PIR:T06128 RefSeq:NP_567981.1 RefSeq:NP_974686.1
UniGene:At.2283 ProteinModelPortal:Q93YT1 PRIDE:Q93YT1
EnsemblPlants:AT4G35290.1 EnsemblPlants:AT4G35290.2 GeneID:829682
KEGG:ath:AT4G35290 TAIR:At4g35290 InParanoid:Q93YT1 OMA:MIDELNI
PhylomeDB:Q93YT1 ProtClustDB:CLSN2689771 Genevestigator:Q93YT1
GermOnline:AT4G35290 Uniprot:Q93YT1
Length = 912
Score = 1925 (682.7 bits), Expect = 7.6e-199, P = 7.6e-199
Identities = 389/797 (48%), Positives = 530/797 (66%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
++S +AN L VP++SF A DP+LSALQFP+F+++ SD M A+A++I +YGW EVIA+
Sbjct: 109 VLSHLANELSVPMLSFTALDPSLSALQFPFFVQTAPSDLFLMRAIAEMISYYGWSEVIAL 168
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ-HDITVLLNNSKPLGPRVYVV 117
Y DDD RNGI+AL + LE K+SYK LPL V +I L + + RV +V
Sbjct: 169 YNDDDNSRNGITALGDELEGRRCKISYKAVLPLDVVITSPREIINELVKIQGMESRVIIV 228
Query: 118 HVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHT 177
+ P G +IF AQKL MM YVW+AT WL++ L+S + + + L+GV+ LR HT
Sbjct: 229 NTFPKTGKKIFEEAQKLGMMEKGYVWIATTWLTSLLDSVNPLPAKTAESLRGVLTLRIHT 288
Query: 178 PDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEH-NITFSASH 236
P+S KK F++RW+ + G V GLN YGLYAYDTVW +AR++ + ++ NI+FS+
Sbjct: 289 PNSKKKKDFVARWNKLSN-GTV--GLNVYGLYAYDTVWIIARAVKRLLDSRANISFSSDP 345
Query: 237 ELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
+L K + L L +FD G+ L ++ TN TG++GQ+QF DR+++ YD+IN+
Sbjct: 346 KLTSMKGGGSLNLGALSIFDQGSQFLDYIVNTNMTGVTGQIQFLPDRSMIQPSYDIINVV 405
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNA 355
++GYW + SG S++PPE+L K + S + L N+TWPGG +ETPRGWV +N
Sbjct: 406 DDGFRQIGYWSNHSGLSIIPPESLYKKLSNRSSSNQHLNNVTWPGGTSETPRGWVFPNNG 465
Query: 356 RPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPS 415
R LRIGVP RASF FV+ S+KVQGY ID+ A+KL+ Y VP++F LFGDGL NP+
Sbjct: 466 RRLRIGVPDRASFKEFVSRLDGSNKVQGYAIDVFEAAVKLISYPVPHEFVLFGDGLKNPN 525
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++ V V VFDA VGDIAIVT RT+IVDF+QPYI +GLV+VAP+ + W FL+P
Sbjct: 526 FNEFVNNVTIGVFDAVVGDIAIVTKRTRIVDFTQPYIESGLVVVAPVTKLNDTPWAFLRP 585
Query: 476 FTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVS 535
FT MW VTAA F+++ VIWILEHR+ND+FRGPPR+QI T+ FSFST+F +++E TVS
Sbjct: 586 FTPPMWAVTAAFFLIVGSVIWILEHRINDEFRGPPRKQIVTILWFSFSTMFFSHRENTVS 645
Query: 536 SLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAY 595
+LGR ITSSYTASL+SILTVQQL++ ++G+++LI++ +G+QVGS+A
Sbjct: 646 TLGRAVLLIWLFVVLIITSSYTASLTSILTVQQLNSPIRGVDTLISSSGRVGFQVGSYAE 705
Query: 596 SYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIG 655
+Y+ D L I +SRL+ LGSP++Y AL+ NG VAAIVDE PYV LFLS F I G
Sbjct: 706 NYMIDELNIARSRLVPLGSPKEYAAALQ----NGTVAAIVDERPYVDLFLSEFCGFAIRG 761
Query: 656 QPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEP-- 713
Q FTRSGWGFAF RDSPLA+ MSTAIL LSE G LQK+H+KW + C S+
Sbjct: 762 QEFTRSGWGFAFPRDSPLAIDMSTAILGLSETGQLQKIHDKWLSRSNCSNLNGSVSDEDS 821
Query: 714 HQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQMXXXXXXXXXXXXTRYSKA 773
QL+L SFWGL+L+CG F A ++ ++V + R+ + +R SK+
Sbjct: 822 EQLKLRSFWGLFLVCGISCFIALFIYFFKIVRDFFRHGKYD---EEATVPSPESSR-SKS 877
Query: 774 VFNFFDFIDEKEEAIKK 790
+ F + DEKE+ K+
Sbjct: 878 LQTFLAYFDEKEDESKR 894
>TAIR|locus:2081805 [details] [associations]
symbol:GLR3.6 "glutamate receptor 3.6" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230
EMBL:AL133452 GO:GO:0004965 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:BT004264 IPI:IPI00517161
PIR:T45779 RefSeq:NP_190716.3 UniGene:At.35384
ProteinModelPortal:Q84W41 EnsemblPlants:AT3G51480.1 GeneID:824311
KEGG:ath:AT3G51480 TAIR:At3g51480 InParanoid:Q84W41 OMA:FTKNGWG
PhylomeDB:Q84W41 ProtClustDB:CLSN2918557 Genevestigator:Q84W41
GermOnline:AT3G51480 Uniprot:Q84W41
Length = 903
Score = 1876 (665.4 bits), Expect = 1.2e-193, P = 1.2e-193
Identities = 368/790 (46%), Positives = 521/790 (65%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+++ VA LK+P++SF+ATDPT+S LQFP+FIR++Q+D QMAA+AD++ FYGW+EV+AI
Sbjct: 109 VVAHVATELKIPILSFSATDPTMSPLQFPFFIRTSQNDLFQMAAIADIVQFYGWREVVAI 168
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS 120
Y DDDYGRNG++AL + L + ++SYK LP + +IT LL R+ VVH S
Sbjct: 169 YGDDDYGRNGVAALGDRLSEKRCRISYKAALPPAPTRENITDLLIKVALSESRIIVVHAS 228
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDS 180
GL +F A+ L MM+ YVW+AT+WLS +++ S + ++ +QGV+ LR HTP+S
Sbjct: 229 FIWGLELFNVARNLGMMSTGYVWIATNWLSTIIDTDSPLPLDTINNIQGVITLRLHTPNS 288
Query: 181 IPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEH-NITFSASHELP 239
I K+ F+ RW L GL+TY LYAYDTVW +A++ID F + N++FS + +
Sbjct: 289 IMKQNFVQRWHN-----LTHVGLSTYALYAYDTVWLLAQAIDDFFKKGGNVSFSKNPIIS 343
Query: 240 DSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEI 299
+ + L+ LKVFDGG L +LQ + GL+G+++F DRN+V+ +DV+N+
Sbjct: 344 ELGGGNLHLDALKVFDGGKIFLESILQVDRIGLTGRMKFTSDRNLVNPAFDVLNVIGTGY 403
Query: 300 HRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLR 359
+GYWF+ SG SV+P + ++ N S S KL ++ WPG + PRGWV ++N R LR
Sbjct: 404 TTIGYWFNHSGLSVMPADEME--NTSFS--GQKLHSVVWPGHSIKIPRGWVFSNNGRHLR 459
Query: 360 IGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGL 419
IGVP R F V+ + + + G+C+D+ + A+ L+PY VP++ FG+G NPS L
Sbjct: 460 IGVPNRYRFEEVVSVKSNG-MITGFCVDVFIAAINLLPYAVPFELVAFGNGHDNPSNSEL 518
Query: 420 VKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVE 479
V+++ V+DA VGDI I+T RTK+ DF+QPY+ +GLV+VAP+ +SA FL+PFT +
Sbjct: 519 VRLITTGVYDAGVGDITIITERTKMADFTQPYVESGLVVVAPVRKLGSSAMAFLRPFTPQ 578
Query: 480 MWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLGR 539
MW + AASF+++ VIW LEH+ ND+FRGPPRRQ+ T F FSFSTLF +++E T S+LGR
Sbjct: 579 MWLIAAASFLIVGAVIWCLEHKHNDEFRGPPRRQVITTFWFSFSTLFFSHRETTTSNLGR 638
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLS 599
I SSYTASL+SILTV QLS+ +KGIE+L TN PIGY GSF YL
Sbjct: 639 IVLIIWLFVVLIINSSYTASLTSILTVHQLSSPIKGIETLQTNHDPIGYPQGSFVRDYLI 698
Query: 600 DSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
L I SRL+ L SPE+Y++ALR GP GGVAA+VDE Y++LFLSN+ +FGI+GQ FT
Sbjct: 699 HELNIHVSRLVPLRSPEEYDKALRDGPGKGGVAAVVDERAYIELFLSNRCEFGIVGQEFT 758
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
++GWGFAF R+SPLAV +S AIL+LSENG +Q++ +KW ++ C + + E +L L
Sbjct: 759 KNGWGFAFPRNSPLAVDVSAAILQLSENGDMQRIRDKWLLRKACSLQGAE-IEVDRLELK 817
Query: 720 SFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQMXXXXXXXXXXXXTRYSKAVFNFFD 779
SFWGL+++CG A V+ + M+ Q+ QQ + S + +F
Sbjct: 818 SFWGLFVVCGVACVLALAVYTVLMIRQF----GQQCPEEAEGSIRRRSSP-SARIHSFLS 872
Query: 780 FIDEKEEAIK 789
F+ EKEE K
Sbjct: 873 FVKEKEEDAK 882
>TAIR|locus:2066107 [details] [associations]
symbol:GLR2.7 "glutamate receptor 2.7" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005773 "vacuole" evidence=IDA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0034976 "response
to endoplasmic reticulum stress" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY495450
EMBL:AY072069 EMBL:AY080587 IPI:IPI00533666 PIR:T02742
RefSeq:NP_180476.3 UniGene:At.38520 ProteinModelPortal:Q8LGN0
PaxDb:Q8LGN0 PRIDE:Q8LGN0 EnsemblPlants:AT2G29120.1 GeneID:817460
KEGG:ath:AT2G29120 TAIR:At2g29120 eggNOG:NOG263961
InParanoid:Q8LGN0 OMA:DSENSFR PhylomeDB:Q8LGN0
ProtClustDB:CLSN2683703 Genevestigator:Q8LGN0 Uniprot:Q8LGN0
Length = 952
Score = 1136 (405.0 bits), Expect = 3.1e-115, P = 3.1e-115
Identities = 265/750 (35%), Positives = 411/750 (54%)
Query: 5 VANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDD 64
+A+ +VP ++F+AT P L+++ PYF+R+T DS Q+ A+A ++ +GW+ V+AIYVD+
Sbjct: 122 LADKSQVPTITFSATCPLLTSINSPYFVRATLDDSSQVKAIAAIVKSFGWRNVVAIYVDN 181
Query: 65 DYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPG 124
++G + L++ L+ A V + +P + N I L + RV+VVH+ P G
Sbjct: 182 EFGEGILPLLTDALQDVQAFVVNRCLIPQEANDDQILKELYKLMTMQTRVFVVHMPPTLG 241
Query: 125 LRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDSIPKK 184
R F A+++ MM YVWL TD + L+S + +SL +QGV+G+R H P S K
Sbjct: 242 FRFFQKAREIGMMEEGYVWLLTDGVMNLLKSNER--GSSLENMQGVLGVRSHIPKSKKLK 299
Query: 185 AFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKAT 244
F RW M K +N + L AYD++ A+A +++K N ++ + H +
Sbjct: 300 NFRLRWEKMFPKKGNDEEMNIFALRAYDSITALAMAVEK-TNIKSLRYD--HPIASGN-N 355
Query: 245 RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGY 304
+ L L V G LL+ L F GL+G+ + + + S +DVINI E +G
Sbjct: 356 KTNLGTLGVSRYGPSLLKALSNVRFNGLAGEFELINGQ-LESSVFDVINIIGSEERIIGL 414
Query: 305 WFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPR 364
W +G K KN + S L +L + WPG + P+GW I N + LR+G+P
Sbjct: 415 WRPSNGIV-----NAKSKNTT-SVLGERLGPVIWPGKSKDVPKGWQIPTNGKMLRVGIPV 468
Query: 365 RASFVGFVTEEHD--SHKVQ--GYCIDILLEALKLVPYDVPYKFELFGDGLS-NPSYDGL 419
+ F+ FV + D S+ + GYCI+I LK +PY V K+ F LS + +YD +
Sbjct: 469 KKGFLEFVDAKIDPISNAMTPTGYCIEIFEAVLKKLPYSVIPKYIAF---LSPDENYDEM 525
Query: 420 VKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVE 479
V V +DA VGD+ IV NR+ VDF+ PY +G+ ++ P+ ++K + WVFL+P++++
Sbjct: 526 VYQVYTGAYDAVVGDVTIVANRSLYVDFTLPYTESGVSMMVPLKDNK-NTWVFLRPWSLD 584
Query: 480 MWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLGR 539
+W TA FV I ++WILEHRVN DFRGPP QI T F F+FST+ ++E VS+L R
Sbjct: 585 LWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGTSFWFAFSTMNFAHREKVVSNLAR 644
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLS 599
+ SYTA+L+S TV+ L +V + LI + IGYQ G+F L
Sbjct: 645 FVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKDLIKFNKNIGYQRGTFVRELLK 704
Query: 600 DSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLS-NQTDFGIIGQPF 658
S +S+L GS + + NG + A DE+ Y+++ LS N + + ++ F
Sbjct: 705 -SQGFDESQLKPFGSAVECDELFS----NGTITASFDEVAYIKVILSQNSSKYTMVEPSF 759
Query: 659 TRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCK-EGCPEERRQHSEPHQLR 717
+G+GF F + SPL +S AIL +++ +Q + KWF K CP+ S H L
Sbjct: 760 KTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIENKWFKKPNNCPDLNTSLSSNH-LS 818
Query: 718 LISFWGLYLLCGTITFTAFLVFLLRMVCQY 747
L SFWGL+L+ G +F A L+F+ + ++
Sbjct: 819 LSSFWGLFLIAGIASFLALLIFVANFLYEH 848
>TAIR|locus:2047256 [details] [associations]
symbol:GLR2.2 "glutamate receptor 2.2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:AC007266 GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558
KO:K05387 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 ProtClustDB:CLSN2683132 EMBL:AY072068
IPI:IPI00519275 PIR:B84640 RefSeq:NP_180048.1 UniGene:At.39113
ProteinModelPortal:Q9SHV1 PRIDE:Q9SHV1 EnsemblPlants:AT2G24720.1
GeneID:817008 KEGG:ath:AT2G24720 TAIR:At2g24720 eggNOG:NOG288203
InParanoid:Q9SHV1 OMA:EMPENSN PhylomeDB:Q9SHV1
Genevestigator:Q9SHV1 GermOnline:AT2G24720 Uniprot:Q9SHV1
Length = 920
Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
Identities = 246/740 (33%), Positives = 401/740 (54%)
Query: 4 EVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVD 63
E+ +VP+VS++AT P+L++L+ PYF R+T DS Q+ A+ +I +GW+EV+ +Y+D
Sbjct: 114 EIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYEDSSQVHAIKAIIKLFGWREVVPVYID 173
Query: 64 DDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDP 123
+ +G + L++ L+ ++ Y+ +P+ DI+V L + RV++VH+S
Sbjct: 174 NTFGEGIMPRLTDSLQDINVRIPYRSVIPLNATDQDISVELLKMMNMPTRVFIVHMSSSL 233
Query: 124 GLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDSIPK 183
+F A++L +M YVW+ T+ ++ +N+T + ++GV+G++ + P S
Sbjct: 234 ASTVFIKAKELGLMKPGYVWILTN---GVMDGLRSINETGIEAMEGVLGIKTYIPKSKDL 290
Query: 184 KAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSI-DKFINEHNITFSASHELPDSK 242
+ F SRW ++ LN YGL+AYD A+A +I D IN N+TFS D+
Sbjct: 291 ETFRSRW----KRRFPQMELNVYGLWAYDATTALAMAIEDAGIN--NMTFSNV----DTG 340
Query: 243 ATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRV 302
+L+ L + G LL+ + F GL+G F + + ++++N+ +
Sbjct: 341 KNVSELDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQ-LQPSVFEIVNMIGTGERSI 399
Query: 303 GYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGV 362
G+W +G+G + + + D L++I WPG P+GW I N + LRIGV
Sbjct: 400 GFWTEGNGLVKKLDQEPRSIGTLSTWPD-HLKHIIWPGEAVSVPKGWEIPTNGKKLRIGV 458
Query: 363 PRRASFVGFVTEEHD----SHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPS--Y 416
P+R F V D S V+G+CID ++ +PYDV Y+F F P+ +
Sbjct: 459 PKRIGFTDLVKVTRDPITNSTVVKGFCIDFFEAVIQAMPYDVSYEFFPFEKPNGEPAGNH 518
Query: 417 DGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNH-KASAWVFLKP 475
+ LV V FDA VGD I+ NR+ VDF+ P++ +G+ ++ P+ + K + FLKP
Sbjct: 519 NDLVHQVYLGQFDAVVGDTTILANRSSFVDFTLPFMKSGVGLIVPLKDEVKRDKFSFLKP 578
Query: 476 FTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVS 535
++E+W T F ++ + +W LEHRVN DFRGP Q +T+F F+FST+ +E +S
Sbjct: 579 LSIELWLTTLVFFFLVGISVWTLEHRVNSDFRGPANYQASTIFWFAFSTMVFAPRERVLS 638
Query: 536 SLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAY 595
R +T SYTASL+S+LT QQL+ ++ + SL+ +GYQ SF
Sbjct: 639 FGARSLVVTWYFVLLVLTQSYTASLASLLTSQQLNPTITSMSSLLHRGETVGYQRTSFIL 698
Query: 596 SYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTD-FGII 654
L+++ +S L+ + E+ + L++GP+NGGVAA PYV+LFL + + ++
Sbjct: 699 GKLNET-GFPQSSLVPFDTAEECDELLKKGPKNGGVAAAFLGTPYVRLFLGQYCNTYKMV 757
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCK--EGCPEE-RRQHS 711
+PF G+GF F SPL +S AILK++E+ +L WF K + CP+ S
Sbjct: 758 EEPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAVELEHAWFKKKEQSCPDPVTNPDS 817
Query: 712 EPH----QLRLISFWGLYLL 727
P QL + SFW L+L+
Sbjct: 818 NPTVTAIQLGVGSFWFLFLV 837
>TAIR|locus:2181196 [details] [associations]
symbol:GLR2.1 "glutamate receptor 2.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AF007271 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AK228008 IPI:IPI00532199 PIR:T01809 RefSeq:NP_198062.2
UniGene:At.30826 ProteinModelPortal:O04660 IntAct:O04660
PaxDb:O04660 EnsemblPlants:AT5G27100.1 GeneID:832768
KEGG:ath:AT5G27100 TAIR:At5g27100 eggNOG:NOG323745
InParanoid:O04660 OMA:GWREVAP PhylomeDB:O04660
ProtClustDB:CLSN2683132 Genevestigator:O04660 GermOnline:AT5G27100
Uniprot:O04660
Length = 901
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 256/755 (33%), Positives = 401/755 (53%)
Query: 4 EVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVD 63
E+ +VP+V+++AT P+L++++ YF R+T DS Q+ A+ ++I +GW+EV +YVD
Sbjct: 114 EMGQKSQVPIVTYSATSPSLASIRSQYFFRATYDDSSQVHAIKEIIKLFGWREVAPVYVD 173
Query: 64 DDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDP 123
D +G + L+++L++ ++ Y+ + +I+V L L RV+VVH+
Sbjct: 174 DTFGEGIMPRLTDVLQEINVRIPYRTVISPNATDDEISVELLRMMTLPTRVFVVHLVELL 233
Query: 124 GLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDSIPK 183
R F A ++ +M YVW+ T+ ++ L S MN+T + +QGV+G++ + P S
Sbjct: 234 ASRFFAKATEIGLMKQGYVWILTNTITDVL---SIMNETEIETMQGVLGVKTYVPRSKEL 290
Query: 184 KAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKA 243
+ F SRW+ K + LN YGL+AYD A+A +I++ N+TF D+K
Sbjct: 291 ENFRSRWT----KRFPISDLNVYGLWAYDATTALALAIEE-AGTSNLTFVKM----DAKR 341
Query: 244 TRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVG 303
+L+ L V G LL+ L + F GL+G QF + ++++N++ +G
Sbjct: 342 NVSELQGLGVSQYGPKLLQTLSRVRFQGLAGDFQFINGE-LQPSVFEIVNVNGQGGRTIG 400
Query: 304 YWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVP 363
+W G + K S D +L+ I WPG T P+GW I N + L+IGVP
Sbjct: 401 FWMKEYGLFKNVDQKPASKTTFSSWQD-RLRPIIWPGDTTSVPKGWEIPTNGKRLQIGVP 459
Query: 364 RRASFVGFVTEEHD----SHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGL 419
+F FV D S G+ ID ++ +PYD+ Y F F DG YD L
Sbjct: 460 VNNTFQQFVKATRDPITNSTIFSGFSIDYFEAVIQAIPYDISYDFIPFQDG----GYDAL 515
Query: 420 VKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNH-KASAWVFLKPFTV 478
V V +DA V D I +NR+ VDFS PY +G+ +V P+ + + S+ +FL P T+
Sbjct: 516 VYQVYLGKYDAVVADTTISSNRSMYVDFSLPYTPSGVGLVVPVKDSVRRSSTIFLMPLTL 575
Query: 479 EMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLG 538
+W ++ SF +I +V+W+LEHRVN DF GP + Q++T+F FSFS + +E +S
Sbjct: 576 ALWLISLLSFFIIGLVVWVLEHRVNPDFDGPGQYQLSTIFWFSFSIMVFAPRERVLSFWA 635
Query: 539 RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYL 598
R +T SYTASL+S+LT Q L +V I SL+ +GYQ SF L
Sbjct: 636 RVVVIIWYFLVLVLTQSYTASLASLLTTQHLHPTVTNINSLLAKGESVGYQ-SSFILGRL 694
Query: 599 SDSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTD-FGIIGQP 657
DS ++ L+S GSPE + L +G GGV+A++ E+PYV++FL + + ++ P
Sbjct: 695 RDS-GFSEASLVSYGSPEHCDALLSKGQAEGGVSAVLMEVPYVRIFLGQYCNKYKMVQTP 753
Query: 658 FTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWF--CKEGCPEERRQHSEPH- 714
F G GF F SPL +S AILK+ E+ +L WF E CP+ + +P+
Sbjct: 754 FKVDGLGFVFPIGSPLVADISRAILKVEESNKANQLENAWFKPIDESCPDPLT-NPDPNP 812
Query: 715 -----QLRLISFWGLYLLCGTITFTAFLVFLLRMV 744
QL SFW L+L+ + A L F+ + +
Sbjct: 813 SVSFRQLGFDSFWVLFLVAAIVCTMALLKFVYQFL 847
>TAIR|locus:2066086 [details] [associations]
symbol:GLR2.8 "glutamate receptor 2.8" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828 GO:GO:0071230
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 eggNOG:NOG263961
ProtClustDB:CLSN2683703 EMBL:AJ311495 IPI:IPI00537052 PIR:T02741
RefSeq:NP_180475.2 UniGene:At.13039 ProteinModelPortal:Q9C5V5
EnsemblPlants:AT2G29110.1 GeneID:817459 KEGG:ath:AT2G29110
TAIR:At2g29110 InParanoid:Q9C5V5 OMA:DSEDSIW PhylomeDB:Q9C5V5
Genevestigator:Q9C5V5 GermOnline:AT2G29110 Uniprot:Q9C5V5
Length = 947
Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
Identities = 261/751 (34%), Positives = 398/751 (52%)
Query: 4 EVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVD 63
++AN +VP +SF+AT P L++++ YF+R T DS Q+ A+A + + +GW+ V+AIYVD
Sbjct: 115 KLANKTQVPTISFSATSPLLTSIKSDYFVRGTIDDSYQVKAIAAIFESFGWRSVVAIYVD 174
Query: 64 DDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDP 123
++ G + L + L+ +V + +P + N I L RV+VVH++
Sbjct: 175 NELGEGIMPYLFDALQD--VQVDRSV-IPSEANDDQILKELYKLMTRQTRVFVVHMASRL 231
Query: 124 GLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDSIPK 183
RIF A ++ MM YVWL T+ ++ + + SL + GV+G+R H P S
Sbjct: 232 ASRIFEKATEIGMMEEGYVWLMTNGMTHMMRHIH--HGRSLNTIDGVLGVRSHVPKSKGL 289
Query: 184 KAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDS 241
+ F RW ++ + L+ +GL+AYD+ A+A +++K NI+ + S
Sbjct: 290 EDFRLRWKRNFKKENPWLRDDLSIFGLWAYDSTTALAMAVEKT----NISSFPYNNASGS 345
Query: 242 KATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQ-DRNIVSRGYDVINIDKMEIH 300
L L V G LL L + F GL+G+ FN DR + S +++IN E
Sbjct: 346 SNNMTDLGTLHVSRYGPSLLEALSEIRFNGLAGR--FNLIDRQLESPKFEIINFVGNEER 403
Query: 301 RVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRI 360
VG+W +G + N + S + + WPG T P+GW I N + +++
Sbjct: 404 IVGFWTPSNGLVNV------NSNKTTSFTGERFGPLIWPGKSTIVPKGWEIPTNGKKIKV 457
Query: 361 GVPRRASFVGFVTEEHDS----HKVQGYCIDILLEALKLVPYDV-P--YKFELFGDGLSN 413
GVP + F FV D +GY IDI ALK +PY V P Y+FE D
Sbjct: 458 GVPVKKGFFNFVEVITDPITNITTPKGYAIDIFEAALKKLPYSVIPQYYRFESPDD---- 513
Query: 414 PSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPI-NNHKASAWVF 472
YD LV V N DA VGD+ I R+ DF+ PY +G+ ++ P+ +N + WVF
Sbjct: 514 -DYDDLVYKVDNGTLDAVVGDVTITAYRSLYADFTLPYTESGVSMMVPVRDNENKNTWVF 572
Query: 473 LKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEA 532
LKP+ +++W TA FV+I V+W+ EHRVN DFRGPP QI T F FSFST+ ++E
Sbjct: 573 LKPWGLDLWVTTACFFVLIGFVVWLFEHRVNTDFRGPPHHQIGTSFWFSFSTMVFAHREK 632
Query: 533 TVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGS 592
VS+L R +T SYTA+L+S LTVQ+ + ++ LI N +GYQ G+
Sbjct: 633 VVSNLARFVVVVWCFVVLVLTQSYTANLTSFLTVQRFQPAAINVKDLIKNGDYVGYQHGA 692
Query: 593 FAYSYL-SDSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQ-TD 650
F +L + + S+L GS E+ L NG ++A DE+ Y++ LS +
Sbjct: 693 FVKDFLIKEGFNV--SKLKPFGSSEECHALLS----NGSISAAFDEVAYLRAILSQYCSK 746
Query: 651 FGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQ 709
+ I+ F +G+GFAF R+SPL +S AIL +++ +Q + KWF K+ CP+ +
Sbjct: 747 YAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTA 806
Query: 710 HSEPHQLRLISFWGLYLLCGTITFTAFLVFL 740
S ++L L SFWGL+L+ G +F A L+F+
Sbjct: 807 LSS-NRLSLRSFWGLFLIAGIASFLALLIFV 836
>TAIR|locus:2047251 [details] [associations]
symbol:GLR2.3 "glutamate receptor 2.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 EMBL:AC007266 GO:GO:0071230
eggNOG:COG0683 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
ProtClustDB:CLSN2683132 IPI:IPI00526740 PIR:A84640
RefSeq:NP_180047.1 UniGene:At.52897 ProteinModelPortal:Q9SHV2
PaxDb:Q9SHV2 PRIDE:Q9SHV2 EnsemblPlants:AT2G24710.1 GeneID:817007
KEGG:ath:AT2G24710 TAIR:At2g24710 InParanoid:Q9SHV2 OMA:QASTICW
PhylomeDB:Q9SHV2 Genevestigator:Q9SHV2 GermOnline:AT2G24710
Uniprot:Q9SHV2
Length = 895
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 240/746 (32%), Positives = 405/746 (54%)
Query: 4 EVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVD 63
E+ +VP+VS++AT P L++L+ PYF+R+T DS Q+ + +I +GW+EV+ +Y+D
Sbjct: 113 EIGQKSRVPIVSYSATSPILTSLRSPYFLRATYEDSFQVQPIKAIIKLFGWREVVPVYID 172
Query: 64 DDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDP 123
+ +G + L++ L+ ++ Y+ + + H+I+V L + RV++VH+ D
Sbjct: 173 NTFGEGIMPRLTDALQDINVRIPYRSVIAINATDHEISVELLKMMNMPTRVFLVHMYYDL 232
Query: 124 GLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDSIPK 183
R F A++L +M YVW+ T+ ++ S +N+T++ ++GV+G++ + P S
Sbjct: 233 ASRFFIKAKELGLMEPGYVWILTN---GVIDDLSLINETAVEAMEGVLGIKTYIPKSPDL 289
Query: 184 KAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKA 243
+ F SRW + + L+ YGL+AYD A+A +I++ +N+TFS ++ D+
Sbjct: 290 EKFRSRWRSLFPR----VELSVYGLWAYDATTALAVAIEE-AGTNNMTFS---KVVDTGR 341
Query: 244 TRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVG 303
+LE L + G LL+ LL F GL+G+ +F + + + ++++NI +G
Sbjct: 342 NVSELEALGLSQFGPKLLQTLLTVQFRGLAGEFRFFRGQ-LQPSVFEIVNIINTGEKSIG 400
Query: 304 YWFDGSGFSVLPPETLKGKNVSHSQLD-WK--LQNITWPGGKTETPRGWVIADNARPLRI 360
+W +G+G + L + S S L WK L++I WPG P+GW I + LRI
Sbjct: 401 FWKEGNGLV----KKLDQQASSISALSTWKDHLKHIVWPGEADSVPKGWQIPTKGKKLRI 456
Query: 361 GVPRRASFVGFVTEEHD----SHKVQGYCIDILLEALKLVPYDVPYKFELFG--DGLSNP 414
GVP+R + V D S V G+CID ++ +PYDV Y+F F DG +
Sbjct: 457 GVPKRTGYTDLVKVTRDPITNSTVVTGFCIDFFEAVIRELPYDVSYEFIPFEKPDGKTAG 516
Query: 415 SYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNH-KASAWVFL 473
+Y+ LV V +DA VGD I+ NR+ VDF+ P+I +G+ ++ + + K +F+
Sbjct: 517 NYNDLVYQVYLGRYDAVVGDTTILVNRSSYVDFTFPFIKSGVGLIVEMTDPVKRDYILFM 576
Query: 474 KPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEAT 533
KP + ++W + SF ++ +W+LE++ N DF GPPR Q +T+ F+FST+ +E
Sbjct: 577 KPLSWKLWLTSFISFFLVGCTVWVLEYKRNPDFSGPPRFQASTICWFAFSTMVFAPRERV 636
Query: 534 VSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSF 593
S R +T SYTASL+S+LT Q+L+ ++ + SL+ +GYQ SF
Sbjct: 637 FSFWARALVIAWYFLVLVLTQSYTASLASLLTSQKLNPTITSMSSLLEKGETVGYQRTSF 696
Query: 594 AYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTD-FG 652
L + +S L+ + E+ + L +GP+ GGV+ E+PY++LFL + +
Sbjct: 697 ILGKLKER-GFPQSSLVPFDTAEECDELLSKGPKKGGVSGAFLEIPYLRLFLGQFCNTYK 755
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCK--EGCPEE-RRQ 709
++ +PF G+GF F SPL +S AILK++E+ +L WF K + CP+
Sbjct: 756 MVEEPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAMELERAWFKKKEQSCPDPITNP 815
Query: 710 HSEP----HQLRLISFWGLYLLCGTI 731
P QL + SF L+L G +
Sbjct: 816 DPNPSFTSRQLDIDSF--LFLFVGVL 839
>TAIR|locus:2066148 [details] [associations]
symbol:GLR2.9 "glutamate receptor 2.9" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
eggNOG:NOG263961 ProtClustDB:CLSN2683703 IPI:IPI00520184 PIR:T02740
RefSeq:NP_180474.1 UniGene:At.52963 ProteinModelPortal:O81078
IntAct:O81078 PaxDb:O81078 PRIDE:O81078 EnsemblPlants:AT2G29100.1
GeneID:817458 KEGG:ath:AT2G29100 TAIR:At2g29100 InParanoid:O81078
OMA:WIFTESA PhylomeDB:O81078 Genevestigator:O81078
GermOnline:AT2G29100 Uniprot:O81078
Length = 940
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 222/637 (34%), Positives = 335/637 (52%)
Query: 113 RVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVG 172
RV+VVH+ LR+F A+ + MM YVWL T+ ++ + + N SL ++GV+G
Sbjct: 218 RVFVVHMESSLALRVFQIARDIGMMEEGYVWLMTNGMTHMMRHIN--NGRSLNTIEGVLG 275
Query: 173 LRQHTPDSIPKKAFLSRWSGMQQKGLVSA--GLNTYGLYAYDTVWAVARSIDKFINEHNI 230
+R H P S F RW +K S LN + L+AYD++ A+A++++K N ++
Sbjct: 276 VRSHVPKSKELGDFRLRWKRTFEKENPSMRDDLNVFALWAYDSITALAKAVEK-ANTKSL 334
Query: 231 TFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYD 290
+ L SK R L + V G L + + F GL+G+ + D + S ++
Sbjct: 335 WYDNGSTL--SK-NRTDLGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLI-DGQLQSPKFE 390
Query: 291 VINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWV 350
+IN E +G+W G L T K L + WPG P+GW
Sbjct: 391 IINFVGNEERIIGFWTPRDG---LMDATSSNKKT--------LGPVIWPGKSKIVPKGWE 439
Query: 351 IADNARPLRIGVPRRASFVGFV--TEEHDSHKVQ--GYCIDILLEALKLVPYDVPYKFEL 406
I + LR+GVP + F FV T ++K GY I+I ALK +PY V ++
Sbjct: 440 IP--GKKLRVGVPMKKGFFDFVKVTINPITNKKTPTGYAIEIFEAALKELPYLVIPEYVS 497
Query: 407 FGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPI-NNH 465
F S +Y+ LV V + +DA VGDI I NR+ DF+ P+ +G+ ++ P+ +N
Sbjct: 498 FE---SPNNYNNLVYQVYDKTWDAVVGDITITANRSLYADFTLPFTESGVSMMVPVRDNE 554
Query: 466 KASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTL 525
WVFL+P+++E+W T FV I V+W+ EHRVN DFRGPP+ QI T FSFST+
Sbjct: 555 NKDTWVFLEPWSLELWVTTGCFFVFIGFVVWLFEHRVNTDFRGPPQYQIGTSLWFSFSTM 614
Query: 526 FKTNQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWP 585
++E VS+L R +T SYTASL+S LTVQ L +V + LI N
Sbjct: 615 VFAHRENVVSNLARFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVNDLIKNRDC 674
Query: 586 IGYQVGSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFL 645
+GYQ G+F L L + +L S +D + L +G ++ G+AA DE+ Y++ L
Sbjct: 675 VGYQGGAFVKDILL-GLGFHEDQLKPFDSAKDADDLLSKG-KSKGIAAAFDEVAYLKAIL 732
Query: 646 SNQTDFGIIGQP-FTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG-C 703
S ++ +P F G+GFAF ++SPL S AIL L++N + Q++ ++WF K+ C
Sbjct: 733 SQSCSKYVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIEDRWFPKKNDC 792
Query: 704 PEERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFL 740
P+ S ++L L SF GL+L+ GT + LVF+
Sbjct: 793 PDPMTALSS-NRLNLSSFLGLFLIAGTAISFSLLVFV 828
Score = 387 (141.3 bits), Expect = 7.2e-32, Sum P(2) = 7.2e-32
Identities = 96/309 (31%), Positives = 162/309 (52%)
Query: 4 EVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVD 63
++AN +VP ++F+AT P L++++ PYF+R+T DS Q+ A+A + F+ W+ V+AIYVD
Sbjct: 112 KLANKTQVPTITFSATSPLLTSIKSPYFVRATIDDSSQVRAIASIFKFFRWRRVVAIYVD 171
Query: 64 DDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDP 123
+++G + L + L+ K S +P + +I L RV+VVH+
Sbjct: 172 NEFGEGFMPFLFDALQDVEVKRSV---IPPEAIDDEIQKELRKLMERQARVFVVHMESSL 228
Query: 124 GLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDSIPK 183
LR+F A+ + MM YVWL T+ ++ + + N SL ++GV+G+R H P S
Sbjct: 229 ALRVFQIARDIGMMEEGYVWLMTNGMTHMMRHIN--NGRSLNTIEGVLGVRSHVPKSKEL 286
Query: 184 KAFLSRWSGMQQKGLVSA--GLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDS 241
F RW +K S LN + L+AYD++ A+A++++K N ++ + L S
Sbjct: 287 GDFRLRWKRTFEKENPSMRDDLNVFALWAYDSITALAKAVEK-ANTKSLWYDNGSTL--S 343
Query: 242 KATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHR 301
K R L + V G L + + F GL+G+ + D + S +++IN E
Sbjct: 344 K-NRTDLGNVGVSLYGPSLQKAFSEVRFNGLAGEFKLI-DGQLQSPKFEIINFVGNEERI 401
Query: 302 VGYWFDGSG 310
+G+W G
Sbjct: 402 IGFWTPRDG 410
Score = 44 (20.5 bits), Expect = 7.2e-32, Sum P(2) = 7.2e-32
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 484 TAASF-VMIAVVIWILEHR--VNDDFRGPPRRQIATMF 518
TA SF +++ V +++ EHR + DD R++ +F
Sbjct: 818 TAISFSLLVFVALFLYEHRHTLGDDSEDSLWRKLKFLF 855
>TAIR|locus:2166006 [details] [associations]
symbol:GLR1.3 "glutamate receptor 1.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 ProtClustDB:CLSN2684267
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AY091121 EMBL:AY142599 IPI:IPI00522082 RefSeq:NP_199652.1
UniGene:At.66754 UniGene:At.70447 ProteinModelPortal:Q9FH75
PRIDE:Q9FH75 EnsemblPlants:AT5G48410.1 GeneID:834896
KEGG:ath:AT5G48410 TAIR:At5g48410 eggNOG:NOG270167
InParanoid:Q9FH75 OMA:FRASISP PhylomeDB:Q9FH75
Genevestigator:Q9FH75 GermOnline:AT5G48410 Uniprot:Q9FH75
Length = 860
Score = 580 (209.2 bits), Expect = 2.2e-79, Sum P(2) = 2.2e-79
Identities = 157/492 (31%), Positives = 257/492 (52%)
Query: 260 LLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETL 319
LL ++ +T F GLSG Q N D+ ++S +++IN+ RVG+ FS
Sbjct: 351 LLEEITKTRFNGLSGDFQLN-DKKLLSNKFEIINMIGSSERRVGFLNSNGSFS-----NR 404
Query: 320 KGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARP-LRIGVPRRASFVGFVTEEHD- 377
+ + +H+ KL+ I WPGG ++P+G + D+ R LR+ V F + E D
Sbjct: 405 RHLSSTHN----KLETIIWPGGSAQSPKGTSLIDSDRKKLRVLVTSSNRFPRLMKVETDP 460
Query: 378 -SHK--VQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGD 434
+++ V+G+CI++ ++ Y+V Y L G N +Y L D +DAAVGD
Sbjct: 461 VTNELIVEGFCIEVFRASISPFNYEVEYIPWLNGSNYDNLAY-ALHSQ--KDKYDAAVGD 517
Query: 435 IAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVV 494
I I +NR+ VDF+ P+ GL IVA + S WVF +P T ++W +A FV+ V+
Sbjct: 518 ITITSNRSTYVDFTLPFTEMGLGIVAV---KERSMWVFFQPLTPDLWITSAFFFVLTGVI 574
Query: 495 IWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLGRXXXXXXXXXXXXITS 554
+W++E N +F+G +QI + F FSTL ++E +L R +T+
Sbjct: 575 VWLIERAENKEFQGSWPQQIGVVLWFGFSTLVYAHREKLKHNLSRFVVTVWVFAVLILTA 634
Query: 555 SYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRIQKSRLISLGS 614
SYTA+L+S++TVQQ+ + +N+ +G+ GS + S ++ R + L S
Sbjct: 635 SYTATLTSMMTVQQIRFN--------SNEDYVGHLSGSLIANVALTSSSLRAMRSLGLNS 686
Query: 615 PEDYERALRQGPRNGGVAAIVDELPYVQLFLS-NQTDFGIIGQPFTRSGWGFAFQRDSPL 673
DY +AL N V+ +VDELPY+++ L N T F ++ T +G+GF FQ+ L
Sbjct: 687 AADYAQALL----NKTVSFVVDELPYLKVVLGENPTHFFMVKTQSTTNGFGFMFQKGFEL 742
Query: 674 AVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLLCGTITF 733
+S I KL + L ++ ++WF + P S P + L F GL+++ G ++F
Sbjct: 743 VPNVSREISKLRTSEKLNEMEKRWFDNQ-LPYTTDDTSNP--ITLYRFRGLFIIIG-VSF 798
Query: 734 TAFLVFLLRMVC 745
AF + +L ++C
Sbjct: 799 -AFALAVLVILC 809
Score = 243 (90.6 bits), Expect = 2.2e-79, Sum P(2) = 2.2e-79
Identities = 60/244 (24%), Positives = 122/244 (50%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
++ E+ +VP++S + +LS ++ + I++T + + + I+ + W V +
Sbjct: 121 LLGELGEKARVPMISLDSPF-SLSLSKYTHLIQATHDSTSEAKGITSFINVFDWNSVALV 179
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS 120
Y D D R + L +N +V K+ V ++ + L K LG V+VVH+S
Sbjct: 180 YEDHDDWRESMQLLVEHFHENGVRVQSKVGFTVSSSEDFVMGRLQQLKDLGTTVFVVHLS 239
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSK-MNQTSLRILQGVVGLRQHTPD 179
+F A++L +M + +VW+ T + T+ SF + ++ + + ++GVVG + + P
Sbjct: 240 EVIATHLFPCARRLGLMGDGFVWILT---AKTMNSFHENIDDFTKQAMEGVVGFKSYIPM 296
Query: 180 SIPKKAFLSRW-SGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHEL 238
SI + F RW + + L+ G++A+D +A+AR+ + I N+T + E+
Sbjct: 297 SIELQNFTLRWRKSLPVEEAELTRLSISGIWAHDIAFALARAAE-VIRMPNVTSTLLEEI 355
Query: 239 PDSK 242
++
Sbjct: 356 TKTR 359
>TAIR|locus:2079681 [details] [associations]
symbol:GLR1.4 "glutamate receptor 1.4" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005261 "cation channel activity"
evidence=IDA] [GO:0005262 "calcium channel activity" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=IDA] [GO:0030003
"cellular cation homeostasis" evidence=RCA;IDA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC009853 GO:GO:0030003
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072066 EMBL:AY072067
IPI:IPI00529459 RefSeq:NP_187408.2 UniGene:At.40336
ProteinModelPortal:Q8LGN1 STRING:Q8LGN1 PaxDb:Q8LGN1 PRIDE:Q8LGN1
EnsemblPlants:AT3G07520.1 GeneID:819940 KEGG:ath:AT3G07520
TAIR:At3g07520 eggNOG:NOG295667 InParanoid:Q8LGN1 OMA:NENIGFF
PhylomeDB:Q8LGN1 ArrayExpress:Q8LGN1 Genevestigator:Q8LGN1
GermOnline:AT3G07520 Uniprot:Q8LGN1
Length = 861
Score = 559 (201.8 bits), Expect = 8.0e-78, Sum P(2) = 8.0e-78
Identities = 157/553 (28%), Positives = 278/553 (50%)
Query: 205 TYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDS--KATRV-QLEQLKVFDGGTFLL 261
T L+ + W + +++ + ++ +H++ S +A V +L L V+D LL
Sbjct: 301 TEELHNFTLRWKRSLRLEEVVTRMSVCSIWAHDIAWSLARAAEVAKLPGLSVYD----LL 356
Query: 262 RKLLQT-NFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLK 320
+ ++ GLSG ++F D+ +S ++++N+ VG W GS S +
Sbjct: 357 EAIPESAKHKGLSGDIKFI-DKKFISDKFEIVNMIGRGERSVGLWNSGSFISN------R 409
Query: 321 GKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNA----RPLRIGVPRRASFVGFVTEEH 376
+ +S ++ L+ I WPGG T P+ + + + LR+ VP + + E
Sbjct: 410 RRRLSSTKA---LETIIWPGGSTRIPKIRSLKEKRHGKKKKLRVLVPA-GNITPQILEVK 465
Query: 377 DSHKV-----QGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVAN--DVFD 429
K GYCID+ ++P++ ++ + ++ +Y+ LV + + D +D
Sbjct: 466 TDFKTGVTAATGYCIDVF--ETSILPFNYEVEYIPWPGAINYKNYNDLVYTLYSQKDKYD 523
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AAVGDI I NR+ VDF+ P+ GL +V + S W+ KP T+ +W A+ F+
Sbjct: 524 AAVGDITITDNRSLYVDFTLPFTDMGLAVVTAKDK---SMWIIFKPLTLSLWLTIASFFI 580
Query: 490 MIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLGRXXXXXXXXXX 549
+ ++W++E N DF+G +QI T+ F FSTL ++E ++ R
Sbjct: 581 LTGAIVWLIERHDNADFQGSCFQQIGTLLCFGFSTLVFAHRERLQHNMSRFVVIVWIFAV 640
Query: 550 XXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRIQKSRL 609
+TS+YTA+L+S++TVQQ ++G++S N+ IG+ S A + ++D+ Q R
Sbjct: 641 LILTSNYTATLTSVMTVQQ----IRGLKS---NE-NIGFFSASIAANVVNDNPTFQGPRY 692
Query: 610 ISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQ-TDFGIIGQPFTRSGWGFAFQ 668
L + +D+ ALR NG ++ IVDE+PYV+LF++ ++F I+ +G+GFAFQ
Sbjct: 693 KGLKTADDFTNALR----NGTISFIVDEVPYVKLFVAKHPSEFVIVETESVTNGFGFAFQ 748
Query: 669 RDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLLC 728
+ SPL +S I KL L+ + WF ++ H L + +F GL+++
Sbjct: 749 KGSPLVQKVSREIEKLRRTEKLKAIENWWFQRQ--TTSATSEDTFHPLTVYTFRGLFMIT 806
Query: 729 GTITFTAFLVFLL 741
G A +V+L+
Sbjct: 807 GVSFAFALIVYLI 819
Score = 278 (102.9 bits), Expect = 8.0e-78, Sum P(2) = 8.0e-78
Identities = 60/221 (27%), Positives = 107/221 (48%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
++E+ KVP++S +LS ++ YFI++T S + +A L + W+ + IY
Sbjct: 126 LAELGEKTKVPVISSFQVPSSLSLAKYNYFIQATHDTSSEAKGIAALFSNFDWRTAVLIY 185
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSP 121
DDD R I L ++N + YK V N+ I L K G R++V H+S
Sbjct: 186 EDDDDWRESIQPLVGHFQQNAIHIEYKAEFSVSSNEECIMKQLRKFKASGIRIFVAHISE 245
Query: 122 DPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPDSI 181
R+F A++L MM Y W+ T + ++ +F N + ++GV+G + + P +
Sbjct: 246 RIANRLFPCARRLGMMEEGYAWILT---ARSMNNFQDTNYLAKEEMEGVIGFKSYIPLTE 302
Query: 182 PKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSID 222
F RW + V ++ ++A+D W++AR+ +
Sbjct: 303 ELHNFTLRWKRSLRLEEVVTRMSVCSIWAHDIAWSLARAAE 343
>TAIR|locus:2166001 [details] [associations]
symbol:ATGLR1.2 species:3702 "Arabidopsis thaliana"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005217
"intracellular ligand-gated ion channel activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006865 "amino acid transport" evidence=RCA] [GO:0016036
"cellular response to phosphate starvation" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
[GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0042631
"cellular response to water deprivation" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072064 EMBL:AY072065
IPI:IPI00536526 IPI:IPI00547562 RefSeq:NP_199651.1
RefSeq:NP_851155.1 UniGene:At.29852 ProteinModelPortal:Q9LV72
IntAct:Q9LV72 PRIDE:Q9LV72 EnsemblPlants:AT5G48400.2 GeneID:834895
KEGG:ath:AT5G48400 TAIR:At5g48400 eggNOG:NOG313824
InParanoid:Q9LV72 OMA:FNANEDY PhylomeDB:Q9LV72
Genevestigator:Q9LV72 GermOnline:AT5G48400 Uniprot:Q9LV72
Length = 867
Score = 572 (206.4 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 160/515 (31%), Positives = 266/515 (51%)
Query: 235 SHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINI 294
+H++ S A+ ++ ++ + LL + ++ F GLSG Q + D ++S ++++N+
Sbjct: 330 AHDVAWSLASAAEVTRMPTVT--STLLEAIKESRFKGLSGNFQLD-DMKLLSDKFEIVNM 386
Query: 295 DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADN 354
RVG+W FS + +S + D L+ I WPGG ++P+G + ++
Sbjct: 387 IGSGERRVGFWNSNGSFS-------NRRQLSSTH-D-NLETIIWPGGSAQSPKGRSLRES 437
Query: 355 ARP-LRIGVPRRASFVGFVTEEHD--SHK---VQGYCIDILLEALKLVPYDVPYKFELFG 408
R LR+ V F + E D +H+ V+G+CI++ ++ Y+V Y L G
Sbjct: 438 GRKKLRVLVTSSNRFPRLMKVETDPITHEITIVEGFCIEVFQASIAPFNYEVEYIRWLNG 497
Query: 409 DGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKAS 468
+ +Y L D +DAAVGDI I ++R+ VDF+ PY GL IVA + S
Sbjct: 498 TNYTKLAY-ALHSQ--KDKYDAAVGDITITSDRSMYVDFTLPYTEMGLGIVAA---KERS 551
Query: 469 AWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKT 528
WVF +P T +W +AA FV+ +++W++E N +F+G +QI + F FSTL
Sbjct: 552 MWVFFQPLTPNLWITSAAFFVLTGIIVWLIERAENKEFQGSWPQQIGVVIWFGFSTLVYA 611
Query: 529 NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY 588
++E +L R + +SYTA+L+S++TVQQ+ + D+ +G+
Sbjct: 612 HREKLQHNLSRFVVTVWVFAVLILVTSYTATLTSMMTVQQIRFNAN-------EDY-VGH 663
Query: 589 QVGSF-AYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLS- 646
GS A + L++S ++ RL+ L + EDY +AL N V+ IV ELPY+++ L
Sbjct: 664 LSGSLIANAALTNS-SLRAMRLLGLNTSEDYAQALM----NKSVSYIVSELPYLKILLGE 718
Query: 647 NQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEE 706
N F ++ T +G+GF FQ+ S LA +S I KL + L ++ +WF K+ P
Sbjct: 719 NPGHFLMVKTQSTTNGFGFMFQKGSELAPNVSREIAKLRTSERLNEMERRWFDKQ-LPYT 777
Query: 707 RRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFLL 741
S P + L F GL+++ G ++F L LL
Sbjct: 778 TDDTSNP--ITLYRFRGLFMITG-VSFAFALAVLL 809
Score = 210 (79.0 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
Identities = 54/228 (23%), Positives = 108/228 (47%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+++E+ +VP++S + +LS ++ + I++T + + ++ + + + W V +
Sbjct: 119 LLAELGEKARVPVISLNSP-MSLSLSKYTHLIQATHNSASEVKGITAFLHGFDWNSVALV 177
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS 120
D D R + + + +N V K+ V ++ + L K LG V+VVH+S
Sbjct: 178 LEDHDDWRESMHFMVDHFHENNVHVQSKVAFSVTSSEDSLMDRLRELKDLGTTVFVVHLS 237
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSK--MNQTSLRILQGVVGLRQHTP 178
R+F A+KL MM + W+ T S ++ SF ++ + ++GVVG + + P
Sbjct: 238 EVIATRLFPCAEKLGMMGEGFAWILT---SRSMSSFHDQFIDDLTKEAMEGVVGFKSYIP 294
Query: 179 DSIPKKAFLSRWSGM----QQKGLVSAGLNTYGLYAYDTVWAVARSID 222
S F RW + G L+ G++A+D W++A + +
Sbjct: 295 MSKELHNFTLRWRKTLPVEEVTGSEITRLSISGVWAHDVAWSLASAAE 342
>TAIR|locus:2102975 [details] [associations]
symbol:GLR1.1 "glutamate receptor 1.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0005261
"cation channel activity" evidence=IDA] [GO:0005262 "calcium
channel activity" evidence=IDA] [GO:0005267 "potassium channel
activity" evidence=IDA] [GO:0005272 "sodium channel activity"
evidence=IDA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0006814 "sodium ion transport" evidence=IDA] [GO:0006816
"calcium ion transport" evidence=IDA] [GO:0030003 "cellular cation
homeostasis" evidence=RCA;IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0006569 "tryptophan catabolic
process" evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic
process" evidence=RCA] [GO:0070838 "divalent metal ion transport"
evidence=RCA] [GO:0009416 "response to light stimulus"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009738
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0005267 GO:GO:0005272 InterPro:IPR001828 EMBL:AC016829
GO:GO:0071230 GO:GO:0030003 GO:GO:0005234 EMBL:AF079998
EMBL:AK117584 IPI:IPI00529222 PIR:T51138 RefSeq:NP_187061.1
UniGene:At.18800 ProteinModelPortal:Q9M8W7 STRING:Q9M8W7
TCDB:1.A.10.1.7 EnsemblPlants:AT3G04110.1 GeneID:819566
KEGG:ath:AT3G04110 GeneFarm:2528 TAIR:At3g04110 eggNOG:NOG253648
HOGENOM:HOG000239558 InParanoid:Q9M8W7 KO:K05387 OMA:IRFSENE
PhylomeDB:Q9M8W7 ProtClustDB:CLSN2684267 Genevestigator:Q9M8W7
GermOnline:AT3G04110 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 Uniprot:Q9M8W7
Length = 808
Score = 292 (107.8 bits), Expect = 2.8e-44, Sum P(3) = 2.8e-44
Identities = 69/242 (28%), Positives = 117/242 (48%)
Query: 334 QNITWPGGKTETPRGWVIADNA--RPLRIGVPRRASFVGFVTEEHDS----HKVQGYCID 387
+ I WPG + PR V+A+ + LR+ V V+ D + V G+C++
Sbjct: 397 RQIVWPGRSRKIPRHRVLAEKGEKKVLRVLVTAGNKVPHLVSVRPDPETGVNTVSGFCVE 456
Query: 388 ILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDF 447
+ + P++ +F + N +Y + D +DAAVGDI I +NR+ VDF
Sbjct: 457 VFKTCI--APFNYELEFIPYRGNNDNLAY---LLSTQRDKYDAAVGDITITSNRSLYVDF 511
Query: 448 SQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFR 507
+ PY G+ I+ + W F PF +W + A FV+ +V+W++E VN +F+
Sbjct: 512 TLPYTDIGIGILT-VKKKSQGMWTFFDPFEKSLWLASGAFFVLTGIVVWLVERSVNPEFQ 570
Query: 508 GPPRRQIATMFLFSFSTLFKTNQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQ 567
G +Q++ M F FST+ ++E R +TSSY+A+L+S T+
Sbjct: 571 GSWGQQLSMMLWFGFSTIVFAHREKLQKMSSRFLVIVWVFVVLILTSSYSANLTSTKTIS 630
Query: 568 QL 569
++
Sbjct: 631 RM 632
Score = 168 (64.2 bits), Expect = 2.8e-44, Sum P(3) = 2.8e-44
Identities = 58/227 (25%), Positives = 102/227 (44%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+++ ++ KVP++S + TLS ++ FI+ T + + + LI + K V+ I
Sbjct: 109 LLATISEKAKVPVISTFLPN-TLSLKKYDNFIQWTHDTTSEAKGITSLIQDFSCKSVVVI 167
Query: 61 YVD-DDYGRNGISALSNMLEKNMAKVSYKLPLPVQFN-QHDITVLLNNSKPLGPRVYVVH 118
Y D DD+ + + N +K + ++ V + ++ + L K V+VVH
Sbjct: 168 YEDADDWSESLQILVENFQDKGIY-IARSASFAVSSSGENHMMNQLRKLKVSRASVFVVH 226
Query: 119 VSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTP 178
+S R+F +KL +M + W+ T LE F+ R +QGV+G + + P
Sbjct: 227 MSEILVSRLFQCVEKLGLMEEAFAWILTARTMNYLEHFA-----ITRSMQGVIGFKSYIP 281
Query: 179 DSIPKKAFLSRW-SGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKF 224
S K F SR M GL A+D +A +++KF
Sbjct: 282 VSEEVKNFTSRLRKRMGDDTETEHSSVIIGLRAHDIACILANAVEKF 328
Score = 138 (53.6 bits), Expect = 2.8e-44, Sum P(3) = 2.8e-44
Identities = 32/95 (33%), Positives = 53/95 (55%)
Query: 607 SRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQ-TDFGIIGQPFTRSGWGF 665
++L S+ + E Y + LR G N +++E+PY+ + + N DF + + +G+GF
Sbjct: 649 AKLGSINAVEAYAQLLRDGTLNH----VINEIPYLSILIGNYPNDFVMTDRVTNTNGFGF 704
Query: 666 AFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCK 700
FQ+ S L +S I KL GML+ + +KWF K
Sbjct: 705 MFQKGSDLVPKVSREIAKLRSLGMLKDMEKKWFQK 739
Score = 93 (37.8 bits), Expect = 9.9e-23, Sum P(3) = 9.9e-23
Identities = 36/147 (24%), Positives = 63/147 (42%)
Query: 260 LLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETL 319
LL + + F GLSG +Q + D +S ++++NI + + R+G W GS FS
Sbjct: 344 LLDTIRHSRFKGLSGDIQIS-DNKFISETFEIVNIGREKQRRIGLWSGGS-FSQRRQIVW 401
Query: 320 KGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSH 379
G++ + + G+ + R V A N P + V R G T
Sbjct: 402 PGRSRKIPR-----HRVLAEKGEKKVLRVLVTAGNKVPHLVSV-RPDPETGVNT------ 449
Query: 380 KVQGYCIDILLEALKLVPYD---VPYK 403
V G+C+++ + Y+ +PY+
Sbjct: 450 -VSGFCVEVFKTCIAPFNYELEFIPYR 475
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 127 IFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRIL 167
+F +KLQ M++ ++ + ++ L S N TS + +
Sbjct: 589 VFAHREKLQKMSSRFLVIVWVFVVLILTSSYSANLTSTKTI 629
>UNIPROTKB|A2AVK2 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOVERGEN:HBG052638 UniGene:Hs.558334 HGNC:HGNC:4584 ChiTaRS:GRIN1
IPI:IPI00789973 SMR:A2AVK2 Ensembl:ENST00000350902 UCSC:uc004cli.1
Uniprot:A2AVK2
Length = 909
Score = 238 (88.8 bits), Expect = 3.8e-31, Sum P(4) = 3.8e-31
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 498 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 557
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 558 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 617
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 618 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 672
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 673 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 732
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 733 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 792
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 793 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 849
Query: 755 M 755
+
Sbjct: 850 L 850
Score = 136 (52.9 bits), Expect = 3.8e-31, Sum P(4) = 3.8e-31
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLP 90
F+R+ S Q + +++ Y W +I + DD GR L +LE+ +K L
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVL- 195
Query: 91 LPVQFNQ--HDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
QF+ ++T LL +K L RV ++ S D ++ A L M + YVWL
Sbjct: 196 ---QFDPGTKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 119 (46.9 bits), Expect = 3.1e-18, Sum P(4) = 3.1e-18
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 457 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 514
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 515 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 574
Query: 493 VVIWILE 499
V++++L+
Sbjct: 575 VMLYLLD 581
Score = 82 (33.9 bits), Expect = 3.8e-31, Sum P(4) = 3.8e-31
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 283 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 332
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 333 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 374
Score = 65 (27.9 bits), Expect = 3.8e-31, Sum P(4) = 3.8e-31
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTI 403
Score = 37 (18.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 151 ATLESFSKMNQTSLRILQGVVGLRQH 176
+TL+SF + Q++L +L VGL H
Sbjct: 549 STLDSFMQPFQSTLWLL---VGLSVH 571
>UNIPROTKB|Q05586 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IDA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IMP;IDA] [GO:0016595 "glutamate binding" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0045471 "response to ethanol"
evidence=IDA] [GO:0006812 "cation transport" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042391 "regulation
of membrane potential" evidence=IDA] [GO:0005262 "calcium channel
activity" evidence=IDA] [GO:0005509 "calcium ion binding"
evidence=ISS] [GO:0005516 "calmodulin binding" evidence=ISS]
[GO:0008021 "synaptic vesicle" evidence=ISS] [GO:0008542 "visual
learning" evidence=ISS] [GO:0014069 "postsynaptic density"
evidence=ISS] [GO:0043005 "neuron projection" evidence=ISS]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0055074 "calcium ion homeostasis" evidence=ISS]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0018964 "propylene
metabolic process" evidence=ISS] [GO:2000463 "positive regulation
of excitatory postsynaptic membrane potential" evidence=ISS]
[GO:0043083 "synaptic cleft" evidence=ISS] [GO:0042165
"neurotransmitter binding" evidence=ISS] [GO:0043195 "terminal
bouton" evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0060076 "excitatory synapse" evidence=ISS] [GO:0070588 "calcium
ion transmembrane transport" evidence=IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0045471 GO:GO:0030054 GO:GO:0045211
GO:GO:0008021 GO:GO:0045944 GO:GO:0035235 GO:GO:0008542
GO:GO:0005509 GO:GO:0043195 DrugBank:DB00142 GO:GO:0030288
GO:GO:0005516 GO:GO:0043083 EMBL:AL929554 InterPro:IPR001828
GO:GO:0070588 GO:GO:0055074 GO:GO:0060076 Orphanet:178469 PDB:3BYA
PDBsum:3BYA DrugBank:DB01173 GO:GO:0016595 GO:GO:2000463
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
eggNOG:NOG282132 GO:GO:0016594 KO:K05208 InterPro:IPR018882
Pfam:PF10562 TCDB:1.A.10.1.6 CTD:2902 HOVERGEN:HBG052638
OrthoDB:EOG4CG07J EMBL:L13266 EMBL:L13267 EMBL:L13268 EMBL:D13515
EMBL:L05666 EMBL:AF015730 EMBL:AF015731 EMBL:Z32772 EMBL:Z32773
EMBL:Z32774 EMBL:U08106 EMBL:U08107 EMBL:S57708 IPI:IPI00011989
IPI:IPI00013915 IPI:IPI00335571 IPI:IPI00465228 IPI:IPI00470730
IPI:IPI00470731 IPI:IPI00646891 PIR:A46612 PIR:A47551
RefSeq:NP_000823.4 RefSeq:NP_001172019.1 RefSeq:NP_001172020.1
RefSeq:NP_015566.1 RefSeq:NP_067544.1 UniGene:Hs.558334 PDB:2NR1
PDBsum:2NR1 ProteinModelPortal:Q05586 SMR:Q05586 IntAct:Q05586
MINT:MINT-1900224 STRING:Q05586 PhosphoSite:Q05586 DMDM:548377
PaxDb:Q05586 PRIDE:Q05586 Ensembl:ENST00000315048
Ensembl:ENST00000371546 Ensembl:ENST00000371550
Ensembl:ENST00000371553 Ensembl:ENST00000371559
Ensembl:ENST00000371560 Ensembl:ENST00000371561 GeneID:2902
KEGG:hsa:2902 UCSC:uc004clk.3 UCSC:uc004cll.3 UCSC:uc004clm.3
GeneCards:GC09P140032 HGNC:HGNC:4584 HPA:CAB006831 MIM:138249
MIM:614254 neXtProt:NX_Q05586 PharmGKB:PA28978 OMA:VYRSAAM
PhylomeDB:Q05586 BindingDB:Q05586 ChEMBL:CHEMBL2015 ChiTaRS:GRIN1
EvolutionaryTrace:Q05586 GenomeRNAi:2902 NextBio:11487
PMAP-CutDB:Q5VSF3 ArrayExpress:Q05586 Bgee:Q05586 CleanEx:HS_GRIN1
Genevestigator:Q05586 GermOnline:ENSG00000176884 GO:GO:0018964
Uniprot:Q05586
Length = 938
Score = 238 (88.8 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 498 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 557
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 558 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 617
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 618 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 672
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 673 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 732
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 733 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 792
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 793 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 849
Query: 755 M 755
+
Sbjct: 850 L 850
Score = 136 (52.9 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLP 90
F+R+ S Q + +++ Y W +I + DD GR L +LE+ +K L
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVL- 195
Query: 91 LPVQFNQ--HDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
QF+ ++T LL +K L RV ++ S D ++ A L M + YVWL
Sbjct: 196 ---QFDPGTKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 119 (46.9 bits), Expect = 3.6e-18, Sum P(4) = 3.6e-18
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 457 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 514
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 515 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 574
Query: 493 VVIWILE 499
V++++L+
Sbjct: 575 VMLYLLD 581
Score = 82 (33.9 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 283 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 332
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 333 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 374
Score = 65 (27.9 bits), Expect = 4.5e-31, Sum P(4) = 4.5e-31
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTI 403
Score = 37 (18.1 bits), Expect = 0.00075, Sum P(2) = 0.00074
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 151 ATLESFSKMNQTSLRILQGVVGLRQH 176
+TL+SF + Q++L +L VGL H
Sbjct: 549 STLDSFMQPFQSTLWLL---VGLSVH 571
>RGD|2736 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, N-methyl D-aspartate
1" species:10116 "Rattus norvegicus" [GO:0001661 "conditioned taste
aversion" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] [GO:0001967 "suckling behavior" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEA;ISO] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IDA;TAS]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP;IDA;TAS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO] [GO:0005262 "calcium channel activity"
evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005887 "integral to plasma membrane" evidence=ISO] [GO:0006812
"cation transport" evidence=ISO] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA;ISO] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA;ISO] [GO:0007611 "learning or memory" evidence=ISO;TAS]
[GO:0007612 "learning" evidence=ISO] [GO:0007613 "memory"
evidence=ISO] [GO:0007616 "long-term memory" evidence=IEA;ISO]
[GO:0008021 "synaptic vesicle" evidence=IEA;ISO] [GO:0008306
"associative learning" evidence=ISO] [GO:0008344 "adult locomotory
behavior" evidence=IEA;ISO] [GO:0008355 "olfactory learning"
evidence=IEA;ISO] [GO:0008542 "visual learning" evidence=IEA;ISO]
[GO:0009986 "cell surface" evidence=IEA;ISO] [GO:0010646 "regulation
of cell communication" evidence=ISO] [GO:0010942 "positive regulation
of cell death" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0014075 "response to amine stimulus" evidence=IEP]
[GO:0016020 "membrane" evidence=ISO] [GO:0016594 "glycine binding"
evidence=ISO;IDA] [GO:0016595 "glutamate binding" evidence=ISO;IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA;TAS] [GO:0018964 "propylene metabolic
process" evidence=IEA;ISO] [GO:0019233 "sensory perception of pain"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021586 "pons maturation" evidence=IEA;ISO] [GO:0021987 "cerebral
cortex development" evidence=IEA;ISO] [GO:0022843 "voltage-gated
cation channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032590
"dendrite membrane" evidence=IDA] [GO:0034220 "ion transmembrane
transport" evidence=ISO] [GO:0035176 "social behavior"
evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IDA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0035254 "glutamate
receptor binding" evidence=IPI] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IEA;ISO] [GO:0043523 "regulation of neuron apoptotic
process" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=ISO] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA;ISO]
[GO:0048511 "rhythmic process" evidence=IDA] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=IEA;ISO] [GO:0050770 "regulation
of axonogenesis" evidence=IEA;ISO] [GO:0050905 "neuromuscular
process" evidence=ISO] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051592 "response to calcium ion" evidence=IEP]
[GO:0051963 "regulation of synapse assembly" evidence=IEA;ISO]
[GO:0055074 "calcium ion homeostasis" evidence=ISO] [GO:0060076
"excitatory synapse" evidence=IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060134
"prepulse inhibition" evidence=IEA;ISO] [GO:0060179 "male mating
behavior" evidence=IEA;ISO] [GO:0060992 "response to fungicide"
evidence=IEP] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:2000463 "positive regulation of excitatory
postsynaptic membrane potential" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2736 GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288 GO:GO:0007611
GO:GO:0014070 GO:GO:0043083 GO:GO:0010942 GO:GO:0032590
InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076 GO:GO:0016595
GO:GO:2000463 GO:GO:0071287 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GeneTree:ENSGT00700000104113
GO:GO:0022843 GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562
PDB:2A5T PDBsum:2A5T CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638
OMA:VYRSAAM EMBL:X63255 EMBL:AY157515 EMBL:U08261 EMBL:U08262
EMBL:U08263 EMBL:U08264 EMBL:U08265 EMBL:U08267 EMBL:U08268
EMBL:S39217 EMBL:S39218 EMBL:S39219 EMBL:S39220 EMBL:S39221
EMBL:X65227 IPI:IPI00198625 IPI:IPI00231254 IPI:IPI00231255
IPI:IPI00231256 IPI:IPI00231257 IPI:IPI00231259 IPI:IPI00389747
PIR:JN0336 PIR:JN0337 PIR:JN0338 PIR:JN0339 PIR:JN0340 PIR:JN0341
PIR:JN0342 PIR:S19710 RefSeq:NP_001257531.1 RefSeq:NP_001257532.1
RefSeq:NP_001257534.1 RefSeq:NP_001257537.1 RefSeq:NP_001257539.1
RefSeq:NP_058706.1 UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9
PDB:1PBQ PDB:1Y1M PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8
PDBsum:1PB9 PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20
PDBsum:3Q41 ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N
IntAct:P35439 MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439
PRIDE:P35439 Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408 UCSC:RGD:2736
BindingDB:P35439 ChEMBL:CHEMBL330 EvolutionaryTrace:P35439
NextBio:603223 ArrayExpress:P35439 Genevestigator:P35439
GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 238 (88.8 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 498 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 557
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 558 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 617
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 618 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 672
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 673 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 732
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 733 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 792
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 793 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 849
Query: 755 M 755
+
Sbjct: 850 L 850
Score = 133 (51.9 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLP 90
F+R+ S Q + +++ Y W +I + DD GR L +LE+ +K L
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVL- 195
Query: 91 LPVQFNQ--HDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
QF+ ++T LL ++ L RV ++ S D ++ A L M + YVWL
Sbjct: 196 ---QFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 119 (46.9 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 457 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 514
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 515 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 574
Query: 493 VVIWILE 499
V++++L+
Sbjct: 575 VMLYLLD 581
Score = 82 (33.9 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 283 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 332
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 333 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 374
Score = 65 (27.9 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTI 403
>UNIPROTKB|P35439 [details] [associations]
symbol:Grin1 "Glutamate receptor ionotropic, NMDA 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2736
GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288
GO:GO:0007611 GO:GO:0014070 GO:GO:0043083 GO:GO:0010942
GO:GO:0032590 InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076
GO:GO:0016595 GO:GO:2000463 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0022843 GO:GO:0004972 KO:K05208
InterPro:IPR018882 Pfam:PF10562 PDB:2A5T PDBsum:2A5T CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:X63255
EMBL:AY157515 EMBL:U08261 EMBL:U08262 EMBL:U08263 EMBL:U08264
EMBL:U08265 EMBL:U08267 EMBL:U08268 EMBL:S39217 EMBL:S39218
EMBL:S39219 EMBL:S39220 EMBL:S39221 EMBL:X65227 IPI:IPI00198625
IPI:IPI00231254 IPI:IPI00231255 IPI:IPI00231256 IPI:IPI00231257
IPI:IPI00231259 IPI:IPI00389747 PIR:JN0336 PIR:JN0337 PIR:JN0338
PIR:JN0339 PIR:JN0340 PIR:JN0341 PIR:JN0342 PIR:S19710
RefSeq:NP_001257531.1 RefSeq:NP_001257532.1 RefSeq:NP_001257534.1
RefSeq:NP_001257537.1 RefSeq:NP_001257539.1 RefSeq:NP_058706.1
UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9 PDB:1PBQ PDB:1Y1M
PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8 PDBsum:1PB9
PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20 PDBsum:3Q41
ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N IntAct:P35439
MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439 PRIDE:P35439
Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408
UCSC:RGD:2736 BindingDB:P35439 ChEMBL:CHEMBL330
EvolutionaryTrace:P35439 NextBio:603223 ArrayExpress:P35439
Genevestigator:P35439 GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 238 (88.8 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 498 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 557
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 558 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 617
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 618 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 672
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 673 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 732
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 733 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 792
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 793 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 849
Query: 755 M 755
+
Sbjct: 850 L 850
Score = 133 (51.9 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLP 90
F+R+ S Q + +++ Y W +I + DD GR L +LE+ +K L
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVL- 195
Query: 91 LPVQFNQ--HDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
QF+ ++T LL ++ L RV ++ S D ++ A L M + YVWL
Sbjct: 196 ---QFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 119 (46.9 bits), Expect = 7.6e-18, Sum P(4) = 7.6e-18
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 457 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 514
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 515 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 574
Query: 493 VVIWILE 499
V++++L+
Sbjct: 575 VMLYLLD 581
Score = 82 (33.9 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 283 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 332
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 333 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 374
Score = 65 (27.9 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTI 403
>MGI|MGI:95819 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, NMDA1 (zeta 1)"
species:10090 "Mus musculus" [GO:0001661 "conditioned taste
aversion" evidence=IMP] [GO:0001964 "startle response"
evidence=IMP] [GO:0001967 "suckling behavior" evidence=IMP]
[GO:0001975 "response to amphetamine" evidence=IGI;IMP] [GO:0004872
"receptor activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0005102 "receptor binding" evidence=IPI] [GO:0005215
"transporter activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=IGI] [GO:0005262 "calcium channel activity"
evidence=IGI;IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006812
"cation transport" evidence=ISO;IGI] [GO:0006816 "calcium ion
transport" evidence=IMP;IDA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IMP] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0007611 "learning or memory" evidence=IMP]
[GO:0007612 "learning" evidence=IMP] [GO:0007613 "memory"
evidence=IMP] [GO:0007616 "long-term memory" evidence=IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008306
"associative learning" evidence=IMP] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0008355 "olfactory learning"
evidence=IMP] [GO:0008542 "visual learning" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010646 "regulation of
cell communication" evidence=IMP] [GO:0010942 "positive regulation
of cell death" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IC;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO;IMP] [GO:0016595 "glutamate binding"
evidence=ISO] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISO;IPI] [GO:0018964 "propylene
metabolic process" evidence=IDA] [GO:0019233 "sensory perception of
pain" evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021586 "pons maturation" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0030426 "growth cone" evidence=NAS] [GO:0032590 "dendrite
membrane" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IDA] [GO:0035176 "social behavior" evidence=IMP]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IMP;IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043083 "synaptic cleft" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IMP] [GO:0043523 "regulation of neuron apoptotic process"
evidence=IGI;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IGI;IMP] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=IMP] [GO:0048168 "regulation of neuronal synaptic
plasticity" evidence=IMP] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048511 "rhythmic
process" evidence=ISO] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0050770 "regulation of
axonogenesis" evidence=IMP] [GO:0050905 "neuromuscular process"
evidence=IMP] [GO:0051262 "protein tetramerization" evidence=ISO]
[GO:0051963 "regulation of synapse assembly" evidence=IMP]
[GO:0055074 "calcium ion homeostasis" evidence=IDA] [GO:0060076
"excitatory synapse" evidence=ISO] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060134 "prepulse inhibition" evidence=IMP] [GO:0060179 "male
mating behavior" evidence=IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO;IGI;IDA] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95819 GO:GO:0021987 GO:GO:0008355 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0019233 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0045944
GO:GO:0008344 GO:GO:0001967 GO:GO:0008542 GO:GO:0007616
GO:GO:0005509 GO:GO:0060079 GO:GO:0001975 GO:GO:0043524
GO:GO:0060134 GO:GO:0035249 GO:GO:0030288 GO:GO:0030426
GO:GO:0043065 GO:GO:0005516 GO:GO:0050770 GO:GO:0048814
GO:GO:0007585 GO:GO:0006874 GO:GO:0001661 GO:GO:0051963
GO:GO:0035176 EMBL:AL732309 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GeneTree:ENSGT00700000104113 GO:GO:0060179
GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562 CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 GO:GO:0018964 EMBL:D10028
EMBL:BC039157 IPI:IPI00118385 IPI:IPI00608056 PIR:S21104
RefSeq:NP_001171127.1 RefSeq:NP_001171128.1 RefSeq:NP_032195.1
UniGene:Mm.278672 ProteinModelPortal:P35438 SMR:P35438
DIP:DIP-31577N IntAct:P35438 MINT:MINT-135802 STRING:P35438
PhosphoSite:P35438 PaxDb:P35438 PRIDE:P35438
Ensembl:ENSMUST00000028335 Ensembl:ENSMUST00000114312 GeneID:14810
KEGG:mmu:14810 UCSC:uc008iri.2 UCSC:uc008irk.2 BindingDB:P35438
ChEMBL:CHEMBL2895 NextBio:286995 Bgee:P35438 CleanEx:MM_GRIN1
Genevestigator:P35438 GermOnline:ENSMUSG00000026959 GO:GO:0021586
Uniprot:P35438
Length = 938
Score = 238 (88.8 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 498 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 557
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 558 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 617
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 618 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 672
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 673 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 732
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 733 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 792
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 793 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 849
Query: 755 M 755
+
Sbjct: 850 L 850
Score = 133 (51.9 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLP 90
F+R+ S Q + +++ Y W +I + DD GR L +LE+ +K L
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVL- 195
Query: 91 LPVQFNQ--HDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
QF+ ++T LL ++ L RV ++ S D ++ A L M + YVWL
Sbjct: 196 ---QFDPGTKNVTALLMEARDLEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 118 (46.6 bits), Expect = 9.5e-18, Sum P(4) = 9.5e-18
Identities = 28/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+C+D+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 457 GFCVDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 514
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 515 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 574
Query: 493 VVIWILE 499
V++++L+
Sbjct: 575 VMLYLLD 581
Score = 82 (33.9 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 283 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 332
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 333 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 374
Score = 65 (27.9 bits), Expect = 9.2e-31, Sum P(4) = 9.2e-31
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 377 RKIIWPGGETEKPRGYQMSTRLKIVTI 403
>UNIPROTKB|F1P2J9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00586084
ProteinModelPortal:F1P2J9 Ensembl:ENSGALT00000040369 Uniprot:F1P2J9
Length = 880
Score = 241 (89.9 bits), Expect = 2.4e-30, Sum P(4) = 2.4e-30
Identities = 86/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 411 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 470
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 471 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 530
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 531 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 585
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 586 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 645
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S AILK ENG ++ L + W
Sbjct: 646 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTW 705
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 706 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 762
Query: 755 M 755
+
Sbjct: 763 L 763
Score = 133 (51.9 bits), Expect = 2.4e-30, Sum P(4) = 2.4e-30
Identities = 42/172 (24%), Positives = 73/172 (42%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S A ++P++ S F+R+ S Q +++ + W VI I
Sbjct: 22 VSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILI 81
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQ--HDITVLLNNSKPLGPRVYVVH 118
DD GR L +LE+ +K L QF+ ++T LL +K L RV ++
Sbjct: 82 VSDDHEGRAAQKKLETLLEERESKAEKVL----QFDPGTKNVTSLLLEAKELEARVIILS 137
Query: 119 VSPDPGLRIFTTAQKLQMMTNNYVWLATDW-LSATLESFSKMNQTSLRILQG 169
S D ++ +A L M + YVWL + +S ++ L+++ G
Sbjct: 138 ASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLING 189
Score = 116 (45.9 bits), Expect = 9.0e-17, Sum P(4) = 9.0e-17
Identities = 29/127 (22%), Positives = 66/127 (51%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L+ ++ + Y+ L DG ++N + ++G++ + + D V
Sbjct: 370 GFCIDLLIRLAGVMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 427
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 428 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 487
Query: 493 VVIWILE 499
V++++L+
Sbjct: 488 VMLYLLD 494
Score = 77 (32.2 bits), Expect = 2.4e-30, Sum P(4) = 2.4e-30
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + NIT + P R + ++ G R L+ + ++
Sbjct: 198 DAVAVVAQAVHDLFEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYSE 247
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGS 309
G++G+V+FN+D + Y ++N+ ++ +VG ++GS
Sbjct: 248 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI-YNGS 285
Score = 61 (26.5 bits), Expect = 2.4e-30, Sum P(4) = 2.4e-30
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE P+G+ ++ + + I
Sbjct: 292 RKIIWPGGETEKPQGYQMSTKLKIVTI 318
>UNIPROTKB|F1RYR0 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:VNGQWNG GeneTree:ENSGT00590000083056
EMBL:AEMK01188348 EMBL:CU062538 EMBL:CU407189 EMBL:CU457396
EMBL:CU928568 Ensembl:ENSSSCT00000004819 Uniprot:F1RYR0
Length = 872
Score = 168 (64.2 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL------SNPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG +N ++G+V+ + + D
Sbjct: 417 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDANGQWNGMVRELIDHKAD 474
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 475 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 534
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTN-QEATVSS 536
+ ++ V+ W H N D + F F L + E +
Sbjct: 535 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQEGPELMPKA 594
Query: 537 LG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 595 LFLRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 638
Score = 165 (63.1 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 76/338 (22%), Positives = 141/338 (41%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L VP + +S + +++ S A+ DL+ F+ WK V +Y
Sbjct: 81 VQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY 139
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G+ L +++ A Y L L ++ + D LL K G +V+
Sbjct: 140 -DDS---TGLIRLQELIK---APSRYNLRLKIRQLPADTKDAKPLLKEMKR-GKEFHVIF 191
Query: 119 -VSPDPGLRIFTTAQKLQMMTN--NYVWLATDWLSATLESF--SKMNQTSLRILQGVVGL 173
S + I A + MMT +Y++ D + +E + S +N T RIL
Sbjct: 192 DCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILN----- 246
Query: 174 RQHTP-DSIPKKAFLSRWSGMQQ--KGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNI 230
++T SI +K + R + GL+ + T YD V V+ + +F
Sbjct: 247 TENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVGVQQF------ 300
Query: 231 TFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGY 289
P + +Q + K + GT + + + ++ GL+G++ FN+ +
Sbjct: 301 --------PQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDL 352
Query: 290 DVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
DVI++ + + ++G W SG ++ + K N++ S
Sbjct: 353 DVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDS 390
Score = 122 (48.0 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 52/200 (26%), Positives = 87/200 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGS----FAYSYLS--DSL 602
I SSYTA+L++ LTV+++ + + + L I Y + G+ F S +S D +
Sbjct: 611 IISSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVEDGATMTFFKKSKISTYDKM 669
Query: 603 -RIQKSRLISL---GSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPF 658
SR S+ + E +R L A + E ++ + IG
Sbjct: 670 WAFMSSRRQSVLVKSNEEGIQRVLTSD------YAFLMESTTIEFVTQRNCNLTQIGGLI 723
Query: 659 TRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRL 718
G+G SP ++ AIL+L E G L + EKW+ GCPEE + E L +
Sbjct: 724 DSKGYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--ESKEASALGV 781
Query: 719 ISFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 782 QNIGGIFIVLAAGLVLSVFV 801
Score = 38 (18.4 bits), Expect = 2.6e-15, Sum P(3) = 2.6e-15
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 189 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 232
>ZFIN|ZDB-GENE-051202-2 [details] [associations]
symbol:grin1b "glutamate receptor, ionotropic,
N-methyl D-aspartate 1b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-2
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 KO:K05208
InterPro:IPR018882 Pfam:PF10562 HOGENOM:HOG000231491
HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:BX276128 EMBL:AL831768
IPI:IPI00616850 RefSeq:NP_001137603.1 UniGene:Dr.83363 SMR:Q6ZM67
Ensembl:ENSDART00000034849 GeneID:100005675 KEGG:dre:100005675
CTD:100005675 InParanoid:Q6ZM67 NextBio:20786787 Uniprot:Q6ZM67
Length = 937
Score = 239 (89.2 bits), Expect = 8.4e-28, Sum P(4) = 8.4e-28
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 514 WNGMMGELLSGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 573
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 574 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 633
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 634 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 688
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 689 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 748
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S AIL ENG ++ L + W
Sbjct: 749 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMEDLDKTW 808
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 809 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 865
Query: 755 M 755
+
Sbjct: 866 L 866
Score = 117 (46.2 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + Y+ L DG ++N + ++G++ + + + D V
Sbjct: 473 GFCIDLLIKLAFTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIV 530
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 531 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 590
Query: 493 VVIWILE 499
V++++L+
Sbjct: 591 VMLYLLD 597
Score = 95 (38.5 bits), Expect = 8.4e-28, Sum P(4) = 8.4e-28
Identities = 55/233 (23%), Positives = 95/233 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S A ++P+V S F+R+ S Q D++ + W +I I
Sbjct: 104 VSYTAGFYRIPVVGLTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILI 163
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVY-VVHV 119
DD GR L +LE+ K + N ++ L ++K GP+ V+
Sbjct: 164 VSDDHEGRAAQKRLETLLEERETKSKNR-------NYENLDQLSFDNKR-GPKAEKVLLF 215
Query: 120 SPDPGLR-IFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTP 178
S D L + A++L+ + + D +A + ++N T + +VG R+
Sbjct: 216 SQDTNLTALLQEAKELEARVI-ILSASEDEAAAIYKVARQLNMTGSGYVW-LVGERE--- 270
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNIT 231
+ KA G+ L++ G N + YD V VA+SI + + NIT
Sbjct: 271 --MSGKALSEAPDGLLGLQLIN-GKNE-SAHIYDAVAVVAQSIQELFEKENIT 319
Score = 93 (37.8 bits), Expect = 8.4e-28, Sum P(4) = 8.4e-28
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 209 YAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTN 268
+ YD V VA+SI + + NIT E P R + ++ G R L+ +
Sbjct: 297 HIYDAVAVVAQSIQELFEKENIT-----EPP-----RGCVGNTNIWKTGPLFKRVLMSSK 346
Query: 269 FT-GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGS 309
+ GL+G+V+FN D + Y ++N K + +VG ++GS
Sbjct: 347 YPDGLTGRVEFNDDGDRRFAHYSILNYQKTRLVQVGV-YNGS 387
Score = 62 (26.9 bits), Expect = 8.4e-28, Sum P(4) = 8.4e-28
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE P+G+ ++ + + I
Sbjct: 395 RKIIWPGGETEKPKGYQMSTRLKIVTI 421
>UNIPROTKB|B4GF83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7234 "Drosophila persimilis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH479182 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002017168.1
ProteinModelPortal:B4GF83 EnsemblMetazoa:FBtr0187775 GeneID:6591341
KEGG:dpe:Dper_GL22160 FlyBase:FBgn0159752 Uniprot:B4GF83
Length = 1004
Score = 244 (91.0 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 92/404 (22%), Positives = 183/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N S + GL+ + N+
Sbjct: 478 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYLLRNNSGAMTLRKEWTGLMGELVNER 535
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 536 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 595
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 596 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 655
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 656 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 715
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 716 VDMYFRRQVELSNMYRTMEANNYATAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 774
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 775 TAGELFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 833
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 834 KTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 877
Score = 111 (44.1 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 61/219 (27%), Positives = 91/219 (41%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 311 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 360
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI + + H VG FS N++ S+
Sbjct: 361 ETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGK------FSYDSMRAKMRMNINDSE-- 412
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPLRIGV-P----RRASFVGFVTEEH--------- 376
I WPG + P G +I + + L I P RR F E
Sbjct: 413 -----IIWPGKQNRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNA 467
Query: 377 -DS----HKVQGYCIDILLEALKLVPYDVPYKFELFGDG 410
DS + +GYCID+L+E K + + Y L DG
Sbjct: 468 TDSTANEYCCRGYCIDLLIELSKRINFT--YDLALSPDG 504
Score = 91 (37.1 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 132 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVIII 191
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 192 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 251
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 252 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 282
>UNIPROTKB|B4KD90 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7230 "Drosophila mojavensis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH933806 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001999411.1
ProteinModelPortal:B4KD90 EnsemblMetazoa:FBtr0175219 GeneID:6573325
KEGG:dmo:Dmoj_GI24494 FlyBase:FBgn0147216 InParanoid:B4KD90
Uniprot:B4KD90
Length = 980
Score = 246 (91.7 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 91/404 (22%), Positives = 183/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N + + GL+ + N+
Sbjct: 463 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYILRNNTGAMTLRKEWTGLIGELVNER 520
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 521 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 580
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 581 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAIWFAWGVLLNSGIGEGTPRSFS 640
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 641 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 700
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 701 VDMYFRRQVELSNMYRTMESNNYVTAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 759
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 760 TAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 818
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 819 KTPNTLGLKNMAGVFILVGVGIAGGVCLIIIEVIYKKHQVKKQK 862
Score = 109 (43.4 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 58/215 (26%), Positives = 92/215 (42%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 296 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 345
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGK---NVSHS 327
+GQV F+ + + + GYDVINI D + H VG FS ++LK K ++ S
Sbjct: 346 ETGQVAFDDNGDRIYAGYDVINIRDHQKQHIVGK------FSY---DSLKAKMIMRINDS 396
Query: 328 QLDWKLQNITWPGGKTETPRGWVIADNARPL----RIG------VPRRASFVGFVTEEHD 377
Q+ W + P G V+ +P R+G P F +
Sbjct: 397 QIIWGGKQRRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNASDAT 456
Query: 378 SHKV--QGYCIDILLEALKLVPYDVPYKFELFGDG 410
+++ +GYCID+L+E K + + Y L DG
Sbjct: 457 ANEFCCRGYCIDLLIELSKRINFT--YDLALSPDG 489
Score = 89 (36.4 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 32/151 (21%), Positives = 60/151 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 117 VSYTTGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFLYTKVIII 176
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 177 HSSDTDGRAILGRFQTTSQTYYDDVDARATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 236
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
V+ S + IF A + M +VW+ T+
Sbjct: 237 VYASTEDAQVIFRDAAEYNMTGEGHVWIVTE 267
>UNIPROTKB|Q296F7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0004970
"ionotropic glutamate receptor activity" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007616 "long-term
memory" evidence=ISS] [GO:0008355 "olfactory learning"
evidence=ISS] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISS] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS] [GO:0042391 "regulation
of membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0007616 GO:GO:0042391 EMBL:CM000070 InterPro:IPR001828
GO:GO:0055074 GenomeReviews:CM000070_GR GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HSSP:P19491 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
RefSeq:XP_001359355.1 ProteinModelPortal:Q296F7 GeneID:4802433
KEGG:dpo:Dpse_GA15505 FlyBase:FBgn0075522 InParanoid:Q296F7
Uniprot:Q296F7
Length = 1004
Score = 242 (90.2 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 91/402 (22%), Positives = 184/402 (45%)
Query: 382 QGYCIDILLEALKLV--PYDVPYKFE-LFGDGL--SNPS-------YDGLVKMVANDVFD 429
+GYCID+L+E K + YD+ + FG L +N + GL+ + N+ D
Sbjct: 478 RGYCIDLLIELSKRINFTYDLALSPDGQFGHYLLRNNTGAMTLRKEWTGLMGELVNERAD 537
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 538 MIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 597
Query: 490 MIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG-R 539
++A+V+++L+ R + D +++ F++ L + E T S R
Sbjct: 598 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 657
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSFAY 595
I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 658 VLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSVD 717
Query: 596 SYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII 654
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 718 MYFRRQVELSNMYRTMEANNYATAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELVTA 776
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE-- 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 777 GELFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFEKT 835
Query: 713 PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 836 PNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 877
Score = 111 (44.1 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 61/219 (27%), Positives = 91/219 (41%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 311 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 360
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI + + H VG FS N++ S+
Sbjct: 361 ETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGK------FSYDSMRAKMRMNINDSE-- 412
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPLRIGV-P----RRASFVGFVTEEH--------- 376
I WPG + P G +I + + L I P RR F E
Sbjct: 413 -----IIWPGKQNRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNA 467
Query: 377 -DS----HKVQGYCIDILLEALKLVPYDVPYKFELFGDG 410
DS + +GYCID+L+E K + + Y L DG
Sbjct: 468 TDSTANEYCCRGYCIDLLIELSKRINFT--YDLALSPDG 504
Score = 91 (37.1 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 132 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVIII 191
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 192 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 251
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 252 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 282
>FB|FBgn0010399 [details] [associations]
symbol:Nmdar1 "NMDA receptor 1" species:7227 "Drosophila
melanogaster" [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS;IDA;NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IGI;IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IPI] [GO:0007616
"long-term memory" evidence=IGI;IMP] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0072375 "medium-term memory"
evidence=IMP] [GO:0008306 "associative learning" evidence=IDA]
[GO:0042331 "phototaxis" evidence=IDA] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0050975 "sensory
perception of touch" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 EMBL:AE014297 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0042331 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
GO:GO:0007476 GO:GO:0072375 InterPro:IPR001828 GO:GO:0055074
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GeneTree:ENSGT00700000104113 GO:GO:0004972 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
EMBL:X71790 EMBL:AY070577 PIR:S33754 RefSeq:NP_730940.1
UniGene:Dm.3670 HSSP:Q05586 ProteinModelPortal:Q24418 SMR:Q24418
STRING:Q24418 PRIDE:Q24418 EnsemblMetazoa:FBtr0078763 GeneID:40665
KEGG:dme:Dmel_CG2902 UCSC:CG2902-RA CTD:40665 FlyBase:FBgn0010399
HOGENOM:HOG000184780 InParanoid:Q24418 PhylomeDB:Q24418
GenomeRNAi:40665 NextBio:819920 Bgee:Q24418 Uniprot:Q24418
Length = 997
Score = 244 (91.0 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 91/404 (22%), Positives = 183/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N + + GL+ + N+
Sbjct: 466 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYILRNNTGAMTLRKEWTGLIGELVNER 523
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 524 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 762
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 763 TAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 821
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 822 KTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 865
Score = 107 (42.7 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 60/219 (27%), Positives = 94/219 (42%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 299 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 348
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI ++ + H VG FS ++++ K ++
Sbjct: 349 ETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGK------FSY---DSMRAK----MRMR 395
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPLRIGV-P----RRASFVGFVTEE--------HD 377
I WPG + P G +I + R L I P RR F E ++
Sbjct: 396 INDSEIIWPGKQRRKPEGIMIPTHLRLLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNN 455
Query: 378 SHKV------QGYCIDILLEALKLVPYDVPYKFELFGDG 410
S +GYCID+L+E K + + Y L DG
Sbjct: 456 SDATANEFCCRGYCIDLLIELSKRINFT--YDLALSPDG 492
Score = 91 (37.1 bits), Expect = 3.0e-27, Sum P(3) = 3.0e-27
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 120 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVIII 179
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 180 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 239
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 240 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B3P2E5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7220 "Drosophila erecta" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH954181 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001978937.1
ProteinModelPortal:B3P2E5 EnsemblMetazoa:FBtr0131035 GeneID:6552207
KEGG:der:Dere_GG10981 FlyBase:FBgn0103284 Uniprot:B3P2E5
Length = 997
Score = 245 (91.3 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 91/404 (22%), Positives = 183/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N + + GL+ + N+
Sbjct: 466 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNER 523
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 524 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 762
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 763 TAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 821
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 822 KTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 865
Score = 104 (41.7 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 59/219 (26%), Positives = 94/219 (42%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 299 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 348
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI ++ + H VG FS ++++ K ++
Sbjct: 349 ETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGK------FSY---DSMRAK----MRMR 395
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPLRIGV-P----RRASFVGFVTEE--------HD 377
I WPG + P G +I + + L I P RR F E ++
Sbjct: 396 INDSEIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNN 455
Query: 378 SHKV------QGYCIDILLEALKLVPYDVPYKFELFGDG 410
S +GYCID+L+E K + + Y L DG
Sbjct: 456 SDATANEFCCRGYCIDLLIELSKRINFT--YDLALSPDG 492
Score = 91 (37.1 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 120 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVIII 179
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 180 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 239
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 240 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4I414 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7238 "Drosophila sechellia" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH480821 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002038420.1
ProteinModelPortal:B4I414 EnsemblMetazoa:FBtr0193612 GeneID:6613956
KEGG:dse:Dsec_GM10627 FlyBase:FBgn0165573 Uniprot:B4I414
Length = 997
Score = 245 (91.3 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 91/404 (22%), Positives = 183/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N + + GL+ + N+
Sbjct: 466 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNER 523
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 524 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 762
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 763 TAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 821
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 822 KTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 865
Score = 104 (41.7 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 59/219 (26%), Positives = 94/219 (42%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 299 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 348
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI ++ + H VG FS ++++ K ++
Sbjct: 349 ETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGK------FSY---DSMRAK----MRMR 395
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPLRIGV-P----RRASFVGFVTEE--------HD 377
I WPG + P G +I + + L I P RR F E ++
Sbjct: 396 INDSEIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNN 455
Query: 378 SHKV------QGYCIDILLEALKLVPYDVPYKFELFGDG 410
S +GYCID+L+E K + + Y L DG
Sbjct: 456 SDATANEFCCRGYCIDLLIELSKRINFT--YDLALSPDG 492
Score = 91 (37.1 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 120 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVIII 179
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 180 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 239
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 240 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4PVB0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7245 "Drosophila yakuba" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
EMBL:CM000160 InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002096067.1 ProteinModelPortal:B4PVB0 STRING:B4PVB0
EnsemblMetazoa:FBtr0271792 GeneID:6535418 KEGG:dya:Dyak_GE25274
FlyBase:FBgn0242356 Uniprot:B4PVB0
Length = 997
Score = 245 (91.3 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 91/404 (22%), Positives = 183/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N + + GL+ + N+
Sbjct: 466 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNER 523
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 524 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 762
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 763 TAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 821
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 822 KTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 865
Score = 104 (41.7 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 59/219 (26%), Positives = 94/219 (42%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 299 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 348
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI ++ + H VG FS ++++ K ++
Sbjct: 349 ETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGK------FSY---DSMRAK----MRMR 395
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPLRIGV-P----RRASFVGFVTEE--------HD 377
I WPG + P G +I + + L I P RR F E ++
Sbjct: 396 INDSEIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNN 455
Query: 378 SHKV------QGYCIDILLEALKLVPYDVPYKFELFGDG 410
S +GYCID+L+E K + + Y L DG
Sbjct: 456 SDATANEFCCRGYCIDLLIELSKRINFT--YDLALSPDG 492
Score = 91 (37.1 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 120 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVIII 179
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 180 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 239
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 240 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>UNIPROTKB|B4QWW7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7240 "Drosophila simulans" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CM000364 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002102226.1
ProteinModelPortal:B4QWW7 EnsemblMetazoa:FBtr0219522 GeneID:6726819
KEGG:dsi:Dsim_GD19612 FlyBase:FBgn0191104 Uniprot:B4QWW7
Length = 997
Score = 245 (91.3 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 91/404 (22%), Positives = 183/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N + + GL+ + N+
Sbjct: 466 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNER 523
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 524 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 583
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 584 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 643
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 644 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 703
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 704 VDMYFRRQVELSNMYRTMEANNYATAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 762
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 763 TAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 821
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 822 KTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 865
Score = 104 (41.7 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 59/219 (26%), Positives = 94/219 (42%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 299 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 348
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI ++ + H VG FS ++++ K ++
Sbjct: 349 ETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGK------FSY---DSMRAK----MRMR 395
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPLRIGV-P----RRASFVGFVTEE--------HD 377
I WPG + P G +I + + L I P RR F E ++
Sbjct: 396 INDSEIIWPGKQRRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNN 455
Query: 378 SHKV------QGYCIDILLEALKLVPYDVPYKFELFGDG 410
S +GYCID+L+E K + + Y L DG
Sbjct: 456 SDATANEFCCRGYCIDLLIELSKRINFT--YDLALSPDG 492
Score = 91 (37.1 bits), Expect = 4.6e-27, Sum P(3) = 4.6e-27
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 120 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFAYTKVIII 179
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 180 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 239
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 240 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
>ZFIN|ZDB-GENE-051202-1 [details] [associations]
symbol:grin1a "glutamate receptor, ionotropic,
N-methyl D-aspartate 1a" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:BX005379 IPI:IPI00920462
Ensembl:ENSDART00000129744 Uniprot:E7F101
Length = 966
Score = 238 (88.8 bits), Expect = 1.1e-26, Sum P(4) = 1.1e-26
Identities = 85/361 (23%), Positives = 162/361 (44%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 514 WNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 573
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 574 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 633
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 634 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 688
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 689 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 748
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S AIL ENG ++ L + W
Sbjct: 749 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMEDLDKTW 808
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 809 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIAAGIFLIFIEIAYKRHKDARRKQMQ 865
Query: 755 M 755
+
Sbjct: 866 L 866
Score = 119 (46.9 bits), Expect = 8.8e-14, Sum P(4) = 8.8e-14
Identities = 31/127 (24%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ L L + Y+ L DG ++N + ++G++ + + D V
Sbjct: 473 GFCIDLLIK-LALT-MNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIV 530
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 531 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 590
Query: 493 VVIWILE 499
V++++L+
Sbjct: 591 VMLYLLD 597
Score = 91 (37.1 bits), Expect = 1.1e-26, Sum P(4) = 1.1e-26
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 93 VQFNQH-DITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
+QFNQ ++T LL +K L RV ++ S + ++ TA+ L M + YVWL
Sbjct: 213 LQFNQETNLTALLLEAKELEARVIILSASEEDAAAVYKTARFLNMTGSGYVWL 265
Score = 83 (34.3 bits), Expect = 1.1e-26, Sum P(4) = 1.1e-26
Identities = 27/95 (28%), Positives = 45/95 (47%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+SI + + NIT E P R + ++ G R L+ + +
Sbjct: 300 DAVAVVAQSIQELFEKENIT-----EPP-----RGCVGNTNIWKTGPLFKRVLMSSKYPE 349
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
GL+G+V+FN D + Y ++N K + +VG +
Sbjct: 350 GLTGRVEFNDDGDRKYAHYSILNYQKSRLIQVGIY 384
Score = 67 (28.6 bits), Expect = 1.1e-26, Sum P(4) = 1.1e-26
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 332 KLQNITWPGGKTETPRGWVIADNARPLRI 360
K + I WPGG+TE PRG+ ++ + + I
Sbjct: 393 KQRKIIWPGGETERPRGFQMSTRLKIVTI 421
>UNIPROTKB|B3LZ39 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7217 "Drosophila ananassae" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH902617 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 RefSeq:XP_001953330.1
ProteinModelPortal:B3LZ39 STRING:B3LZ39 EnsemblMetazoa:FBtr0122404
GeneID:6500487 KEGG:dan:Dana_GF17704 FlyBase:FBgn0094722
InParanoid:B3LZ39 KO:K05208 OrthoDB:EOG4RXWF5 InterPro:IPR018882
Pfam:PF10562 Uniprot:B3LZ39
Length = 994
Score = 245 (91.3 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 91/404 (22%), Positives = 183/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N + + GL+ + N+
Sbjct: 463 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELVNER 520
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 521 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 580
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 581 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 640
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 641 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 700
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 701 VDMYFRRQVELSNMYRTMEANNYATAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 759
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 760 TAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 818
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 819 KTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 862
Score = 100 (40.3 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 59/219 (26%), Positives = 90/219 (41%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 296 DSVYVLASAIKEMISNETIG-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 345
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI ++ + H VG FS ++ S+
Sbjct: 346 ETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGK------FSYDNERAKMRMRINDSE-- 397
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPLRIGV-P----RRASFVGFVTEEHD-------- 377
I WPG + P G +I + + L I P RR F E +
Sbjct: 398 -----IIWPGKQRRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNA 452
Query: 378 SHKV------QGYCIDILLEALKLVPYDVPYKFELFGDG 410
S +GYCID+L+E K + + Y L DG
Sbjct: 453 SDATANEFCCRGYCIDLLIELSKRINFT--YDLALSPDG 489
Score = 91 (37.1 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 117 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFSYTKVIII 176
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 177 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 236
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 237 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 267
>UNIPROTKB|B4MU83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7260 "Drosophila willistoni" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH EMBL:CH963852
RefSeq:XP_002064686.1 ProteinModelPortal:B4MU83 STRING:B4MU83
EnsemblMetazoa:FBtr0254355 GeneID:6641663 KEGG:dwi:Dwil_GK23704
FlyBase:FBgn0225666 InParanoid:B4MU83 Uniprot:B4MU83
Length = 982
Score = 247 (92.0 bits), Expect = 2.9e-26, Sum P(3) = 2.9e-26
Identities = 91/402 (22%), Positives = 181/402 (45%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS-------YDGLVKMVANDVFD 429
GYCID+L+E K + + Y L DG L N + + GL+ + N+ D
Sbjct: 456 GYCIDLLIELAKRINFT--YDLALSPDGQFGHYILRNNTGATLRKEWTGLIGQLVNERAD 513
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 514 MIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 573
Query: 490 MIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG-R 539
++A+V+++L+ R + D +++ F++ L + E T S R
Sbjct: 574 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFSAR 633
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSFAY 595
I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 634 VLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSSVD 693
Query: 596 SYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII 654
Y + + R + + E A+ Q + G + A + + ++ S +
Sbjct: 694 MYFRRQVELSNMYRTMEANNYATAEHAI-QDVKKGKLMAFIWDSSRLEYEASKDCELVTA 752
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE-- 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 753 GELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFEKT 811
Query: 713 PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 812 PNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 853
Score = 101 (40.6 bits), Expect = 2.9e-26, Sum P(3) = 2.9e-26
Identities = 53/212 (25%), Positives = 87/212 (41%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 288 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKTRNITG 337
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI + + H VG FS ++ S++
Sbjct: 338 ETGQVAFDDNGDRIYAGYDVINIRENQKQHVVGK------FSYDNMRAKMRMKINDSEII 391
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPL----RIG------VPRRASFVGFVTEEHDSHK 380
W + P G ++ +P R+G P F T + +++
Sbjct: 392 WAGKQKRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFHCEPNERPCPLFNTTDATANE 451
Query: 381 V--QGYCIDILLEALKLVPYDVPYKFELFGDG 410
GYCID+L+E K + + Y L DG
Sbjct: 452 FCCSGYCIDLLIELAKRINFT--YDLALSPDG 481
Score = 84 (34.6 bits), Expect = 2.9e-26, Sum P(3) = 2.9e-26
Identities = 29/151 (19%), Positives = 60/151 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 109 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFSYTKVIII 168
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQH--DITVLLNNSKPLGPRVYV 116
+ D GR + + V + + + V+F + L K RVY+
Sbjct: 169 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVEMIVEFEPKLTSFSEHLTYMKTAQSRVYL 228
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A+ M +VW+ T+
Sbjct: 229 MYASTEDAQIIFRDARDHNMTQEGHVWIVTE 259
>UNIPROTKB|Q5VSF9 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOGENOM:HOG000231491 HOVERGEN:HBG052638 UniGene:Hs.558334
HGNC:HGNC:4584 ChiTaRS:GRIN1 IPI:IPI00647309 SMR:Q5VSF9
STRING:Q5VSF9 Ensembl:ENST00000371555 Uniprot:Q5VSF9
Length = 922
Score = 238 (88.8 bits), Expect = 4.2e-26, Sum P(4) = 4.2e-26
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 519 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 578
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 579 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 638
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 639 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 693
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 694 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 753
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 754 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 813
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 814 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 870
Query: 755 M 755
+
Sbjct: 871 L 871
Score = 119 (46.9 bits), Expect = 3.6e-13, Sum P(4) = 3.6e-13
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 478 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 535
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 536 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 595
Query: 493 VVIWILE 499
V++++L+
Sbjct: 596 VMLYLLD 602
Score = 87 (35.7 bits), Expect = 4.2e-26, Sum P(4) = 4.2e-26
Identities = 46/204 (22%), Positives = 89/204 (43%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLP 90
F+R+ S Q + +++ Y W +I + DD GR L +LE+ +K +
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKSKKR-- 194
Query: 91 LPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTA--QKLQMMTNNYVWLATDW 148
N ++ L ++K GP+ V + DPG + T + ++ + A++
Sbjct: 195 -----NYENLDQLSYDNKR-GPKAEKV-LQFDPGTKNVTALLMEAKELEARVIILSASED 247
Query: 149 LSATL-ESFSKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYG 207
+AT+ + + +N T + +VG R+ I A G+ L++ G N
Sbjct: 248 DAATVYRAAAMLNMTGSGYVW-LVGERE-----ISGNALRYAPDGILGLQLIN-GKNE-S 299
Query: 208 LYAYDTVWAVARSIDKFINEHNIT 231
+ D V VA+++ + + + NIT
Sbjct: 300 AHISDAVGVVAQAVHELLEKENIT 323
Score = 82 (33.9 bits), Expect = 4.2e-26, Sum P(4) = 4.2e-26
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 304 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 353
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 354 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 395
Score = 65 (27.9 bits), Expect = 4.2e-26, Sum P(4) = 4.2e-26
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTI 424
>UNIPROTKB|B4JHV0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7222 "Drosophila grimshawi" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH916369 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_001989796.1 ProteinModelPortal:B4JHV0 STRING:B4JHV0
EnsemblMetazoa:FBtr0154407 GeneID:6563892 KEGG:dgr:Dgri_GH18993
FlyBase:FBgn0126460 InParanoid:B4JHV0 OMA:WLEMLSH Uniprot:B4JHV0
Length = 982
Score = 245 (91.3 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 92/404 (22%), Positives = 183/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N S + GL+ + N+
Sbjct: 461 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYILRNNSGAMTLRKEWTGLIGELVNER 518
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 519 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 578
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 579 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 638
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 639 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 698
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 699 VDMYFRRQVELSNMYRTMESNNYVTAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 757
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ AIL+ E+G ++KL ++W G ++ + E
Sbjct: 758 TAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 816
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 817 KTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 860
Score = 98 (39.6 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 53/212 (25%), Positives = 87/212 (41%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 294 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 343
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD 330
+GQV F+ + + + GYDVINI + + H VG FS P ++ S++
Sbjct: 344 ETGQVAFDDNGDRIYAGYDVINIREHQKQHVVGK------FSYDSPRGKMRMRINDSEII 397
Query: 331 WKLQNITWPGGKTETPRGWVIADNARPL----RIG------VPRRASFVGFVTEEHDSHK 380
W + P G ++ +P R+G P F +++
Sbjct: 398 WGGKQKRKPEGIMIPTHLKLLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNASGATANE 457
Query: 381 V--QGYCIDILLEALKLVPYDVPYKFELFGDG 410
+GYCID+L+E K + + Y L DG
Sbjct: 458 FCCRGYCIDLLIELSKRINFT--YDLALSPDG 487
Score = 87 (35.7 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 31/151 (20%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +++ + + +VI I
Sbjct: 115 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLEMLSHFLYTKVIII 174
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 175 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 234
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 235 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 265
>UNIPROTKB|Q5R1P0 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 InterPro:IPR018882
Pfam:PF10562 EMBL:AB195993 EMBL:AB195994 EMBL:AB195995
RefSeq:NP_001008717.1 UniGene:Cfa.16224 ProteinModelPortal:Q5R1P0
SMR:Q5R1P0 STRING:Q5R1P0 PRIDE:Q5R1P0 GeneID:494007 KEGG:cfa:494007
CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638 OrthoDB:EOG4CG07J
NextBio:20865536 Uniprot:Q5R1P0
Length = 943
Score = 238 (88.8 bits), Expect = 9.8e-26, Sum P(4) = 9.8e-26
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 519 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 578
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 579 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 638
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 639 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 693
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 694 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 753
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 754 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 813
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 814 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 870
Query: 755 M 755
+
Sbjct: 871 L 871
Score = 119 (46.9 bits), Expect = 7.9e-13, Sum P(4) = 7.9e-13
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 478 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 535
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 536 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 595
Query: 493 VVIWILE 499
V++++L+
Sbjct: 596 VMLYLLD 602
Score = 84 (34.6 bits), Expect = 9.8e-26, Sum P(4) = 9.8e-26
Identities = 45/204 (22%), Positives = 92/204 (45%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLP 90
F+R+ S Q + +++ Y W +I + DD GR L +LE+ +K +
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKSKKR-- 194
Query: 91 LPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTA--QKLQMMTNNYVWLATDW 148
N ++ L + K GP+ V + DPG + T + ++ + A++
Sbjct: 195 -----NYENLDQLSYDHKR-GPKAEKV-LQFDPGTKNVTALLMEARELEARVIILSASED 247
Query: 149 LSATL-ESFSKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYG 207
+AT+ + + +N T + +VG R+ + +++ + G+Q L++ G N
Sbjct: 248 DAATVYRAAAMLNMTGSGYVW-LVGEREISGNAL--RYAPDGIIGLQ---LIN-GKNE-S 299
Query: 208 LYAYDTVWAVARSIDKFINEHNIT 231
+ D V VA+++ + + + NIT
Sbjct: 300 AHISDAVGVVAQAVHELLEKENIT 323
Score = 82 (33.9 bits), Expect = 9.8e-26, Sum P(4) = 9.8e-26
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 304 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 353
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 354 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 395
Score = 65 (27.9 bits), Expect = 9.8e-26, Sum P(4) = 9.8e-26
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTI 424
>UNIPROTKB|E2R3A6 [details] [associations]
symbol:E2R3A6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882
Pfam:PF10562 ProteinModelPortal:E2R3A6 Ensembl:ENSCAFT00000035191
Uniprot:E2R3A6
Length = 957
Score = 238 (88.8 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 517 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 576
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 577 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 636
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 637 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 691
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 692 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 751
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 752 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 811
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 812 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 868
Query: 755 M 755
+
Sbjct: 869 L 869
Score = 119 (46.9 bits), Expect = 8.4e-13, Sum P(4) = 8.4e-13
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 476 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 533
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 534 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 593
Query: 493 VVIWILE 499
V++++L+
Sbjct: 594 VMLYLLD 600
Score = 84 (34.6 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 45/204 (22%), Positives = 92/204 (45%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLP 90
F+R+ S Q + +++ Y W +I + DD GR L +LE+ +K +
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKSKKR-- 194
Query: 91 LPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTA--QKLQMMTNNYVWLATDW 148
N ++ L + K GP+ V + DPG + T + ++ + A++
Sbjct: 195 -----NYENLDQLSYDHKR-GPKAEKV-LQFDPGTKNVTALLMEARELEARVIILSASED 247
Query: 149 LSATL-ESFSKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYG 207
+AT+ + + +N T + +VG R+ + +++ + G+Q L++ G N
Sbjct: 248 DAATVYRAAAMLNMTGSGYVW-LVGEREISGNAL--RYAPDGIIGLQ---LIN-GKNE-S 299
Query: 208 LYAYDTVWAVARSIDKFINEHNIT 231
+ D V VA+++ + + + NIT
Sbjct: 300 AHISDAVGVVAQAVHELLEKENIT 323
Score = 82 (33.9 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 304 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 353
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 354 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 395
Score = 65 (27.9 bits), Expect = 1.1e-25, Sum P(4) = 1.1e-25
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTI 424
>UNIPROTKB|B4LZB5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7244 "Drosophila virilis" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH940650 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002054630.1 ProteinModelPortal:B4LZB5 STRING:B4LZB5
EnsemblMetazoa:FBtr0240485 GeneID:6630672 KEGG:dvi:Dvir_GJ24560
FlyBase:FBgn0211640 InParanoid:B4LZB5 OMA:HVANELH Uniprot:B4LZB5
Length = 984
Score = 237 (88.5 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 90/404 (22%), Positives = 182/404 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPS--------YDGLVKMVANDV 427
+GYCID+L+E K + + Y L DG L N + + GL+ + N+
Sbjct: 463 RGYCIDLLIELSKRINFT--YDLALSPDGQFGHYILRNNTGAMTLRKEWTGLIGELVNER 520
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAAS 487
D V + I R + ++FS+P+ G+ I+ + ++ FL+PF+ +W + S
Sbjct: 521 ADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVS 580
Query: 488 FVMIAVVIWILEH-----RV---NDDFRGPPRRQIATMFLFSFSTLFKTN-QEATVSSLG 538
++A+V+++L+ R + D +++ F++ L + E T S
Sbjct: 581 VHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGIGEGTPRSFS 640
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSF 593
R I +SYTA+L++ L +++ T + GI ++ + N + GS
Sbjct: 641 ARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTMENLTCATVKGSS 700
Query: 594 AYSYLSDSLRIQKS-RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG 652
Y + + R + + E+A+ Q + G + A + + ++ S +
Sbjct: 701 VDMYFRRQVELSNMYRTMESNNYVTAEQAI-QDVKKGKLMAFIWDSSRLEYEASKDCELV 759
Query: 653 IIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G+ F RSG+G Q+ SP ++ IL+ E+G ++KL ++W G ++ + E
Sbjct: 760 TAGELFGRSGYGVGLQKGSPWTDAVTLTILEFHESGFMEKLDKQWIF-HGHVQQNCELFE 818
Query: 713 --PHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQQQ 754
P+ L L + G+++L G + ++ ++ + + K+Q+
Sbjct: 819 KTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIYKKHQVKKQK 862
Score = 100 (40.3 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 55/215 (25%), Positives = 92/215 (42%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D+V+ +A +I + I+ I A + DS ++ G L + L N TG
Sbjct: 296 DSVYVLASAIKEMISNETIA-EAPKDCGDSAVN---------WESGKRLFQYLKSRNITG 345
Query: 272 LSGQVQFNQDRNIVSRGYDVINI-DKMEIHRVGYWFDGSGFSVLPPETLKGK---NVSHS 327
+GQV F+ + + + GYDVINI + + H VG FS ++L+ K ++ S
Sbjct: 346 ETGQVAFDDNGDRIYAGYDVINIREHQKQHLVGK------FSY---DSLRAKMRMRINDS 396
Query: 328 QLDWKLQNITWPGGKTETPRGWVIADNARPL----RIG------VPRRASFVGFVTEEHD 377
++ W + P G V+ +P R+G P F +
Sbjct: 397 EIIWGGKQKRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNASDAT 456
Query: 378 SHKV--QGYCIDILLEALKLVPYDVPYKFELFGDG 410
+++ +GYCID+L+E K + + Y L DG
Sbjct: 457 TNEFCCRGYCIDLLIELSKRINFT--YDLALSPDG 489
Score = 89 (36.4 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 32/151 (21%), Positives = 61/151 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P++ ++ D S F+R+ Q +L+ + + +VI I
Sbjct: 117 VSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLELLSHFLYTKVIII 176
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYK--LPLPVQFNQ--HDITVLLNNSKPLGPRVYV 116
+ D GR + + V + + L V+F T L + K RVY+
Sbjct: 177 HSSDTDGRAILGRFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHLIDMKTAQSRVYL 236
Query: 117 VHVSPDPGLRIFTTAQKLQMMTNNYVWLATD 147
++ S + IF A + M +VW+ T+
Sbjct: 237 MYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 267
>UNIPROTKB|F1P2K1 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00819235
Ensembl:ENSGALT00000040367 Uniprot:F1P2K1
Length = 797
Score = 241 (89.9 bits), Expect = 1.7e-25, Sum P(4) = 1.7e-25
Identities = 86/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 432 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 491
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 492 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 551
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 552 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 606
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 607 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 666
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S AILK ENG ++ L + W
Sbjct: 667 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTW 726
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 727 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 783
Query: 755 M 755
+
Sbjct: 784 L 784
Score = 116 (45.9 bits), Expect = 7.4e-12, Sum P(4) = 7.4e-12
Identities = 29/127 (22%), Positives = 66/127 (51%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L+ ++ + Y+ L DG ++N + ++G++ + + D V
Sbjct: 391 GFCIDLLIRLAGVMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 448
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 449 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 508
Query: 493 VVIWILE 499
V++++L+
Sbjct: 509 VMLYLLD 515
Score = 83 (34.3 bits), Expect = 1.7e-25, Sum P(4) = 1.7e-25
Identities = 51/234 (21%), Positives = 100/234 (42%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S A ++P++ S F+R+ S Q +++ + W VI I
Sbjct: 22 VSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILI 81
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS 120
DD GR L +LE+ +K + N ++ L ++K GP+ V +
Sbjct: 82 VSDDHEGRAAQKKLETLLEERESKSKKR-------NYENLDQLSYDNKR-GPKAEKV-LQ 132
Query: 121 PDPGLRIFTTA--QKLQMMTNNYVWLATDWLSATL-ESFSKMNQTSLRILQGVVGLRQHT 177
DPG + T+ + ++ + A++ +AT+ S + +N T + +VG R+ +
Sbjct: 133 FDPGTKNVTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVW-LVGEREIS 191
Query: 178 PDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNIT 231
+++ + G+Q L++ G N + D V VA+++ + NIT
Sbjct: 192 GNAL--RYAPDGVIGLQ---LIN-GKNE-SAHISDAVAVVAQAVHDLFEKENIT 238
Score = 77 (32.2 bits), Expect = 1.7e-25, Sum P(4) = 1.7e-25
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + NIT + P R + ++ G R L+ + ++
Sbjct: 219 DAVAVVAQAVHDLFEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYSE 268
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGS 309
G++G+V+FN+D + Y ++N+ ++ +VG ++GS
Sbjct: 269 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI-YNGS 306
Score = 61 (26.5 bits), Expect = 1.7e-25, Sum P(4) = 1.7e-25
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE P+G+ ++ + + I
Sbjct: 313 RKIIWPGGETEKPQGYQMSTKLKIVTI 339
>UNIPROTKB|F1NKY9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00821429
Ensembl:ENSGALT00000014471 Uniprot:F1NKY9
Length = 856
Score = 241 (89.9 bits), Expect = 2.7e-25, Sum P(4) = 2.7e-25
Identities = 86/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 432 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 491
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 492 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 551
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 552 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 606
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 607 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 666
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S AILK ENG ++ L + W
Sbjct: 667 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTW 726
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 727 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 783
Query: 755 M 755
+
Sbjct: 784 L 784
Score = 116 (45.9 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 29/127 (22%), Positives = 66/127 (51%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L+ ++ + Y+ L DG ++N + ++G++ + + D V
Sbjct: 391 GFCIDLLIRLAGVMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 448
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 449 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 508
Query: 493 VVIWILE 499
V++++L+
Sbjct: 509 VMLYLLD 515
Score = 83 (34.3 bits), Expect = 2.7e-25, Sum P(4) = 2.7e-25
Identities = 51/234 (21%), Positives = 100/234 (42%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S A ++P++ S F+R+ S Q +++ + W VI I
Sbjct: 22 VSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILI 81
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS 120
DD GR L +LE+ +K + N ++ L ++K GP+ V +
Sbjct: 82 VSDDHEGRAAQKKLETLLEERESKSKKR-------NYENLDQLSYDNKR-GPKAEKV-LQ 132
Query: 121 PDPGLRIFTTA--QKLQMMTNNYVWLATDWLSATL-ESFSKMNQTSLRILQGVVGLRQHT 177
DPG + T+ + ++ + A++ +AT+ S + +N T + +VG R+ +
Sbjct: 133 FDPGTKNVTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVW-LVGEREIS 191
Query: 178 PDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNIT 231
+++ + G+Q L++ G N + D V VA+++ + NIT
Sbjct: 192 GNAL--RYAPDGVIGLQ---LIN-GKNE-SAHISDAVAVVAQAVHDLFEKENIT 238
Score = 77 (32.2 bits), Expect = 2.7e-25, Sum P(4) = 2.7e-25
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + NIT + P R + ++ G R L+ + ++
Sbjct: 219 DAVAVVAQAVHDLFEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYSE 268
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGS 309
G++G+V+FN+D + Y ++N+ ++ +VG ++GS
Sbjct: 269 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI-YNGS 306
Score = 61 (26.5 bits), Expect = 2.7e-25, Sum P(4) = 2.7e-25
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE P+G+ ++ + + I
Sbjct: 313 RKIIWPGGETEKPQGYQMSTKLKIVTI 339
>UNIPROTKB|F1P2J8 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 OMA:VYRSAAM EMBL:AADN02026958 IPI:IPI00639787
ProteinModelPortal:F1P2J8 Ensembl:ENSGALT00000040370 Uniprot:F1P2J8
Length = 901
Score = 241 (89.9 bits), Expect = 3.6e-25, Sum P(4) = 3.6e-25
Identities = 86/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 432 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 491
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 492 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 551
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 552 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 606
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 607 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 666
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S AILK ENG ++ L + W
Sbjct: 667 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDLDKTW 726
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 727 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 783
Query: 755 M 755
+
Sbjct: 784 L 784
Score = 116 (45.9 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 29/127 (22%), Positives = 66/127 (51%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L+ ++ + Y+ L DG ++N + ++G++ + + D V
Sbjct: 391 GFCIDLLIRLAGVMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 448
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 449 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 508
Query: 493 VVIWILE 499
V++++L+
Sbjct: 509 VMLYLLD 515
Score = 83 (34.3 bits), Expect = 3.6e-25, Sum P(4) = 3.6e-25
Identities = 51/234 (21%), Positives = 100/234 (42%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S A ++P++ S F+R+ S Q +++ + W VI I
Sbjct: 22 VSYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILI 81
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS 120
DD GR L +LE+ +K + N ++ L ++K GP+ V +
Sbjct: 82 VSDDHEGRAAQKKLETLLEERESKSKKR-------NYENLDQLSYDNKR-GPKAEKV-LQ 132
Query: 121 PDPGLRIFTTA--QKLQMMTNNYVWLATDWLSATL-ESFSKMNQTSLRILQGVVGLRQHT 177
DPG + T+ + ++ + A++ +AT+ S + +N T + +VG R+ +
Sbjct: 133 FDPGTKNVTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVW-LVGEREIS 191
Query: 178 PDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNIT 231
+++ + G+Q L++ G N + D V VA+++ + NIT
Sbjct: 192 GNAL--RYAPDGVIGLQ---LIN-GKNE-SAHISDAVAVVAQAVHDLFEKENIT 238
Score = 77 (32.2 bits), Expect = 3.6e-25, Sum P(4) = 3.6e-25
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + NIT + P R + ++ G R L+ + ++
Sbjct: 219 DAVAVVAQAVHDLFEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYSE 268
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGS 309
G++G+V+FN+D + Y ++N+ ++ +VG ++GS
Sbjct: 269 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI-YNGS 306
Score = 61 (26.5 bits), Expect = 3.6e-25, Sum P(4) = 3.6e-25
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE P+G+ ++ + + I
Sbjct: 313 RKIIWPGGETEKPQGYQMSTKLKIVTI 339
>UNIPROTKB|F1PY46 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000031011 Uniprot:F1PY46
Length = 921
Score = 238 (88.8 bits), Expect = 7.1e-25, Sum P(4) = 7.1e-25
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 497 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 556
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 557 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 616
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 617 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 671
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 672 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 731
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 732 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 791
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 792 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 848
Query: 755 M 755
+
Sbjct: 849 L 849
Score = 119 (46.9 bits), Expect = 5.6e-12, Sum P(4) = 5.6e-12
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 456 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 513
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 514 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 573
Query: 493 VVIWILE 499
V++++L+
Sbjct: 574 VMLYLLD 580
Score = 82 (33.9 bits), Expect = 7.1e-25, Sum P(4) = 7.1e-25
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 282 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 331
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 332 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 373
Score = 75 (31.5 bits), Expect = 7.1e-25, Sum P(4) = 7.1e-25
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 99 DITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
++T LL ++ L RV ++ S D ++ A L M + YVWL
Sbjct: 202 NVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 247
Score = 65 (27.9 bits), Expect = 7.1e-25, Sum P(4) = 7.1e-25
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 376 RKIIWPGGETEKPRGYQMSTRLKIVTI 402
>ZFIN|ZDB-GENE-030131-6502 [details] [associations]
symbol:grik1a "glutamate receptor, ionotropic,
kainate 1a" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-6502 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 KO:K05201
GeneTree:ENSGT00590000083056 EMBL:AL837524 EMBL:CT573197
EMBL:AL954816 IPI:IPI00611951 RefSeq:XP_001924038.3
UniGene:Dr.14817 UniGene:Dr.155893 ProteinModelPortal:E9QGN5
Ensembl:ENSDART00000147089 GeneID:798001 KEGG:dre:798001 CTD:798001
NextBio:20933239 ArrayExpress:E9QGN5 Bgee:E9QGN5 Uniprot:E9QGN5
Length = 904
Score = 178 (67.7 bits), Expect = 7.3e-25, Sum P(3) = 7.3e-25
Identities = 49/220 (22%), Positives = 103/220 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSNPS--YDGLVKMVANDVFDAAV 432
+ + + +GYC+D+L E ++ + K G G N ++G+V+ + + + D AV
Sbjct: 455 YGNDRFEGYCLDLLKELSNILGFTYEVKLVTDGKYGAQNDKGEWNGMVRELIDHIADLAV 514
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P T ++W + + +
Sbjct: 515 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLTPDIWMYVLLACLGV 574
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TMF---LFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P ++ T+ F + L + E +L R
Sbjct: 575 SCVLFVIARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTR 634
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 ILGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDL 674
Score = 122 (48.0 bits), Expect = 7.3e-25, Sum P(3) = 7.3e-25
Identities = 46/196 (23%), Positives = 84/196 (42%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 647 IISSYTANLAAFLTVERMDSPIDSADDL-AKQTRIEYGAVRDGSTMTFFKKSKISTYEKM 705
Query: 609 LISLGSPEDYERALRQGPRNGGVA------AIVDELPYVQLFLSNQTDFGIIGQPFTRSG 662
+ S ++ AL + ++G A++ E ++ + +G G
Sbjct: 706 WAFMSSRKN--TALVKNSKDGITRVLTTDYALLMESTSIEYITQRNCNLTQVGGLIDSKG 763
Query: 663 WGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFW 722
+G SP ++ AIL+L E G L + EKW+ GCPEE E L + +
Sbjct: 764 YGVGTPIGSPYRDKVTIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVENIG 821
Query: 723 GLYL-LCGTITFTAFL 737
G+++ L + + F+
Sbjct: 822 GIFIVLAAGLVLSVFV 837
Score = 121 (47.7 bits), Expect = 7.3e-25, Sum P(3) = 7.3e-25
Identities = 69/320 (21%), Positives = 123/320 (38%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ D++ FY WK V +Y
Sbjct: 121 VQSICNALEVPHIQTRWKHPSVDNKD-NFYINLYPEYTSISRAILDIVIFYKWKCVTVVY 179
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L KN K+ + LP D LL K YV+ S
Sbjct: 180 -EDSTGLMRMQELIKAPSKNNLKIRIR-QLPS--GGGDSRPLLKEMKK-EKEFYVIFDCS 234
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGLRQH 176
+ + MMT Y + T D + LE + S +N T+ R+L L
Sbjct: 235 YQVAAELLKQLMSMGMMTEYYHFFFTTLDLFALDLEPYRYSGVNMTAFRLLN----LDDS 290
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
S+ +K + R + GL+S + T YD V+ VA A
Sbjct: 291 YVASVIQKWSMERQLAPPKPESGLMSGIMTTAAALMYDAVFMVA--------------VA 336
Query: 235 SHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVIN 293
S + +Q + K + G + + + GL+G++ N+ + D+I+
Sbjct: 337 SQRATQMTVSSLQCHRHKPWRYGPRFMNLFKEAQWDGLTGRIVLNKTDGLRKEFNLDLIS 396
Query: 294 IDKMEIHRVGYWFDGSGFSV 313
+ + ++G W +G ++
Sbjct: 397 LKEDGTAKIGVWNSYTGLNL 416
>UNIPROTKB|L7MTP7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA]
GeneTree:ENSGT00700000104113 EMBL:AAEX03006734
Ensembl:ENSCAFT00000031003 Uniprot:L7MTP7
Length = 942
Score = 238 (88.8 bits), Expect = 8.1e-25, Sum P(4) = 8.1e-25
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 518 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 577
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 578 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 637
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 638 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 692
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 693 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 752
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 753 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 812
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 813 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 869
Query: 755 M 755
+
Sbjct: 870 L 870
Score = 119 (46.9 bits), Expect = 6.1e-12, Sum P(4) = 6.1e-12
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 477 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 534
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 535 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 594
Query: 493 VVIWILE 499
V++++L+
Sbjct: 595 VMLYLLD 601
Score = 82 (33.9 bits), Expect = 8.1e-25, Sum P(4) = 8.1e-25
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 303 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 352
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 353 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 394
Score = 75 (31.5 bits), Expect = 8.1e-25, Sum P(4) = 8.1e-25
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 99 DITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
++T LL ++ L RV ++ S D ++ A L M + YVWL
Sbjct: 223 NVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 268
Score = 65 (27.9 bits), Expect = 8.1e-25, Sum P(4) = 8.1e-25
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 397 RKIIWPGGETEKPRGYQMSTRLKIVTI 423
>UNIPROTKB|F6Y5R7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
OMA:VYRSAAM Ensembl:ENSCAFT00000035191 EMBL:AAEX03006734
Uniprot:F6Y5R7
Length = 949
Score = 238 (88.8 bits), Expect = 8.4e-25, Sum P(4) = 8.4e-25
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 525 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 584
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 585 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 644
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 645 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 699
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 700 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 759
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 760 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 819
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 820 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 876
Query: 755 M 755
+
Sbjct: 877 L 877
Score = 119 (46.9 bits), Expect = 6.4e-12, Sum P(4) = 6.4e-12
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 484 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 541
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 542 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 601
Query: 493 VVIWILE 499
V++++L+
Sbjct: 602 VMLYLLD 608
Score = 82 (33.9 bits), Expect = 8.4e-25, Sum P(4) = 8.4e-25
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 310 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 359
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 360 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 401
Score = 75 (31.5 bits), Expect = 8.4e-25, Sum P(4) = 8.4e-25
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 99 DITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
++T LL ++ L RV ++ S D ++ A L M + YVWL
Sbjct: 230 NVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 275
Score = 65 (27.9 bits), Expect = 8.4e-25, Sum P(4) = 8.4e-25
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 404 RKIIWPGGETEKPRGYQMSTRLKIVTI 430
>UNIPROTKB|G3N3K3 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060179 "male mating behavior" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043278 "response to morphine" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021586
"pons maturation" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0018964 "propylene metabolic process"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0008542 "visual
learning" evidence=IEA] [GO:0008355 "olfactory learning"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0007616 "long-term
memory" evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0021987 GO:GO:0008355 GO:GO:0014069 GO:GO:0009986
GO:GO:0043278 GO:GO:0019233 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0008344
GO:GO:0001967 GO:GO:0008542 GO:GO:0007616 GO:GO:0005509
GO:GO:0060079 GO:GO:0001975 GO:GO:0043524 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043065 GO:GO:0050770
GO:GO:0048814 GO:GO:0007585 GO:GO:0006874 GO:GO:0001661
GO:GO:0051963 GO:GO:0035176 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0060179 GO:GO:0004972
InterPro:IPR018882 Pfam:PF10562 OMA:VYRSAAM GO:GO:0021586
EMBL:DAAA02032413 EMBL:DAAA02032414 EMBL:DAAA02032415
Ensembl:ENSBTAT00000065439 Uniprot:G3N3K3
Length = 931
Score = 222 (83.2 bits), Expect = 5.3e-24, Sum P(4) = 5.3e-24
Identities = 90/397 (22%), Positives = 174/397 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+C+D+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 478 GFCVDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 535
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + +
Sbjct: 536 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLRP-----LR 590
Query: 493 VVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTN--QEATVSSLGRXXXXXXXXXXX 550
+VN + +++ FS+ L + + A S R
Sbjct: 591 PRSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM 650
Query: 551 XITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDS-LRIQKSRL 609
I +SYTA+L++ L + + + GI ND + F Y+ + S + I R
Sbjct: 651 IIVASYTANLAAFLVLDRPEERITGI-----NDPRLRNPSDKFIYATVKQSSVDIYFRRQ 705
Query: 610 ISLGS------PEDYERALR--QGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRS 661
+ L + +YE A Q R+ + A + + ++ S + D G+ F RS
Sbjct: 706 VELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRS 765
Query: 662 GWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISF 721
G+G ++DSP +S +ILK ENG ++ L + W + C + R ++ P L +
Sbjct: 766 GFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQEC--DSRSNA-PATLTFENM 822
Query: 722 WGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQM 755
G+++L G I FL+F+ ++ R KQ Q+
Sbjct: 823 AGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQL 859
Score = 84 (34.6 bits), Expect = 5.3e-24, Sum P(4) = 5.3e-24
Identities = 46/204 (22%), Positives = 91/204 (44%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLP 90
F+R+ S Q + +++ Y W VI + DD GR L +LE+ +K +
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRLETLLEERESKSKKR-- 194
Query: 91 LPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTA--QKLQMMTNNYVWLATDW 148
N + L + K GP+ V + DPG + T + ++ + A++
Sbjct: 195 -----NYESLDQLSYDHKR-GPKAEKV-LQFDPGTKNVTALLLEARELEARVIILSASED 247
Query: 149 LSATL-ESFSKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYG 207
+AT+ + + +N T + +VG R+ + +++ + G+Q L++ G N
Sbjct: 248 DAATVYRAAAMLNMTGSGYVW-LVGEREISGNAL--RYAPDGIIGLQ---LIN-GKNE-S 299
Query: 208 LYAYDTVWAVARSIDKFINEHNIT 231
+ D V VA+++ + + + NIT
Sbjct: 300 AHISDAVGVVAQAVHELLEKENIT 323
Score = 82 (33.9 bits), Expect = 5.3e-24, Sum P(4) = 5.3e-24
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 304 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 353
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 354 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 395
Score = 65 (27.9 bits), Expect = 5.3e-24, Sum P(4) = 5.3e-24
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 398 RKIIWPGGETEKPRGYQMSTRLKIVTI 424
>UNIPROTKB|J9NWC8 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000044506 Uniprot:J9NWC8
Length = 730
Score = 238 (88.8 bits), Expect = 5.4e-24, Sum P(4) = 5.4e-24
Identities = 85/361 (23%), Positives = 163/361 (45%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ + + D V + I R + ++FS+P+ GL I+ +++ F++P
Sbjct: 290 WNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQP 349
Query: 476 FTVEMWCVTAASFVMIAVVIWILEH-------RVNDDFRGPPRRQIATMFLFSFSTLFKT 528
F +W + S ++AV++++L+ +VN + +++ FS+ L +
Sbjct: 350 FQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNS 409
Query: 529 N--QEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPI 586
+ A S R I +SYTA+L++ L + + + GI ND +
Sbjct: 410 GIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI-----NDPRL 464
Query: 587 GYQVGSFAYSYLSDS-LRIQKSRLISLGS------PEDYERALR--QGPRNGGVAAIVDE 637
F Y+ + S + I R + L + +YE A Q R+ + A + +
Sbjct: 465 RNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWD 524
Query: 638 LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKW 697
++ S + D G+ F RSG+G ++DSP +S +ILK ENG ++ L + W
Sbjct: 525 SAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTW 584
Query: 698 FCKEGCPEERRQHSEPHQLRLISFWGLYLL-CGTITFTAFLVFLLRMVCQY--VRYKQQQ 754
+ C + R ++ P L + G+++L G I FL+F+ ++ R KQ Q
Sbjct: 585 VRYQEC--DSRSNA-PATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQ 641
Query: 755 M 755
+
Sbjct: 642 L 642
Score = 119 (46.9 bits), Expect = 5.8e-11, Sum P(4) = 5.8e-11
Identities = 29/127 (22%), Positives = 67/127 (52%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDG-------LSNPS---YDGLVKMVANDVFDAAV 432
G+CID+L++ + + + Y+ L DG ++N + ++G++ + + D V
Sbjct: 249 GFCIDLLIKLARTMNFT--YEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIV 306
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R + ++FS+P+ GL I+ +++ F++PF +W + S ++A
Sbjct: 307 APLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVA 366
Query: 493 VVIWILE 499
V++++L+
Sbjct: 367 VMLYLLD 373
Score = 82 (33.9 bits), Expect = 5.4e-24, Sum P(4) = 5.4e-24
Identities = 25/105 (23%), Positives = 53/105 (50%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFT- 270
D V VA+++ + + + NIT + P R + ++ G R L+ + +
Sbjct: 75 DAVGVVAQAVHELLEKENIT-----DPP-----RGCVGNTNIWKTGPLFKRVLMSSKYAD 124
Query: 271 GLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLP 315
G++G+V+FN+D + Y ++N+ ++ +VG + +G V+P
Sbjct: 125 GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY---NGTHVIP 166
Score = 65 (27.9 bits), Expect = 5.4e-24, Sum P(4) = 5.4e-24
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 334 QNITWPGGKTETPRGWVIADNARPLRI 360
+ I WPGG+TE PRG+ ++ + + I
Sbjct: 169 RKIIWPGGETEKPRGYQMSTRLKIVTI 195
Score = 60 (26.2 bits), Expect = 5.4e-24, Sum P(4) = 5.4e-24
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 107 SKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
++ L RV ++ S D ++ A L M + YVWL
Sbjct: 3 ARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 40
>UNIPROTKB|F1PHA8 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2900 KO:K05204 OMA:NRAPERL EMBL:AAEX03003415
EMBL:AAEX03003416 EMBL:AAEX03003417 EMBL:AAEX03003418
EMBL:AAEX03003419 RefSeq:XP_853030.3 Ensembl:ENSCAFT00000018877
GeneID:610429 KEGG:cfa:610429 Uniprot:F1PHA8
Length = 956
Score = 198 (74.8 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 56/226 (24%), Positives = 115/226 (50%)
Query: 374 EEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLV-KMVANDV 427
E + + +G+C+D+L E +++ ++ YK L GDG+ +N ++ G+V +++A
Sbjct: 437 EMEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKA 494
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAA 486
D AV + I R K++DFS+P+++ G+ I+ ++ K + FL PF+ +W
Sbjct: 495 -DLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLL 553
Query: 487 SFVMIAVVIWILEHRVNDDFRGP-PRRQ-----IATMFLFSFSTLFKTN----QEATVS- 535
+++ ++ V++++ ++ P P Q + + S F Q +T++
Sbjct: 554 AYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAP 613
Query: 536 -SLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+L R I SSYTA+L++ LTVQ++ ++ ++ L
Sbjct: 614 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDL 659
Score = 129 (50.5 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ ++ L + I Y G + ++ +S R+
Sbjct: 632 IISSYTANLAAFLTVQRMDVPIESVDDL-ADQTAIEYGTIHGGSSMTFFQNSRYQTYQRM 690
Query: 610 ISL---GSPEDYERALRQG-PR--NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+ P + ++ +G R N A ++ E + + + IG G+
Sbjct: 691 WNYMYSKQPSVFVKSTEEGIARVLNSNYAFLL-ESTMNEYYRQRNCNLTQIGGLLDTKGY 749
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G S AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 750 GIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIF 809
Query: 724 LYLLCGTIT--FTAFLVFL 740
+ L+CG I F A L FL
Sbjct: 810 VVLICGLIVAIFMAMLEFL 828
Score = 83 (34.3 bits), Expect = 9.5e-24, Sum P(3) = 9.5e-24
Identities = 43/230 (18%), Positives = 86/230 (37%)
Query: 99 DITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSK 158
D T LL + ++H + I A +L M++ Y ++ T+ L +L+
Sbjct: 199 DPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN-LEFSLQRMDS 257
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWS-GMQQKGLVSAGLNTYGLYAYDTVWAV 217
+ + IL + + H ++ W L++ L+ D V+AV
Sbjct: 258 LVDDRVNILGFSIFNQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAV 315
Query: 218 ARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQ 277
++ + +N S E+ + +++ GT L+ L GL+G ++
Sbjct: 316 VTAVQE-LNR-------SQEIG---VKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIE 364
Query: 278 FNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
FN + ++ + ++G W G S+ L N+S S
Sbjct: 365 FNSKGQRSNYALKILQFTRNGFRQIGQWHVADGLSM--DSRLYASNISDS 412
>MGI|MGI:95817 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95817
GO:GO:0005634 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0043204 GO:GO:0035235 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 EMBL:AC160123 GO:GO:0031960 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0032983 CTD:2900
KO:K05204 OMA:NRAPERL EMBL:AK032029 EMBL:AC122449 EMBL:AC136903
EMBL:AC140387 IPI:IPI00273856 RefSeq:NP_780690.2 UniGene:Mm.370291
ProteinModelPortal:Q8BMF5 SMR:Q8BMF5 STRING:Q8BMF5
PhosphoSite:Q8BMF5 PRIDE:Q8BMF5 Ensembl:ENSMUST00000034515
Ensembl:ENSMUST00000114865 GeneID:110637 KEGG:mmu:110637
InParanoid:Q8BMF5 OrthoDB:EOG402WRF NextBio:364375 Bgee:Q8BMF5
CleanEx:MM_GRIK4 Genevestigator:Q8BMF5
GermOnline:ENSMUSG00000032017 Uniprot:Q8BMF5
Length = 956
Score = 195 (73.7 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 55/226 (24%), Positives = 115/226 (50%)
Query: 374 EEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLV-KMVANDV 427
E + + +G+C+D+L E +++ ++ YK L GDG+ +N ++ G+V +++A
Sbjct: 437 EMEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKA 494
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAA 486
D AV + I R K++DFS+P+++ G+ I+ ++ + + FL PF+ +W
Sbjct: 495 -DLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLL 553
Query: 487 SFVMIAVVIWILEHRVNDDFRGP-PRRQ-----IATMFLFSFSTLFKTN----QEATVS- 535
+++ ++ V++++ ++ P P Q + + S F Q +T++
Sbjct: 554 AYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAP 613
Query: 536 -SLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+L R I SSYTA+L++ LTVQ++ ++ ++ L
Sbjct: 614 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDL 659
Score = 129 (50.5 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ ++ L + I Y G + ++ +S R+
Sbjct: 632 IISSYTANLAAFLTVQRMEVPIESVDDL-ADQTAIEYGTIHGGSSMTFFQNSRYQTYQRM 690
Query: 610 ISL---GSPEDYERALRQG-PR--NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+ P + ++ +G R N A ++ E + + + IG G+
Sbjct: 691 WNYMYSKQPSVFVKSTEEGIARVLNSNYAFLL-ESTMNEYYRQRNCNLTQIGGLLDTKGY 749
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G S AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 750 GIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIF 809
Query: 724 LYLLCGTIT--FTAFLVFL 740
+ L+CG I F A L FL
Sbjct: 810 VVLICGLIVAIFMAMLEFL 828
Score = 84 (34.6 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 43/230 (18%), Positives = 86/230 (37%)
Query: 99 DITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSK 158
D T LL + ++H + I A +L M++ Y ++ T+ L +L+
Sbjct: 199 DPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN-LEFSLQRMDS 257
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWS-GMQQKGLVSAGLNTYGLYAYDTVWAV 217
+ + IL + + H ++ W L++ L+ D V+AV
Sbjct: 258 LVDDRVNILGFSIFNQSHAFFQEFSQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAV 315
Query: 218 ARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQ 277
++ + +N S E+ + +++ GT L+ L GL+G ++
Sbjct: 316 VTAVQE-LNR-------SQEIG---VKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIE 364
Query: 278 FNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
FN + ++ + ++G W G S+ L N+S S
Sbjct: 365 FNSKGQRSNYALKILQFTRNGFQQIGQWHVAEGLSM--DSRLYASNISDS 412
>UNIPROTKB|Q16099 [details] [associations]
symbol:GRIK4 "Glutamate receptor ionotropic, kainate 4"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005634 GO:GO:0005887 EMBL:CH471065 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0043204
GO:GO:0042734 GO:GO:0043195 DrugBank:DB00142 InterPro:IPR001828
GO:GO:0031960 eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:S67803
EMBL:AK292726 IPI:IPI00292269 PIR:JH0826 RefSeq:NP_055434.2
UniGene:Hs.568901 ProteinModelPortal:Q16099 SMR:Q16099
STRING:Q16099 TCDB:1.A.10.1.9 PhosphoSite:Q16099 DMDM:209572625
PaxDb:Q16099 PRIDE:Q16099 Ensembl:ENST00000438375
Ensembl:ENST00000527524 GeneID:2900 KEGG:hsa:2900 UCSC:uc001pxn.2
CTD:2900 GeneCards:GC11P120480 H-InvDB:HIX0036043 HGNC:HGNC:4582
MIM:600282 neXtProt:NX_Q16099 PharmGKB:PA28976 InParanoid:Q16099
KO:K05204 OMA:NRAPERL PhylomeDB:Q16099 BindingDB:Q16099
ChEMBL:CHEMBL2829 GenomeRNAi:2900 NextBio:11479 Bgee:Q16099
CleanEx:HS_GRIK4 Genevestigator:Q16099 GermOnline:ENSG00000149403
Uniprot:Q16099
Length = 956
Score = 198 (74.8 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 56/226 (24%), Positives = 115/226 (50%)
Query: 374 EEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLV-KMVANDV 427
E + + +G+C+D+L E +++ ++ YK L GDG+ +N ++ G+V +++A
Sbjct: 437 EMEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKA 494
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAA 486
D AV + I R K++DFS+P+++ G+ I+ ++ K + FL PF+ +W
Sbjct: 495 -DLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLL 553
Query: 487 SFVMIAVVIWILEHRVNDDFRGP-PRRQ-----IATMFLFSFSTLFKTN----QEATVS- 535
+++ ++ V++++ ++ P P Q + + S F Q +T++
Sbjct: 554 AYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAP 613
Query: 536 -SLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+L R I SSYTA+L++ LTVQ++ ++ ++ L
Sbjct: 614 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDL 659
Score = 129 (50.5 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ ++ L + I Y G + ++ +S R+
Sbjct: 632 IISSYTANLAAFLTVQRMDVPIESVDDL-ADQTAIEYGTIHGGSSMTFFQNSRYQTYQRM 690
Query: 610 ISL---GSPEDYERALRQG-PR--NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+ P + ++ +G R N A ++ E + + + IG G+
Sbjct: 691 WNYMYSKQPSVFVKSTEEGIARVLNSNYAFLL-ESTMNEYYRQRNCNLTQIGGLLDTKGY 749
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G S AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 750 GIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIF 809
Query: 724 LYLLCGTIT--FTAFLVFL 740
+ L+CG I F A L FL
Sbjct: 810 VVLICGLIVAIFMAMLEFL 828
Score = 79 (32.9 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 42/228 (18%), Positives = 85/228 (37%)
Query: 99 DITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSK 158
D T LL + ++H + I A +L M++ Y ++ T+ L +L+
Sbjct: 199 DPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN-LEFSLQRMDS 257
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWS-GMQQKGLVSAGLNTYGLYAYDTVWAV 217
+ + IL + + H ++ W L++ L+ D V+AV
Sbjct: 258 LVDDRVNILGFSIFNQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAV 315
Query: 218 ARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQ 277
++ + +N S E+ + +++ GT L+ L GL+G ++
Sbjct: 316 VTAVQE-LNR-------SQEIG---VKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIE 364
Query: 278 FNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
FN + ++ + ++G W G S+ L N+S
Sbjct: 365 FNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSM--DSHLYASNIS 410
>UNIPROTKB|E1C2Q1 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0042734 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
GO:GO:0032983 OMA:NRAPERL EMBL:AADN02041869 EMBL:AADN02041870
IPI:IPI00596764 ProteinModelPortal:E1C2Q1
Ensembl:ENSGALT00000010723 Uniprot:E1C2Q1
Length = 869
Score = 196 (74.1 bits), Expect = 7.1e-23, Sum P(3) = 7.1e-23
Identities = 56/226 (24%), Positives = 115/226 (50%)
Query: 374 EEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLV-KMVANDV 427
E + + +G+C+D+L E +++ ++ YK L GDG+ +N ++ G+V +++A
Sbjct: 422 ELEGNDRYEGFCVDMLKELAEILRFN--YKIHLVGDGVYGVPEANGTWTGMVGELIARKA 479
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAA 486
D AV + I R K++DFS+P+++ G+ I+ ++ K + FL PF+ +W
Sbjct: 480 -DLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLL 538
Query: 487 SFVMIAVVIWILEHRVNDDFRGP-PRRQ-----IATMFLFSFSTLFKTN----QEATVS- 535
+++ ++ V++++ ++ P P Q + + S F Q +T++
Sbjct: 539 AYLAVSCVLFLVARLTPYEWYSPHPCSQGRCNLLINQYSLGNSLWFPVGGFMQQGSTIAP 598
Query: 536 -SLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+L R I SSYTA+L++ LTVQ++ ++ ++ L
Sbjct: 599 QALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDL 644
Score = 128 (50.1 bits), Expect = 7.1e-23, Sum P(3) = 7.1e-23
Identities = 50/199 (25%), Positives = 86/199 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ ++ L + I Y G + ++ +S R+
Sbjct: 617 IISSYTANLAAFLTVQRMDVPIESVDDL-ADQTTIEYGTIHGGSSMTFFQNSRYQTYQRM 675
Query: 610 ISL---GSPEDYERALRQG-PR--NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+ P + ++ +G R N A ++ E + + + +G G+
Sbjct: 676 WNYMYSKQPSVFVKSTEEGIARVLNSNYAFLL-ESTMNEYYRQRNCNLTQVGGLLDTKGY 734
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G S AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 735 GIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIF 794
Query: 724 LYLLCGTIT--FTAFLVFL 740
+ L+CG I F A L FL
Sbjct: 795 VVLICGLIVAIFMAMLEFL 813
Score = 76 (31.8 bits), Expect = 7.1e-23, Sum P(3) = 7.1e-23
Identities = 43/233 (18%), Positives = 85/233 (36%)
Query: 96 NQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLES 155
+ D T LL + +VH + I A +L M + Y ++ T+ L +L+
Sbjct: 181 DSRDPTPLLKEIRDDKTATIIVHANASMSHTILQKAAELGMASAYYTYIFTN-LEFSLQR 239
Query: 156 FSKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWS-GMQQKGLVSAGLNTYGLYAYDTV 214
+ IL + + H ++ W L++ L+ D V
Sbjct: 240 LDSQLDDRVNILGFSIFNQSHAFFQEFVQSLNQSWQENCDHAPFTGPALSSALLF--DAV 297
Query: 215 WAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSG 274
+AV ++ + +N S E+ + +++ GT L+ L GL+G
Sbjct: 298 YAVVSAVQE-LNR-------SQEIG---VKPLSCGSAQIWQHGTSLMNYLRMVELEGLTG 346
Query: 275 QVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
++FN + ++ ++G+W G S+ + N+S S
Sbjct: 347 HIEFNSKGQRSNYALKILQHTHSGFRQIGHWHVSEGLSM--DNRIFSSNISDS 397
>RGD|2734 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=TAS] [GO:0007268
"synaptic transmission" evidence=TAS] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=TAS] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031960
"response to corticosteroid stimulus" evidence=IEP] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISO]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=TAS] [GO:0042734 "presynaptic membrane" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2734 GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 185 (70.2 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 53/220 (24%), Positives = 112/220 (50%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLV-KMVANDVFDAAVG 433
+ +G+C+D+L E +++ ++ YK L GDG+ +N ++ G+V +++A D AV
Sbjct: 443 RYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKA-DLAVA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R K++DFS+P+++ G+ I+ ++ + + L PF+ +W +++ ++
Sbjct: 500 GLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSSLDPFSPGVWLFMLLAYLAVS 559
Query: 493 VVIWILEHRVNDDFRGP-PRRQ-----IATMFLFSFSTLFKTN----QEATVS--SLG-R 539
V++++ ++ P P Q + + S F Q +T++ +L R
Sbjct: 560 CVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTR 619
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTVQ++ ++ ++ L
Sbjct: 620 CVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDL 659
Score = 129 (50.5 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ ++ L + I Y G + ++ +S R+
Sbjct: 632 IISSYTANLAAFLTVQRMEVPIESVDDL-ADQTAIEYGTIHGGSSMTFFQNSRYQTYQRM 690
Query: 610 ISL---GSPEDYERALRQG-PR--NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+ P + ++ +G R N A ++ E + + + IG G+
Sbjct: 691 WNYMYSKQPSVFVKSTEEGIARVLNSNYAFLL-ESTMNEYYRQRNCNLTQIGGLLDTKGY 749
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G S AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 750 GIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIF 809
Query: 724 LYLLCGTIT--FTAFLVFL 740
+ L+CG I F A L FL
Sbjct: 810 VVLICGLIVAIFMAMLEFL 828
Score = 84 (34.6 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 43/230 (18%), Positives = 86/230 (37%)
Query: 99 DITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSK 158
D T LL + ++H + I A +L M++ Y ++ T+ L +L+
Sbjct: 199 DPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN-LEFSLQRMDS 257
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWS-GMQQKGLVSAGLNTYGLYAYDTVWAV 217
+ + IL + + H ++ W L++ L+ D V+AV
Sbjct: 258 LVDDRVNILGFSIFNQSHAFFQEFSQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAV 315
Query: 218 ARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQ 277
++ + +N S E+ + +++ GT L+ L GL+G ++
Sbjct: 316 VTAVQE-LNR-------SQEIG---VKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIE 364
Query: 278 FNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
FN + ++ + ++G W G S+ L N+S S
Sbjct: 365 FNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSM--DSRLYASNISDS 412
>UNIPROTKB|Q01812 [details] [associations]
symbol:Grik4 "Glutamate receptor ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2734
GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 185 (70.2 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 53/220 (24%), Positives = 112/220 (50%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLV-KMVANDVFDAAVG 433
+ +G+C+D+L E +++ ++ YK L GDG+ +N ++ G+V +++A D AV
Sbjct: 443 RYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKA-DLAVA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R K++DFS+P+++ G+ I+ ++ + + L PF+ +W +++ ++
Sbjct: 500 GLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSSLDPFSPGVWLFMLLAYLAVS 559
Query: 493 VVIWILEHRVNDDFRGP-PRRQ-----IATMFLFSFSTLFKTN----QEATVS--SLG-R 539
V++++ ++ P P Q + + S F Q +T++ +L R
Sbjct: 560 CVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTR 619
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTVQ++ ++ ++ L
Sbjct: 620 CVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDL 659
Score = 129 (50.5 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ ++ L + I Y G + ++ +S R+
Sbjct: 632 IISSYTANLAAFLTVQRMEVPIESVDDL-ADQTAIEYGTIHGGSSMTFFQNSRYQTYQRM 690
Query: 610 ISL---GSPEDYERALRQG-PR--NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+ P + ++ +G R N A ++ E + + + IG G+
Sbjct: 691 WNYMYSKQPSVFVKSTEEGIARVLNSNYAFLL-ESTMNEYYRQRNCNLTQIGGLLDTKGY 749
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G S AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 750 GIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIF 809
Query: 724 LYLLCGTIT--FTAFLVFL 740
+ L+CG I F A L FL
Sbjct: 810 VVLICGLIVAIFMAMLEFL 828
Score = 84 (34.6 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 43/230 (18%), Positives = 86/230 (37%)
Query: 99 DITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSK 158
D T LL + ++H + I A +L M++ Y ++ T+ L +L+
Sbjct: 199 DPTPLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN-LEFSLQRMDS 257
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWS-GMQQKGLVSAGLNTYGLYAYDTVWAV 217
+ + IL + + H ++ W L++ L+ D V+AV
Sbjct: 258 LVDDRVNILGFSIFNQSHAFFQEFSQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAV 315
Query: 218 ARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQ 277
++ + +N S E+ + +++ GT L+ L GL+G ++
Sbjct: 316 VTAVQE-LNR-------SQEIG---VKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIE 364
Query: 278 FNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
FN + ++ + ++G W G S+ L N+S S
Sbjct: 365 FNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSM--DSRLYASNISDS 412
>UNIPROTKB|E7EMV5 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 HGNC:HGNC:4571 IPI:IPI00977433
ProteinModelPortal:E7EMV5 SMR:E7EMV5 Ensembl:ENST00000521843
ArrayExpress:E7EMV5 Bgee:E7EMV5 Uniprot:E7EMV5
Length = 839
Score = 154 (59.3 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 33/126 (26%), Positives = 68/126 (53%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 365 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 422
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 423 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 482
Query: 493 VVIWIL 498
VV++++
Sbjct: 483 VVLFLV 488
Score = 132 (51.5 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 55/217 (25%), Positives = 95/217 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTV+++ + ++ E L I Y + GS + + + +
Sbjct: 559 IISSYTANLAAFLTVERMVSPIESAEDL-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKM 617
Query: 609 LISLGS--PEDYERALRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRS 661
+ S P + R +G G A +++ + D +G
Sbjct: 618 WTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSK 677
Query: 662 GWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLI 719
G+G A + S L ++ A+LKL+E G+L KL KW+ +G C + L L
Sbjct: 678 GYGIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLS 737
Query: 720 SFWGL-YLLCGTITFTAFLVFLLRMVCQYVRYKQQQM 755
+ G+ Y+L G + A LV L+ C R + ++M
Sbjct: 738 NVAGVFYILIGGLGL-AMLVALIEF-CYKSRSESKRM 772
Score = 109 (43.4 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 63/276 (22%), Positives = 105/276 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +ID Y W++ + IY D D G + + L EKN + + + + +
Sbjct: 63 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRM 118
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
L + + R+ VV + I KL+ Y ++ + ++ L F S
Sbjct: 119 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 178
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGLNTY-GLYAYDTVW 215
N T +++ +T D+IP K + +W S + V Y YD V
Sbjct: 179 ANVTGFQLVN-------YT-DTIPAK-IMQQWKNSDARDHTRVDWKRPKYTSALTYDGVK 229
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + I S D A + G + R L Q F GL+G
Sbjct: 230 VMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLTGN 283
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
VQFN+ + VI + I ++GYW + F
Sbjct: 284 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 319
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 301 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 351
>UNIPROTKB|F1P7K5 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005767 Uniprot:F1P7K5
Length = 859
Score = 181 (68.8 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL------SNPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG +N ++G+V+ + + D
Sbjct: 405 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDANGQWNGMVRELIDHKAD 462
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 463 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 522
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 523 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 582
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 583 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 625
Score = 165 (63.1 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 76/338 (22%), Positives = 141/338 (41%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L VP + +S + +++ S A+ DL+ F+ WK V +Y
Sbjct: 69 VQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY 127
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G+ L +++ A Y L L ++ + D LL K G +V+
Sbjct: 128 -DDS---TGLIRLQELIK---APSRYNLRLKIRQLPADTKDAKPLLKEMKR-GKEFHVIF 179
Query: 119 -VSPDPGLRIFTTAQKLQMMTN--NYVWLATDWLSATLESF--SKMNQTSLRILQGVVGL 173
S + I A + MMT +Y++ D + +E + S +N T RIL
Sbjct: 180 DCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILN----- 234
Query: 174 RQHTP-DSIPKKAFLSRWSGMQQ--KGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNI 230
++T SI +K + R + GL+ + T YD V V+ + +F
Sbjct: 235 TENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVGVQQF------ 288
Query: 231 TFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGY 289
P + +Q + K + GT + + + ++ GL+G++ FN+ +
Sbjct: 289 --------PQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDL 340
Query: 290 DVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
DVI++ + + ++G W SG ++ + K N++ S
Sbjct: 341 DVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDS 378
Score = 127 (49.8 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 507 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 565
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 566 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 625
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 626 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 683
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 684 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 738
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 739 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 788
Score = 38 (18.4 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 177 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 220
>UNIPROTKB|F1P7K6 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IEA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005766 Uniprot:F1P7K6
Length = 891
Score = 181 (68.8 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL------SNPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG +N ++G+V+ + + D
Sbjct: 437 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDANGQWNGMVRELIDHKAD 494
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 495 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 554
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 555 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 614
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 615 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 657
Score = 165 (63.1 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 76/338 (22%), Positives = 141/338 (41%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L VP + +S + +++ S A+ DL+ F+ WK V +Y
Sbjct: 101 VQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY 159
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G+ L +++ A Y L L ++ + D LL K G +V+
Sbjct: 160 -DDS---TGLIRLQELIK---APSRYNLRLKIRQLPADTKDAKPLLKEMKR-GKEFHVIF 211
Query: 119 -VSPDPGLRIFTTAQKLQMMTN--NYVWLATDWLSATLESF--SKMNQTSLRILQGVVGL 173
S + I A + MMT +Y++ D + +E + S +N T RIL
Sbjct: 212 DCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILN----- 266
Query: 174 RQHTP-DSIPKKAFLSRWSGMQQ--KGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNI 230
++T SI +K + R + GL+ + T YD V V+ + +F
Sbjct: 267 TENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVGVQQF------ 320
Query: 231 TFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGY 289
P + +Q + K + GT + + + ++ GL+G++ FN+ +
Sbjct: 321 --------PQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDL 372
Query: 290 DVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
DVI++ + + ++G W SG ++ + K N++ S
Sbjct: 373 DVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDS 410
Score = 127 (49.8 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 539 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 597
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 598 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 657
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 658 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 715
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 716 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 770
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 771 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 820
Score = 38 (18.4 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 209 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 252
>UNIPROTKB|F1MG21 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 CTD:2898 KO:K05202 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:DAAA02026130 EMBL:DAAA02026131
EMBL:DAAA02026132 EMBL:DAAA02026133 EMBL:DAAA02026134
EMBL:DAAA02026135 EMBL:DAAA02026136 EMBL:DAAA02026137
EMBL:DAAA02026138 EMBL:DAAA02026139 EMBL:DAAA02026140
EMBL:DAAA02026141 EMBL:DAAA02026142 IPI:IPI00706450
RefSeq:NP_001179992.1 UniGene:Bt.32868 ProteinModelPortal:F1MG21
Ensembl:ENSBTAT00000015563 GeneID:615226 KEGG:bta:615226
NextBio:20899512 Uniprot:F1MG21
Length = 908
Score = 181 (68.8 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL------SNPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG +N ++G+V+ + + D
Sbjct: 454 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDANGQWNGMVRELIDHKAD 511
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 512 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 571
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 572 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 631
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 632 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 165 (63.1 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 76/338 (22%), Positives = 141/338 (41%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L VP + +S + +++ S A+ DL+ F+ WK V +Y
Sbjct: 118 VQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY 176
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G+ L +++ A Y L L ++ + D LL K G +V+
Sbjct: 177 -DDS---TGLIRLQELIK---APSRYNLRLKIRQLPADTKDAKPLLKEMKR-GKEFHVIF 228
Query: 119 -VSPDPGLRIFTTAQKLQMMTN--NYVWLATDWLSATLESF--SKMNQTSLRILQGVVGL 173
S + I A + MMT +Y++ D + +E + S +N T RIL
Sbjct: 229 DCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILN----- 283
Query: 174 RQHTP-DSIPKKAFLSRWSGMQQ--KGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNI 230
++T SI +K + R + GL+ + T YD V V+ + +F
Sbjct: 284 TENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVGVQQF------ 337
Query: 231 TFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGY 289
P + +Q + K + GT + + + ++ GL+G++ FN+ +
Sbjct: 338 --------PQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDL 389
Query: 290 DVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
DVI++ + + ++G W SG ++ + K N++ S
Sbjct: 390 DVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDS 427
Score = 127 (49.8 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 556 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 675 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 732
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 733 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 787
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 788 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 837
Score = 38 (18.4 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 226 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 269
>WB|WBGene00001614 [details] [associations]
symbol:glr-3 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HSSP:P19491 EMBL:Z75545 PIR:T23570 RefSeq:NP_492017.3
UniGene:Cel.19345 ProteinModelPortal:Q21415 SMR:Q21415
EnsemblMetazoa:K10D3.1 GeneID:172449 KEGG:cel:CELE_K10D3.1
UCSC:K10D3.1 CTD:172449 WormBase:K10D3.1 InParanoid:Q21415
OMA:RIVINIP NextBio:875561 ArrayExpress:Q21415 Uniprot:Q21415
Length = 836
Score = 208 (78.3 bits), Expect = 8.7e-22, Sum P(3) = 8.7e-22
Identities = 63/238 (26%), Positives = 115/238 (48%)
Query: 358 LRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVP--YDVP-YKFELFGDGLSNP 414
L+I V A FV +T + S+ +GYCID+L + ++ Y + + +G SN
Sbjct: 403 LKISVYLEAPFV-MITS-NGSY--EGYCIDLLHKIANILKFTYTIQKVRDNAYGSKESNG 458
Query: 415 SYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWV-FL 473
+ G+V + D AV + I R++++DF+ PY+ G+ I+ + S W F+
Sbjct: 459 KWSGMVGELQRGDADLAVASLTISYGRSEVIDFTVPYMHLGISILFKKPRIRDSDWFKFM 518
Query: 474 KPFTVEMWCVTAASFVMIAVVIWIL------EHRVNDDFRG---PPRRQIA--TMFLFSF 522
P + ++W +T AS+ +++V IWI+ E D+ G P Q + F F+
Sbjct: 519 DPLSTQVWIMTFASYFVVSVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWFTV 578
Query: 523 STLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+L + E + R + SSYTA+L+++LT +++ T ++ + L
Sbjct: 579 CSLMQQGSELCPRAASTRLLTGIWWFFALILISSYTANLAAVLTTRRMETPIENADDL 636
Score = 128 (50.1 bits), Expect = 8.7e-22, Sum P(3) = 8.7e-22
Identities = 50/197 (25%), Positives = 93/197 (47%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSR 608
+ SSYTA+L+++LT +++ T ++ + L I Y GS S+ ++S R
Sbjct: 609 LISSYTANLAAVLTTRRMETPIENADDLAAQT-KIKYGTLGRGS-TMSFFNESKIETYER 666
Query: 609 LISL--GSPEDYERALRQG-PR-NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ L SP + ++ ++G R A + E ++ + + IG + G+G
Sbjct: 667 MWQLMSSSPGLFVQSSKEGIARVKSSDYAYLMESSMLEYAVERDCELMQIGGLIDQKGYG 726
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG--CPEERRQHSEPHQLRLISFW 722
+ SP +STAIL+L E L +L EKW+ + C + +R+ + + S
Sbjct: 727 IGLPKGSPYRELISTAILRLQEKTELTELKEKWWKDKSVVCEQPKRKDQDDGE----SIG 782
Query: 723 GLYLLCGT-ITFTAFLV 738
G++++ + TA LV
Sbjct: 783 GIFIILVVGLVLTAVLV 799
Score = 52 (23.4 bits), Expect = 8.7e-22, Sum P(3) = 8.7e-22
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQF-PYFIRSTQSDSQQMAAMADLIDFYGWKEVIA 59
++ +A+ VP VS + PT + P+ + + A+A I WK+V+
Sbjct: 101 IVQSIADNTNVPCVSLHLSPPTRPSTHLHPHL-------NAKSLAVAAFIKREKWKDVVV 153
Query: 60 IYVDDD 65
++ + D
Sbjct: 154 VFEEPD 159
>WB|WBGene00001613 [details] [associations]
symbol:glr-2 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 EMBL:FO080148
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 KO:K05313
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 EMBL:AF318606
PIR:T15306 RefSeq:NP_001021113.1 RefSeq:NP_001021114.1
UniGene:Cel.19346 ProteinModelPortal:Q10914 SMR:Q10914
STRING:Q10914 PaxDb:Q10914 PRIDE:Q10914 EnsemblMetazoa:B0280.12b
GeneID:175999 KEGG:cel:CELE_B0280.12 UCSC:B0280.12b CTD:175999
WormBase:B0280.12a WormBase:B0280.12b InParanoid:Q10914 OMA:MTPPIES
NextBio:890672 Uniprot:Q10914
Length = 977
Score = 208 (78.3 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 104/451 (23%), Positives = 200/451 (44%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHEL 238
DSIP A + + + + +N +G +D + V + F + HE
Sbjct: 324 DSIPTAAAFAHDAILVAGKALQIAMNEHGKGIFDKSF-VRHQL--FNRGRKGLYCRPHE- 379
Query: 239 PDSKATRVQLEQLKVFDGGTFL---LRKLLQTNFTG-LSGQVQFNQ-DRNIVSRGYDVIN 293
D +R Q + F+ G + ++K++ T+ G L+G++QF++ + +++
Sbjct: 380 -DQTESR----QFETFEHGKKIAEAIKKVVLTDKDGTLTGRIQFDKVTGKRTNFSAEIVE 434
Query: 294 IDKMEIHRVG------YWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPR 347
I K ++ + W +G GF + ++ K SQ + I P K R
Sbjct: 435 I-KPGVNSLNSIWERFQWAEGEGFLLGGERYVQEKKKDSSQTR---KGIL-PS-KPWQLR 488
Query: 348 GWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDIL-LEALKLV--PYDVPYKF 404
V+ +P + + RR G E + + +GYCID+L L A + YDV
Sbjct: 489 FNVVTVLVKPF-VMLKRRNP--G-EPELKGNDRFEGYCIDLLNLLAKNITGFEYDVFISD 544
Query: 405 -ELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPI 462
+G ++ S+DG++ + N+ D AV + I R + VDFS+P+++TG+ +++
Sbjct: 545 GNKYGSRQADGSWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKP 604
Query: 463 NNHKASAWVFLKPFTVEMWCVTAASFVMIAVVI----WILEHRVNDDF-RGP-PRRQIAT 516
+ + + F++P + +W T +S+ +++ I W + +F RG T
Sbjct: 605 EKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFT 664
Query: 517 MFLFSFSTLFKTNQEATV----SSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTS 572
++ + TL Q+ T + GR I SSYTA+L++ LT+++++
Sbjct: 665 LYNSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFLTLERMTPP 724
Query: 573 VKGIESLIT-NDWPIGYQVGSFAYSYLSDSL 602
++ +E L N G G ++ DS+
Sbjct: 725 IESVEDLANQNKILYGVNEGGSTAAFFEDSI 755
Score = 116 (45.9 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 33/94 (35%), Positives = 45/94 (47%)
Query: 654 IGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSE 712
+GQ G+G A + +PL V ++ AIL LSE G L+KL KW+ G C
Sbjct: 831 VGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGELKKLENKWWYDRGQCDTGTSDGGT 890
Query: 713 PHQLRLISFWGLY--LLCGTITF--TAFLVFLLR 742
L L G++ LL G + TA + FL R
Sbjct: 891 SSSLNLSKVAGIFYILLAGMVLSMCTALVEFLFR 924
Score = 66 (28.3 bits), Expect = 1.0e-21, Sum P(3) = 1.0e-21
Identities = 19/76 (25%), Positives = 39/76 (51%)
Query: 4 EVANGLKVPLVSF--AATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
++AN +K+PL+ + + ++ + I S ++Q+ + D I + GW++V+ Y
Sbjct: 111 DIANHMKMPLIDWEPSKSENIGKTTENNPMIFSVAPSAEQL--LIDYIQYKGWRDVV--Y 166
Query: 62 VDDDYGRNGISALSNM 77
+ D G+N L M
Sbjct: 167 IHD--GKNADRTLRTM 180
>UNIPROTKB|F8WEZ8 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0051402 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 EMBL:AL109919
EMBL:AP002528 EMBL:AP002529 EMBL:AP002530 HGNC:HGNC:4580
IPI:IPI01012035 ProteinModelPortal:F8WEZ8 SMR:F8WEZ8
Ensembl:ENST00000369134 ArrayExpress:F8WEZ8 Bgee:F8WEZ8
Uniprot:F8WEZ8
Length = 859
Score = 181 (68.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL------SNPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG +N ++G+V+ + + D
Sbjct: 405 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDANGQWNGMVRELIDHKAD 462
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 463 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 522
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 523 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 582
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 583 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 625
Score = 162 (62.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 76/312 (24%), Positives = 136/312 (43%)
Query: 31 FIRSTQSDSQQMA-AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKL 89
F S D ++ A+ DL+ F+ WK V +Y DD G+ L +++ A Y L
Sbjct: 96 FYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIK---APSRYNL 148
Query: 90 PLPVQ---FNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRIFTTAQKLQMMTN--NYVW 143
L ++ + D LL K G +V+ S + I A + MMT +Y++
Sbjct: 149 RLKIRQLPADTKDAKPLLKEMKR-GKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIF 207
Query: 144 LATDWLSATLESF--SKMNQTSLRILQGVVGLRQHTP-DSIPKKAFLSRWSGMQQ--KGL 198
D + +E + S +N T RIL ++T SI +K + R + GL
Sbjct: 208 TTLDLFALDVEPYRYSGVNMTGFRILN-----TENTQVSSIIEKWSMERLQAPPKPDSGL 262
Query: 199 VSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGT 258
+ + T YD V V+ ++ +F P + +Q + K + GT
Sbjct: 263 LDGFMTTDAALMYDAVHVVSVAVQQF--------------PQMTVSSLQCNRHKPWRFGT 308
Query: 259 FLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPE 317
+ + + ++ GL+G++ FN+ + DVI++ + + ++G W SG ++ E
Sbjct: 309 RFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT--E 366
Query: 318 TLKGK--NVSHS 327
+ KGK N++ S
Sbjct: 367 SQKGKPANITDS 378
Score = 127 (49.8 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 507 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 565
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 566 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 625
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 626 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 683
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 684 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 738
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 739 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 788
Score = 38 (18.4 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 177 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 220
>UNIPROTKB|Q13002 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001662 "behavioral
fear response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IMP] [GO:0050804 "regulation
of synaptic transmission" evidence=IDA] [GO:0050806 "positive
regulation of synaptic transmission" evidence=IMP] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=NAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0005887 GO:GO:0051967 GO:GO:0007268 EMBL:CH471051
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 DrugBank:DB00142 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
Orphanet:88616 GO:GO:0050806 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:U16126
EMBL:AJ252246 EMBL:AJ301608 EMBL:AJ301609 EMBL:AJ301610
EMBL:HM149335 EMBL:HM149336 EMBL:HM149337 EMBL:HM149338
EMBL:HM149339 EMBL:AL109919 EMBL:AP002528 EMBL:AP002529
EMBL:AP002530 IPI:IPI00011396 IPI:IPI00396613 IPI:IPI00642591
IPI:IPI00746275 IPI:IPI00815931 PIR:A54260 RefSeq:NP_001159719.1
RefSeq:NP_068775.1 RefSeq:NP_786944.1 UniGene:Hs.98262 PDB:3QXM
PDBsum:3QXM ProteinModelPortal:Q13002 SMR:Q13002 IntAct:Q13002
STRING:Q13002 PhosphoSite:Q13002 DMDM:2492627 PaxDb:Q13002
PRIDE:Q13002 DNASU:2898 Ensembl:ENST00000318991
Ensembl:ENST00000369137 Ensembl:ENST00000369138
Ensembl:ENST00000413795 Ensembl:ENST00000421544 GeneID:2898
KEGG:hsa:2898 UCSC:uc003pqn.3 UCSC:uc003pqo.4 UCSC:uc010kcw.3
CTD:2898 GeneCards:GC06P101846 H-InvDB:HIX0006094 HGNC:HGNC:4580
HPA:CAB022463 HPA:HPA014395 HPA:HPA014623 MIM:138244 MIM:611092
neXtProt:NX_Q13002 PharmGKB:PA164741600 InParanoid:Q13002 KO:K05202
OMA:VNGQWNG OrthoDB:EOG41C6VH PhylomeDB:Q13002 BindingDB:Q13002
ChEMBL:CHEMBL3683 GenomeRNAi:2898 NextBio:11469 ArrayExpress:Q13002
Bgee:Q13002 CleanEx:HS_GRIK2 Genevestigator:Q13002
GermOnline:ENSG00000164418 Uniprot:Q13002
Length = 908
Score = 181 (68.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 53/223 (23%), Positives = 101/223 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL------SNPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG +N ++G+V+ + + D
Sbjct: 454 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDANGQWNGMVRELIDHKAD 511
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 512 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 571
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 572 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 631
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 632 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 162 (62.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 76/312 (24%), Positives = 136/312 (43%)
Query: 31 FIRSTQSDSQQMA-AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKL 89
F S D ++ A+ DL+ F+ WK V +Y DD G+ L +++ A Y L
Sbjct: 145 FYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIK---APSRYNL 197
Query: 90 PLPVQ---FNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRIFTTAQKLQMMTN--NYVW 143
L ++ + D LL K G +V+ S + I A + MMT +Y++
Sbjct: 198 RLKIRQLPADTKDAKPLLKEMKR-GKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIF 256
Query: 144 LATDWLSATLESF--SKMNQTSLRILQGVVGLRQHTP-DSIPKKAFLSRWSGMQQ--KGL 198
D + +E + S +N T RIL ++T SI +K + R + GL
Sbjct: 257 TTLDLFALDVEPYRYSGVNMTGFRILN-----TENTQVSSIIEKWSMERLQAPPKPDSGL 311
Query: 199 VSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGT 258
+ + T YD V V+ ++ +F P + +Q + K + GT
Sbjct: 312 LDGFMTTDAALMYDAVHVVSVAVQQF--------------PQMTVSSLQCNRHKPWRFGT 357
Query: 259 FLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPE 317
+ + + ++ GL+G++ FN+ + DVI++ + + ++G W SG ++ E
Sbjct: 358 RFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT--E 415
Query: 318 TLKGK--NVSHS 327
+ KGK N++ S
Sbjct: 416 SQKGKPANITDS 427
Score = 127 (49.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 556 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 675 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 732
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 733 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 787
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 788 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 837
Score = 38 (18.4 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 226 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 269
>UNIPROTKB|Q38PU3 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9541 "Macaca fascicularis" [GO:0030424 "axon" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0030424 GO:GO:0043197 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159934
HSSP:P22756 ProteinModelPortal:Q38PU3 SMR:Q38PU3 Uniprot:Q38PU3
Length = 908
Score = 180 (68.4 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 56/223 (25%), Positives = 101/223 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL------SNPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG +N ++G+V+ + + D
Sbjct: 454 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDANGQWNGMVRELIDHKAD 511
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMW------C 482
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W C
Sbjct: 512 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLAC 571
Query: 483 --VTAASFVM--IAVVIWILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
V+ FV+ + W H N D + F F L + E +L
Sbjct: 572 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQGSELMPKAL 631
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 632 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 162 (62.1 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 76/312 (24%), Positives = 136/312 (43%)
Query: 31 FIRSTQSDSQQMA-AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKL 89
F S D ++ A+ DL+ F+ WK V +Y DD G+ L +++ A Y L
Sbjct: 145 FYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIK---APSRYNL 197
Query: 90 PLPVQ---FNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRIFTTAQKLQMMTN--NYVW 143
L ++ + D LL K G +V+ S + I A + MMT +Y++
Sbjct: 198 RLKIRQLPADTKDAKPLLKEMKR-GKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIF 256
Query: 144 LATDWLSATLESF--SKMNQTSLRILQGVVGLRQHTP-DSIPKKAFLSRWSGMQQ--KGL 198
D + +E + S +N T RIL ++T SI +K + R + GL
Sbjct: 257 TTLDLFALDVEPYRYSGVNMTGFRILN-----TENTQVSSIIEKWSMERLQAPPKPDSGL 311
Query: 199 VSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGT 258
+ + T YD V V+ ++ +F P + +Q + K + GT
Sbjct: 312 LDGFMTTDAALMYDAVHVVSVAVQQF--------------PQMTVSSLQCNRHKPWRFGT 357
Query: 259 FLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPE 317
+ + + ++ GL+G++ FN+ + DVI++ + + ++G W SG ++ E
Sbjct: 358 RFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT--E 415
Query: 318 TLKGK--NVSHS 327
+ KGK N++ S
Sbjct: 416 SQKGKPANITDS 427
Score = 128 (50.1 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 556 LNPLSPDIWMYVLLACLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 615 GVGALMRQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 675 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 732
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 733 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 787
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 788 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 837
Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 226 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 269
>UNIPROTKB|F1LP48 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation
of synaptic transmission" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
IPI:IPI00324708 PRIDE:F1LP48 Ensembl:ENSRNOT00000000415
ArrayExpress:F1LP48 Uniprot:F1LP48
Length = 870
Score = 178 (67.7 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLS------NPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG N ++G+V+ + + D
Sbjct: 416 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKAD 473
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 474 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 533
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 534 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 593
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 594 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 636
Score = 162 (62.1 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 76/312 (24%), Positives = 136/312 (43%)
Query: 31 FIRSTQSDSQQMA-AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKL 89
F S D ++ A+ DL+ F+ WK V +Y DD G+ L +++ A Y L
Sbjct: 107 FYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIK---APSRYNL 159
Query: 90 PLPVQ---FNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRIFTTAQKLQMMTN--NYVW 143
L ++ + D LL K G +V+ S + I A + MMT +Y++
Sbjct: 160 RLKIRQLPADTKDAKPLLKEMKR-GKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIF 218
Query: 144 LATDWLSATLESF--SKMNQTSLRILQGVVGLRQHTP-DSIPKKAFLSRWSGMQQ--KGL 198
D + +E + S +N T RIL ++T SI +K + R + GL
Sbjct: 219 TTLDLFALDVEPYRYSGVNMTGFRILN-----TENTQVSSIIEKWSMERLQAPPKPDSGL 273
Query: 199 VSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGT 258
+ + T YD V V+ ++ +F P + +Q + K + GT
Sbjct: 274 LDGFMTTDAALMYDAVHVVSVAVQQF--------------PQMTVSSLQCNRHKPWRFGT 319
Query: 259 FLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPE 317
+ + + ++ GL+G++ FN+ + DVI++ + + ++G W SG ++ E
Sbjct: 320 RFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT--E 377
Query: 318 TLKGK--NVSHS 327
+ KGK N++ S
Sbjct: 378 SQKGKPANITDS 389
Score = 127 (49.8 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 518 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 576
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 577 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 636
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 637 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 694
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 695 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 749
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 750 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 799
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 188 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 231
>MGI|MGI:95815 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2 (beta
2)" species:10090 "Mus musculus" [GO:0001662 "behavioral fear
response" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IGI;IMP] [GO:0008066
"glutamate receptor activity" evidence=ISO] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=ISO;IC] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP;IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP]
[GO:0042391 "regulation of membrane potential"
evidence=IGI;IMP;IDA] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043113
"receptor clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IGI]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;TAS] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0046328 "regulation of
JNK cascade" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=ISO;IMP]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IGI] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IGI;IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95815 Pfam:PF01094
GO:GO:0006886 GO:GO:0016020 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0043204
GO:GO:0051402 GO:GO:0045202 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249
GO:GO:0005622 GO:GO:0006874 GO:GO:0019228 GO:GO:0043113
GO:GO:0032839 GO:GO:0046328 GO:GO:0001662 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 eggNOG:NOG316680
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
OrthoDB:EOG41C6VH EMBL:X66117 EMBL:D10054 EMBL:U31443 EMBL:AC113305
IPI:IPI00131566 IPI:IPI00223171 PIR:A43954 PIR:S35792
UniGene:Mm.332838 ProteinModelPortal:P39087 SMR:P39087
IntAct:P39087 STRING:P39087 PhosphoSite:P39087 PaxDb:P39087
PRIDE:P39087 Ensembl:ENSMUST00000079751 Ensembl:ENSMUST00000105484
Ensembl:ENSMUST00000105485 Ensembl:ENSMUST00000105487
GeneTree:ENSGT00590000083056 InParanoid:P39087 Bgee:P39087
Genevestigator:P39087 GermOnline:ENSMUSG00000056073 Uniprot:P39087
Length = 908
Score = 178 (67.7 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLS------NPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG N ++G+V+ + + D
Sbjct: 454 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKAD 511
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 512 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 571
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 572 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 631
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 632 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 162 (62.1 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 76/312 (24%), Positives = 136/312 (43%)
Query: 31 FIRSTQSDSQQMA-AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKL 89
F S D ++ A+ DL+ F+ WK V +Y DD G+ L +++ A Y L
Sbjct: 145 FYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIK---APSRYNL 197
Query: 90 PLPVQ---FNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRIFTTAQKLQMMTN--NYVW 143
L ++ + D LL K G +V+ S + I A + MMT +Y++
Sbjct: 198 RLKIRQLPADTKDAKPLLKEMKR-GKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIF 256
Query: 144 LATDWLSATLESF--SKMNQTSLRILQGVVGLRQHTP-DSIPKKAFLSRWSGMQQ--KGL 198
D + +E + S +N T RIL ++T SI +K + R + GL
Sbjct: 257 TTLDLFALDVEPYRYSGVNMTGFRILN-----TENTQVSSIIEKWSMERLQAPPKPDSGL 311
Query: 199 VSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGT 258
+ + T YD V V+ ++ +F P + +Q + K + GT
Sbjct: 312 LDGFMTTDAALMYDAVHVVSVAVQQF--------------PQMTVSSLQCNRHKPWRFGT 357
Query: 259 FLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPE 317
+ + + ++ GL+G++ FN+ + DVI++ + + ++G W SG ++ E
Sbjct: 358 RFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPSSGLNMT--E 415
Query: 318 TLKGK--NVSHS 327
+ KGK N++ S
Sbjct: 416 SQKGKPANITDS 427
Score = 127 (49.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 556 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 675 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 732
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 733 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 787
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 788 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 837
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 226 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 269
>RGD|2733 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA;ISO;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0008066 "glutamate receptor activity" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO;IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0030424 "axon"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=IPI] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0032839
"dendrite cytoplasm" evidence=IDA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;TAS] [GO:0035249
"synaptic transmission, glutamatergic" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043113 "receptor clustering" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=ISO] [GO:0043525 "positive regulation of neuron
apoptotic process" evidence=IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0046328
"regulation of JNK cascade" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048172
"regulation of short-term neuronal synaptic plasticity" evidence=ISO]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=IMP]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0051402 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708 PIR:S19098
RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y PDB:1S9T
PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR PDB:2XXT
PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F PDB:3G3G
PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H PDB:3QLT
PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T PDBsum:1SD3
PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C PDBsum:2XXR
PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW PDBsum:2XXX
PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H PDBsum:3G3I
PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H PDBsum:3QLT
PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260 SMR:P42260
DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260 PRIDE:P42260
GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733 InParanoid:P42260
BindingDB:P42260 ChEMBL:CHEMBL3607 EvolutionaryTrace:P42260
NextBio:610770 ArrayExpress:P42260 Genevestigator:P42260
GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 178 (67.7 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLS------NPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG N ++G+V+ + + D
Sbjct: 454 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKAD 511
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 512 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 571
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 572 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 631
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 632 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 162 (62.1 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 76/312 (24%), Positives = 136/312 (43%)
Query: 31 FIRSTQSDSQQMA-AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKL 89
F S D ++ A+ DL+ F+ WK V +Y DD G+ L +++ A Y L
Sbjct: 145 FYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIK---APSRYNL 197
Query: 90 PLPVQ---FNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRIFTTAQKLQMMTN--NYVW 143
L ++ + D LL K G +V+ S + I A + MMT +Y++
Sbjct: 198 RLKIRQLPADTKDAKPLLKEMKR-GKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIF 256
Query: 144 LATDWLSATLESF--SKMNQTSLRILQGVVGLRQHTP-DSIPKKAFLSRWSGMQQ--KGL 198
D + +E + S +N T RIL ++T SI +K + R + GL
Sbjct: 257 TTLDLFALDVEPYRYSGVNMTGFRILN-----TENTQVSSIIEKWSMERLQAPPKPDSGL 311
Query: 199 VSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGT 258
+ + T YD V V+ ++ +F P + +Q + K + GT
Sbjct: 312 LDGFMTTDAALMYDAVHVVSVAVQQF--------------PQMTVSSLQCNRHKPWRFGT 357
Query: 259 FLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPE 317
+ + + ++ GL+G++ FN+ + DVI++ + + ++G W SG ++ E
Sbjct: 358 RFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT--E 415
Query: 318 TLKGK--NVSHS 327
+ KGK N++ S
Sbjct: 416 SQKGKPANITDS 427
Score = 127 (49.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 556 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 675 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 732
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 733 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 787
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 788 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 837
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 226 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 269
>UNIPROTKB|P42260 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228
GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708
PIR:S19098 RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y
PDB:1S9T PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR
PDB:2XXT PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F
PDB:3G3G PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H
PDB:3QLT PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T
PDBsum:1SD3 PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C
PDBsum:2XXR PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW
PDBsum:2XXX PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H
PDBsum:3G3I PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H
PDBsum:3QLT PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260
SMR:P42260 DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260
PRIDE:P42260 GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733
InParanoid:P42260 BindingDB:P42260 ChEMBL:CHEMBL3607
EvolutionaryTrace:P42260 NextBio:610770 ArrayExpress:P42260
Genevestigator:P42260 GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 178 (67.7 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 53/223 (23%), Positives = 100/223 (44%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLS------NPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG N ++G+V+ + + D
Sbjct: 454 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKAD 511
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 512 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 571
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 572 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 631
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 632 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 162 (62.1 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 76/312 (24%), Positives = 136/312 (43%)
Query: 31 FIRSTQSDSQQMA-AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKL 89
F S D ++ A+ DL+ F+ WK V +Y DD G+ L +++ A Y L
Sbjct: 145 FYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIK---APSRYNL 197
Query: 90 PLPVQ---FNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRIFTTAQKLQMMTN--NYVW 143
L ++ + D LL K G +V+ S + I A + MMT +Y++
Sbjct: 198 RLKIRQLPADTKDAKPLLKEMKR-GKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIF 256
Query: 144 LATDWLSATLESF--SKMNQTSLRILQGVVGLRQHTP-DSIPKKAFLSRWSGMQQ--KGL 198
D + +E + S +N T RIL ++T SI +K + R + GL
Sbjct: 257 TTLDLFALDVEPYRYSGVNMTGFRILN-----TENTQVSSIIEKWSMERLQAPPKPDSGL 311
Query: 199 VSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGT 258
+ + T YD V V+ ++ +F P + +Q + K + GT
Sbjct: 312 LDGFMTTDAALMYDAVHVVSVAVQQF--------------PQMTVSSLQCNRHKPWRFGT 357
Query: 259 FLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPE 317
+ + + ++ GL+G++ FN+ + DVI++ + + ++G W SG ++ E
Sbjct: 358 RFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLDVISLKEEGLEKIGTWDPASGLNMT--E 415
Query: 318 TLKGK--NVSHS 327
+ KGK N++ S
Sbjct: 416 SQKGKPANITDS 427
Score = 127 (49.8 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 556 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 675 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 732
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 733 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 787
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 788 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 837
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 226 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 269
>ZFIN|ZDB-GENE-070821-5 [details] [associations]
symbol:grik4 "glutamate receptor, ionotropic, kainate
4" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:BX571886 EMBL:BX572079 EMBL:CR626883
EMBL:CU104717 IPI:IPI00505029 Ensembl:ENSDART00000035812
Uniprot:E7F1P4
Length = 965
Score = 182 (69.1 bits), Expect = 5.8e-21, Sum P(3) = 5.8e-21
Identities = 50/225 (22%), Positives = 106/225 (47%)
Query: 374 EEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVF 428
E + + +G+C+D+L E ++ + Y+ L GDG+ +N ++ G+V + +
Sbjct: 437 ELEGNDRYEGFCVDMLKELADILKFK--YRIRLVGDGVYGVPGANGTWTGMVGELISRKA 494
Query: 429 DAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAAS 487
D AV + I R K++DFS+P+++ G+ I+ ++ + + FL PF+ +W +
Sbjct: 495 DLAVAALTITAEREKVIDFSKPFMTLGISIMYRVHIGRRPGYFSFLDPFSPGVWLFMLLA 554
Query: 488 FVMIAVVIWILEHRVNDDFRGP-P-----------RRQIATMFLFSFSTLFKTNQEATVS 535
++ ++ V++++ ++ P P + + F F +
Sbjct: 555 YLAVSCVLFLVARLTPYEWYNPHPCLKGRCSLLINQYSLGNSFWFPVGGFMQQGSTIAPR 614
Query: 536 SLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+L R I SSYTA+L++ LTVQ++ ++ ++ L
Sbjct: 615 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDL 659
Score = 118 (46.6 bits), Expect = 5.8e-21, Sum P(3) = 5.8e-21
Identities = 48/199 (24%), Positives = 84/199 (42%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ ++ L + I Y G ++ +S R+
Sbjct: 632 IISSYTANLAAFLTVQRMEVPIESVDDL-ADQTAIEYGTMHGGSTMTFFQNSRYQTYQRM 690
Query: 610 ISL---GSPEDYERALRQG-PR--NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+ P + ++ +G R N A ++ E + + + IG G+
Sbjct: 691 WNFMYSKQPSVFVKSTEEGIARVLNSNYAYLL-ESTMNEYYRQRNCNLTQIGGLLDTKGY 749
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G S AIL+L E L+ L KW+ CP+E ++ + I
Sbjct: 750 GIGMPLGSVYRDEFDLAILRLQEENRLEILKRKWWDGGKCPKEEDHRAKGLGMENIGGIF 809
Query: 724 LYLLCGTIT--FTAFLVFL 740
+ L+CG + F A L F+
Sbjct: 810 VVLVCGLLVAIFMAVLEFV 828
Score = 84 (34.6 bits), Expect = 5.8e-21, Sum P(3) = 5.8e-21
Identities = 21/89 (23%), Positives = 42/89 (47%)
Query: 228 HNITFSASHELPDSK---ATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNI 284
H + +A EL S+ AT++ + K+++ GT L+ L GL+G ++FN
Sbjct: 313 HTVV-AAVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEGLTGHIEFNSKGQR 371
Query: 285 VSRGYDVINIDKMEIHRVGYWFDGSGFSV 313
+ ++ + + ++G W G S+
Sbjct: 372 SNYALRIMQNSRDGLRQIGQWHSEQGLSM 400
>UNIPROTKB|F1NU20 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0019228 "regulation of action
potential in neuron" evidence=IEA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=IEA]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0051967
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0042734
GO:GO:0043524 GO:GO:0005622 GO:GO:0042391 GO:GO:0006874
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AADN02002208 EMBL:AADN02002209
EMBL:AADN02002210 EMBL:AADN02002211 EMBL:AADN02002212
EMBL:AADN02002213 EMBL:AADN02002214 EMBL:AADN02002215
EMBL:AADN02002216 EMBL:AADN02002217 EMBL:AADN02002218
EMBL:AADN02002219 EMBL:AADN02002220 EMBL:AADN02002221
EMBL:AADN02002222 IPI:IPI00573083 ProteinModelPortal:F1NU20
Ensembl:ENSGALT00000024893 Uniprot:F1NU20
Length = 877
Score = 177 (67.4 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 52/223 (23%), Positives = 101/223 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL------SNPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG ++ ++G+V+ + + D
Sbjct: 423 YGNDRFEGYCIDLLRELSTILGFS--YEIRLVEDGKYGAQEDASGQWNGMVRELIDHKAD 480
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 481 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 540
Query: 489 VMIAVVI----------WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSL 537
+ ++ V+ W H N D + F F L + E +L
Sbjct: 541 LGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKAL 600
Query: 538 G-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 601 STRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 643
Score = 159 (61.0 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 76/311 (24%), Positives = 132/311 (42%)
Query: 31 FIRSTQSDSQQMA-AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKL 89
F S D ++ A+ DL+ F+ WK V +Y DD G+ L +++ A Y L
Sbjct: 114 FYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY-DDS---TGLIRLQELIK---APSRYNL 166
Query: 90 PLPVQ---FNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRIFTTAQKLQMMTN--NYVW 143
L ++ + D LL K G +V+ S + I A + MMT +Y++
Sbjct: 167 RLKIRQLPADTKDAKPLLKEMKR-GKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIF 225
Query: 144 LATDWLSATLESF--SKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQ--KGLV 199
D + +E + S +N T RIL SI +K + R + GL+
Sbjct: 226 TTLDLFALDVEPYRYSGVNMTGFRILN----TENSQVSSIIEKWSMERLQAPPKPDSGLL 281
Query: 200 SAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTF 259
+ T YD V V+ ++ +F P + +Q + K + GT
Sbjct: 282 DGFMTTDAALMYDAVHVVSVAVQQF--------------PQMTVSSLQCNRHKPWRFGTR 327
Query: 260 LLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPET 318
+ + + ++ GL+G++ FN+ + DVI++ + + +VG W SG ++ E
Sbjct: 328 FMSLIKEAHWEGLTGRITFNKSNGLRTDFDLDVISLKEEGLEKVGTWDPLSGLNMT--EN 385
Query: 319 LKGK--NVSHS 327
KGK N++ S
Sbjct: 386 QKGKPANITDS 396
Score = 127 (49.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 66/292 (22%), Positives = 111/292 (38%)
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRR-QIATMFLF 520
+N W+++ + + CV + W H N D + F F
Sbjct: 525 LNPLSPDIWMYILLAYLGVSCVLFV-IARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 583
Query: 521 SFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L + E +L R I SSYTA+L++ LTV+++ + + + L
Sbjct: 584 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 643
Query: 580 ITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISL---GSPEDYERALRQGP 626
I Y + G+ F S +S D + SR S+ + E +R L
Sbjct: 644 -AKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQSVLVKSNEEGIQRVLTSD- 701
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
A + E ++ + IG G+G SP ++ AIL+L E
Sbjct: 702 -----YAFLMESTTIEFVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQE 756
Query: 687 NGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYL-LCGTITFTAFL 737
G L + EKW+ GCPEE + E L + + G+++ L + + F+
Sbjct: 757 EGKLHMMKEKWWRGNGCPEE--ESKEASALGVQNIGGIFIVLAAGLVLSVFV 806
Score = 38 (18.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPY 398
VI D + + G+ ++A +G +TE + H + +D+ AL + PY
Sbjct: 195 VIFDCSHEMAAGILKQALAMGMMTEYY--HYIFT-TLDLF--ALDVEPY 238
>UNIPROTKB|E7EPZ0 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792601
ProteinModelPortal:E7EPZ0 SMR:E7EPZ0 Ensembl:ENST00000399909
ArrayExpress:E7EPZ0 Bgee:E7EPZ0 Uniprot:E7EPZ0
Length = 903
Score = 168 (64.2 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 50/220 (22%), Positives = 101/220 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSNPS--YDGLVKMVANDVFDAAV 432
+ + + +GYC+D+L E ++ + K G G N ++G+VK + + D AV
Sbjct: 455 YGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAV 514
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 515 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 574
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 575 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 634
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 165 (63.1 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 74/335 (22%), Positives = 133/335 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAILDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 178 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 231
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 232 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 288
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 289 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 333
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVI 292
ASH + +Q + K + G + + + + GL+G + FN+ + D+I
Sbjct: 334 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDII 393
Query: 293 NIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
++ + ++G W SG ++ K N++ S
Sbjct: 394 SLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDS 428
Score = 125 (49.1 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 58/254 (22%), Positives = 97/254 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 589 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 648
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 649 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 707
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 708 FMSSRQ--QTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 765
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
SP ++ AIL+L E G L + EKW+ GCPEE + E L + + G+
Sbjct: 766 VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DNKEASALGVENIGGI 823
Query: 725 YL-LCGTITFTAFL 737
++ L + + F+
Sbjct: 824 FIVLAAGLVLSVFV 837
>UNIPROTKB|E7EPY9 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790891
ProteinModelPortal:E7EPY9 SMR:E7EPY9 Ensembl:ENST00000399914
ArrayExpress:E7EPY9 Bgee:E7EPY9 Uniprot:E7EPY9
Length = 934
Score = 168 (64.2 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 50/220 (22%), Positives = 101/220 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSNPS--YDGLVKMVANDVFDAAV 432
+ + + +GYC+D+L E ++ + K G G N ++G+VK + + D AV
Sbjct: 455 YGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAV 514
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 515 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 574
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 575 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 634
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 165 (63.1 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 74/335 (22%), Positives = 133/335 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAILDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 178 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 231
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 232 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 288
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 289 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 333
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVI 292
ASH + +Q + K + G + + + + GL+G + FN+ + D+I
Sbjct: 334 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDII 393
Query: 293 NIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
++ + ++G W SG ++ K N++ S
Sbjct: 394 SLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDS 428
Score = 125 (49.1 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 58/254 (22%), Positives = 97/254 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 589 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 648
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 649 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 707
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 708 FMSSRQ--QTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 765
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
SP ++ AIL+L E G L + EKW+ GCPEE + E L + + G+
Sbjct: 766 VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DNKEASALGVENIGGI 823
Query: 725 YL-LCGTITFTAFL 737
++ L + + F+
Sbjct: 824 FIVLAAGLVLSVFV 837
>ZFIN|ZDB-GENE-020125-7 [details] [associations]
symbol:gria4a "glutamate receptor, ionotropic, AMPA
4a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-7 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05200 EMBL:AF525747
IPI:IPI01016706 RefSeq:NP_999971.1 UniGene:Dr.89716
ProteinModelPortal:Q71E59 SMR:Q71E59 GeneID:407735 KEGG:dre:407735
CTD:407735 NextBio:20818588 Uniprot:Q71E59
Length = 898
Score = 146 (56.5 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 32/128 (25%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + + YK + DG +P ++G+V + + A
Sbjct: 434 NEQFEGYCVDLASEVAKHI--GIKYKISIVLDGKYGARDPETKIWNGMVGELVYGKAEIA 491
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V +AI R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 492 VAPLAITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 551
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 552 VSVVLFLV 559
Score = 139 (54.0 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 66/263 (25%), Positives = 109/263 (41%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + T SL GR I SSYTA+L++ LTV
Sbjct: 584 PPNEFGIFNSLWFSLGAFMQQGCDFTPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 643
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGSPED--YERA 621
+++ + ++ E L I Y GS + + + + + S E + +
Sbjct: 644 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPTVFTKT 702
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ D +G G+G A + S L
Sbjct: 703 TAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSQLGTP 762
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQ-LRLISFWGL-YLLCGTIT 732
++ A+LKLSE G+L KL KW+ +G C P++ + Q L L + G+ Y+L G +
Sbjct: 763 VNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKSSQALSLSNVAGVFYILVGGLG 822
Query: 733 FTAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + +++
Sbjct: 823 L-AMLVALVEF-CYKSRAEAKKL 843
Score = 95 (38.5 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 58/272 (21%), Positives = 103/272 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + A+ +N +VS + V+ FN
Sbjct: 136 ALLSLLDHYDWSRFVFLY-DTDRGYAVLQAIMEKAGQNGWQVS---AICVENFNDASYRR 191
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESFSK-- 158
LL + + +V+ + + I + Y ++ + + +LE F
Sbjct: 192 LLEDLDRRQEKKFVIDLEAERLQNILEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 251
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ + + K + RW+ + Q+ G S T L YD V
Sbjct: 252 ANVTGFQLVD-------FSKPMVIK--LMQRWNKLDQREYPGSESPPRYTSSL-TYDGVL 301
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A ++ G + R L Q GL+G
Sbjct: 302 VMAEAF-RNLRRQKIDISRRGNAGDCLANPAA-----PWNQGIDMERTLKQVRIQGLTGN 355
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
+QF+ V+ DV + ++GYW D
Sbjct: 356 IQFDHYGRRVNYTMDVFELKSNGPRKIGYWND 387
>UNIPROTKB|Q38PU0 [details] [associations]
symbol:GRIK5 "KA2" species:9541 "Macaca fascicularis"
[GO:0005622 "intracellular" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0043197
GO:GO:0035235 GO:GO:0005622 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159937
ProteinModelPortal:Q38PU0 Uniprot:Q38PU0
Length = 891
Score = 180 (68.4 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 60/237 (25%), Positives = 106/237 (44%)
Query: 362 VPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSY 416
V RR +F E + +G+C+D+L E +L+ + Y+ L DGL N S+
Sbjct: 428 VMRRPNFQALSGNE----RFEGFCVDMLRELAELLRFR--YRLRLVEDGLYGAPEPNGSW 481
Query: 417 DGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKP 475
G+V + N D AV I R K++DFS+P+++ G+ I+ ++ K + FL P
Sbjct: 482 TGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDP 541
Query: 476 FTVEMWCVTAASFVMIAVVIWILE-------HRVNDDFRGPPR---RQ--IATMFLFSFS 523
F+ +W +++ ++ V+++ + + R P Q + F
Sbjct: 542 FSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVG 601
Query: 524 TLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+ E +L R I SSYTA+L++ LTVQ++ V+ + L
Sbjct: 602 GFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDL 658
Score = 128 (50.1 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTVQ++ V+ + L + I Y GS ++ +S R
Sbjct: 631 IISSYTANLAAFLTVQRMEVPVESADDL-ADQTNIEYGTIHAGS-TMTFFQNSRYQTYQR 688
Query: 609 L---ISLGSPEDYERALRQG-PR--NGGVAAIVDEL--PYVQLFLSNQTDFGIIGQPFTR 660
+ + P + ++ +G R N A +++ Y + N T G G T+
Sbjct: 689 MWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIG--GLLDTK 746
Query: 661 SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS 720
G+G SP ++ AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 747 -GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAKGLGMENIG 805
Query: 721 FWGLYLLCGTI--TFTAFLVFL 740
+ L+CG I F A + F+
Sbjct: 806 GIFVVLICGLIIAVFVAVMEFI 827
Score = 67 (28.6 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 229 NITFSASHELPDSKATRVQ---LEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIV 285
++ SA EL S+ V+ ++ GT L+ L + GL+G+V+FN
Sbjct: 312 HVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRT 371
Query: 286 SRGYDVINIDKMEIHRVGYWF 306
+ ++ + +G W+
Sbjct: 372 NYTLRILEKSRQGHREIGVWY 392
>FB|FBgn0264000 [details] [associations]
symbol:GluRIB "Glutamate receptor IB" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0006812 "cation
transport" evidence=ISS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0030054
GO:GO:0045211 GO:GO:0006812 InterPro:IPR001828 OrthoDB:EOG4WM38M
GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 HSSP:P19491
FlyBase:FBgn0264000 EMBL:AJ251886 EMBL:AJ251887 SMR:Q9TVG7
STRING:Q9TVG7 InParanoid:Q9TVG7 Uniprot:Q9TVG7
Length = 1095
Score = 158 (60.7 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 60/259 (23%), Positives = 119/259 (45%)
Query: 251 LKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID-KMEIHRVGYWFDGS 309
+ ++ G + R L + GL+G ++FN D V+ V+ + + +V W D +
Sbjct: 417 VNAWEHGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDA 476
Query: 310 GFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFV 369
G L P L K V +L+ P + E R +++ I + + V
Sbjct: 477 G---LQP--LNAKYV-------RLR----PHVEFEKNRTYIVTTVLEEPYIMLKQ----V 516
Query: 370 GFVTEEHDSHKVQGYCIDIL-LEALKLVPYDVPYKFELFGDG-------LSNPSYDGLVK 421
F + H +++ +GYC D+ L A +L + Y+ L DG ++ +DG+V
Sbjct: 517 AFGEKLHGNNRFEGYCKDLADLLAKEL---GINYELRLVKDGNYGSEKSSAHGGWDGMVG 573
Query: 422 MVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVA--PINNHKASAWVFLKPFTVE 479
+ D A+ + I R +++DFS+P++S G+ I+ P+ + F+ P + E
Sbjct: 574 ELVRKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQ-TPGVFSFMNPLSQE 632
Query: 480 MWCVTAASFVMIAVVIWIL 498
+W S++ +++V++ +
Sbjct: 633 IWVSVIFSYIGVSIVLFFV 651
Score = 143 (55.4 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 53/234 (22%), Positives = 103/234 (44%)
Query: 518 FLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F FS + + + + S+ GR + SSYTA+L++ LTV+++ T +
Sbjct: 743 FWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSP 802
Query: 577 ESL-ITNDWPIGYQVGSFAYSYLSDS-LRIQKSRLISLGSPED-----YERALRQGPRNG 629
E L + + G + + + S + + + S + Y+ +++ +
Sbjct: 803 EDLAMQTEVQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDEGIKRVRNSK 862
Query: 630 GVAAIVDELPYVQLFLSNQT-DFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A++ E P + + + D +G+ G+G A S L ++ A+L L ENG
Sbjct: 863 GKYALLVESPKNEYVNAREPCDTMKVGRNLDTKGFGIATPLGSALKDPINLAVLTLKENG 922
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFL 740
L KL KW+ ++ C + + +L L + G+ Y+L G + + F+ L
Sbjct: 923 ELIKLRNKWWYEKAECSTHKDGETSHSELSLSNVAGIFYILIGGLLVSVFVAIL 976
Score = 78 (32.5 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 49/238 (20%), Positives = 98/238 (41%)
Query: 6 ANGLKVPLVSFAATDPTLSALQ-FPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDD 64
+N ++P V+ + L+ F F S + D Q A+ D I FYGW+++I +Y
Sbjct: 123 SNTFQMPFVTPWFPEKVLTPSSGFLDFALSMRPDYHQ--AIIDTIQFYGWRKIIYLYDSH 180
Query: 65 DYGRNGISALSNMLEK-NMAKVSYKLPLPVQFNQHDITV-LLNNSKPLG--PRVYVVHVS 120
D G+ L + + S+++ L + + + + L+ + +G ++V
Sbjct: 181 D----GLLRLQQIYQGLRPGNESFQVELVKRISNVSMAIEFLHTLEQIGRFENKHIVLDC 236
Query: 121 PDPGLR--IFTTAQKLQMMTNNYVWLATD------WLSATLESFSKMNQTSLRILQGVVG 172
P + + + L++ Y +L + W S +E F +N T RI+
Sbjct: 237 PTEMAKQILIQHVRDLRLGRRTYHYLLSGLVMDDRWESEIIE-FGAINITGFRIVD---- 291
Query: 173 LRQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYA---YDTVWAVARSIDKFINE 227
T + ++ F W + + V AG + A YD V+ + + +K + +
Sbjct: 292 ----TNRRLVRE-FYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLVEAFNKILRK 344
>MGI|MGI:95814 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007399
"nervous system development" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO;IC] [GO:0014054 "positive regulation of
gamma-aminobutyric acid secretion" evidence=IMP] [GO:0015277
"kainate selective glutamate receptor activity"
evidence=ISO;IGI;IDA;IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=IMP] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=ISO] [GO:0032230
"positive regulation of synaptic transmission, GABAergic"
evidence=ISO;IMP] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IPI] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IGI;IMP] [GO:0042391
"regulation of membrane potential" evidence=IDA;IMP] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=ISO;TAS] [GO:0048266 "behavioral
response to pain" evidence=IMP] [GO:0051899 "membrane
depolarization" evidence=IMP] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=ISO;IGI] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IGI;IMP] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95814 GO:GO:0051967
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:X66118
EMBL:U31444 IPI:IPI00122550 PIR:A41053 UniGene:Mm.5134
ProteinModelPortal:Q60934 SMR:Q60934 STRING:Q60934
PhosphoSite:Q60934 PRIDE:Q60934 UCSC:uc007zuw.2 CleanEx:MM_GRIK1
Genevestigator:Q60934 Uniprot:Q60934
Length = 836
Score = 168 (64.2 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 50/220 (22%), Positives = 102/220 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVP--YDVPYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAV 432
+ + + +GYC+D+L E ++ YDV + +G ++G+VK + + D AV
Sbjct: 455 YGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAV 514
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 515 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 574
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 575 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 634
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Score = 160 (61.4 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 73/335 (21%), Positives = 134/335 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDNRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 178 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 231
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 232 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 288
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 289 HV-SSIIEKWSMERLQAPPRPETGLLDGVMTTEAALMYDAVYMVA--------------I 333
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVI 292
ASH + +Q + K + G + + + + GL+G++ FN+ + D+I
Sbjct: 334 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDII 393
Query: 293 NIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
++ + ++G W SG ++ + N++ S
Sbjct: 394 SLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDS 428
>UNIPROTKB|Q16478 [details] [associations]
symbol:GRIK5 "Glutamate receptor ionotropic, kainate 5"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0043204 "perikaryon"
evidence=IEA] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=IEA] [GO:0051649 "establishment of localization
in cell" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0071333
"cellular response to glucose stimulus" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0071333 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0043204 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0035249 EMBL:CH471126
DrugBank:DB00142 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CleanEx:HS_GRIK2 EMBL:S40369 EMBL:AJ249209 IPI:IPI00103335
IPI:IPI00293288 PIR:I57936 RefSeq:NP_002079.3 UniGene:Hs.367799
ProteinModelPortal:Q16478 SMR:Q16478 IntAct:Q16478
MINT:MINT-1427286 STRING:Q16478 PhosphoSite:Q16478 DMDM:209572626
PRIDE:Q16478 DNASU:2901 Ensembl:ENST00000262895
Ensembl:ENST00000301218 GeneID:2901 KEGG:hsa:2901 UCSC:uc002osi.1
CTD:2901 GeneCards:GC19M042502 H-InvDB:HIX0022359
H-InvDB:HIX0027521 HGNC:HGNC:4583 MIM:600283 neXtProt:NX_Q16478
PharmGKB:PA28977 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP
BindingDB:Q16478 ChEMBL:CHEMBL2675 GenomeRNAi:2901 NextBio:11483
Bgee:Q16478 CleanEx:HS_GRIK5 Genevestigator:Q16478
GermOnline:ENSG00000105737 GO:GO:0031630 Uniprot:Q16478
Length = 980
Score = 180 (68.4 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 60/237 (25%), Positives = 106/237 (44%)
Query: 362 VPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSY 416
V RR +F E + +G+C+D+L E +L+ + Y+ L DGL N S+
Sbjct: 428 VMRRPNFQALSGNE----RFEGFCVDMLRELAELLRFR--YRLRLVEDGLYGAPEPNGSW 481
Query: 417 DGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKP 475
G+V + N D AV I R K++DFS+P+++ G+ I+ ++ K + FL P
Sbjct: 482 TGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDP 541
Query: 476 FTVEMWCVTAASFVMIAVVIWILE-------HRVNDDFRGPPR---RQ--IATMFLFSFS 523
F+ +W +++ ++ V+++ + + R P Q + F
Sbjct: 542 FSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVG 601
Query: 524 TLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+ E +L R I SSYTA+L++ LTVQ++ V+ + L
Sbjct: 602 GFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDL 658
Score = 129 (50.5 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTVQ++ V+ + L + I Y GS ++ +S R
Sbjct: 631 IISSYTANLAAFLTVQRMEVPVESADDL-ADQTNIEYGTIHAGS-TMTFFQNSRYQTYQR 688
Query: 609 L---ISLGSPEDYERALRQG-PR--NGGVAAIVDEL--PYVQLFLSNQTDFGIIGQPFTR 660
+ + P + ++ +G R N A +++ Y + N T G G T+
Sbjct: 689 MWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIG--GLLDTK 746
Query: 661 SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS 720
G+G SP ++ AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 747 -GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAKGLGMENIG 805
Query: 721 FWGLYLLCGTI--TFTAFLVFL 740
+ L+CG I F A + F+
Sbjct: 806 GIFIVLICGLIIAVFVAVMEFI 827
Score = 67 (28.6 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 229 NITFSASHELPDSKATRVQ---LEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIV 285
++ SA EL S+ V+ ++ GT L+ L + GL+G+V+FN
Sbjct: 312 HVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRT 371
Query: 286 SRGYDVINIDKMEIHRVGYWF 306
+ ++ + +G W+
Sbjct: 372 NYTLRILEKSRQGHREIGVWY 392
>UNIPROTKB|F1NZT2 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030534 "adult behavior" evidence=IEA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0035235
GO:GO:0042734 GO:GO:0032230 GO:GO:0051899 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AADN02010740
EMBL:AADN02010741 IPI:IPI00602891 ProteinModelPortal:F1NZT2
Ensembl:ENSGALT00000025530 Uniprot:F1NZT2
Length = 874
Score = 172 (65.6 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 51/222 (22%), Positives = 104/222 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS--YDGLVKMVANDVFDA 430
+ + + +GYC+D+L E ++ + Y+ +L DG N ++G+VK + + D
Sbjct: 424 YGNDRFEGYCLDLLKELSNILGFI--YEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADL 481
Query: 431 AVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AV + I R K++DFS+P+++ G+ ++ N + FL P + ++W + +
Sbjct: 482 AVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACL 541
Query: 490 MIAVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG 538
++ V++++ ++ P P + T+ F F L + E +L
Sbjct: 542 GVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALS 601
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 602 TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 643
Score = 156 (60.0 bits), Expect = 4.4e-20, Sum P(2) = 4.4e-20
Identities = 71/335 (21%), Positives = 132/335 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + PT+ ++I + A+ DL+ +Y WK V +Y
Sbjct: 88 VQSICNALEVPHIQTRWKHPTVDHKD-AFYINLYPDYAAISRAVLDLVLYYNWKIVTVVY 146
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 147 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDARPLLKEMKK-GKEFYVIFDC 200
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE + S +N T R+L +
Sbjct: 201 SHETAAEILKQILSMGMMTEYYHYFFTTLDLFALDLEPYRYSGVNMTGFRLLN----IEN 256
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
S+ +K + R + GL+ + T YD V+ VA
Sbjct: 257 PQVSSVIEKWSMERLQAPPKPETGLLDGMMTTEAALMYDAVYMVA--------------V 302
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVI 292
AS + +Q + K + G + + + + GL+G++ FN+ + D+I
Sbjct: 303 ASQRASQMTVSSLQCHRHKPWRFGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDII 362
Query: 293 NIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
++ + ++G W SG ++ + N++ S
Sbjct: 363 SLKEEGTEKIGVWNSYSGLNMTDSNKDRSTNITDS 397
Score = 122 (48.0 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 58/254 (22%), Positives = 96/254 (37%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 558 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 617
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 618 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 676
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 677 FMSSRQ--QTALVKNNDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 734
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
SP ++ AIL+L E G L + EKW+ GCPEE E L + + G+
Sbjct: 735 VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVENIGGI 792
Query: 725 YL-LCGTITFTAFL 737
++ L + + F+
Sbjct: 793 FIVLAAGLVLSVFV 806
>ZFIN|ZDB-GENE-030131-8013 [details] [associations]
symbol:gria4b "glutamate receptor, ionotropic,
AMPA 4b" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-8013 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
KO:K05200 EMBL:AF525748 IPI:IPI00509003 RefSeq:NP_997917.1
UniGene:Dr.81140 ProteinModelPortal:Q71E58 SMR:Q71E58 GeneID:336069
KEGG:dre:336069 CTD:336069 InParanoid:Q71E58 NextBio:20811163
Uniprot:Q71E58
Length = 904
Score = 142 (55.0 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 31/128 (24%), Positives = 67/128 (52%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + + YK + DG +P ++G+V + + A
Sbjct: 440 NEQYEGYCVDLASEIAKHIGFK--YKISIVPDGKYGARDPETKIWNGMVGELVYGKAEIA 497
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 498 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 557
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 558 VSVVLFLV 565
Score = 132 (51.5 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 65/264 (24%), Positives = 108/264 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 590 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 649
Query: 567 QQLSTSVKGIESLITN-DWPIG-YQVGSFAYSYLSDSLRIQKSRLISLGSPED--YERAL 622
+++ + ++ E L D G GS + + + + + S E + +
Sbjct: 650 ERMVSPIESAEDLAKQTDIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPTVFTKTT 709
Query: 623 RQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGM 677
+G G A +++ D +G G+G A + S L +
Sbjct: 710 AEGVARVRKSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSQLGSAV 769
Query: 678 STAILKLSENGMLQKLHEKWF-----CKEGCPEERRQHSEPHQLRLISFWGL-YLLCGTI 731
+ A+LKL+E G+L KL KW+ C G E+ + S+ L L + G+ Y+L G +
Sbjct: 770 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGGEKDKSSQA--LSLSNVAGVFYILVGGL 827
Query: 732 TFTAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 GL-AMLVALIEF-CYKSRNEAKRM 849
Score = 102 (41.0 bits), Expect = 5.0e-20, Sum P(3) = 5.0e-20
Identities = 68/294 (23%), Positives = 116/294 (39%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N +VS + V+ FN
Sbjct: 141 ALLSLLDHYDWNRFVFLY-DTDRGYSILQAIMEKAGQNGWQVS---AICVENFNDASYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQT 162
LL + + +V+ + + R+ +++ + +V ++ A L F +N
Sbjct: 197 LLEDLDRRQEKTFVIDLEAE---RLNNMLEQI-VSVGKHV-KGYHYIMANL-GFKDINLE 250
Query: 163 SLRILQG---VVGLRQHTPDSIPKKA-FLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
R + G V G Q S P + RW+ + Q+ G + T L YD V
Sbjct: 251 --RFMHGGANVTGF-QLVDFSNPMVIKLMQRWNKLDQREYPGSDAPPKYTSAL-TYDGVM 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + + S D A ++ G + R L Q GL+G
Sbjct: 307 VMAEAF-RNLRRQKVDISRRGIAGDCLANPAA-----PWNQGIDMERTLKQVRLQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF------SVLPPETLKGKN 323
VQF+ V+ DV + R+GYW D ++LP ET +N
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSNGPRRIGYWNDADKLVLTQDHALLPNETYGMEN 414
>MGI|MGI:95818 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5 (gamma
2)" species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0008066 "glutamate receptor
activity" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IGI] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0030425 "dendrite"
evidence=ISO] [GO:0031630 "regulation of synaptic vesicle fusion to
presynaptic membrane" evidence=IMP] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IGI] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043113 "receptor clustering" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=ISO] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IDA] [GO:0051649
"establishment of localization in cell" evidence=ISO] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95818 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0060079 GO:GO:0042734
GO:GO:0035249 InterPro:IPR001828 EMBL:CH466593 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2901 KO:K05205
OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630 EMBL:D10011
EMBL:AC125468 IPI:IPI00123538 PIR:JH0589 RefSeq:NP_032194.2
UniGene:Mm.2879 ProteinModelPortal:Q61626 IntAct:Q61626
STRING:Q61626 PhosphoSite:Q61626 PaxDb:Q61626 PRIDE:Q61626
Ensembl:ENSMUST00000003468 GeneID:14809 KEGG:mmu:14809
InParanoid:Q61626 ChiTaRS:GRIK5 NextBio:286991
Genevestigator:Q61626 GermOnline:ENSMUSG00000003378 Uniprot:Q61626
Length = 979
Score = 180 (68.4 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 60/237 (25%), Positives = 106/237 (44%)
Query: 362 VPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSY 416
V RR +F E + +G+C+D+L E +L+ + Y+ L DGL N S+
Sbjct: 428 VMRRPNFQALSGNE----RFEGFCVDMLRELAELLRFR--YRLRLVEDGLYGAPEPNGSW 481
Query: 417 DGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKP 475
G+V + N D AV I R K++DFS+P+++ G+ I+ ++ K + FL P
Sbjct: 482 TGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDP 541
Query: 476 FTVEMWCVTAASFVMIAVVIWILE-------HRVNDDFRGPPR---RQ--IATMFLFSFS 523
F+ +W +++ ++ V+++ + + R P Q + F
Sbjct: 542 FSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVG 601
Query: 524 TLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+ E +L R I SSYTA+L++ LTVQ++ V+ + L
Sbjct: 602 GFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDL 658
Score = 128 (50.1 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTVQ++ V+ + L + I Y GS ++ +S R
Sbjct: 631 IISSYTANLAAFLTVQRMEVPVESADDL-ADQTNIEYGTIHAGS-TMTFFQNSRYQTYQR 688
Query: 609 L---ISLGSPEDYERALRQG-PR--NGGVAAIVDEL--PYVQLFLSNQTDFGIIGQPFTR 660
+ + P + ++ +G R N A +++ Y + N T G G T+
Sbjct: 689 MWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIG--GLLDTK 746
Query: 661 SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS 720
G+G SP ++ AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 747 -GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAKGLGMENIG 805
Query: 721 FWGLYLLCGTI--TFTAFLVFL 740
+ L+CG I F A + F+
Sbjct: 806 GIFVVLICGLIIAVFVAVMEFI 827
Score = 67 (28.6 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 229 NITFSASHELPDSKATRVQ---LEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIV 285
++ SA EL S+ V+ ++ GT L+ L + GL+G+V+FN
Sbjct: 312 HVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRT 371
Query: 286 SRGYDVINIDKMEIHRVGYWF 306
+ ++ + +G W+
Sbjct: 372 NYTLRILEKSRQGHREIGVWY 392
>RGD|2735 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006621 "protein
retention in ER lumen" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=IDA] [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IDA] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0017124
"SH3 domain binding" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IPI]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISO] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=IEA;ISO] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
[GO:0051649 "establishment of localization in cell" evidence=IMP]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2735 GO:GO:0014069
GO:GO:0043525 GO:GO:0071333 GO:GO:0017124 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0035249 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 GO:GO:0032983 PDB:3QLU PDB:3QLV PDBsum:3QLU PDBsum:3QLV
CTD:2901 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630
EMBL:Z11581 EMBL:U08258 IPI:IPI00207006 PIR:JH0592 RefSeq:NP_113696.1
UniGene:Rn.74042 PDB:3OM0 PDB:3OM1 PDBsum:3OM0 PDBsum:3OM1
ProteinModelPortal:Q63273 SMR:Q63273 STRING:Q63273 PhosphoSite:Q63273
PRIDE:Q63273 Ensembl:ENSRNOT00000027578 GeneID:24407 KEGG:rno:24407
UCSC:RGD:2735 InParanoid:Q63273 BindingDB:Q63273 ChEMBL:CHEMBL4041
NextBio:603217 Genevestigator:Q63273 GermOnline:ENSRNOG00000020310
Uniprot:Q63273
Length = 979
Score = 180 (68.4 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 60/237 (25%), Positives = 106/237 (44%)
Query: 362 VPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSY 416
V RR +F E + +G+C+D+L E +L+ + Y+ L DGL N S+
Sbjct: 428 VMRRPNFQALSGNE----RFEGFCVDMLRELAELLRFR--YRLRLVEDGLYGAPEPNGSW 481
Query: 417 DGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKP 475
G+V + N D AV I R K++DFS+P+++ G+ I+ ++ K + FL P
Sbjct: 482 TGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDP 541
Query: 476 FTVEMWCVTAASFVMIAVVIWILE-------HRVNDDFRGPPR---RQ--IATMFLFSFS 523
F+ +W +++ ++ V+++ + + R P Q + F
Sbjct: 542 FSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVG 601
Query: 524 TLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+ E +L R I SSYTA+L++ LTVQ++ V+ + L
Sbjct: 602 GFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDL 658
Score = 128 (50.1 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTVQ++ V+ + L + I Y GS ++ +S R
Sbjct: 631 IISSYTANLAAFLTVQRMEVPVESADDL-ADQTNIEYGTIHAGS-TMTFFQNSRYQTYQR 688
Query: 609 L---ISLGSPEDYERALRQG-PR--NGGVAAIVDEL--PYVQLFLSNQTDFGIIGQPFTR 660
+ + P + ++ +G R N A +++ Y + N T G G T+
Sbjct: 689 MWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIG--GLLDTK 746
Query: 661 SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS 720
G+G SP ++ AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 747 -GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAKGLGMENIG 805
Query: 721 FWGLYLLCGTI--TFTAFLVFL 740
+ L+CG I F A + F+
Sbjct: 806 GIFVVLICGLIIAVFVAVMEFI 827
Score = 67 (28.6 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 229 NITFSASHELPDSKATRVQ---LEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIV 285
++ SA EL S+ V+ ++ GT L+ L + GL+G+V+FN
Sbjct: 312 HVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRT 371
Query: 286 SRGYDVINIDKMEIHRVGYWF 306
+ ++ + +G W+
Sbjct: 372 NYTLRILEKSRQGHREIGVWY 392
>UNIPROTKB|J9P242 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2901 KO:K05205 OMA:NINSVME EMBL:AAEX03000923
RefSeq:XP_541594.4 Ensembl:ENSCAFT00000043369 GeneID:484480
KEGG:cfa:484480 Uniprot:J9P242
Length = 980
Score = 180 (68.4 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 60/237 (25%), Positives = 106/237 (44%)
Query: 362 VPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSY 416
V RR +F E + +G+C+D+L E +L+ + Y+ L DGL N S+
Sbjct: 428 VMRRPNFQALSGNE----RFEGFCVDMLRELAELLRFR--YRLRLVEDGLYGAPEPNGSW 481
Query: 417 DGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKP 475
G+V + N D AV I R K++DFS+P+++ G+ I+ ++ K + FL P
Sbjct: 482 TGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDP 541
Query: 476 FTVEMWCVTAASFVMIAVVIWILE-------HRVNDDFRGPPR---RQ--IATMFLFSFS 523
F+ +W +++ ++ V+++ + + R P Q + F
Sbjct: 542 FSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVG 601
Query: 524 TLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+ E +L R I SSYTA+L++ LTVQ++ V+ + L
Sbjct: 602 GFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDL 658
Score = 128 (50.1 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTVQ++ V+ + L + I Y GS ++ +S R
Sbjct: 631 IISSYTANLAAFLTVQRMEVPVESADDL-ADQTNIEYGTIHAGS-TMTFFQNSRYQTYQR 688
Query: 609 L---ISLGSPEDYERALRQG-PR--NGGVAAIVDEL--PYVQLFLSNQTDFGIIGQPFTR 660
+ + P + ++ +G R N A +++ Y + N T G G T+
Sbjct: 689 MWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIG--GLLDTK 746
Query: 661 SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS 720
G+G SP ++ AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 747 -GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAKGLGMENIG 805
Query: 721 FWGLYLLCGTI--TFTAFLVFL 740
+ L+CG I F A + F+
Sbjct: 806 GIFVVLICGLIIAVFVAVMEFI 827
Score = 67 (28.6 bits), Expect = 5.3e-20, Sum P(3) = 5.3e-20
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 229 NITFSASHELPDSKATRVQ---LEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIV 285
++ SA EL S+ V+ ++ GT L+ L + GL+G+V+FN
Sbjct: 312 HVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRT 371
Query: 286 SRGYDVINIDKMEIHRVGYWF 306
+ ++ + +G W+
Sbjct: 372 NYTLRILEKSRQGHREIGVWY 392
>FB|FBgn0004619 [details] [associations]
symbol:GluRIA "Glutamate receptor IA" species:7227
"Drosophila melanogaster" [GO:0006812 "cation transport"
evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;NAS] InterPro:IPR001320 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094
EMBL:AE014296 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812
InterPro:IPR001828 EMBL:M97192 EMBL:BT003218 EMBL:BT050435
PIR:A46421 RefSeq:NP_476855.1 UniGene:Dm.6460
ProteinModelPortal:Q03445 SMR:Q03445 STRING:Q03445 PaxDb:Q03445
EnsemblMetazoa:FBtr0076982 GeneID:38742 KEGG:dme:Dmel_CG8442
CTD:38742 FlyBase:FBgn0004619 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 InParanoid:Q03445 KO:K05313
OMA:EWRIVRR OrthoDB:EOG4WM38M PhylomeDB:Q03445 GenomeRNAi:38742
NextBio:810146 Bgee:Q03445 GermOnline:CG8442 GO:GO:0008328
GO:GO:0004971 GO:GO:0005234 Uniprot:Q03445
Length = 991
Score = 162 (62.1 bits), Expect = 5.5e-20, Sum P(3) = 5.5e-20
Identities = 64/253 (25%), Positives = 113/253 (44%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP + F +S + + + T S+ GR + SSYTA+L++ LTV
Sbjct: 674 PPNEFTMLNSFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTV 733
Query: 567 QQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRIQKSRLISL----------GSPE 616
+++ +K E L T + Y G+ Y + R + L + S
Sbjct: 734 ERMVAPIKTPEDL-TMQTDVNY--GTLLYGSTWEFFRRSQIGLHNKMWEYMNANQHHSVH 790
Query: 617 DYERALRQGPRNGGVAAIVDELPYVQLFLSNQT-DFGIIGQPFTRSGWGFAFQRDSPLAV 675
Y+ +R+ ++ G A++ E P + + D +G+ G+G A SPL
Sbjct: 791 TYDEGIRRVRQSKGKYALLVESPKNEYVNARPPCDTMKVGRNIDTKGFGVATPIGSPLRK 850
Query: 676 GMSTAILKLSENGMLQKLHEKW-FCKEGCPEERRQHSEPHQLRLISFWGLY-LLCGTITF 733
++ A+L L ENG L ++ KW F K C ++ + S P++L L + G+Y +L G +
Sbjct: 851 RLNEAVLTLKENGELLRIRNKWWFDKTECNLDQ-ETSTPNELSLSNVAGIYYILIGGLLL 909
Query: 734 TAFLVFLLRMVCQ 746
A +V ++ C+
Sbjct: 910 -AVIVAIMEFFCR 921
Score = 149 (57.5 bits), Expect = 5.5e-20, Sum P(3) = 5.5e-20
Identities = 55/255 (21%), Positives = 114/255 (44%)
Query: 254 FDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID-KMEIHRVGYWFDGSGFS 312
++ G + R L + GLSG+++F++D ++ V+ + + +V W D +G
Sbjct: 394 WEQGEKISRVLRKVEIDGLSGEIRFDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAG-- 451
Query: 313 VLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFV 372
+LP L N + S ++ + G + ++++ + + + V
Sbjct: 452 LLP---LHSHNYASSS-----RSASASTGDYDRNHTYIVSSLLEEPYLSLKQYTYGESLV 503
Query: 373 TEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSN---PS-YDGLVKMVAN 425
+ + +GYC D L + L + Y+ L DG N P +DG+V +
Sbjct: 504 GND----RFEGYCKD-LADMLA-AQLGIKYEIRLVQDGNYGAENQYAPGGWDGMVGELIR 557
Query: 426 DVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVA--PINNHKASAWVFLKPFTVEMWCV 483
D A+ + I R +++DFS+P+++ G+ I+ P+ + FL P + E+W
Sbjct: 558 KEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVKQ-TPGVFSFLNPLSQEIWIS 616
Query: 484 TAASFVMIAVVIWIL 498
S+V ++ V++ +
Sbjct: 617 VILSYVGVSFVLYFV 631
Score = 65 (27.9 bits), Expect = 5.5e-20, Sum P(3) = 5.5e-20
Identities = 46/220 (20%), Positives = 89/220 (40%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEK-NMAKVSYKL 89
F S + D Q A+ D I +YGW+ +I +Y D G+ L + ++ ++++
Sbjct: 147 FAISMRPDYHQ--AIIDTIQYYGWQSIIYLYDSHD----GLLRLQQIYQELKPGNETFRV 200
Query: 90 PLPVQFNQHDITV-LLNNSKPLG---PRVYVVHVSPDPGLRIFTTAQ---KLQMMTNNYV 142
+ + + + L+ + LG + V+ + I KL T +Y+
Sbjct: 201 QMVKRIANVTMAIEFLHTLEDLGRFSKKRIVLDCPAEMAKEIIVQHVRDIKLGRRTYHYL 260
Query: 143 W--LATD--WLSATLESFSKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQKGL 198
L D W S +E F +N T RI+ + DS K+ S S Q G
Sbjct: 261 LSGLVMDNHWPSDVVE-FGAINITGFRIVDSNRRAVRDFHDS-RKRLEPSGQSQSQNAGG 318
Query: 199 VSA--GLNTYGLYAYDTVWAVARSIDKFINEHNITFSASH 236
++ ++ YD V+ + + ++ + + F ++H
Sbjct: 319 PNSLPAISAQAALMYDAVFVLVEAFNRILRKKPDQFRSNH 358
>UNIPROTKB|I3LT35 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:CU861922
EMBL:FP325290 Ensembl:ENSSSCT00000028121 Uniprot:I3LT35
Length = 896
Score = 169 (64.5 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 50/220 (22%), Positives = 101/220 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSNPS--YDGLVKMVANDVFDAAV 432
+ + + +GYC+D+L E ++ + K G G N ++G+VK + + D AV
Sbjct: 416 YGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAV 475
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 476 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 535
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 536 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 595
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 596 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 635
Score = 158 (60.7 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 73/335 (21%), Positives = 133/335 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 80 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 138
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 139 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 192
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 193 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 249
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI K + R + GL+ + T YD V+ VA
Sbjct: 250 HV-SSIIDKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 294
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVI 292
ASH + +Q + K + G + + + + GL+G++ FN+ + D+I
Sbjct: 295 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRITFNKTDGLRKDFDLDII 354
Query: 293 NIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
++ + ++G W SG ++ + N++ S
Sbjct: 355 SLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNITDS 389
Score = 126 (49.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 62/259 (23%), Positives = 101/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 550 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 609
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 610 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 668
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q++ L+ S E +R L A++ E ++ + IG
Sbjct: 669 FMSSRQQTALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 721
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE + E L +
Sbjct: 722 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DNKEASALGVE 779
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 780 NIGGIFIVLAAGLVLSVFV 798
>ZFIN|ZDB-GENE-020125-2 [details] [associations]
symbol:gria1b "glutamate receptor, ionotropic, AMPA
1b" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:BX890629 EMBL:CR749161 IPI:IPI00993241
ProteinModelPortal:F1QCH0 Ensembl:ENSDART00000129703 Bgee:F1QCH0
Uniprot:F1QCH0
Length = 930
Score = 162 (62.1 bits), Expect = 6.9e-20, Sum P(3) = 6.9e-20
Identities = 35/126 (27%), Positives = 66/126 (52%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+++ E K V Y Y+ EL GDG ++G+V + D AV
Sbjct: 433 KYEGYCVELAAEIAKHVGYS--YRLELVGDGKYGARDAETMMWNGMVGELVYGKADVAVA 490
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 491 PLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 550
Query: 493 VVIWIL 498
VV++++
Sbjct: 551 VVLFLV 556
Score = 125 (49.1 bits), Expect = 6.9e-20, Sum P(3) = 6.9e-20
Identities = 61/250 (24%), Positives = 102/250 (40%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 619 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 678
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGSPEDY-------ERALRQGPRN 628
L I Y GS + + + + + S E E +R
Sbjct: 679 L-AKQTEIAYGTLDGGSTKEFFRRSKIAVFEKMWSYMKSAEPTVFVKTTDEGVVRVRKSK 737
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 738 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNPVNLAVLKLNEQG 797
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 798 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALVEF-C 855
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 856 YKSRIESRRM 865
Score = 87 (35.7 bits), Expect = 6.9e-20, Sum P(3) = 6.9e-20
Identities = 56/271 (20%), Positives = 103/271 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L++ Y W + + +Y D G++ L +L+ A+ ++++ + F+
Sbjct: 131 ALIALVEHYKWNKFVYMYSSDS---EGLTVLQKILD-TAAEKTWQVT-SINFDTLTEAAF 185
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTN---NYVWLATD--WLSATLESFSK 158
L + L + + R+ + Q L + N NY ++ + +L L F K
Sbjct: 186 LKAIQDLDNKKEFKIILDCELERLNSILQTLSELCNDLKNYHYILANLGFLDLNLTEFRK 245
Query: 159 --MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQKGLVSAG--LNTYGLYAYDTV 214
N T +++ +T ++ + + W K L S L G YD V
Sbjct: 246 GGANVTGFQLMN-------YTNPTVSRT--IQDWLEFDSKDLKSPKRRLKYTGALTYDGV 296
Query: 215 WAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSG 274
+A + + + I S + A + G + R L Q F GL+G
Sbjct: 297 TVMATAFQN-LRKQRIDISRRGNAGECLANPPA-----PWGQGIDIQRALQQVQFEGLTG 350
Query: 275 QVQFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
VQFN + + V+ +VGYW
Sbjct: 351 HVQFNDKGHRTNFTVSVMEFGPSGPKKVGYW 381
>UNIPROTKB|E2RFB5 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03000923 Ensembl:ENSCAFT00000007929
Uniprot:E2RFB5
Length = 980
Score = 175 (66.7 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 59/238 (24%), Positives = 107/238 (44%)
Query: 362 VPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSY 416
V RR +F E + +G+C+D+L E +L+ + Y+ L DGL N S+
Sbjct: 427 VMRRPNFQALSGNE----RFEGFCVDMLRELAELLRFR--YRLRLVEDGLYGAPEPNGSW 480
Query: 417 DGLV-KMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLK 474
G+V +++ D AV I R K++DFS+P+++ G+ I+ ++ K + FL
Sbjct: 481 TGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLD 540
Query: 475 PFTVEMWCVTAASFVMIAVVIWILE-------HRVNDDFRGPPR---RQ--IATMFLFSF 522
PF+ +W +++ ++ V+++ + + R P Q + F
Sbjct: 541 PFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPV 600
Query: 523 STLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+ E +L R I SSYTA+L++ LTVQ++ V+ + L
Sbjct: 601 GGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDL 658
Score = 128 (50.1 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTVQ++ V+ + L + I Y GS ++ +S R
Sbjct: 631 IISSYTANLAAFLTVQRMEVPVESADDL-ADQTNIEYGTIHAGS-TMTFFQNSRYQTYQR 688
Query: 609 L---ISLGSPEDYERALRQG-PR--NGGVAAIVDEL--PYVQLFLSNQTDFGIIGQPFTR 660
+ + P + ++ +G R N A +++ Y + N T G G T+
Sbjct: 689 MWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIG--GLLDTK 746
Query: 661 SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS 720
G+G SP ++ AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 747 -GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAKGLGMENIG 805
Query: 721 FWGLYLLCGTI--TFTAFLVFL 740
+ L+CG I F A + F+
Sbjct: 806 GIFVVLICGLIIAVFVAVMEFI 827
Score = 67 (28.6 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 229 NITFSASHELPDSKATRVQ---LEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIV 285
++ SA EL S+ V+ ++ GT L+ L + GL+G+V+FN
Sbjct: 311 HVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRT 370
Query: 286 SRGYDVINIDKMEIHRVGYWF 306
+ ++ + +G W+
Sbjct: 371 NYTLRILEKSRQGHREIGVWY 391
>UNIPROTKB|F1S9S0 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0042734 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
GO:GO:0032983 OMA:NRAPERL EMBL:AEMK01179282 EMBL:CU638667
EMBL:CU972359 EMBL:FP236137 Ensembl:ENSSSCT00000016497
Uniprot:F1S9S0
Length = 932
Score = 195 (73.7 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 55/226 (24%), Positives = 115/226 (50%)
Query: 374 EEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLV-KMVANDV 427
E + + +G+C+D+L E +++ ++ YK L GDG+ +N ++ G+V +++A
Sbjct: 413 EMEGNDRYEGFCVDMLKELAEILRFN--YKIRLVGDGVYGVPEANGTWTGMVGELIARKA 470
Query: 428 FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAA 486
D AV + I R K++DFS+P+++ G+ I+ ++ + + FL PF+ +W
Sbjct: 471 -DLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLL 529
Query: 487 SFVMIAVVIWILEHRVNDDFRGP-PRRQ-----IATMFLFSFSTLFKTN----QEATVS- 535
+++ ++ V++++ ++ P P Q + + S F Q +T++
Sbjct: 530 AYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAP 589
Query: 536 -SLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+L R I SSYTA+L++ LTVQ++ ++ ++ L
Sbjct: 590 RALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDL 635
Score = 129 (50.5 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ ++ L + I Y G + ++ +S R+
Sbjct: 608 IISSYTANLAAFLTVQRMDVPIESVDDL-ADQTAIEYGTIHGGSSMTFFQNSRYQTYQRM 666
Query: 610 ISL---GSPEDYERALRQG-PR--NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+ P + ++ +G R N A ++ E + + + IG G+
Sbjct: 667 WNYMYSKQPSVFVKSTEEGIARVLNSNYAFLL-ESTMNEYYRQRNCNLTQIGGLLDTKGY 725
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G S AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 726 GIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIF 785
Query: 724 LYLLCGTIT--FTAFLVFL 740
+ L+CG I F A L FL
Sbjct: 786 VVLICGLIVAIFMAMLEFL 804
Score = 44 (20.5 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 29/151 (19%), Positives = 57/151 (37%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYF--IRSTQSDSQQMAAMADLIDFYGWKEVI 58
+IS + +VP F QF F + S++ A+A +++F+
Sbjct: 82 IISNICGEKEVP--HFKVAPEEFIKFQFQRFTTLNLHPSNTDISVAVAGILNFFNCTTAC 139
Query: 59 AIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH 118
I + N L +L + + L + + + D T LL + ++H
Sbjct: 140 LICAKAECLLN----LEKLLRQFLISKD-TLSVRMLDDTRDPTPLLKEIRDDKTATIIIH 194
Query: 119 VSPDPGLRIFTTAQKLQMMTNNYVWLATDWL 149
+ I A +L M++ Y ++ T+ L
Sbjct: 195 ANASMSHTILLKAAELGMVSAYYTYIFTNLL 225
>UNIPROTKB|F1M4B0 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
IPI:IPI00952320 ProteinModelPortal:F1M4B0
Ensembl:ENSRNOT00000067147 ArrayExpress:F1M4B0 Uniprot:F1M4B0
Length = 895
Score = 168 (64.2 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 50/220 (22%), Positives = 102/220 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVP--YDVPYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAV 432
+ + + +GYC+D+L E ++ YDV + +G ++G+VK + + D AV
Sbjct: 416 YGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAV 475
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 476 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 535
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 536 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 595
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 596 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 635
Score = 154 (59.3 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 74/334 (22%), Positives = 133/334 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ + ++I + A+ DL+ +Y WK V +Y
Sbjct: 80 VQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 138
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L + K+ + LP N+ D LL K YV+ S
Sbjct: 139 -EDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFYVIFDCS 193
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQH 176
+ I + MMT Y + T D + LE +S +N T R+L + H
Sbjct: 194 HETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NPH 250
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
SI +K + R + GL+ + T YD V+ VA A
Sbjct: 251 V-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IA 295
Query: 235 SHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVIN 293
SH + +Q + K + G + + + + GL+G++ FN+ + D+I+
Sbjct: 296 SHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLDIIS 355
Query: 294 IDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
+ + ++G W SG ++ + N++ S
Sbjct: 356 LKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDS 389
Score = 127 (49.8 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 63/259 (24%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 550 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 609
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 610 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 668
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q+S L+ S E +R L A++ E ++ + IG
Sbjct: 669 FMSSRQQSALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 721
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 722 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 779
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 780 NIGGIFIVLAAGLVLSVFV 798
>UNIPROTKB|K7GSB6 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00918 Pfam:PF01094 InterPro:IPR001828
GeneTree:ENSGT00590000083056 EMBL:AEMK01188348 EMBL:CU062538
EMBL:CU407189 EMBL:CU457396 EMBL:CU928568
Ensembl:ENSSSCT00000032833 Uniprot:K7GSB6
Length = 573
Score = 165 (63.1 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 76/338 (22%), Positives = 141/338 (41%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L VP + +S + +++ S A+ DL+ F+ WK V +Y
Sbjct: 69 VQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVY 127
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G+ L +++ A Y L L ++ + D LL K G +V+
Sbjct: 128 -DDS---TGLIRLQELIK---APSRYNLRLKIRQLPADTKDAKPLLKEMKR-GKEFHVIF 179
Query: 119 -VSPDPGLRIFTTAQKLQMMTN--NYVWLATDWLSATLESF--SKMNQTSLRILQGVVGL 173
S + I A + MMT +Y++ D + +E + S +N T RIL
Sbjct: 180 DCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVNMTGFRILN----- 234
Query: 174 RQHTP-DSIPKKAFLSRWSGMQQ--KGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNI 230
++T SI +K + R + GL+ + T YD V V+ + +F
Sbjct: 235 TENTQVSSIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVSVGVQQF------ 288
Query: 231 TFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGY 289
P + +Q + K + GT + + + ++ GL+G++ FN+ +
Sbjct: 289 --------PQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDL 340
Query: 290 DVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
DVI++ + + ++G W SG ++ + K N++ S
Sbjct: 341 DVISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDS 378
Score = 151 (58.2 bits), Expect = 2.5e-19, Sum P(2) = 2.5e-19
Identities = 32/130 (24%), Positives = 71/130 (54%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL------SNPSYDGLVKMVANDVFD 429
+ + + +GYCID+L E ++ + Y+ L DG +N ++G+V+ + + D
Sbjct: 405 YGNDRFEGYCIDLLRELSTILGFT--YEIRLVEDGKYGAQDDANGQWNGMVRELIDHKAD 462
Query: 430 AAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASF 488
AV +AI R K++DFS+P+++ G+ ++ N + FL P + ++W ++
Sbjct: 463 LAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAY 522
Query: 489 VMIAVVIWIL 498
+ ++ V++++
Sbjct: 523 LGVSCVLFVI 532
>UNIPROTKB|F1P0S5 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 OMA:MVQQFLQ EMBL:AADN02013607
EMBL:AADN02013608 IPI:IPI00883216 Ensembl:ENSGALT00000013865
ArrayExpress:F1P0S5 Uniprot:F1P0S5
Length = 804
Score = 156 (60.0 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 358 NERYEGYCVDLASEIAKHV--GIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 415
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 416 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 475
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 476 VSVVLFLV 483
Score = 137 (53.3 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 63/262 (24%), Positives = 107/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 509 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 568
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 569 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 627
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 628 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTP 687
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKLSE G+L KL KW+ +G C ++ + L L + G+ Y+L G +
Sbjct: 688 VNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGL 747
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 748 -AMMVALIEF-CYKSRAESKRM 767
Score = 73 (30.8 bits), Expect = 2.8e-19, Sum P(3) = 2.8e-19
Identities = 50/269 (18%), Positives = 106/269 (39%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ +Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 58 AILSLLTYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGSIKDVQEFRRII 116
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ D RI T +++ ++ + ++ A L F+ +
Sbjct: 117 EEMDRRQEKR-YLIDCEVD---RINTILEQVVILGKHS--RGYHYMLANL-GFTDI--VL 167
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLVSAG---LNTYGLYAYDTVWAV 217
R++ G V G + ++ + FL RW + ++ A L +D V +
Sbjct: 168 ERVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTSALTHDAVLVI 227
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 228 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 280
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
QF+ + DV + + GYW
Sbjct: 281 QFDTYGRRTNYTIDVYEMKASGSRKAGYW 309
>ZFIN|ZDB-GENE-081104-209 [details] [associations]
symbol:si:ch211-264f5.8 "si:ch211-264f5.8"
species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-081104-209 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:CU207217 EMBL:CABZ01071364 EMBL:CABZ01071365
EMBL:CABZ01071366 IPI:IPI00961248 Ensembl:ENSDART00000114472
Uniprot:F1R276
Length = 979
Score = 186 (70.5 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 56/221 (25%), Positives = 105/221 (47%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDAAV 432
S + +G+C+D+L E ++ + ++ +L DGL N S+ G+V + N D AV
Sbjct: 414 SDQYEGFCVDMLRELADILKFS--FRIKLVDDGLYGAPEPNGSWTGMVGELINRKADLAV 471
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAASFVMI 491
I + R K++DFS+P+++ G+ I+ ++ K + FL PF+ +W +++ +
Sbjct: 472 AGFTITSEREKVIDFSKPFMNLGISILYRVHIGRKPGYFSFLDPFSPAVWLFMLLAYLAV 531
Query: 492 AVVIWILEHRVNDDFRGP-P----RRQIA----TM---FLFSFSTLFKTNQEATVSSLG- 538
+ V+++ ++ P P RR + T+ F + E +L
Sbjct: 532 SCVLFLAARLSPYEWYNPFPCWRERRDLLENQYTLGNSLWFPIGGFMQQGSEIMPRALST 591
Query: 539 RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTVQ++ ++ E L
Sbjct: 592 RCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESAEDL 632
Score = 120 (47.3 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 54/202 (26%), Positives = 91/202 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLI--TNDWPIGYQVGSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ E L TN Q GS +++ + +
Sbjct: 605 IISSYTANLAAFLTVQRMEVPIESAEDLADQTNIQYGTIQGGSTMTFFMNSRYQTYQRMW 664
Query: 610 ISLGS--PEDYERALRQG-PR--NGGVAAIVDEL--PYVQLFLSNQTDFGIIGQPFTRSG 662
+ S P + ++ +G R N A +++ Y + N T G G T+ G
Sbjct: 665 NYMYSKQPSVFVKSTEEGIARVLNSKYAFLLESTMNEYHRRLNCNLTQIG--GLLDTK-G 721
Query: 663 WGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFW 722
+G SP ++ IL+L EN L+ L +W+ C +E H L + +
Sbjct: 722 YGIGMPLGSPFRDEITLGILQLQENNRLEILKRRWWEGGKCLKEE-DHRAKAGLGMDNIG 780
Query: 723 GLY--LLCGTI--TFTAFLVFL 740
G++ L+CG I F A + F+
Sbjct: 781 GIFVVLICGLIIAVFVAIMEFV 802
Score = 61 (26.5 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 253 VFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGS 309
++ GT L+ L + GL+G+V+FN + ++ K +G W+ +
Sbjct: 313 IWQHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRILEKFKGGHKEIGVWYSNN 369
>UNIPROTKB|F1LPK4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00948300
ProteinModelPortal:F1LPK4 Ensembl:ENSRNOT00000039491
ArrayExpress:F1LPK4 Uniprot:F1LPK4
Length = 920
Score = 174 (66.3 bits), Expect = 3.5e-19, Sum P(4) = 3.5e-19
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 438 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 495
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 496 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 555
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 556 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 615
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 616 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 659
Score = 121 (47.7 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 47/194 (24%), Positives = 80/194 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 599 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 658
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 659 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 717
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 718 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 777
Query: 689 MLQKLHEKWFCKEG 702
+L KL KW+ +G
Sbjct: 778 LLDKLKNKWWYDKG 791
Score = 96 (38.9 bits), Expect = 3.5e-19, Sum P(4) = 3.5e-19
Identities = 34/150 (22%), Positives = 62/150 (41%)
Query: 179 DSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K G +A + YD V + + + + + I S
Sbjct: 266 DSLVSK-FIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 323
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 324 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 378
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 379 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 408
Score = 86 (35.3 bits), Expect = 3.5e-19, Sum P(4) = 3.5e-19
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 670 DSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YL 726
DS V + A+LKLSE G+L KL KW+ +G C ++ + L L + G+ Y+
Sbjct: 799 DSKTPVNL--AVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYI 856
Query: 727 LCGTITFTAFLVFLLRMVCQYVRYKQQQM 755
L G + A LV L+ C R + ++M
Sbjct: 857 LVGGLGL-AMLVALIEF-CYKSRAEAKRM 883
Score = 53 (23.7 bits), Expect = 3.5e-19, Sum P(4) = 3.5e-19
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 134 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 170
>UNIPROTKB|F1N246 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00707470 Ensembl:ENSBTAT00000026819
OMA:ICALICL Uniprot:F1N246
Length = 869
Score = 171 (65.3 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 50/220 (22%), Positives = 101/220 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSNPS--YDGLVKMVANDVFDAAV 432
+ + + +GYC+D+L E ++ + K G G N ++G+VK + + D AV
Sbjct: 417 YGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAV 476
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 477 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 536
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 537 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 596
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 597 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 636
Score = 148 (57.2 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 72/336 (21%), Positives = 134/336 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 80 VQSICNALEVPHIQTRWKHPSVDNRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 138
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 139 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 192
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 193 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 249
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H +I +K + R + GL+ + T YD V+ VA
Sbjct: 250 HV-SAIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 294
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNF-TGLSGQVQFNQDRNIVSR-GYDV 291
ASH + +Q + K + G + + + + GL+G++ FN+ + D+
Sbjct: 295 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWWDGLTGRITFNKTDGLRKDFDLDI 354
Query: 292 INIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
I++ + ++G W SG ++ + N++ S
Sbjct: 355 ISLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNITDS 390
Score = 69 (29.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 55/271 (20%), Positives = 96/271 (35%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 551 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 610
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 611 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 669
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 670 FMSSRQ--QTALVKNSDEGIHRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 727
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
P ++ A++ L + L E W G P++ Q + P L + L
Sbjct: 728 VGTPIADPFMRKLTLAMINLQQEKSLHFNQEYWIRGHGRPKDSLQLA-PW-LGSFNIASL 785
Query: 725 YLLCGTITFTAFLVFLLRMVCQYVRYKQQQM 755
+L+ + VF+ M Q+ K+Q +
Sbjct: 786 FLIISQSLPNS--VFICYMYFQFHGRKKQSL 814
>UNIPROTKB|D4ACE2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00231401
ProteinModelPortal:D4ACE2 Ensembl:ENSRNOT00000002142
ArrayExpress:D4ACE2 Uniprot:D4ACE2
Length = 834
Score = 168 (64.2 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 50/220 (22%), Positives = 102/220 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVP--YDVPYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAV 432
+ + + +GYC+D+L E ++ YDV + +G ++G+VK + + D AV
Sbjct: 386 YGNDRFEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAV 445
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 446 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 505
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 506 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 565
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 566 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 605
Score = 150 (57.9 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 77/336 (22%), Positives = 135/336 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ + ++I + A+ DL+ +Y WK V +Y
Sbjct: 48 VQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 106
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L + K+ + LP N+ D LL K YV+ S
Sbjct: 107 -EDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFYVIFDCS 161
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQH 176
+ I + MMT Y + T D + LE +S +N T R+L + H
Sbjct: 162 HETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NPH 218
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
SI +K + R + GL+ + T YD V+ VA A
Sbjct: 219 V-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IA 263
Query: 235 SHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDV 291
SH + +Q + K + G F+ L K + + GL+G++ FN+ + D+
Sbjct: 264 SHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNKTDGLRKDFDLDI 323
Query: 292 INIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
I++ + ++G W SG ++ + N++ S
Sbjct: 324 ISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDS 359
Score = 127 (49.8 bits), Expect = 9.7e-15, Sum P(2) = 9.7e-15
Identities = 63/259 (24%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 520 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 579
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 580 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 638
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q+S L+ S E +R L A++ E ++ + IG
Sbjct: 639 FMSSRQQSALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 691
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 692 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 749
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 750 NIGGIFIVLAAGLVLSVFV 768
>FB|FBgn0051201 [details] [associations]
symbol:GluRIIE "Glutamate receptor IIE" species:7227
"Drosophila melanogaster" [GO:0015277 "kainate selective glutamate
receptor activity" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:1900073 "regulation of neuromuscular synaptic transmission"
evidence=IC] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IC]
[GO:0008328 "ionotropic glutamate receptor complex" evidence=IPI]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 EMBL:AE014297
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GeneTree:ENSGT00590000082809 KO:K05313 GO:GO:0005234 GO:GO:0004970
EMBL:BT056325 RefSeq:NP_001036733.1 UniGene:Dm.18739 SMR:Q0KI42
EnsemblMetazoa:FBtr0110837 GeneID:318623 KEGG:dme:Dmel_CG31201
UCSC:CG31201-RB CTD:318623 FlyBase:FBgn0051201 eggNOG:NOG304745
InParanoid:Q0KI42 OMA:GICATKE OrthoDB:EOG44XGXQ GenomeRNAi:318623
NextBio:845667 Uniprot:Q0KI42
Length = 897
Score = 152 (58.6 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 72/321 (22%), Positives = 140/321 (43%)
Query: 285 VSRGY--DVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGK 342
V +GY DVI + I +VG W + + P+ L +D L N K
Sbjct: 370 VRKGYHLDVIELQPSGIVKVGTWDEDRQYR---PQRLAPTTAQFDSVDNSLAN------K 420
Query: 343 TETPRGWVIADNARPLRIGVPRR--ASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDV 400
T ++I + VP + A V + + + +GY +D++ E + ++
Sbjct: 421 T-----FIIL-------LSVPNKPYAQLVETYKQLEGNSQYEGYGVDLIKELADKLGFN- 467
Query: 401 PYKFELFGD--GLSNPSYD---GLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTG 455
+ F G+ G N S + G+++ + D A+ D+ I + R + +DF+ P+++ G
Sbjct: 468 -FTFVNGGNDYGSYNKSTNESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLG 526
Query: 456 LVIVAPINNHKASA--WVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP-P-- 510
+ I+ + KA+ + F+ PF+ E+W SF+ +++ +IL ++ P P
Sbjct: 527 IAILY-LKPQKATPELFTFMDPFSEEVWWFLGFSFLGVSLSFFILGRLSPSEWDNPYPCI 585
Query: 511 --RRQIATMFLFS----FST--LFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLS 561
++ F F+T L + E +L R + SSYTA+L+
Sbjct: 586 EEPEELENQFTLGNSIWFTTGALLQQGSEIGPKALSTRTVASFWWFFTLIVVSSYTANLA 645
Query: 562 SILTVQQLSTSVKGIESLITN 582
+ LT+++ + + ++ L N
Sbjct: 646 AFLTIEKPQSLINSVDDLADN 666
Score = 129 (50.5 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 37/159 (23%), Positives = 76/159 (47%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSL-RIQKS 607
+ SSYTA+L++ LT+++ + + ++ L N + Y + GS +++ + R +K
Sbjct: 636 VVSSYTANLAAFLTIEKPQSLINSVDDLADNKDGVVYGAKKTGSTRNFFMTSAEERYKKM 695
Query: 608 RLISLGSP----EDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+P ED + + N A +++ ++ + + IG G+
Sbjct: 696 NKFMSENPQYLTEDNMEGVNRVKTNTHYAFLMESTS-IEYNTKRECNLKKIGDALDEKGY 754
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG 702
G A ++D P + A+L+L E G+L+K+ KW+ + G
Sbjct: 755 GIAMRKDWPHRGKFNNALLELQEQGVLEKMKNKWWNEVG 793
Score = 82 (33.9 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ LI + W I +Y +Y N ++ L+ ML K+ ++ L +Q N + VL
Sbjct: 148 ALYSLITEFNWTRFIFLYESAEY-LNILNELTTMLGKSGTVITV-LRYDMQLNGNYKQVL 205
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLA--TDWLSATLESF--SKM 159
K + R+ VV S + AQ++ ++ +Y ++ D+ S LE + S+
Sbjct: 206 RRVRKSVDNRIVVVG-SSETMPEFLNQAQQVGIINEDYKYIIGNLDFHSFDLEEYKYSEA 264
Query: 160 NQTSLRI 166
N T LR+
Sbjct: 265 NITGLRL 271
>ZFIN|ZDB-GENE-020125-1 [details] [associations]
symbol:gria1a "glutamate receptor, ionotropic, AMPA
1a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05197 EMBL:AF525741
IPI:IPI00512681 RefSeq:NP_991161.1 UniGene:Dr.88082
ProteinModelPortal:Q71E65 SMR:Q71E65 GeneID:798689 KEGG:dre:798689
CTD:798689 InParanoid:Q71E65 NextBio:20933517 Uniprot:Q71E65
Length = 914
Score = 145 (56.1 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 34/133 (25%), Positives = 67/133 (50%)
Query: 375 EH--DSHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVAND 426
EH + K +GYC+++ E K V Y Y ++ DG ++G+V +
Sbjct: 425 EHFTGNDKYEGYCVELAAEIAKHVGYH--YILKIVADGKYGARDAETMMWNGMVGELVYG 482
Query: 427 VFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTA 485
D AV + I R +++DFS+P++S G+ +++ K + FL P E+W
Sbjct: 483 KADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMCIV 542
Query: 486 ASFVMIAVVIWIL 498
+++ ++VV++++
Sbjct: 543 FAYIGVSVVLFLV 555
Score = 136 (52.9 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 62/250 (24%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 612 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 671
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRI-QKS-RLISLGSPEDY-----ERALRQGPRN 628
L I Y GS + + + +K + P + E +R
Sbjct: 672 L-AKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKSADPSVFVKTTDEGVMRVRKSK 730
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + SPL ++ A+LKL+E G
Sbjct: 731 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRNPVNLAVLKLNEQG 790
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 791 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALVEF-C 848
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 849 YKSRTESRRM 858
Score = 76 (31.8 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 23/82 (28%), Positives = 36/82 (43%)
Query: 257 GTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPP 316
G + R L Q GL+G +QFN+ + V+ + +VGYW + F V
Sbjct: 332 GIDIQRALQQVRIEGLTGHIQFNEKGRRTNYSISVMELRPTGPKKVGYWNEDEKF-VSTA 390
Query: 317 ETLKGKNVSHSQLDWKLQNITW 338
+ G N ++ LQN T+
Sbjct: 391 AYMPGSNETYG-----LQNRTY 407
Score = 49 (22.3 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLE 79
A+ +I+ Y W + + +Y D +G+S L +L+
Sbjct: 131 ALVGVIEHYRWSKFVYMYSSD----SGLSVLQKVLD 162
>ZFIN|ZDB-GENE-030616-53 [details] [associations]
symbol:gria3b "glutamate receptor, ionotrophic, AMPA
3b" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030616-53 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 HOVERGEN:HBG051839 KO:K05199 OMA:MVQQFLQ
OrthoDB:EOG4XKV68 EMBL:AL732632 EMBL:BX511226 EMBL:BX539334
EMBL:AF525746 IPI:IPI00510089 RefSeq:NP_938174.1 UniGene:Dr.14975
SMR:Q71E60 Ensembl:ENSDART00000043180 GeneID:368416 KEGG:dre:368416
CTD:368416 InParanoid:Q71E60 NextBio:20812912 Uniprot:Q71E60
Length = 883
Score = 151 (58.2 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAA 431
+ K +GYC+D+ E K V + Y+ + DG +P S++G+V + D A
Sbjct: 438 NEKYEGYCVDLASEIAKHV--GIKYRLSIVMDGKYGARDPETKSWNGMVGELVYGRADIA 495
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 496 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 555
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 556 VSVVLFLV 563
Score = 121 (47.7 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 58/250 (23%), Positives = 102/250 (40%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y GS + + + + + S P + + G
Sbjct: 660 L-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTPDGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 719 GKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQG 778
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A +V L+ C
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL-AMMVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + +++
Sbjct: 837 YKSRAEAKRL 846
Score = 87 (35.7 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 53/269 (19%), Positives = 106/269 (39%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ Y W + + +Y D D G + + A+ N +V+ + + Q ++
Sbjct: 138 AVLSLLSHYKWDKFVYLY-DTDRGFSILQAIMEAAVANNWQVTARSVGSITDPQEFRRII 196
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ D RI +++ + N ++ A L F+ ++
Sbjct: 197 EEMDRRQEKR-YLIDCEVD---RINVILEQVVTLGKNS--RGYHYIIANL-GFTNISLDK 249
Query: 164 LRILQG--VVGLRQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLY----AYDTVWAV 217
+ L G + G + P+++ + FL RW + ++ A NT Y +YD + +
Sbjct: 250 V-FLGGANISGFQIINPENLVVQQFLQRWDRLDEREFPEAK-NTPLKYTSALSYDAILVI 307
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 308 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 360
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
QF+ + DV + ++GYW
Sbjct: 361 QFDSFGRRTNYTIDVYEMKTGGPRKIGYW 389
Score = 41 (19.5 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 284 IVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETL 319
I + G+ I++DK+ + SGF ++ PE L
Sbjct: 237 IANLGFTNISLDKVFLGGANI----SGFQIINPENL 268
>UNIPROTKB|A9Z1Z8 [details] [associations]
symbol:GRIK3 "Glutamate receptor, ionotropic, kainate 3,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471059 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 HSSP:P19491 EMBL:AL355386 EMBL:AC117945
RefSeq:NP_000822.2 UniGene:Hs.128848 DNASU:2899 GeneID:2899
KEGG:hsa:2899 CTD:2899 HGNC:HGNC:4581 PharmGKB:PA28975 KO:K05203
GenomeRNAi:2899 NextBio:11475 EMBL:AL591883 EMBL:AJ249210
IPI:IPI00646850 SMR:A9Z1Z8 STRING:A9Z1Z8 Ensembl:ENST00000373093
UCSC:uc001cba.1 Uniprot:A9Z1Z8
Length = 872
Score = 175 (66.7 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 52/222 (23%), Positives = 104/222 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDA 430
+ + + +GYCID+L E ++ + Y+ L DG ++G+VK + + D
Sbjct: 457 YGNDRFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADL 514
Query: 431 AVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AV + I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++
Sbjct: 515 AVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYL 574
Query: 490 MIAVVIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG 538
++ V++++ + D P ++ T+ F F +L + E +L
Sbjct: 575 GVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALS 634
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 TRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 135 (52.6 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 74/336 (22%), Positives = 134/336 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ + W+ +Y
Sbjct: 121 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATVVY 179
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 180 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKR-GREFRIIF 231
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL
Sbjct: 232 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN----- 286
Query: 174 RQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
D+ A + +WS M++ L +A + GL D V ++ + +I
Sbjct: 287 ----VDNPHVSAIVEKWS-MER--LQAAPRSESGLL--DGVMMTDAAL--LYDAVHIVSV 335
Query: 234 ASHELPDSKATRVQLEQLKVFD-GGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDV 291
P +Q + K + GG F+ + + + GL+G++ FN+ + D+
Sbjct: 336 CYQRAPQMTVNSLQCHRHKAWRFGGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 394
Query: 292 INIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
I++ + + +VG W G ++ +G NV+ S
Sbjct: 395 ISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDS 430
Score = 128 (50.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 674 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTA 732
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL+L E L
Sbjct: 733 DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 792
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL 727
+ EKW+ GCPEE ++ E L + G++++
Sbjct: 793 HIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIV 827
>MGI|MGI:95810 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA3 (alpha 3)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030425
"dendrite" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043083
"synaptic cleft" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043198 "dendritic shaft" evidence=ISO] [GO:0043204
"perikaryon" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95810 GO:GO:0014069 GO:GO:0060992 GO:GO:0010226
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0043195 GO:GO:0032281 GO:GO:0043083
GO:GO:0001919 InterPro:IPR001828 EMBL:CH466570 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 CTD:2892 KO:K05199
OrthoDB:EOG4XKV68 EMBL:AB022342 EMBL:AB079072 EMBL:AF483494
EMBL:AF483495 EMBL:AK220530 EMBL:AL672290 EMBL:AL672232
EMBL:BC129855 IPI:IPI00131472 RefSeq:NP_058582.3 UniGene:Mm.327681
PDB:3LSW PDB:3LSX PDBsum:3LSW PDBsum:3LSX ProteinModelPortal:Q9Z2W9
SMR:Q9Z2W9 IntAct:Q9Z2W9 STRING:Q9Z2W9 PhosphoSite:Q9Z2W9
PaxDb:Q9Z2W9 PRIDE:Q9Z2W9 Ensembl:ENSMUST00000076349 GeneID:53623
KEGG:mmu:53623 UCSC:uc009tam.2 BindingDB:Q9Z2W9 ChEMBL:CHEMBL3624
EvolutionaryTrace:Q9Z2W9 NextBio:310361 Bgee:Q9Z2W9
CleanEx:MM_GRIA3 Genevestigator:Q9Z2W9
GermOnline:ENSMUSG00000001986 Uniprot:Q9Z2W9
Length = 888
Score = 156 (60.0 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 442 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 499
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 500 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 559
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 560 VSVVLFLV 567
Score = 137 (53.3 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 63/262 (24%), Positives = 107/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 653 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 711
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 712 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTP 771
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKLSE G+L KL KW+ +G C ++ + L L + G+ Y+L G +
Sbjct: 772 VNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGL 831
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 832 -AMMVALIEF-CYKSRAESKRM 851
Score = 64 (27.6 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 46/269 (17%), Positives = 107/269 (39%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ +Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 142 AILSLLGYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDIQEFRRII 200
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 201 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDI--VL 251
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 252 ERVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 311
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 312 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 364
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
QF+ + DV + + GYW
Sbjct: 365 QFDTYGRRTNYTIDVYEMKVSGSRKAGYW 393
>UNIPROTKB|G3V6Z5 [details] [associations]
symbol:Gria3 "Glutamate receptor, ionotropic, AMPA3 (Alpha
3), isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:MVQQFLQ UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V6Z5 Ensembl:ENSRNOT00000010367 Uniprot:G3V6Z5
Length = 888
Score = 156 (60.0 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 442 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 499
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 500 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 559
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 560 VSVVLFLV 567
Score = 137 (53.3 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 63/262 (24%), Positives = 107/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 653 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 711
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 712 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTP 771
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKLSE G+L KL KW+ +G C ++ + L L + G+ Y+L G +
Sbjct: 772 VNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGL 831
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 832 -AMMVALIEF-CYKSRAESKRM 851
Score = 64 (27.6 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 46/269 (17%), Positives = 107/269 (39%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ +Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 142 AILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 200
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 201 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 252
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 253 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 311
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 312 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 364
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
QF+ + DV + + GYW
Sbjct: 365 QFDTYGRRTNYTIDVYEMKVSGSRKAGYW 393
>UNIPROTKB|Q13003 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0007215 "glutamate receptor signaling
pathway" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0042391 "regulation of membrane potential"
evidence=ISS;IDA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISS;IDA] [GO:0030424 "axon" evidence=ISS]
[GO:0032839 "dendrite cytoplasm" evidence=ISS] [GO:0043195
"terminal bouton" evidence=ISS] [GO:0043204 "perikaryon"
evidence=ISS] [GO:0007216 "G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS;IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005887 EMBL:CH471059
GO:GO:0051967 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 DrugBank:DB00142 GO:GO:0042391
GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH EMBL:U16127 EMBL:U16128 EMBL:AL355386
EMBL:AC117945 EMBL:S69349 IPI:IPI00011397 PIR:I59604
RefSeq:NP_000822.2 UniGene:Hs.128848 ProteinModelPortal:Q13003
SMR:Q13003 STRING:Q13003 PhosphoSite:Q13003 DMDM:212276502
PaxDb:Q13003 PRIDE:Q13003 DNASU:2899 Ensembl:ENST00000373091
GeneID:2899 KEGG:hsa:2899 UCSC:uc001caz.2 CTD:2899
GeneCards:GC01M037261 H-InvDB:HIX0028621 HGNC:HGNC:4581
HPA:HPA014709 MIM:138243 neXtProt:NX_Q13003 PharmGKB:PA28975
InParanoid:Q13003 KO:K05203 OMA:EEQAFRF PhylomeDB:Q13003
BindingDB:Q13003 ChEMBL:CHEMBL3684 GenomeRNAi:2899 NextBio:11475
ArrayExpress:Q13003 Bgee:Q13003 CleanEx:HS_GRIK3
Genevestigator:Q13003 GermOnline:ENSG00000163873 GO:GO:0001640
Uniprot:Q13003
Length = 919
Score = 175 (66.7 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 52/222 (23%), Positives = 104/222 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDA 430
+ + + +GYCID+L E ++ + Y+ L DG ++G+VK + + D
Sbjct: 457 YGNDRFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADL 514
Query: 431 AVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AV + I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++
Sbjct: 515 AVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYL 574
Query: 490 MIAVVIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG 538
++ V++++ + D P ++ T+ F F +L + E +L
Sbjct: 575 GVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALS 634
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 TRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 135 (52.6 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 74/336 (22%), Positives = 134/336 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ + W+ +Y
Sbjct: 121 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATVVY 179
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 180 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKR-GREFRIIF 231
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL
Sbjct: 232 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN----- 286
Query: 174 RQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
D+ A + +WS M++ L +A + GL D V ++ + +I
Sbjct: 287 ----VDNPHVSAIVEKWS-MER--LQAAPRSESGLL--DGVMMTDAAL--LYDAVHIVSV 335
Query: 234 ASHELPDSKATRVQLEQLKVFD-GGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDV 291
P +Q + K + GG F+ + + + GL+G++ FN+ + D+
Sbjct: 336 CYQRAPQMTVNSLQCHRHKAWRFGGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 394
Query: 292 INIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
I++ + + +VG W G ++ +G NV+ S
Sbjct: 395 ISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDS 430
Score = 128 (50.1 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 674 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTA 732
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL+L E L
Sbjct: 733 DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 792
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL 727
+ EKW+ GCPEE ++ E L + G++++
Sbjct: 793 HIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIV 827
>UNIPROTKB|F1RGG3 [details] [associations]
symbol:LOC100737141 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:FP015926 EMBL:FP102936 Ensembl:ENSSSCT00000003376 OMA:THIRICQ
Uniprot:F1RGG3
Length = 558
Score = 175 (66.7 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 59/238 (24%), Positives = 107/238 (44%)
Query: 362 VPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSY 416
V RR +F E + +G+C+D+L E +L+ + Y+ L DGL N S+
Sbjct: 5 VMRRPNFQALSGNE----RFEGFCVDMLRELAELLRFR--YRLRLVEDGLYGAPEPNGSW 58
Query: 417 DGLV-KMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLK 474
G+V +++ D AV I R K++DFS+P+++ G+ I+ ++ K + FL
Sbjct: 59 TGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLD 118
Query: 475 PFTVEMWCVTAASFVMIAVVIWILE-------HRVNDDFRGPPR---RQ--IATMFLFSF 522
PF+ +W +++ ++ V+++ + + R P Q + F
Sbjct: 119 PFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPV 178
Query: 523 STLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+ E +L R I SSYTA+L++ LTVQ++ V+ + L
Sbjct: 179 GGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDL 236
Score = 128 (50.1 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTVQ++ V+ + L + I Y GS ++ +S R
Sbjct: 209 IISSYTANLAAFLTVQRMEVPVESADDL-ADQTNIEYGTIHAGS-TMTFFQNSRYQTYQR 266
Query: 609 L---ISLGSPEDYERALRQG-PR--NGGVAAIVDEL--PYVQLFLSNQTDFGIIGQPFTR 660
+ + P + ++ +G R N A +++ Y + N T G G T+
Sbjct: 267 MWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIG--GLLDTK 324
Query: 661 SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS 720
G+G SP ++ AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 325 -GYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRAKGLGMENIG 383
Query: 721 FWGLYLLCGTI--TFTAFLVFL 740
+ L+CG I F A + F+
Sbjct: 384 GIFVVLICGLIIAVFVAVMEFI 405
>UNIPROTKB|F1RU73 [details] [associations]
symbol:LOC100519996 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
OMA:MVQQFLQ EMBL:CU210872 EMBL:CU469331 EMBL:CU856192
Ensembl:ENSSSCT00000013819 Uniprot:F1RU73
Length = 854
Score = 156 (60.0 bits), Expect = 7.7e-18, Sum P(3) = 7.7e-18
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 408 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 465
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 466 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 525
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 526 VSVVLFLV 533
Score = 137 (53.3 bits), Expect = 7.7e-18, Sum P(3) = 7.7e-18
Identities = 63/262 (24%), Positives = 107/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 559 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 618
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 619 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 677
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 678 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTP 737
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKLSE G+L KL KW+ +G C ++ + L L + G+ Y+L G +
Sbjct: 738 VNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGL 797
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 798 -AMMVALIEF-CYKSRAESKRM 817
Score = 60 (26.2 bits), Expect = 7.7e-18, Sum P(3) = 7.7e-18
Identities = 48/289 (16%), Positives = 112/289 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 108 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 166
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 167 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 218
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 219 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 277
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 278 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 330
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
QF+ + DV + + GYW + F + + + S
Sbjct: 331 QFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEYERFVPFSDQQISNDSAS 379
>UNIPROTKB|E2RHU1 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2892
KO:K05199 OMA:MVQQFLQ EMBL:AAEX03026851 EMBL:AAEX03026852
RefSeq:XP_852016.1 ProteinModelPortal:E2RHU1
Ensembl:ENSCAFT00000029477 GeneID:492110 KEGG:cfa:492110
NextBio:20864762 Uniprot:E2RHU1
Length = 894
Score = 156 (60.0 bits), Expect = 9.1e-18, Sum P(3) = 9.1e-18
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 448 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 505
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 506 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 565
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 566 VSVVLFLV 573
Score = 137 (53.3 bits), Expect = 9.1e-18, Sum P(3) = 9.1e-18
Identities = 63/262 (24%), Positives = 107/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 659 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 717
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 718 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTP 777
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKLSE G+L KL KW+ +G C ++ + L L + G+ Y+L G +
Sbjct: 778 VNLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGL 837
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 838 -AMMVALIEF-CYKSRAESKRM 857
Score = 60 (26.2 bits), Expect = 9.1e-18, Sum P(3) = 9.1e-18
Identities = 48/289 (16%), Positives = 112/289 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 206
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 207 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 258
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 259 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 317
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 318 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 370
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
QF+ + DV + + GYW + F + + + S
Sbjct: 371 QFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEYERFVPFSDQQISNDSAS 419
>UNIPROTKB|Q38PU2 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9541 "Macaca fascicularis" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISS] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0007196 "adenylate cyclase-inhibiting G-protein
coupled glutamate receptor signaling pathway" evidence=ISS]
[GO:0007216 "G-protein coupled glutamate receptor signaling
pathway" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043197
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
HSSP:P22756 GO:GO:0001640 EMBL:DQ159935 ProteinModelPortal:Q38PU2
SMR:Q38PU2 Uniprot:Q38PU2
Length = 919
Score = 175 (66.7 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 52/222 (23%), Positives = 104/222 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDA 430
+ + + +GYCID+L E ++ + Y+ L DG ++G+VK + + D
Sbjct: 457 YGNDRFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADL 514
Query: 431 AVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AV + I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++
Sbjct: 515 AVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYL 574
Query: 490 MIAVVIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG 538
++ V++++ + D P ++ T+ F F +L + E +L
Sbjct: 575 GVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALS 634
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 TRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 131 (51.2 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 73/334 (21%), Positives = 134/334 (40%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ + W+ +Y
Sbjct: 121 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATVVY 179
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKL-PLPVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
DD G + L ++ + + K+ LPV + D LL K G ++
Sbjct: 180 -DDSTGLIRLQEL--IMAPSRYNIRLKIRQLPV--DSDDSRPLLKEMKR-GREFRIIFDC 233
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGLRQ 175
S +I A + MMT Y ++ T D + LE + S +N T RIL
Sbjct: 234 SHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN------- 286
Query: 176 HTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSAS 235
D+ A + +WS M++ L +A GL D V ++ + +I
Sbjct: 287 --VDNPHVSAIVEKWS-MER--LQAAPRAESGLL--DGVMMTDAAL--LYDAVHIVSVCY 337
Query: 236 HELPDSKATRVQLEQLKVFD-GGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVIN 293
P +Q + K + GG F+ + + + GL+G++ FN+ + D+I+
Sbjct: 338 QRAPQMTVNSLQCHRHKAWRFGGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIIS 396
Query: 294 IDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
+ + + +VG W G ++ +G NV+ S
Sbjct: 397 LKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDS 430
Score = 128 (50.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 674 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTA 732
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL+L E L
Sbjct: 733 DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 792
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL 727
+ EKW+ GCPEE ++ E L + G++++
Sbjct: 793 HIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIV 827
>UNIPROTKB|F1MCM2 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting
G-protein coupled glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:DAAA02009187 IPI:IPI00709026
Ensembl:ENSBTAT00000012214 Uniprot:F1MCM2
Length = 881
Score = 173 (66.0 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 51/218 (23%), Positives = 102/218 (46%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDAAVGD 434
+ +GYCID+L E ++ + Y+ L DG ++G++K + + D AV
Sbjct: 423 RFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAP 480
Query: 435 IAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
+ I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++ ++
Sbjct: 481 LTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSC 540
Query: 494 VIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-RXX 541
V++++ + D P ++ T+ F F +L + E +L R
Sbjct: 541 VLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRII 600
Query: 542 XXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 601 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 638
Score = 132 (51.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 74/336 (22%), Positives = 133/336 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ + W+ +Y
Sbjct: 83 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATVVY 141
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 142 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKEMKR-GREFRIIF 193
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL
Sbjct: 194 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN----- 248
Query: 174 RQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
D+ A + +WS M++ L +A GL D V ++ + +I
Sbjct: 249 ----VDNPHVSAIVEKWS-MER--LQAAPRAESGLL--DGVMMTDAAL--LYDAVHIVSV 297
Query: 234 ASHELPDSKATRVQLEQLKVFD-GGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDV 291
P +Q + K + GG F+ + + + GL+G++ FN+ + D+
Sbjct: 298 CYQRAPQMTVNSLQCHRHKAWRFGGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 356
Query: 292 INIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
I++ + + +VG W G ++ +G NV+ S
Sbjct: 357 ISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDS 392
Score = 126 (49.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 576 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 635
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 636 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 694
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL+L E L
Sbjct: 695 DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 754
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL 727
+ EKW+ GCPEE ++ E L + G++++
Sbjct: 755 HIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIV 789
>UNIPROTKB|F1SV43 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015277 "kainate selective glutamate receptor activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting G-protein
coupled glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GeneTree:ENSGT00590000083056 OMA:EEQAFRF GO:GO:0001640
EMBL:FP104549 Ensembl:ENSSSCT00000004036 Uniprot:F1SV43
Length = 881
Score = 173 (66.0 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 51/218 (23%), Positives = 102/218 (46%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDAAVGD 434
+ +GYCID+L E ++ + Y+ L DG ++G++K + + D AV
Sbjct: 423 RFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAP 480
Query: 435 IAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
+ I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++ ++
Sbjct: 481 LTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSC 540
Query: 494 VIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-RXX 541
V++++ + D P ++ T+ F F +L + E +L R
Sbjct: 541 VLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRII 600
Query: 542 XXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 601 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 638
Score = 132 (51.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 74/336 (22%), Positives = 133/336 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ + W+ +Y
Sbjct: 83 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATVVY 141
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 142 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKEMKR-GREFRIIF 193
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL
Sbjct: 194 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN----- 248
Query: 174 RQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
D+ A + +WS M++ L +A GL D V ++ + +I
Sbjct: 249 ----VDNPHVSAIVEKWS-MER--LQAAPRAESGLL--DGVMMTDAAL--LYDAVHIVSV 297
Query: 234 ASHELPDSKATRVQLEQLKVFD-GGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDV 291
P +Q + K + GG F+ + + + GL+G++ FN+ + D+
Sbjct: 298 CYQRAPQMTVNSLQCHRHKAWRFGGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 356
Query: 292 INIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
I++ + + +VG W G ++ +G NV+ S
Sbjct: 357 ISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDS 392
Score = 126 (49.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 576 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 635
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 636 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 694
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL+L E L
Sbjct: 695 DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 754
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL 727
+ EKW+ GCPEE ++ E L + G++++
Sbjct: 755 HIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIV 789
>UNIPROTKB|J9NUD0 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:EEQAFRF EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 Ensembl:ENSCAFT00000048003 Uniprot:J9NUD0
Length = 918
Score = 173 (66.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 51/218 (23%), Positives = 102/218 (46%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDAAVGD 434
+ +GYCID+L E ++ + Y+ L DG ++G++K + + D AV
Sbjct: 515 RFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAP 572
Query: 435 IAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
+ I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++ ++
Sbjct: 573 LTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSC 632
Query: 494 VIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-RXX 541
V++++ + D P ++ T+ F F +L + E +L R
Sbjct: 633 VLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRII 692
Query: 542 XXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 693 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 730
Score = 132 (51.5 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 74/336 (22%), Positives = 133/336 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ + W+ +Y
Sbjct: 175 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATVVY 233
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 234 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKEMKR-GREFRIIF 285
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL
Sbjct: 286 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN----- 340
Query: 174 RQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
D+ A + +WS M++ L +A GL D V ++ + +I
Sbjct: 341 ----VDNPHVSAIVEKWS-MER--LQAAPRAESGLL--DGVMMTDAAL--LYDAVHIVSV 389
Query: 234 ASHELPDSKATRVQLEQLKVFD-GGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDV 291
P +Q + K + GG F+ + + + GL+G++ FN+ + D+
Sbjct: 390 CYQRAPQMTVNSLQCHRHKAWRFGGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 448
Query: 292 INIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
I++ + + +VG W G ++ +G NV+ S
Sbjct: 449 ISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDS 484
Score = 68 (29.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 40/192 (20%), Positives = 68/192 (35%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 668 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 727
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 728 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 786
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL + G
Sbjct: 787 DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILSAAGGG-- 844
Query: 691 QKLHEKWFCKEG 702
Q H + EG
Sbjct: 845 QAAHHEGEVVEG 856
>UNIPROTKB|F1PWT6 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203 EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 RefSeq:XP_850331.3 Ensembl:ENSCAFT00000005371
GeneID:608269 KEGG:cfa:608269 Uniprot:F1PWT6
Length = 919
Score = 173 (66.0 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 51/218 (23%), Positives = 102/218 (46%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDAAVGD 434
+ +GYCID+L E ++ + Y+ L DG ++G++K + + D AV
Sbjct: 461 RFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAP 518
Query: 435 IAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
+ I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++ ++
Sbjct: 519 LTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSC 578
Query: 494 VIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-RXX 541
V++++ + D P ++ T+ F F +L + E +L R
Sbjct: 579 VLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRII 638
Query: 542 XXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 639 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 132 (51.5 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 74/336 (22%), Positives = 133/336 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ + W+ +Y
Sbjct: 121 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATVVY 179
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 180 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKEMKR-GREFRIIF 231
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL
Sbjct: 232 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN----- 286
Query: 174 RQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
D+ A + +WS M++ L +A GL D V ++ + +I
Sbjct: 287 ----VDNPHVSAIVEKWS-MER--LQAAPRAESGLL--DGVMMTDAAL--LYDAVHIVSV 335
Query: 234 ASHELPDSKATRVQLEQLKVFD-GGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDV 291
P +Q + K + GG F+ + + + GL+G++ FN+ + D+
Sbjct: 336 CYQRAPQMTVNSLQCHRHKAWRFGGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLDI 394
Query: 292 INIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
I++ + + +VG W G ++ +G NV+ S
Sbjct: 395 ISLKEDGLEKVGVWSPAEGLNITEVAKGRGPNVTDS 430
Score = 126 (49.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 674 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 732
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL+L E L
Sbjct: 733 DYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 792
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL 727
+ EKW+ GCPEE ++ E L + G++++
Sbjct: 793 HIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIV 827
>UNIPROTKB|F1P5Y1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0032590 "dendrite
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0032281 GO:GO:0031623 GO:GO:0032590
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:ARIMQQW EMBL:AADN02028659 EMBL:AADN02028660
IPI:IPI00820450 ProteinModelPortal:F1P5Y1
Ensembl:ENSGALT00000040661 Uniprot:F1P5Y1
Length = 904
Score = 182 (69.1 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 55/224 (24%), Positives = 105/224 (46%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAA 431
+ + +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D A
Sbjct: 434 NERYEGYCVELAAEIAKHVGYH--YRLEIVRDGKYGARDPDTKTWNGMVGELVYGRADVA 491
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 492 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 551
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H ++ R P F FS + + + S
Sbjct: 552 VSVVLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGAFMQQGCDISPRS 611
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 612 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 655
Score = 143 (55.4 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 62/250 (24%), Positives = 106/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 595 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 654
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 655 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 713
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 714 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQG 773
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 774 VLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 831
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 832 YKSRSESKRM 841
Score = 121 (47.7 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 77/344 (22%), Positives = 132/344 (38%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
M++ L V ++ + P ++ QF +R D A+ +I+ Y W++ + I
Sbjct: 96 MLTSFCGALHVCFIT--PSFPVETSNQFVLQLRPELQD-----ALISVIEHYSWQKFVYI 148
Query: 61 YVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHV 119
Y D D G + + L EKN + + + + VL + R+ VV
Sbjct: 149 Y-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRVLFQELQKKKERLVVVDC 204
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPD 179
+ I + KL+ N Y ++ + ++ +K ++ + G L +T D
Sbjct: 205 ESERLNIILSKIIKLEKNGNGYHYILANMGFMDID-LTKFRESGANVT-GFQ-LVNYT-D 260
Query: 180 SIPKKAFLSRWSGMQQKGLVSAGLN----TY-GLYAYDTVWAVARSIDKFINEHNITFSA 234
++P + + +W + L TY YD V +A + + I S
Sbjct: 261 TVPAR-IMQQWRNNDARELPRVDWKRPKATYTSALTYDGVRVMAEAFQN-LRRQRIDISR 318
Query: 235 SHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINI 294
D A + G + R L Q F GLSG VQFN+ + VI +
Sbjct: 319 RGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLSGNVQFNEKGRRTNYTLHVIEM 373
Query: 295 DKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITW 338
I ++GYW + + +T G N S S LQN T+
Sbjct: 374 KHDGIRKIGYWNEDEKLVPVAIDTQTG-NESTS-----LQNRTY 411
>RGD|70958 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA 3"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0010226 "response to
lithium ion" evidence=IEP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043083 "synaptic
cleft" evidence=IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043198 "dendritic
shaft" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060992 "response to
fungicide" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069
GO:GO:0060992 GO:GO:0010226 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
GO:GO:0032281 GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW
PDB:3LSX PDBsum:3LSW PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062
EMBL:M85036 IPI:IPI00195443 IPI:IPI00231095 PIR:C40170
RefSeq:NP_001106213.1 RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN
PDB:3DP4 PDB:3M3F PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8
PDB:4F1Y PDB:4F22 PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39
PDB:4F3B PDB:4F3G PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K
PDBsum:3O21 PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y
PDBsum:4F22 PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31
PDBsum:4F39 PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492
SMR:P19492 IntAct:P19492 MINT:MINT-86220 STRING:P19492
PhosphoSite:P19492 PRIDE:P19492 GeneID:29628 KEGG:rno:29628
UCSC:RGD:70958 BindingDB:P19492 ChEMBL:CHEMBL3504
EvolutionaryTrace:P19492 NextBio:609848 ArrayExpress:P19492
Genevestigator:P19492 GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 156 (60.0 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 442 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 499
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 500 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 559
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 560 VSVVLFLV 567
Score = 129 (50.5 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 62/262 (23%), Positives = 105/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 653 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 711
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 712 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNA 771
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 772 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 831
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 832 -AMMVALIEF-CYKSRAESKRM 851
Score = 65 (27.9 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 46/269 (17%), Positives = 107/269 (39%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ +Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 142 AILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 200
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 201 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 252
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 253 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 311
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 312 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 364
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
QF+ + DV + + GYW
Sbjct: 365 QFDTYGRRTNYTIDVYEMKVSGSRKAGYW 393
>UNIPROTKB|P19492 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0043195 GO:GO:0032281
GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW PDB:3LSX PDBsum:3LSW
PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062 EMBL:M85036
IPI:IPI00195443 IPI:IPI00231095 PIR:C40170 RefSeq:NP_001106213.1
RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN PDB:3DP4 PDB:3M3F
PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8 PDB:4F1Y PDB:4F22
PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39 PDB:4F3B PDB:4F3G
PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K PDBsum:3O21
PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y PDBsum:4F22
PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31 PDBsum:4F39
PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492 SMR:P19492
IntAct:P19492 MINT:MINT-86220 STRING:P19492 PhosphoSite:P19492
PRIDE:P19492 GeneID:29628 KEGG:rno:29628 UCSC:RGD:70958
BindingDB:P19492 ChEMBL:CHEMBL3504 EvolutionaryTrace:P19492
NextBio:609848 ArrayExpress:P19492 Genevestigator:P19492
GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 156 (60.0 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 442 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 499
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 500 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 559
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 560 VSVVLFLV 567
Score = 129 (50.5 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 62/262 (23%), Positives = 105/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 653 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 711
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 712 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNA 771
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 772 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 831
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 832 -AMMVALIEF-CYKSRAESKRM 851
Score = 65 (27.9 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 46/269 (17%), Positives = 107/269 (39%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ +Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 142 AILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 200
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 201 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 252
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 253 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 311
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 312 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 364
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
QF+ + DV + + GYW
Sbjct: 365 QFDTYGRRTNYTIDVYEMKVSGSRKAGYW 393
>MGI|MGI:95816 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10090 "Mus musculus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISO] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007196 "adenylate
cyclase-inhibiting G-protein coupled glutamate receptor signaling
pathway" evidence=ISO] [GO:0007215 "glutamate receptor signaling
pathway" evidence=ISO] [GO:0007216 "G-protein coupled glutamate
receptor signaling pathway" evidence=ISO] [GO:0008066 "glutamate
receptor activity" evidence=ISO] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051967 "negative
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95816 GO:GO:0005886
GO:GO:0005887 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 GO:GO:0042391 GO:GO:0032839
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203
OMA:EEQAFRF GO:GO:0001640 EMBL:AL607090 EMBL:AL627328 EMBL:BC118004
EMBL:AF245444 IPI:IPI00120318 IPI:IPI00986627 RefSeq:NP_001074566.1
UniGene:Mm.40896 ProteinModelPortal:B1AS29 SMR:B1AS29 STRING:B1AS29
PaxDb:B1AS29 PRIDE:B1AS29 DNASU:14807 Ensembl:ENSMUST00000030676
GeneID:14807 KEGG:mmu:14807 UCSC:uc008usa.2 InParanoid:B1AS29
ChiTaRS:GRIK3 NextBio:286987 Bgee:B1AS29 Genevestigator:B1AS29
Uniprot:B1AS29
Length = 919
Score = 175 (66.7 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 52/222 (23%), Positives = 104/222 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDA 430
+ + + +GYCID+L E ++ + Y+ L DG ++G+VK + + D
Sbjct: 457 YGNDRFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADL 514
Query: 431 AVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AV + I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++
Sbjct: 515 AVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYL 574
Query: 490 MIAVVIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG 538
++ V++++ + D P ++ T+ F F +L + E +L
Sbjct: 575 GVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALS 634
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 TRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 127 (49.8 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 74/338 (21%), Positives = 132/338 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ W+ +Y
Sbjct: 121 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQSLKWRSATVVY 179
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 180 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKR-GREFRIIF 231
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL V
Sbjct: 232 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN--VD- 288
Query: 174 RQHTPDSIPKKAFLSRWSGMQ--QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNIT 231
H +I +K + R + GL+ + T YD V V+ +
Sbjct: 289 NPHV-SAIVEKWAMERLQAAPRAESGLLDGVMMTDAALLYDAVHIVS-----------VC 336
Query: 232 FSASHELPDSKATRVQLEQLKVFD-GGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGY 289
+ + P +Q + K + GG F+ + + + GL+G++ FN+ +
Sbjct: 337 YQRA---PQMTVNSLQCHRHKAWRFGGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDL 392
Query: 290 DVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
D+I++ + + +VG W G ++ +G NV+ S
Sbjct: 393 DIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDS 430
Score = 127 (49.8 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 674 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 732
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL+L E L
Sbjct: 733 DYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 792
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL 727
+ EKW+ GCPEE ++ E L + G++++
Sbjct: 793 HIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIV 827
>UNIPROTKB|F1NW92 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02028659 EMBL:AADN02028660 IPI:IPI00585053
Ensembl:ENSGALT00000006493 Uniprot:F1NW92
Length = 902
Score = 182 (69.1 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 55/224 (24%), Positives = 105/224 (46%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAA 431
+ + +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D A
Sbjct: 432 NERYEGYCVELAAEIAKHVGYH--YRLEIVRDGKYGARDPDTKTWNGMVGELVYGRADVA 489
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 490 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 549
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H ++ R P F FS + + + S
Sbjct: 550 VSVVLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGAFMQQGCDISPRS 609
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 610 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 135 (52.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 61/250 (24%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 593 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 652
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 653 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 829
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 830 YKSRSESKRM 839
Score = 119 (46.9 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 69/299 (23%), Positives = 116/299 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +I+ Y W++ + IY D D G + + L EKN + + + + V
Sbjct: 132 ALISVIEHYSWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRV 187
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQT 162
L + R+ VV + I + KL+ N Y ++ + ++ +K ++
Sbjct: 188 LFQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANMGFMDID-LTKFRES 246
Query: 163 SLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQKGL--VSAGLNTY-GLYAYDTVWAVAR 219
+ G L +T D++P + + +W + L V Y YD V +A
Sbjct: 247 GANVT-GFQ-LVNYT-DTVPAR-IMQQWRNNDARELPRVDWKRPKYTSALTYDGVRVMAE 302
Query: 220 SIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFN 279
+ + I S D A + G + R L Q F GLSG VQFN
Sbjct: 303 AFQN-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLSGNVQFN 356
Query: 280 QDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITW 338
+ + VI + I ++GYW + + +T G N S S LQN T+
Sbjct: 357 EKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKLVPVAIDTQTG-NESTS-----LQNRTY 409
>UNIPROTKB|G3V8Y9 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V8Y9 Ensembl:ENSRNOT00000029031 Uniprot:G3V8Y9
Length = 888
Score = 156 (60.0 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 442 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 499
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 500 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 559
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 560 VSVVLFLV 567
Score = 128 (50.1 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 62/262 (23%), Positives = 105/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 653 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 711
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 712 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNA 771
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 772 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 831
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 832 -AMMVALIEF-CYKSRAESKRM 851
Score = 64 (27.6 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 46/269 (17%), Positives = 107/269 (39%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ +Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 142 AILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 200
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 201 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 252
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 253 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 311
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 312 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 364
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
QF+ + DV + + GYW
Sbjct: 365 QFDTYGRRTNYTIDVYEMKVSGSRKAGYW 393
>UNIPROTKB|E1BGZ0 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:MVQQFLQ EMBL:DAAA02067291 EMBL:DAAA02067292
EMBL:DAAA02067293 EMBL:DAAA02067294 IPI:IPI00692662
Ensembl:ENSBTAT00000015717 BindingDB:E1BGZ0 Uniprot:E1BGZ0
Length = 754
Score = 156 (60.0 bits), Expect = 3.9e-17, Sum P(3) = 3.9e-17
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 308 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 365
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 366 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 425
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 426 VSVVLFLV 433
Score = 128 (50.1 bits), Expect = 3.9e-17, Sum P(3) = 3.9e-17
Identities = 62/262 (23%), Positives = 105/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 459 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 518
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 519 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 577
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 578 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNA 637
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 638 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 697
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 698 -AMMVALIEF-CYKSRAESKRM 717
Score = 60 (26.2 bits), Expect = 3.9e-17, Sum P(3) = 3.9e-17
Identities = 48/289 (16%), Positives = 112/289 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 8 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 66
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 67 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 118
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 119 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 177
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 178 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 230
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
QF+ + DV + + GYW + F + + + S
Sbjct: 231 QFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEYERFVPFSDQQISNDSAS 279
>UNIPROTKB|F1P0L4 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001640
"adenylate cyclase inhibiting G-protein coupled glutamate receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:AADN02043882 EMBL:AADN02043883
IPI:IPI00577160 ProteinModelPortal:F1P0L4
Ensembl:ENSGALT00000003274 Uniprot:F1P0L4
Length = 891
Score = 168 (64.2 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 52/218 (23%), Positives = 100/218 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDAAVGD 434
+ +GYCID+L E ++ + Y+ L DG ++G++K + + D AV
Sbjct: 433 RFEGYCIDLLKELAVILGFT--YEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAP 490
Query: 435 IAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
+ I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++ ++
Sbjct: 491 LTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYILLAYLGVSC 550
Query: 494 VIWILE----HRVNDDFRGPPRRQIA----TMF---LFSFSTLFKTNQEATVSSLG-RXX 541
V++++ + D P I T+F F L + E +L R
Sbjct: 551 VLFVIARFSPYEWYDAHPCNPGSDIVENNFTLFNSFWFGMGALMQQGSELMPKALSTRII 610
Query: 542 XXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 611 GGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 648
Score = 132 (51.5 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 74/337 (21%), Positives = 132/337 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ + W+ +Y
Sbjct: 93 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQYLKWRSATVVY 151
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 152 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPLDTDDARPLLKEMKR-GREFRIIF 203
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL
Sbjct: 204 DCSHLMAAQILRQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVE--- 260
Query: 174 RQHTPDSIPKKAFLSRWSGMQQK-GLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITF 232
H I K A S + + GL+ + T YD V V+ + +
Sbjct: 261 NPHVSSIIEKWAMERLQSAPKAELGLLDGVMMTDAALLYDAVHVVS-----------VCY 309
Query: 233 SASHELPDSKATRVQLEQLKVFD-GGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYD 290
+ P +Q + K + GG F+ + + + GL+G++ FN+ + D
Sbjct: 310 QRA---PQMTVNSLQCHRHKAWRFGGRFM-NFIKEAQWEGLTGRIVFNKSSGLRTDFDLD 365
Query: 291 VINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
+I++ + + +VG W +G ++ +G NV+ S
Sbjct: 366 IISLKEDGLEKVGTWNPSNGLNITEISKGRGPNVTDS 402
Score = 129 (50.5 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 51/237 (21%), Positives = 94/237 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 586 FWFGMGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 645
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 646 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPTALVKNNEEGIQRTLTA 704
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + +G G+G SP ++ AIL+L E L
Sbjct: 705 DYALLMESTTIEYITQRNCNLTQVGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 764
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL--CGTI--TFTAFLVFLLRM 743
+ EKW+ GCPE+ ++ E L + + G++++ G + F A + F+ ++
Sbjct: 765 HVMKEKWWRGNGCPED--ENKEASALGIQNIGGIFIVLAAGLVLSVFVAMVEFIYKL 819
>WB|WBGene00003774 [details] [associations]
symbol:nmr-1 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043059 "regulation of forward locomotion"
evidence=IMP] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0045202 "synapse" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0043005 GO:GO:0045202
GO:GO:0007626 GO:GO:0030288 InterPro:IPR001828 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 EMBL:FO081043 GO:GO:0005234
GeneTree:ENSGT00700000104113 GO:GO:0004972 KO:K05208 OMA:WLEMLSH
HSSP:Q05586 GO:GO:0043059 EMBL:AF318613 PIR:T15967
RefSeq:NP_495033.2 UniGene:Cel.9184 ProteinModelPortal:G5EGQ9
SMR:G5EGQ9 EnsemblMetazoa:F07F6.6.1 EnsemblMetazoa:F07F6.6.2
GeneID:173929 KEGG:cel:CELE_F07F6.6 CTD:173929 WormBase:F07F6.6
NextBio:881705 Uniprot:G5EGQ9
Length = 1025
Score = 170 (64.9 bits), Expect = 4.2e-17, Sum P(4) = 4.2e-17
Identities = 49/198 (24%), Positives = 96/198 (48%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGI-ESLITN---DWPIGYQVGSFAYSYLSDSLRIQKS 607
+ +SYTA+L++ L + Q + G+ + + N ++ G + S Y Y ++ S
Sbjct: 664 MVASYTANLAAFLVLDQPEKGLTGVTDPRLRNPSANFSFGTVLNSNVYQYFKR--HVELS 721
Query: 608 RLISLGSPEDYERALR--QGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGF 665
+ P + RA NG + A + + ++ + + G F RS +G
Sbjct: 722 SMFRKMEPHNVRRASEAVHSLLNGSLDAFIWDSTRLEFEAARHCELRTRGSLFGRSAYGI 781
Query: 666 AFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG--CPEERRQHSEPHQLRLISFWG 723
Q++SP +++AIL++SE+G+++KL +KW + G C E H P +L L++
Sbjct: 782 GLQKNSPWTPHITSAILRMSESGVMEKLDQKWIDRGGPNCVVEA--HKSPARLGLVNMKD 839
Query: 724 LYLLCGT-ITFTAFLVFL 740
+++L + + FL F+
Sbjct: 840 IFILVSSGVALGIFLSFV 857
Score = 107 (42.7 bits), Expect = 4.2e-17, Sum P(4) = 4.2e-17
Identities = 22/84 (26%), Positives = 43/84 (51%)
Query: 418 GLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFT 477
G++ + D D A+G I I R +IVDF++P++ G+ I+ + FL+P
Sbjct: 506 GVIGELDGDTADMAIGGITINPERERIVDFTEPWLYHGIRILEKNIPRDSPMQSFLQPLQ 565
Query: 478 VEMWCVTAASFVMIAVVIWILEHR 501
+W S +++ + I+ L+ +
Sbjct: 566 SSLWTALFISVILVGLAIYCLDFK 589
Score = 72 (30.4 bits), Expect = 4.2e-17, Sum P(4) = 4.2e-17
Identities = 27/140 (19%), Positives = 58/140 (41%)
Query: 10 KVPLVSFAATDPTLSALQ-FPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGR 68
K+P+V D S +P F+R T S + ++ +++V+ + V D
Sbjct: 123 KLPVVGVMVRDAEFSKKNIYPTFVRPTAPLSDEAFVFLHMLLSLKYRQVVVLSVKRDI-- 180
Query: 69 NGISALSNMLEKNMA-KVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRI 127
N + ++ + K+ + + V+ N++ L + + + + V+ D +RI
Sbjct: 181 NADQFVEEFEKRRVEFKIIVQRYIEVELNENLNDTLAESFEEVTSNIIVLFAKKDDAVRI 240
Query: 128 FTTAQKLQMMTNNYVWLATD 147
F A L VW+ ++
Sbjct: 241 FANAGDLT--GKGKVWIVSE 258
Score = 42 (19.8 bits), Expect = 4.2e-17, Sum P(4) = 4.2e-17
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 273 SGQVQFNQDRNIVSRGYDVINIDKMEIHRVG 303
+ +V FN + YD+IN ME +VG
Sbjct: 337 TSRVHFNDKCERIGVEYDIINFH-MERKQVG 366
>UNIPROTKB|F6QCU7 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00711099 Ensembl:ENSBTAT00000026817
Uniprot:F6QCU7
Length = 797
Score = 171 (65.3 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 50/220 (22%), Positives = 101/220 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSNPS--YDGLVKMVANDVFDAAV 432
+ + + +GYC+D+L E ++ + K G G N ++G+VK + + D AV
Sbjct: 346 YGNDRFEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAV 405
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 406 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 465
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 466 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 525
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 526 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 565
Score = 127 (49.8 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 64/287 (22%), Positives = 114/287 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 48 VQSICNALEVPHIQTRWKHPSVDNRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 106
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 107 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 160
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 161 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 217
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H +I +K + R + GL+ + T YD V+ VA
Sbjct: 218 HV-SAIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 262
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQ 280
ASH + +Q + K + G + + + + GL+G++ FN+
Sbjct: 263 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRITFNK 309
Score = 59 (25.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 50/247 (20%), Positives = 87/247 (35%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 480 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 539
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 540 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 598
Query: 611 SLGSPEDYERALRQGPRNG-------GVAAIVDE--LPYVQLFLSNQTDFG-IIGQPFTR 660
+ S + + AL + G A +++ + YV N T G +I
Sbjct: 599 FMSSRQ--QTALVKNSDEGIHRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 656
Query: 661 SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS 720
G + S + + + ILK+ + L E W G P+ +Q + ++I
Sbjct: 657 VGTPIGKKEHSKIKIAI---ILKIQKEKSLHFNQEYWIRGHGRPKSHQQEASGLGTKIIR 713
Query: 721 FWGLYLL 727
G++ L
Sbjct: 714 --GVFFL 718
>ZFIN|ZDB-GENE-070912-354 [details] [associations]
symbol:grin3b "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3B" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 ZFIN:ZDB-GENE-070912-354 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 EMBL:CR392012 EMBL:CT954241
IPI:IPI00482751 Ensembl:ENSDART00000058111 Uniprot:E7F2N4
Length = 1118
Score = 243 (90.6 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 95/400 (23%), Positives = 175/400 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD-GL-SNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + + ++ G G + GLV + + V D AV +I +
Sbjct: 522 GYCIDLLEKLAEDMHFEFDLYIVGDGKYGAWKGGRWSGLVGDLLSGVADMAVTSFSINSA 581
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R++++DF+ P+ ST L I+ + A F+ P MW + + A+ I + E
Sbjct: 582 RSRVIDFTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFITLYEW 641
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLF-KTNQEATVSS-LGRXXXXXXXXXXXX 551
N F P R +F +S ++ LF +T T GR
Sbjct: 642 --NSPFGMTPHGRNRIRVFSYSSALNLCYAILFGRTVASKTPKCWTGRFLMNLWAIFCLL 699
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRIQKSRLIS 611
+ SSYTA+L++++ ++ V GI + + +G++ G+ S D ++KS
Sbjct: 700 VLSSYTANLAAVMVGEKTFEEVSGIHDVKLHHPSLGFRFGTVRESSAEDY--VKKS---- 753
Query: 612 LGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQT--DFGI----------IGQPFT 659
+Y R + GV+ + + P + F+ ++ D+ + +G+PF
Sbjct: 754 FPEMHEYMRRFNKPTTPDGVSTLKTDPPQLDAFIMDKALLDYEVSIDADCKLLTVGKPFA 813
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G ++SPL +S + + +G + LH+KW+ C + +E Q+ +
Sbjct: 814 IEGYGIGLPQNSPLTRNVSEYVSRYKSDGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIQ 873
Query: 720 SFWGLY-LLCGTITFTAFLVFL-----LRMVCQYVRYKQQ 753
F GL+ LLC + A L L R + ++R++Q+
Sbjct: 874 HFSGLFVLLCVGVA-GALLTLLGEHAFFRFILPHLRHQQR 912
Score = 56 (24.8 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 257 GTFLLRKLLQTNFTGLSGQVQFNQD--RNIVSRGYDVINIDK 296
G +L R L T+FTGL+G V+ + R + S+ + + ++ +
Sbjct: 359 GQYLARFLSNTSFTGLTGPVRVERSFSRVLTSQRFHIWSLQR 400
Score = 37 (18.1 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 256 GGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEI 299
G T +L +L Q GL G + +SR + I+ DK ME+
Sbjct: 192 GNTGMLEELQQRGHLGLDGAHWHLWETLNLSRLEENISEDKVMEL 236
>UNIPROTKB|Q38PU6 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839 HSSP:P19491
EMBL:DQ159931 ProteinModelPortal:Q38PU6 SMR:Q38PU6 PRIDE:Q38PU6
Uniprot:Q38PU6
Length = 894
Score = 157 (60.3 bits), Expect = 7.5e-17, Sum P(3) = 7.5e-17
Identities = 37/129 (28%), Positives = 70/129 (54%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 448 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 505
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMW-CVTAASFV 489
V + I R +++DFS+P++S G+ +++ K + FL P E+W C+ AS +
Sbjct: 506 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAS-I 564
Query: 490 MIAVVIWIL 498
++VV++++
Sbjct: 565 GVSVVLFLV 573
Score = 127 (49.8 bits), Expect = 7.5e-17, Sum P(3) = 7.5e-17
Identities = 62/262 (23%), Positives = 105/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 659 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 717
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 718 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNA 777
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEER-RQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 778 VNLAVLKLNEQGLLDKLKNKWWYDKGECGTGGCGSKDKTSALSLSNVAGVFYILVGGLGL 837
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 838 -AMMVALIEF-CYKSRAESKRM 857
Score = 60 (26.2 bits), Expect = 7.5e-17, Sum P(3) = 7.5e-17
Identities = 48/289 (16%), Positives = 112/289 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 206
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 207 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 258
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 259 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 317
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 318 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 370
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
QF+ + DV + + GYW + F + + + S
Sbjct: 371 QFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQISNDSAS 419
>UNIPROTKB|P42263 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
DrugBank:DB00142 GO:GO:0032281 GO:GO:0043083 GO:GO:0001919
Orphanet:777 EMBL:CH471107 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839
EMBL:U10302 EMBL:U10301 EMBL:X82068 EMBL:AF166365 EMBL:AF166362
EMBL:AF166363 EMBL:AF166364 EMBL:AF167332 EMBL:AF166366
EMBL:AF166367 EMBL:AF166368 EMBL:AF166369 EMBL:AF166370
EMBL:AF166371 EMBL:AF166372 EMBL:AF166373 EMBL:AF166375
EMBL:AF166374 EMBL:AL356213 EMBL:AL035426 EMBL:AL590139 EMBL:Z83848
EMBL:Z82899 IPI:IPI00219315 IPI:IPI00298700 PIR:S49460 PIR:S50128
PIR:S53696 RefSeq:NP_000819.3 RefSeq:NP_015564.4 UniGene:Hs.377070
ProteinModelPortal:P42263 SMR:P42263 DIP:DIP-46195N STRING:P42263
TCDB:1.A.10.1.4 PhosphoSite:P42263 DMDM:77416864 PaxDb:P42263
PRIDE:P42263 DNASU:2892 Ensembl:ENST00000264357
Ensembl:ENST00000371251 Ensembl:ENST00000371256 GeneID:2892
KEGG:hsa:2892 UCSC:uc004etq.4 UCSC:uc004etr.4 CTD:2892
GeneCards:GC0XP122318 HGNC:HGNC:4573 HPA:CAB007799 MIM:300699
MIM:305915 neXtProt:NX_P42263 PharmGKB:PA28968 InParanoid:P42263
KO:K05199 OMA:MVQQFLQ OrthoDB:EOG4XKV68 BindingDB:P42263
ChEMBL:CHEMBL3595 ChiTaRS:GRIA3 GenomeRNAi:2892 NextBio:11437
ArrayExpress:P42263 Bgee:P42263 CleanEx:HS_GRIA3
Genevestigator:P42263 GermOnline:ENSG00000125675 Uniprot:P42263
Length = 894
Score = 156 (60.0 bits), Expect = 7.6e-17, Sum P(3) = 7.6e-17
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 448 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 505
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 506 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 565
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 566 VSVVLFLV 573
Score = 128 (50.1 bits), Expect = 7.6e-17, Sum P(3) = 7.6e-17
Identities = 62/262 (23%), Positives = 105/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 659 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 717
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 718 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNA 777
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 778 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 837
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A +V L+ C R + ++M
Sbjct: 838 -AMMVALIEF-CYKSRAESKRM 857
Score = 60 (26.2 bits), Expect = 7.6e-17, Sum P(3) = 7.6e-17
Identities = 48/289 (16%), Positives = 112/289 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 206
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 207 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 258
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 259 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 317
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 318 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 370
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
QF+ + DV + + GYW + F + + + S
Sbjct: 371 QFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQISNDSAS 419
>RGD|71027 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IEA;ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005887
"integral to plasma membrane" evidence=IEA;ISO] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=ISO] [GO:0007215 "glutamate receptor
signaling pathway" evidence=ISO] [GO:0007216 "G-protein coupled
glutamate receptor signaling pathway" evidence=ISO] [GO:0007268
"synaptic transmission" evidence=NAS] [GO:0008066 "glutamate
receptor activity" evidence=IDA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA;ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0032839 "dendrite cytoplasm" evidence=IDA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2 UniGene:Rn.92477
PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94 PDB:4E0W PDB:4G8N
PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93 PDBsum:3U94
PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264 SMR:P42264
STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 175 (66.7 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 52/222 (23%), Positives = 104/222 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDA 430
+ + + +GYCID+L E ++ + Y+ L DG ++G+VK + + D
Sbjct: 457 YGNDRFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADL 514
Query: 431 AVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AV + I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++
Sbjct: 515 AVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYL 574
Query: 490 MIAVVIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG 538
++ V++++ + D P ++ T+ F F +L + E +L
Sbjct: 575 GVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALS 634
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 TRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 127 (49.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 674 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 732
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL+L E L
Sbjct: 733 DYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 792
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL 727
+ EKW+ GCPEE ++ E L + G++++
Sbjct: 793 HIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIV 827
Score = 122 (48.0 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 74/337 (21%), Positives = 130/337 (38%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ W+ +Y
Sbjct: 121 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQSLKWRSATVVY 179
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 180 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKR-GREFRIIF 231
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL V
Sbjct: 232 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN--VD- 288
Query: 174 RQHTPDSIPKKAFLSRWSGMQ--QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNIT 231
H +I +K + R + GL+ + T YD V V+ + ++ +
Sbjct: 289 NAHV-SAIVEKWSMERLQAAPRAESGLLDGVMMTDAALLYDAVHIVSVCYQR-ASQMTVN 346
Query: 232 FSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYD 290
H K R GG F+ + + + GL+G++ FN+ + D
Sbjct: 347 SLQCHR---HKPWRF---------GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLD 393
Query: 291 VINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
+I++ + + +VG W G ++ +G NV+ S
Sbjct: 394 IISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDS 430
>UNIPROTKB|P42264 [details] [associations]
symbol:Grik3 "Glutamate receptor ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2
UniGene:Rn.92477 PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94
PDB:4E0W PDB:4G8N PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93
PDBsum:3U94 PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264
SMR:P42264 STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 175 (66.7 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 52/222 (23%), Positives = 104/222 (46%)
Query: 376 HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVFDA 430
+ + + +GYCID+L E ++ + Y+ L DG ++G+VK + + D
Sbjct: 457 YGNDRFEGYCIDLLKELAHILGFS--YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADL 514
Query: 431 AVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AV + I R K +DFS+P+++ G+ ++ N S + FL P + ++W +++
Sbjct: 515 AVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYL 574
Query: 490 MIAVVIWILE----HRVNDDFRGPPRRQIA----TM---FLFSFSTLFKTNQEATVSSLG 538
++ V++++ + D P ++ T+ F F +L + E +L
Sbjct: 575 GVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALS 634
Query: 539 -RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I SSYTA+L++ LTV+++ + + + L
Sbjct: 635 TRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Score = 127 (49.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 49/217 (22%), Positives = 85/217 (39%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F +L + E +L R I SSYTA+L++ LTV+++ + +
Sbjct: 614 FWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 673
Query: 577 ESLITNDWPIGYQV----GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVA 632
+ L I Y + + S +K P + +G + A
Sbjct: 674 DDL-AKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRTLTA 732
Query: 633 --AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A++ E ++ + IG G+G SP ++ AIL+L E L
Sbjct: 733 DYALLMESTTIEYITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKL 792
Query: 691 QKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLL 727
+ EKW+ GCPEE ++ E L + G++++
Sbjct: 793 HIMKEKWWRGSGCPEE--ENKEASALGIQKIGGIFIV 827
Score = 122 (48.0 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 74/337 (21%), Positives = 130/337 (38%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + L +++ + A+ DL+ W+ +Y
Sbjct: 121 VQSICNALEVPHIQLRWKHHPLDNKD-TFYVNLYPDYASLSHAILDLVQSLKWRSATVVY 179
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ---FNQHDITVLLNNSKPLGPRVYVVH 118
DD G L + E MA Y + L ++ + D LL K G ++
Sbjct: 180 -DDSTG------LIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKR-GREFRIIF 231
Query: 119 -VSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVVGL 173
S +I A + MMT Y ++ T D + LE + S +N T RIL V
Sbjct: 232 DCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILN--VD- 288
Query: 174 RQHTPDSIPKKAFLSRWSGMQ--QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNIT 231
H +I +K + R + GL+ + T YD V V+ + ++ +
Sbjct: 289 NAHV-SAIVEKWSMERLQAAPRAESGLLDGVMMTDAALLYDAVHIVSVCYQR-ASQMTVN 346
Query: 232 FSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYD 290
H K R GG F+ + + + GL+G++ FN+ + D
Sbjct: 347 SLQCHR---HKPWRF---------GGRFM-NFIKEAQWEGLTGRIVFNKTSGLRTDFDLD 393
Query: 291 VINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
+I++ + + +VG W G ++ +G NV+ S
Sbjct: 394 IISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDS 430
>UNIPROTKB|J9NV46 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03016479
Ensembl:ENSCAFT00000048687 Uniprot:J9NV46
Length = 849
Score = 170 (64.9 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 80/373 (21%), Positives = 155/373 (41%)
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVIN 293
ASH + +Q + K + G + + + + GL+G++ FN+ + + +D+
Sbjct: 263 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGL-RKDFDLDI 321
Query: 294 IDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPG--GKTETP----R 347
I E +G+ E G+ H WK I W G T R
Sbjct: 322 ISLKE--------EGT-------EKAAGEVSKHLYKVWKKIGI-WNSNSGLNMTDGNKDR 365
Query: 348 GWVIADNA--RPLRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEALKLVPYDVPY 402
I D+ R L + +V + + + + + +GYC+D+L E ++ +
Sbjct: 366 SNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDV 425
Query: 403 KFELFGD-GLSNPS--YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VI 458
K G G N ++G+VK + + D AV + I R K++DFS+P+++ G+ ++
Sbjct: 426 KLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISIL 485
Query: 459 VAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP----PRRQI 514
N + FL P + ++W + + ++ V++++ ++ P P +
Sbjct: 486 YRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDV 545
Query: 515 A----TM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTV 566
T+ F F L + E +L R I SSYTA+L++ LTV
Sbjct: 546 VENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTV 605
Query: 567 QQLSTSVKGIESL 579
+++ + + + L
Sbjct: 606 ERMESPIDSADDL 618
Score = 126 (49.4 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 65/287 (22%), Positives = 113/287 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 48 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTLVY 106
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 107 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 160
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 161 SHGTAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 217
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 218 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 262
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQ 280
ASH + +Q + K + G + + + + GL+G++ FN+
Sbjct: 263 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNK 309
Score = 124 (48.7 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 62/259 (23%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 533 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 592
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 593 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 651
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q++ L+ S E +R L A++ E ++ + IG
Sbjct: 652 FMSSRQQTALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 704
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 705 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 762
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 763 NIGGIFIVLAAGLVLSVFV 781
>UNIPROTKB|F1NMB0 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=ISS] [GO:0007613 "memory" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0043408 "regulation of MAPK cascade"
evidence=ISS] [GO:0008021 "synaptic vesicle" evidence=ISS]
[GO:0014049 "positive regulation of glutamate secretion"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0045471 GO:GO:0007613
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0042734 GO:GO:0014049 GO:GO:0030288
GO:GO:0046982 InterPro:IPR001828 GO:GO:0017146 GO:GO:0043408
GO:GO:0005234 GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTNRSHL
EMBL:AADN02006024 EMBL:AADN02006025 EMBL:AADN02006026
EMBL:AADN02006027 IPI:IPI00599161 ProteinModelPortal:F1NMB0
Ensembl:ENSGALT00000019272 Uniprot:F1NMB0
Length = 1370
Score = 195 (73.7 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 102/416 (24%), Positives = 177/416 (42%)
Query: 197 GLVSAGLNT--YGLYAY--DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLK 252
GL+S + YGL A D + + + ++EH+ +P+ K++ ++ +
Sbjct: 138 GLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSF-------IPEPKSSCYNTQEKR 190
Query: 253 VFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDGS-- 309
++ L R L+ F G + + F++D + +I + K + RVG W +
Sbjct: 191 IYQSN-MLNRYLINVTFEGRN--LSFSEDGYQMHPKLVIILLTKERKWERVGKWKEKKLQ 247
Query: 310 -GFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RIGVP 363
+ V P L S + D L +T E P +VI +N PL R VP
Sbjct: 248 MKYYVWPRFELYPD--SEEREDDHLSIVTLE----EAP--FVIVENVDPLSGTCMRNTVP 299
Query: 364 RRASFV--GFVTEEHDSHK--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS----NPS 415
+ V EE D K +G+CIDIL + K V + Y L +G N +
Sbjct: 300 CQKRIVTENKTDEEPDYMKKCCKGFCIDILKKISKSVKFT--YDLYLVTNGKHGKKINGT 357
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
++G++ V AVG + I R+++VDFS P+I TG+ ++ +N S FL+P
Sbjct: 358 WNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEP 417
Query: 476 FTVEMWCVTAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSFSTL 525
F+ ++W + ++I AV +++ E+ R D R P P I + +
Sbjct: 418 FSADVWVMMFVMLLIISAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLV 477
Query: 526 FKT-----NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F N + T S + +SYTA+L++ + ++ V G+
Sbjct: 478 FNNSVPVQNPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 530
Score = 93 (37.8 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPH 714
G+ F +G+G A Q+DS + AIL+L +G +++L W C E+ +
Sbjct: 618 GKVFASTGYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS- 675
Query: 715 QLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYVRYKQ 752
QL + + G++ + G A + L+ +C+++ Y Q
Sbjct: 676 QLDIDNMAGVFYMLGA----AMALSLITFICEHLFYWQ 709
Score = 60 (26.2 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 24/138 (17%), Positives = 58/138 (42%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y Y ++ ++ + + +E + ++
Sbjct: 5 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIEHSFVGWELE 62
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT 146
L L + + D + + N K L V +++ + + IF A + + Y W+
Sbjct: 63 EVLLLDMSLDDGD-SKIQNQLKKLQSPVILLYCTKEEATYIFEVANSVGLTGYGYTWIVP 121
Query: 147 DWLSATLESFSKMNQTSL 164
++ ++ T L
Sbjct: 122 SLVAGDTDTVPSEFPTGL 139
>UNIPROTKB|F1P9T1 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AAEX03016479
Ensembl:ENSCAFT00000013975 Uniprot:F1P9T1
Length = 879
Score = 170 (64.9 bits), Expect = 9.9e-17, Sum P(2) = 9.9e-17
Identities = 80/373 (21%), Positives = 155/373 (41%)
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVIN 293
ASH + +Q + K + G + + + + GL+G++ FN+ + + +D+
Sbjct: 295 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGL-RKDFDLDI 353
Query: 294 IDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPG--GKTETP----R 347
I E +G+ E G+ H WK I W G T R
Sbjct: 354 ISLKE--------EGT-------EKAAGEVSKHLYKVWKKIGI-WNSNSGLNMTDGNKDR 397
Query: 348 GWVIADNA--RPLRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEALKLVPYDVPY 402
I D+ R L + +V + + + + + +GYC+D+L E ++ +
Sbjct: 398 SNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDV 457
Query: 403 KFELFGD-GLSNPS--YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VI 458
K G G N ++G+VK + + D AV + I R K++DFS+P+++ G+ ++
Sbjct: 458 KLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISIL 517
Query: 459 VAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP----PRRQI 514
N + FL P + ++W + + ++ V++++ ++ P P +
Sbjct: 518 YRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDV 577
Query: 515 A----TM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTV 566
T+ F F L + E +L R I SSYTA+L++ LTV
Sbjct: 578 VENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTV 637
Query: 567 QQLSTSVKGIESL 579
+++ + + + L
Sbjct: 638 ERMESPIDSADDL 650
Score = 126 (49.4 bits), Expect = 9.9e-17, Sum P(2) = 9.9e-17
Identities = 65/287 (22%), Positives = 113/287 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 80 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTLVY 138
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 139 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 192
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 193 SHGTAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 249
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 250 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 294
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQ 280
ASH + +Q + K + G + + + + GL+G++ FN+
Sbjct: 295 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNK 341
Score = 124 (48.7 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 62/259 (23%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 565 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 624
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 625 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 683
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q++ L+ S E +R L A++ E ++ + IG
Sbjct: 684 FMSSRQQTALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 736
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 737 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 794
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 795 NIGGIFIVLAAGLVLSVFV 813
>ZFIN|ZDB-GENE-020125-5 [details] [associations]
symbol:gria3a "glutamate receptor, ionotropic, AMPA
3a" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
HOVERGEN:HBG051839 KO:K05199 EMBL:AF525745 IPI:IPI00483360
RefSeq:NP_938153.1 UniGene:Dr.133590 ProteinModelPortal:Q71E61
SMR:Q71E61 GeneID:170452 KEGG:dre:170452 CTD:170452
InParanoid:Q71E61 NextBio:20797093 Uniprot:Q71E61
Length = 886
Score = 150 (57.9 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 33/126 (26%), Positives = 67/126 (53%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+D+ E K V + YK + DG +P +++G+V + D AV
Sbjct: 443 RYEGYCVDLASEIAKHV--GIKYKLSIVADGKYGARDPETKTWNGMVGELVYGRADIAVA 500
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 501 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 560
Query: 493 VVIWIL 498
VV++++
Sbjct: 561 VVLFLV 566
Score = 127 (49.8 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 62/249 (24%), Positives = 101/249 (40%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 603 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 662
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y GS + + + + + S P + + G
Sbjct: 663 L-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKSK 721
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L +S A+LKLSE G
Sbjct: 722 GKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPVSLAVLKLSEQG 781
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A V L+ C
Sbjct: 782 ILDKLKNKWWYDKGECGTKDSVSKDKTSALSLSNVAGVFYILVGGLGL-AMTVALVEF-C 839
Query: 746 QYVRYKQQQ 754
YK Q
Sbjct: 840 ----YKSHQ 844
Score = 64 (27.6 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 30/160 (18%), Positives = 60/160 (37%)
Query: 170 VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAVARSIDKFIN 226
+ G + PDS + FL R + ++ S+ L +D + +A + +++
Sbjct: 260 ITGFQIINPDSPIVQQFLQRRERLDEREFPESRSSPLKYTSALTHDAILVIAEAF-RYLR 318
Query: 227 EHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIV 285
+ S D A V Q G + R L G++G +QF+
Sbjct: 319 RQRVDISRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNIQFDSFGRRS 372
Query: 286 SRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
+ DV + ++GYW + F + + + ++ S
Sbjct: 373 NYTVDVYEMKPGGARKIGYWNEFEKFVYIVEQQVTNESSS 412
Score = 44 (20.5 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVS 86
A+ L+ Y W++ + +Y D D G + + A+ N +V+
Sbjct: 141 ALLSLLAHYKWEKFVYLY-DTDRGFSILQAIMESAVMNNWQVT 182
>UNIPROTKB|F1SQ84 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTNRSHL EMBL:CU463198
EMBL:CU694276 Ensembl:ENSSSCT00000000660 Uniprot:F1SQ84
Length = 1351
Score = 191 (72.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 103/419 (24%), Positives = 180/419 (42%)
Query: 197 GLVSAGLNT--YGLYAY--DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLK 252
GL+S + YGL A D + + + ++EH+ +P+ K++ + +
Sbjct: 143 GLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSF-------IPEPKSSCYNTHEKR 195
Query: 253 VFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDGS-- 309
++ L R L+ F G + + F++D + +I ++K + RVG W D S
Sbjct: 196 IYQSN-MLNRYLINVTFEGRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQ 252
Query: 310 -GFSVLP---PETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RI 360
+ V P PET Q D L +T E P +VI ++ PL R
Sbjct: 253 MKYYVWPRMCPET-------EEQEDDHLSIVTLE----EAP--FVIVESVDPLSGTCMRN 299
Query: 361 GVPRRASFVGF-VTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS---- 412
VP + V T+E + K +G+CIDIL + K V + Y L +G
Sbjct: 300 TVPCQKRIVSENKTDEEPGYIKKCCKGFCIDILKKISKSVKFT--YDLYLVTNGKHGKKI 357
Query: 413 NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVF 472
N +++G++ V AVG + I R+++VDFS P+I TG+ ++ +N S F
Sbjct: 358 NGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAF 417
Query: 473 LKPFTVEMWCVTAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSF 522
L+PF+ ++W + +++ AV +++ E+ R D R P P I +
Sbjct: 418 LEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLW 477
Query: 523 STLFKT-----NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
+F N + T S + +SYTA+L++ + ++ V G+
Sbjct: 478 GLVFNNSVPVQNPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 533
Score = 96 (38.9 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 42/209 (20%), Positives = 92/209 (44%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLSDSLRIQKSRLI 610
+SYTA+L++ + ++ V G+ ND+ ++ G+ ++R + +
Sbjct: 511 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMH 570
Query: 611 S-LG--SPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGW 663
+ +G + + AL + G + A + + + ++ G+ F +G+
Sbjct: 571 AYMGKFNQRGVDDALLS-LKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGY 629
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G A Q+DS + AIL+L +G +++L W C E+ + QL + + G
Sbjct: 630 GIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS-QLDIDNMAG 687
Query: 724 LYLLCGTITFTAFLVFLLRMVCQYVRYKQ 752
++ + G A + L+ +C+++ Y Q
Sbjct: 688 VFYMLGA----AMALSLITFICEHLFYWQ 712
Score = 60 (26.2 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y Y ++ ++ + + +E + ++
Sbjct: 10 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIENSFVGWELE 67
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT 146
L L + + D + + N K L + +++ + + IF A + + Y W+
Sbjct: 68 EVLLLDMSLDDGD-SKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVP 126
Query: 147 DWLSATLESFSKMNQTSL 164
++ ++ T L
Sbjct: 127 SLVAGDTDTVPSEFPTGL 144
>UNIPROTKB|F1M526 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951061
ProteinModelPortal:F1M526 Ensembl:ENSRNOT00000067570
ArrayExpress:F1M526 Uniprot:F1M526
Length = 832
Score = 170 (64.9 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 80/373 (21%), Positives = 156/373 (41%)
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVIN 293
ASH + +Q + K + G + + + + GL+G++ FN+ + + +D+
Sbjct: 295 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGL-RKDFDLDI 353
Query: 294 IDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPG--GKTETP----R 347
I E +G+ E G+ H WK I W G T R
Sbjct: 354 ISLKE--------EGT-------EKASGEVSKHLYKVWKKIGI-WNSNSGLNMTDGNRDR 397
Query: 348 GWVIADNA--RPLRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEALKLVP--YDV 400
I D+ R L + +V + + + + + +GYC+D+L E ++ YDV
Sbjct: 398 SNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFLYDV 457
Query: 401 PYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VI 458
+ +G ++G+VK + + D AV + I R K++DFS+P+++ G+ ++
Sbjct: 458 KLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISIL 517
Query: 459 VAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP----PRRQI 514
N + FL P + ++W + + ++ V++++ ++ P P +
Sbjct: 518 YRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDV 577
Query: 515 A----TM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTV 566
T+ F F L + E +L R I SSYTA+L++ LTV
Sbjct: 578 VENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTV 637
Query: 567 QQLSTSVKGIESL 579
+++ + + + L
Sbjct: 638 ERMESPIDSADDL 650
Score = 127 (49.8 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 63/259 (24%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 565 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 624
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 625 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 683
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q+S L+ S E +R L A++ E ++ + IG
Sbjct: 684 FMSSRQQSALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 736
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 737 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 794
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 795 NIGGIFIVLAAGLVLSVFV 813
Score = 124 (48.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 66/286 (23%), Positives = 113/286 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ + ++I + A+ DL+ +Y WK V +Y
Sbjct: 80 VQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 138
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L + K+ + LP N+ D LL K YV+ S
Sbjct: 139 -EDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFYVIFDCS 193
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQH 176
+ I + MMT Y + T D + LE +S +N T R+L + H
Sbjct: 194 HETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NPH 250
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
SI +K + R + GL+ + T YD V+ VA A
Sbjct: 251 V-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IA 295
Query: 235 SHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQ 280
SH + +Q + K + G + + + + GL+G++ FN+
Sbjct: 296 SHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNK 341
>UNIPROTKB|Q5R1P3 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008021
"synaptic vesicle" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007423 "sensory organ
development" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0048167
GO:GO:0014069 GO:GO:0007423 GO:GO:0045471 GO:GO:0046872
GO:GO:0007613 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
GO:GO:0007612 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966
GO:GO:0008270 GO:GO:0001701 GO:GO:0035235 GO:GO:0001967
GO:GO:0060079 GO:GO:0030288 GO:GO:0001662 InterPro:IPR001828
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0004972 HOVERGEN:HBG052635 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
EMBL:AB195992 RefSeq:NP_001008719.1 UniGene:Cfa.16222 HSSP:Q00959
ProteinModelPortal:Q5R1P3 SMR:Q5R1P3 STRING:Q5R1P3 PRIDE:Q5R1P3
Ensembl:ENSCAFT00000020886 GeneID:494009 KEGG:cfa:494009 CTD:2904
InParanoid:Q5R1P3 KO:K05210 OrthoDB:EOG4Z8XVM NextBio:20865538
Uniprot:Q5R1P3
Length = 1485
Score = 191 (72.3 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 103/419 (24%), Positives = 180/419 (42%)
Query: 197 GLVSAGLNT--YGLYAY--DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLK 252
GL+S + YGL A D + + + ++EH+ +P+ K++ + +
Sbjct: 276 GLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSF-------IPEPKSSCYNTHEKR 328
Query: 253 VFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDGS-- 309
++ L R L+ F G + + F++D + +I ++K + RVG W D S
Sbjct: 329 IYQSN-MLNRYLINVTFEGRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQ 385
Query: 310 -GFSVLP---PETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RI 360
+ V P PET Q D L +T E P +VI ++ PL R
Sbjct: 386 MKYYVWPRMCPET-------EEQEDDHLSIVTLE----EAP--FVIVESVDPLSGTCMRN 432
Query: 361 GVPRRASFVGF-VTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS---- 412
VP + V T+E + K +G+CIDIL + K V + Y L +G
Sbjct: 433 TVPCQKRIVSENKTDEEPGYIKKCCKGFCIDILKKISKSVKFT--YDLYLVTNGKHGKKI 490
Query: 413 NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVF 472
N +++G++ V AVG + I R+++VDFS P+I TG+ ++ +N S F
Sbjct: 491 NGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAF 550
Query: 473 LKPFTVEMWCVTAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSF 522
L+PF+ ++W + +++ AV +++ E+ R D R P P I +
Sbjct: 551 LEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLW 610
Query: 523 STLFKT-----NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
+F N + T S + +SYTA+L++ + ++ V G+
Sbjct: 611 GLVFNNSVPVQNPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 96 (38.9 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 42/209 (20%), Positives = 92/209 (44%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLSDSLRIQKSRLI 610
+SYTA+L++ + ++ V G+ ND+ ++ G+ ++R + +
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMH 703
Query: 611 S-LG--SPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGW 663
+ +G + + AL + G + A + + + ++ G+ F +G+
Sbjct: 704 AYMGKFNQRGVDDALLS-LKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGY 762
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G A Q+DS + AIL+L +G +++L W C E+ + QL + + G
Sbjct: 763 GIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS-QLDIDNMAG 820
Query: 724 LYLLCGTITFTAFLVFLLRMVCQYVRYKQ 752
++ + G A + L+ +C+++ Y Q
Sbjct: 821 VFYMLGA----AMALSLITFICEHLFYWQ 845
Score = 60 (26.2 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y Y ++ ++ + + +E + ++
Sbjct: 143 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIENSFVGWELE 200
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT 146
L L + + D + + N K L + +++ + + IF A + + Y W+
Sbjct: 201 EVLLLDMSLDDGD-SKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVP 259
Query: 147 DWLSATLESFSKMNQTSL 164
++ ++ T L
Sbjct: 260 SLVAGDTDTVPSEFPTGL 277
>UNIPROTKB|F1MCL3 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 CTD:2904 KO:K05210 OMA:CTNRSHL
EMBL:DAAA02014263 EMBL:DAAA02014253 EMBL:DAAA02014254
EMBL:DAAA02014255 EMBL:DAAA02014256 EMBL:DAAA02014257
EMBL:DAAA02014258 EMBL:DAAA02014259 EMBL:DAAA02014260
EMBL:DAAA02014261 EMBL:DAAA02014262 IPI:IPI00717585
RefSeq:NP_001179850.1 UniGene:Bt.61353 ProteinModelPortal:F1MCL3
Ensembl:ENSBTAT00000000263 GeneID:537804 KEGG:bta:537804
NextBio:20877218 Uniprot:F1MCL3
Length = 1497
Score = 191 (72.3 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 103/419 (24%), Positives = 180/419 (42%)
Query: 197 GLVSAGLNT--YGLYAY--DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLK 252
GLVS + YGL A D + + + ++EH+ +P+ K++ + +
Sbjct: 276 GLVSVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSF-------IPEPKSSCYNTHEKR 328
Query: 253 VFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDGS-- 309
++ L R L+ F G + + F++D + +I ++K + RVG W D S
Sbjct: 329 IYQSN-MLNRYLINVTFEGRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQ 385
Query: 310 -GFSVLP---PETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RI 360
+ V P PET Q D L +T E P +VI ++ PL R
Sbjct: 386 MKYYVWPRMCPET-------EEQEDDHLSIVTLE----EAP--FVIVESVDPLSGTCMRN 432
Query: 361 GVPRRASFVGF-VTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS---- 412
VP + + T+E + K +G+CIDIL + K V + Y L +G
Sbjct: 433 TVPCQKRIISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFT--YDLYLVTNGKHGKKI 490
Query: 413 NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVF 472
N +++G++ V AVG + I R+++VDFS P+I TG+ ++ +N S F
Sbjct: 491 NGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAF 550
Query: 473 LKPFTVEMWCVTAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSF 522
L+PF+ ++W + +++ AV +++ E+ R D R P P I +
Sbjct: 551 LEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLW 610
Query: 523 STLFKT-----NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
+F N + T S + +SYTA+L++ + ++ V G+
Sbjct: 611 GLVFNNSVPVQNPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 96 (38.9 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 42/209 (20%), Positives = 92/209 (44%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLSDSLRIQKSRLI 610
+SYTA+L++ + ++ V G+ ND+ ++ G+ ++R + +
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMH 703
Query: 611 S-LG--SPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGW 663
+ +G + + AL + G + A + + + ++ G+ F +G+
Sbjct: 704 AYMGKFNQRGVDDALLS-LKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGY 762
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G A Q+DS + AIL+L +G +++L W C E+ + QL + + G
Sbjct: 763 GIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS-QLDIDNMAG 820
Query: 724 LYLLCGTITFTAFLVFLLRMVCQYVRYKQ 752
++ + G A + L+ +C+++ Y Q
Sbjct: 821 VFYMLGA----AMALSLITFICEHLFYWQ 845
Score = 60 (26.2 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y Y ++ ++ + + +E + ++
Sbjct: 143 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIENSFVGWELE 200
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT 146
L L + + D + + N K L + +++ + + IF A + + Y W+
Sbjct: 201 EVLLLDMSLDDGD-SKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVP 259
Query: 147 DWLSATLESFSKMNQTSL 164
++ ++ T L
Sbjct: 260 SLVAGDTDTVPSEFPTGL 277
>MGI|MGI:95821 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, NMDA2B (epsilon
2)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001964 "startle response" evidence=IGI;IMP]
[GO:0001967 "suckling behavior" evidence=IMP] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IGI;IMP] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005149 "interleukin-1
receptor binding" evidence=ISO] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity" evidence=IGI]
[GO:0005262 "calcium channel activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IGI] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007423
"sensory organ development" evidence=IMP] [GO:0007611 "learning or
memory" evidence=TAS] [GO:0007612 "learning" evidence=IMP;IDA]
[GO:0007613 "memory" evidence=ISO;IMP;IDA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008021 "synaptic vesicle"
evidence=IDA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008306 "associative learning"
evidence=ISO] [GO:0009790 "embryo development" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014049 "positive
regulation of glutamate secretion" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO;IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030018 "Z disc" evidence=ISO] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0031749 "D2 dopamine receptor
binding" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IMP] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IMP] [GO:0035255 "ionotropic
glutamate receptor binding" evidence=ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0042596 "fear
response" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043083 "synaptic cleft" evidence=ISO] [GO:0043113 "receptor
clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043408 "regulation of MAPK cascade" evidence=ISO] [GO:0045202
"synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0045471 "response to ethanol" evidence=ISO;IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048167 "regulation
of synaptic plasticity" evidence=IMP] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=TAS] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=ISO]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050806 "positive regulation
of synaptic transmission" evidence=ISO] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IGI;IMP] [GO:0070588
"calcium ion transmembrane transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95821
GO:GO:0014069 GO:GO:0009986 GO:GO:0007423 GO:GO:0045471
GO:GO:0046872 GO:GO:0007613 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0007612 GO:GO:0008021 GO:GO:0048266
GO:GO:0050966 GO:GO:0008270 GO:GO:0001701 GO:GO:0001967
GO:GO:0060079 GO:GO:0042734 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0048168 GO:GO:0001964 GO:GO:0017146
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 CTD:2904
KO:K05210 OrthoDB:EOG4Z8XVM EMBL:D10651 EMBL:AK002963
IPI:IPI00321320 PIR:I49704 RefSeq:NP_032197.3 UniGene:Mm.436649
ProteinModelPortal:Q01097 SMR:Q01097 DIP:DIP-31568N IntAct:Q01097
MINT:MINT-135847 STRING:Q01097 PhosphoSite:Q01097 PaxDb:Q01097
PRIDE:Q01097 GeneID:14812 KEGG:mmu:14812 UCSC:uc009elq.1
InParanoid:Q01097 BindingDB:Q01097 ChEMBL:CHEMBL3442 NextBio:287003
Genevestigator:Q01097 GermOnline:ENSMUSG00000030209 Uniprot:Q01097
Length = 1482
Score = 190 (71.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 102/419 (24%), Positives = 180/419 (42%)
Query: 197 GLVSAGLNT--YGLYAY--DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLK 252
GL+S + YGL A D + + + ++EH+ +P+ K++ + +
Sbjct: 276 GLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSF-------IPEPKSSCYNTHEKR 328
Query: 253 VFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDGS-- 309
++ L R L+ F G + + F++D + +I ++K + RVG W D S
Sbjct: 329 IYQSN-MLNRYLINVTFEGRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQ 385
Query: 310 -GFSVLP---PETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RI 360
+ V P PET Q D L +T E P +VI ++ PL R
Sbjct: 386 MKYYVWPRMCPET-------EEQEDDHLSIVTLE----EAP--FVIVESVDPLSGTCMRN 432
Query: 361 GVPRRASFVGF-VTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS---- 412
VP + + T+E + K +G+CIDIL + K V + Y L +G
Sbjct: 433 TVPCQKRIISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFT--YDLYLVTNGKHGKKI 490
Query: 413 NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVF 472
N +++G++ V AVG + I R+++VDFS P+I TG+ ++ +N S F
Sbjct: 491 NGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAF 550
Query: 473 LKPFTVEMWCVTAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSF 522
L+PF+ ++W + +++ AV +++ E+ R D R P P I +
Sbjct: 551 LEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLW 610
Query: 523 STLFKT-----NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
+F N + T S + +SYTA+L++ + ++ V G+
Sbjct: 611 GLVFNNSVPVQNPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 96 (38.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 42/209 (20%), Positives = 92/209 (44%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLSDSLRIQKSRLI 610
+SYTA+L++ + ++ V G+ ND+ ++ G+ ++R + +
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMH 703
Query: 611 S-LG--SPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGW 663
+ +G + + AL + G + A + + + ++ G+ F +G+
Sbjct: 704 AYMGKFNQRGVDDALLS-LKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGY 762
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G A Q+DS + AIL+L +G +++L W C E+ + QL + + G
Sbjct: 763 GIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS-QLDIDNMAG 820
Query: 724 LYLLCGTITFTAFLVFLLRMVCQYVRYKQ 752
++ + G A + L+ +C+++ Y Q
Sbjct: 821 VFYMLGA----AMALSLITFICEHLFYWQ 845
Score = 60 (26.2 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y Y ++ ++ + + +E + ++
Sbjct: 143 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIENSFVGWELE 200
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT 146
L L + + D + + N K L + +++ + + IF A + + Y W+
Sbjct: 201 EVLLLDMSLDDGD-SKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVP 259
Query: 147 DWLSATLESFSKMNQTSL 164
++ ++ T L
Sbjct: 260 SLVAGDTDTVPSEFPTGL 277
>RGD|2738 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, N-methyl D-aspartate
2B" species:10116 "Rattus norvegicus" [GO:0001101 "response to acid"
evidence=IEP] [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001662 "behavioral fear response"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=IEA;ISO]
[GO:0001967 "suckling behavior" evidence=IEA;ISO] [GO:0001975
"response to amphetamine" evidence=IEP] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA;ISO;IDA] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005149 "interleukin-1 receptor binding" evidence=IPI]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006816 "calcium ion transport" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0007423
"sensory organ development" evidence=IEA;ISO] [GO:0007611 "learning
or memory" evidence=TAS] [GO:0007612 "learning" evidence=IEA;ISO]
[GO:0007613 "memory" evidence=IEA;ISO;IDA] [GO:0007616 "long-term
memory" evidence=IEP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008021 "synaptic vesicle" evidence=IEA;ISO]
[GO:0008144 "drug binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0008306 "associative learning"
evidence=IMP] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009790 "embryo development" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010042 "response to
manganese ion" evidence=IEP] [GO:0010350 "cellular response to
magnesium starvation" evidence=IEP] [GO:0010942 "positive regulation
of cell death" evidence=IMP;IDA] [GO:0014049 "positive regulation of
glutamate secretion" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016594
"glycine binding" evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=IEA;ISO;IDA]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0021987
"cerebral cortex development" evidence=IEP] [GO:0030018 "Z disc"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA] [GO:0031749
"D2 dopamine receptor binding" evidence=IPI] [GO:0032026 "response to
magnesium ion" evidence=IEP] [GO:0033555 "multicellular organismal
response to stress" evidence=IEP] [GO:0034097 "response to cytokine
stimulus" evidence=IEP] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035255 "ionotropic glutamate receptor
binding" evidence=IPI] [GO:0042165 "neurotransmitter binding"
evidence=IDA] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042596 "fear response" evidence=ISO] [GO:0042734 "presynaptic
membrane" evidence=ISO;IDA] [GO:0043005 "neuron projection"
evidence=ISO;IDA] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043408 "regulation of MAPK cascade" evidence=IMP] [GO:0045202
"synapse" evidence=ISO;IDA;TAS] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEA;IEP;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0048167 "regulation of synaptic
plasticity" evidence=IEA;ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048266 "behavioral
response to pain" evidence=IEA;ISO] [GO:0048511 "rhythmic process"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=IEA;ISO] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051602 "response to electrical
stimulus" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA;ISO] [GO:0060416
"response to growth hormone stimulus" evidence=IEP] [GO:0060992
"response to fungicide" evidence=IEP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO] [GO:0071230 "cellular response
to amino acid stimulus" evidence=IEP] [GO:0071287 "cellular response
to manganese ion" evidence=IEP] [GO:0071359 "cellular response to
dsRNA" evidence=IEP] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEP] [GO:0071396 "cellular response to lipid"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738
GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966 GO:GO:0051602
GO:GO:0008270 GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975 GO:GO:0014049
GO:GO:0048511 GO:GO:0030288 GO:GO:0051707 GO:GO:0043083 GO:GO:0010942
GO:GO:0001508 GO:GO:0008306 GO:GO:0043113 GO:GO:0033555 GO:GO:0046982
GO:GO:0009743 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0051597 GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0043408 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0071359 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 TCDB:1.A.10.1.6
CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419
IPI:IPI00326061 PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711
PDB:3JPW PDB:3JPY PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY
PDBsum:3QEL PDBsum:3QEM ProteinModelPortal:Q00960 SMR:Q00960
DIP:DIP-33702N IntAct:Q00960 MINT:MINT-104014 STRING:Q00960
PhosphoSite:Q00960 PRIDE:Q00960 GeneID:24410 KEGG:rno:24410
UCSC:RGD:2738 InParanoid:Q00960 BindingDB:Q00960 ChEMBL:CHEMBL311
EvolutionaryTrace:Q00960 NextBio:603231 Genevestigator:Q00960
GermOnline:ENSRNOG00000008766 Uniprot:Q00960
Length = 1482
Score = 190 (71.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 102/419 (24%), Positives = 180/419 (42%)
Query: 197 GLVSAGLNT--YGLYAY--DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLK 252
GL+S + YGL A D + + + ++EH+ +P+ K++ + +
Sbjct: 276 GLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSF-------IPEPKSSCYNTHEKR 328
Query: 253 VFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDGS-- 309
++ L R L+ F G + + F++D + +I ++K + RVG W D S
Sbjct: 329 IYQSN-MLNRYLINVTFEGRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQ 385
Query: 310 -GFSVLP---PETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RI 360
+ V P PET Q D L +T E P +VI ++ PL R
Sbjct: 386 MKYYVWPRMCPET-------EEQEDDHLSIVTLE----EAP--FVIVESVDPLSGTCMRN 432
Query: 361 GVPRRASFVGF-VTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS---- 412
VP + + T+E + K +G+CIDIL + K V + Y L +G
Sbjct: 433 TVPCQKRIISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFT--YDLYLVTNGKHGKKI 490
Query: 413 NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVF 472
N +++G++ V AVG + I R+++VDFS P+I TG+ ++ +N S F
Sbjct: 491 NGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAF 550
Query: 473 LKPFTVEMWCVTAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSF 522
L+PF+ ++W + +++ AV +++ E+ R D R P P I +
Sbjct: 551 LEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLW 610
Query: 523 STLFKT-----NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
+F N + T S + +SYTA+L++ + ++ V G+
Sbjct: 611 GLVFNNSVPVQNPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 96 (38.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 42/209 (20%), Positives = 92/209 (44%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLSDSLRIQKSRLI 610
+SYTA+L++ + ++ V G+ ND+ ++ G+ ++R + +
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMH 703
Query: 611 S-LG--SPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGW 663
+ +G + + AL + G + A + + + ++ G+ F +G+
Sbjct: 704 AYMGKFNQRGVDDALLS-LKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGY 762
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G A Q+DS + AIL+L +G +++L W C E+ + QL + + G
Sbjct: 763 GIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS-QLDIDNMAG 820
Query: 724 LYLLCGTITFTAFLVFLLRMVCQYVRYKQ 752
++ + G A + L+ +C+++ Y Q
Sbjct: 821 VFYMLGA----AMALSLITFICEHLFYWQ 845
Score = 60 (26.2 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y Y ++ ++ + + +E + ++
Sbjct: 143 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIENSFVGWELE 200
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT 146
L L + + D + + N K L + +++ + + IF A + + Y W+
Sbjct: 201 EVLLLDMSLDDGD-SKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVP 259
Query: 147 DWLSATLESFSKMNQTSL 164
++ ++ T L
Sbjct: 260 SLVAGDTDTVPSEFPTGL 277
>UNIPROTKB|Q00960 [details] [associations]
symbol:Grin2b "Glutamate receptor ionotropic, NMDA 2B"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738 GO:GO:0021987
GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0008144 GO:GO:0042220
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975
GO:GO:0014049 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043083 GO:GO:0010942 GO:GO:0001508 GO:GO:0008306
GO:GO:0043113 GO:GO:0033555 GO:GO:0046982 GO:GO:0009743
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597
GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 TCDB:1.A.10.1.6 CTD:2904 KO:K05210
OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419 IPI:IPI00326061
PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711 PDB:3JPW PDB:3JPY
PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY PDBsum:3QEL PDBsum:3QEM
ProteinModelPortal:Q00960 SMR:Q00960 DIP:DIP-33702N IntAct:Q00960
MINT:MINT-104014 STRING:Q00960 PhosphoSite:Q00960 PRIDE:Q00960
GeneID:24410 KEGG:rno:24410 UCSC:RGD:2738 InParanoid:Q00960
BindingDB:Q00960 ChEMBL:CHEMBL311 EvolutionaryTrace:Q00960
NextBio:603231 Genevestigator:Q00960 GermOnline:ENSRNOG00000008766
Uniprot:Q00960
Length = 1482
Score = 190 (71.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 102/419 (24%), Positives = 180/419 (42%)
Query: 197 GLVSAGLNT--YGLYAY--DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLK 252
GL+S + YGL A D + + + ++EH+ +P+ K++ + +
Sbjct: 276 GLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSF-------IPEPKSSCYNTHEKR 328
Query: 253 VFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDGS-- 309
++ L R L+ F G + + F++D + +I ++K + RVG W D S
Sbjct: 329 IYQSN-MLNRYLINVTFEGRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQ 385
Query: 310 -GFSVLP---PETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RI 360
+ V P PET Q D L +T E P +VI ++ PL R
Sbjct: 386 MKYYVWPRMCPET-------EEQEDDHLSIVTLE----EAP--FVIVESVDPLSGTCMRN 432
Query: 361 GVPRRASFVGF-VTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS---- 412
VP + + T+E + K +G+CIDIL + K V + Y L +G
Sbjct: 433 TVPCQKRIISENKTDEEPGYIKKCCKGFCIDILKKISKSVKFT--YDLYLVTNGKHGKKI 490
Query: 413 NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVF 472
N +++G++ V AVG + I R+++VDFS P+I TG+ ++ +N S F
Sbjct: 491 NGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAF 550
Query: 473 LKPFTVEMWCVTAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSF 522
L+PF+ ++W + +++ AV +++ E+ R D R P P I +
Sbjct: 551 LEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLW 610
Query: 523 STLFKT-----NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
+F N + T S + +SYTA+L++ + ++ V G+
Sbjct: 611 GLVFNNSVPVQNPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 96 (38.9 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 42/209 (20%), Positives = 92/209 (44%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLSDSLRIQKSRLI 610
+SYTA+L++ + ++ V G+ ND+ ++ G+ ++R + +
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMH 703
Query: 611 S-LG--SPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGW 663
+ +G + + AL + G + A + + + ++ G+ F +G+
Sbjct: 704 AYMGKFNQRGVDDALLS-LKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGY 762
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G A Q+DS + AIL+L +G +++L W C E+ + QL + + G
Sbjct: 763 GIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS-QLDIDNMAG 820
Query: 724 LYLLCGTITFTAFLVFLLRMVCQYVRYKQ 752
++ + G A + L+ +C+++ Y Q
Sbjct: 821 VFYMLGA----AMALSLITFICEHLFYWQ 845
Score = 60 (26.2 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y Y ++ ++ + + +E + ++
Sbjct: 143 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIENSFVGWELE 200
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT 146
L L + + D + + N K L + +++ + + IF A + + Y W+
Sbjct: 201 EVLLLDMSLDDGD-SKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVP 259
Query: 147 DWLSATLESFSKMNQTSL 164
++ ++ T L
Sbjct: 260 SLVAGDTDTVPSEFPTGL 277
>UNIPROTKB|E1BKL6 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0031630 "regulation of synaptic vesicle fusion to
presynaptic membrane" evidence=IEA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0035249 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:NINSVME GO:GO:0031630 EMBL:DAAA02047229
EMBL:DAAA02047230 EMBL:DAAA02047231 IPI:IPI00838934
Ensembl:ENSBTAT00000015567 Uniprot:E1BKL6
Length = 972
Score = 175 (66.7 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 59/238 (24%), Positives = 107/238 (44%)
Query: 362 VPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSY 416
V RR +F E + +G+C+D+L E +L+ + Y+ L DGL N S+
Sbjct: 428 VMRRPNFQALSGNE----RFEGFCVDMLRELAELLRFR--YRLRLVEDGLYGAPEPNGSW 481
Query: 417 DGLV-KMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLK 474
G+V +++ D AV I R K++DFS+P+++ G+ I+ ++ K + FL
Sbjct: 482 TGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLD 541
Query: 475 PFTVEMWCVTAASFVMIAVVIWILE-------HRVNDDFRGPPR---RQ--IATMFLFSF 522
PF+ +W +++ ++ V+++ + + R P Q + F
Sbjct: 542 PFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPV 601
Query: 523 STLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+ E +L R I SSYTA+L++ LTVQ++ V+ + L
Sbjct: 602 GGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDL 659
Score = 98 (39.6 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 51/202 (25%), Positives = 88/202 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY---QVGSFAYSYLSDSLRIQKSR 608
I SSYTA+L++ LTVQ++ V+ + L + I Y GS ++ +S R
Sbjct: 632 IISSYTANLAAFLTVQRMEVPVESADDL-ADQTNIEYGTIHAGS-TMTFFQNSRYQTYQR 689
Query: 609 L---ISLGSPEDYERALRQG-PR--NGGVAAIVDEL--PYVQLFLSNQTDFGIIGQPFTR 660
+ + P + ++ +G R N A +++ Y + N T G G T+
Sbjct: 690 MWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQIG--GLLDTK 747
Query: 661 SGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLIS 720
G+G SP + A++ + N L+ L KW+ CP+E ++ + I
Sbjct: 748 -GYGIGMPLGSPPRPITTLALVSGTWNHHLEILKRKWWEGGRCPKEEDHRAKGLGMENIG 806
Query: 721 FWGLYLLCGTI--TFTAFLVFL 740
+ L+CG I F A + F+
Sbjct: 807 GIFVVLICGLIIAVFVAVMEFI 828
Score = 67 (28.6 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 229 NITFSASHELPDSKATRVQ---LEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIV 285
++ SA EL S+ V+ ++ GT L+ L + GL+G+V+FN
Sbjct: 312 HVVVSAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRT 371
Query: 286 SRGYDVINIDKMEIHRVGYWF 306
+ ++ + +G W+
Sbjct: 372 NYTLRILEKSRQGHREIGVWY 392
>UNIPROTKB|Q13224 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016594 "glycine binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0007611
"learning or memory" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0043005 "neuron
projection" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0030018 GO:GO:0071363
GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0007268
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0043005
GO:GO:0007616 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0001975 GO:GO:0014049 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043083
GO:GO:0010942 GO:GO:0001508 GO:GO:0008306 GO:GO:0043113
GO:GO:0009743 Pathway_Interaction_DB:reelinpathway GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597 GO:GO:0060416
GO:GO:0071230 GO:GO:0071396 DrugBank:DB00836 Orphanet:178469
GO:GO:0001964 GO:GO:0050806 GO:GO:0032026 DrugBank:DB00502
DrugBank:DB01043 DrugBank:DB00949 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM
EMBL:U90278 EMBL:U88963 EMBL:U11287 EMBL:BC113618 EMBL:BC113620
EMBL:U28758 EMBL:U28861 EMBL:U28862 IPI:IPI00297933 PIR:I39066
PIR:S52086 RefSeq:NP_000825.2 UniGene:Hs.654430 PDB:1S11 PDB:1S2S
PDB:2IPV PDBsum:1S11 PDBsum:1S2S PDBsum:2IPV
ProteinModelPortal:Q13224 SMR:Q13224 IntAct:Q13224 MINT:MINT-127466
STRING:Q13224 PhosphoSite:Q13224 DMDM:14548162 PaxDb:Q13224
PeptideAtlas:Q13224 PRIDE:Q13224 Ensembl:ENST00000279593
GeneID:2904 KEGG:hsa:2904 UCSC:uc001rbt.2 GeneCards:GC12M013614
H-InvDB:HIX0036873 HGNC:HGNC:4586 MIM:138252 MIM:613970
neXtProt:NX_Q13224 PharmGKB:PA28980 InParanoid:Q13224 OMA:CTNRSHL
PhylomeDB:Q13224 BindingDB:Q13224 ChEMBL:CHEMBL1904 GenomeRNAi:2904
NextBio:11499 ArrayExpress:Q13224 Bgee:Q13224 CleanEx:HS_GRIN2B
Genevestigator:Q13224 GermOnline:ENSG00000150086 Uniprot:Q13224
Length = 1484
Score = 189 (71.6 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 103/419 (24%), Positives = 180/419 (42%)
Query: 197 GLVSAGLNT--YGLYAY--DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLK 252
GL+S + YGL A D + + + ++EH+ +P+ K++ + +
Sbjct: 276 GLISVSYDEWDYGLPARVRDGIAIITTAASDMLSEHSF-------IPEPKSSCYNTHEKR 328
Query: 253 VFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDGS-- 309
++ L R L+ F G + + F++D + +I ++K + RVG W D S
Sbjct: 329 IYQSN-MLNRYLINVTFEGRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQ 385
Query: 310 -GFSVLP---PETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RI 360
+ V P PET Q D L +T E P +VI ++ PL R
Sbjct: 386 MKYYVWPRMCPET-------EEQEDDHLSIVTLE----EAP--FVIVESVDPLSGTCMRN 432
Query: 361 GVPRRASFVGF-VTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS---- 412
VP + V T+E + K +G+CIDIL + K V + Y L +G
Sbjct: 433 TVPCQKRIVTENKTDEEPGYIKKCCKGFCIDILKKISKSVKFT--YDLYLVTNGKHGKKI 490
Query: 413 NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVF 472
N +++G++ V AVG + I R+++VDFS P+I TG+ ++ +N S F
Sbjct: 491 NGTWNGMIGEVVMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAF 550
Query: 473 LKPFTVEMWCVTAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSF 522
L+PF+ ++W + +++ AV +++ E+ R D R P P I +
Sbjct: 551 LEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLW 610
Query: 523 STLFKT-----NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
+F N + T S + +SYTA+L++ + ++ V G+
Sbjct: 611 GLVFNNSVPVQNPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 96 (38.9 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 42/209 (20%), Positives = 92/209 (44%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLSDSLRIQKSRLI 610
+SYTA+L++ + ++ V G+ ND+ ++ G+ ++R + +
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMH 703
Query: 611 S-LG--SPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGW 663
+ +G + + AL + G + A + + + ++ G+ F +G+
Sbjct: 704 AYMGKFNQRGVDDALLS-LKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGY 762
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G A Q+DS + AIL+L +G +++L W C E+ + QL + + G
Sbjct: 763 GIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS-QLDIDNMAG 820
Query: 724 LYLLCGTITFTAFLVFLLRMVCQYVRYKQ 752
++ + G A + L+ +C+++ Y Q
Sbjct: 821 VFYMLGA----AMALSLITFICEHLFYWQ 845
Score = 59 (25.8 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 21/118 (17%), Positives = 52/118 (44%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y Y ++ ++ + + +E + ++
Sbjct: 143 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIENSFVGWELE 200
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
L L + + D + + N K L + +++ + + IF A + + Y W+
Sbjct: 201 EVLLLDMSLDDGD-SKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 257
>UNIPROTKB|F5H470 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AL356213
EMBL:AL035426 EMBL:AL590139 EMBL:Z83848 EMBL:Z82899 HGNC:HGNC:4573
ChiTaRS:GRIA3 IPI:IPI01012695 ProteinModelPortal:F5H470 SMR:F5H470
Ensembl:ENST00000542149 ArrayExpress:F5H470 Bgee:F5H470
Uniprot:F5H470
Length = 824
Score = 156 (60.0 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 34/128 (26%), Positives = 68/128 (53%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS---YDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K V + YK + GDG +P ++G+V + D A
Sbjct: 448 NERYEGYCVDLAYEIAKHVR--IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIA 505
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
V + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 506 VAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 565
Query: 491 IAVVIWIL 498
++VV++++
Sbjct: 566 VSVVLFLV 573
Score = 120 (47.3 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 49/206 (23%), Positives = 82/206 (39%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + +
Sbjct: 659 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKT 717
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
G G A +++ + D +G G+G A + S L
Sbjct: 718 TADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNA 777
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG 702
++ A+LKL+E G+L KL KW+ +G
Sbjct: 778 VNLAVLKLNEQGLLDKLKNKWWYDKG 803
Score = 60 (26.2 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 48/289 (16%), Positives = 112/289 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A+ L+ Y W++ + +Y D + G + + A+ +N +V+ + ++ Q ++
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEFRRII 206
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTS 163
+ R Y++ + RI T +++ ++ + ++ A L F+ +
Sbjct: 207 EEMDRRQEKR-YLIDCEVE---RINTILEQVVILGKHS--RGYHYMLANL-GFTDILLE- 258
Query: 164 LRILQG---VVGLRQHTPDSIPKKAFLSRWSGMQQKGLV---SAGLNTYGLYAYDTVWAV 217
R++ G + G + ++ + F+ RW + ++ +A L +D + +
Sbjct: 259 -RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSALTHDAILVI 317
Query: 218 ARSIDKFINEHNITFSASHELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
A + +++ + S D A V Q G + R L G++G +
Sbjct: 318 AEAF-RYLRRQRVDVSRRGSAGDCLANPAVPWSQ------GIDIERALKMVQVQGMTGNI 370
Query: 277 QFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
QF+ + DV + + GYW + F + + + S
Sbjct: 371 QFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQISNDSAS 419
>WB|WBGene00001615 [details] [associations]
symbol:glr-4 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371 HSSP:P19491
EMBL:FO080131 GeneID:174258 KEGG:cel:CELE_C06A8.9 CTD:174258
PIR:T15429 RefSeq:NP_001254126.1 ProteinModelPortal:Q17697
SMR:Q17697 EnsemblMetazoa:C06A8.9a UCSC:C06A8.9 WormBase:C06A8.9a
InParanoid:Q17697 OMA:IESRHEA NextBio:883261 ArrayExpress:Q17697
Uniprot:Q17697
Length = 951
Score = 167 (63.8 bits), Expect = 4.9e-16, Sum P(4) = 4.9e-16
Identities = 70/283 (24%), Positives = 127/283 (44%)
Query: 481 WCVTAASFVMIAVVI---WILEHRVND-DFRGPPRRQ----IATMFLFSFSTLFKTNQEA 532
+C+ + S ++A W R+++ DF ++ + F F+ +L + +
Sbjct: 542 YCIVSYSMHILAKFSPYEWYNLERIDERDFENIKNQKNQFTVLNSFWFTMGSLMQQGSDV 601
Query: 533 TVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV- 590
+ R I SSYTA L++ LTV+++ST ++ + L N I Y V
Sbjct: 602 IPRAAATRLIAVVWWMFTQIIISSYTAQLAAFLTVERMSTPIESTQDL-ANQQKIRYGVL 660
Query: 591 --GSFAYSYLSDSLRIQKSRLISL---GSPEDYERALRQG---PRNGGVAAIVDELPYVQ 642
GS + +S R+ S+ SP + + R+G ++GG A ++ E ++
Sbjct: 661 KSGS-TMDFFRESKIPMYERMWSVMESSSPGVFVNSSREGIARVKSGGYAYMM-ESSMLE 718
Query: 643 LFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFC--K 700
+L + IG G+G A + SPL +S +L+L E +L+ L KW+ +
Sbjct: 719 YYLERDCELQSIGGLLDSKGYGIALPKGSPLRDILSRTVLQLQERTILEALKNKWWRDRR 778
Query: 701 EG--C---PEERRQHSEPHQLRLISFWGLYLLCGTITFTAFLV 738
EG C P E+ +S+P + +G++ + T AFL+
Sbjct: 779 EGPSCGPPPSEKATNSKPQNI-----FGIFYVLLTGLIVAFLL 816
Score = 129 (50.5 bits), Expect = 4.9e-16, Sum P(4) = 4.9e-16
Identities = 29/126 (23%), Positives = 69/126 (54%)
Query: 379 HKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSNPS--YDGLVKMVANDVFDAAVGDI 435
++ +G+CID+L E +++ ++ G G+ + S ++G++ + D ++ +
Sbjct: 427 NQYEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDESGRWNGIIGALQRHEADLSLSAV 486
Query: 436 AIVTNRTKIVDFSQPYISTGL-VIVAPINNH--KASAWVFLKPFTVEMWCVTAASFVMIA 492
I +R ++VDF+ P++ G+ +++A + K S W FL+P ++ +W S+ +++
Sbjct: 487 TITYSRAEVVDFTLPFMHLGISILLARTSEETDKGSLWTFLEPLSLTVWISLLISYCIVS 546
Query: 493 VVIWIL 498
+ IL
Sbjct: 547 YSMHIL 552
Score = 44 (20.5 bits), Expect = 4.9e-16, Sum P(4) = 4.9e-16
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 261 LRKLLQTNFTGLSGQVQF--NQDRN-IVSRGYDVINIDKMEIHRVGYWFDGSGFS 312
+RKL N L+G VQF N +R+ I+ G IN + ++G W + G++
Sbjct: 336 IRKLKLRN--QLTGDVQFKSNGERDDIMYHGVGRIN---SQFVKLGNWSEKRGWN 385
Score = 39 (18.8 bits), Expect = 4.9e-16, Sum P(4) = 4.9e-16
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 69 NGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL---LNN 106
N I+ L N+L++ + P F D+++L LNN
Sbjct: 223 NNITVLYNLLQQARGLNMAEPPFSYVFTNTDLSLLEDFLNN 263
>UNIPROTKB|B7Z1W1 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AC010613
EMBL:AC025156 EMBL:AC091960 EMBL:AC091962 UniGene:Hs.519693
UniGene:Hs.737709 HGNC:HGNC:4571 HOVERGEN:HBG051839 EMBL:AK294011
IPI:IPI00956375 SMR:B7Z1W1 STRING:B7Z1W1 Ensembl:ENST00000537037
Uniprot:B7Z1W1
Length = 716
Score = 177 (67.4 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 388 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 445
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 446 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 505
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 506 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 565
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 566 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 607
Score = 109 (43.4 bits), Expect = 5.7e-16, Sum P(2) = 5.7e-16
Identities = 63/276 (22%), Positives = 105/276 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +ID Y W++ + IY D D G + + L EKN + + + + +
Sbjct: 86 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRM 141
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
L + + R+ VV + I KL+ Y ++ + ++ L F S
Sbjct: 142 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 201
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGLNTY-GLYAYDTVW 215
N T +++ +T D+IP K + +W S + V Y YD V
Sbjct: 202 ANVTGFQLVN-------YT-DTIPAK-IMQQWKNSDARDHTRVDWKRPKYTSALTYDGVK 252
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + I S D A + G + R L Q F GL+G
Sbjct: 253 VMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLTGN 306
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
VQFN+ + VI + I ++GYW + F
Sbjct: 307 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 342
>UNIPROTKB|F1N3G8 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0009986
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 GO:GO:0030288 GO:GO:0032281
GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2890
KO:K05197 OMA:ARIMQQW EMBL:DAAA02020690 EMBL:DAAA02020691
EMBL:DAAA02020692 EMBL:DAAA02020693 EMBL:DAAA02020694
EMBL:DAAA02020695 EMBL:DAAA02020696 EMBL:DAAA02020697
EMBL:DAAA02020698 EMBL:DAAA02020699 EMBL:DAAA02020700
EMBL:DAAA02020701 EMBL:DAAA02020702 IPI:IPI01000809
RefSeq:XP_002704933.2 UniGene:Bt.110838 Ensembl:ENSBTAT00000007628
GeneID:529618 KEGG:bta:529618 Uniprot:F1N3G8
Length = 837
Score = 177 (67.4 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 365 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 422
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 423 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 482
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 483 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 542
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 543 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 584
Score = 135 (52.6 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 61/250 (24%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 524 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 583
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 584 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 642
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 643 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 702
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 703 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 760
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 761 YKSRSESKRM 770
Score = 110 (43.8 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 63/276 (22%), Positives = 105/276 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +ID Y W++ + IY D D G + + L EKN + + + + +
Sbjct: 63 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRM 118
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
L + + R+ VV + I KL+ Y ++ + ++ L F S
Sbjct: 119 LFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLGFMDIDLNKFKESG 178
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGLNTY-GLYAYDTVW 215
N T +++ +T D+IP K + +W S + V Y YD V
Sbjct: 179 ANVTGFQLVN-------YT-DTIPAK-IMQQWKNSDARDHTRVDWKRPKYTSALTYDGVK 229
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + I S D A + G + R L Q F GL+G
Sbjct: 230 VMAEAFQN-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLTGN 283
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
VQFN+ + VI + I ++GYW + F
Sbjct: 284 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 319
Score = 41 (19.5 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 301 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 351
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 326 HSQLDWKLQN----ITWPGGKTETPRGWVIADNARPLRIGVPRRAS 367
H+++DWK +T+ G K N R RI + RR +
Sbjct: 209 HTRVDWKRPKYTSALTYDGVKVMAEA----FQNLRRQRIDISRRGN 250
>UNIPROTKB|F1PDR1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03003077 Ensembl:ENSCAFT00000028234
Uniprot:F1PDR1
Length = 806
Score = 177 (67.4 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 434 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 491
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 492 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 551
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 552 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 611
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 612 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 125 (49.1 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 47/194 (24%), Positives = 81/194 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 593 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 652
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 653 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 689 MLQKLHEKWFCKEG 702
+L KL KW+ +G
Sbjct: 772 LLDKLKNKWWYDKG 785
Score = 109 (43.4 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 63/276 (22%), Positives = 105/276 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +ID Y W++ + IY D D G + + L EKN + + + + +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRM 187
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
L + + R+ VV + I KL+ Y ++ + ++ L F S
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGLNTY-GLYAYDTVW 215
N T +++ +T D+IP K + +W S + V Y YD V
Sbjct: 248 ANVTGFQLVN-------YT-DTIPAK-IMQQWKNSDARDHTRVDWKRPKYTSALTYDGVK 298
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + I S D A + G + R L Q F GL+G
Sbjct: 299 VMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLTGN 352
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
VQFN+ + VI + I ++GYW + F
Sbjct: 353 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 388
Score = 41 (19.5 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 370 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 420
>UNIPROTKB|F1PDP9 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2890 KO:K05197 OMA:ARIMQQW EMBL:AAEX03003077
RefSeq:XP_853398.1 ProteinModelPortal:F1PDP9
Ensembl:ENSCAFT00000028256 GeneID:489168 KEGG:cfa:489168
Uniprot:F1PDP9
Length = 906
Score = 177 (67.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 434 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 491
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 492 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 551
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 552 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 611
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 612 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 135 (52.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 61/250 (24%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 593 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 652
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 653 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 829
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 830 YKSRSESKRM 839
Score = 109 (43.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 63/276 (22%), Positives = 105/276 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +ID Y W++ + IY D D G + + L EKN + + + + +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRM 187
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
L + + R+ VV + I KL+ Y ++ + ++ L F S
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGLNTY-GLYAYDTVW 215
N T +++ +T D+IP K + +W S + V Y YD V
Sbjct: 248 ANVTGFQLVN-------YT-DTIPAK-IMQQWKNSDARDHTRVDWKRPKYTSALTYDGVK 298
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + I S D A + G + R L Q F GL+G
Sbjct: 299 VMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLTGN 352
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
VQFN+ + VI + I ++GYW + F
Sbjct: 353 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 388
Score = 41 (19.5 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 370 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 420
>UNIPROTKB|P42261 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007616 "long-term memory" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030425 "dendrite"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0008066 "glutamate
receptor activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] [GO:0009986 "cell
surface" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0044309 "neuron spine" evidence=ISS] [GO:0030165
"PDZ domain binding" evidence=ISS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 GO:GO:0009986 EMBL:CH471062 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 DrugBank:DB00142 GO:GO:0030288
GO:GO:0032281 GO:GO:0031623 GO:GO:0030165 GO:GO:0032590
DrugBank:DB01159 InterPro:IPR001828 DrugBank:DB01189
DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028 DrugBank:DB01236
GO:GO:0030666 Pathway_Interaction_DB:ephbfwdpathway
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 EMBL:M64752 EMBL:X58633 EMBL:M81886
EMBL:AK295039 EMBL:AK295827 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 EMBL:BC111734 IPI:IPI00030880
IPI:IPI00219124 PIR:A40222 PIR:A41273 PIR:S25852 PIR:S38723
RefSeq:NP_000818.2 RefSeq:NP_001107655.1 RefSeq:NP_001244948.1
RefSeq:NP_001244950.1 RefSeq:NP_001244952.1 UniGene:Hs.519693
UniGene:Hs.737709 ProteinModelPortal:P42261 SMR:P42261
DIP:DIP-41487N MINT:MINT-271172 STRING:P42261 PhosphoSite:P42261
DMDM:116242505 PaxDb:P42261 PRIDE:P42261 Ensembl:ENST00000285900
Ensembl:ENST00000340592 Ensembl:ENST00000518142
Ensembl:ENST00000544403 Ensembl:ENST00000544794 GeneID:2890
KEGG:hsa:2890 UCSC:uc003luy.4 UCSC:uc003lva.4 CTD:2890
GeneCards:GC05P152850 H-InvDB:HIX0032120 HGNC:HGNC:4571
HPA:CAB001965 MIM:138248 neXtProt:NX_P42261 PharmGKB:PA28966
HOVERGEN:HBG051839 KO:K05197 OrthoDB:EOG479F6B PhylomeDB:P42261
BindingDB:P42261 ChEMBL:CHEMBL2009 GenomeRNAi:2890 NextBio:11425
ArrayExpress:P42261 Bgee:P42261 CleanEx:HS_GRIA1
Genevestigator:P42261 GermOnline:ENSG00000155511 GO:GO:0015277
Uniprot:P42261
Length = 906
Score = 177 (67.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 434 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 491
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 492 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 551
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 552 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 611
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 612 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 135 (52.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 61/250 (24%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 593 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 652
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 653 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 829
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 830 YKSRSESKRM 839
Score = 109 (43.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 63/276 (22%), Positives = 105/276 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +ID Y W++ + IY D D G + + L EKN + + + + +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRM 187
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
L + + R+ VV + I KL+ Y ++ + ++ L F S
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGLNTY-GLYAYDTVW 215
N T +++ +T D+IP K + +W S + V Y YD V
Sbjct: 248 ANVTGFQLVN-------YT-DTIPAK-IMQQWKNSDARDHTRVDWKRPKYTSALTYDGVK 298
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + I S D A + G + R L Q F GL+G
Sbjct: 299 VMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLTGN 352
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
VQFN+ + VI + I ++GYW + F
Sbjct: 353 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 388
Score = 41 (19.5 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 370 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 420
>UNIPROTKB|Q38PU8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0014069
"postsynaptic density" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0043197 "dendritic
spine" evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0005789 GO:GO:0030054 GO:GO:0045211
GO:GO:0030288 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 EMBL:DQ159929 HSSP:P19491
ProteinModelPortal:Q38PU8 SMR:Q38PU8 Uniprot:Q38PU8
Length = 906
Score = 177 (67.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 434 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 491
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 492 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 551
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 552 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 611
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 612 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 135 (52.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 61/250 (24%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 593 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 652
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 653 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 829
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 830 YKSRSESKRM 839
Score = 109 (43.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 63/276 (22%), Positives = 105/276 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +ID Y W++ + IY D D G + + L EKN + + + + +
Sbjct: 132 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRM 187
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
L + + R+ VV + I KL+ Y ++ + ++ L F S
Sbjct: 188 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 247
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGLNTY-GLYAYDTVW 215
N T +++ +T D+IP K + +W S + V Y YD V
Sbjct: 248 ANVTGFQLVN-------YT-DTIPAK-IMQQWKNSDARDHTRVDWKRPKYTSALTYDGVK 298
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + I S D A + G + R L Q F GL+G
Sbjct: 299 VMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLTGN 352
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
VQFN+ + VI + I ++GYW + F
Sbjct: 353 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 388
Score = 41 (19.5 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 370 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 420
>UNIPROTKB|B7Z9G9 [details] [associations]
symbol:GRIA1 "cDNA, FLJ78833, highly similar to Glutamate
receptor 1" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
HOVERGEN:HBG051839 KO:K05197 EMBL:AK315934 IPI:IPI00978580
RefSeq:NP_001244951.1 SMR:B7Z9G9 STRING:B7Z9G9
Ensembl:ENST00000448073 UCSC:uc011dcy.2 Uniprot:B7Z9G9
Length = 916
Score = 177 (67.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 444 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 501
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 502 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 561
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 562 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 621
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 622 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 663
Score = 143 (55.4 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 62/250 (24%), Positives = 106/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 603 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 662
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 663 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 721
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 722 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQG 781
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 782 VLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 839
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 840 YKSRSESKRM 849
Score = 109 (43.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 63/276 (22%), Positives = 105/276 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +ID Y W++ + IY D D G + + L EKN + + + + +
Sbjct: 142 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRM 197
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
L + + R+ VV + I KL+ Y ++ + ++ L F S
Sbjct: 198 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 257
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGLNTY-GLYAYDTVW 215
N T +++ +T D+IP K + +W S + V Y YD V
Sbjct: 258 ANVTGFQLVN-------YT-DTIPAK-IMQQWKNSDARDHTRVDWKRPKYTSALTYDGVK 308
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + I S D A + G + R L Q F GL+G
Sbjct: 309 VMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLTGN 362
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
VQFN+ + VI + I ++GYW + F
Sbjct: 363 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 398
Score = 41 (19.5 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 380 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 430
>UNIPROTKB|E7ESV8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
KO:K05197 OMA:ARIMQQW IPI:IPI00978580 ProteinModelPortal:E7ESV8
SMR:E7ESV8 Ensembl:ENST00000518783 UCSC:uc011dcz.2
ArrayExpress:E7ESV8 Bgee:E7ESV8 Uniprot:E7ESV8
Length = 916
Score = 177 (67.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 444 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 501
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 502 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 561
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 562 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 621
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 622 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 663
Score = 135 (52.6 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 61/250 (24%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 603 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 662
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 663 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 721
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 722 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 781
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 782 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 839
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 840 YKSRSESKRM 849
Score = 109 (43.4 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 63/276 (22%), Positives = 105/276 (38%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKLPLPVQFNQHDITV 102
A+ +ID Y W++ + IY D D G + + L EKN + + + + +
Sbjct: 142 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNI---LTTTEEGYRM 197
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
L + + R+ VV + I KL+ Y ++ + ++ L F S
Sbjct: 198 LFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYILANLGFMDIDLNKFKESG 257
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGLNTY-GLYAYDTVW 215
N T +++ +T D+IP K + +W S + V Y YD V
Sbjct: 258 ANVTGFQLVN-------YT-DTIPAK-IMQQWKNSDARDHTRVDWKRPKYTSALTYDGVK 308
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + I S D A + G + R L Q F GL+G
Sbjct: 309 VMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQRALQQVRFEGLTGN 362
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
VQFN+ + VI + I ++GYW + F
Sbjct: 363 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 398
Score = 41 (19.5 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 380 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 430
>UNIPROTKB|F1MWI8 [details] [associations]
symbol:F1MWI8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] [GO:0051205 "protein insertion into membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0035235 GO:GO:0051924
GO:GO:0030288 GO:GO:0051205 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:HLQLDWA
EMBL:DAAA02020240 EMBL:DAAA02020241 EMBL:DAAA02020242
IPI:IPI00691902 Ensembl:ENSBTAT00000036098 Uniprot:F1MWI8
Length = 1045
Score = 241 (89.9 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 99/374 (26%), Positives = 162/374 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD--GLSNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + P+D G L + + GLV + AV +I +
Sbjct: 483 GYCIDLLERLAEDAPFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 542
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R+++VDF+ P+ ST L I+ + + F+ P MW A+ + A+ + + E
Sbjct: 543 RSQVVDFTSPFFSTSLGIMVRARDTASPIGAFMWPLHWSMWLGVFAALHLTALFLTLYEW 602
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLF-KTNQEATVSS-LGRXXXXXXXXXXXX 551
R F PR R T+F +S ++ LF +T T GR
Sbjct: 603 R--SPFGLTPRGRNRDTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRLLMNLWAIFCLL 660
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIES--LITNDWPIGYQVGSFAYSYLSDSLRIQKSRL 609
+ SSYTA+L++++ + + GI L N G++ G+ S S I+KS
Sbjct: 661 VLSSYTANLAAVMVGDKTFEELSGIHDPKLFFNXQ--GFRFGTVWES--SAEAYIKKS-- 714
Query: 610 ISLGSPEDYERALRQG-PRNG-GVAAIVDELPYVQLFLSNQT--DFGI----------IG 655
PE Y R P GVA + + P + F+ +++ D+ + +G
Sbjct: 715 ----FPEMYSHVRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCRLLTVG 770
Query: 656 QPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQ 715
+PF G+G R+SPL +S I + +G + LH+KW+ C + +E Q
Sbjct: 771 KPFVIEGYGIGLPRNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQ 830
Query: 716 LRLISFWGLY-LLC 728
+ + F GL+ LLC
Sbjct: 831 MGVYHFSGLFVLLC 844
Score = 43 (20.2 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 20/79 (25%), Positives = 29/79 (36%)
Query: 212 DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTG 271
D V VAR++D H L + L + G L R L T+F G
Sbjct: 300 DVVELVARALDSAAR-----VQPEHTLLPATVNCSDLPPPEPESSGRLLTRFLANTSFWG 354
Query: 272 LSGQVQFNQDRNI-VSRGY 289
+G V + +SR +
Sbjct: 355 RTGPVWVTNSSQVHISRRF 373
Score = 39 (18.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 321 GKNVSHSQLDW 331
G N H QLDW
Sbjct: 146 GPNPFHLQLDW 156
>UNIPROTKB|F1P0E1 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00681402 Ensembl:ENSGALT00000027749 Uniprot:F1P0E1
Length = 819
Score = 184 (69.8 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 61/240 (25%), Positives = 111/240 (46%)
Query: 366 ASFVGFVTEEHDSH----KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS--- 415
A +V F + HD+ K +GYC+D+ E K + + YK + DG +P
Sbjct: 342 APYVMF-KKNHDTFEGNDKFEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDPETKI 398
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLK 474
++G+V + + AV + I R +++DFS+P++S G+ +++ K + FL
Sbjct: 399 WNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 458
Query: 475 PFTVEMWCVTAASFVMIAVVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLF 520
P E+W +++ ++VV++++ H D GP P + I F
Sbjct: 459 PLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWF 518
Query: 521 SFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
S + + + SL GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 519 SLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 578
Score = 158 (60.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 67/262 (25%), Positives = 110/262 (41%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 506 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 565
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 566 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMKSAEPSVFTRT 624
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + SPL
Sbjct: 625 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRTP 684
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKLSE G+L KL KW+ +G C P++ + L L + G+ Y+L G +
Sbjct: 685 VNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGL 744
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 745 -AMLVALIEF-CYKSRAEAKRM 764
Score = 99 (39.9 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 63/290 (21%), Positives = 108/290 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N +VS + V+ FN
Sbjct: 58 ALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS---AICVENFNDASYRR 113
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESFSK-- 158
LL + + +V+ + + + Y ++ + + +LE F
Sbjct: 114 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 173
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ TP + K + RW + Q+ G + T L YD V
Sbjct: 174 ANVTGFQLVDF------STP-MVTK--LMQRWKKLDQREYPGSETPPKYTSAL-TYDGVL 223
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 224 VMAETF-RNLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 277
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
VQF+ V+ DV + +VGYW D ++ E G + S
Sbjct: 278 VQFDHYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTLGNDTS 327
>UNIPROTKB|F1N982 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00821478 ProteinModelPortal:F1N982
Ensembl:ENSGALT00000036434 Uniprot:F1N982
Length = 819
Score = 184 (69.8 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 61/240 (25%), Positives = 111/240 (46%)
Query: 366 ASFVGFVTEEHDSH----KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS--- 415
A +V F + HD+ K +GYC+D+ E K + + YK + DG +P
Sbjct: 342 APYVMF-KKNHDTFEGNDKFEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDPETKI 398
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLK 474
++G+V + + AV + I R +++DFS+P++S G+ +++ K + FL
Sbjct: 399 WNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 458
Query: 475 PFTVEMWCVTAASFVMIAVVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLF 520
P E+W +++ ++VV++++ H D GP P + I F
Sbjct: 459 PLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWF 518
Query: 521 SFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
S + + + SL GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 519 SLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 578
Score = 143 (55.4 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 65/262 (24%), Positives = 107/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 506 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 565
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 566 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMKSAEPSVFTRT 624
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + SPL
Sbjct: 625 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRNA 684
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 685 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 744
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 745 -AMLVALIEF-CYKSRAEAKRM 764
Score = 99 (39.9 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 63/290 (21%), Positives = 108/290 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N +VS + V+ FN
Sbjct: 58 ALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS---AICVENFNDASYRR 113
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESFSK-- 158
LL + + +V+ + + + Y ++ + + +LE F
Sbjct: 114 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 173
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ TP + K + RW + Q+ G + T L YD V
Sbjct: 174 ANVTGFQLVDF------STP-MVTK--LMQRWKKLDQREYPGSETPPKYTSAL-TYDGVL 223
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 224 VMAETF-RNLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 277
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
VQF+ V+ DV + +VGYW D ++ E G + S
Sbjct: 278 VQFDHYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTLGNDTS 327
>MGI|MGI:95808 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA1 (alpha 1)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0001965 "G-protein alpha-subunit
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IGI] [GO:0007616 "long-term memory" evidence=ISO;IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008179 "adenylate
cyclase binding" evidence=ISO] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=IDA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0009986 "cell surface" evidence=IDA]
[GO:0014069 "postsynaptic density" evidence=ISO;IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0031267 "small GTPase binding" evidence=ISO]
[GO:0031489 "myosin V binding" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] [GO:0031623 "receptor
internalization" evidence=ISO;IMP] [GO:0031681 "G-protein
beta-subunit binding" evidence=ISO] [GO:0031698 "beta-2 adrenergic
receptor binding" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032590 "dendrite
membrane" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043197
"dendritic spine" evidence=ISO;IDA] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044309 "neuron spine" evidence=ISO;IDA] [GO:0045202 "synapse"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045838 "positive regulation of membrane potential"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=ISO] [GO:0050804 "regulation of synaptic transmission"
evidence=ISO] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISO] [GO:0051018 "protein kinase A binding"
evidence=ISO] [GO:0060076 "excitatory synapse" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95808 GO:GO:0014069
GO:GO:0009986 GO:GO:0005789 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0008021 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 HOGENOM:HOG000234372 CTD:2890 HOVERGEN:HBG051839
KO:K05197 EMBL:X57497 IPI:IPI00136965 PIR:S12874
RefSeq:NP_001106796.1 UniGene:Mm.4920 ProteinModelPortal:P23818
SMR:P23818 DIP:DIP-31970N IntAct:P23818 MINT:MINT-1897734
STRING:P23818 PhosphoSite:P23818 PaxDb:P23818 PRIDE:P23818
Ensembl:ENSMUST00000036315 GeneID:14799 KEGG:mmu:14799
UCSC:uc007izs.2 InParanoid:P23818 OMA:ARIMQQW BindingDB:P23818
ChEMBL:CHEMBL3502 ChiTaRS:GRIA1 NextBio:286953 Bgee:P23818
CleanEx:MM_GRIA1 Genevestigator:P23818
GermOnline:ENSMUSG00000020524 Uniprot:P23818
Length = 907
Score = 177 (67.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 434 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 491
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 492 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 551
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 552 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 611
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 612 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 143 (55.4 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 62/250 (24%), Positives = 106/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 593 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 652
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 653 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQG 771
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 772 VLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 829
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 830 YKSRSESKRM 839
Score = 107 (42.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 64/289 (22%), Positives = 110/289 (38%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKL 89
F+ + + Q+ A+ +ID Y W+ + IY D D G + + L EKN + +
Sbjct: 121 FVLQLRPELQE--ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAEKNWQVTAVNI 177
Query: 90 PLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD-- 147
+ + +L + + R+ VV + I KL+ Y ++ +
Sbjct: 178 ---LTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLG 234
Query: 148 WLSATLESF--SKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGL 203
++ L F S N T +++ +T D+IP + + +W S + V
Sbjct: 235 FMDIDLNKFKESGANVTGFQLVN-------YT-DTIPAR-IMQQWRTSDARDHTRVDWKR 285
Query: 204 NTY-GLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLR 262
Y YD V +A + + I S D A + G + R
Sbjct: 286 PKYTSALTYDGVKVMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQR 339
Query: 263 KLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
L Q F GL+G VQFN+ + VI + I ++GYW + F
Sbjct: 340 ALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 388
Score = 41 (19.5 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 370 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 420
>RGD|621531 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA 1"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0001965 "G-protein
alpha-subunit binding" evidence=IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;IDA] [GO:0007268
"synaptic transmission" evidence=ISO] [GO:0007616 "long-term
memory" evidence=ISO;IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO] [GO:0008179 "adenylate cyclase binding" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISO;TAS] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010226
"response to lithium ion" evidence=IEP] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0016020 "membrane" evidence=ISO]
[GO:0019228 "regulation of action potential in neuron"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;ISS]
[GO:0031267 "small GTPase binding" evidence=IPI] [GO:0031489
"myosin V binding" evidence=IPI] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031623 "receptor internalization"
evidence=ISO;IDA] [GO:0031681 "G-protein beta-subunit binding"
evidence=IDA] [GO:0031698 "beta-2 adrenergic receptor binding"
evidence=IPI] [GO:0032279 "asymmetric synapse" evidence=IDA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISO;IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IEP]
[GO:0032590 "dendrite membrane" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=NAS]
[GO:0042220 "response to cocaine" evidence=IEP] [GO:0042493
"response to drug" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=TAS] [GO:0043005 "neuron
projection" evidence=ISO;IDA] [GO:0043025 "neuronal cell body"
evidence=ISO;IDA] [GO:0043197 "dendritic spine" evidence=ISO;IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0044309 "neuron spine"
evidence=ISO;IDA] [GO:0045202 "synapse" evidence=IDA;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045838
"positive regulation of membrane potential" evidence=IMP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0048167 "regulation of synaptic plasticity"
evidence=NAS;IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051018 "protein kinase A binding"
evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEP] [GO:0060076 "excitatory synapse" evidence=IDA]
[GO:0060992 "response to fungicide" evidence=IEP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEP]
[GO:0071359 "cellular response to dsRNA" evidence=IEP] [GO:0071363
"cellular response to growth factor stimulus" evidence=IEP]
[GO:0071375 "cellular response to peptide hormone stimulus"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] [GO:0071418 "cellular response to amine
stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531
GO:GO:0005829 GO:GO:0048167 GO:GO:0042803 GO:GO:0014069
GO:GO:0071363 GO:GO:0005789 GO:GO:0046685 GO:GO:0042493
GO:GO:0032355 GO:GO:0060992 GO:GO:0010226 GO:GO:0042220
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0051602 GO:GO:0031594 GO:GO:0007616 GO:GO:0032279
GO:GO:0035249 GO:GO:0030288 GO:GO:0032281 GO:GO:0031623
GO:GO:0001919 GO:GO:0019228 GO:GO:0008179 GO:GO:0051018
GO:GO:0021510 GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828
GO:GO:0071375 GO:GO:0060076 GO:GO:0071418 GO:GO:0071230
GO:GO:0050806 PDB:2AWW PDBsum:2AWW GO:GO:0031681 GO:GO:0004971
GO:GO:0005234 CTD:2890 HOVERGEN:HBG051839 KO:K05197 EMBL:X17184
EMBL:M36418 EMBL:M38060 IPI:IPI00231012 IPI:IPI00324555 PIR:A40170
PIR:S07059 RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 177 (67.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 434 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 491
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 492 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 551
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 552 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 611
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 612 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 135 (52.6 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 61/250 (24%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 593 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 652
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 653 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 829
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 830 YKSRSESKRM 839
Score = 107 (42.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 64/289 (22%), Positives = 110/289 (38%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKL 89
F+ + + Q+ A+ +ID Y W+ + IY D D G + + L EKN + +
Sbjct: 121 FVLQLRPELQE--ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAEKNWQVTAVNI 177
Query: 90 PLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD-- 147
+ + +L + + R+ VV + I KL+ Y ++ +
Sbjct: 178 ---LTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLG 234
Query: 148 WLSATLESF--SKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGL 203
++ L F S N T +++ +T D+IP + + +W S + V
Sbjct: 235 FMDIDLNKFKESGANVTGFQLVN-------YT-DTIPAR-IMQQWRTSDSRDHTRVDWKR 285
Query: 204 NTY-GLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLR 262
Y YD V +A + + I S D A + G + R
Sbjct: 286 PKYTSALTYDGVKVMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQR 339
Query: 263 KLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
L Q F GL+G VQFN+ + VI + I ++GYW + F
Sbjct: 340 ALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 388
Score = 41 (19.5 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 370 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 420
>UNIPROTKB|P19490 [details] [associations]
symbol:Gria1 "Glutamate receptor 1" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531 GO:GO:0005829
GO:GO:0048167 GO:GO:0042803 GO:GO:0014069 GO:GO:0071363
GO:GO:0005789 GO:GO:0046685 GO:GO:0042493 GO:GO:0032355
GO:GO:0060992 GO:GO:0010226 GO:GO:0042220 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051602
GO:GO:0031594 GO:GO:0007616 GO:GO:0032279 GO:GO:0035249
GO:GO:0030288 GO:GO:0032281 GO:GO:0031623 GO:GO:0001919
GO:GO:0019228 GO:GO:0008179 GO:GO:0051018 GO:GO:0021510
GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828 GO:GO:0071375
GO:GO:0060076 GO:GO:0071418 GO:GO:0071230 GO:GO:0050806 PDB:2AWW
PDBsum:2AWW GO:GO:0031681 GO:GO:0004971 GO:GO:0005234 CTD:2890
HOVERGEN:HBG051839 KO:K05197 EMBL:X17184 EMBL:M36418 EMBL:M38060
IPI:IPI00231012 IPI:IPI00324555 PIR:A40170 PIR:S07059
RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 177 (67.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 54/222 (24%), Positives = 105/222 (47%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 434 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 491
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 492 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 551
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 552 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 611
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 612 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 653
Score = 135 (52.6 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 61/250 (24%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 593 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 652
Query: 579 LITNDWPIGY---QVGSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L I Y + GS + + + + + S P + R +G
Sbjct: 653 L-AKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + L L + G+ Y+L G + A LV L+ C
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGL-AMLVALIEF-C 829
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 830 YKSRSESKRM 839
Score = 107 (42.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 64/289 (22%), Positives = 110/289 (38%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGIS-ALSNMLEKNMAKVSYKL 89
F+ + + Q+ A+ +ID Y W+ + IY D D G + + L EKN + +
Sbjct: 121 FVLQLRPELQE--ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAEKNWQVTAVNI 177
Query: 90 PLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD-- 147
+ + +L + + R+ VV + I KL+ Y ++ +
Sbjct: 178 ---LTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANLG 234
Query: 148 WLSATLESF--SKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRW--SGMQQKGLVSAGL 203
++ L F S N T +++ +T D+IP + + +W S + V
Sbjct: 235 FMDIDLNKFKESGANVTGFQLVN-------YT-DTIPAR-IMQQWRTSDSRDHTRVDWKR 285
Query: 204 NTY-GLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLR 262
Y YD V +A + + I S D A + G + R
Sbjct: 286 PKYTSALTYDGVKVMAEAFQS-LRRQRIDISRRGNAGDCLANPAV-----PWGQGIDIQR 339
Query: 263 KLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
L Q F GL+G VQFN+ + VI + I ++GYW + F
Sbjct: 340 ALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 388
Score = 41 (19.5 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 18/53 (33%), Positives = 22/53 (41%)
Query: 405 ELFGDGLSNPSY---DGLVKMVANDVFDAAVGDIAIVTNRTKIVD--FSQPYI 452
E+ DG+ Y D A D A GD + V NRT IV PY+
Sbjct: 370 EMKHDGIRKIGYWNEDDKFVPAATDA--QAGGDNSSVQNRTYIVTTILEDPYV 420
>UNIPROTKB|I3LMD3 [details] [associations]
symbol:GRIN3B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051924 "regulation of calcium ion transport"
evidence=IEA] [GO:0051205 "protein insertion into membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0035235 GO:GO:0051924
GO:GO:0030288 GO:GO:0051205 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:HLQLDWA
EMBL:FP475994 Ensembl:ENSSSCT00000026993 Uniprot:I3LMD3
Length = 1040
Score = 240 (89.5 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 96/372 (25%), Positives = 162/372 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD--GLSNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + P+D G L + + GLV + AV +I +
Sbjct: 478 GYCIDLLERLAEDTPFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R+++VDFS P+ ST L I+ + + F+ P MW A+ + A+ + + E
Sbjct: 538 RSQVVDFSSPFFSTSLGIMVRSRDTASPIGAFMWPLHWSMWLGVFAALHLTALFLTLYEW 597
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLF-KTNQEATVSS-LGRXXXXXXXXXXXX 551
R + PR R AT+F +S ++ LF +T T GR
Sbjct: 598 R--SPYGLTPRGRNRATVFSYSSALNLCYAILFGRTVSSKTPKCPTGRLLMNLWAIFCLL 655
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRIQKSRLIS 611
+ SSYTA+L++++ + + GI + G++ G+ S S I+KS
Sbjct: 656 VLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPSQGFRFGTVWES--SAEAYIKKS---- 709
Query: 612 LGSPEDYERALRQG-PRNG-GVAAIVDELPYVQLFLSNQT--DFGI----------IGQP 657
PE Y R P GV+ + + P + F+ +++ D+ + +G+P
Sbjct: 710 --FPEMYAHMRRHSAPTTPHGVSMLTSDPPKLNAFIMDKSLLDYEVSIDADCRLLTVGKP 767
Query: 658 FTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLR 717
F G+G ++SPL +S I + +G + LH+KW+ C + +E Q+
Sbjct: 768 FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMG 827
Query: 718 LISFWGLY-LLC 728
+ F GL+ LLC
Sbjct: 828 IYHFSGLFVLLC 839
Score = 51 (23.0 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 257 GTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINI--DKMEIHR---VGYWFDG 308
G FL R L T+F G +G V + +SR + V ++ D + VG W DG
Sbjct: 334 GLFLARFLANTSFQGHTGPVWVTGSSQVHISRRFRVWSLRHDPLGAPAWATVGTWRDG 391
Score = 37 (18.1 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 337 TWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVT-EEH 376
TW G+ E+ G V A P + G P + VT EH
Sbjct: 387 TWRDGRLESETGGVAA--RPPPQPGAPGARPKLRVVTLVEH 425
>UNIPROTKB|F1P0E2 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AADN02005016 EMBL:AADN02005017
EMBL:AADN02005018 IPI:IPI00581692 ProteinModelPortal:F1P0E2
Ensembl:ENSGALT00000027747 Uniprot:F1P0E2
Length = 902
Score = 184 (69.8 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 61/240 (25%), Positives = 111/240 (46%)
Query: 366 ASFVGFVTEEHDSH----KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNPS--- 415
A +V F + HD+ K +GYC+D+ E K + + YK + DG +P
Sbjct: 425 APYVMF-KKNHDTFEGNDKFEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDPETKI 481
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLK 474
++G+V + + AV + I R +++DFS+P++S G+ +++ K + FL
Sbjct: 482 WNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 541
Query: 475 PFTVEMWCVTAASFVMIAVVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLF 520
P E+W +++ ++VV++++ H D GP P + I F
Sbjct: 542 PLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWF 601
Query: 521 SFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
S + + + SL GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 602 SLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 143 (55.4 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 65/262 (24%), Positives = 107/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMKSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + SPL
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRNA 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 768 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 827
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 -AMLVALIEF-CYKSRAEAKRM 847
Score = 99 (39.9 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 63/290 (21%), Positives = 108/290 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N +VS + V+ FN
Sbjct: 141 ALLSLLDHYEWNRFVFLY-DTDRGYSILQAIMEKAGQNSWQVS---AICVENFNDASYRR 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESFSK-- 158
LL + + +V+ + + + Y ++ + + +LE F
Sbjct: 197 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ TP + K + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------STP-MVTK--LMQRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RNLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
VQF+ V+ DV + +VGYW D ++ E G + S
Sbjct: 361 VQFDHYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTLGNDTS 410
>FB|FBgn0031634 [details] [associations]
symbol:Ir25a "Ionotropic receptor 25a" species:7227
"Drosophila melanogaster" [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;ISS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0050907 "detection of
chemical stimulus involved in sensory perception" evidence=IEP]
[GO:0015276 "ligand-gated ion channel activity" evidence=ISM]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0071683
"sensory dendrite" evidence=IDA] [GO:0005929 "cilium" evidence=IDA]
[GO:0007608 "sensory perception of smell" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0016021 GO:GO:0005886 EMBL:AE014134
GO:GO:0030054 GO:GO:0045211 GO:GO:0005929 GO:GO:0035235
GO:GO:0007608 GO:GO:0071683 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 GO:GO:0050907 RefSeq:NP_608863.2
UniGene:Dm.23844 ProteinModelPortal:Q9VR32 SMR:Q9VR32 IntAct:Q9VR32
EnsemblMetazoa:FBtr0289979 GeneID:33683 KEGG:dme:Dmel_CG15627
UCSC:CG15627-RB CTD:33683 FlyBase:FBgn0031634 InParanoid:Q9VR32
OMA:FVMDHKY OrthoDB:EOG46WWQG PhylomeDB:Q9VR32 GenomeRNAi:33683
NextBio:784766 ArrayExpress:Q9VR32 Bgee:Q9VR32 Uniprot:Q9VR32
Length = 934
Score = 186 (70.5 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 63/256 (24%), Positives = 122/256 (47%)
Query: 371 FVTEEHDSHK-VQGYCIDILLEALKLVPYDVPYKFEL----FGDGLSNPSYDGLVKMVAN 425
F+ + + K +GYCID++ E +V +D + E+ FG+ N ++G+VK + +
Sbjct: 438 FIMRDETAPKGYKGYCIDLINEIAAIVHFDYTIQ-EVEDGKFGNMDENGQWNGIVKKLMD 496
Query: 426 DVFDAAVGDIAIVTNRTKIVDFSQPYIS-TGLVIVAPINNHKASAWVFLKPFTVEMW-CV 483
D +G ++++ R ++DF+ PY G+ I+ + +S + FL +W C+
Sbjct: 497 KQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCI 556
Query: 484 TAASFVMIAVVIWILE------HRVN-DDFRGPPRRQ---IATMFLFSFSTLF-KTNQEA 532
AA F + ++WI + ++ N + ++ ++ + F ++L + EA
Sbjct: 557 LAAYF-FTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKECLWFCMTSLTPQGGGEA 615
Query: 533 TVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV-- 590
+ GR I +SYTA+L++ LTV +L T V+ ++ L + I Y
Sbjct: 616 PKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDL-AKQYKILYAPLN 674
Query: 591 GSFAYSYLSDSLRIQK 606
GS A +Y I++
Sbjct: 675 GSSAMTYFERMSNIEQ 690
Score = 95 (38.5 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 32/113 (28%), Positives = 52/113 (46%)
Query: 630 GVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGM 689
G A + D L L+N D ++G+ F+R + A Q+ S L + AIL L
Sbjct: 755 GFAFLGDATDIRYLQLTN-CDLQVVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQ 813
Query: 690 LQKLHEKWFCKEG----C--PEERRQHSEPHQLR---LISFWGLYLLCGTITF 733
L+KL EKW+ + C PE++ + ++ F G+ + C T+ F
Sbjct: 814 LEKLKEKWWKNDEALAKCDKPEDQSDGISIQNIGGVFIVIFVGIGMACITLVF 866
Score = 45 (20.9 bits), Expect = 4.2e-15, Sum P(3) = 4.2e-15
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 214 VWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLK 252
+WA+A ID H + + P +KA V L LK
Sbjct: 14 LWAIADQIDY----HQVFINEVDNEPAAKAVEVVLTYLK 48
>UNIPROTKB|F1LNE4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 IPI:IPI00952011 ProteinModelPortal:F1LNE4
Ensembl:ENSRNOT00000067113 ArrayExpress:F1LNE4 Uniprot:F1LNE4
Length = 756
Score = 174 (66.3 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 312 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 369
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 370 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 429
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 430 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 489
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 490 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 533
Score = 133 (51.9 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 62/250 (24%), Positives = 103/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 473 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 532
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 533 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 591
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 592 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 651
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 652 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 709
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 710 YKSRAEAKRM 719
Score = 96 (38.9 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 34/150 (22%), Positives = 62/150 (41%)
Query: 179 DSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K G +A + YD V + + + + + I S
Sbjct: 140 DSLVSK-FIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 197
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 198 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 252
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 253 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 282
Score = 53 (23.7 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 8 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 44
>UNIPROTKB|F1N947 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 EMBL:AADN02074600
EMBL:AADN02074601 EMBL:AADN02074602 EMBL:AADN02074603
EMBL:AADN02074604 EMBL:AADN02074605 IPI:IPI00682164
Ensembl:ENSGALT00000025069 ArrayExpress:F1N947 Uniprot:F1N947
Length = 667
Score = 216 (81.1 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 91/391 (23%), Positives = 169/391 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD-GL-SNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + + +D G G N + GLV + + AV +I T
Sbjct: 232 GYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGTAHMAVTSFSINTA 291
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R++++DF+ P+ ST L I+ + A F+ P MW + + AV + + E
Sbjct: 292 RSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMWLGIFVALHITAVFLTLYEW 351
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLFKTNQEATVSS----LGRXXXXXXXXXX 549
+ F P+ R +F FS ++ LF + A + GR
Sbjct: 352 K--SPFGMTPKGRNRNKVFSFSSALNVCYAILF--GRTAAIKPPKCWTGRFLMNLWAIFC 407
Query: 550 XXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRI----- 604
S+YTA+L++++ +++ + GI + G++ G+ S D +R
Sbjct: 408 LFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEM 467
Query: 605 -QKSRLISLGSPEDYERALRQGPRNGGVAAIVDE--LPYVQLFLSNQTDFGIIGQPFTRS 661
+ R ++ + D L+ P A I+D+ L Y ++ + +G+PF
Sbjct: 468 HEYMRRYNVPATPDGVAYLKNDPEKLD-AFIMDKALLDY-EVSIDADCKLLTVGKPFAIE 525
Query: 662 GWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISF 721
G+G +SPL +S I + +G + LH+KW+ C + +E Q+ + F
Sbjct: 526 GYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIKHF 585
Query: 722 WGLY-LLCGTITFTAFLVFLLRMVCQYVRYK 751
GL+ +LC F++ +L + +++ Y+
Sbjct: 586 SGLFVMLC-----IGFVLSILTTIGEHIVYR 611
Score = 58 (25.5 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 23/87 (26%), Positives = 39/87 (44%)
Query: 252 KVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVS--RGYDVINIDKMEIH-----RVGY 304
K G F R L T+F GLSG ++ + ++VS + + N+ + R+G
Sbjct: 79 KNITSGQFSNRFLANTSFDGLSGHIKV-KGSSVVSSENNFFIWNLQHDPVGNPMWTRLGS 137
Query: 305 WFDGS---GFSVLPPETLKGKNVSHSQ 328
W +G + + P + + KN H Q
Sbjct: 138 WQEGKIVMDYGIWPEQAQRHKN--HMQ 162
>UNIPROTKB|F8W7L6 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4572
EMBL:AC079233 EMBL:AC112240 IPI:IPI01012058
ProteinModelPortal:F8W7L6 SMR:F8W7L6 Ensembl:ENST00000323661
ArrayExpress:F8W7L6 Bgee:F8W7L6 Uniprot:F8W7L6
Length = 730
Score = 174 (66.3 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 392 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 449
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 450 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 509
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 510 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 569
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 570 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 613
Score = 94 (38.1 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 35/150 (23%), Positives = 61/150 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K A T Y YD V + + + + + I S
Sbjct: 220 DSLVSK-FIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 277
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 278 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 332
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 333 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 362
Score = 53 (23.7 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 88 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 124
>UNIPROTKB|G3V914 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 EMBL:CH473976 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V914 Ensembl:ENSRNOT00000039587 Uniprot:G3V914
Length = 883
Score = 174 (66.3 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 139 (54.0 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 62/250 (24%), Positives = 105/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 778
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 779 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 96 (38.9 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 34/150 (22%), Positives = 62/150 (41%)
Query: 179 DSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K G +A + YD V + + + + + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 325 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 380 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>MGI|MGI:95809 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA2 (alpha 2)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030672 "synaptic vesicle membrane" evidence=ISO]
[GO:0031623 "receptor internalization" evidence=ISO] [GO:0032279
"asymmetric synapse" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IDA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=ISO] [GO:0043198 "dendritic shaft" evidence=ISO]
[GO:0043204 "perikaryon" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045184 "establishment of protein
localization" evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051966
"regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95809 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0032281 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 OrthoDB:EOG4TB49K EMBL:X57498
EMBL:L32204 EMBL:L32189 EMBL:L32190 EMBL:L32192 EMBL:L32194
EMBL:L32196 EMBL:L32198 EMBL:L32200 EMBL:L32202 EMBL:L32203
EMBL:L32201 EMBL:L32199 EMBL:L32197 EMBL:L32195 EMBL:L32193
EMBL:L32191 EMBL:L32372 EMBL:AK014389 EMBL:AK043490 EMBL:AK044574
EMBL:AK046861 IPI:IPI00136967 IPI:IPI00466699 IPI:IPI00608015
IPI:IPI00845711 PIR:I49695 PIR:I49696 RefSeq:NP_001034284.1
RefSeq:NP_001077275.1 RefSeq:NP_038568.2 UniGene:Mm.220224
ProteinModelPortal:P23819 SMR:P23819 IntAct:P23819
MINT:MINT-1776844 STRING:P23819 PhosphoSite:P23819 PaxDb:P23819
PRIDE:P23819 GeneID:14800 KEGG:mmu:14800 UCSC:uc008pnz.1
UCSC:uc008pof.1 BindingDB:P23819 ChEMBL:CHEMBL3205 NextBio:286957
CleanEx:MM_GRIA2 Genevestigator:P23819
GermOnline:ENSMUSG00000033981 Uniprot:P23819
Length = 883
Score = 174 (66.3 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 134 (52.2 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 62/250 (24%), Positives = 103/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 778
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 96 (38.9 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 34/150 (22%), Positives = 62/150 (41%)
Query: 179 DSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K G +A + YD V + + + + + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 325 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 380 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>RGD|61862 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA 2"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA;TAS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;ISO] [GO:0005246 "calcium channel regulator activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=TAS] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IDA;IPI]
[GO:0030425 "dendrite" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030672 "synaptic vesicle membrane" evidence=IDA]
[GO:0031623 "receptor internalization" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=IDA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;ISS] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA;IPI]
[GO:0045184 "establishment of protein localization" evidence=IMP]
[GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051966 "regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069
GO:GO:0051262 GO:GO:0005789 GO:GO:0060992 GO:GO:0010226
GO:GO:0007268 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0042734 GO:GO:0043195
GO:GO:0030672 GO:GO:0032281 GO:GO:0030426 GO:GO:0045184
GO:GO:0031623 GO:GO:0001919 GO:GO:0032839 GO:GO:0030165
InterPro:IPR001828 DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419
EMBL:M38061 EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 174 (66.3 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 134 (52.2 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 62/250 (24%), Positives = 103/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 778
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 96 (38.9 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 34/150 (22%), Positives = 62/150 (41%)
Query: 179 DSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K G +A + YD V + + + + + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 325 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 380 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>UNIPROTKB|P19491 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069 GO:GO:0051262
GO:GO:0005789 GO:GO:0060992 GO:GO:0010226 GO:GO:0007268
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0042734 GO:GO:0043195 GO:GO:0030672
GO:GO:0032281 GO:GO:0030426 GO:GO:0045184 GO:GO:0031623
GO:GO:0001919 GO:GO:0032839 GO:GO:0030165 InterPro:IPR001828
DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419 EMBL:M38061
EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 174 (66.3 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 134 (52.2 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 62/250 (24%), Positives = 103/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 778
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 96 (38.9 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 34/150 (22%), Positives = 62/150 (41%)
Query: 179 DSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K G +A + YD V + + + + + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 325 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 380 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>UNIPROTKB|G3V938 [details] [associations]
symbol:Gria2 "Glutamate receptor, ionotropic, AMPA2,
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
EMBL:CH473976 GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V938 Ensembl:ENSRNOT00000039610 Uniprot:G3V938
Length = 883
Score = 174 (66.3 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 133 (51.9 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 62/250 (24%), Positives = 103/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 778
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 96 (38.9 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 34/150 (22%), Positives = 62/150 (41%)
Query: 179 DSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K G +A + YD V + + + + + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTATIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 325 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 380 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 8.0e-15, Sum P(3) = 8.0e-15
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>UNIPROTKB|O60391 [details] [associations]
symbol:GRIN3B "Glutamate receptor ionotropic, NMDA 3B"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISS;NAS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0005261 "cation channel
activity" evidence=ISS] [GO:0016594 "glycine binding" evidence=ISS]
[GO:0030594 "neurotransmitter receptor activity" evidence=ISS]
[GO:0042165 "neurotransmitter binding" evidence=ISS] [GO:0005262
"calcium channel activity" evidence=ISS] [GO:0043025 "neuronal cell
body" evidence=ISS] [GO:0051205 "protein insertion into membrane"
evidence=ISS] [GO:0051924 "regulation of calcium ion transport"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 DrugBank:DB00142 GO:GO:0030288 GO:GO:0005261
DrugBank:DB00145 GO:GO:0051205 EMBL:AC004528 DrugBank:DB01173
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 EMBL:BK000070 EMBL:BK004079 IPI:IPI00297677
RefSeq:NP_619635.1 UniGene:Hs.660378 ProteinModelPortal:O60391
SMR:O60391 STRING:O60391 PhosphoSite:O60391 PaxDb:O60391
PRIDE:O60391 Ensembl:ENST00000234389 GeneID:116444 KEGG:hsa:116444
UCSC:uc002lqo.1 CTD:116444 GeneCards:GC19P001000 HGNC:HGNC:16768
MIM:606651 neXtProt:NX_O60391 PharmGKB:PA28984 InParanoid:O60391
KO:K05214 OMA:HLQLDWA BindingDB:O60391 ChEMBL:CHEMBL2913
GenomeRNAi:116444 NextBio:79923 Bgee:O60391 CleanEx:HS_GRIN3B
Genevestigator:O60391 GermOnline:ENSG00000116032 Uniprot:O60391
Length = 1043
Score = 228 (85.3 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 89/374 (23%), Positives = 161/374 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD--GLSNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + P+D G L + + GLV + AV +I +
Sbjct: 478 GYCIDLLERLAEDTPFDFELYLVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R+++VDF+ P+ ST L I+ + + F+ P W A+ + A+ + + E
Sbjct: 538 RSQVVDFTSPFFSTSLGIMVRARDTASPIGAFMWPLHWSTWLGVFAALHLTALFLTVYEW 597
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLFK--TNQEATVSSLGRXXXXXXXXXXXX 551
R + PR R +T+F +S ++ LF+ + + GR
Sbjct: 598 R--SPYGLTPRGRNRSTVFSYSSALNLCYAILFRRTVSSKTPKCPTGRLLMNLWAIFCLL 655
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVG----SFAYSYLSDSLRIQKS 607
+ SSYTA+L++++ + + GI + G++ G S A +Y+ S +
Sbjct: 656 VLSSYTANLAAVMVGDKTFEELSGIHDPKLHHPAQGFRFGTVWESSAEAYIKKSFPDMHA 715
Query: 608 RLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQT--DFGI----------IG 655
+ +P PR GVA + + P + F+ +++ D+ + +G
Sbjct: 716 HMRRHSAPTT--------PR--GVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVG 765
Query: 656 QPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQ 715
+PF G+G ++SPL +S I + +G + LH+KW+ C + +E Q
Sbjct: 766 KPFAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQ 825
Query: 716 LRLISFWGLY-LLC 728
+ + F GL+ LLC
Sbjct: 826 MSIYHFAGLFVLLC 839
Score = 49 (22.3 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 22/72 (30%), Positives = 30/72 (41%)
Query: 257 GTFLLRKLLQTNFTGLSGQVQFNQDRNI-VSRGYDVINIDK-----MEIHRVGYWFDGS- 309
G FL R L T+F G +G V + +SR + V ++ + VG W DG
Sbjct: 335 GRFLARFLANTSFQGRTGPVWVTGSSQVHMSRHFKVWSLRRDPRGAPAWATVGSWRDGQL 394
Query: 310 -----GFSVLPP 316
G S PP
Sbjct: 395 DLEPGGASARPP 406
>RGD|2732 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=IDA] [GO:0022843 "voltage-gated cation
channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=ISO] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=IDA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=ISO;IDA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042391 "regulation of membrane
potential" evidence=ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043235 "receptor
complex" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal synaptic
plasticity" evidence=IDA] [GO:0048266 "behavioral response to pain"
evidence=ISO] [GO:0051899 "membrane depolarization" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560
EMBL:M83561 EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402
IPI:IPI00569872 IPI:IPI00951061 IPI:IPI00952320 PIR:S19808
RefSeq:NP_001104584.1 RefSeq:NP_001104587.1 RefSeq:NP_058937.1
UniGene:Rn.10449 PDB:1TXF PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35
PDB:2F36 PDB:2OJT PDB:2PBW PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4
PDB:2WKY PDB:3C31 PDB:3C32 PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36
PDB:3GBA PDB:3GBB PDB:3S2V PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO
PDBsum:1YCJ PDBsum:2F34 PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT
PDBsum:2PBW PDBsum:2QS1 PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4
PDBsum:2WKY PDBsum:3C31 PDBsum:3C32 PDBsum:3C33 PDBsum:3C34
PDBsum:3C35 PDBsum:3C36 PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V
PDBsum:4DLD PDBsum:4E0X ProteinModelPortal:P22756 SMR:P22756
DIP:DIP-29257N STRING:P22756 TCDB:1.A.10.1.5 PhosphoSite:P22756
PRIDE:P22756 GeneID:29559 KEGG:rno:29559 UCSC:RGD:2732
InParanoid:P22756 BindingDB:P22756 ChEMBL:CHEMBL2919
EvolutionaryTrace:P22756 NextBio:609606 ArrayExpress:P22756
Genevestigator:P22756 GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 162 (62.1 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 49/220 (22%), Positives = 101/220 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVP--YDVPYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAV 432
+ + + + YC+D+L E ++ YDV + +G ++G+VK + + D AV
Sbjct: 470 YGNDRFEAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAV 529
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 530 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 589
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 590 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 649
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 650 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Score = 127 (49.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 63/259 (24%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 604 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 663
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 664 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 722
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q+S L+ S E +R L A++ E ++ + IG
Sbjct: 723 FMSSRQQSALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 775
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 776 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 833
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 834 NIGGIFIVLAAGLVLSVFV 852
Score = 116 (45.9 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 66/286 (23%), Positives = 111/286 (38%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ + ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L + K+ + LP N+ D LL K YV+ S
Sbjct: 178 -EDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFYVIFDCS 232
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQH 176
+ I + MMT Y + T D + LE +S +N T R L + H
Sbjct: 233 HETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRKLN--ID-NPH 289
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
SI +K + R + GL+ + T YD V+ VA A
Sbjct: 290 V-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IA 334
Query: 235 SHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQ 280
SH + +Q + K G + + + + GL+G++ FN+
Sbjct: 335 SHRASQLTVSSLQCHRHKPCALGPRFMNLIKEARWDGLTGRITFNK 380
>UNIPROTKB|P22756 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967
GO:GO:0007268 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0030425 GO:GO:0048266 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0032230 GO:GO:0060080
GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828 GO:GO:0048172
GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560 EMBL:M83561
EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402 IPI:IPI00569872
IPI:IPI00951061 IPI:IPI00952320 PIR:S19808 RefSeq:NP_001104584.1
RefSeq:NP_001104587.1 RefSeq:NP_058937.1 UniGene:Rn.10449 PDB:1TXF
PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35 PDB:2F36 PDB:2OJT PDB:2PBW
PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4 PDB:2WKY PDB:3C31 PDB:3C32
PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36 PDB:3GBA PDB:3GBB PDB:3S2V
PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO PDBsum:1YCJ PDBsum:2F34
PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT PDBsum:2PBW PDBsum:2QS1
PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4 PDBsum:2WKY PDBsum:3C31
PDBsum:3C32 PDBsum:3C33 PDBsum:3C34 PDBsum:3C35 PDBsum:3C36
PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V PDBsum:4DLD PDBsum:4E0X
ProteinModelPortal:P22756 SMR:P22756 DIP:DIP-29257N STRING:P22756
TCDB:1.A.10.1.5 PhosphoSite:P22756 PRIDE:P22756 GeneID:29559
KEGG:rno:29559 UCSC:RGD:2732 InParanoid:P22756 BindingDB:P22756
ChEMBL:CHEMBL2919 EvolutionaryTrace:P22756 NextBio:609606
ArrayExpress:P22756 Genevestigator:P22756
GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 162 (62.1 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 49/220 (22%), Positives = 101/220 (45%)
Query: 376 HDSHKVQGYCIDILLEALKLVP--YDVPYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAV 432
+ + + + YC+D+L E ++ YDV + +G ++G+VK + + D AV
Sbjct: 470 YGNDRFEAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAV 529
Query: 433 GDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI 491
+ I R K++DFS+P+++ G+ ++ N + FL P + ++W + + +
Sbjct: 530 APLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV 589
Query: 492 AVVIWILEHRVNDDFRGP----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-R 539
+ V++++ ++ P P + T+ F F L + E +L R
Sbjct: 590 SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTR 649
Query: 540 XXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
I SSYTA+L++ LTV+++ + + + L
Sbjct: 650 IVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Score = 127 (49.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 63/259 (24%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 604 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 663
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 664 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 722
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q+S L+ S E +R L A++ E ++ + IG
Sbjct: 723 FMSSRQQSALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 775
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 776 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 833
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 834 NIGGIFIVLAAGLVLSVFV 852
Score = 116 (45.9 bits), Expect = 9.6e-15, Sum P(2) = 9.6e-15
Identities = 66/286 (23%), Positives = 111/286 (38%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ + ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L + K+ + LP N+ D LL K YV+ S
Sbjct: 178 -EDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFYVIFDCS 232
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQH 176
+ I + MMT Y + T D + LE +S +N T R L + H
Sbjct: 233 HETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRKLN--ID-NPH 289
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
SI +K + R + GL+ + T YD V+ VA A
Sbjct: 290 V-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IA 334
Query: 235 SHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQ 280
SH + +Q + K G + + + + GL+G++ FN+
Sbjct: 335 SHRASQLTVSSLQCHRHKPCALGPRFMNLIKEARWDGLTGRITFNK 380
>UNIPROTKB|Q38PU7 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
EMBL:DQ159930 ProteinModelPortal:Q38PU7 SMR:Q38PU7 Uniprot:Q38PU7
Length = 883
Score = 175 (66.7 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 135 (52.6 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 62/250 (24%), Positives = 103/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 778
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 94 (38.1 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 35/150 (23%), Positives = 61/150 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K A T Y YD V + + + + + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 325 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 380 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>UNIPROTKB|Q5R4M0 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9601 "Pongo
abelii" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 EMBL:CR861226
UniGene:Pab.364 ProteinModelPortal:Q5R4M0 SMR:Q5R4M0 PRIDE:Q5R4M0
InParanoid:Q5R4M0 Uniprot:Q5R4M0
Length = 883
Score = 173 (66.0 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIAGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLYPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 141 (54.7 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 62/250 (24%), Positives = 105/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGTPVNLAVLKLSEQG 778
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 779 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 96 (38.9 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 36/149 (24%), Positives = 61/149 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFIN--EHNITFSASH 236
DS+ K F+ RWS +++K A T + T +AV + F N + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTTTIKYTSALTYYAVQVMTEAFRNLRKQRIEISRRG 325
Query: 237 ELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK 296
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 326 NAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELKT 380
Query: 297 MEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 381 NGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>UNIPROTKB|A8MT92 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0032279
GO:GO:0042734 GO:GO:0043195 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HGNC:HGNC:4572 OrthoDB:EOG4TB49K EMBL:AC079233 EMBL:AC112240
IPI:IPI00789563 SMR:A8MT92 STRING:A8MT92 Ensembl:ENST00000393815
Ensembl:ENST00000449365 Ensembl:ENST00000507898 UCSC:uc011cit.2
Uniprot:A8MT92
Length = 836
Score = 174 (66.3 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 392 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 449
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 450 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 509
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 510 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 569
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 570 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 613
Score = 139 (54.0 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 62/250 (24%), Positives = 105/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 553 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 612
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 613 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 671
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 672 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 731
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 732 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 789
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 790 YKSRAEAKRM 799
Score = 94 (38.1 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 35/150 (23%), Positives = 61/150 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K A T Y YD V + + + + + I S
Sbjct: 220 DSLVSK-FIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 277
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 278 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 332
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 333 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 362
Score = 53 (23.7 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 88 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 124
>ZFIN|ZDB-GENE-061207-27 [details] [associations]
symbol:grin2bb "glutamate receptor, ionotropic,
N-methyl D-aspartate 2B, genome duplicate b" species:7955 "Danio
rerio" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-061207-27 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX537268 EMBL:BX901927
EMBL:BX901961 IPI:IPI00508048 ProteinModelPortal:F1RDX3
Ensembl:ENSDART00000092613 Bgee:F1RDX3 Uniprot:F1RDX3
Length = 1770
Score = 185 (70.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 103/419 (24%), Positives = 178/419 (42%)
Query: 197 GLVSAGLNT--YGLYAY--DTVWAVARSIDKFINE---HNITFSASHELPDSKATRVQLE 249
GL+S + YGL A D V +A + + + H + S H PD K ++
Sbjct: 350 GLISVSYDEWDYGLEARVRDAVAIIAMATSTMMLDRGPHTLLKSGCHGAPDKKGSKS--- 406
Query: 250 QLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDG 308
+LR L+ F G + + F++D + +I ++K + RVG W +G
Sbjct: 407 -----GNPNEVLRYLMNVTFEGRN--LSFSEDGFQMHPKLVIILLNKERQYERVGKWENG 459
Query: 309 S---GFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RI 360
S + V P L + + D L +T E P +VI ++ PL R
Sbjct: 460 SLAMKYHVWPRFELYSD--AEEREDDHLSIVTLE----EAP--FVIVEDVDPLSGTCMRN 511
Query: 361 GVPRRASF-VGFVTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS---- 412
VP R + +T + + K +G+CIDIL + K V + Y L +G
Sbjct: 512 TVPCRKQLKLQNLTGDSGIYIKRCCKGFCIDILKKIAKSVKFT--YDLYLVTNGKHGKKI 569
Query: 413 NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVF 472
N +++G+V V AVG + I R++++DFS P+I TG+ ++ +N S F
Sbjct: 570 NGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAF 629
Query: 473 LKPFTVEMWCVTAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSF 522
L+PF+ ++W + +++ AV +++ E+ R D R P P I +
Sbjct: 630 LEPFSADVWVMMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLW 689
Query: 523 STLFKT-----NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
+F N + T S + +SYTA+L++ + ++ V G+
Sbjct: 690 GLVFNNSVPVQNPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGL 745
Score = 87 (35.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 38/197 (19%), Positives = 83/197 (42%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLSDSLRIQKSRLI 610
+SYTA+L++ + ++ V G+ ND+ ++ G+ ++R +
Sbjct: 723 ASYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVPNGSTERNIRNNYKEMH 782
Query: 611 SLGSP---EDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGW 663
S + ++ AL ++G + A + + + ++ G F +G+
Sbjct: 783 SYMTSFHQKNVNEALHS-LKSGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGY 841
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G A Q+DS + AIL+L +G +++L W C E+ + QL + + G
Sbjct: 842 GIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS-QLDVDNMAG 899
Query: 724 LYLLCGTITFTAFLVFL 740
++ + G + + F+
Sbjct: 900 VFYMLGAAMALSLITFI 916
Score = 60 (26.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 22/138 (15%), Positives = 58/138 (42%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y ++ ++ + + ++ + ++
Sbjct: 217 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGH--QDFVNRIRSTVDNSFVGWELE 274
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT 146
L L + + D + + N K L V +++ + + IF A + + Y W+
Sbjct: 275 EVLLLDMSVDDGD-SKIQNQMKKLQSPVILLYCTKEEATTIFEVAHSVGLTGYGYTWIVP 333
Query: 147 DWLSATLESFSKMNQTSL 164
++ ++ + T L
Sbjct: 334 SLVAGDTDNVPNVFPTGL 351
Score = 50 (22.7 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 19/54 (35%), Positives = 23/54 (42%)
Query: 611 SLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII-GQPFTRSGW 663
SLGS E GGVA I P L N+ F +I G P T+S +
Sbjct: 1091 SLGSASSLEGGYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLIAGHP-TQSSF 1143
>UNIPROTKB|F1PE26 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:HAVPYVS EMBL:AAEX03010079
Ensembl:ENSCAFT00000013743 Uniprot:F1PE26
Length = 842
Score = 174 (66.3 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 373 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 430
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 431 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 490
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 491 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 550
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 551 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 594
Score = 139 (54.0 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 62/250 (24%), Positives = 105/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 534 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 593
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 594 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 652
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 653 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 712
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 713 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 770
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 771 YKSRAEAKRM 780
Score = 94 (38.1 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 35/150 (23%), Positives = 61/150 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K A T Y YD V + + + + + I S
Sbjct: 201 DSLVSK-FIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 258
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 259 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 313
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 314 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 343
Score = 53 (23.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 69 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 105
>UNIPROTKB|I3LHM1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:CU915394 EMBL:FP325266 Ensembl:ENSSSCT00000022356
Uniprot:I3LHM1
Length = 854
Score = 174 (66.3 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 392 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 449
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 450 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 509
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 510 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 569
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 570 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 613
Score = 133 (51.9 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 62/250 (24%), Positives = 103/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 553 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 612
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 613 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 671
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 672 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 731
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 732 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 789
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 790 YKSRAEAKRM 799
Score = 94 (38.1 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 35/150 (23%), Positives = 61/150 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K A T Y YD V + + + + + I S
Sbjct: 220 DSLVSK-FIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 277
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 278 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 332
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 333 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 362
Score = 53 (23.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 88 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 124
>UNIPROTKB|F1MK58 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00705733
ProteinModelPortal:F1MK58 Ensembl:ENSBTAT00000006271 Uniprot:F1MK58
Length = 883
Score = 174 (66.3 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 139 (54.0 bits), Expect = 7.1e-11, Sum P(3) = 7.1e-11
Identities = 62/250 (24%), Positives = 105/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 778
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 779 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 94 (38.1 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 35/150 (23%), Positives = 61/150 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K A T Y YD V + + + + + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 325 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 380 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>UNIPROTKB|F1MBY1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00908138
Ensembl:ENSBTAT00000056038 Uniprot:F1MBY1
Length = 883
Score = 174 (66.3 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 133 (51.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 62/250 (24%), Positives = 103/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 778
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 94 (38.1 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 35/150 (23%), Positives = 61/150 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K A T Y YD V + + + + + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 325 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 380 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>UNIPROTKB|P42262 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0007165
"signal transduction" evidence=TAS] [GO:0008066 "glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0005789
GO:GO:0060992 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0042734
GO:GO:0043195 DrugBank:DB00142 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:L20814 EMBL:BC010574
IPI:IPI00030882 IPI:IPI00219216 IPI:IPI00871510 PIR:I58181
RefSeq:NP_000817.2 RefSeq:NP_001077088.1 RefSeq:NP_001077089.1
UniGene:Hs.32763 PDB:2WJW PDB:2WJX PDB:2XHD PDB:3R7X PDB:3RN8
PDB:3RNN PDB:3UA8 PDBsum:2WJW PDBsum:2WJX PDBsum:2XHD PDBsum:3R7X
PDBsum:3RN8 PDBsum:3RNN PDBsum:3UA8 ProteinModelPortal:P42262
SMR:P42262 DIP:DIP-42852N IntAct:P42262 MINT:MINT-2791741
STRING:P42262 PhosphoSite:P42262 DMDM:23831146 PaxDb:P42262
PRIDE:P42262 Ensembl:ENST00000264426 Ensembl:ENST00000296526
GeneID:2891 KEGG:hsa:2891 UCSC:uc003ipm.4 CTD:2891
GeneCards:GC04P158141 HGNC:HGNC:4572 HPA:CAB006830 HPA:CAB007812
HPA:CAB012981 HPA:HPA008441 MIM:138247 neXtProt:NX_P42262
PharmGKB:PA28967 KO:K05198 OMA:HAVPYVS OrthoDB:EOG4TB49K
BindingDB:P42262 ChEMBL:CHEMBL4016 EvolutionaryTrace:P42262
GenomeRNAi:2891 NextBio:11429 ArrayExpress:P42262 Bgee:P42262
CleanEx:HS_GRIA2 Genevestigator:P42262 GermOnline:ENSG00000120251
Uniprot:P42262
Length = 883
Score = 174 (66.3 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAA 431
+ + +GYC+D+ E K + YK + GDG ++G+V + D A
Sbjct: 439 NERYEGYCVDLAAEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIA 496
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
+ + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 497 IAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIG 556
Query: 491 IAVVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSS 536
++VV++++ H +D R + F FS + + + S
Sbjct: 557 VSVVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRS 616
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 617 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 133 (51.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 62/250 (24%), Positives = 103/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 778
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 94 (38.1 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 35/150 (23%), Positives = 61/150 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
DS+ K F+ RWS +++K A T Y YD V + + + + + I S
Sbjct: 267 DSLVSK-FIERWSTLEEKEYPGAHTTTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GLSG ++F+Q+ ++ +++ +
Sbjct: 325 GNAGDCLANPAV-----PWGQGVEIERALKQVQVEGLSGNIKFDQNGKRINYTINIMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLPPETLKGKNVS 325
++GYW + V E G + S
Sbjct: 380 TNGPRKIGYWSEVDKMVVTLTELPSGNDTS 409
Score = 53 (23.7 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
A+ LI++Y W + +Y D D G + + A L + EK
Sbjct: 135 ALLSLIEYYQWDKFAYLY-DSDRGLSTLQAVLDSAAEK 171
>UNIPROTKB|F1N946 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0016358 "dendrite development"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0045471
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0043005 GO:GO:0030288 GO:GO:0017146
GO:GO:0005234 GO:GO:0016594 GeneTree:ENSGT00700000104113
OMA:QSQGEMM GO:GO:0004972 EMBL:AADN02074600 EMBL:AADN02074601
EMBL:AADN02074602 EMBL:AADN02074603 EMBL:AADN02074604
EMBL:AADN02074605 IPI:IPI00813775 Ensembl:ENSGALT00000025070
ArrayExpress:F1N946 Uniprot:F1N946
Length = 990
Score = 216 (81.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 91/391 (23%), Positives = 169/391 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD-GL-SNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + + +D G G N + GLV + + AV +I T
Sbjct: 455 GYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGTAHMAVTSFSINTA 514
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R++++DF+ P+ ST L I+ + A F+ P MW + + AV + + E
Sbjct: 515 RSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMWLGIFVALHITAVFLTLYEW 574
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLFKTNQEATVSS----LGRXXXXXXXXXX 549
+ F P+ R +F FS ++ LF + A + GR
Sbjct: 575 K--SPFGMTPKGRNRNKVFSFSSALNVCYAILF--GRTAAIKPPKCWTGRFLMNLWAIFC 630
Query: 550 XXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRI----- 604
S+YTA+L++++ +++ + GI + G++ G+ S D +R
Sbjct: 631 LFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEM 690
Query: 605 -QKSRLISLGSPEDYERALRQGPRNGGVAAIVDE--LPYVQLFLSNQTDFGIIGQPFTRS 661
+ R ++ + D L+ P A I+D+ L Y ++ + +G+PF
Sbjct: 691 HEYMRRYNVPATPDGVAYLKNDPEKLD-AFIMDKALLDY-EVSIDADCKLLTVGKPFAIE 748
Query: 662 GWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISF 721
G+G +SPL +S I + +G + LH+KW+ C + +E Q+ + F
Sbjct: 749 GYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIKHF 808
Query: 722 WGLY-LLCGTITFTAFLVFLLRMVCQYVRYK 751
GL+ +LC F++ +L + +++ Y+
Sbjct: 809 SGLFVMLC-----IGFVLSILTTIGEHIVYR 834
Score = 59 (25.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 252 KVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVS--RGYDVINIDKMEIH-----RVGY 304
K G +L + L T+F GLSG ++ + ++VS + + N+ + R+G
Sbjct: 302 KNITSGQYLSKFLANTSFDGLSGHIKV-KGSSVVSSENNFFIWNLQHDPVGNPMWTRLGS 360
Query: 305 WFDGS---GFSVLPPETLKGKNVSHSQ 328
W +G + + P + + KN H Q
Sbjct: 361 WQEGKIVMDYGIWPEQAQRHKN--HMQ 385
>RGD|621704 [details] [associations]
symbol:Grin3a "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3A" species:10116 "Rattus norvegicus"
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IDA;TAS] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IDA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006816 "calcium
ion transport" evidence=ISO;IDA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016358
"dendrite development" evidence=IEA;ISO] [GO:0016594 "glycine
binding" evidence=ISO;IDA] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IDA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0034220 "ion transmembrane
transport" evidence=ISO] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IDA] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IEA;ISO] [GO:0045202
"synapse" evidence=ISO] [GO:0045211 "postsynaptic membrane"
evidence=ISO;IDA] [GO:0045471 "response to ethanol"
evidence=IEA;ISO] [GO:0048511 "rhythmic process" evidence=IDA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IDA]
[GO:0060134 "prepulse inhibition" evidence=IEA;ISO] [GO:0070588
"calcium ion transmembrane transport" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621704 GO:GO:0014069
GO:GO:0045471 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0016358 GO:GO:0060134 GO:GO:0048511
GO:GO:0030288 GO:GO:0006816 GO:GO:0051721 InterPro:IPR001828
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 CTD:116443 eggNOG:NOG320645
HOGENOM:HOG000231528 HOVERGEN:HBG052634 KO:K05213 OMA:QSQGEMM
OrthoDB:EOG480HW2 GO:GO:0004972 EMBL:L34938 EMBL:U29873
EMBL:AF073379 EMBL:AF061945 IPI:IPI00207422 IPI:IPI00464475
PIR:T31068 RefSeq:NP_001185512.1 RefSeq:NP_612555.1
UniGene:Rn.180226 PDB:2RC7 PDB:2RC8 PDB:2RC9 PDBsum:2RC7
PDBsum:2RC8 PDBsum:2RC9 ProteinModelPortal:Q9R1M7 SMR:Q9R1M7
IntAct:Q9R1M7 STRING:Q9R1M7 PRIDE:Q9R1M7 Ensembl:ENSRNOT00000007957
GeneID:191573 KEGG:rno:191573 UCSC:RGD:621704 InParanoid:Q9R1M7
BindingDB:Q9R1M7 ChEMBL:CHEMBL342 EvolutionaryTrace:Q9R1M7
NextBio:622654 Genevestigator:Q9R1M7 GermOnline:ENSRNOG00000005723
Uniprot:Q9R1M7
Length = 1135
Score = 217 (81.4 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 88/368 (23%), Positives = 160/368 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD-GL-SNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + + +D G G N + GLV + + + AV +I T
Sbjct: 578 GYCIDLLEQLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGTANMAVTSFSINTA 637
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R++++DF+ P+ ST L I+ + A F+ P MW + + A+ + + E
Sbjct: 638 RSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMWLGIFVALHITAIFLTLYEW 697
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLFKTNQEATVSS----LGRXXXXXXXXXX 549
+ F P+ R +F FS ++ LF + A + GR
Sbjct: 698 K--SPFGMTPKGRNRNKVFSFSSALNVCYALLF--GRTAAIKPPKCWTGRFLMNLWAIFC 753
Query: 550 XXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRI----- 604
S+YTA+L++++ +++ + GI + G++ G+ S D +R
Sbjct: 754 MFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEM 813
Query: 605 -QKSRLISLGSPEDYERALRQGPRNGGVAAIVDE--LPYVQLFLSNQTDFGIIGQPFTRS 661
+ R ++ + D + L+ P A I+D+ L Y ++ + +G+PF
Sbjct: 814 HEYMRRYNVPATPDGVQYLKNDPEKLD-AFIMDKALLDY-EVSIDADCKLLTVGKPFAIE 871
Query: 662 GWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISF 721
G+G +SPL +S I + +G + LH+KW+ C + +E Q+ + F
Sbjct: 872 GYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIKHF 931
Query: 722 WGLY-LLC 728
GL+ LLC
Sbjct: 932 SGLFVLLC 939
Score = 57 (25.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 197 GLVSAGLNTYGLYAY---DTVWAVARSIDK--FINEHNITFSASHELPDSKATRVQLEQL 251
GL++ G T ++ Y D + VAR++ I ++ D K T +
Sbjct: 373 GLIAHGKTTQSVFEYYVQDAMELVARAVATATMIQPELALLPSTMNCMDVKTTNLT---- 428
Query: 252 KVFDGGTFLLRKLLQTNFTGLSGQVQ 277
G +L R L T F GLSG ++
Sbjct: 429 ----SGQYLSRFLANTTFRGLSGSIK 450
>TIGR_CMR|SPO_3335 [details] [associations]
symbol:SPO_3335 "glutamine ABC transporter, periplasmic
glutamine-binding protein" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0006868 "glutamine transport" evidence=ISS] [GO:0015186
"L-glutamine transmembrane transporter activity" evidence=ISS]
[GO:0016597 "amino acid binding" evidence=ISS] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00062 GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0035235 GO:GO:0030288 GO:GO:0005234 GO:GO:0004970 KO:K02030
RefSeq:YP_168531.1 ProteinModelPortal:Q5LN77 GeneID:3194025
KEGG:sil:SPO3335 PATRIC:23380121 HOGENOM:HOG000123673 OMA:LIWLAER
ProtClustDB:CLSK751639 Uniprot:Q5LN77
Length = 361
Score = 212 (79.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 70/290 (24%), Positives = 129/290 (44%)
Query: 416 YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKP 475
+ ++ V + D A+ +I+I R +DFSQP +GL I+ P + S+ +
Sbjct: 79 FSDMLAAVMDGEADMAIANISITAARETEMDFSQPIFESGLQILVPAETNAGSS-LLRAL 137
Query: 476 FTVEMWCVTAASFVMI---AVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEA 532
+ +++ A+FV++ +++W E R F F ++ + + E
Sbjct: 138 LSRDLFLAIGAAFVILLTGGMLMWYFERRAQPYFDRKLHEAWFPSFWWALNLVVNGGFEE 197
Query: 533 TV--SSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV 590
V ++ GR + S +TA ++S++TV+ +S SV + L + +G
Sbjct: 198 RVPRTAFGRLFGVLLVISSLFVVSVFTARITSVMTVEAISGSVNSVNDLYGQE--VGTID 255
Query: 591 GSFAYSYLSDSLRIQKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTD 650
GS A +L+ R I + D + + R G + AIV + P + + S+Q
Sbjct: 256 GSTAAGFLT-------RRDIDFAAFSDLQEMITAFER-GALDAIVFDAPILSYYASHQGK 307
Query: 651 FGII--GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWF 698
+ G F R +G AF S ++ A+L L E+G ++L+ KWF
Sbjct: 308 GKAVTTGAIFLRENYGIAFPTGSARVEEVNQALLALREDGTYEELYRKWF 357
>RGD|621705 [details] [associations]
symbol:Grin3b "glutamate receptor, ionotropic,
N-methyl-D-aspartate 3B" species:10116 "Rattus norvegicus"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030594 "neurotransmitter receptor
activity" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=IDA] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051205 "protein insertion into membrane" evidence=ISO]
[GO:0051924 "regulation of calcium ion transport" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 RGD:621705 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 GO:GO:0030288 GO:GO:0005261 GO:GO:0051205
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 OrthoDB:EOG480HW2 CTD:116444 KO:K05214
EMBL:AF440691 IPI:IPI00207177 RefSeq:NP_579842.2 UniGene:Rn.162906
PDB:2RCA PDB:2RCB PDBsum:2RCA PDBsum:2RCB ProteinModelPortal:Q8VHN2
SMR:Q8VHN2 STRING:Q8VHN2 PRIDE:Q8VHN2 GeneID:170796 KEGG:rno:170796
UCSC:RGD:621705 BindingDB:Q8VHN2 ChEMBL:CHEMBL282
EvolutionaryTrace:Q8VHN2 NextBio:621215 ArrayExpress:Q8VHN2
Genevestigator:Q8VHN2 GermOnline:ENSRNOG00000012562 Uniprot:Q8VHN2
Length = 1002
Score = 221 (82.9 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 90/372 (24%), Positives = 159/372 (42%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD--GLSNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + +D G L + + GLV + AV +I +
Sbjct: 478 GYCIDLLERLAEDLAFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R+++VDF+ P+ ST L I+ + + F+ P MW A+ + A+ + + E
Sbjct: 538 RSQVVDFTSPFFSTSLGIMVRTRDTASPIGAFMWPLHWSMWVGVFAALHLTALFLTLYEW 597
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLF-KTNQEATVSS-LGRXXXXXXXXXXXX 551
R + PR R T+F +S ++ LF +T T GR
Sbjct: 598 R--SPYGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCLL 655
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRIQKSRLIS 611
+ SSYTA+L++++ + + GI +D + + F + + +S I
Sbjct: 656 VLSSYTANLAAVMVGDKTFEELSGI-----HDPKLHHPSQGFRFGTVWES---SAEAYIK 707
Query: 612 LGSPEDYERALRQG-PRNG-GVAAIVDELPYVQLFLSNQT--DFGI----------IGQP 657
PE + R P GVA + + P + F+ +++ D+ + +G+P
Sbjct: 708 ASFPEMHAHMRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKP 767
Query: 658 FTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLR 717
F G+G ++SPL +S I + +G + LH+KW+ C + +E Q+
Sbjct: 768 FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMG 827
Query: 718 LISFWGLY-LLC 728
+ F GL+ LLC
Sbjct: 828 VYHFSGLFVLLC 839
>UNIPROTKB|Q8VHN2 [details] [associations]
symbol:Grin3b "Glutamate receptor ionotropic, NMDA 3B"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 RGD:621705 GO:GO:0005262 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0035235
GO:GO:0051924 GO:GO:0030288 GO:GO:0005261 GO:GO:0051205
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 eggNOG:NOG320645 HOGENOM:HOG000231528
HOVERGEN:HBG052634 OrthoDB:EOG480HW2 CTD:116444 KO:K05214
EMBL:AF440691 IPI:IPI00207177 RefSeq:NP_579842.2 UniGene:Rn.162906
PDB:2RCA PDB:2RCB PDBsum:2RCA PDBsum:2RCB ProteinModelPortal:Q8VHN2
SMR:Q8VHN2 STRING:Q8VHN2 PRIDE:Q8VHN2 GeneID:170796 KEGG:rno:170796
UCSC:RGD:621705 BindingDB:Q8VHN2 ChEMBL:CHEMBL282
EvolutionaryTrace:Q8VHN2 NextBio:621215 ArrayExpress:Q8VHN2
Genevestigator:Q8VHN2 GermOnline:ENSRNOG00000012562 Uniprot:Q8VHN2
Length = 1002
Score = 221 (82.9 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 90/372 (24%), Positives = 159/372 (42%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD--GLSNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + +D G L + + GLV + AV +I +
Sbjct: 478 GYCIDLLERLAEDLAFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R+++VDF+ P+ ST L I+ + + F+ P MW A+ + A+ + + E
Sbjct: 538 RSQVVDFTSPFFSTSLGIMVRTRDTASPIGAFMWPLHWSMWVGVFAALHLTALFLTLYEW 597
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLF-KTNQEATVSS-LGRXXXXXXXXXXXX 551
R + PR R T+F +S ++ LF +T T GR
Sbjct: 598 R--SPYGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCLL 655
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRIQKSRLIS 611
+ SSYTA+L++++ + + GI +D + + F + + +S I
Sbjct: 656 VLSSYTANLAAVMVGDKTFEELSGI-----HDPKLHHPSQGFRFGTVWES---SAEAYIK 707
Query: 612 LGSPEDYERALRQG-PRNG-GVAAIVDELPYVQLFLSNQT--DFGI----------IGQP 657
PE + R P GVA + + P + F+ +++ D+ + +G+P
Sbjct: 708 ASFPEMHAHMRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKP 767
Query: 658 FTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLR 717
F G+G ++SPL +S I + +G + LH+KW+ C + +E Q+
Sbjct: 768 FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMG 827
Query: 718 LISFWGLY-LLC 728
+ F GL+ LLC
Sbjct: 828 VYHFSGLFVLLC 839
>UNIPROTKB|Q8TCU5 [details] [associations]
symbol:GRIN3A "Glutamate receptor ionotropic, NMDA 3A"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0016358 "dendrite
development" evidence=IEA] [GO:0042165 "neurotransmitter binding"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045202 "synapse" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISS;IDA] [GO:0045471 "response to ethanol" evidence=IDA]
[GO:0051721 "protein phosphatase 2A binding" evidence=ISS]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0006816
"calcium ion transport" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0014069 GO:GO:0045471 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 DrugBank:DB01161 DrugBank:DB00721
GO:GO:0043025 GO:GO:0016358 GO:GO:0043005 GO:GO:0045202
GO:GO:0060134 DrugBank:DB00142 GO:GO:0048511 GO:GO:0030288
DrugBank:DB00333 DrugBank:DB00514 GO:GO:0006816 DrugBank:DB00392
GO:GO:0051721 EMBL:AL591377 DrugBank:DB00740 DrugBank:DB01043
DrugBank:DB00454 DrugBank:DB01173 DrugBank:DB00949 DrugBank:DB00898
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0016594
DrugBank:DB00659 DrugBank:DB01221 EMBL:AF416558 EMBL:AJ416950
EMBL:AB075853 EMBL:AL356516 EMBL:BC167432 IPI:IPI00455154
RefSeq:NP_597702.2 UniGene:Hs.654783 ProteinModelPortal:Q8TCU5
SMR:Q8TCU5 STRING:Q8TCU5 PhosphoSite:Q8TCU5 DMDM:212276445
PaxDb:Q8TCU5 PRIDE:Q8TCU5 Ensembl:ENST00000361820 GeneID:116443
KEGG:hsa:116443 UCSC:uc004bbp.2 CTD:116443 GeneCards:GC09M104331
H-InvDB:HIX0008248 H-InvDB:HIX0125606 HGNC:HGNC:16767 MIM:606650
neXtProt:NX_Q8TCU5 PharmGKB:PA28983 eggNOG:NOG320645
HOGENOM:HOG000231528 HOVERGEN:HBG052634 InParanoid:Q8TCU5 KO:K05213
OMA:QSQGEMM OrthoDB:EOG480HW2 BindingDB:Q8TCU5 ChEMBL:CHEMBL4787
GenomeRNAi:116443 NextBio:79919 Bgee:Q8TCU5 CleanEx:HS_GRIN3A
Genevestigator:Q8TCU5 GermOnline:ENSG00000198785 GO:GO:0004972
Uniprot:Q8TCU5
Length = 1115
Score = 216 (81.1 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 88/366 (24%), Positives = 155/366 (42%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD-GL-SNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + + +D G G N + GLV + AV +I T
Sbjct: 578 GYCIDLLEKIAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLRGTAHMAVTSFSINTA 637
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R++++DF+ P+ ST L I+ + A F+ P MW + + AV + + E
Sbjct: 638 RSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMWLGIFVALHITAVFLTLYEW 697
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLFKTNQEATVSSL--GRXXXXXXXXXXXX 551
+ F P+ R + +F FS ++ LF GR
Sbjct: 698 K--SPFGLTPKGRNRSKVFSFSSALNICYALLFGRTVAIKPPKCWTGRFLMNLWAIFCMF 755
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRI------Q 605
S+YTA+L++++ +++ + GI + G++ G+ S D +R +
Sbjct: 756 CLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEMHE 815
Query: 606 KSRLISLGSPEDYERALRQGPRNGGVAAIVDE--LPYVQLFLSNQTDFGIIGQPFTRSGW 663
R ++ + D L+ P A I+D+ L Y ++ + +G+PF G+
Sbjct: 816 YMRRYNVPATPDGVEYLKNDPEKLD-AFIMDKALLDY-EVSIDADCKLLTVGKPFAIEGY 873
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G +SPL +S I + +G + LH+KW+ C + +E Q+ + F G
Sbjct: 874 GIGLPPNSPLTANISELISQYKSHGFMDMLHDKWYRVVPCGKRSFAVTETLQMGIKHFSG 933
Query: 724 LY-LLC 728
L+ LLC
Sbjct: 934 LFVLLC 939
Score = 55 (24.4 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 37/150 (24%), Positives = 60/150 (40%)
Query: 197 GLVSAGLNTYGL---YAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKV 253
GL++ G T + Y D + VAR++ L S +++E +
Sbjct: 373 GLIAHGKTTQSVFEHYVQDAMELVARAVATAT-----MIQPELALIPSTMNCMEVETTNL 427
Query: 254 FDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVS--RGYDVINID-----KMEIHRVGYWF 306
G +L R L T F GLSG ++ + IVS + + N+ K R+G W
Sbjct: 428 -TSGQYLSRFLANTTFRGLSGSIRV-KGSTIVSSENNFFIWNLQHDPMGKPMWTRLGSWQ 485
Query: 307 DGS---GFSVLPPETLKGKNVSHSQLDWKL 333
G + + P + + K +H Q KL
Sbjct: 486 GGKIVMDYGIWPEQAQRHK--THFQHPSKL 513
>UNIPROTKB|E2QUL1 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060134 "prepulse inhibition" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016358 "dendrite development" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0045471
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0016358 GO:GO:0035235 GO:GO:0043005 GO:GO:0060134
GO:GO:0030288 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 OMA:QSQGEMM GO:GO:0004972
EMBL:AAEX03008005 Ensembl:ENSCAFT00000004119 NextBio:20850739
Uniprot:E2QUL1
Length = 1112
Score = 214 (80.4 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 88/368 (23%), Positives = 159/368 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD-GL-SNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + + +D G G N + GLV + + AV +I T
Sbjct: 578 GYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGSAHLAVTSFSINTA 637
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R++++DF+ P+ ST L I+ + A F+ P MW + + A+ + + E
Sbjct: 638 RSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMWLGIFVALHITAIFLTLYEW 697
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLFKTNQEATVSS----LGRXXXXXXXXXX 549
+ F P+ R + +F FS ++ LF + A + GR
Sbjct: 698 K--SPFGMTPKGRNRSKVFSFSSALNVCYALLF--GRTAAIKPPKCWTGRFLMNLWAIFC 753
Query: 550 XXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRI----- 604
S+YTA+L++++ +++ + GI + G++ G+ S D +R
Sbjct: 754 MFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEM 813
Query: 605 -QKSRLISLGSPEDYERALRQGPRNGGVAAIVDE--LPYVQLFLSNQTDFGIIGQPFTRS 661
+ R ++ + D L+ P A I+D+ L Y ++ + +G+PF
Sbjct: 814 HEYMRRYNVPATPDGVEYLKNDPEKLD-AFIMDKALLDY-EVSIDADCKLLTVGKPFAIE 871
Query: 662 GWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISF 721
G+G +SPL +S I + +G + LH+KW+ C + +E Q+ + F
Sbjct: 872 GYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIKHF 931
Query: 722 WGLY-LLC 728
GL+ LLC
Sbjct: 932 SGLFVLLC 939
Score = 57 (25.1 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 35/149 (23%), Positives = 58/149 (38%)
Query: 197 GLVSAGLNTYGLYAY---DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKV 253
GL++ G T ++ Y D + VAR++ L S + +E +
Sbjct: 373 GLIAHGKTTQSIFEYYVQDAMELVARAVATAT-----MIQPELALIPSTMNCMDVETANL 427
Query: 254 FDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRG-YDVINID-----KMEIHRVGYWFD 307
G +L R L T F G+SG ++ I S + + N+ K R+G W
Sbjct: 428 -TSGQYLSRFLANTTFRGISGSIRVKGSTIISSENNFFIWNLQHDPMGKPMWTRLGRWQG 486
Query: 308 GS---GFSVLPPETLKGKNVSHSQLDWKL 333
G + + P + + K +H Q KL
Sbjct: 487 GKIVMDYGIWPEQAQRHK--THFQYPSKL 513
Score = 39 (18.8 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 175 QHTPDSIPKKAFLSRWSG 192
QH P P L RW G
Sbjct: 469 QHDPMGKPMWTRLGRWQG 486
>FB|FBgn0039927 [details] [associations]
symbol:CG11155 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0060025 "regulation of synaptic activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0016020 GO:GO:0030054
GO:GO:0045211 GO:GO:0030288 InterPro:IPR001828 EMBL:AE014135
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
FlyBase:FBgn0039927 UniGene:Dm.10449 GeneID:43822
KEGG:dme:Dmel_CG11155 GenomeRNAi:43822 NextBio:836052 EMBL:BT044556
RefSeq:NP_651941.2 RefSeq:NP_726649.2 SMR:Q9V4A0
EnsemblMetazoa:FBtr0089195 EnsemblMetazoa:FBtr0333701
UCSC:CG11155-RA UCSC:CG11155-RC InParanoid:Q9V4A0 OMA:DIPHIEV
Uniprot:Q9V4A0
Length = 910
Score = 162 (62.1 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 54/242 (22%), Positives = 109/242 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGD---GLSNP---SYDGLVKMVANDVFDAAVG 433
+ +G+CID+L V + YK EL D G+ P S++G+V+ + D AV
Sbjct: 451 RFEGFCIDLLKAIATQVGFQ--YKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVA 508
Query: 434 DIAIVTNRTKIVDFSQPYISTGLVIVAPI-NNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R ++DF++P+++ G+ I+ + + + F+ P +E+W A++++++
Sbjct: 509 SMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVS 568
Query: 493 VVIWILEHRVNDDFRGP-P--------RRQ--IATMFLFSFSTLFKTNQEATVSSLG-RX 540
++++ +++ P P Q I+ F F T + + R
Sbjct: 569 FALFVMARFSPYEWKNPHPCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRI 628
Query: 541 XXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYLS 599
I SSYTA+L++ LTV+++ + ++ L + G G ++
Sbjct: 629 VGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFR 688
Query: 600 DS 601
DS
Sbjct: 689 DS 690
Score = 139 (54.0 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 51/199 (25%), Positives = 92/199 (46%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYLSDS-LRI-QKS- 607
I SSYTA+L++ LTV+++ + ++ L + G G ++ DS + I QK
Sbjct: 640 IISSYTANLAAFLTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMW 699
Query: 608 RLISLGSPEDYERALRQGPRN--GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGF 665
R + + + G + G A + E + + + IG G+G
Sbjct: 700 RYMENRKTAVFVKTYEDGIKRVMEGSYAFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGI 759
Query: 666 AFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG--CP-EERRQHSEPHQLRLISFW 722
A + SP +S AIL+L E G++Q L++KW+ G C +++ + S+ + L + +
Sbjct: 760 ATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGVENIG 819
Query: 723 GLY--LLCGTITFTAFLVF 739
G++ LLCG +F
Sbjct: 820 GVFVVLLCGLALAVVVAIF 838
Score = 108 (43.1 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 49/222 (22%), Positives = 95/222 (42%)
Query: 116 VVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKMNQTSLRILQGVV 171
+V +P F + +LQM + Y ++ T D + LE F + +N T+ R++
Sbjct: 225 IVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDFRYNSVNITAFRLVD--- 281
Query: 172 GLRQHTPDSIPKKAFLSRWSGMQQKGLVSAG----LNTYGLYAYDTVWAVARSIDKFINE 227
DS +++ +Q GL + + T +D+V+A A + F+N
Sbjct: 282 ------VDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESALMFDSVYAFANGLH-FLNL 334
Query: 228 HNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR 287
N + + + T Q ++ G L ++ GL+G VQF + R + +
Sbjct: 335 DN---HQNFYIKNLSCTSDQ-----TWNDGISLYNQINAAITDGLTGTVQFVEGRRNIFK 386
Query: 288 GYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQL 329
D++ + + +I +VGYW G ++ P N+++ L
Sbjct: 387 -LDILKLKQEKIQKVGYWHPDDGVNISDPTAFYDSNIANITL 427
Score = 66 (28.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 42/194 (21%), Positives = 81/194 (41%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVL 103
A D++ + W +V IY ++DYG + L + + A++ + P + Q +
Sbjct: 162 AYRDIMVYLNWTKVAIIY-EEDYG---LFNLMHSSTETKAEMYIRQASPDSYRQ-----V 212
Query: 104 LNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLESF--SKM 159
L + +V +P F + +LQM + Y ++ T D + LE F + +
Sbjct: 213 LRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDFRYNSV 272
Query: 160 NQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQKGLVSAG----LNTYGLYAYDTVW 215
N T+ R++ DS +++ +Q GL + + T +D+V+
Sbjct: 273 NITAFRLVD---------VDSKRYLEVINQMQKLQHNGLDTINGSPYIQTESALMFDSVY 323
Query: 216 AVARSIDKFINEHN 229
A A + F+N N
Sbjct: 324 AFANGLH-FLNLDN 336
>FB|FBgn0038837 [details] [associations]
symbol:CG3822 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0015277 HSSP:P19491 OrthoDB:EOG4FQZ6P
EMBL:AY119103 ProteinModelPortal:Q8MS48 SMR:Q8MS48 PaxDb:Q8MS48
PRIDE:Q8MS48 FlyBase:FBgn0038837 InParanoid:Q8MS48
ArrayExpress:Q8MS48 Bgee:Q8MS48 Uniprot:Q8MS48
Length = 853
Score = 217 (81.4 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 154/718 (21%), Positives = 287/718 (39%)
Query: 80 KNMAKVSYKLPLPVQFNQ----HDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQ 135
+ + K P P+ Q D LL K V+ S + + AQ++
Sbjct: 174 QELLKAHGMTPFPITVRQLSDSGDYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIG 233
Query: 136 MMTNNYVWLATDWLSATLESFSKMNQTSLRIL-QGVVGLRQHTPDSIPKKAFLSRWSGMQ 194
MM++ + +L T S L + +N R + G R + + +WS +
Sbjct: 234 MMSDYHSYLVT---SLDLHT---VNLDEFRYGGTNITGFRLINEKIVSD--VVRQWS-ID 284
Query: 195 QKGLV-SAGLNTYG---LYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQ 250
+KGL+ SA L T YD V A+++ H++ S ++ + +
Sbjct: 285 EKGLLRSANLTTVRSETALMYDAVHLFAKAL------HDLDTSQQIDIHP-----ISCDG 333
Query: 251 LKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSG 310
+ G L+ + GL+ ++F+ D++ + I ++G W
Sbjct: 334 QSTWQHGFSLINYMKIVEMKGLTNVIKFDHQGFRADFMLDIVELTPAGIRKIGTWN---- 389
Query: 311 FSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPLR--IGVPRRAS- 367
S LP G N + + K Q I K +T I N +R +P +
Sbjct: 390 -STLPD----GINFTRT-FSQKQQEIE-ANLKNKTLVVTTILSNPYCMRKESAIPLSGND 442
Query: 368 -FVGFVTEE-HDSHKVQGYCIDILLEALKLVPYDVPYKF--ELFGDGLSNPSYDGLVKMV 423
F G+ + H+ K G+ I +LVP D Y +L G+ ++G+++ +
Sbjct: 443 QFEGYAVDLIHEISKSLGFNYKI-----QLVP-DGSYGSLNKLTGE------WNGMIREL 490
Query: 424 ANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIV--APINNHKASAWVFLKPFTVEMW 481
D A+ D+ I R + VDF+ P+++ G+ I+ PI + + FL P ++++W
Sbjct: 491 LEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQ-PPNLFSFLSPLSLDVW 549
Query: 482 CVTAASFVMIAVVIWIL------EHRVNDDFRGPPRRQIATMF---LFSFSTLFKTNQEA 532
A +++ ++V+++IL E D G T+ F+ +L + +
Sbjct: 550 IYMATAYLGVSVLLFILAKFTPYEWPAYTDAHGEKVESQFTLLNCMWFAIGSLMQQGCDF 609
Query: 533 TVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDW-PIGYQV 590
+L R + SSYTA+L++ LTV+++ + ++ E L G
Sbjct: 610 LPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTRIKYGALK 669
Query: 591 GSFAYSYLSDSLRIQKSRLISL---GSPEDYERALRQG----PRNGGVAAIVDELPYVQL 643
G ++ DS R+ S P + + +G + G A + E ++
Sbjct: 670 GGSTAAFFRDSKISTYQRMWSFMESARPSVFTVSNGEGVERVAKGKGSYAFLMESTSIEY 729
Query: 644 FLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFC-KEG 702
+ +G +G A +SP +++ ILKL E G L L KW+ K G
Sbjct: 730 VTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKLHILKTKWWKEKRG 789
Query: 703 ---CP-EERRQHSEPHQLRLISFWGLYL-LCGTITFTAFLVFLLRMVCQYVRYKQQQM 755
C E + S ++L L + G+++ L G + + VC++V +K +++
Sbjct: 790 GGKCRVETSKSSSAANELGLANVGGVFVVLMGGMGVACVIA-----VCEFV-WKSRKV 841
>WB|WBGene00001612 [details] [associations]
symbol:glr-1 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009612
"response to mechanical stimulus" evidence=IMP] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
[GO:0007631 "feeding behavior" evidence=IMP] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISS;IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0016595 "glutamate
binding" evidence=ISS] [GO:0050913 "sensory perception of bitter
taste" evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0014069 "postsynaptic density" evidence=IDA] [GO:0007614
"short-term memory" evidence=IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IDA] [GO:0006972
"hyperosmotic response" evidence=IMP] [GO:0001966 "thigmotaxis"
evidence=IMP] [GO:0032589 "neuron projection membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009612 GO:GO:0007631 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0035249 GO:GO:0006972 GO:GO:0007614
InterPro:IPR001828 GO:GO:0001966 GO:GO:0016595 EMBL:FO080280
GO:GO:0032589 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
KO:K05313 GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 EMBL:U34661
PIR:B88533 PIR:S60225 RefSeq:NP_498887.2 UniGene:Cel.6005
ProteinModelPortal:P34299 SMR:P34299 STRING:P34299 PaxDb:P34299
EnsemblMetazoa:C06E1.4 GeneID:176204 KEGG:cel:CELE_C06E1.4
UCSC:C06E1.4 CTD:176204 WormBase:C06E1.4 HOGENOM:HOG000234372
InParanoid:P34299 OMA:LINIRSA NextBio:891570 GO:GO:0050913
Uniprot:P34299
Length = 962
Score = 213 (80.0 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 65/272 (23%), Positives = 133/272 (48%)
Query: 350 VIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDIL-LEALKLVPYDVPYKFEL-F 407
V+ + P + + R + +TE ++K +G+CID+L L A K+ ++ K
Sbjct: 462 VLTNLVAPF-VMIKRECLEMANLTECQGNNKFEGFCIDLLKLLADKIEEFNYEIKLGTKA 520
Query: 408 GDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHK 466
G ++ S+DG++ + + A V + I R ++VDFS+P+++TG+ +++ + +
Sbjct: 521 GSKQADGSWDGMIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKKPDKQE 580
Query: 467 ASAWVFLKPFTVEMWCVTAASFVMIAVVIWIL------EHRVNDDFRG----PPRRQIAT 516
S + F++P + E+W +++ ++VVI+++ E RV + RG +
Sbjct: 581 FSVFSFMQPLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWRVEETSRGGFTISNDFSVYN 640
Query: 517 MFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKG 575
F+ + + + S+ GR I SSYTA+L++ LT++++ ++
Sbjct: 641 CLWFTLAAFMQQGTDILPRSISGRIASSAWWFFTMIIVSSYTANLAAFLTLEKMQAPIES 700
Query: 576 IESLITNDWPIGYQV---GSFAYSYLSDSLRI 604
+E L I Y + GS A + S++I
Sbjct: 701 VEDLAKQS-KIKYGIQGGGSTASFFKYSSVQI 731
Score = 61 (26.5 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 43/170 (25%), Positives = 70/170 (41%)
Query: 2 ISEVANGLKVPLVSFAA-TDPTLSALQFP-YFIRSTQSDSQQMAAMADLIDFYGWKEVIA 59
I V++ L++PLVS A ++ QF F S + ++ +AD I GW EV+
Sbjct: 110 IRGVSDALEMPLVSLTALSNDDHQQQQFGNLFEVSVRPPISEL--LADFIVHKGWGEVLV 167
Query: 60 IYVDDDYGRNGISALSNMLE---KNMAKVS-YKLPLPV-QFNQH--DITVLLNNSKPLGP 112
+ +D + + +L L K S + LP QF + ++ NN
Sbjct: 168 L-IDPVHASLHLPSLWRHLRTRTNTSVKASMFDLPADEKQFEAYLMQFNMMRNNETN--- 223
Query: 113 RVYVVHVSPDPGLRIFTTAQKLQMMTNNYVW-LAT-DWLSATLESFSKMN 160
R+ + SP ++ + Q NY + LA D+L E F N
Sbjct: 224 RILIDCASPKRLKKLLINIRSAQFNQANYHYVLANYDFLPYDQEMFQNGN 273
Score = 39 (18.8 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 268 NFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
N+ L + Q+ NI G+++IN D E YW
Sbjct: 258 NYDFLPYDQEMFQNGNINISGFNIINKDGRE-----YW 290
Score = 38 (18.4 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 64 DDYGRNGISALSNMLEKNMAKVS 86
D GR GI +S+ LE + ++
Sbjct: 103 DGKGREGIRGVSDALEMPLVSLT 125
>UNIPROTKB|J9P2L9 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
OMA:CTNRSHL EMBL:AAEX03015244 Ensembl:ENSCAFT00000044471
Uniprot:J9P2L9
Length = 1513
Score = 166 (63.5 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 89/348 (25%), Positives = 150/348 (43%)
Query: 264 LLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWFDGS---GFSVLP---P 316
L+ F G + + F++D + +I ++K + RVG W D S + V P P
Sbjct: 367 LINVTFEGRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKSLQMKYYVWPRMCP 424
Query: 317 ETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADNARPL-----RIGVPRRASFVGF 371
ET Q D L +T E P +VI ++ PL R VP + V
Sbjct: 425 ET-------EEQEDDHLSIVTLE----EAP--FVIVESVDPLSGTCMRNTVPCQKRIVSE 471
Query: 372 -VTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFELFGDGLS----NPSYDGLVKMV 423
T+E + K +G+CIDIL + K V + Y L +G N +++G++ V
Sbjct: 472 NKTDEEPGYIKKCCKGFCIDILKKISKSVKFT--YDLYLVTNGKHGKKINGTWNGMIGEV 529
Query: 424 ANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCV 483
AVG + I R+++VDFS P+I TG+ ++ +N S FL+PF+ ++W +
Sbjct: 530 VMKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVM 589
Query: 484 TAASFVMI-AVVIWILEH-------RVNDDFRGP--PRRQIATMFLFSFSTLFKT----- 528
+++ AV +++ E+ R D R P P I + +F
Sbjct: 590 MFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQ 649
Query: 529 NQEATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
N + T S + +SYTA+L++ + ++ V G+
Sbjct: 650 NPKGTTSKI---MVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 694
Score = 96 (38.9 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 42/209 (20%), Positives = 92/209 (44%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLSDSLRIQKSRLI 610
+SYTA+L++ + ++ V G+ ND+ ++ G+ ++R + +
Sbjct: 672 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEMH 731
Query: 611 S-LG--SPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGW 663
+ +G + + AL + G + A + + + ++ G+ F +G+
Sbjct: 732 AYMGKFNQRGVDDALLS-LKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGY 790
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G A Q+DS + AIL+L +G +++L W C E+ + QL + + G
Sbjct: 791 GIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLTGI-CHNEKNEVMSS-QLDIDNMAG 848
Query: 724 LYLLCGTITFTAFLVFLLRMVCQYVRYKQ 752
++ + G A + L+ +C+++ Y Q
Sbjct: 849 VFYMLGA----AMALSLITFICEHLFYWQ 873
Score = 60 (26.2 bits), Expect = 7.8e-14, Sum P(3) = 7.8e-14
Identities = 23/138 (16%), Positives = 58/138 (42%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWK--EVIAIYVDDDYGRNGISALSNMLEKNMA--KVS 86
F + S QQ + M ++++ Y W ++ Y Y ++ ++ + + +E + ++
Sbjct: 143 FFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPG-Y-QDFVNKIRSTIENSFVGWELE 200
Query: 87 YKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLAT 146
L L + + D + + N K L + +++ + + IF A + + Y W+
Sbjct: 201 EVLLLDMSLDDGD-SKIQNQLKKLQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVP 259
Query: 147 DWLSATLESFSKMNQTSL 164
++ ++ T L
Sbjct: 260 SLVAGDTDTVPSEFPTGL 277
>UNIPROTKB|E1BK87 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016358 "dendrite development" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0045471
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0016358 GO:GO:0035235 GO:GO:0043005 GO:GO:0060134
GO:GO:0030288 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 OMA:QSQGEMM GO:GO:0004972
EMBL:DAAA02024314 EMBL:DAAA02024315 EMBL:DAAA02024316
EMBL:DAAA02024317 IPI:IPI00698607 Ensembl:ENSBTAT00000024549
Uniprot:E1BK87
Length = 1137
Score = 206 (77.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 87/368 (23%), Positives = 158/368 (42%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD-GL-SNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + + +D G G N + GLV + + AV +I T
Sbjct: 578 GYCIDLLEKLAEDMNFDFDLYIVGDGKYGAWKNGHWTGLVGDLLSGSAHLAVTSFSINTA 637
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R++++DF+ P+ ST L I+ + A F+ P MW + + A+ + + E
Sbjct: 638 RSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMWLGIFVALHITAIFLTLYEW 697
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLFKTNQEATVSS----LGRXXXXXXXXXX 549
+ F P+ R + +F FS ++ LF + A + GR
Sbjct: 698 K--SPFGMTPKGRNRSKVFSFSSALNVCYALLF--GRTAAIKPPKCWTGRFLMNLWAIFC 753
Query: 550 XXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRI----- 604
S+YTA+L++++ +++ + GI + G++ G+ S D +R
Sbjct: 754 MFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFPEM 813
Query: 605 -QKSRLISLGSPEDYERALRQGPRNGGVAAIVDE--LPYVQLFLSNQTDFGIIGQPFTRS 661
+ R ++ + D L+ P A I+D+ L Y ++ + +G+PF
Sbjct: 814 HEYMRRYNVPATLDGVAYLKNDPEKLD-AFIMDKALLDY-EVSVDADCKLLTVGKPFAIE 871
Query: 662 GWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISF 721
G+G +SP +S I + +G + LH+KW+ C + +E Q+ + F
Sbjct: 872 GYGIGLPPNSPFTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIKHF 931
Query: 722 WGLY-LLC 728
GL+ LLC
Sbjct: 932 SGLFMLLC 939
Score = 62 (26.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 59/254 (23%), Positives = 101/254 (39%)
Query: 95 FNQHDITVLL-NNSK-PLGPRVYV-VHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSA 151
+N D +L NNSK LG + + +++S L F Q L+ + N+ +
Sbjct: 274 WNITDFLLLTQNNSKFHLGSIINITINLSSTEDLLSFLQVQ-LESIKNSTPTMVM--FGC 330
Query: 152 TLESFSKMNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQKGLVSAGLNTYGLYAY 211
+ES ++ + + + + LR DS + R G+ GL++ G T ++ Y
Sbjct: 331 DMESIRRIFEITTQFGVMLPELRWVLGDS--QNVEKLRTEGLPL-GLIAHGKTTQSVFEY 387
Query: 212 ---DTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTN 268
D + VAR++ L S + +E + G +L R L T
Sbjct: 388 YVQDAMELVARAVATAT-----MIQPELALIPSTVNCMDVETANL-TSGQYLSRFLANTT 441
Query: 269 FTGLSGQVQFNQDRNIVSRG-YDVINID-----KMEIHRVGYWFDGS---GFSVLPPETL 319
F GLSG ++ I S + + N+ K R+G W G + + P +
Sbjct: 442 FRGLSGSIKVKGSTIISSENNFFIWNLQNDPMGKPMWTRLGSWQRGKIVMDYGIWPEQAQ 501
Query: 320 KGKNVSHSQLDWKL 333
+ K +H Q KL
Sbjct: 502 RHK--THFQHPSKL 513
>MGI|MGI:2150393 [details] [associations]
symbol:Grin3b "glutamate receptor, ionotropic, NMDA3B"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005261 "cation channel activity" evidence=ISO] [GO:0005262
"calcium channel activity" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IMP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030594 "neurotransmitter
receptor activity" evidence=ISO] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IEA;ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=IMP;IDA] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0051205
"protein insertion into membrane" evidence=IMP] [GO:0051924
"regulation of calcium ion transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:2150393 GO:GO:0030594
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051924
GO:GO:0030288 GO:GO:0005261 GO:GO:0051205 GO:GO:0070588
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
GO:GO:0016594 GeneTree:ENSGT00700000104113 eggNOG:NOG320645
HOGENOM:HOG000231528 HOVERGEN:HBG052634 CTD:116444 KO:K05214
OMA:HLQLDWA EMBL:AF396649 EMBL:AY062435 EMBL:AF373861
IPI:IPI00131433 RefSeq:NP_569722.1 UniGene:Mm.391566
ProteinModelPortal:Q91ZU9 SMR:Q91ZU9 STRING:Q91ZU9
PhosphoSite:Q91ZU9 PRIDE:Q91ZU9 DNASU:170483
Ensembl:ENSMUST00000045085 GeneID:170483 KEGG:mmu:170483
UCSC:uc007gau.1 InParanoid:Q91ZU9 BindingDB:Q91ZU9
ChEMBL:CHEMBL2557 NextBio:370111 Bgee:Q91ZU9 CleanEx:MM_GRIN3B
Genevestigator:Q91ZU9 GermOnline:ENSMUSG00000035745 Uniprot:Q91ZU9
Length = 1003
Score = 215 (80.7 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 89/372 (23%), Positives = 158/372 (42%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGD--GLSNPSYDGLVKMVANDVFDAAVGDIAIVTN 440
GYCID+L + + +D G L + + GLV + AV +I +
Sbjct: 478 GYCIDLLERLAEDLAFDFELYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSA 537
Query: 441 RTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEH 500
R+++VDF+ P+ ST L I+ + + F+ P MW A+ + A+ + + E
Sbjct: 538 RSQVVDFTSPFFSTSLGIMVRTRDTASPIGAFMWPLHWSMWVGVFAALHLTALFLTLYEW 597
Query: 501 RVNDDFRGPPR-RQIATMFLFS------FSTLF-KTNQEATVSS-LGRXXXXXXXXXXXX 551
R + PR R T+F +S ++ LF +T T GR
Sbjct: 598 R--SPYGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRFLMNLWAIFCLL 655
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRIQKSRLIS 611
+ SSYTA+L++++ + + GI +D + + F + + +S I
Sbjct: 656 VLSSYTANLAAVMVGDKTFEELSGI-----HDPKLHHPSQGFRFGTVWES---SAEAYIK 707
Query: 612 LGSPEDYERALRQG-PRNG-GVAAIVDELPYVQLFLSNQT--DFGI----------IGQP 657
PE + R P GVA + + P + F+ +++ D+ + +G+P
Sbjct: 708 ASFPEMHAHMRRHSAPTTPHGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKP 767
Query: 658 FTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLR 717
F G+G ++SPL +S I + +G + LH+KW+ C + +E Q+
Sbjct: 768 FAIEGYGIGLPQNSPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMG 827
Query: 718 LISFWGLY-LLC 728
+ GL+ LLC
Sbjct: 828 VYHLSGLFVLLC 839
>MGI|MGI:95811 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA4 (alpha 4)"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0042995 "cell projection" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050804 "regulation of
synaptic transmission" evidence=ISO] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95811 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0045202 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2893 KO:K05200 OrthoDB:EOG4DBTD0 ChiTaRS:GRIA4
GO:GO:0032983 EMBL:AB022913 EMBL:AB079073 EMBL:BC060697
IPI:IPI00131471 RefSeq:NP_001106651.1 RefSeq:NP_001106652.1
RefSeq:NP_062665.3 UniGene:Mm.209263 ProteinModelPortal:Q9Z2W8
SMR:Q9Z2W8 IntAct:Q9Z2W8 STRING:Q9Z2W8 PhosphoSite:Q9Z2W8
PaxDb:Q9Z2W8 PRIDE:Q9Z2W8 Ensembl:ENSMUST00000063508 GeneID:14802
KEGG:mmu:14802 UCSC:uc009obo.2 InParanoid:Q9Z2W8 BindingDB:Q9Z2W8
ChEMBL:CHEMBL3615 NextBio:286965 Bgee:Q9Z2W8 CleanEx:MM_GRIA4
Genevestigator:Q9Z2W8 GermOnline:ENSMUSG00000025892 Uniprot:Q9Z2W8
Length = 902
Score = 177 (67.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 442 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 500 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 559
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 150 (57.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 66/262 (25%), Positives = 109/262 (41%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRTP 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKLSE G+L KL KW+ +G C P++ + L L + G+ Y+L G +
Sbjct: 768 VNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGL 827
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 -AMLVALIEF-CYKSRAEAKRM 847
Score = 89 (36.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 61/272 (22%), Positives = 101/272 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N VS + V+ FN
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP + K + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------NTP-MVTK--LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RSLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 392
>UNIPROTKB|G3V6W0 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
CTD:2893 KO:K05200 RefSeq:NP_058959.2 UniGene:Rn.10938 GeneID:29629
KEGG:rno:29629 NextBio:609852 ProteinModelPortal:G3V6W0
Ensembl:ENSRNOT00000009514 Uniprot:G3V6W0
Length = 902
Score = 177 (67.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 442 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 500 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 559
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 150 (57.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 66/262 (25%), Positives = 109/262 (41%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRTP 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKLSE G+L KL KW+ +G C P++ + L L + G+ Y+L G +
Sbjct: 768 VNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGL 827
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 -AMLVALIEF-CYKSRAEAKRM 847
Score = 89 (36.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 61/272 (22%), Positives = 101/272 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N VS + V+ FN
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP + K + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------NTP-MVTK--LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RSLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 392
>UNIPROTKB|G3V6W1 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 CTD:2893 KO:K05200 OMA:RIGYWND
RefSeq:NP_001106655.1 UniGene:Rn.10938 GeneID:29629 KEGG:rno:29629
NextBio:609852 ProteinModelPortal:G3V6W1 Ensembl:ENSRNOT00000009542
Uniprot:G3V6W1
Length = 902
Score = 177 (67.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 442 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 500 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 559
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 135 (52.6 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 64/262 (24%), Positives = 106/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNA 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 768 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 827
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 -AMLVALIEF-CYKSRAEAKRM 847
Score = 89 (36.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 61/272 (22%), Positives = 101/272 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N VS + V+ FN
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP + K + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------NTP-MVTK--LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RSLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 392
>RGD|61863 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IMP;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007268 "synaptic
transmission" evidence=IMP;TAS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA;IMP] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050803
"regulation of synapse structure and activity" evidence=TAS]
[GO:0050804 "regulation of synaptic transmission" evidence=IMP]
[GO:0051968 "positive regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069
GO:GO:0060992 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0050803 GO:GO:0043195 GO:GO:0051968 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893
KO:K05200 OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037
EMBL:M38063 EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131
IPI:IPI00231132 PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1
RefSeq:NP_058959.2 UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS
PDB:3FAT PDB:3KEI PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE
PDBsum:3FAS PDBsum:3FAT PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA
ProteinModelPortal:P19493 SMR:P19493 DIP:DIP-41142N MINT:MINT-86166
STRING:P19493 TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493
GeneID:29629 KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493
BindingDB:P19493 ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493
NextBio:609852 ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 177 (67.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 442 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 500 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 559
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 133 (51.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 64/262 (24%), Positives = 105/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ D +G G+G A + S L
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSSLGNA 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 768 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 827
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 -AMLVALIEF-CYKSRAEAKRM 847
Score = 89 (36.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 61/272 (22%), Positives = 101/272 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N VS + V+ FN
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP + K + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------NTP-MVTK--LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RSLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 392
>UNIPROTKB|P19493 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069 GO:GO:0060992
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0050803
GO:GO:0043195 GO:GO:0051968 GO:GO:0032281 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893 KO:K05200
OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037 EMBL:M38063
EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131 IPI:IPI00231132
PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1 RefSeq:NP_058959.2
UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS PDB:3FAT PDB:3KEI
PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE PDBsum:3FAS PDBsum:3FAT
PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA ProteinModelPortal:P19493
SMR:P19493 DIP:DIP-41142N MINT:MINT-86166 STRING:P19493
TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493 GeneID:29629
KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493 BindingDB:P19493
ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493 NextBio:609852
ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 177 (67.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 442 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 500 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 559
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 133 (51.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 64/262 (24%), Positives = 105/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ D +G G+G A + S L
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSSLGNA 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 768 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 827
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 -AMLVALIEF-CYKSRAEAKRM 847
Score = 89 (36.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 61/272 (22%), Positives = 101/272 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N VS + V+ FN
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP + K + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------NTP-MVTK--LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RSLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 392
>ZFIN|ZDB-GENE-020125-3 [details] [associations]
symbol:gria2a "glutamate receptor, ionotropic, AMPA
2a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05198 EMBL:AF525743
IPI:IPI00486705 RefSeq:NP_571969.1 UniGene:Dr.107958
ProteinModelPortal:Q71E63 SMR:Q71E63 PRIDE:Q71E63 GeneID:170450
KEGG:dre:170450 CTD:170450 InParanoid:Q71E63 NextBio:20797091
ArrayExpress:Q71E63 Bgee:Q71E63 Uniprot:Q71E63
Length = 875
Score = 180 (68.4 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 54/224 (24%), Positives = 100/224 (44%)
Query: 377 DSHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDA 430
D+ + +GYC+D+ E K + Y+ + DG ++G+V + D
Sbjct: 431 DNERYEGYCVDLAAEIAKHCGFK--YQLRIVADGKYGARDAETKIWNGMVGELVYGKADI 488
Query: 431 AVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AV + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 489 AVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYI 548
Query: 490 MIAVVIWILE-------H--RVNDDFRGPPRRQ----IATMFLFSFSTLFKTNQEATVSS 536
++VV++++ H D GP I FS + + + S
Sbjct: 549 GVSVVLFLVSRFSPYEWHTEEFEDGQLGPSESTNEFGIFNSLWFSLGAFMRQGCDISPRS 608
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 609 LSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 652
Score = 145 (56.1 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 67/250 (26%), Positives = 107/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 592 FSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 651
Query: 579 LITNDWPIGY---QVGS----FAYSYLS--DSL-RIQKSRLISLGSPEDYERALRQGPRN 628
L I Y GS F S ++ D + + KS S+ E LR
Sbjct: 652 L-AKQTEIAYGTLDAGSTKEFFRRSKIALFDKMWQYMKSAEPSVFVKNTVEGVLRVRKSK 710
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 711 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNAVNLAVLKLNEQG 770
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C + E L L + G+ Y+L G + A LV L+ C
Sbjct: 771 LLDKLKNKWWYDKGECGSGGGESKEKTSALSLSNVAGVFYILVGGLGL-AMLVALVEF-C 828
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 829 YKSRAEAKRM 838
Score = 80 (33.2 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 30/123 (24%), Positives = 50/123 (40%)
Query: 186 FLSRWSGMQQKGLVSAG--LNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKA 243
F RW +++K A + YD V + + +F+++ I S D A
Sbjct: 268 FDQRWEALEEKEYPGADSRIRYTSALTYDAVQVMTEAF-RFLHKQRIDISRRGNNGDCLA 326
Query: 244 T-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRV 302
V Q G + R L Q GL+G +QF+Q V+ +V+ + ++
Sbjct: 327 NPAVPWAQ------GVEIERALKQVRVDGLTGNIQFDQYGRRVNYTVNVMELKNSGPVKI 380
Query: 303 GYW 305
GYW
Sbjct: 381 GYW 383
Score = 50 (22.7 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 14 VSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISA 73
VSF P+ A F+ + D + + L+++Y W++ +Y D D G + + A
Sbjct: 104 VSFIT--PSFPADGLNQFVLQMRPDIK--GPLISLVEYYKWEKFAYLY-DSDRGLSTLQA 158
Query: 74 L 74
+
Sbjct: 159 V 159
>UNIPROTKB|I3L8N9 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AEMK01190335 EMBL:CU855529
EMBL:CU972413 EMBL:FP312660 Ensembl:ENSSSCT00000027751
Uniprot:I3L8N9
Length = 883
Score = 177 (67.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 423 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 480
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 481 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 540
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 541 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 600
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 601 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 642
Score = 135 (52.6 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 64/262 (24%), Positives = 106/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 570 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 629
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 630 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 688
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 689 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNA 748
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 749 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 808
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 809 -AMLVALIEF-CYKSRAEAKRM 828
Score = 88 (36.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 61/272 (22%), Positives = 101/272 (37%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N VS + V+ FN
Sbjct: 122 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 177
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 178 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 237
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP + K + RW + Q+ G + T L YD V
Sbjct: 238 ANVTGFQLVDF------NTP-MVTK--LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 287
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 288 VMAETF-RNLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVQIQGLTGN 341
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 342 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 373
>UNIPROTKB|G3V164 [details] [associations]
symbol:GRIA4 "Glutamate receptor, ionotrophic, AMPA 4,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471065 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 UniGene:Hs.503743
HGNC:HGNC:4574 ChiTaRS:GRIA4 EMBL:AP001023 SMR:G3V164
Ensembl:ENST00000393127 Ensembl:ENST00000525187 Uniprot:G3V164
Length = 884
Score = 177 (67.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 442 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 500 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 559
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 135 (52.6 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 64/262 (24%), Positives = 106/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNA 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 768 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 827
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 -AMLVALIEF-CYKSRAEAKRM 847
Score = 88 (36.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 61/272 (22%), Positives = 100/272 (36%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N VS + V+ FN
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP I + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------NTPMVIK---LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RSLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 392
>UNIPROTKB|P48058 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISS]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISS]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISS]
[GO:0006810 "transport" evidence=TAS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0043195 GO:GO:0051968
DrugBank:DB00142 GO:GO:0032281 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:U16129 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 EMBL:BC045546
EMBL:BC142654 EMBL:BC150209 IPI:IPI00007632 IPI:IPI00791228
RefSeq:NP_000820.3 RefSeq:NP_001070711.2 RefSeq:NP_001070712.1
RefSeq:NP_001106283.1 UniGene:Hs.503743 ProteinModelPortal:P48058
SMR:P48058 MINT:MINT-95403 STRING:P48058 PhosphoSite:P48058
DMDM:218512059 PRIDE:P48058 DNASU:2893 Ensembl:ENST00000282499
Ensembl:ENST00000393125 Ensembl:ENST00000428631
Ensembl:ENST00000530497 GeneID:2893 KEGG:hsa:2893 UCSC:uc001pix.2
CTD:2893 GeneCards:GC11P105514 H-InvDB:HIX0026176 HGNC:HGNC:4574
MIM:138246 neXtProt:NX_P48058 PharmGKB:PA28969 InParanoid:P48058
KO:K05200 OMA:RIGYWND OrthoDB:EOG4DBTD0 PhylomeDB:P48058
BindingDB:P48058 ChEMBL:CHEMBL3190 ChiTaRS:GRIA4 GenomeRNAi:2893
NextBio:11443 ArrayExpress:P48058 Bgee:P48058 CleanEx:HS_GRIA4
Genevestigator:P48058 GO:GO:0032983 Uniprot:P48058
Length = 902
Score = 177 (67.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 442 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 500 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 559
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 150 (57.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 66/262 (25%), Positives = 109/262 (41%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRTP 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITF 733
++ A+LKLSE G+L KL KW+ +G C P++ + L L + G+ Y+L G +
Sbjct: 768 VNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGL 827
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 -AMLVALIEF-CYKSRAEAKRM 847
Score = 88 (36.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 61/272 (22%), Positives = 100/272 (36%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N VS + V+ FN
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP I + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------NTPMVIK---LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RSLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 392
>UNIPROTKB|Q38PU5 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISS] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
GO:GO:0032983 EMBL:DQ159932 ProteinModelPortal:Q38PU5 SMR:Q38PU5
Uniprot:Q38PU5
Length = 902
Score = 177 (67.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 442 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 500 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 559
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 134 (52.2 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 64/262 (24%), Positives = 106/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLGNA 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 768 VNLAVLKLNEPGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 827
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 828 -AMLVALIEF-CYKSRAEAKRM 847
Score = 88 (36.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 61/272 (22%), Positives = 100/272 (36%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G + + A+ +N VS + V+ FN
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTDRGYSILQAIMEKAGQNGWHVS---AICVENFNDVSYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP I + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------NTPMVIK---LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RSLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 392
>UNIPROTKB|E2RIZ6 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:RIGYWND EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023560 Uniprot:E2RIZ6
Length = 854
Score = 177 (67.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 442 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 499
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 500 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 559
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 661
Score = 128 (50.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 53/212 (25%), Positives = 87/212 (41%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 649 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 707
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 708 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRTP 767
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-C-PEE 706
++ A+LKLSE G+L KL KW+ +G C P++
Sbjct: 768 VNLAVLKLSEAGVLDKLKNKWWYDKGECGPKD 799
Score = 86 (35.3 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 61/272 (22%), Positives = 100/272 (36%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQ-FNQHDITV 102
A+ L+D Y W + +Y D D G S L ++EK + + V+ FN
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSILQAIMEKAGQHGWHVSAICVENFNDVSYRQ 196
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATD--WLSATLESF--SK 158
LL + +V+ + I + Y ++ + + +LE F
Sbjct: 197 LLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGG 256
Query: 159 MNQTSLRILQGVVGLRQHTPDSIPKKAFLSRWSGMQQK---GLVSAGLNTYGLYAYDTVW 215
N T +++ +TP + K + RW + Q+ G + T L YD V
Sbjct: 257 ANVTGFQLVDF------NTP-MVTK--LMDRWKKLDQREYPGSETPPKYTSAL-TYDGVL 306
Query: 216 AVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
+A + + + I S D A + G + R L Q GL+G
Sbjct: 307 VMAETF-RNLRRQKIDISRRGNAGDCLANPAA-----PWGQGIDMERTLKQVRIQGLTGN 360
Query: 276 VQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
VQF+ V+ DV + +VGYW D
Sbjct: 361 VQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 392
>UNIPROTKB|F1MCW8 [details] [associations]
symbol:F1MCW8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0042734
GO:GO:0030288 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 GO:GO:0032983 EMBL:DAAA02040526
EMBL:DAAA02040527 IPI:IPI00842735 Ensembl:ENSBTAT00000022788
OMA:FATICRI Uniprot:F1MCW8
Length = 751
Score = 135 (52.6 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 39/165 (23%), Positives = 80/165 (48%)
Query: 429 DAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAAS 487
D AV + I R K++DFS+P+++ G+ I+ ++ + + FL PF+ +W +
Sbjct: 408 DLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLLA 467
Query: 488 FVMIAVVIWILEHRVNDDFRGP-PRRQ-----IATMFLFSFSTLFKTN----QEATVS-- 535
++ ++ V++++ ++ P P Q + + S F Q +T++
Sbjct: 468 YLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPR 527
Query: 536 SLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
+L R I SSYTA+L++ LTVQ++ ++ ++ L
Sbjct: 528 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDL 572
Score = 129 (50.5 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 51/199 (25%), Positives = 86/199 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLRIQKSRL 609
I SSYTA+L++ LTVQ++ ++ ++ L + I Y G + ++ +S R+
Sbjct: 545 IISSYTANLAAFLTVQRMDVPIESVDDL-ADQTAIEYGTIHGGSSMTFFQNSRYQTYQRM 603
Query: 610 ISL---GSPEDYERALRQG-PR--NGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGW 663
+ P + ++ +G R N A ++ E + + + IG G+
Sbjct: 604 WNYMYSKQPSVFVKSTEEGIARVLNSNYAFLL-ESTMNEYYRQRNCNLTQIGGLLDTKGY 662
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWG 723
G S AIL+L EN L+ L KW+ CP+E ++ + I
Sbjct: 663 GIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKEEDHRAKGLGMENIGGIF 722
Query: 724 LYLLCGTIT--FTAFLVFL 740
+ L+CG I F A L FL
Sbjct: 723 VVLICGLIVAIFMAMLEFL 741
Score = 42 (19.8 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 30/155 (19%), Positives = 60/155 (38%)
Query: 1 MISEVANGLKVPLVSFAATDPTLSALQFPYF--IRSTQSDSQQMAAMADLIDFYGWKEVI 58
+IS + +VP F QF F + S++ A+A +++F+
Sbjct: 24 IISNICGEKEVP--HFKVAPEEFIKFQFQRFTTLNLHPSNTDISVAVAGVLNFFNCTTAC 81
Query: 59 AIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH 118
I + N L +L + + L + + + D T LL + ++H
Sbjct: 82 LICAKAECLLN----LEKLLRQFLISKD-TLSVRMLDDARDPTPLLKEIRDDKTATIIIH 136
Query: 119 VSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATL 153
+ I A +L M++ Y ++ T+ L+ +L
Sbjct: 137 ANASMSHTILLKAAELGMVSAYYTYIFTN-LTVSL 170
>UNIPROTKB|F1NY64 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00821646
Ensembl:ENSGALT00000015322 ArrayExpress:F1NY64 Uniprot:F1NY64
Length = 878
Score = 174 (66.3 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 53/222 (23%), Positives = 100/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
+ +GYC+D+ E K + YK + GDG ++G+V + D A+
Sbjct: 436 RYEGYCVDLATEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIA 493
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 494 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 553
Query: 493 VVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSSL- 537
VV++++ H +D R + F FS + + + SL
Sbjct: 554 VVLFLVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 613
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 614 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 655
Score = 139 (54.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 62/250 (24%), Positives = 105/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 595 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 654
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 655 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSK 713
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 714 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 773
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 774 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 831
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 832 YKSRAEAKRM 841
Score = 86 (35.3 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
D + K F+ RWS +++K A +T Y YD V + + + + + I S
Sbjct: 262 DPLVSK-FIQRWSTLEEKEYPGAHTSTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 319
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GL+G ++F+Q+ ++ +V+ +
Sbjct: 320 GNAGDCLANPAV-----PWGHGVEIERALKQVQVEGLTGNIKFDQNGKRINFTINVMELK 374
Query: 296 KMEIHRVGYWFDGSGFSVLP 315
++GYW + V P
Sbjct: 375 STGPRKIGYWSEVDKMVVNP 394
>UNIPROTKB|F1NKF1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00603883
ProteinModelPortal:F1NKF1 Ensembl:ENSGALT00000038841
ArrayExpress:F1NKF1 Uniprot:F1NKF1
Length = 883
Score = 174 (66.3 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 53/222 (23%), Positives = 100/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
+ +GYC+D+ E K + YK + GDG ++G+V + D A+
Sbjct: 441 RYEGYCVDLATEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIA 498
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 499 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 558
Query: 493 VVIWILE-------HRVN-DDFRGPPRRQIATMF------LFSFSTLFKTNQEATVSSL- 537
VV++++ H +D R + F FS + + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 660
Score = 139 (54.0 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 62/250 (24%), Positives = 105/250 (42%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 600 FSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 659
Query: 579 LITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERALRQG-----PRN 628
L + I Y GS + + + + S P + R +G
Sbjct: 660 L-SKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSK 718
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKLSE G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 778
Query: 689 MLQKLHEKWFCKEG-C-PEERRQHSEPHQLRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C ++ + L L + G+ Y+L G + A LV L+ C
Sbjct: 779 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALIEF-C 836
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 837 YKSRAEAKRM 846
Score = 86 (35.3 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 32/140 (22%), Positives = 58/140 (41%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAGLNT--Y-GLYAYDTVWAVARSIDKFINEHNITFSAS 235
D + K F+ RWS +++K A +T Y YD V + + + + + I S
Sbjct: 267 DPLVSK-FIQRWSTLEEKEYPGAHTSTIKYTSALTYDAVQVMTEAF-RNLRKQRIEISRR 324
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A + G + R L Q GL+G ++F+Q+ ++ +V+ +
Sbjct: 325 GNAGDCLANPAV-----PWGHGVEIERALKQVQVEGLTGNIKFDQNGKRINFTINVMELK 379
Query: 296 KMEIHRVGYWFDGSGFSVLP 315
++GYW + V P
Sbjct: 380 STGPRKIGYWSEVDKMVVNP 399
>WB|WBGene00001617 [details] [associations]
symbol:glr-6 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0009792 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HSSP:P19491
EMBL:FO080933 GeneID:180955 KEGG:cel:CELE_F41B4.4 UCSC:F41B4.4a
CTD:180955 NextBio:911722 RefSeq:NP_741822.2
ProteinModelPortal:Q8MXV8 SMR:Q8MXV8 DIP:DIP-24287N
EnsemblMetazoa:F41B4.4a WormBase:F41B4.4a HOGENOM:HOG000019343
InParanoid:Q8MXV8 OMA:IVPRINE ArrayExpress:Q8MXV8 Uniprot:Q8MXV8
Length = 844
Score = 198 (74.8 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 78/368 (21%), Positives = 159/368 (43%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKF---ELFGDGLSNPS-YDGLVKMVANDVFDAAVGDI 435
K +G+C+D+L + +++ ++ K +G+ + +DG++ + D AV I
Sbjct: 433 KHEGFCVDLLDKLAEMLHFNYTLKIVKDNKYGERKNGTDEWDGMIGEILRGDADMAVAPI 492
Query: 436 AIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWV--FLKPFTVEMWCVTAASFVMIAV 493
+ R +++DF+ P++ G+ ++ N K+S+ + FL P + +W +A + V+ A+
Sbjct: 493 TVTATRLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTRFLWPLSASVWTFSAIATVITAL 552
Query: 494 VIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLGRXXXXXXXXXXXXIT 553
++ + + + Q + +L + + R +
Sbjct: 553 LVTVAAVLSPKESTAEFKIQNSVWYLVCILLRAGSGYNCQAGAT-RLISAVWWSFTLVLI 611
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYLSDSLRIQKSRLISL 612
+ YTA+ +++LTV + S E L ++ G +G + S RI+ R +
Sbjct: 612 AQYTANFAALLTVDRKSMPFNSFEELGNQTEYNFGSILGGSTMQFFKYS-RIETFRRL-W 669
Query: 613 GSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGI--------IGQPFTRS-GW 663
+ E + G + GV +++E YV L S D+ + +G S G+
Sbjct: 670 ERMQSAEPSAFVGTNHEGVNRVLNE-KYVFLMESATLDYQVTQNCNLTRVGNVVLGSNGY 728
Query: 664 GFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI---- 719
A + S ++ IL L+E G++ L W+ K ++ Q SEP L+
Sbjct: 729 SIALPKGSKWREKLTRQILDLNEKGIILMLKNNWWKKS---QQECQSSEPEDLQTALGAE 785
Query: 720 SFWGLYLL 727
+ +GL+LL
Sbjct: 786 NVYGLFLL 793
Score = 64 (27.6 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 45 MADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKV-SYKLP---LPVQFNQHDI 100
M LI+ + W + IY + D + I LS LEK+ A + ++ L + D
Sbjct: 140 MERLINLWRWDNFVYIYSNYDAPKQLIETLSR-LEKSPALLRAHTLDDSMMATALALRD- 197
Query: 101 TVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMT--NNYVWLATDWLSATLESFS 157
T N P RV ++ +SP+ L F + KL M++ N ++ A D L+ L ++
Sbjct: 198 TCDRNRCWPKKNRV-LIELSPNETLTFFDASLKLGMISVHNWFLITALDDLNDHLSQYT 255
Score = 40 (19.1 bits), Expect = 6.6e-13, Sum P(3) = 6.6e-13
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 269 FTGLSGQVQFN--QDRNIVSRGYDVINIDKMEIHRVGYW---FDGSGFSVLPPETLKGKN 323
F GL+G++ FN DR+ + I +H G W ++GS + + + G +
Sbjct: 340 FKGLTGKISFNGTSDRSDSELHIWEMGITGAGLH-TGIWKSTWEGSKELTMLAKNIPGTH 398
Query: 324 VSHSQ 328
H Q
Sbjct: 399 -EHYQ 402
Score = 37 (18.1 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 10/49 (20%), Positives = 25/49 (51%)
Query: 131 AQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGVVGLRQHTPD 179
+Q ++ + N + W ++ + ++ ++ +T R+ + LR HT D
Sbjct: 137 SQLMERLINLWRWDNFVYIYSNYDAPKQLIETLSRLEKSPALLRAHTLD 185
>FB|FBgn0039916 [details] [associations]
symbol:CG9935 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0060025 "regulation
of synaptic activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR001828 EMBL:AE014135 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0015277 RefSeq:NP_001036250.1 UniGene:Dm.14094
ProteinModelPortal:Q0KIF2 SMR:Q0KIF2 STRING:Q0KIF2 PRIDE:Q0KIF2
EnsemblMetazoa:FBtr0110906 GeneID:43806 KEGG:dme:Dmel_CG9935
UCSC:CG9935-RB FlyBase:FBgn0039916 OMA:MISQIAN OrthoDB:EOG48CZB3
PhylomeDB:Q0KIF2 GenomeRNAi:43806 NextBio:835962 Bgee:Q0KIF2
Uniprot:Q0KIF2
Length = 899
Score = 161 (61.7 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 47/221 (21%), Positives = 104/221 (47%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGD---GLSNPS---YDGLVKMVANDVFDAA 431
+ + G+C+DIL + V +D Y +L D G +P ++G+V + D A
Sbjct: 427 NERFYGFCVDILETISREVGFD--YILDLVPDRKYGAKDPETGEWNGMVAQLMKYKADLA 484
Query: 432 VGDIAIVTNRTKIVDFSQPYISTGLVIVAPI-NNHKASAWVFLKPFTVEMWCVTAASFVM 490
VG + I R ++DF++P+++ G+ I+ + + + F+ P +E+W ++ +
Sbjct: 485 VGSMTITYARESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLAIEIWIYVLIAYFL 544
Query: 491 IAVVIWI------LEHR-VN----DDFRGPPRRQIATMFLFSFSTLFKTNQEATVSSLG- 538
+++ I+I +E + +N ++ + + F F+ T + + + ++
Sbjct: 545 VSLCIYIVGKLSPIEWKCINACDLENISIGNQFSLTDSFWFTIGTFMQQSPDIYPRAMST 604
Query: 539 RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
R I +SYTA+L++ LT +++ ++ E L
Sbjct: 605 RIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENAEDL 645
Score = 140 (54.3 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 59/238 (24%), Positives = 100/238 (42%)
Query: 518 FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
F F+ T + + + ++ R I +SYTA+L++ LT +++ ++
Sbjct: 583 FWFTIGTFMQQSPDIYPRAMSTRIISSTWGFFSLIIVASYTANLAAFLTTERMINPIENA 642
Query: 577 ESLITNDWPIGYQV---GSFAYSYLSDS-LRIQKS--RLISLGSPEDYERALRQGPR--N 628
E L + I Y GS ++ DS + K R + P + G + N
Sbjct: 643 EDLASQT-EISYGTLDSGS-TMTFFRDSVIETYKKIWRSMDNKKPSAFTTTYEDGIKRVN 700
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A + E + + + IG G+G A + SP +S AIL+L E G
Sbjct: 701 QGNYAFLMESTMLDYIVQRDCNLTQIGGLLDTKGYGIATPKGSPWRDKISLAILELQERG 760
Query: 689 MLQKLHEKWF--CKEGCPEERR-QHSEPHQLRLISFWGLY--LLCGTIT--FTAFLVF 739
+Q L++KW+ E C + + S+ + L L S G++ L+ G I AF F
Sbjct: 761 DIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLESIGGVFVVLIAGIIVAAVVAFFEF 818
Score = 98 (39.6 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 69/321 (21%), Positives = 122/321 (38%)
Query: 12 PLVSFAAT--DPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYG-- 67
P S AT + AL P RS S + L++ Y + +VI +G
Sbjct: 94 PTDSVLATHINSICDALDIPNIGRSAHDFSINVYPSKQLVN-YAFNDVIQYLNWTRFGIL 152
Query: 68 ---RNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDP- 123
NGI L + +V + Q ++ LN K G ++ + + +
Sbjct: 153 HEKENGIINLHQLSRSFHGEVHMR-----QVSRDSYVSALNEFK--GKEIHNIIIDTNSN 205
Query: 124 GLRIFTTAQKLQMMTN---NYVWLATDWLSATLESFSK--MNQTSLRILQGV-VGLRQHT 177
G+ I Q M +Y++ + D + LE F +N TS R++ VG++Q
Sbjct: 206 GISILLKNILQQQMNEYKYHYLFTSFDLETYDLEDFKYNFVNITSFRLVDTADVGVKQIL 265
Query: 178 PDS--IPKKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSAS 235
D F + + K S L + +D+V+ A + H++T
Sbjct: 266 KDIGLYSHHIFKKPYLNLHIKK--STILESEPALMFDSVYVFAIGLQTLEQSHSLTL--- 320
Query: 236 HELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
+ E+ +DGG L+ L + GL+G +QF + + + D+I +
Sbjct: 321 --------LNISCEEENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQFK-LDLIKLK 371
Query: 296 KMEIHRVGYWFDGSGFSVLPP 316
+ I +VG W ++ P
Sbjct: 372 QHSIVKVGEWTPHGHLNITEP 392
>UNIPROTKB|H7BYG7 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 ProteinModelPortal:H7BYG7
SMR:H7BYG7 Ensembl:ENST00000389124 Bgee:H7BYG7 Uniprot:H7BYG7
Length = 871
Score = 172 (65.6 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 113/541 (20%), Positives = 217/541 (40%)
Query: 70 GISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRI 127
G+ L ++ K ++ + K+ + + D LL K G YV+ S + I
Sbjct: 182 GLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDCSHETAAEI 239
Query: 128 FTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VGLRQHTPDSIPKKA 185
+ MMT Y + T TL+ F+ L GV G R D+ +
Sbjct: 240 LKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTGFRLLNIDNPHVSS 292
Query: 186 FLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATR 245
+ +WS M++ L + GL D + ++ + + ASH +
Sbjct: 293 IIEKWS-MER--LQAPPRPETGLL--DGMMTTEAAL--MYDAVYMVAIASHRASQLTVSS 345
Query: 246 VQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
+Q + K + G + + + + GL+G + FN+ N + + +D+ I E
Sbjct: 346 LQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKT-NGLRKDFDLDIISLKE------- 397
Query: 306 FDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGK----TET--PRGWVIADNA--RP 357
+G+ E G+ H WK I W T++ + I D+ R
Sbjct: 398 -EGT-------EKAAGEVSKHLYKVWKKIGI-WNSNSGLNMTDSNKDKSSNITDSLANRT 448
Query: 358 LRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSN 413
L + +V + + + + + +GYC+D+L E ++ + K G G N
Sbjct: 449 LIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQN 508
Query: 414 PS--YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAW 470
++G+VK + + D AV + I R K++DFS+P+++ G+ ++ N +
Sbjct: 509 DKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVF 568
Query: 471 VFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP----PRRQIA----TM---FL 519
FL P + ++W + + ++ V++++ ++ P P + T+ F
Sbjct: 569 SFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFW 628
Query: 520 FSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
F L + E +L R I SSYTA+L++ LTV+++ + + +
Sbjct: 629 FGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD 688
Query: 579 L 579
L
Sbjct: 689 L 689
Score = 134 (52.2 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 77/350 (22%), Positives = 137/350 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAILDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 178 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 231
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 232 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 288
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 289 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 333
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVI 292
ASH + +Q + K + G + + + + GL+G + FN+ + D+I
Sbjct: 334 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDII 393
Query: 293 NI-----DKM--EI--H------RVGYWFDGSGFSVLPPETLKGKNVSHS 327
++ +K E+ H ++G W SG ++ K N++ S
Sbjct: 394 SLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDKSSNITDS 443
Score = 125 (49.1 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 58/254 (22%), Positives = 97/254 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 604 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 663
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 664 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 722
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 723 FMSSRQ--QTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 780
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
SP ++ AIL+L E G L + EKW+ GCPEE + E L + + G+
Sbjct: 781 VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DNKEASALGVENIGGI 838
Query: 725 YL-LCGTITFTAFL 737
++ L + + F+
Sbjct: 839 FIVLAAGLVLSVFV 852
>UNIPROTKB|P39086 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0014054 "positive
regulation of gamma-aminobutyric acid secretion" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IDA] [GO:0051966 "regulation of
synaptic transmission, glutamatergic" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0007417 "central nervous system development"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0048266 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0032230 GO:GO:0060080 GO:GO:0007417
GO:GO:0035249 DrugBank:DB00142 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 DrugBank:DB00273 GO:GO:0051966 GO:GO:0016595
eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:L19058
EMBL:U16125 EMBL:AJ249208 IPI:IPI00783047 IPI:IPI00937051
PIR:I58178 RefSeq:NP_000821.1 RefSeq:NP_783300.1 UniGene:Hs.664641
PDB:2ZNS PDB:2ZNT PDB:2ZNU PDB:3FUZ PDB:3FV1 PDB:3FV2 PDB:3FVG
PDB:3FVK PDB:3FVN PDB:3FVO PDBsum:2ZNS PDBsum:2ZNT PDBsum:2ZNU
PDBsum:3FUZ PDBsum:3FV1 PDBsum:3FV2 PDBsum:3FVG PDBsum:3FVK
PDBsum:3FVN PDBsum:3FVO ProteinModelPortal:P39086 SMR:P39086
STRING:P39086 PhosphoSite:P39086 DMDM:729597 PaxDb:P39086
PRIDE:P39086 DNASU:2897 Ensembl:ENST00000389125
Ensembl:ENST00000399907 GeneID:2897 KEGG:hsa:2897 UCSC:uc002ynn.3
UCSC:uc002yno.1 CTD:2897 GeneCards:GC21M030909 HGNC:HGNC:4579
MIM:138245 neXtProt:NX_P39086 PharmGKB:PA28973 KO:K05201
BindingDB:P39086 ChEMBL:CHEMBL1918 EvolutionaryTrace:P39086
GenomeRNAi:2897 NextBio:11463 ArrayExpress:P39086 Bgee:P39086
CleanEx:HS_GRIK1 Genevestigator:P39086 GermOnline:ENSG00000171189
GO:GO:0022843 Uniprot:P39086
Length = 918
Score = 172 (65.6 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 113/541 (20%), Positives = 217/541 (40%)
Query: 70 GISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRI 127
G+ L ++ K ++ + K+ + + D LL K G YV+ S + I
Sbjct: 182 GLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDCSHETAAEI 239
Query: 128 FTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VGLRQHTPDSIPKKA 185
+ MMT Y + T TL+ F+ L GV G R D+ +
Sbjct: 240 LKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTGFRLLNIDNPHVSS 292
Query: 186 FLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATR 245
+ +WS M++ L + GL D + ++ + + ASH +
Sbjct: 293 IIEKWS-MER--LQAPPRPETGLL--DGMMTTEAAL--MYDAVYMVAIASHRASQLTVSS 345
Query: 246 VQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
+Q + K + G + + + + GL+G + FN+ N + + +D+ I E
Sbjct: 346 LQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKT-NGLRKDFDLDIISLKE------- 397
Query: 306 FDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGK----TET--PRGWVIADNA--RP 357
+G+ E G+ H WK I W T++ + I D+ R
Sbjct: 398 -EGT-------EKAAGEVSKHLYKVWKKIGI-WNSNSGLNMTDSNKDKSSNITDSLANRT 448
Query: 358 LRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSN 413
L + +V + + + + + +GYC+D+L E ++ + K G G N
Sbjct: 449 LIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQN 508
Query: 414 PS--YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAW 470
++G+VK + + D AV + I R K++DFS+P+++ G+ ++ N +
Sbjct: 509 DKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVF 568
Query: 471 VFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP----PRRQIA----TM---FL 519
FL P + ++W + + ++ V++++ ++ P P + T+ F
Sbjct: 569 SFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFW 628
Query: 520 FSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
F L + E +L R I SSYTA+L++ LTV+++ + + +
Sbjct: 629 FGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD 688
Query: 579 L 579
L
Sbjct: 689 L 689
Score = 134 (52.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 77/350 (22%), Positives = 137/350 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAILDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 178 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 231
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 232 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 288
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 289 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 333
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVI 292
ASH + +Q + K + G + + + + GL+G + FN+ + D+I
Sbjct: 334 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDII 393
Query: 293 NI-----DKM--EI--H------RVGYWFDGSGFSVLPPETLKGKNVSHS 327
++ +K E+ H ++G W SG ++ K N++ S
Sbjct: 394 SLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDKSSNITDS 443
Score = 125 (49.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 58/254 (22%), Positives = 97/254 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 604 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 663
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 664 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 722
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 723 FMSSRQ--QTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 780
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
SP ++ AIL+L E G L + EKW+ GCPEE + E L + + G+
Sbjct: 781 VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DNKEASALGVENIGGI 838
Query: 725 YL-LCGTITFTAFL 737
++ L + + F+
Sbjct: 839 FIVLAAGLVLSVFV 852
>UNIPROTKB|E9PD61 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792018
ProteinModelPortal:E9PD61 SMR:E9PD61 Ensembl:ENST00000399913
UCSC:uc011acs.2 ArrayExpress:E9PD61 Bgee:E9PD61 Uniprot:E9PD61
Length = 920
Score = 172 (65.6 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 113/541 (20%), Positives = 217/541 (40%)
Query: 70 GISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRI 127
G+ L ++ K ++ + K+ + + D LL K G YV+ S + I
Sbjct: 182 GLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDCSHETAAEI 239
Query: 128 FTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VGLRQHTPDSIPKKA 185
+ MMT Y + T TL+ F+ L GV G R D+ +
Sbjct: 240 LKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTGFRLLNIDNPHVSS 292
Query: 186 FLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATR 245
+ +WS M++ L + GL D + ++ + + ASH +
Sbjct: 293 IIEKWS-MER--LQAPPRPETGLL--DGMMTTEAAL--MYDAVYMVAIASHRASQLTVSS 345
Query: 246 VQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
+Q + K + G + + + + GL+G + FN+ N + + +D+ I E
Sbjct: 346 LQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKT-NGLRKDFDLDIISLKE------- 397
Query: 306 FDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGK----TET--PRGWVIADNA--RP 357
+G+ E G+ H WK I W T++ + I D+ R
Sbjct: 398 -EGT-------EKAAGEVSKHLYKVWKKIGI-WNSNSGLNMTDSNKDKSSNITDSLANRT 448
Query: 358 LRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSN 413
L + +V + + + + + +GYC+D+L E ++ + K G G N
Sbjct: 449 LIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQN 508
Query: 414 PS--YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAW 470
++G+VK + + D AV + I R K++DFS+P+++ G+ ++ N +
Sbjct: 509 DKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVF 568
Query: 471 VFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP----PRRQIA----TM---FL 519
FL P + ++W + + ++ V++++ ++ P P + T+ F
Sbjct: 569 SFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFW 628
Query: 520 FSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
F L + E +L R I SSYTA+L++ LTV+++ + + +
Sbjct: 629 FGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD 688
Query: 579 L 579
L
Sbjct: 689 L 689
Score = 134 (52.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 77/350 (22%), Positives = 137/350 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAILDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 178 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 231
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 232 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 288
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 289 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 333
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVI 292
ASH + +Q + K + G + + + + GL+G + FN+ + D+I
Sbjct: 334 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDII 393
Query: 293 NI-----DKM--EI--H------RVGYWFDGSGFSVLPPETLKGKNVSHS 327
++ +K E+ H ++G W SG ++ K N++ S
Sbjct: 394 SLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDKSSNITDS 443
Score = 125 (49.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 58/254 (22%), Positives = 97/254 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 604 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 663
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 664 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 722
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 723 FMSSRQ--QTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 780
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
SP ++ AIL+L E G L + EKW+ GCPEE + E L + + G+
Sbjct: 781 VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DNKEASALGVENIGGI 838
Query: 725 YL-LCGTITFTAFL 737
++ L + + F+
Sbjct: 839 FIVLAAGLVLSVFV 852
>UNIPROTKB|E7ENK3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790860
ProteinModelPortal:E7ENK3 SMR:E7ENK3 Ensembl:ENST00000327783
OMA:KELIDHR ArrayExpress:E7ENK3 Bgee:E7ENK3 Uniprot:E7ENK3
Length = 949
Score = 172 (65.6 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 113/541 (20%), Positives = 217/541 (40%)
Query: 70 GISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRI 127
G+ L ++ K ++ + K+ + + D LL K G YV+ S + I
Sbjct: 182 GLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDCSHETAAEI 239
Query: 128 FTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VGLRQHTPDSIPKKA 185
+ MMT Y + T TL+ F+ L GV G R D+ +
Sbjct: 240 LKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTGFRLLNIDNPHVSS 292
Query: 186 FLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATR 245
+ +WS M++ L + GL D + ++ + + ASH +
Sbjct: 293 IIEKWS-MER--LQAPPRPETGLL--DGMMTTEAAL--MYDAVYMVAIASHRASQLTVSS 345
Query: 246 VQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYW 305
+Q + K + G + + + + GL+G + FN+ N + + +D+ I E
Sbjct: 346 LQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKT-NGLRKDFDLDIISLKE------- 397
Query: 306 FDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGK----TET--PRGWVIADNA--RP 357
+G+ E G+ H WK I W T++ + I D+ R
Sbjct: 398 -EGT-------EKAAGEVSKHLYKVWKKIGI-WNSNSGLNMTDSNKDKSSNITDSLANRT 448
Query: 358 LRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSN 413
L + +V + + + + + +GYC+D+L E ++ + K G G N
Sbjct: 449 LIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQN 508
Query: 414 PS--YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAW 470
++G+VK + + D AV + I R K++DFS+P+++ G+ ++ N +
Sbjct: 509 DKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVF 568
Query: 471 VFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP----PRRQIA----TM---FL 519
FL P + ++W + + ++ V++++ ++ P P + T+ F
Sbjct: 569 SFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFW 628
Query: 520 FSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
F L + E +L R I SSYTA+L++ LTV+++ + + +
Sbjct: 629 FGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADD 688
Query: 579 L 579
L
Sbjct: 689 L 689
Score = 134 (52.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 77/350 (22%), Positives = 137/350 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAILDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 178 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 231
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 232 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 288
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 289 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 333
Query: 234 ASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSR-GYDVI 292
ASH + +Q + K + G + + + + GL+G + FN+ + D+I
Sbjct: 334 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDII 393
Query: 293 NI-----DKM--EI--H------RVGYWFDGSGFSVLPPETLKGKNVSHS 327
++ +K E+ H ++G W SG ++ K N++ S
Sbjct: 394 SLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDKSSNITDS 443
Score = 125 (49.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 58/254 (22%), Positives = 97/254 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 604 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 663
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 664 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 722
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 723 FMSSRQ--QTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 780
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
SP ++ AIL+L E G L + EKW+ GCPEE + E L + + G+
Sbjct: 781 VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DNKEASALGVENIGGI 838
Query: 725 YL-LCGTITFTAFL 737
++ L + + F+
Sbjct: 839 FIVLAAGLVLSVFV 852
>ZFIN|ZDB-GENE-060809-5 [details] [associations]
symbol:si:ch211-251b21.1 "si:ch211-251b21.1"
species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 ZFIN:ZDB-GENE-060809-5 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG241927
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HOVERGEN:HBG104989 OrthoDB:EOG43FGX0 EMBL:CU499311 IPI:IPI00482094
RefSeq:NP_001138274.1 UniGene:Dr.3211 Ensembl:ENSDART00000008778
Ensembl:ENSDART00000139096 GeneID:571720 KEGG:dre:571720
OMA:QEGNFAF NextBio:20890667 Uniprot:B8JLR6
Length = 458
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 83/363 (22%), Positives = 153/363 (42%)
Query: 380 KVQGYCIDILLEAL--KL-VPYDVPY-KFELFGDGLSNPSYDGLVKMVANDVFDAAVGDI 435
+++G+CID +L A+ KL YDV K +G + +++G++ V D AV +
Sbjct: 42 ELEGFCID-MLSAISNKLGFKYDVHLVKDGRYGKTDDSGNWNGMIGEVVRGEADIAVAPL 100
Query: 436 AIVTNRTKIVDFSQPYISTGLVIVA--PINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
+ R +VD S+P++ TGL + + + + LK F+ EMW ++++ ++
Sbjct: 101 TLTAQREAVVDMSKPFMQTGLSFIMRKDLGSDDSQFLSLLKLFSTEMWMGVLVAYLLTSI 160
Query: 494 VIWILEHRVNDDFRGPPRRQ----IATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXX 548
I+++ ++ P + ++ F ++ L +L GR
Sbjct: 161 CIFLVSRISPCEWEQPEKDNNSFTLSHSFWYTVGALTLQGAGPHPKALSGRVITSIWWIF 220
Query: 549 XXXITSSYTASLSSILTVQQLSTSVKGIESLIT-NDWPIGYQVGSFAYSYLSDSLRIQKS 607
+ + Y A+LS L S+K E L N G S ++++ +S
Sbjct: 221 SLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNVIEYGTIKDSSSFNFFKNSNNPTYH 280
Query: 608 RLIS-LGSPEDYERALRQGPRNG--GVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
R+ + + Y +G R G A + E + L ++ + + G+
Sbjct: 281 RIYEHIKEAQSYSLNAAEGFRRAQKGNYAFIGESVSLDLAVARYCNLTRAPEIIGMRGYS 340
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
A SPL +S AIL+LSE+G L KW+ C + S+ L+ S G+
Sbjct: 341 IAAPLGSPLIKNLSVAILRLSESGELDYFRSKWWASS-CVAK---DSKGAPLKPASLKGV 396
Query: 725 YLL 727
+LL
Sbjct: 397 FLL 399
>UNIPROTKB|G3N1N5 [details] [associations]
symbol:100335496 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:DAAA02039769 EMBL:DAAA02039770
Ensembl:ENSBTAT00000063398 Uniprot:G3N1N5
Length = 660
Score = 177 (67.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 200 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 257
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 258 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 317
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 318 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 377
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 378 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 419
Score = 135 (52.6 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 64/262 (24%), Positives = 106/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 347 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 406
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 407 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 465
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 466 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNA 525
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 526 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 585
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 586 -AMLVALIEF-CYKSRAEAKRM 605
Score = 75 (31.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 32/124 (25%), Positives = 47/124 (37%)
Query: 187 LSRWSGMQQK---GLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKA 243
+ RW + Q+ G + T L YD V +A + + + I S D A
Sbjct: 34 MDRWKKLDQREYPGSETPPKYTSAL-TYDGVLVMAETF-RSLRRQKIDISRRGNAGDCLA 91
Query: 244 TRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVG 303
+ G + R L Q GL+G VQF+ V+ DV + +VG
Sbjct: 92 NPAA-----PWGQGIDMERTLKQVQIQGLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVG 146
Query: 304 YWFD 307
YW D
Sbjct: 147 YWND 150
>UNIPROTKB|F1SSA9 [details] [associations]
symbol:GRIN3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043005 "neuron projection" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0016358 "dendrite development" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0045471
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0016358 GO:GO:0035235 GO:GO:0043005 GO:GO:0060134
GO:GO:0030288 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 OMA:QSQGEMM GO:GO:0004972
EMBL:AEMK01037328 EMBL:CU104758 EMBL:CU313312
Ensembl:ENSSSCT00000005943 Uniprot:F1SSA9
Length = 1116
Score = 217 (81.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 89/370 (24%), Positives = 161/370 (43%)
Query: 383 GYCIDILLEALKLVPYDVPYKFELFGDGL----SNPSYDGLVKMVANDVFDAAVGDIAIV 438
GYCID+L + + + +D + + GDG N + GLV ++ AV +I
Sbjct: 581 GYCIDLLEKLSEDMNFD--FDLYIVGDGKYGAWKNGHWTGLVGDLSGSAH-MAVTSFSIN 637
Query: 439 TNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWIL 498
T R++++DF+ P+ ST L I+ + A F+ P MW + + A+ + +
Sbjct: 638 TARSQVIDFTSPFFSTSLGILVRTRDTAAPIGAFMWPLHWTMWLGIFVALHITAIFLTLY 697
Query: 499 EHRVNDDFRGPPR-RQIATMFLFS------FSTLFKTNQEATVSS----LGRXXXXXXXX 547
E + F P+ R +F FS ++ LF + A + GR
Sbjct: 698 EWK--SPFGMTPKGRNRNKVFSFSSALNVCYALLF--GRTAAIKPPKCWTGRFLMNLWAI 753
Query: 548 XXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQVGSFAYSYLSDSLRI--- 604
S+YTA+L++++ +++ + GI + G++ G+ S D +R
Sbjct: 754 FCMFCLSTYTANLAAVMVGEKIYEELSGIHDPKLHHPSQGFRFGTVRESSAEDYVRQSFP 813
Query: 605 ---QKSRLISLGSPEDYERALRQGPRNGGVAAIVDE--LPYVQLFLSNQTDFGIIGQPFT 659
+ R ++ + D L+ P A I+D+ L Y ++ + +G+PF
Sbjct: 814 EMHEYMRRYNVPATLDGVEYLKNDPEKLD-AFIMDKALLDY-EVSVDADCKLLTVGKPFA 871
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G +SPL +S I + +G + LH+KW+ C + +E Q+ +
Sbjct: 872 IEGYGIGLPPNSPLTSNISELISQYKSHGFMDVLHDKWYKVVPCGKRSFAVTETLQMGIK 931
Query: 720 SFWGLY-LLC 728
F GL+ LLC
Sbjct: 932 HFSGLFVLLC 941
Score = 38 (18.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 20/79 (25%), Positives = 32/79 (40%)
Query: 264 LLQTNFTGLSGQVQFNQDRNIVSRG-YDVINID-----KMEIHRVGYWFDGS---GFSVL 314
L T F GLSG ++ I S + + N+ K R+G W G + +
Sbjct: 440 LANTTFRGLSGSIRVKGSTIISSENNFFIWNLQHDPMGKPMWTRLGSWQGGKIVMDYGIW 499
Query: 315 PPETLKGKNVSHSQLDWKL 333
P + + + +H Q KL
Sbjct: 500 PEQAQRHR--THFQHPSKL 516
>UNIPROTKB|I3L9I7 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0009986 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0035235 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
EMBL:FP312836 Ensembl:ENSSSCT00000032251 OMA:SHERREQ Uniprot:I3L9I7
Length = 530
Score = 164 (62.8 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 54/222 (24%), Positives = 103/222 (46%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG---LSNP---SYDGLVKMVANDVFDAAVG 433
+ +GYC+++ E K V Y Y+ E+ DG +P +++G+V + D AV
Sbjct: 203 RYEGYCVELAAEIAKHVGYS--YRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVA 260
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 261 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 320
Query: 493 VVIWILEHRV-----NDDFR-GPPRRQ--------IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ +++F G + I FS + + + SL
Sbjct: 321 VVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLS 380
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LT + +S ++ E L
Sbjct: 381 GRIVGGVWWFFTLIIISSYTANLAAFLTERMVSP-IESAEDL 421
Score = 84 (34.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 257 GTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGF 311
G + R L Q F GL+G VQFN+ + VI + I ++GYW + F
Sbjct: 103 GIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDDKF 157
>UNIPROTKB|F1PG03 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023554 Uniprot:F1PG03
Length = 740
Score = 177 (67.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 54/222 (24%), Positives = 101/222 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDAAVG 433
K +GYC+D+ E K + + YK + DG ++G+V + + A+
Sbjct: 280 KYEGYCVDLASEIAKHI--GIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIA 337
Query: 434 DIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I R +++DFS+P++S G+ +++ K + FL P E+W +++ ++
Sbjct: 338 PLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVS 397
Query: 493 VVIWILE-------H--RVNDDFRGP---PRRQ--IATMFLFSFSTLFKTNQEATVSSL- 537
VV++++ H D GP P + I FS + + + SL
Sbjct: 398 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 457
Query: 538 GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 458 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 499
Score = 135 (52.6 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 64/262 (24%), Positives = 106/262 (40%)
Query: 509 PPRR-QIATMFLFSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTV 566
PP I FS + + + SL GR I SSYTA+L++ LTV
Sbjct: 427 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 486
Query: 567 QQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLISLGS--PEDYERA 621
+++ + ++ E L I Y GS + + + + + S P + R
Sbjct: 487 ERMVSPIESAEDL-AKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRT 545
Query: 622 LRQG-----PRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVG 676
+G G A +++ + D +G G+G A + S L
Sbjct: 546 TAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNA 605
Query: 677 MSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITF 733
++ A+LKL+E G+L KL KW+ +G C + L L + G+ Y+L G +
Sbjct: 606 VNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGL 665
Query: 734 TAFLVFLLRMVCQYVRYKQQQM 755
A LV L+ C R + ++M
Sbjct: 666 -AMLVALIEF-CYKSRAEAKRM 685
Score = 74 (31.1 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 257 GTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFD 307
G + R L Q GL+G VQF+ V+ DV + +VGYW D
Sbjct: 180 GIDMERTLKQVRIQGLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYWND 230
>ZFIN|ZDB-GENE-020125-4 [details] [associations]
symbol:gria2b "glutamate receptor, ionotropic, AMPA
2b" species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-4 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HSSP:P19491 EMBL:AF361751 IPI:IPI00513119 UniGene:Dr.81161
ProteinModelPortal:Q90XP6 SMR:Q90XP6 InParanoid:Q90XP6
ArrayExpress:Q90XP6 Uniprot:Q90XP6
Length = 897
Score = 178 (67.7 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 54/224 (24%), Positives = 105/224 (46%)
Query: 377 DSHKVQGYCIDILLEALKLVPYDVPYKFELFGDG------LSNPSYDGLVKMVANDVFDA 430
D+ + +GYC+D+ E K + Y+ ++ GDG ++G+V + D
Sbjct: 435 DNERYEGYCVDLAAEIAKHCGFK--YQLKIVGDGKYGARDAETKIWNGMVGELVYGKADI 492
Query: 431 AVGDIAIVTNRTKIVDFSQPYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFV 489
AV + I R +++DFS+P++S G+ +++ K + FL P E+W +++
Sbjct: 493 AVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYI 552
Query: 490 MIAVVIWIL------EHRVNDDFRGPPRRQIAT----MF---LFSFSTLFKTNQEATVSS 536
++VV++++ E + G + +T +F FS + + + S
Sbjct: 553 GVSVVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRS 612
Query: 537 L-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESL 579
L GR I SSYTA+L++ LTV+++ + ++ E L
Sbjct: 613 LPGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDL 656
Score = 131 (51.2 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 65/250 (26%), Positives = 104/250 (41%)
Query: 520 FSFSTLFKTNQEATVSSL-GRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
FS + + + SL GR I SSYTA+L++ LTV+++ + ++ E
Sbjct: 596 FSLGAFMRQGCDISPRSLPGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAED 655
Query: 579 LITNDWPIGYQV---GS----FAYSYLS--DSL-RIQKSRLISLGSPEDYERALRQGPRN 628
L I Y GS F S ++ D + K S+ E +R
Sbjct: 656 L-AKQTEIAYGTLDSGSTKEFFRRSKIALFDKMWTYMKGAEPSVFVKTTAEGVMRVRKSK 714
Query: 629 GGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENG 688
G A +++ + D +G G+G A + S L ++ A+LKL+E G
Sbjct: 715 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 774
Query: 689 MLQKLHEKWFCKEG-CPEERRQHSEPHQ-LRLISFWGL-YLLCGTITFTAFLVFLLRMVC 745
+L KL KW+ +G C E L L + G+ Y+L G + A LV L+ C
Sbjct: 775 LLDKLKNKWWYDKGECGTGGGDSKEKTSALSLSNVAGVFYILVGGLGL-AMLVALVEF-C 832
Query: 746 QYVRYKQQQM 755
R + ++M
Sbjct: 833 YKSRAEAKRM 842
Score = 77 (32.2 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 31/130 (23%), Positives = 52/130 (40%)
Query: 179 DSIPKKAFLSRWSGMQQKGLVSAG--LNTYGLYAYDTVWAVARSIDKFINEHNITFSASH 236
D + K F RW +++K A + YD V + + +++++ I S
Sbjct: 266 DPLVSK-FDQRWEALEEKEYPGADSKIRYTSALTYDAVQVMTEAF-RYLHKQRIDISRRA 323
Query: 237 ELPDSKAT-RVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
D A V Q G + R L Q GL+G +QF+Q V+ V+ +
Sbjct: 324 NNGDCLANPAVPWAQ------GVEIERALKQVRVDGLTGNIQFDQYGKRVNYTVHVMELK 377
Query: 296 KMEIHRVGYW 305
++GYW
Sbjct: 378 SNGAVKIGYW 387
Score = 43 (20.2 bits), Expect = 2.8e-12, Sum P(3) = 2.8e-12
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 45 MADLIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEK 80
+ LI++Y W + +Y D D G + L EK
Sbjct: 135 LLSLIEYYKWDKFAYLY-DSDRGLTTLQVVLDTAAEK 170
>UNIPROTKB|F8W7X3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01010383
ProteinModelPortal:F8W7X3 SMR:F8W7X3 PRIDE:F8W7X3
Ensembl:ENST00000309434 PhylomeDB:F8W7X3 ArrayExpress:F8W7X3
Bgee:F8W7X3 Uniprot:F8W7X3
Length = 920
Score = 179 (68.1 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 120/550 (21%), Positives = 219/550 (39%)
Query: 70 GISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRI 127
G+ L ++ K ++ + K+ + + D LL K G YV+ S + I
Sbjct: 182 GLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDCSHETAAEI 239
Query: 128 FTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VGLRQHTPDSIPKKA 185
+ MMT Y + T TL+ F+ L GV G R D+ +
Sbjct: 240 LKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTGFRLLNIDNPHVSS 292
Query: 186 FLSRWS--GMQ-----QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHEL 238
+ +WS +Q + GL+ + T YD V+ VA ASH
Sbjct: 293 IIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IASHRA 338
Query: 239 PDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK 296
+ +Q + K + G F+ L K + GL+G + FN+ N + + +D+ I
Sbjct: 339 SQLTVSSLQCHRHKPWRLGPRFMNLIKEATARWDGLTGHITFNKT-NGLRKDFDLDIISL 397
Query: 297 MEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGK----TET--PRGWV 350
E +G+ E G+ H WK I W T++ +
Sbjct: 398 KE--------EGT-------EKAAGEVSKHLYKVWKKIGI-WNSNSGLNMTDSNKDKSSN 441
Query: 351 IADNA--RPLRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEALKLVPYDVPYKFE 405
I D+ R L + +V + + + + + +GYC+D+L E ++ + K
Sbjct: 442 ITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLV 501
Query: 406 LFGD-GLSNPS--YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAP 461
G G N ++G+VK + + D AV + I R K++DFS+P+++ G+ ++
Sbjct: 502 PDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRK 561
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP----PRRQIA-- 515
N + FL P + ++W + + ++ V++++ ++ P P +
Sbjct: 562 PNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVEN 621
Query: 516 --TM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQL 569
T+ F F L + E +L R I SSYTA+L++ LTV+++
Sbjct: 622 NFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERM 681
Query: 570 STSVKGIESL 579
+ + + L
Sbjct: 682 ESPIDSADDL 691
Score = 128 (50.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 80/352 (22%), Positives = 138/352 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAILDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 178 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 231
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 232 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 288
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 289 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 333
Query: 234 ASHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQDRNIVSR-GYD 290
ASH + +Q + K + G F+ L K + GL+G + FN+ + D
Sbjct: 334 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEATARWDGLTGHITFNKTNGLRKDFDLD 393
Query: 291 VINI-----DKM--EI--H------RVGYWFDGSGFSVLPPETLKGKNVSHS 327
+I++ +K E+ H ++G W SG ++ K N++ S
Sbjct: 394 IISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDKSSNITDS 445
Score = 125 (49.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 58/254 (22%), Positives = 97/254 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 606 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 665
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 666 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 724
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 725 FMSSRQ--QTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 782
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
SP ++ AIL+L E G L + EKW+ GCPEE + E L + + G+
Sbjct: 783 VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DNKEASALGVENIGGI 840
Query: 725 YL-LCGTITFTAFL 737
++ L + + F+
Sbjct: 841 FIVLAAGLVLSVFV 854
>UNIPROTKB|F5H1W5 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01013593
ProteinModelPortal:F5H1W5 SMR:F5H1W5 Ensembl:ENST00000535441
ArrayExpress:F5H1W5 Bgee:F5H1W5 Uniprot:F5H1W5
Length = 922
Score = 179 (68.1 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 120/550 (21%), Positives = 219/550 (39%)
Query: 70 GISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-VSPDPGLRI 127
G+ L ++ K ++ + K+ + + D LL K G YV+ S + I
Sbjct: 182 GLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDCSHETAAEI 239
Query: 128 FTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VGLRQHTPDSIPKKA 185
+ MMT Y + T TL+ F+ L GV G R D+ +
Sbjct: 240 LKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTGFRLLNIDNPHVSS 292
Query: 186 FLSRWS--GMQ-----QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHEL 238
+ +WS +Q + GL+ + T YD V+ VA ASH
Sbjct: 293 IIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IASHRA 338
Query: 239 PDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK 296
+ +Q + K + G F+ L K + GL+G + FN+ N + + +D+ I
Sbjct: 339 SQLTVSSLQCHRHKPWRLGPRFMNLIKEATARWDGLTGHITFNKT-NGLRKDFDLDIISL 397
Query: 297 MEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGK----TET--PRGWV 350
E +G+ E G+ H WK I W T++ +
Sbjct: 398 KE--------EGT-------EKAAGEVSKHLYKVWKKIGI-WNSNSGLNMTDSNKDKSSN 441
Query: 351 IADNA--RPLRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEALKLVPYDVPYKFE 405
I D+ R L + +V + + + + + +GYC+D+L E ++ + K
Sbjct: 442 ITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKELSNILGFIYDVKLV 501
Query: 406 LFGD-GLSNPS--YDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGL-VIVAP 461
G G N ++G+VK + + D AV + I R K++DFS+P+++ G+ ++
Sbjct: 502 PDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRK 561
Query: 462 INNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP----PRRQIA-- 515
N + FL P + ++W + + ++ V++++ ++ P P +
Sbjct: 562 PNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVEN 621
Query: 516 --TM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQL 569
T+ F F L + E +L R I SSYTA+L++ LTV+++
Sbjct: 622 NFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERM 681
Query: 570 STSVKGIESL 579
+ + + L
Sbjct: 682 ESPIDSADDL 691
Score = 128 (50.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 80/352 (22%), Positives = 138/352 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDNKDL-FYINLYPDYAAISRAILDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPL-PVQFNQHDITVLLNNSKPLGPRVYVVH-V 119
D G+ L ++ K ++ + K+ + + D LL K G YV+
Sbjct: 178 EDS----TGLIRLQELI-KAPSRYNIKIKIRQLPSGNKDAKPLLKEMKK-GKEFYVIFDC 231
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQ 175
S + I + MMT Y + T D + LE +S +N T R+L +
Sbjct: 232 SHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NP 288
Query: 176 HTPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFS 233
H SI +K + R + GL+ + T YD V+ VA
Sbjct: 289 HV-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------I 333
Query: 234 ASHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQDRNIVSR-GYD 290
ASH + +Q + K + G F+ L K + GL+G + FN+ + D
Sbjct: 334 ASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEATARWDGLTGHITFNKTNGLRKDFDLD 393
Query: 291 VINI-----DKM--EI--H------RVGYWFDGSGFSVLPPETLKGKNVSHS 327
+I++ +K E+ H ++G W SG ++ K N++ S
Sbjct: 394 IISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNMTDSNKDKSSNITDS 445
Score = 125 (49.1 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 58/254 (22%), Positives = 97/254 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 606 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 665
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GSFAYSYLSDSLRIQKSRLI 610
SSYTA+L++ LTV+++ + + + L I Y GS + + +
Sbjct: 666 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 724
Query: 611 SLGSPEDYERALRQGPRNG--GVA----AIVDELPYVQLFLSNQTDFGIIGQPFTRSGWG 664
+ S + + AL + G V A++ E ++ + IG G+G
Sbjct: 725 FMSSRQ--QTALVRNSDEGIQRVLTTDYALLMESTSIEYVTQRNCNLTQIGGLIDSKGYG 782
Query: 665 FAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGL 724
SP ++ AIL+L E G L + EKW+ GCPEE + E L + + G+
Sbjct: 783 VGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DNKEASALGVENIGGI 840
Query: 725 YL-LCGTITFTAFL 737
++ L + + F+
Sbjct: 841 FIVLAAGLVLSVFV 854
>ZFIN|ZDB-GENE-070821-6 [details] [associations]
symbol:grik5 "glutamate receptor, ionotropic, kainate
5" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-6 GO:GO:0016021
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 EMBL:BX005242 EMBL:CR388405
IPI:IPI00884667 ProteinModelPortal:F1RCX4
Ensembl:ENSDART00000114766 Bgee:F1RCX4 Uniprot:F1RCX4
Length = 716
Score = 181 (68.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 61/260 (23%), Positives = 119/260 (45%)
Query: 374 EEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGL-----SNPSYDGLVKMVANDVF 428
E + + +G+C+D+L E ++ + Y+ +L DGL N S+ G+V + N
Sbjct: 427 EFEGNEQYEGFCVDMLRELSDILKFT--YRIKLVDDGLYGAPEPNGSWTGMVGELINRKA 484
Query: 429 DAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPIN-NHKASAWVFLKPFTVEMWCVTAAS 487
D AV I + R K++DFS+P+++ G+ I+ ++ K + FL PF+ +W +
Sbjct: 485 DLAVAAFTITSEREKVIDFSKPFMTLGISILYRVHIGRKPGYFSFLDPFSPAVWLFMLLA 544
Query: 488 FVMIAVVIWILEHRVNDDFRGP-P----RRQIA----TM---FLFSFSTLFKTNQEATVS 535
++ ++ V+++ ++ P P RR + T+ F + E
Sbjct: 545 YLAVSCVLFLSARLSPYEWYNPHPCLRERRDLLENQYTLGNSLWFPVGGFMQQGSEIMPR 604
Query: 536 SLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GS 592
+L R I SSYTA+L++ LTVQ++ ++ + L + I Y G
Sbjct: 605 ALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDL-ADQTNIQYGTIHGG 663
Query: 593 FAYSYLSDSLRIQKSRLISL 612
++ +SL + + + +
Sbjct: 664 STMTFFMNSLCLDRGHTLEV 683
Score = 67 (28.6 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 23/102 (22%), Positives = 45/102 (44%)
Query: 229 NITFSASHELPDSKATRVQ---LEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIV 285
++ SA EL S+ V+ +++ GT L+ L + GL+G+V+FN
Sbjct: 303 HVVVSAVQELNRSQEIGVKPLSCTSPQIWQHGTSLMNYLRMVEYDGLTGRVEFNSKGQRT 362
Query: 286 SRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHS 327
+ ++ + +G W+ + ++L T NVS +
Sbjct: 363 NYTLHILEKHRGGHKEIGIWYSNN--TLLMNSTSLDINVSET 402
>FB|FBgn0020429 [details] [associations]
symbol:GluRIIB "Glutamate receptor IIB" species:7227
"Drosophila melanogaster" [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0051968
"positive regulation of synaptic transmission, glutamatergic"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:1900075 "positive regulation of neuromuscular synaptic
transmission" evidence=IMP] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=IPI] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IMP] [GO:0060025 "regulation of
synaptic activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0031594 GO:GO:0030288
InterPro:IPR001828 GO:GO:0004971 GO:GO:0005234 GO:GO:0015277
HSSP:P19491 EMBL:AF044202 ProteinModelPortal:O45028 SMR:O45028
STRING:O45028 PRIDE:O45028 FlyBase:FBgn0020429 eggNOG:NOG241128
InParanoid:O45028 OrthoDB:EOG4ZS7J3 ArrayExpress:O45028 Bgee:O45028
Uniprot:O45028
Length = 913
Score = 127 (49.8 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 31/123 (25%), Positives = 63/123 (51%)
Query: 378 SHKVQGYCIDILLEALKLVPYDV---PYKFELFGDGLSNPS-YDGLVKMVANDVFDAAVG 433
+ + +GY +D++ + +D P + +G +N +DG+++ + ++ +
Sbjct: 449 NERFEGYAVDLIYMLAQECKFDFNFEPVRDNKYGSYDANTDEWDGIIRQLIDNNAQIGIC 508
Query: 434 DIAIVTNRTKIVDFSQPYISTGLVIVAPINNH-KASAWVFLKPFTVEMWCVTAASFVMIA 492
D+ I R +VDF+ P++ G+ I++ KA + FL P+ E+W FVMIA
Sbjct: 509 DLTITQARRSVVDFTVPFMQLGISILSYKEPPPKADIYAFLNPYNAEVWL-----FVMIA 563
Query: 493 VVI 495
++I
Sbjct: 564 MMI 566
Score = 125 (49.1 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
Identities = 46/192 (23%), Positives = 84/192 (43%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLIT-NDWPIGYQVGSFAYSYLSDSL----RIQK 606
I+ +Y A L++ +T +++ + + L+ N G G Y S+S R+
Sbjct: 640 ISQTYIAKLAAFITSSKIAGDIGSLHDLVDQNKVQFGTIRGGATSVYFSESNDTDNRMAW 699
Query: 607 SRLISLGSPEDY----ERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSG 662
++++S P+ + E A+ + G A + E +Q ++ + IG+ F
Sbjct: 700 NKMLSF-KPDAFTKNNEEAVDPVKLSKGTYAFLMETTNLQYYVQRNCELTQIGESFGEKH 758
Query: 663 WGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWF-CKEGCPEERRQHSEPHQLRLISF 721
+G A ++ +S IL+LSE G L KL KWF E + + Q + S
Sbjct: 759 YGIAVPLNADFRSNLSVGILRLSERGELFKLRNKWFNSNESTCDSNVPTIDDGQFDMDSV 818
Query: 722 WGLY--LLCGTI 731
GL+ L+ G +
Sbjct: 819 GGLFVVLIVGVV 830
>UNIPROTKB|E1BXA6 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:LLPWICQ
EMBL:AADN02043560 EMBL:AADN02043561 EMBL:AADN02043562
EMBL:AADN02043563 IPI:IPI00574242 ProteinModelPortal:E1BXA6
Ensembl:ENSGALT00000002914 Uniprot:E1BXA6
Length = 800
Score = 176 (67.0 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 60/235 (25%), Positives = 109/235 (46%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELFG--DG-----LSNPSYDGLVKMVANDVFDAAV 432
+ +G+ ID+L +AL ++ +K+E++ DG L N S++G++ + N D A+
Sbjct: 252 RYKGFSIDVL-DALAK---NLGFKYEIYQAPDGKYGHQLQNGSWNGMIGELINKRADLAI 307
Query: 433 GDIAIVTNRTKIVDFSQPYI--STGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVM 490
I I R +VDFS+ Y+ S G++I P K + + PF +W AA+ +
Sbjct: 308 SAITITPERESVVDFSKRYMDYSVGILIKKP--EEKINIFSLFAPFDFAVWACIAAAIPI 365
Query: 491 IAVVIWILEH----RVNDDFRGPPRRQ--IATMFLFSFSTLFKTNQEATVSSLG-RXXXX 543
+ V+I++L R + + P + + + + E+TV+S+ R
Sbjct: 366 VGVLIFVLNRIQAVRAQNASQPSPSASSTLHSAIWVVYGAFVQQGGESTVNSVAMRIVMG 425
Query: 544 XXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSY 597
+ SSYTA+L++ LTV ++ ++ + L D G S Y Y
Sbjct: 426 SWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQMDISYGTVRDSAVYEY 480
Score = 135 (52.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 60/234 (25%), Positives = 97/234 (41%)
Query: 531 EATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGY 588
E+TV+S+ R + SSYTA+L++ LTV ++ ++ + L D G
Sbjct: 412 ESTVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQMDISYGT 471
Query: 589 QVGSFAYSYLS---------DSLRIQKSRLISLGSPEDY-----ERALRQGPRNGGVAAI 634
S Y Y D+ + R IS + D +R+ + G A +
Sbjct: 472 VRDSAVYEYFKAKGTNPLEQDNTFAELWRTISKNNGADNCVSNPSEGIRKA-KKGNYAFL 530
Query: 635 VDE--LPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQK 692
D + Y L ++ +IG + G+G A Q SP S IL+L E+G L
Sbjct: 531 WDVTVVEYAAL-TDDECSVTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQESGDLDV 589
Query: 693 LHEKWFCKEG-CP--EERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFLLRM 743
L +KW+ + G C ++ L+L SF G++ + A LV L +
Sbjct: 590 LKQKWWPRMGRCDLNSHTNAQTDGKALKLHSFAGVFCILAIGLLLACLVAALEL 643
Score = 71 (30.1 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 195 QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVF 254
Q+G + L LY YD+V +A + + + + H + R + K +
Sbjct: 99 QEGYLQM-LQVSNLYLYDSVLMLANAFHRKLEDRKW-----HSMASLNCMR---KSTKPW 149
Query: 255 DGGTFLLRKLLQTNFTGLSGQVQFNQD 281
+GG +L + + + TGL+G ++F +D
Sbjct: 150 NGGRSMLETIKKGHITGLTGVMEFRED 176
>UNIPROTKB|F1NAD5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0043523 "regulation
of neuron apoptotic process" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0097110
"scaffold protein binding" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0043197 GO:GO:0035235 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:CSFYTVG
EMBL:AADN02016072 EMBL:AADN02016073 EMBL:AADN02016074
EMBL:AADN02016075 EMBL:AADN02016076 EMBL:AADN02016077
EMBL:AADN02016078 EMBL:AADN02016079 IPI:IPI00591618
Ensembl:ENSGALT00000016932 Uniprot:F1NAD5
Length = 908
Score = 167 (63.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 53/236 (22%), Positives = 109/236 (46%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELF-------GDGLSNPSYDGLVKMVANDVFDAAV 432
K QG+ ID+L EAL Y + +K+E++ G + S++GL+ + D +
Sbjct: 367 KYQGFSIDVL-EAL--ANY-LGFKYEIYVAPDHKYGSPQDDGSWNGLIGELVFKRADIGI 422
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I +R +VDF+ Y+ + ++ + L PF + +W A + +++
Sbjct: 423 SALTITPDRENVVDFTTRYMDYSVGVLLRKAEKTVDMFACLAPFDLSLWACIAGTVLLVG 482
Query: 493 VVIWILEHRVNDDFRGPPRRQIATM--------FLFSFSTLFKTNQEATVSSLG-RXXXX 543
+++++L ++ PPR Q+ +M F + + + E ++L R
Sbjct: 483 LLVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRLMMG 536
Query: 544 XXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYL 598
+ SSYTA+L++ LT+ ++ S++ ++ L D P G + S Y ++
Sbjct: 537 AWWLFALIVISSYTANLAAFLTITRIENSIQSLQDLSRQTDIPYGTVLDSAVYEHV 592
Score = 150 (57.9 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 58/209 (27%), Positives = 94/209 (44%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYLS---------DS 601
+ SSYTA+L++ LT+ ++ S++ ++ L D P G + S Y ++ DS
Sbjct: 545 VISSYTANLAAFLTITRIENSIQSLQDLSRQTDIPYGTVLDSAVYEHVRVKGMNPFERDS 604
Query: 602 LRIQKSRLI--SLGSPEDYERALR--QGPRNGGVAAIVDE--LPYVQLFLSNQTDFGIIG 655
+ Q R+I S GS + + Q ++G A + D L YV + F +G
Sbjct: 605 MYSQMWRMINRSNGSENNVLESTAGIQKVKHGNYAFVWDAAVLEYVAIN-DGDCSFYTVG 663
Query: 656 QPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSEPH 714
G+G A Q SP S IL+L +NG + L KW+ K G C ++
Sbjct: 664 NTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDFYSSVDTKQK 723
Query: 715 --QLRLISFWGLY-LLCGTITFTAFLVFL 740
L + SF G++ +L I + F+ L
Sbjct: 724 GGALDIKSFAGVFCILAAGIVLSCFIAML 752
Score = 80 (33.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 61/278 (21%), Positives = 112/278 (40%)
Query: 48 LIDFYGWKEVIAIYVDDDYGRNGISA-LSNMLEKNM----AKVSYKLPLPVQ--FNQHDI 100
+I Y W++ I Y D+DY GI L + ++ M KV + + F I
Sbjct: 60 VITEYAWQKFIIFY-DNDYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITGLFATMRI 118
Query: 101 TVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMN 160
L N + R +V ++P + F T +++ N V W+ E S ++
Sbjct: 119 EEL-NRYRDTLRRAILV-MNPLTA-KSFLT----EVVETNLVAFDCHWIIIN-EEISDLD 170
Query: 161 QTSL--RILQGVVGLRQH--TPDSIPKKAFLS--RWSGM--QQKGLVSAGLNTYGLYAYD 212
L R + + +RQ P +I ++ F R S K S + LY YD
Sbjct: 171 VQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSSLCDPKDPFSQSMEISNLYIYD 230
Query: 213 TVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGL 272
TV +A + K + + H + R + K + GG +L + + GL
Sbjct: 231 TVLLLANAFHKKLEDRKW-----HSMASLTCIR---KNSKPWQGGRSMLETIKKGGVNGL 282
Query: 273 SGQVQFNQDRNIVSRGYDVINIDKME-----IHRVGYW 305
+G+++F ++ + ++++ + E I ++G W
Sbjct: 283 TGELEFAENGGNPNVHFEILGTNYGEDLGRGIRKLGCW 320
>UNIPROTKB|F1LTY2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 GeneTree:ENSGT00590000083056
IPI:IPI00231400 Ensembl:ENSRNOT00000042581 ArrayExpress:F1LTY2
Uniprot:F1LTY2
Length = 834
Score = 175 (66.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 123/563 (21%), Positives = 222/563 (39%)
Query: 56 EVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVY 115
+ + + +D G + L + K+ + LP N+ D LL K Y
Sbjct: 132 KTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFY 187
Query: 116 VVH-VSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VG 172
V+ S + I + MMT Y + T TL+ F+ L GV G
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTG 240
Query: 173 LRQHTPDSIPKKAFLSRWS--GMQ-----QKGLVSAGLNTYGLYAYDTVWAVARSIDKFI 225
R D+ + + +WS +Q + GL+ + T YD V+ VA
Sbjct: 241 FRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA------- 293
Query: 226 NEHNITFSASHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQDRN 283
ASH + +Q + K + G F+ L K + + GL+G++ FN+
Sbjct: 294 -------IASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNKTDG 346
Query: 284 IVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPG--G 341
+ + +D+ I E +G+ E G+ H WK I W G
Sbjct: 347 L-RKDFDLDIISLKE--------EGT-------EKASGEVSKHLYKVWKKIGI-WNSNSG 389
Query: 342 KTETP----RGWVIADNA--RPLRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEA 392
T R I D+ R L + +V + + + + + +GYC+D+L E
Sbjct: 390 LNMTDGNRDRSNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKEL 449
Query: 393 LKLVP--YDVPYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQ 449
++ YDV + +G ++G+VK + + D AV + I R K++DFS+
Sbjct: 450 SNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 509
Query: 450 PYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRG 508
P+++ G+ ++ N + FL P + ++W + + ++ V++++ ++
Sbjct: 510 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYN 569
Query: 509 P----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSY 556
P P + T+ F F L + E +L R I SSY
Sbjct: 570 PHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSY 629
Query: 557 TASLSSILTVQQLSTSVKGIESL 579
TA+L++ LTV+++ + + + L
Sbjct: 630 TANLAAFLTVERMESPIDSADDL 652
Score = 127 (49.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 63/259 (24%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 567 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 626
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 627 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 685
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q+S L+ S E +R L A++ E ++ + IG
Sbjct: 686 FMSSRQQSALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 738
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 739 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 796
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 797 NIGGIFIVLAAGLVLSVFV 815
Score = 120 (47.3 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 69/288 (23%), Positives = 115/288 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ + ++I + A+ DL+ +Y WK V +Y
Sbjct: 80 VQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 138
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L + K+ + LP N+ D LL K YV+ S
Sbjct: 139 -EDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFYVIFDCS 193
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQH 176
+ I + MMT Y + T D + LE +S +N T R+L + H
Sbjct: 194 HETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NPH 250
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
SI +K + R + GL+ + T YD V+ VA A
Sbjct: 251 V-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IA 295
Query: 235 SHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQ 280
SH + +Q + K + G F+ L K + + GL+G++ FN+
Sbjct: 296 SHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNK 343
>UNIPROTKB|F1Q0E7 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 OMA:LLPWICQ EMBL:AAEX03002913
EMBL:AAEX03002914 EMBL:AAEX03002915 EMBL:AAEX03002916
Ensembl:ENSCAFT00000025292 Uniprot:F1Q0E7
Length = 768
Score = 176 (67.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 60/232 (25%), Positives = 105/232 (45%)
Query: 380 KVQGYCIDILLEALKLV--PYDVPYKFE--LFGDGLSNPSYDGLVKMVANDVFDAAVGDI 435
+ +G+ ID+L K + Y++ Y+ +G L N S++G++ + + D A+ I
Sbjct: 221 RYKGFSIDVLDALAKALGFKYEI-YQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAI 279
Query: 436 AIVTNRTKIVDFSQPYI--STGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
I R +VDFS+ Y+ S G++I P K S + PF +W AA+ ++ V
Sbjct: 280 TITPERESVVDFSKRYMDYSVGILIKKP--EEKISIFSLFAPFDFAVWACIAAAIPVVGV 337
Query: 494 VIWILEH--RVNDDFRGPPRRQI-ATM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXX 546
+I++L V PR AT+ + + E++V+S+ R
Sbjct: 338 LIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWW 397
Query: 547 XXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSY 597
+ SSYTA+L++ LTV ++ ++ + L D G S Y Y
Sbjct: 398 LFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVDISYGTVRDSAVYEY 449
Score = 123 (48.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 58/232 (25%), Positives = 94/232 (40%)
Query: 531 EATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGY 588
E++V+S+ R + SSYTA+L++ LTV ++ ++ + L D G
Sbjct: 381 ESSVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVDISYGT 440
Query: 589 QVGSFAYSYL---------SDSLRIQKSRLISL-GSPEDYERALRQGPRNG--GVAAIVD 636
S Y Y DS + R IS G ++ + +G R G A +
Sbjct: 441 VRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSSPSEGIRKAKKGSYAFLW 500
Query: 637 ELPYVQLFLSNQTDFGII--GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLH 694
++ V+ D + G + G+G A Q SP S IL+L + G L L
Sbjct: 501 DVAVVEYAALTDDDCSVTVTGNSVSSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLK 560
Query: 695 EKWFCKEG-CP--EERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFLLRM 743
+KW+ G C ++ L+L SF G++ + A LV L +
Sbjct: 561 QKWWPHMGRCDLTSPASAQADGKSLKLHSFAGVFCILAIGLLLACLVAALEL 612
Score = 68 (29.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 195 QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVF 254
Q+G + L LY YD+V +A + + + + H + R + K +
Sbjct: 68 QEGYLQM-LQISNLYLYDSVLMLANAFHRKLEDRKW-----HSMASLNCIR---KSTKPW 118
Query: 255 DGGTFLLRKLLQTNFTGLSGQVQFNQD 281
+GG +L + + + TGL+G ++F +D
Sbjct: 119 NGGRSMLDTIKKGHITGLTGVMEFRED 145
>UNIPROTKB|F1M4T4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00947926
ProteinModelPortal:F1M4T4 Ensembl:ENSRNOT00000065613
ArrayExpress:F1M4T4 Uniprot:F1M4T4
Length = 883
Score = 175 (66.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 123/563 (21%), Positives = 222/563 (39%)
Query: 56 EVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVY 115
+ + + +D G + L + K+ + LP N+ D LL K Y
Sbjct: 132 KTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFY 187
Query: 116 VVH-VSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VG 172
V+ S + I + MMT Y + T TL+ F+ L GV G
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTG 240
Query: 173 LRQHTPDSIPKKAFLSRWS--GMQ-----QKGLVSAGLNTYGLYAYDTVWAVARSIDKFI 225
R D+ + + +WS +Q + GL+ + T YD V+ VA
Sbjct: 241 FRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA------- 293
Query: 226 NEHNITFSASHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQDRN 283
ASH + +Q + K + G F+ L K + + GL+G++ FN+
Sbjct: 294 -------IASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNKTDG 346
Query: 284 IVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPG--G 341
+ + +D+ I E +G+ E G+ H WK I W G
Sbjct: 347 L-RKDFDLDIISLKE--------EGT-------EKASGEVSKHLYKVWKKIGI-WNSNSG 389
Query: 342 KTETP----RGWVIADNA--RPLRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEA 392
T R I D+ R L + +V + + + + + +GYC+D+L E
Sbjct: 390 LNMTDGNRDRSNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKEL 449
Query: 393 LKLVP--YDVPYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQ 449
++ YDV + +G ++G+VK + + D AV + I R K++DFS+
Sbjct: 450 SNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 509
Query: 450 PYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRG 508
P+++ G+ ++ N + FL P + ++W + + ++ V++++ ++
Sbjct: 510 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYN 569
Query: 509 P----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSY 556
P P + T+ F F L + E +L R I SSY
Sbjct: 570 PHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSY 629
Query: 557 TASLSSILTVQQLSTSVKGIESL 579
TA+L++ LTV+++ + + + L
Sbjct: 630 TANLAAFLTVERMESPIDSADDL 652
Score = 127 (49.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 63/259 (24%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 567 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 626
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 627 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 685
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q+S L+ S E +R L A++ E ++ + IG
Sbjct: 686 FMSSRQQSALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 738
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 739 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 796
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 797 NIGGIFIVLAAGLVLSVFV 815
Score = 120 (47.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 69/288 (23%), Positives = 115/288 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ + ++I + A+ DL+ +Y WK V +Y
Sbjct: 80 VQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 138
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L + K+ + LP N+ D LL K YV+ S
Sbjct: 139 -EDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFYVIFDCS 193
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQH 176
+ I + MMT Y + T D + LE +S +N T R+L + H
Sbjct: 194 HETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NPH 250
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
SI +K + R + GL+ + T YD V+ VA A
Sbjct: 251 V-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IA 295
Query: 235 SHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQ 280
SH + +Q + K + G F+ L K + + GL+G++ FN+
Sbjct: 296 SHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNK 343
>UNIPROTKB|F1M5R4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951831
Ensembl:ENSRNOT00000066006 ArrayExpress:F1M5R4 Uniprot:F1M5R4
Length = 912
Score = 175 (66.7 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 123/563 (21%), Positives = 222/563 (39%)
Query: 56 EVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVY 115
+ + + +D G + L + K+ + LP N+ D LL K Y
Sbjct: 132 KTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFY 187
Query: 116 VVH-VSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VG 172
V+ S + I + MMT Y + T TL+ F+ L GV G
Sbjct: 188 VIFDCSHETAAEILKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTG 240
Query: 173 LRQHTPDSIPKKAFLSRWS--GMQ-----QKGLVSAGLNTYGLYAYDTVWAVARSIDKFI 225
R D+ + + +WS +Q + GL+ + T YD V+ VA
Sbjct: 241 FRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA------- 293
Query: 226 NEHNITFSASHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQDRN 283
ASH + +Q + K + G F+ L K + + GL+G++ FN+
Sbjct: 294 -------IASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNKTDG 346
Query: 284 IVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPG--G 341
+ + +D+ I E +G+ E G+ H WK I W G
Sbjct: 347 L-RKDFDLDIISLKE--------EGT-------EKASGEVSKHLYKVWKKIGI-WNSNSG 389
Query: 342 KTETP----RGWVIADNA--RPLRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEA 392
T R I D+ R L + +V + + + + + +GYC+D+L E
Sbjct: 390 LNMTDGNRDRSNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKEL 449
Query: 393 LKLVP--YDVPYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQ 449
++ YDV + +G ++G+VK + + D AV + I R K++DFS+
Sbjct: 450 SNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 509
Query: 450 PYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRG 508
P+++ G+ ++ N + FL P + ++W + + ++ V++++ ++
Sbjct: 510 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYN 569
Query: 509 P----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSY 556
P P + T+ F F L + E +L R I SSY
Sbjct: 570 PHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSY 629
Query: 557 TASLSSILTVQQLSTSVKGIESL 579
TA+L++ LTV+++ + + + L
Sbjct: 630 TANLAAFLTVERMESPIDSADDL 652
Score = 127 (49.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 63/259 (24%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 567 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 626
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 627 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 685
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q+S L+ S E +R L A++ E ++ + IG
Sbjct: 686 FMSSRQQSALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 738
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 739 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 796
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 797 NIGGIFIVLAAGLVLSVFV 815
Score = 120 (47.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 69/288 (23%), Positives = 115/288 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ + ++I + A+ DL+ +Y WK V +Y
Sbjct: 80 VQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 138
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L + K+ + LP N+ D LL K YV+ S
Sbjct: 139 -EDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFYVIFDCS 193
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQH 176
+ I + MMT Y + T D + LE +S +N T R+L + H
Sbjct: 194 HETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NPH 250
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
SI +K + R + GL+ + T YD V+ VA A
Sbjct: 251 V-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IA 295
Query: 235 SHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQ 280
SH + +Q + K + G F+ L K + + GL+G++ FN+
Sbjct: 296 SHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNK 343
>UNIPROTKB|P19439 [details] [associations]
symbol:KBP "Probable glutamate receptor" species:9031
"Gallus gallus" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 EMBL:X17700 IPI:IPI00597968 PIR:S07062
RefSeq:NP_990684.1 UniGene:Gga.42516 ProteinModelPortal:P19439
Ensembl:ENSGALT00000001776 GeneID:396300 KEGG:gga:396300
CTD:100002194 eggNOG:NOG241927 GeneTree:ENSGT00700000104113
HOGENOM:HOG000234371 HOVERGEN:HBG104989 InParanoid:P19439
OMA:YLRSKWW OrthoDB:EOG43FGX0 NextBio:20816350 Uniprot:P19439
Length = 487
Score = 190 (71.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 81/367 (22%), Positives = 153/367 (41%)
Query: 378 SHKVQGYCIDILLEALKLVPYDVPYKFELFGD-GLSNPS--YDGLVKMVANDVFDAAVGD 434
S +++GYCID+L ++ + K G G +PS + G++ + D AV
Sbjct: 64 SAELEGYCIDLLKALASMLHFSYKVKVVGDGKYGAISPSGNWTGMIGEILRQEADIAVAP 123
Query: 435 IAIVTNRTKIVDFSQPYISTGLVIVAPIN--NHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ + + R ++V F+ P++ TG+ I+ + + S + FL PF+ E W ++V+
Sbjct: 124 LTVTSAREEVVSFTTPFLQTGIGILLRKETISQEMSFFHFLAPFSKETWTGLLFAYVLTC 183
Query: 493 VVIWILEHRVNDDFRGPPRRQIATMFLFS--FSTLFKTNQEATVSSLG---RXXXXXXXX 547
V ++++ ++ P + FL S F T Q T R
Sbjct: 184 VCLFLVARLSPCEWNEPKNEENHFTFLNSLWFGAGALTLQGVTPRPKAFSVRVIAAIWWL 243
Query: 548 XXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYLSDSLR-IQ 605
+ ++Y A+ +++L+ S++ E L+ G GS + + +S I
Sbjct: 244 FTIALLAAYIANFTALLSSGSEQLSIQTFEDLVKQRKLEFGTLDGSSTFYFFKNSKNPIH 303
Query: 606 KSRLISLGSPED------YERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
+ + D Y+ A+++ + A + E L + + +
Sbjct: 304 RMVYEYMDKRRDHVLVKTYQEAVQRVMESN--YAFIGESISQDLAAARHCNLIRAPEVIG 361
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G A + SP +S A+LKL E G L L KW+ + C + R+ P Q + +
Sbjct: 362 ARGFGIATAQASPWTKKLSVAVLKLRETGDLDYLRNKWW-ESSCLHKSREGWSPLQPQAL 420
Query: 720 SFWGLYL 726
GL+L
Sbjct: 421 G--GLFL 425
>WB|WBGene00001616 [details] [associations]
symbol:glr-5 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HSSP:P19491
EMBL:FO080218 PIR:T25941 RefSeq:NP_505244.1
ProteinModelPortal:O01623 SMR:O01623 STRING:O01623
EnsemblMetazoa:ZC196.7 GeneID:179251 KEGG:cel:CELE_ZC196.7
UCSC:ZC196.7 CTD:179251 WormBase:ZC196.7 HOGENOM:HOG000016348
InParanoid:O01623 OMA:IFRERED NextBio:904564 ArrayExpress:O01623
Uniprot:O01623
Length = 932
Score = 146 (56.5 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 40/167 (23%), Positives = 85/167 (50%)
Query: 342 KTETPRGWVIADNARP-LRIGVPRRASFVGFVTEEH---DSH-KVQGYCIDILLEALKLV 396
K + R ++D +P R+ +V + + H D++ K +G+CID+L E K +
Sbjct: 422 KAQLQRNVQVSDELKPHFRVTTIMERPYV-MLKKNHYELDANSKFEGFCIDLLAELSKDL 480
Query: 397 --PYDV-PYKFELFG-DGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYI 452
Y + K +G D N S+DG++ + + AV + + R++ VDF++P++
Sbjct: 481 GFTYTIHAVKDGKYGNDKYGNGSWDGMMGEILRGEAEMAVAPLTVNYRRSEAVDFTKPFL 540
Query: 453 STGLVIVAPI-NNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWIL 498
S G+ I+ + ++ + + FL P + ++W A S + + + ++ +
Sbjct: 541 SLGISILYKVPDDQQPDLFSFLNPLSWQIWTAIATSIITVTLGMYFV 587
Score = 100 (40.3 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 51/218 (23%), Positives = 93/218 (42%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI 604
I S+YTA+L+++LTV + +K ++ L N I Y GS F S ++ +++
Sbjct: 668 IISAYTANLAAVLTVSRPYIPIKNLDDL-ANQTTISYGTIRGGSTMQFFQESRIAAHVKM 726
Query: 605 ---QKSRLISLGSP-EDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFG-IIGQPFT 659
K + + + S + ERAL N L Y N T G ++G
Sbjct: 727 WQYMKDKDVFVTSNGKGVERALSM---NYAYLMESTSLEYETQQNCNLTQIGGVLGS--- 780
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G A + S +S IL ++ G+++ KW+ +G + H +
Sbjct: 781 -KGYGIALAKKSEWTDRISRQILLYAKRGIIEMKKTKWWRSKGAACASTASAVKHDRFAL 839
Query: 720 SFW---GLYLLCGTITFTAFLVFLLRMV--CQYVRYKQ 752
S + GL++ G A +V + ++ C ++ K+
Sbjct: 840 SMYNVAGLFITLGVGIVLAAIVVIFELIHRCHHIAKKE 877
Score = 46 (21.3 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 40 QQMAAMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLE-KNMAKVSYKL 89
Q A+ D+ + W ++ +Y D+ I L +LE + A + + L
Sbjct: 136 QLFEAVVDMFTHWRWNRIVLVYEGDER----IRRLEQLLESEEYASIRFYL 182
>UNIPROTKB|G3V186 [details] [associations]
symbol:GRID1 "Glutamate receptor, ionotropic, delta 1,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0035235 EMBL:CH471142 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 UniGene:Hs.530653 HGNC:HGNC:4575 EMBL:AL844892
EMBL:AC022028 EMBL:AC073162 EMBL:AC079955 EMBL:AL451059
EMBL:AL596135 EMBL:AL683834 EMBL:AL732479 SMR:G3V186
Ensembl:ENST00000464741 Uniprot:G3V186
Length = 755
Score = 174 (66.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 59/232 (25%), Positives = 105/232 (45%)
Query: 380 KVQGYCIDILLEALKLV--PYDVPYKFE--LFGDGLSNPSYDGLVKMVANDVFDAAVGDI 435
+ +G+ ID+L K + Y++ Y+ +G L N S++G++ + + D A+ I
Sbjct: 462 RYKGFSIDVLDALAKALGFKYEI-YQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAI 520
Query: 436 AIVTNRTKIVDFSQPYI--STGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
I R +VDFS+ Y+ S G++I P K S + PF +W AA+ ++ V
Sbjct: 521 TITPERESVVDFSKRYMDYSVGILIKKP--EEKISIFSLFAPFDFAVWACIAAAIPVVGV 578
Query: 494 VIWILEH--RVNDDFRGPPRRQI-ATM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXX 546
+I++L V PR AT+ + + E++V+S+ R
Sbjct: 579 LIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWW 638
Query: 547 XXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSY 597
+ SSYTA+L++ LTV ++ ++ + L + G S Y Y
Sbjct: 639 LFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEY 690
Score = 68 (29.0 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 195 QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVF 254
Q+G + L LY YD+V +A + + + + H + R + K +
Sbjct: 309 QEGYLQM-LQISNLYLYDSVLMLANAFHRKLEDRKW-----HSMASLNCIR---KSTKPW 359
Query: 255 DGGTFLLRKLLQTNFTGLSGQVQFNQD 281
+GG +L + + + TGL+G ++F +D
Sbjct: 360 NGGRSMLDTIKKGHITGLTGVMEFRED 386
>UNIPROTKB|F1M7M9 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0051967 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0048266 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0032230 GO:GO:0060080 GO:GO:0035249
GO:GO:0030534 InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 IPI:IPI00231402 GeneTree:ENSGT00590000083056
OMA:KELIDHR ProteinModelPortal:F1M7M9 Ensembl:ENSRNOT00000050073
ArrayExpress:F1M7M9 Uniprot:F1M7M9
Length = 951
Score = 173 (66.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 123/563 (21%), Positives = 221/563 (39%)
Query: 56 EVIAIYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVY 115
+ + + +D G + L + K+ + LP N+ D LL K Y
Sbjct: 171 KTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFY 226
Query: 116 VVH-VSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV--VG 172
V+ S + I + MMT Y + T TL+ F+ L GV G
Sbjct: 227 VIFDCSHETAAEILKQILFMGMMTEYYHYFFT-----TLDLFAL--DLELYRYSGVNMTG 279
Query: 173 LRQHTPDSIPKKAFLSRWS--GMQ-----QKGLVSAGLNTYGLYAYDTVWAVARSIDKFI 225
R D+ + + +WS +Q + GL+ + T YD V+ VA
Sbjct: 280 FRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA------- 332
Query: 226 NEHNITFSASHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQDRN 283
ASH + +Q + K + G F+ L K + GL+G++ FN+
Sbjct: 333 -------IASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEATARWDGLTGRITFNKTDG 385
Query: 284 IVSRGYDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPG--G 341
+ + +D+ I E +G+ E G+ H WK I W G
Sbjct: 386 L-RKDFDLDIISLKE--------EGT-------EKASGEVSKHLYKVWKKIGI-WNSNSG 428
Query: 342 KTETP----RGWVIADNA--RPLRIGVPRRASFVGFVTEE---HDSHKVQGYCIDILLEA 392
T R I D+ R L + +V + + + + + +GYC+D+L E
Sbjct: 429 LNMTDGNRDRSNNITDSLANRTLIVTTILEEPYVMYRKSDKPLYGNDRFEGYCLDLLKEL 488
Query: 393 LKLVP--YDVPYKFE-LFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQ 449
++ YDV + +G ++G+VK + + D AV + I R K++DFS+
Sbjct: 489 SNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSK 548
Query: 450 PYISTGL-VIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRG 508
P+++ G+ ++ N + FL P + ++W + + ++ V++++ ++
Sbjct: 549 PFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYN 608
Query: 509 P----PRRQIA----TM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSY 556
P P + T+ F F L + E +L R I SSY
Sbjct: 609 PHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSY 668
Query: 557 TASLSSILTVQQLSTSVKGIESL 579
TA+L++ LTV+++ + + + L
Sbjct: 669 TANLAAFLTVERMESPIDSADDL 691
Score = 127 (49.8 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 63/259 (24%), Positives = 100/259 (38%)
Query: 496 WILEHRVNDDFRGPPRR-QIATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXIT 553
W H N D + F F L + E +L R I
Sbjct: 606 WYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIII 665
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV---GS----FAYSYLSDSLRI-- 604
SSYTA+L++ LTV+++ + + + L I Y GS F S +S ++
Sbjct: 666 SSYTANLAAFLTVERMESPIDSADDL-AKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWA 724
Query: 605 -----QKSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFT 659
Q+S L+ S E +R L A++ E ++ + IG
Sbjct: 725 FMSSRQQSALVK-NSDEGIQRVLTTD------YALLMESTSIEYVTQRNCNLTQIGGLID 777
Query: 660 RSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLI 719
G+G SP ++ AIL+L E G L + EKW+ GCPEE E L +
Sbjct: 778 SKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEE--DSKEASALGVE 835
Query: 720 SFWGLYL-LCGTITFTAFL 737
+ G+++ L + + F+
Sbjct: 836 NIGGIFIVLAAGLVLSVFV 854
Score = 118 (46.6 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 69/288 (23%), Positives = 114/288 (39%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIY 61
+ + N L+VP + P++ + ++I + A+ DL+ +Y WK V +Y
Sbjct: 119 VQSICNALEVPHIQTRWKHPSVDSRDL-FYINLYPDYAAISRAVLDLVLYYNWKTVTVVY 177
Query: 62 VDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVH-VS 120
+D G + L + K+ + LP N+ D LL K YV+ S
Sbjct: 178 -EDSTGLIRLQELIKAPSRYNIKIKIR-QLPPA-NK-DAKPLLKEMKK-SKEFYVIFDCS 232
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLAT--DWLSATLE--SFSKMNQTSLRILQGVVGLRQH 176
+ I + MMT Y + T D + LE +S +N T R+L + H
Sbjct: 233 HETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVNMTGFRLLN--ID-NPH 289
Query: 177 TPDSIPKKAFLSRWSG--MQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSA 234
SI +K + R + GL+ + T YD V+ VA A
Sbjct: 290 V-SSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA--------------IA 334
Query: 235 SHELPDSKATRVQLEQLKVFD-GGTFL-LRKLLQTNFTGLSGQVQFNQ 280
SH + +Q + K + G F+ L K + GL+G++ FN+
Sbjct: 335 SHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEATARWDGLTGRITFNK 382
>WB|WBGene00003775 [details] [associations]
symbol:nmr-2 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:Z78413
GO:GO:0005234 GO:GO:0004970 GeneTree:ENSGT00540000070221
EMBL:Z81061 GeneID:180002 KEGG:cel:CELE_T01C3.10 CTD:180002
EMBL:AF318614 RefSeq:NP_001256640.1 ProteinModelPortal:G5EEH3
SMR:G5EEH3 EnsemblMetazoa:T01C3.10a WormBase:T01C3.10a OMA:DANCALM
Uniprot:G5EEH3
Length = 990
Score = 159 (61.0 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 49/213 (23%), Positives = 94/213 (44%)
Query: 383 GYCIDILLEALKLVPYDVP-YKF--ELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVT 439
GYC+D+L + + + YK E +G N ++GL+ + ++ D V + + +
Sbjct: 519 GYCVDLLNKLANDIGFTYTLYKVRDEKWGLKTEN-GWNGLIADLMHNKADMCVTSLKLNS 577
Query: 440 NRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMW------CVTAASFVMIAV 493
R + +DFS P++ TG+ I+ I + S FL+PF W C+ A+ + I +
Sbjct: 578 ERARDIDFSLPFLDTGISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCIHVAA-ISIFL 636
Query: 494 VIWILEHRVNDDFRGPPRRQIATM--FLFSFSTLFKTNQEATV--SSLGRXXXXXXXXXX 549
W+ + N PP + + + ++TLF + V S++ R
Sbjct: 637 FEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFG 696
Query: 550 XXITSSYTASLSSILTVQQLSTSVKGIESLITN 582
+ YTA+L++ + + + GI + N
Sbjct: 697 LTFLAVYTANLAAFMITRVQYYDLSGIHDPMLN 729
Score = 103 (41.3 bits), Expect = 3.2e-05, Sum P(3) = 3.2e-05
Identities = 53/302 (17%), Positives = 122/302 (40%)
Query: 468 SAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATM--FLFSFSTL 525
S WV + F C+ A+ + I + W+ + N PP + + + ++TL
Sbjct: 617 STWVIIL-FV----CIHVAA-ISIFLFEWVSPYSFNMQKYPPPEHKFSLFRSYWLVWATL 670
Query: 526 FKTNQEATV--SSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN- 582
F + V S++ R + YTA+L++ + + + GI + N
Sbjct: 671 FSASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTANLAAFMITRVQYYDLSGIHDPMLNF 730
Query: 583 --DWPIGYQVGSFAYSYLSDSLRIQKSRLISLGSPEDYER----ALRQGPRNGGVAAIVD 636
D ++ G+ ++++ ++ Y R A + +N + A +
Sbjct: 731 PHDQKPPFRFGTVDGGNTHETMKRNWHKMHEYVKHNKYFRMNISAGIEAVKNEELDAFIY 790
Query: 637 ELPYVQLFLSNQTDFGI--IGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLH 694
+ + + + + +G+ + +G+G F ++SP ++ +L+ + G L++L
Sbjct: 791 DAVVLDYWAGKDANCALMTVGKWASMTGYGIGFPKNSPHTSLVNHYMLQYQQKGDLERLQ 850
Query: 695 EKWFCKEGCPEERRQHSEPHQLRLISFWGLY-LLCGTITFTAFLVFLLRMVCQYVRYKQQ 753
W P+ Q ++ L + +F + LL G I + ++ + C ++R Q
Sbjct: 851 NFWLTGACTPDSHSQ-TQSAPLGIENFLSAFVLLAGGIIVSVIVLGFEHIYCMHLRKPLQ 909
Query: 754 QM 755
++
Sbjct: 910 KI 911
Score = 77 (32.2 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 33/152 (21%), Positives = 66/152 (43%)
Query: 11 VPLVSFAATDP--TLSALQFPY-FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYG 67
+P++++ A + T PY I+ Q AM L+ Y W + + + G
Sbjct: 148 IPIIAWNADNAGFTFENDLGPYRIIQMAPPIEHQARAMLALLRRYNWPK-FGVVTSEMAG 206
Query: 68 RNG-ISALSNMLEKNMAKVSYKLPLPVQF------NQHDITVLLNNSKPLGPRVYVVHVS 120
+ ++A+ LE K S K + + F N D+ + L + K ++ +++ +
Sbjct: 207 NDRFVTAIREELELFSNK-STKFEM-IHFSHMNTKNDTDVDLKLADVKKNQAKIILLYAN 264
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLATDWLSAT 152
IF+ A+K+ M+ Y+W+ T + T
Sbjct: 265 AAQAGTIFSHAEKMDMIGEKYLWIGTQSVKGT 296
Score = 53 (23.7 bits), Expect = 4.2e-11, Sum P(3) = 4.2e-11
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 332 KLQNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQG 383
K+ ++ WPG K P+G AD +++ F+ + D+ K G
Sbjct: 440 KMADVQWPGEKANPPQG--AADKFH-VKVVTLHEPPFIAVSDVDPDTQKCPG 488
>RGD|68366 [details] [associations]
symbol:Grid1 "glutamate receptor, ionotropic, delta 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918
Pfam:PF01094 RGD:68366 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 CTD:2894 eggNOG:NOG276334
HOVERGEN:HBG051840 KO:K05206 EMBL:U08255 EMBL:Z17238 IPI:IPI00207091
RefSeq:NP_077354.1 UniGene:Rn.10040 ProteinModelPortal:Q62640
SMR:Q62640 MINT:MINT-257777 STRING:Q62640 PhosphoSite:Q62640
PRIDE:Q62640 GeneID:79219 KEGG:rno:79219 UCSC:RGD:68366
ChEMBL:CHEMBL1681629 NextBio:614636 Genevestigator:Q62640
Uniprot:Q62640
Length = 1009
Score = 175 (66.7 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 60/232 (25%), Positives = 106/232 (45%)
Query: 380 KVQGYCIDILLEALKLV--PYDVPYKFE--LFGDGLSNPSYDGLVKMVANDVFDAAVGDI 435
+ +G+ ID+L K + Y++ Y+ +G L N S++G++ + + D A+ I
Sbjct: 462 RYKGFSIDVLDALAKALGFKYEI-YQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAI 520
Query: 436 AIVTNRTKIVDFSQPYI--STGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
I R +VDFS+ Y+ S G++I P K S + PF +W AA+ ++ V
Sbjct: 521 TITPERESVVDFSKRYMDYSVGILIKKP--EEKISIFSLFAPFDFAVWACIAAAIPVVGV 578
Query: 494 VIWILEH--RVNDDFRGPPRRQI-ATM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXX 546
+I++L V PR AT+ + + E++V+S+ R
Sbjct: 579 LIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQGGESSVNSVAMRIVMGSWW 638
Query: 547 XXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSY 597
+ SSYTA+L++ LTV ++ + V+ + L + G S Y Y
Sbjct: 639 LFTLIVCSSYTANLAAFLTVSRMDSPVRTFQDLSKQLEMSYGTVRDSAVYEY 690
Score = 126 (49.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 59/232 (25%), Positives = 95/232 (40%)
Query: 531 EATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGY 588
E++V+S+ R + SSYTA+L++ LTV ++ + V+ + L + G
Sbjct: 622 ESSVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDSPVRTFQDLSKQLEMSYGT 681
Query: 589 QVGSFAYSYL---------SDSLRIQKSRLISL-GSPEDYERALRQGPRNG--GVAAIVD 636
S Y Y DS + R IS G ++ +G R G A +
Sbjct: 682 VRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLW 741
Query: 637 ELPYVQLFLSNQTDFGI--IGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLH 694
++ V+ D + IG + G+G A Q SP S IL+L + G L L
Sbjct: 742 DVAVVEYAALTDDDCSVTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLK 801
Query: 695 EKWFCKEG-CP--EERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFLLRM 743
+KW+ G C ++ L+L SF G++ + A LV L +
Sbjct: 802 QKWWPHTGRCDLTSHSSAQTDGKSLKLHSFAGVFCILAIGLLLACLVAALEL 853
Score = 68 (29.0 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 195 QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVF 254
Q+G + L LY YD+V +A + + + + H + R + K +
Sbjct: 309 QEGYLQM-LQISNLYLYDSVLMLANAFHRKLEDRKW-----HSMASLNCIR---KSTKPW 359
Query: 255 DGGTFLLRKLLQTNFTGLSGQVQFNQD 281
+GG +L + + + TGL+G ++F +D
Sbjct: 360 NGGRSMLDTIKKGHITGLTGVMEFRED 386
>UNIPROTKB|F1M6H8 [details] [associations]
symbol:F1M6H8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000337 PRINTS:PR00248 Pfam:PF01094
GO:GO:0016021 GO:GO:0004930 InterPro:IPR001828 IPI:IPI00782640
ProteinModelPortal:F1M6H8 Ensembl:ENSRNOT00000057634 OMA:NIFRTIP
Uniprot:F1M6H8
Length = 474
Score = 186 (70.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 52/191 (27%), Positives = 95/191 (49%)
Query: 2 ISEVANGLKVPLVSFAATDPTLS-ALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
+S + +P V +A++ P LS +QFP R+ SD Q A+ +LI +GW V AI
Sbjct: 167 VSRILGDYYIPQVGYASSSPILSDRIQFPNIFRTIPSDKFQSEAIVNLIRHFGWVWVGAI 226
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS 120
DDDYG++G+ +L +E + +++ +P ++ + + +N K +V V++ +
Sbjct: 227 ATDDDYGKHGVKSLRKKMELSNLCIAFSETIPKVYSNEKMQIAVNEVKKSTAKVIVLYAT 286
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLATD-WLSATLES----FSKMNQT-SLRILQGVV-GL 173
D L F +T+ W+A++ W+++ L + F T I + V+ GL
Sbjct: 287 -DIHLSPFVLEVVHHNITDR-TWIASEAWITSALIAKPGYFPYFGGTIGFAIPRSVIPGL 344
Query: 174 RQHTPDSIPKK 184
++ D P K
Sbjct: 345 KEFLYDVHPSK 355
>WB|WBGene00001618 [details] [associations]
symbol:glr-7 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0019915 GO:GO:0040039 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 EMBL:FO080845 RefSeq:NP_508441.3
ProteinModelPortal:Q18591 SMR:Q18591 PaxDb:Q18591
EnsemblMetazoa:C43H6.9 GeneID:180547 KEGG:cel:CELE_C43H6.9
UCSC:C43H6.9 CTD:180547 WormBase:C43H6.9 eggNOG:NOG315397
HOGENOM:HOG000016613 InParanoid:Q18591 OMA:YENTAFQ NextBio:909824
ArrayExpress:Q18591 Uniprot:Q18591
Length = 671
Score = 158 (60.7 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 58/244 (23%), Positives = 109/244 (44%)
Query: 382 QGYCIDIL--LEALKLVPYDVPYKFE--LFGDGLSNPSYDGLVKMVANDVFDAAVGDIAI 437
+GYCID++ ++ Y + Y+ E FG N +++GL+ + + D A+ +++
Sbjct: 182 EGYCIDLINMIQVEVNFTYTI-YEVEDGSFGTMDDNGNWNGLIGALVSGSADIALAPLSV 240
Query: 438 VTNRTKIVDFSQPYIS-TGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIW 496
+ R VDF+ PY G I+ + + S + F+K +W A+++ ++++W
Sbjct: 241 MAERENDVDFTVPYYDLVGTTILMKKADVEYSLFKFMKVLEWPVWLCIVAAYLFTSILLW 300
Query: 497 ILEHR-----VNDDFRGP---PRRQIATMFLFSFSTLFKTNQ---EATVSSLGRXXXXXX 545
I + N+ R +RQ + F T Q EA + GR
Sbjct: 301 IFDRFSPYSFTNNKERYQNDIEKRQFSLKECLWFCMTSLTPQGGGEAPKNISGRLVAATW 360
Query: 546 XXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGYQV--GSFAYSYLSDSLR 603
I +SYTA+L++ LTV +L + ++ L + I Y GS + +Y
Sbjct: 361 WLFGFIIIASYTANLAAFLTVSRLEQPISSLDDL-AKQYKIEYAPIKGSASETYFRRMAE 419
Query: 604 IQKS 607
I+++
Sbjct: 420 IEET 423
Score = 80 (33.2 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 38/166 (22%), Positives = 65/166 (39%)
Query: 630 GVAAIVD--ELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSEN 687
G A I D E+ Y L N +G F+R + A Q L +S+AIL L
Sbjct: 485 GFAFIGDATEIKYAALTNCNLQQ---VGTEFSRKPYAIAVQSGHILKDKISSAILMLLNE 541
Query: 688 GMLQKLHEKWFC----KEGCPEERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFLLRM 743
L+ L EKW+ K CP+ E + + + G+++ + + ++ +
Sbjct: 542 RRLETLKEKWWTDNPNKVSCPDSS---DESDGISIQNIGGVFI----VILAGIALSIVTL 594
Query: 744 VCQYVRYKQQQMXXXXXXXXXXXXTRYSKAVFNFFDFIDEKEEAIK 789
+Y YK++ + + V N F K++A K
Sbjct: 595 AFEYYYYKRKARKAAEKEQEELEMKQSQQVVPNGFHTNGVKQDAPK 640
>UNIPROTKB|Q9ULK0 [details] [associations]
symbol:GRID1 "Glutamate receptor ionotropic, delta-1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 DrugBank:DB00142 GO:GO:0030288 EMBL:CH471142
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AK127168
EMBL:BC039263 EMBL:AB033046 IPI:IPI00374337 RefSeq:NP_060021.1
UniGene:Hs.530653 ProteinModelPortal:Q9ULK0 SMR:Q9ULK0
STRING:Q9ULK0 PhosphoSite:Q9ULK0 DMDM:38372397 PaxDb:Q9ULK0
PRIDE:Q9ULK0 Ensembl:ENST00000327946 GeneID:2894 KEGG:hsa:2894
UCSC:uc001kdl.1 CTD:2894 GeneCards:GC10M087349 HGNC:HGNC:4575
MIM:610659 neXtProt:NX_Q9ULK0 PharmGKB:PA28970 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 InParanoid:Q9ULK0 KO:K05206
OMA:LLPWICQ PhylomeDB:Q9ULK0 BindingDB:Q9ULK0 ChEMBL:CHEMBL2936
GenomeRNAi:2894 NextBio:11451 ArrayExpress:Q9ULK0 Bgee:Q9ULK0
CleanEx:HS_GRID1 Genevestigator:Q9ULK0 GermOnline:ENSG00000182771
Uniprot:Q9ULK0
Length = 1009
Score = 174 (66.3 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 59/232 (25%), Positives = 105/232 (45%)
Query: 380 KVQGYCIDILLEALKLV--PYDVPYKFE--LFGDGLSNPSYDGLVKMVANDVFDAAVGDI 435
+ +G+ ID+L K + Y++ Y+ +G L N S++G++ + + D A+ I
Sbjct: 462 RYKGFSIDVLDALAKALGFKYEI-YQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAI 520
Query: 436 AIVTNRTKIVDFSQPYI--STGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
I R +VDFS+ Y+ S G++I P K S + PF +W AA+ ++ V
Sbjct: 521 TITPERESVVDFSKRYMDYSVGILIKKP--EEKISIFSLFAPFDFAVWACIAAAIPVVGV 578
Query: 494 VIWILEH--RVNDDFRGPPRRQI-ATM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXX 546
+I++L V PR AT+ + + E++V+S+ R
Sbjct: 579 LIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWW 638
Query: 547 XXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSY 597
+ SSYTA+L++ LTV ++ ++ + L + G S Y Y
Sbjct: 639 LFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEY 690
Score = 127 (49.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 58/232 (25%), Positives = 95/232 (40%)
Query: 531 EATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGY 588
E++V+S+ R + SSYTA+L++ LTV ++ ++ + L + G
Sbjct: 622 ESSVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGT 681
Query: 589 QVGSFAYSYL---------SDSLRIQKSRLISL-GSPEDYERALRQGPRNG--GVAAIVD 636
S Y Y DS + R IS G ++ + +G R G A +
Sbjct: 682 VRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLW 741
Query: 637 ELPYVQLFLSNQTDFGI--IGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLH 694
++ V+ D + IG + G+G A Q SP S IL+L + G L L
Sbjct: 742 DVAVVEYAALTDDDCSVTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLK 801
Query: 695 EKWFCKEG-CP--EERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFLLRM 743
+KW+ G C ++ L+L SF G++ + A LV L +
Sbjct: 802 QKWWPHMGRCDLTSHASAQADGKSLKLHSFAGVFCILAIGLLLACLVAALEL 853
Score = 68 (29.0 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 195 QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVF 254
Q+G + L LY YD+V +A + + + + H + R + K +
Sbjct: 309 QEGYLQM-LQISNLYLYDSVLMLANAFHRKLEDRKW-----HSMASLNCIR---KSTKPW 359
Query: 255 DGGTFLLRKLLQTNFTGLSGQVQFNQD 281
+GG +L + + + TGL+G ++F +D
Sbjct: 360 NGGRSMLDTIKKGHITGLTGVMEFRED 386
>ZFIN|ZDB-GENE-050419-220 [details] [associations]
symbol:v2ra20 "vomeronasal 2 receptor, a20"
species:7955 "Danio rerio" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000337 InterPro:IPR004073
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR01535
PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
ZFIN:ZDB-GENE-050419-220 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
InterPro:IPR001828 GeneTree:ENSGT00690000101821 EMBL:BX908736
IPI:IPI00773834 ProteinModelPortal:F1QD68
Ensembl:ENSDART00000050639 Uniprot:F1QD68
Length = 836
Score = 189 (71.6 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 96/377 (25%), Positives = 161/377 (42%)
Query: 1 MISEVANGLKVPLVSFAATDPTLS-ALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIA 59
++S ++P++S+ +T LS QFP F R SD Q+ A+A L+ + W +
Sbjct: 139 VVSRTLEPFRIPMISYFSTCSCLSDRKQFPTFFRVVPSDDYQVKAIAQLLKRFDWTWIGV 198
Query: 60 IYVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHV 119
+ D DYGR + L +E ++Y +P + Q + +L K +V VV
Sbjct: 199 VTEDHDYGRFALQGLKREIENTKICLAYHEMIPKDYTQERVLKILKVMKESTAKVVVVF- 257
Query: 120 SPDPGLRIFTTAQKLQMMTNNYVWLATD-WLSATL--ESFSKMNQT-SLRILQG-VVGLR 174
S + F T Q +T W+A++ W++A++ E++S ++ T I QG V GL+
Sbjct: 258 SGEGEFYPFLTEFVAQNITG-IQWIASEAWVTASMLAETYSFLDGTIGFAIRQGHVPGLQ 316
Query: 175 QHTPDSIPKKAFLSRWSGMQQKGL--------------VSAGLNTYGLYAYDT----VWA 216
+ P++ F W G Q L VS L Y Y + +
Sbjct: 317 DYIRTVTPERLF---WPGNYQNTLTVRPSFNVNLHRINVSQFLKEYSAYMNTSSPRVTYN 373
Query: 217 VARSIDKFINE-HNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQ 275
V +++ F + HN+ + P + L VF + L+ L+ +SGQ
Sbjct: 374 VYKAVYAFAHSLHNLIECRNGHGPFENFSCANLNN--VFP---WQLKHYLEDVSFSISGQ 428
Query: 276 -VQFNQDRNIVSRGYDVINIDK-----MEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQL 329
V F+ + V YD+IN + M+ +VG +DG+ S GK + +
Sbjct: 429 NVNFDNKGDSVPY-YDLINWQRSASGDMQFVKVGL-YDGAQHS--------GKELVIEE- 477
Query: 330 DWKLQNITWPGGKTETP 346
Q ITW +T+ P
Sbjct: 478 ----QAITWSNQQTKVP 490
>UNIPROTKB|F1N6E6 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 OMA:LLPWICQ EMBL:DAAA02062138
EMBL:DAAA02062139 EMBL:DAAA02062140 EMBL:DAAA02062141
EMBL:DAAA02062142 IPI:IPI00694102 Ensembl:ENSBTAT00000026142
Uniprot:F1N6E6
Length = 756
Score = 170 (64.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 380 KVQGYCIDILLEALKLV--PYDVPYKFE--LFGDGLSNPSYDGLVKMVANDVFDAAVGDI 435
+ +G+ ID+L K + Y++ Y+ +G L N S++G++ + + D A+ I
Sbjct: 209 RYKGFSIDVLDALAKALGFKYEI-YQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAI 267
Query: 436 AIVTNRTKIVDFSQPYI--STGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
I R +VDFS+ Y+ S G++I P K S + PF +W AA+ ++ V
Sbjct: 268 TITPERESVVDFSKRYMDYSVGILIKKP--EEKISIFSLFAPFDFAVWACIAAAIPVVGV 325
Query: 494 VIWILEH--RVNDDFRGPPRRQI-ATM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXX 546
+I++L V PR AT+ + + E++ +S+ R
Sbjct: 326 LIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSANSMAMRIVMGSWW 385
Query: 547 XXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSY 597
+ SSYTA+L++ LTV ++ ++ + L + G S Y Y
Sbjct: 386 LFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEY 437
Score = 119 (46.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 53/210 (25%), Positives = 86/210 (40%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYL---------SDS 601
+ SSYTA+L++ LTV ++ ++ + L + G S Y Y DS
Sbjct: 391 VCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEYFRAKGTNPLEQDS 450
Query: 602 LRIQKSRLISL-GSPEDYERALRQGPRNG--GVAAIVDELPYVQLFLSNQTDFGI--IGQ 656
+ R IS G ++ + +G R G A + ++ V+ D + I
Sbjct: 451 TFAELWRTISKNGGADNCVSSPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIAN 510
Query: 657 PFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG-CP--EERRQHSEP 713
+ G+G A Q SP S IL+L + G L L +KW+ G C ++
Sbjct: 511 SVSSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHTGRCDLTSHASAQADG 570
Query: 714 HQLRLISFWGLYLLCGTITFTAFLVFLLRM 743
L+L SF G++ + A LV L +
Sbjct: 571 KSLKLHSFAGVFCILAIGLLLACLVAALEL 600
Score = 68 (29.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 195 QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVF 254
Q+G + L LY YD+V +A + + + + H + R + K +
Sbjct: 56 QEGYLQM-LQISNLYLYDSVLMLANAFHRKLEDRKW-----HSMASLNCIR---KSTKPW 106
Query: 255 DGGTFLLRKLLQTNFTGLSGQVQFNQD 281
+GG +L + + + TGL+G ++F +D
Sbjct: 107 NGGRSMLDTIKKGHITGLTGVMEFRED 133
>MGI|MGI:95812 [details] [associations]
symbol:Grid1 "glutamate receptor, ionotropic, delta 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95812 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:CH466573 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 CTD:2894 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 KO:K05206 OMA:LLPWICQ
EMBL:D10171 EMBL:AK138279 EMBL:CT009532 EMBL:AC114572 EMBL:AC154388
EMBL:AC154730 EMBL:AC163280 EMBL:AC169510 EMBL:CT030647
IPI:IPI00123542 PIR:JH0266 RefSeq:NP_032192.2 UniGene:Mm.121569
UniGene:Mm.413604 ProteinModelPortal:Q61627 SMR:Q61627
MINT:MINT-1791814 STRING:Q61627 PhosphoSite:Q61627 PaxDb:Q61627
PRIDE:Q61627 DNASU:14803 Ensembl:ENSMUST00000043349 GeneID:14803
KEGG:mmu:14803 InParanoid:Q3UUL5 OrthoDB:EOG4ZCT3V ChiTaRS:GRID1
NextBio:286969 Bgee:Q61627 CleanEx:MM_GRID1 Genevestigator:Q61627
Uniprot:Q61627
Length = 1009
Score = 173 (66.0 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 59/232 (25%), Positives = 105/232 (45%)
Query: 380 KVQGYCIDILLEALKLV--PYDVPYKFE--LFGDGLSNPSYDGLVKMVANDVFDAAVGDI 435
+ +G+ ID+L K + Y++ Y+ +G L N S++G++ + + D A+ I
Sbjct: 462 RYKGFSIDVLDALAKALGFKYEI-YQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAI 520
Query: 436 AIVTNRTKIVDFSQPYI--STGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
I R +VDFS+ Y+ S G++I P K S + PF +W AA+ ++ V
Sbjct: 521 TITPERESVVDFSKRYMDYSVGILIKKP--EEKISIFSLFAPFDFAVWACIAAAIPVVGV 578
Query: 494 VIWILEH--RVNDDFRGPPRRQI-ATM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXX 546
+I++L V PR AT+ + + E++V+S+ R
Sbjct: 579 LIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQGGESSVNSVAMRIVMGSWW 638
Query: 547 XXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSY 597
+ SSYTA+L++ LTV ++ ++ + L + G S Y Y
Sbjct: 639 LFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQLEMSYGTVRDSAVYEY 690
Score = 127 (49.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 59/232 (25%), Positives = 94/232 (40%)
Query: 531 EATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGY 588
E++V+S+ R + SSYTA+L++ LTV ++ ++ + L + G
Sbjct: 622 ESSVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQLEMSYGT 681
Query: 589 QVGSFAYSYL---------SDSLRIQKSRLISL-GSPEDYERALRQGPRNG--GVAAIVD 636
S Y Y DS + R IS G ++ +G R G A +
Sbjct: 682 VRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSNPSEGIRKAKKGNYAFLW 741
Query: 637 ELPYVQLFLSNQTDFGI--IGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLH 694
++ V+ D + IG + G+G A Q SP S IL+L + G L L
Sbjct: 742 DVAVVEYAALTDDDCSVTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLK 801
Query: 695 EKWFCKEG-CP--EERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFLLRM 743
+KW+ G C +E L+L SF G++ + A LV L +
Sbjct: 802 QKWWPHTGRCDLTSHSSTQTEGKSLKLHSFAGVFCILAIGLLLACLVAALEL 853
Score = 68 (29.0 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 195 QKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVF 254
Q+G + L LY YD+V +A + + + + H + R + K +
Sbjct: 309 QEGYLQM-LQISNLYLYDSVLMLANAFHRKLEDRKW-----HSMASLNCIR---KSTKPW 359
Query: 255 DGGTFLLRKLLQTNFTGLSGQVQFNQD 281
+GG +L + + + TGL+G ++F +D
Sbjct: 360 NGGRSMLDTIKKGHITGLTGVMEFRED 386
>UNIPROTKB|F1M3N1 [details] [associations]
symbol:Grin2a "Glutamate receptor ionotropic, NMDA 2A"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2737
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565 IPI:IPI00948725
ProteinModelPortal:F1M3N1 Ensembl:ENSRNOT00000067670
ArrayExpress:F1M3N1 Uniprot:F1M3N1
Length = 1327
Score = 155 (59.6 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 291 VINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWV 350
V+N D+ E +VG W + S+ + K+ S + D +I E P +V
Sbjct: 228 VLNKDR-EWEKVGKW-ENQTLSLRHAVWPRYKSFSDCEPDDNHLSIVT---LEEAP--FV 280
Query: 351 IADNARPL-----RIGVPRRASFVGFVTEEHDSHKVQ----GYCIDILLEALKLVPYDVP 401
I ++ PL R VP R FV ++ V+ G+CIDIL + + V +
Sbjct: 281 IVEDIDPLTETCVRNTVPCR-KFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFT-- 337
Query: 402 YKFELFGDGLS----NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLV 457
Y L +G N ++G++ V AVG + I R+++VDFS P++ TG+
Sbjct: 338 YDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGIS 397
Query: 458 IVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI-AVVIWILEH 500
++ +N S FL+PF+ +W + +++ A+ +++ E+
Sbjct: 398 VMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEY 441
Score = 71 (30.1 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPH 714
G F +G+G A Q+ SP + A+L+ +G +++L W C E+ +
Sbjct: 616 GYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGI-CHNEKNEVMSS- 673
Query: 715 QLRLISFWGLYLLCGTITFTAFLVFL 740
QL + + G++ + + + F+
Sbjct: 674 QLDIDNMAGVFYMLAAAMALSLITFI 699
Score = 63 (27.2 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 31/142 (21%), Positives = 56/142 (39%)
Query: 20 DPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYG-RNGISALSNML 78
DPT + QF I+ QQ M ++ Y W V ++ G R+ IS + +
Sbjct: 2 DPTSTFFQFGASIQ------QQATVMLKIMQDYDW-HVFSLVTTIFPGYRDFISFIKTTV 54
Query: 79 EKNMA--KVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQM 136
+ + + + L F V L K + V +++ S D + I + A+ L +
Sbjct: 55 DNSFVGWDMQNVITLDTSFEDAKTQVQL---KKIHSSVILLYCSKDEAVLILSEARSLGL 111
Query: 137 MTNNYVWLATDWLSATLESFSK 158
++ W+ +S E K
Sbjct: 112 TGYDFFWIVPSLVSGNTELIPK 133
>FB|FBgn0038840 [details] [associations]
symbol:CG5621 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 EMBL:AE014297 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR001828
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0015277 RefSeq:NP_001036735.1 UniGene:Dm.31266
ProteinModelPortal:Q0KI38 SMR:Q0KI38 PRIDE:Q0KI38
EnsemblMetazoa:FBtr0110956 GeneID:42476 KEGG:dme:Dmel_CG5621
UCSC:CG5621-RB FlyBase:FBgn0038840 OMA:IEYITER OrthoDB:EOG4W6M9W
PhylomeDB:Q0KI38 GenomeRNAi:42476 NextBio:828990 Bgee:Q0KI38
Uniprot:Q0KI38
Length = 956
Score = 169 (64.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 53/241 (21%), Positives = 102/241 (42%)
Query: 515 ATMFLFSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSV 573
A FS L + E + R + SSYTA+L++ LTV+ L T +
Sbjct: 590 ANCLWFSIGALLQQGSELAPKAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPI 649
Query: 574 KGIESLITNDWPIGY--QVGSFAYSYLSDSLRIQKSRLISL--GSPEDYERALRQGP--- 626
+ L N + Y ++G +++ +S R+ +P+ ++G
Sbjct: 650 NDADDLSKNKGGVNYGAKIGGATFNFFKESNYPTYQRMYEFMRDNPQYMTNTNQEGVDRV 709
Query: 627 RNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSE 686
N A +++ ++ + +G G+G A +++ P +S A+L++ E
Sbjct: 710 ENSNYAFLMESTT-IEYITERRCTLTQVGALLDEKGYGIAMRKNWPYRDTLSQAVLEMQE 768
Query: 687 NGMLQKLHEKWFCKE---GCPEERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFLLRM 743
G+L K+ KW+ ++ G + + S L + + G++L+ G +F V LL M
Sbjct: 769 QGLLTKMKTKWWQEKRGGGACSDADEDSGAVALEISNLGGVFLVMGVGSFFGIFVSLLEM 828
Query: 744 V 744
V
Sbjct: 829 V 829
Score = 149 (57.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 48/241 (19%), Positives = 109/241 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFE---LFGDGLSNPS--YDGLVKMVANDVFDAAVGDIA 436
+G+ I+++ E K + + ++ + +G G+ + ++G+++ + + D + D+
Sbjct: 441 EGFGIELIDELSKKLGFSYTWRLQEDNKYG-GIDPKTGEWNGMLREIIDSRADMGITDLT 499
Query: 437 IVTNRTKIVDFSQPYISTGLVIV--APINNHKASAWVFLKPFTVEMWCVTAASFVMIAVV 494
+ + R VDF+ P++S G+ I+ P+ + F+ PF+ E+W +++ +++
Sbjct: 500 MTSERESGVDFTIPFMSLGIGILFRKPMKE-PPKLFSFMSPFSGEVWLWLGLAYMGVSIS 558
Query: 495 IWILEHRVNDDFRGP------PRR-----QIATMFLFSFSTLFKTNQEATVSSLG-RXXX 542
+++L ++ P P A FS L + E + R
Sbjct: 559 MFVLGRLSPAEWDNPYPCIEEPTELENQFSFANCLWFSIGALLQQGSELAPKAYSTRAVA 618
Query: 543 XXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITNDWPIGY--QVGSFAYSYLSD 600
+ SSYTA+L++ LTV+ L T + + L N + Y ++G +++ +
Sbjct: 619 ASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIGGATFNFFKE 678
Query: 601 S 601
S
Sbjct: 679 S 679
Score = 69 (29.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 50/234 (21%), Positives = 94/234 (40%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAKVSYK-LPLPVQFNQHDITV 102
A+ D++ GW+ IY +Y + L M V+ + L + N ++
Sbjct: 146 ALRDMVVALGWESFTIIYESGEYLPT-VRELLQMYGTAGPTVTVRRYELDLNGNYRNVLR 204
Query: 103 LLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLA--TDWLSATLESFSKMN 160
+ N+ V V ++ P F AQ++ ++T++Y ++ DW + LE +
Sbjct: 205 RIRNADDFS-FVVVGSMATLP--EFFKQAQQVGLVTSDYRYIIGNLDWHTMDLEPYQHAG 261
Query: 161 QTSLRILQGVVGLRQHTPDSIP-KKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVAR 219
+ GLR +PDS ++ + + + VS L YD V +A
Sbjct: 262 TN-------ITGLRLVSPDSEQVQEVAKALYESEEPFQNVSCPLTNSMALVYDGVQLLAE 314
Query: 220 SIDKFINEHNITFSASHELP-DSKATRVQLEQLKVFDGGTFLLR---KLLQTNF 269
+ K +N + S + + D T V + +G T +R + L+T+F
Sbjct: 315 TY-KHVNFRPVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDF 367
Score = 60 (26.2 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 31/143 (21%), Positives = 56/143 (39%)
Query: 170 VVGLRQHTPDSIP-KKAFLSRWSGMQQKGLVSAGLNTYGLYAYDTVWAVARSIDKFINEH 228
+ GLR +PDS ++ + + + VS L YD V +A + K +N
Sbjct: 264 ITGLRLVSPDSEQVQEVAKALYESEEPFQNVSCPLTNSMALVYDGVQLLAETY-KHVNFR 322
Query: 229 NITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRG 288
+ S + D A +D G L+ + GL+G ++F+ +
Sbjct: 323 PVALSCN----DDSA----------WDKGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDFK 368
Query: 289 YDVINIDKMEIHRVGYWFDGSGF 311
+VI + + ++G W GF
Sbjct: 369 LEVIELAVSGMQKIGQWSGEDGF 391
Score = 41 (19.5 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 113 RVYVVHVSPDPGLRIFTTAQKL-QMMTNNYV 142
+++ V VS +PG F T++KL +M+ N V
Sbjct: 66 QLHGVSVSIEPG-NSFETSKKLCKMLRQNLV 95
>MGI|MGI:95820 [details] [associations]
symbol:Grin2a "glutamate receptor, ionotropic, NMDA2A (epsilon
1)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001964 "startle response"
evidence=IGI;IMP] [GO:0001975 "response to amphetamine"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity"
evidence=ISO;IMP] [GO:0005262 "calcium channel activity"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IGI;IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0007612 "learning" evidence=IMP] [GO:0007613
"memory" evidence=ISO;IMP] [GO:0007626 "locomotory behavior"
evidence=TAS] [GO:0008021 "synaptic vesicle" evidence=IDA]
[GO:0008104 "protein localization" evidence=IGI;IMP] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008542 "visual learning"
evidence=IMP] [GO:0009611 "response to wounding" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IPI] [GO:0019233
"sensory perception of pain" evidence=IMP] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0022843 "voltage-gated cation channel activity"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0030431 "sleep" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033058 "directional locomotion"
evidence=IGI] [GO:0034220 "ion transmembrane transport"
evidence=IMP] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IGI;IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0040011 "locomotion" evidence=IMP]
[GO:0042165 "neurotransmitter binding" evidence=ISO] [GO:0042177
"negative regulation of protein catabolic process" evidence=IGI]
[GO:0042391 "regulation of membrane potential" evidence=IMP]
[GO:0042417 "dopamine metabolic process" evidence=IMP] [GO:0042428
"serotonin metabolic process" evidence=IMP] [GO:0042493 "response
to drug" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IGI] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=ISA] [GO:0045202 "synapse"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=ISO] [GO:0048167 "regulation of
synaptic plasticity" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050804 "regulation of
synaptic transmission" evidence=IMP] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0051117 "ATPase binding" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051930
"regulation of sensory perception of pain" evidence=IMP]
[GO:0060078 "regulation of postsynaptic membrane potential"
evidence=IMP] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISO;IGI;IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=IMP] [GO:0071230 "cellular
response to amino acid stimulus" evidence=ISO] [GO:0071294
"cellular response to zinc ion" evidence=ISO] [GO:0097110 "scaffold
protein binding" evidence=ISO] [GO:2000463 "positive regulation of
excitatory postsynaptic membrane potential" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95820
GO:GO:0021987 GO:GO:0021766 GO:GO:0048167 GO:GO:0014069
GO:GO:0009986 GO:GO:0008104 GO:GO:0009611 GO:GO:0071363
GO:GO:0022008 GO:GO:0051592 GO:GO:0042493 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0042220 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0008270
GO:GO:0008542 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0007626 GO:GO:0001975 GO:GO:0048511 GO:GO:0030288
GO:GO:0051707 GO:GO:0043065 GO:GO:0001508 GO:GO:0009743
GO:GO:0071294 GO:GO:0042177 GO:GO:0021510 GO:GO:0048169
GO:GO:0042417 InterPro:IPR001828 GO:GO:0042428 GO:GO:0051597
GO:GO:0071230 GO:GO:0071396 GO:GO:0001964 GO:GO:0016595
GO:GO:0071287 GO:GO:0017146 GO:GO:0071286 GO:GO:0042165
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0071359 GO:GO:0022843
GO:GO:0004972 CTD:2903 HOVERGEN:HBG052635 KO:K05209 OMA:CRSCLSN
OrthoDB:EOG4X0MRG GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
EMBL:D10217 IPI:IPI00118380 PIR:S29159 RefSeq:NP_032196.2
UniGene:Mm.2953 ProteinModelPortal:P35436 SMR:P35436 DIP:DIP-31567N
IntAct:P35436 MINT:MINT-103939 STRING:P35436 PhosphoSite:P35436
PaxDb:P35436 PRIDE:P35436 DNASU:14811 Ensembl:ENSMUST00000032331
Ensembl:ENSMUST00000115835 GeneID:14811 KEGG:mmu:14811
UCSC:uc007ydc.1 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
InParanoid:P35436 BindingDB:P35436 ChEMBL:CHEMBL2521 NextBio:286999
Bgee:P35436 Genevestigator:P35436 GermOnline:ENSMUSG00000059003
Uniprot:P35436
Length = 1464
Score = 155 (59.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 291 VINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWV 350
V+N D+ E +VG W + S+ + K+ S + D +I E P +V
Sbjct: 365 VLNKDR-EWEKVGKW-ENQTLSLRHAVWPRYKSFSDCEPDDNHLSIVT---LEEAP--FV 417
Query: 351 IADNARPL-----RIGVPRRASFVGFVTEEHDSHKVQ----GYCIDILLEALKLVPYDVP 401
I ++ PL R VP R FV ++ V+ G+CIDIL + + V +
Sbjct: 418 IVEDIDPLTETCVRNTVPCR-KFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFT-- 474
Query: 402 YKFELFGDGLS----NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLV 457
Y L +G N ++G++ V AVG + I R+++VDFS P++ TG+
Sbjct: 475 YDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGIS 534
Query: 458 IVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI-AVVIWILEH 500
++ +N S FL+PF+ +W + +++ A+ +++ E+
Sbjct: 535 VMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEY 578
Score = 71 (30.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPH 714
G F +G+G A Q+ SP + A+L+ +G +++L W C E+ +
Sbjct: 753 GYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGI-CHNEKNEVMSS- 810
Query: 715 QLRLISFWGLYLLCGTITFTAFLVFL 740
QL + + G++ + + + F+
Sbjct: 811 QLDIDNMAGVFYMLAAAMALSLITFI 836
Score = 64 (27.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 32/145 (22%), Positives = 57/145 (39%)
Query: 17 AATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYG-RNGISALS 75
A DPT + QF I+ QQ M ++ Y W V ++ G R+ IS +
Sbjct: 136 ADKDPTSTFFQFGASIQ------QQATVMLKIMQDYDW-HVFSLVTTIFPGYRDFISFIK 188
Query: 76 NMLEKNMA--KVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQK 133
++ + + + L F V L K + V +++ S D + I + A+
Sbjct: 189 TTVDNSFVGWDMQNVITLDTSFEDAKTQVQL---KKIHSSVILLYCSKDEAVLILSEARS 245
Query: 134 LQMMTNNYVWLATDWLSATLESFSK 158
L + ++ W+ +S E K
Sbjct: 246 LGLTGYDFFWIVPSLVSGNTELIPK 270
>RGD|2737 [details] [associations]
symbol:Grin2a "glutamate receptor, ionotropic, N-methyl D-aspartate
2A" species:10116 "Rattus norvegicus" [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0001964 "startle response"
evidence=ISO] [GO:0001975 "response to amphetamine" evidence=ISO]
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP;IDA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IMP]
[GO:0005261 "cation channel activity" evidence=ISO;IDA] [GO:0005262
"calcium channel activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007611 "learning or memory" evidence=ISO] [GO:0007612 "learning"
evidence=ISO] [GO:0007613 "memory" evidence=ISO;IDA] [GO:0008021
"synaptic vesicle" evidence=ISO] [GO:0008104 "protein localization"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISS;IDA]
[GO:0008542 "visual learning" evidence=ISO] [GO:0009416 "response to
light stimulus" evidence=IEP] [GO:0009611 "response to wounding"
evidence=ISO] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010042
"response to manganese ion" evidence=IEP] [GO:0010942 "positive
regulation of cell death" evidence=IDA] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016595
"glutamate binding" evidence=IDA;IMP] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IDA] [GO:0019233 "sensory perception of pain"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0021766
"hippocampus development" evidence=IEP] [GO:0021987 "cerebral cortex
development" evidence=IEP] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0022843 "voltage-gated cation channel activity" evidence=IMP]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0030431 "sleep"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0033058 "directional locomotion" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IDA] [GO:0035254
"glutamate receptor binding" evidence=IPI] [GO:0040011 "locomotion"
evidence=ISO] [GO:0042165 "neurotransmitter binding" evidence=IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=ISO] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042391 "regulation of membrane potential" evidence=ISO]
[GO:0042417 "dopamine metabolic process" evidence=ISO] [GO:0042428
"serotonin metabolic process" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP;ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043065 "positive regulation of apoptotic process" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;TAS]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045471
"response to ethanol" evidence=IEP;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IDA] [GO:0050804 "regulation of synaptic
transmission" evidence=ISO] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0051117 "ATPase binding" evidence=IPI]
[GO:0051262 "protein tetramerization" evidence=IDA] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0051930 "regulation of sensory perception of pain"
evidence=ISO] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=ISO;IMP] [GO:0060359
"response to ammonium ion" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0070588 "calcium ion transmembrane
transport" evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0071286 "cellular response to magnesium
ion" evidence=IEP] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:0071294 "cellular response to zinc ion"
evidence=IMP] [GO:0071359 "cellular response to dsRNA" evidence=IEP]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEP] [GO:0071396 "cellular response to lipid" evidence=IEP]
[GO:0097110 "scaffold protein binding" evidence=IPI] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=IDA] [GO:0050966 "detection of mechanical stimulus involved
in sensory perception of pain" evidence=ISO] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2737 GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009986
GO:GO:0008104 GO:GO:0009611 GO:GO:0071363 GO:GO:0022008 GO:GO:0051592
GO:GO:0042493 GO:GO:0045471 GO:GO:0060992 GO:GO:0046872 GO:GO:0042220
GO:GO:0007613 GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008270 GO:GO:0008542 GO:GO:0042734
GO:GO:0043195 GO:GO:0001975 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043065 GO:GO:0009416 GO:GO:0010942 GO:GO:0001508 GO:GO:0009743
GO:GO:0071294 GO:GO:0042177 GO:GO:0021510 GO:GO:0048169 GO:GO:0042417
InterPro:IPR001828 GO:GO:0042428 GO:GO:0014075 GO:GO:0051597
GO:GO:0071230 GO:GO:0071396 GO:GO:0001964 GO:GO:0016595 GO:GO:2000463
GO:GO:0071287 GO:GO:0017146 GO:GO:0071286 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0071359 GO:GO:0022843 GO:GO:0004972 CTD:2903
HOVERGEN:HBG052635 KO:K05209 OrthoDB:EOG4X0MRG GO:GO:0033058
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 EMBL:M91561
EMBL:D13211 EMBL:AF001423 IPI:IPI00326054 PIR:A43274
RefSeq:NP_036705.3 UniGene:Rn.9710 PDB:2A5S PDB:2A5T PDBsum:2A5S
PDBsum:2A5T ProteinModelPortal:Q00959 SMR:Q00959 DIP:DIP-34031N
IntAct:Q00959 MINT:MINT-93314 STRING:Q00959 TCDB:1.A.10.1.6
PhosphoSite:Q00959 PRIDE:Q00959 GeneID:24409 KEGG:rno:24409
UCSC:RGD:2737 InParanoid:Q00959 BindingDB:Q00959 ChEMBL:CHEMBL310
EvolutionaryTrace:Q00959 NextBio:603227 ArrayExpress:Q00959
Genevestigator:Q00959 GermOnline:ENSRNOG00000033942 Uniprot:Q00959
Length = 1464
Score = 155 (59.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 291 VINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWV 350
V+N D+ E +VG W + S+ + K+ S + D +I E P +V
Sbjct: 365 VLNKDR-EWEKVGKW-ENQTLSLRHAVWPRYKSFSDCEPDDNHLSIVT---LEEAP--FV 417
Query: 351 IADNARPL-----RIGVPRRASFVGFVTEEHDSHKVQ----GYCIDILLEALKLVPYDVP 401
I ++ PL R VP R FV ++ V+ G+CIDIL + + V +
Sbjct: 418 IVEDIDPLTETCVRNTVPCR-KFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFT-- 474
Query: 402 YKFELFGDGLS----NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLV 457
Y L +G N ++G++ V AVG + I R+++VDFS P++ TG+
Sbjct: 475 YDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGIS 534
Query: 458 IVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI-AVVIWILEH 500
++ +N S FL+PF+ +W + +++ A+ +++ E+
Sbjct: 535 VMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEY 578
Score = 71 (30.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPH 714
G F +G+G A Q+ SP + A+L+ +G +++L W C E+ +
Sbjct: 753 GYIFASTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGI-CHNEKNEVMSS- 810
Query: 715 QLRLISFWGLYLLCGTITFTAFLVFL 740
QL + + G++ + + + F+
Sbjct: 811 QLDIDNMAGVFYMLAAAMALSLITFI 836
Score = 64 (27.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 32/145 (22%), Positives = 57/145 (39%)
Query: 17 AATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYG-RNGISALS 75
A DPT + QF I+ QQ M ++ Y W V ++ G R+ IS +
Sbjct: 136 ADKDPTSTFFQFGASIQ------QQATVMLKIMQDYDW-HVFSLVTTIFPGYRDFISFIK 188
Query: 76 NMLEKNMA--KVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQK 133
++ + + + L F V L K + V +++ S D + I + A+
Sbjct: 189 TTVDNSFVGWDMQNVITLDTSFEDAKTQVQL---KKIHSSVILLYCSKDEAVLILSEARS 245
Query: 134 LQMMTNNYVWLATDWLSATLESFSK 158
L + ++ W+ +S E K
Sbjct: 246 LGLTGYDFFWIVPSLVSGNTELIPK 270
>UNIPROTKB|G3V9C5 [details] [associations]
symbol:Grin2a "RCG49797, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0001964 "startle response" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0009611 "response to wounding"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030431 "sleep" evidence=IEA]
[GO:0033058 "directional locomotion" evidence=IEA] [GO:0042177
"negative regulation of protein catabolic process" evidence=IEA]
[GO:0042417 "dopamine metabolic process" evidence=IEA] [GO:0042428
"serotonin metabolic process" evidence=IEA] [GO:0042493 "response
to drug" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2737 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 CTD:2903 KO:K05209
OMA:CRSCLSN InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 RefSeq:NP_036705.3 UniGene:Rn.9710
GeneID:24409 KEGG:rno:24409 NextBio:603227 EMBL:CH474017
Ensembl:ENSRNOT00000044626 Uniprot:G3V9C5
Length = 1464
Score = 155 (59.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 291 VINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWV 350
V+N D+ E +VG W + S+ + K+ S + D +I E P +V
Sbjct: 365 VLNKDR-EWEKVGKW-ENQTLSLRHAVWPRYKSFSDCEPDDNHLSIVT---LEEAP--FV 417
Query: 351 IADNARPL-----RIGVPRRASFVGFVTEEHDSHKVQ----GYCIDILLEALKLVPYDVP 401
I ++ PL R VP R FV ++ V+ G+CIDIL + + V +
Sbjct: 418 IVEDIDPLTETCVRNTVPCR-KFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFT-- 474
Query: 402 YKFELFGDGLS----NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLV 457
Y L +G N ++G++ V AVG + I R+++VDFS P++ TG+
Sbjct: 475 YDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGIS 534
Query: 458 IVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI-AVVIWILEH 500
++ +N S FL+PF+ +W + +++ A+ +++ E+
Sbjct: 535 VMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEY 578
Score = 71 (30.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPH 714
G F +G+G A Q+ SP + A+L+ +G +++L W C E+ +
Sbjct: 753 GYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGI-CHNEKNEVMSS- 810
Query: 715 QLRLISFWGLYLLCGTITFTAFLVFL 740
QL + + G++ + + + F+
Sbjct: 811 QLDIDNMAGVFYMLAAAMALSLITFI 836
Score = 64 (27.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 32/145 (22%), Positives = 57/145 (39%)
Query: 17 AATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYG-RNGISALS 75
A DPT + QF I+ QQ M ++ Y W V ++ G R+ IS +
Sbjct: 136 ADKDPTSTFFQFGASIQ------QQATVMLKIMQDYDW-HVFSLVTTIFPGYRDFISFIK 188
Query: 76 NMLEKNMA--KVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQK 133
++ + + + L F V L K + V +++ S D + I + A+
Sbjct: 189 TTVDNSFVGWDMQNVITLDTSFEDAKTQVQL---KKIHSSVILLYCSKDEAVLILSEARS 245
Query: 134 LQMMTNNYVWLATDWLSATLESFSK 158
L + ++ W+ +S E K
Sbjct: 246 LGLTGYDFFWIVPSLVSGNTELIPK 270
>UNIPROTKB|I3L657 [details] [associations]
symbol:LOC100739538 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00918
GO:GO:0016020 GO:GO:0035235 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 EMBL:CT990546
Ensembl:ENSSSCT00000023074 OMA:TSIRETV Uniprot:I3L657
Length = 237
Score = 168 (64.2 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 380 KVQGYCIDILLEALKLV--PYDVPYKFE--LFGDGLSNPSYDGLVKMVANDVFDAAVGDI 435
+ +G+ ID+L K + Y++ Y+ +G L N S++G++ + + D A+ I
Sbjct: 33 RYKGFSIDVLDALAKALGFKYEI-YQAPDGRYGHQLHNTSWNGMIGELISKRADLAISAI 91
Query: 436 AIVTNRTKIVDFSQPYI--STGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAV 493
I R +VDFS+ Y+ S G++I P K S + PF +W AA+ ++ V
Sbjct: 92 TITPERESVVDFSKRYMDYSVGILIRKP--EEKISIFSLFAPFDFAVWACIAAAIPVVGV 149
Query: 494 VIWILEH--RVNDDFRGPPRRQI-ATM---FLFSFSTLFKTNQEATVSSLG-RXXXXXXX 546
+I++L V PR AT+ + + E++V+S+ R
Sbjct: 150 LIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWW 209
Query: 547 XXXXXITSSYTASLSSILTVQQLSTSVK 574
+ SSYTA+L++ LTV ++ ++
Sbjct: 210 LFTLIVCSSYTANLAAFLTVSRMDNPIR 237
>ZFIN|ZDB-GENE-050522-281 [details] [associations]
symbol:olfcw1 "olfactory receptor C family, w1"
species:7955 "Danio rerio" [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] InterPro:IPR000337 InterPro:IPR004073
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR01535
PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
ZFIN:ZDB-GENE-050522-281 GO:GO:0016021 GO:GO:0005886 GO:GO:0004930
InterPro:IPR001828 GeneTree:ENSGT00690000101821 EMBL:BX649622
IPI:IPI00500891 ProteinModelPortal:F1QLP7
Ensembl:ENSDART00000139869 Uniprot:F1QLP7
Length = 866
Score = 179 (68.1 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 54/173 (31%), Positives = 85/173 (49%)
Query: 2 ISEVANGLKVPLVSFAATDPTLSAL-QFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAI 60
IS + N +PLVS+ A+ LS QFPYF R+ SD Q A+A L+ +GW V +
Sbjct: 159 ISRLLNLFHIPLVSYFASCACLSNKHQFPYFFRTIPSDVNQANALARLVKHFGWTWVGTV 218
Query: 61 YVDDDYGRNGISALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVS 120
DD YGR GI + + + VSY++ +P Q + ++ + V V
Sbjct: 219 GADDAYGRTGIDLFTAAVTQLGVCVSYRIIIPKLPTQQQLQDIVRTIRDSSAHVLVAFAI 278
Query: 121 PDPGLRIFTTAQKLQMMTNNYVWLATD-WLSATLESFSKMNQTSLRILQGVVG 172
+ ++ LQ +T W+A++ W+++TL S +K N SL G +G
Sbjct: 279 EED-IKPVVDEIVLQNVTGKQ-WVASEAWVTSTLIS-TKENFPSL---SGTIG 325
Score = 59 (25.8 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 205 TYGLYAYDTVWAVARSIDKFI---NEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLL 261
TY +Y V+ VA ++ + EH + + PD L+ +V + +L
Sbjct: 407 TYNMYK--AVYTVAHALHNLLLCQREHRSALT--QQCPDIH----NLQPWQVIE----VL 454
Query: 262 RKLLQTNFTGLSGQ-VQFNQDRNIVSRGYDVINIDKM-EIHRVGYWFDGSGFSVLPPETL 319
RK+ N+T + G + F+++ + V YD++N K + V Y G S LP
Sbjct: 455 RKV---NYTNMFGDLIYFDENGDPVG-SYDIVNWQKGGDDVPVQYITVGRFDSSLP---- 506
Query: 320 KGKNVSHSQLDWKLQNITWPGGKTETP 346
KG+ + +Q I W GG + P
Sbjct: 507 KGQQLVLNQ-----NKIVWHGGTNKVP 528
Score = 39 (18.8 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 33/128 (25%), Positives = 51/128 (39%)
Query: 615 PEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGIIGQPFTRS-GWGFAFQRDSPL 673
PED+ RN V ++ L Y++ F I+G S G F RD+PL
Sbjct: 576 PEDF---WSNKHRNYCVPKEIEFLSYLEAFGMVLAAIAILGAVAAISVGVVFFRHRDTPL 632
Query: 674 AVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLLCGTITF 733
++ + L +L L + C + + P LR ISF + LC +
Sbjct: 633 VRANNSELSFL----LLISLTLCFICALTFLGQPSHWACP--LRRISFGLTFALCLSCLL 686
Query: 734 TAFLVFLL 741
+ LV L+
Sbjct: 687 SKTLVVLI 694
>UNIPROTKB|F1PEI5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 OMA:CSFYTVG
EMBL:AAEX03016767 EMBL:AAEX03016766 Ensembl:ENSCAFT00000015920
GeneTree:ENSGT00610000087353 Uniprot:F1PEI5
Length = 922
Score = 158 (60.7 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 53/236 (22%), Positives = 108/236 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELF---GDGLSNPSYDGLVK-MVANDVF---DAAV 432
K QG+ ID+L +AL Y + + +E++ +P DG +V VF D +
Sbjct: 381 KYQGFSIDVL-DALS--NY-LGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGI 436
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I +R +VDF+ Y+ + ++ + L PF + +W A + +++
Sbjct: 437 SALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVG 496
Query: 493 VVIWILEHRVNDDFRGPPRRQIATM--------FLFSFSTLFKTNQEATVSSLG-RXXXX 543
+++++L ++ PPR Q+ +M F + + + E ++L R
Sbjct: 497 LLVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMG 550
Query: 544 XXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYL 598
+ SSYTA+L++ LT+ ++ +S++ ++ L D P G + S Y ++
Sbjct: 551 AWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYEHV 606
Score = 151 (58.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 62/211 (29%), Positives = 97/211 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYLS---------DS 601
+ SSYTA+L++ LT+ ++ +S++ ++ L D P G + S Y ++ DS
Sbjct: 559 VISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYEHVRMKGMNPFERDS 618
Query: 602 LRIQKSRLI--SLGSPEDY--ERALRQGPRNGGVAAIVDE--LPYVQLFLSNQTD--FGI 653
+ Q R+I S GS + +A Q + G A + D L YV + N D F
Sbjct: 619 MYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI---NDPDCSFYT 675
Query: 654 IGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSE 712
IG G+G A Q SP S IL+L +NG + L KW+ K G C ++
Sbjct: 676 IGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCALYSSVDTK 735
Query: 713 PH--QLRLISFWGLY-LLCGTITFTAFLVFL 740
L + SF G++ +L I + F+ L
Sbjct: 736 QKGGALDIKSFAGVFCILAAGIVLSCFIAML 766
Score = 76 (31.8 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 57/281 (20%), Positives = 114/281 (40%)
Query: 52 YGWKEVIAIYVDDDYGRNGISA-LSNMLEKNM----AKVSYKLP--LPVQFNQHDITVLL 104
Y W++ I Y D +Y GI L + ++ M KV + + F+ I L
Sbjct: 78 YAWQKFIIFY-DSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDTLRIEEL- 135
Query: 105 NNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSL 164
N + R +V ++P + F T +++ N V W+ E + ++ L
Sbjct: 136 NRYRDTLRRAILV-MNPATA-KSFIT----EVVETNLVAFDCHWIIIN-EEINDVDVQEL 188
Query: 165 --RILQGVVGLRQH--TPDSIPKKAFLS--RWSGM--QQKGLVSAGLNTYGLYAYDTVWA 216
R + + +RQ P +I ++ F R S K + + LY YDTV
Sbjct: 189 VRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLL 248
Query: 217 VARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
+A + K + + H + R + K + GG +L + + +GL+G++
Sbjct: 249 LANAFHKKLEDRKW-----HSMASLSCIR---KNSKPWQGGRSMLETIKKGGVSGLTGEL 300
Query: 277 QFNQDRNIVSRGYDVINIDKME-----IHRVGYWFDGSGFS 312
+F ++ + ++++ + E + ++G W +G +
Sbjct: 301 EFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLN 341
>ZFIN|ZDB-GENE-070822-3 [details] [associations]
symbol:grin2ca "glutamate receptor, ionotropic,
N-methyl D-aspartate 2Ca" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-070822-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX546473 EMBL:CU464067
IPI:IPI00932733 RefSeq:XP_002661175.2 Ensembl:ENSDART00000110554
Ensembl:ENSDART00000145215 GeneID:100329743 KEGG:dre:100329743
Uniprot:E7FH62
Length = 1400
Score = 185 (70.2 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 85/414 (20%), Positives = 170/414 (41%)
Query: 354 NARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSN 413
N P R + + VG TE + +G+CIDIL + + + + Y L +G
Sbjct: 438 NTVPCRRQSNKTETIVGH-TEPYTKLCCKGFCIDILKKLSRNIKFS--YDLYLVTNGKHG 494
Query: 414 PSYDGLVKMVANDVF----DAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASA 469
G+ + +VF D A+G + I R++I+DFS P++ TG+ ++ +N S
Sbjct: 495 KLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSP 554
Query: 470 WVFLKPFTVEMWCVT-AASFVMIAVVIWILEH-------R--VNDDFRGPPRRQIATMFL 519
FL+P++ +W + ++AV +++ E+ R V+ G P I
Sbjct: 555 SAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYCSPVGYNRSLVSAKDPGGPTFTIGKSVW 614
Query: 520 FSFSTLFKTNQ--EATVSSLGRXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIE 577
+ +F + E + + +SYTA+L++ + +Q +V G+
Sbjct: 615 LLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLS 674
Query: 578 SLI----TNDWPIGYQVGSFAYSYLSDSLRIQ----KSRLISLGSPEDYERALRQGPRNG 629
+ +P ++ G+ ++R S ++ + E AL + G
Sbjct: 675 DKKFQKPQDQYP-PFRFGTVPNGSTERNIRSNYPEMHSHMVKYNQ-KGVEDALNS-LKTG 731
Query: 630 GVAAIVDELPYVQLFLSNQTDFGII----GQPFTRSGWGFAFQRDSPLAVGMSTAILKLS 685
+ A + + + ++ G+ F +G+G A Q++S + A+L+
Sbjct: 732 KLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWKRPIDLALLQFL 791
Query: 686 ENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVF 739
+G QKL W C E+++ +L + + G++ + + LVF
Sbjct: 792 ADGDTQKLQTVWLTGI-CRNEKKEVMSS-KLDIDNMAGVFYMLLVAMGLSLLVF 843
Score = 159 (61.0 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 62/264 (23%), Positives = 117/264 (44%)
Query: 248 LEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINIDK-MEIHRVGYWF 306
L ++ GT L R +L ++ FN D +V+ +I +D+ + +VG +
Sbjct: 329 LSPIRPASNGT-LYRHMLNVSWENTD--FSFNSDGYLVNPSMIIITLDRGRQWDKVGNYE 385
Query: 307 DG---SGFSVLPPETLKGKNVSHSQ-LDWK-LQNITWPGGKTETPRGWVIADNARPLRIG 361
G + V P + VS ++ L L+ + + P N P R
Sbjct: 386 SGILQMRYPVWPRYGTFLEPVSDNRHLTVATLEERPFVIVEAVDPVTGTCLSNTVPCRRQ 445
Query: 362 VPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVK 421
+ + VG TE + +G+CIDIL + + + + Y L +G G+
Sbjct: 446 SNKTETIVGH-TEPYTKLCCKGFCIDILKKLSRNIKFS--YDLYLVTNGKHGKLVRGIWN 502
Query: 422 MVANDVF----DAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFT 477
+ +VF D A+G + I R++I+DFS P++ TG+ ++ +N S FL+P++
Sbjct: 503 GMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYS 562
Query: 478 VEMWCVT-AASFVMIAVVIWILEH 500
+W + ++AV +++ E+
Sbjct: 563 PAVWVMMFVMCLTVVAVTVFVFEY 586
Score = 52 (23.4 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 72 SALSNMLEKNMAKVSYKLPLPVQFNQHDITVLLNNSKP 109
SA ++ +++ ++ L LP++ N ITVL+NN+ P
Sbjct: 49 SAYQTEIKGRLSRENF-LDLPLEVNP--ITVLVNNTNP 83
Score = 51 (23.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 27/120 (22%), Positives = 53/120 (44%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKE---VIAIY--VDD--DYGRNGISALSNMLEKNMA 83
F++ S QQ+ M +++ Y W V ++Y D DY R+ I S L +
Sbjct: 148 FLQLGSSIEQQINGMFKVMEEYNWDSFVVVTSLYPGYDTYVDYIRSFIDT-SYFLWELQD 206
Query: 84 KVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVW 143
+++ + N LL + +V +V+ S D +F+ A+++ ++ Y+W
Sbjct: 207 TLTFDMSAD-GMNDLRARRLLQQ---IDAQVLLVYCSHDEAQYLFSMAREVGLVGPGYIW 262
Score = 38 (18.4 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 12/56 (21%), Positives = 26/56 (46%)
Query: 115 YVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSLRILQGV 170
+VV S PG + + + T+ ++W D L+ + + + + R+LQ +
Sbjct: 174 FVVVTSLYPGYDTYVDYIRSFIDTSYFLWELQDTLTFDMSADGMNDLRARRLLQQI 229
>FB|FBgn0028422 [details] [associations]
symbol:GluRIID "Glutamate receptor IID" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS;IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA;IC;ISS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0043179
"rhythmic excitation" evidence=IMP] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:1900073 "regulation of neuromuscular
synaptic transmission" evidence=IC] [GO:0045211 "postsynaptic
membrane" evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 EMBL:AE014297
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0007274 InterPro:IPR001828 GO:GO:0043179
GeneTree:ENSGT00590000082809 KO:K05313 GO:GO:0005234 OMA:IRFSENE
GO:GO:0015277 HSSP:P19491 EMBL:AY768536 EMBL:AY768537 EMBL:AJ251888
EMBL:AJ251889 RefSeq:NP_651982.1 UniGene:Dm.3353 SMR:Q9TVI0
STRING:Q9TVI0 EnsemblMetazoa:FBtr0083938 GeneID:44483
KEGG:dme:Dmel_CG18039 UCSC:CG18039-RA CTD:44483 FlyBase:FBgn0028422
InParanoid:Q9TVI0 OrthoDB:EOG4Z613H GenomeRNAi:44483 NextBio:837310
Uniprot:Q9TVI0
Length = 902
Score = 162 (62.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 66/318 (20%), Positives = 142/318 (44%)
Query: 289 YDVINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLD-WKLQNITWPGGKTETPR 347
+DVI + + +VG W +G F P + V+ + +D L N KT
Sbjct: 374 FDVIELQTSGLVKVGTWEEGKDFEFQRPP----QAVNFNDIDDGSLVN------KT---- 419
Query: 348 GWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDILLEALKLVPYDVPYKF--E 405
+++ + + AS V + +++ QGY +D++ E + ++ ++
Sbjct: 420 -FIVL-----ISVATKPYASLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTFRDGGN 473
Query: 406 LFGD-GLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINN 464
+G + S G++K + D A+ D+ I + R +++DFS P+++ G+ I+ +
Sbjct: 474 DYGSFNKTTNSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILY-VKP 532
Query: 465 HKA--SAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGP-P----RRQIATM 517
KA + + F+ PF+ E+W +++ +++ +I+ ++ P P ++
Sbjct: 533 QKAPPALFSFMDPFSSEVWLYLGIAYLGVSLCFFIIGRLSPIEWDNPYPCIEEPEELENQ 592
Query: 518 FLFS----FST--LFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLS 570
F + F+T L + E +L R + SSYTA+L++ LT++ +
Sbjct: 593 FTINNSLWFTTGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPT 652
Query: 571 TSVKGIESLITNDWPIGY 588
+ + ++ L N + Y
Sbjct: 653 SPINSVKDLADNKDDVQY 670
Score = 146 (56.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 52/244 (21%), Positives = 108/244 (44%)
Query: 520 FSFSTLFKTNQEATVSSLG-RXXXXXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIES 578
F+ L + E +L R + SSYTA+L++ LT++ ++ + ++
Sbjct: 601 FTTGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKD 660
Query: 579 LITNDWPIGY---QVGSFA--YSYLSDSLRIQKSRLISLGSPEDYERALRQGP---RNGG 630
L N + Y + GS +S + + I+ + ++ PE +QG ++G
Sbjct: 661 LADNKDDVQYGAKRTGSTRNFFSTSEEPIYIKMNEYLN-AHPEMLMENNQQGVDKVKSGT 719
Query: 631 VAAIVDELPYVQLFLSNQTDFGIIGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGML 690
A + E ++ + + +G P G+G A ++ P + A+L+L E G+L
Sbjct: 720 KYAFLMESTSIEFNTVRECNLTKVGDPLDEKGYGIAMVKNWPYRDKFNKALLELQEQGVL 779
Query: 691 QKLHEKWFCKEGCP--EERRQHSEPHQLRLISFWGLYLLCGTITFTAFLVFLLRMVCQYV 748
+L KW+ + G + P +L + + G+Y++ + + ++ +L C +V
Sbjct: 780 ARLKNKWWNEVGAGVCSAKSDDDGPSELGVDNLSGIYVVLVIGSIISIIISILCW-CYFV 838
Query: 749 RYKQ 752
YK+
Sbjct: 839 -YKK 841
Score = 70 (29.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 57/297 (19%), Positives = 116/297 (39%)
Query: 44 AMADLIDFYGWKEVIAIYVDDDYGRNGISALSNMLEKNMAK--VSYKLPLPVQFNQHDIT 101
A+ D+++ + W I Y +Y + L +++ + K V + + N + +
Sbjct: 145 ALYDIVNQFEWSRFIFCYESAEY----LKILDHLMTRYGIKGPVIKVMRYDLNLNGNYKS 200
Query: 102 VLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSAT--LESFSKM 159
VL K R+ VV S + AQ++ +M +Y ++ + T LE + K
Sbjct: 201 VLRRIRKSEDSRIVVVG-STTGVAELLRQAQQVGIMNEDYTYIIGNLNLHTFDLEEY-KY 258
Query: 160 NQTSLRILQGVVGLRQHTPDSIPKKAFLSRW-SGMQQKGLVSAGLNTYGL---YAYDTVW 215
++ + + G+R +PD + + + + + V++G + YD V
Sbjct: 259 SEAN------ITGIRMFSPDQEEVRDLMEKLHQELGESEPVNSGSTFITMEMALTYDAVR 312
Query: 216 AVARSIDKF-INEHNITFSASHELPDSKATRVQLEQLKVFDGGTFL-LRKLLQTNFTGLS 273
+A + + S H+ VQ DG TF + L+ ++
Sbjct: 313 VIAETTKHLPYQPQMLNCSERHD-------NVQP------DGSTFRNYMRSLEIKEKTIT 359
Query: 274 GQVQFNQDRNIVSRGYDVINIDKMEIHRVGYWFDGSGFSVL-PPETLKGKNVSHSQL 329
G++ F + +DVI + + +VG W +G F PP+ + ++ L
Sbjct: 360 GRIYFEGNVR-KGFTFDVIELQTSGLVKVGTWEEGKDFEFQRPPQAVNFNDIDDGSL 415
>ZFIN|ZDB-GENE-070424-129 [details] [associations]
symbol:grin2aa "glutamate receptor, ionotropic,
N-methyl D-aspartate 2A, a" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070424-129
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HOVERGEN:HBG052635 OrthoDB:EOG4X0MRG
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
HOGENOM:HOG000113802 EMBL:CR954963 EMBL:BX908803 IPI:IPI00494319
Ensembl:ENSDART00000073979 Ensembl:ENSDART00000142141
Uniprot:F1QZC7
Length = 1460
Score = 164 (62.8 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 68/279 (24%), Positives = 127/279 (45%)
Query: 237 ELPDSKATRV-QLEQLKVFDGGTFLLRKLLQTNFTGLSGQVQFNQDRNIVSRGYDVINID 295
++P++K + Q+E+ K+ L K + N T + F +D V VI ++
Sbjct: 309 DIPEAKTSCYGQMEKTKLPPSA---LHKYMM-NVTWDGKDLSFTEDGYQVHPKLVVIVLN 364
Query: 296 K-MEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWVIADN 354
K E ++G W + ++ P + + ++ D I T + +VI +N
Sbjct: 365 KDREWEKMGKW-ENQSLTLKYPVWPRFNSFGDAETDDNHLTIV-----TLEEKPFVIVEN 418
Query: 355 ARPL-----RIGVPRRASFVGFVTEEHDSH-K--VQGYCIDILLEALKLVPYDVPYKFEL 406
L R VP R TE ++ K +G+CIDIL + + V + Y L
Sbjct: 419 VERLTGTCMRNSVPCRKHIKDNTTEGGGTYIKKCCKGFCIDILKKIARNVKFT--YDLYL 476
Query: 407 FGDGLS----NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPI 462
+G N ++G+V V N AVG + I R++++DFS P++ TG+ ++
Sbjct: 477 VTNGKHGKKINNVWNGMVGEVVNKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSR 536
Query: 463 NNHKASAWVFLKPFTVEMWCVTAASFVMI-AVVIWILEH 500
+N S FL+PF+ +W + +++ A+ +++ E+
Sbjct: 537 SNGTVSPSAFLEPFSASVWVMMFVMLLLVTAMAVFMFEY 575
Score = 68 (29.0 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 655 GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPH 714
G F +G+G A Q+ S + AIL + +G +++L +W C E+ +
Sbjct: 750 GYIFATTGYGIALQKGSLWKRPVDLAILAIIGDGEMEELEAQWLTGI-CHNEKNEVMSS- 807
Query: 715 QLRLISFWGLYLLCGTITFTAFLVFL 740
QL + + G++ + T + + F+
Sbjct: 808 QLDVDNMAGVFYMLATAMGLSLITFV 833
Score = 52 (23.4 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 22/115 (19%), Positives = 46/115 (40%)
Query: 31 FIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYG-RNGISALSNMLEKNMAKVSYKL 89
F + S Q+ M ++++ Y W V +I G ++ I+ L ++ + +
Sbjct: 141 FFQFGASIQQEALLMLNIMEEYDW-HVFSIVTSKFPGYQDFIAILKTTVDNSFVGWDLQH 199
Query: 90 PLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWL 144
+ + D + K P V +++ S D I A+ L + Y+W+
Sbjct: 200 IITLDAVDGDSRTQIQLKKVQSP-VVLLYCSKDEAAYILEEARSLGLTGFGYIWI 253
>UNIPROTKB|O43424 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISS] [GO:0034613 "cellular protein localization"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISS] [GO:0060134 "prepulse inhibition"
evidence=ISS] [GO:0030165 "PDZ domain binding" evidence=ISS]
[GO:0097110 "scaffold protein binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0006810
GO:GO:0043197 GO:GO:0035235 GO:GO:0045202 GO:GO:0060079
GO:GO:0060134 GO:GO:0035249 DrugBank:DB00142 GO:GO:0030288
GO:GO:0030165 GO:GO:0043523 InterPro:IPR001828 GO:GO:0097110
GO:GO:0008328 GO:GO:0005234 GO:GO:0008066 GO:GO:0004970
eggNOG:NOG276334 HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895
KO:K05207 OrthoDB:EOG4SBDX4 EMBL:AF009014 EMBL:AB209318
EMBL:AC022317 EMBL:AC093596 EMBL:AC093733 EMBL:AC096769
EMBL:AC104077 EMBL:AC105315 EMBL:AC105452 EMBL:AC112695
EMBL:AC115111 EMBL:BC099652 EMBL:BC099653 IPI:IPI00747494
RefSeq:NP_001501.2 UniGene:Hs.480281 ProteinModelPortal:O43424
SMR:O43424 MINT:MINT-257823 STRING:O43424 PhosphoSite:O43424
PaxDb:O43424 PRIDE:O43424 Ensembl:ENST00000282020 GeneID:2895
KEGG:hsa:2895 UCSC:uc011cdt.2 GeneCards:GC04P093225
H-InvDB:HIX0031353 HGNC:HGNC:4576 MIM:602368 neXtProt:NX_O43424
PharmGKB:PA28971 InParanoid:O43424 OMA:CSFYTVG PhylomeDB:O43424
GenomeRNAi:2895 NextBio:11455 ArrayExpress:O43424 Bgee:O43424
CleanEx:HS_GRID2 Genevestigator:O43424 Uniprot:O43424
Length = 1007
Score = 154 (59.3 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 52/236 (22%), Positives = 108/236 (45%)
Query: 380 KVQGYCIDILLEALKLVPYDVPYKFELF---GDGLSNPSYDGLVK-MVANDVF---DAAV 432
K QG+ ID+L +AL Y + + +E++ +P DG +V VF D +
Sbjct: 466 KYQGFSIDVL-DALS--NY-LGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGI 521
Query: 433 GDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIA 492
+ I +R +VDF+ Y+ + ++ + L PF + +W A + +++
Sbjct: 522 SALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVG 581
Query: 493 VVIWILEHRVNDDFRGPPRRQIATM--------FLFSFSTLFKTNQEATVSSLG-RXXXX 543
+++++L ++ PPR Q+ +M F + + + E ++L R
Sbjct: 582 LLVYLL------NWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMG 635
Query: 544 XXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYL 598
+ SSYTA+L++ LT+ ++ +S++ ++ L + P G + S Y ++
Sbjct: 636 AWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHV 691
Score = 147 (56.8 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 61/211 (28%), Positives = 97/211 (45%)
Query: 552 ITSSYTASLSSILTVQQLSTSVKGIESLITN-DWPIGYQVGSFAYSYLS---------DS 601
+ SSYTA+L++ LT+ ++ +S++ ++ L + P G + S Y ++ DS
Sbjct: 644 VISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHVRMKGLNPFERDS 703
Query: 602 LRIQKSRLI--SLGSPEDY--ERALRQGPRNGGVAAIVDE--LPYVQLFLSNQTD--FGI 653
+ Q R+I S GS + +A Q + G A + D L YV + N D F
Sbjct: 704 MYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI---NDPDCSFYT 760
Query: 654 IGQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEG-CPEERRQHSE 712
IG G+G A Q SP S IL+L +NG + L KW+ K G C ++
Sbjct: 761 IGNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDLYSSVDTK 820
Query: 713 PH--QLRLISFWGLY-LLCGTITFTAFLVFL 740
L + SF G++ +L I + F+ L
Sbjct: 821 QKGGALDIKSFAGVFCILAAGIVLSCFIAML 851
Score = 77 (32.2 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 57/281 (20%), Positives = 114/281 (40%)
Query: 52 YGWKEVIAIYVDDDYGRNGISA-LSNMLEKNM----AKVSYKLP--LPVQFNQHDITVLL 104
Y W++ I Y D +Y GI L + ++ M KV + + F+ I L
Sbjct: 163 YAWQKFIIFY-DSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDTMRIEEL- 220
Query: 105 NNSKPLGPRVYVVHVSPDPGLRIFTTAQKLQMMTNNYVWLATDWLSATLESFSKMNQTSL 164
N + R +V ++P + F T +++ N V W+ E + ++ L
Sbjct: 221 NRYRDTLRRAILV-MNPATA-KSFIT----EVVETNLVAFDCHWIIIN-EEINDVDVQEL 273
Query: 165 --RILQGVVGLRQH--TPDSIPKKAFLS--RWSGM--QQKGLVSAGLNTYGLYAYDTVWA 216
R + + +RQ P +I ++ F R S K + + LY YDTV
Sbjct: 274 VRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYIYDTVLL 333
Query: 217 VARSIDKFINEHNITFSASHELPDSKATRVQLEQLKVFDGGTFLLRKLLQTNFTGLSGQV 276
+A + K + + H + R + K + GG +L + + +GL+G++
Sbjct: 334 LANAFHKKLEDRKW-----HSMASLSCIR---KNSKPWQGGRSMLETIKKGGVSGLTGEL 385
Query: 277 QFNQDRNIVSRGYDVINIDKME-----IHRVGYWFDGSGFS 312
+F ++ + ++++ + E + ++G W +G +
Sbjct: 386 EFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLN 426
>RGD|2739 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, N-methyl D-aspartate
2C" species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006812 "cation
transport" evidence=ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0009611 "response to wounding"
evidence=IEA;ISO] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0033058 "directional locomotion" evidence=IEA;ISO]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO;IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IEA;ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA;ISO]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0030288 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905 HOVERGEN:HBG052636
KO:K05211 OrthoDB:EOG42RD6M EMBL:M91563 EMBL:D13212 IPI:IPI00326555
RefSeq:NP_036707.3 UniGene:Rn.9709 ProteinModelPortal:Q00961
SMR:Q00961 IntAct:Q00961 MINT:MINT-87425 STRING:Q00961
PhosphoSite:Q00961 PRIDE:Q00961 Ensembl:ENSRNOT00000004477
GeneID:24411 KEGG:rno:24411 InParanoid:Q00961 BindingDB:Q00961
ChEMBL:CHEMBL401 NextBio:603235 ArrayExpress:Q00961
Genevestigator:Q00961 GermOnline:ENSRNOG00000003280 Uniprot:Q00961
Length = 1237
Score = 155 (59.6 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 47/211 (22%), Positives = 95/211 (45%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVF----DAAVGDIAI 437
+G+CIDIL + K+V + Y L +G G+ + +V+ D A+G + I
Sbjct: 455 KGFCIDILKKLAKVVKFS--YDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTI 512
Query: 438 VTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVT-AASFVMIAVVIW 496
R++I+DFS P++ TG+ ++ +N S FL+P++ +W + ++A+ ++
Sbjct: 513 NEERSEIIDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVF 572
Query: 497 ILEH----RVNDDFR-----GPPRRQIATMFLFSFSTLFKTNQ--EATVSSLGRXXXXXX 545
+ E+ N + G P I ++ +F + E + +
Sbjct: 573 MFEYFSPVSYNQNLTKGKKPGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVW 632
Query: 546 XXXXXXITSSYTASLSSILTVQQLSTSVKGI 576
+SYTA+L++ + +Q +V G+
Sbjct: 633 AFFAVIFLASYTANLAAFMIQEQYIDTVSGL 663
Score = 84 (34.6 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 43/197 (21%), Positives = 82/197 (41%)
Query: 554 SSYTASLSSILTVQQLSTSVKGIESLI----TNDWP---IGYQVGSFAYSYLSDSLRIQK 606
+SYTA+L++ + +Q +V G+ + +P G + + R
Sbjct: 641 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMH 700
Query: 607 SRLISLG--SPEDYERALRQGPRNGGV--AAIVDELPYVQLFLSNQTDFGIIGQPFTRSG 662
+ ++ S ED +L+ G + + AA+++ + T G G+ F +G
Sbjct: 701 THMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVT-IGS-GKVFATTG 758
Query: 663 WGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSEPHQLRLISFW 722
+G A Q+DS + A+L+L +G QKL W G + + +L + +
Sbjct: 759 YGIAMQKDSHWKRAIDLALLQLLGDGETQKLETVWL--SGICQNEKNEVMSSKLDIDNMA 816
Query: 723 GLYLLCGTITFTAFLVF 739
G++ + A LVF
Sbjct: 817 GVFYMLLVAMGLALLVF 833
Score = 40 (19.1 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 92 PVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPG 124
PV ++H +TV +P +V+ SPDPG
Sbjct: 396 PVVDSRH-LTVATLEERP-----FVIVESPDPG 422
>UNIPROTKB|Q12879 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0009611 "response
to wounding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0030431
"sleep" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0042417 "dopamine metabolic process"
evidence=IEA] [GO:0042428 "serotonin metabolic process"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0006810
"transport" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007611 "learning or memory" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0009986 "cell surface"
evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0071363 GO:GO:0022008 GO:GO:0051592 GO:GO:0042493
GO:GO:0045471 GO:GO:0060992 GO:GO:0046872 GO:GO:0042220
GO:GO:0007268 GO:GO:0007613 GO:GO:0019233 GO:GO:0030431
GO:GO:0005262 GO:GO:0051930 GO:GO:0030054 GO:GO:0045211
GO:GO:0008270 GO:GO:0008542 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0001975 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043065
GO:GO:0001508 GO:GO:0009743 GO:GO:0071294 GO:GO:0042177
DrugBank:DB00145 GO:GO:0021510 GO:GO:0048169 GO:GO:0042417
InterPro:IPR001828 GO:GO:0042428 GO:GO:0051597 GO:GO:0071230
GO:GO:0071396 DrugBank:DB00836 GO:GO:0001964 DrugBank:DB01043
DrugBank:DB00949 GO:GO:0016595 GO:GO:0071287 GO:GO:0017146
GO:GO:0071286 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0071359 GO:GO:0022843 GO:GO:0004972 EMBL:U09002 EMBL:U90277
EMBL:AC006531 EMBL:AC007218 EMBL:AC022168 EMBL:AC026423
EMBL:AC133565 EMBL:BC117131 EMBL:BC143273 IPI:IPI00029768
PIR:S47555 RefSeq:NP_000824.1 RefSeq:NP_001127879.1
RefSeq:NP_001127880.1 UniGene:Hs.411472 PDB:3NFL PDBsum:3NFL
ProteinModelPortal:Q12879 SMR:Q12879 MINT:MINT-414776 STRING:Q12879
PhosphoSite:Q12879 DMDM:14285603 PaxDb:Q12879 PRIDE:Q12879
DNASU:2903 Ensembl:ENST00000330684 Ensembl:ENST00000396573
Ensembl:ENST00000396575 Ensembl:ENST00000404927
Ensembl:ENST00000562109 GeneID:2903 KEGG:hsa:2903 UCSC:uc002czo.4
CTD:2903 GeneCards:GC16M009762 HGNC:HGNC:4585 HPA:CAB022725
MIM:138253 MIM:613971 neXtProt:NX_Q12879 Orphanet:289266
PharmGKB:PA28979 HOVERGEN:HBG052635 InParanoid:Q12879 KO:K05209
OMA:CRSCLSN OrthoDB:EOG4X0MRG PhylomeDB:Q12879 BindingDB:Q12879
ChEMBL:CHEMBL1972 EvolutionaryTrace:Q12879 GenomeRNAi:2903
NextBio:11495 ArrayExpress:Q12879 Bgee:Q12879 CleanEx:HS_GRIN2A
Genevestigator:Q12879 GermOnline:ENSG00000183454 GO:GO:0033058
InterPro:IPR018884 Pfam:PF10565 Uniprot:Q12879
Length = 1464
Score = 171 (65.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 76/388 (19%), Positives = 161/388 (41%)
Query: 382 QGYCIDILLEALKLVPYDVPYKFELFGDGLS----NPSYDGLVKMVANDVFDAAVGDIAI 437
+G+CIDIL + + V + Y L +G N ++G++ V AVG + I
Sbjct: 457 KGFCIDILKKLSRTVKFT--YDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTI 514
Query: 438 VTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI-AVVIW 496
R+++VDFS P++ TG+ ++ +N S FL+PF+ +W + +++ A+ ++
Sbjct: 515 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVF 574
Query: 497 ILEH----RVNDDF---RGP--PRRQIATMFLFSFSTLFKT-----NQEATVSSLGRXXX 542
+ E+ N + + P P I + +F N + T S +
Sbjct: 575 VFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKI---MV 631
Query: 543 XXXXXXXXXITSSYTASLSSILTVQQLSTSVKGIESLI---TNDWPIGYQVGSFAYSYLS 599
+SYTA+L++ + ++ V G+ +D+ ++ G+
Sbjct: 632 SVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTE 691
Query: 600 DSLRIQ---KSRLISLGSPEDYERALRQGPRNGGVAAIVDELPYVQLFLSNQTDFGII-- 654
++R + ++ + + E AL + G + A + + + ++
Sbjct: 692 RNIRNNYPYMHQYMTKFNQKGVEDAL-VSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTI 750
Query: 655 --GQPFTRSGWGFAFQRDSPLAVGMSTAILKLSENGMLQKLHEKWFCKEGCPEERRQHSE 712
G F +G+G A Q+ SP + A+L+ +G +++L W C E+ +
Sbjct: 751 GSGYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLTGI-CHNEKNEVMS 809
Query: 713 PHQLRLISFWGLYLLCGTITFTAFLVFL 740
QL + + G++ + + + F+
Sbjct: 810 S-QLDIDNMAGVFYMLAAAMALSLITFI 836
Score = 154 (59.3 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 59/224 (26%), Positives = 105/224 (46%)
Query: 291 VINIDKMEIHRVGYWFDGSGFSVLPPETLKGKNVSHSQLDWKLQNITWPGGKTETPRGWV 350
V+N D+ E +VG W + S+ + K+ S + D +I E P +V
Sbjct: 365 VLNKDR-EWEKVGKW-ENHTLSLRHAVWPRYKSFSDCEPDDNHLSIVT---LEEAP--FV 417
Query: 351 IADNARPL-----RIGVPRRASFVGFVTEEHDSHKVQ----GYCIDILLEALKLVPYDVP 401
I ++ PL R VP R FV ++ V+ G+CIDIL + + V +
Sbjct: 418 IVEDIDPLTETCVRNTVPCR-KFVKINNSTNEGMNVKKCCKGFCIDILKKLSRTVKFT-- 474
Query: 402 YKFELFGDGLS----NPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLV 457
Y L +G N ++G++ V AVG + I R+++VDFS P++ TG+
Sbjct: 475 YDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGIS 534
Query: 458 IVAPINNHKASAWVFLKPFTVEMWCVTAASFVMI-AVVIWILEH 500
++ +N S FL+PF+ +W + +++ A+ +++ E+
Sbjct: 535 VMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFEY 578
Score = 62 (26.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 32/145 (22%), Positives = 56/145 (38%)
Query: 17 AATDPTLSALQFPYFIRSTQSDSQQMAAMADLIDFYGWKEVIAIYVDDDYG-RNGISALS 75
A DPT + QF I+ QQ M ++ Y W V ++ G R IS +
Sbjct: 136 ADKDPTSTFFQFGASIQ------QQATVMLKIMQDYDW-HVFSLVTTIFPGYREFISFVK 188
Query: 76 NMLEKNMA--KVSYKLPLPVQFNQHDITVLLNNSKPLGPRVYVVHVSPDPGLRIFTTAQK 133
++ + + + L F V L K + V +++ S D + I + A+
Sbjct: 189 TTVDNSFVGWDMQNVITLDTSFEDAKTQVQL---KKIHSSVILLYCSKDEAVLILSEARS 245
Query: 134 LQMMTNNYVWLATDWLSATLESFSK 158
L + ++ W+ +S E K
Sbjct: 246 LGLTGYDFFWIVPSLVSGNTELIPK 270
WARNING: HSPs involving 243 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 806 782 0.00094 121 3 11 22 0.36 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 493
No. of states in DFA: 631 (67 KB)
Total size of DFA: 407 KB (2196 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.64u 0.12s 57.76t Elapsed: 00:00:02
Total cpu time: 57.75u 0.12s 57.87t Elapsed: 00:00:03
Start: Mon May 20 23:33:24 2013 End: Mon May 20 23:33:27 2013
WARNINGS ISSUED: 2