Query 003636
Match_columns 806
No_of_seqs 398 out of 3645
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 03:10:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003636.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003636hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 2E-199 4E-204 1737.8 72.7 804 1-804 2-805 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 4E-193 9E-198 1684.6 74.9 782 24-805 1-783 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 5E-171 1E-175 1392.6 30.3 550 7-556 1-550 (550)
4 KOG0853 Glycosyltransferase [C 100.0 9.5E-60 2.1E-64 524.8 24.5 491 195-797 1-495 (495)
5 TIGR02468 sucrsPsyn_pln sucros 100.0 1.1E-57 2.3E-62 546.6 41.5 453 278-770 169-671 (1050)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 8.9E-51 1.9E-55 463.6 42.6 424 279-767 1-438 (439)
7 PRK00654 glgA glycogen synthas 100.0 4.9E-44 1.1E-48 411.1 36.8 427 279-769 1-462 (466)
8 PLN02939 transferase, transfer 100.0 2.4E-42 5.3E-47 408.9 46.2 489 226-770 416-967 (977)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 8.1E-43 1.8E-47 392.2 40.0 399 281-769 1-401 (405)
10 TIGR02095 glgA glycogen/starch 100.0 2E-42 4.3E-47 398.5 38.6 435 279-769 1-472 (473)
11 PRK14098 glycogen synthase; Pr 100.0 1.4E-41 3.1E-46 392.0 38.6 439 276-769 4-485 (489)
12 PLN02316 synthase/transferase 100.0 1.5E-41 3.3E-46 408.9 40.1 406 278-769 587-1033(1036)
13 cd03800 GT1_Sucrose_synthase T 100.0 4.8E-41 1E-45 373.8 40.9 397 280-764 1-397 (398)
14 PRK10307 putative glycosyl tra 100.0 3E-40 6.6E-45 373.1 40.0 397 279-770 1-408 (412)
15 PRK14099 glycogen synthase; Pr 100.0 2.3E-40 5.1E-45 381.6 39.7 437 278-770 3-479 (485)
16 cd03796 GT1_PIG-A_like This fa 100.0 1.6E-40 3.6E-45 373.9 37.1 365 280-769 1-367 (398)
17 cd03791 GT1_Glycogen_synthase_ 100.0 1.6E-40 3.5E-45 382.2 37.4 434 280-768 1-475 (476)
18 TIGR02149 glgA_Coryne glycogen 100.0 6.1E-39 1.3E-43 357.5 38.1 378 279-769 1-386 (388)
19 PLN02871 UDP-sulfoquinovose:DA 100.0 5.3E-39 1.1E-43 369.3 38.6 379 276-774 56-440 (465)
20 PRK15427 colanic acid biosynth 100.0 7.4E-39 1.6E-43 362.0 38.7 281 405-769 116-405 (406)
21 cd04962 GT1_like_5 This family 100.0 2.3E-38 5.1E-43 349.6 39.2 366 279-769 1-370 (371)
22 PRK15484 lipopolysaccharide 1, 100.0 2.6E-37 5.7E-42 346.4 38.5 375 277-770 1-378 (380)
23 cd03818 GT1_ExpC_like This fam 100.0 4.1E-37 8.8E-42 346.0 38.2 367 318-765 15-396 (396)
24 TIGR03088 stp2 sugar transfera 100.0 5.2E-37 1.1E-41 341.2 37.3 365 280-769 3-372 (374)
25 cd03805 GT1_ALG2_like This fam 100.0 6.7E-37 1.5E-41 341.6 36.8 386 279-763 1-392 (392)
26 cd05844 GT1_like_7 Glycosyltra 100.0 7.8E-37 1.7E-41 337.0 33.6 281 405-765 80-366 (367)
27 KOG1111 N-acetylglucosaminyltr 100.0 2.2E-37 4.8E-42 326.3 24.9 365 279-770 1-367 (426)
28 PRK15490 Vi polysaccharide bio 100.0 1.5E-36 3.2E-41 345.1 33.5 398 299-769 171-575 (578)
29 PRK15179 Vi polysaccharide bio 100.0 5.5E-36 1.2E-40 354.3 37.9 300 394-768 390-692 (694)
30 cd04955 GT1_like_6 This family 100.0 1.8E-35 3.8E-40 324.6 39.1 361 280-768 1-363 (363)
31 cd03792 GT1_Trehalose_phosphor 100.0 1.5E-35 3.2E-40 330.3 35.1 287 405-769 83-371 (372)
32 cd03819 GT1_WavL_like This fam 100.0 3.1E-35 6.7E-40 322.0 34.2 346 301-759 9-355 (355)
33 cd03821 GT1_Bme6_like This fam 100.0 9.6E-35 2.1E-39 315.4 36.5 372 280-764 1-374 (375)
34 cd03799 GT1_amsK_like This is 100.0 3.7E-34 8E-39 312.7 36.9 272 405-763 77-355 (355)
35 cd03794 GT1_wbuB_like This fam 100.0 7.8E-34 1.7E-38 309.3 37.4 387 280-764 1-394 (394)
36 cd03813 GT1_like_3 This family 100.0 5E-35 1.1E-39 337.3 29.1 295 405-768 171-475 (475)
37 cd03802 GT1_AviGT4_like This f 100.0 8.1E-34 1.7E-38 308.3 36.5 333 279-768 1-335 (335)
38 cd03801 GT1_YqgM_like This fam 100.0 2E-33 4.3E-38 302.1 38.8 373 280-767 1-373 (374)
39 cd03814 GT1_like_2 This family 100.0 1.1E-33 2.4E-38 307.9 37.2 363 280-768 1-364 (364)
40 cd03795 GT1_like_4 This family 100.0 1.3E-33 2.8E-38 308.7 37.1 354 280-760 1-357 (357)
41 cd04951 GT1_WbdM_like This fam 100.0 1.6E-33 3.5E-38 308.3 36.8 358 280-768 1-359 (360)
42 cd03807 GT1_WbnK_like This fam 100.0 1.1E-33 2.4E-38 305.9 35.1 363 280-768 1-365 (365)
43 cd03817 GT1_UGDG_like This fam 100.0 2.2E-33 4.9E-38 305.1 35.7 370 280-768 1-372 (374)
44 cd03822 GT1_ecORF704_like This 100.0 6.1E-33 1.3E-37 302.7 38.5 358 280-768 1-366 (366)
45 cd03812 GT1_CapH_like This fam 100.0 1.4E-33 3E-38 309.3 32.4 346 280-751 1-347 (358)
46 PLN02846 digalactosyldiacylgly 100.0 2.6E-33 5.6E-38 317.4 35.4 369 277-770 3-392 (462)
47 PRK09922 UDP-D-galactose:(gluc 100.0 1E-33 2.2E-38 314.5 31.2 347 279-768 1-354 (359)
48 cd03816 GT1_ALG1_like This fam 100.0 7.2E-33 1.6E-37 314.1 38.1 391 276-764 1-411 (415)
49 cd03825 GT1_wcfI_like This fam 100.0 3.8E-33 8.3E-38 305.9 34.0 343 279-769 1-364 (365)
50 cd03820 GT1_amsD_like This fam 100.0 3.1E-32 6.8E-37 292.1 35.7 345 280-764 1-347 (348)
51 cd03808 GT1_cap1E_like This fa 100.0 4.1E-32 9E-37 292.4 36.5 356 280-764 1-358 (359)
52 cd03809 GT1_mtfB_like This fam 100.0 1.3E-32 2.8E-37 300.0 31.1 364 280-764 1-364 (365)
53 PRK10125 putative glycosyl tra 100.0 2E-32 4.4E-37 309.3 33.1 278 405-769 92-404 (405)
54 cd03798 GT1_wlbH_like This fam 100.0 1.7E-31 3.7E-36 288.5 38.6 284 405-768 91-375 (377)
55 PLN02949 transferase, transfer 100.0 6.5E-32 1.4E-36 309.2 37.1 395 273-769 28-456 (463)
56 cd03806 GT1_ALG11_like This fa 100.0 4.8E-32 1E-36 307.8 35.3 368 301-761 13-418 (419)
57 cd03823 GT1_ExpE7_like This fa 100.0 6.7E-32 1.4E-36 292.8 34.9 353 280-768 1-358 (359)
58 TIGR03087 stp1 sugar transfera 100.0 1.9E-32 4E-37 308.4 28.5 284 405-768 102-395 (397)
59 cd03811 GT1_WabH_like This fam 100.0 1.6E-31 3.5E-36 286.6 33.1 351 280-755 1-352 (353)
60 TIGR02918 accessory Sec system 100.0 2.5E-31 5.5E-36 307.0 31.7 280 405-769 209-499 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 7.7E-31 1.7E-35 296.8 31.3 276 405-764 125-406 (407)
62 COG0297 GlgA Glycogen synthase 100.0 1.8E-30 3.9E-35 294.6 31.8 437 279-770 1-478 (487)
63 PLN02275 transferase, transfer 100.0 2E-29 4.4E-34 281.7 31.2 318 318-728 23-370 (371)
64 cd03804 GT1_wbaZ_like This fam 100.0 1.4E-29 3E-34 279.2 26.4 264 405-763 81-350 (351)
65 cd04949 GT1_gtfA_like This fam 100.0 6.3E-29 1.4E-33 276.0 29.1 273 406-763 98-372 (372)
66 PLN02501 digalactosyldiacylgly 100.0 3.7E-28 8.1E-33 278.9 34.7 279 395-769 425-709 (794)
67 PHA01630 putative group 1 glyc 100.0 8.3E-29 1.8E-33 272.5 26.5 258 413-770 52-331 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 9.1E-27 2E-31 265.5 31.5 329 405-769 146-586 (590)
69 PRK00726 murG undecaprenyldiph 99.9 2.1E-25 4.4E-30 247.4 32.0 343 279-768 2-356 (357)
70 PHA01633 putative glycosyl tra 99.9 3.6E-25 7.8E-30 242.4 31.8 225 471-765 89-335 (335)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 3E-25 6.4E-30 254.9 27.1 312 407-765 131-457 (460)
72 cd03785 GT1_MurG MurG is an N- 99.9 2.6E-24 5.7E-29 236.9 30.6 322 301-760 9-348 (350)
73 TIGR01133 murG undecaprenyldip 99.9 8.1E-24 1.8E-28 232.9 30.3 315 318-761 19-346 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 7.7E-24 1.7E-28 242.1 30.0 320 395-766 116-453 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 1.9E-23 4.1E-28 237.6 29.9 285 406-768 123-418 (425)
76 PRK13609 diacylglycerol glucos 99.9 6.8E-22 1.5E-26 221.3 27.0 262 406-768 103-370 (380)
77 PF00534 Glycos_transf_1: Glyc 99.9 3.7E-23 8.1E-28 204.8 14.5 160 569-749 12-172 (172)
78 PLN03063 alpha,alpha-trehalose 99.9 9.5E-22 2.1E-26 238.0 28.3 323 395-769 136-477 (797)
79 cd04950 GT1_like_1 Glycosyltra 99.9 1.1E-20 2.3E-25 211.6 32.7 266 405-768 100-370 (373)
80 TIGR02094 more_P_ylases alpha- 99.9 7.9E-21 1.7E-25 222.7 28.7 350 393-767 148-598 (601)
81 PRK14501 putative bifunctional 99.9 7.9E-21 1.7E-25 229.7 26.1 322 395-770 122-463 (726)
82 PLN02605 monogalactosyldiacylg 99.9 1.9E-20 4.1E-25 210.3 27.0 264 405-767 98-379 (382)
83 cd01635 Glycosyltransferase_GT 99.9 3.3E-20 7.2E-25 188.4 24.0 121 577-713 109-229 (229)
84 COG0438 RfaG Glycosyltransfera 99.8 5E-19 1.1E-23 187.4 28.4 292 408-771 84-378 (381)
85 PRK13608 diacylglycerol glucos 99.8 8.4E-19 1.8E-23 197.7 26.0 270 395-768 95-370 (391)
86 TIGR02398 gluc_glyc_Psyn gluco 99.8 4.1E-17 8.9E-22 186.6 30.9 314 407-766 132-479 (487)
87 TIGR00236 wecB UDP-N-acetylglu 99.8 4.6E-18 1E-22 189.5 21.5 283 394-765 76-363 (365)
88 PRK09814 beta-1,6-galactofuran 99.8 2.1E-17 4.5E-22 182.5 25.7 244 407-761 63-323 (333)
89 cd04299 GT1_Glycogen_Phosphory 99.8 1.1E-16 2.4E-21 191.0 29.0 341 402-766 243-686 (778)
90 PRK00025 lpxB lipid-A-disaccha 99.8 2.2E-16 4.8E-21 176.5 26.7 250 405-750 83-356 (380)
91 cd03786 GT1_UDP-GlcNAc_2-Epime 99.7 1.3E-16 2.8E-21 176.8 24.3 259 395-743 79-345 (363)
92 KOG1387 Glycosyltransferase [C 99.7 1.5E-15 3.2E-20 160.5 30.1 290 405-767 148-456 (465)
93 PLN03064 alpha,alpha-trehalose 99.7 1.9E-15 4E-20 183.1 27.9 319 396-767 221-559 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 1.4E-14 3E-19 168.2 26.0 170 571-766 318-518 (519)
95 PF05693 Glycogen_syn: Glycoge 99.6 3.4E-14 7.4E-19 162.0 23.6 329 407-770 142-582 (633)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 6.8E-15 1.5E-19 139.8 8.6 130 572-729 2-133 (135)
97 KOG2941 Beta-1,4-mannosyltrans 99.5 2.2E-12 4.7E-17 137.0 26.1 378 320-765 33-437 (444)
98 TIGR00215 lpxB lipid-A-disacch 99.5 3.8E-12 8.2E-17 143.5 24.5 249 405-747 87-363 (385)
99 PF13524 Glyco_trans_1_2: Glyc 99.3 6.1E-12 1.3E-16 112.4 10.8 92 668-765 1-92 (92)
100 PF00982 Glyco_transf_20: Glyc 99.3 3.8E-10 8.2E-15 129.8 25.8 321 395-766 130-471 (474)
101 PF13439 Glyco_transf_4: Glyco 99.3 3.3E-11 7.2E-16 117.9 11.5 167 299-534 9-177 (177)
102 PF13579 Glyco_trans_4_4: Glyc 99.2 2.1E-11 4.6E-16 117.3 9.3 160 302-527 1-160 (160)
103 PRK10117 trehalose-6-phosphate 99.2 2.8E-09 6E-14 121.6 26.5 322 396-768 113-452 (474)
104 PRK12446 undecaprenyldiphospho 99.2 1.2E-08 2.7E-13 113.7 30.3 248 405-766 89-348 (352)
105 COG0707 MurG UDP-N-acetylgluco 99.1 7E-08 1.5E-12 107.5 32.1 240 405-750 89-339 (357)
106 PLN02205 alpha,alpha-trehalose 99.1 1.5E-08 3.1E-13 124.1 28.6 311 409-766 203-548 (854)
107 TIGR02919 accessory Sec system 99.1 1.9E-08 4E-13 114.9 24.2 143 572-749 282-425 (438)
108 COG0380 OtsA Trehalose-6-phosp 99.1 6.8E-08 1.5E-12 110.0 27.3 322 395-766 136-476 (486)
109 cd03784 GT1_Gtf_like This fami 99.0 1.1E-07 2.3E-12 107.4 25.8 135 570-746 238-382 (401)
110 PF08323 Glyco_transf_5: Starc 98.9 2.7E-09 5.8E-14 113.1 9.1 182 280-488 1-229 (245)
111 TIGR01426 MGT glycosyltransfer 98.9 1.9E-06 4.1E-11 97.3 31.9 111 639-766 273-389 (392)
112 PF09314 DUF1972: Domain of un 98.9 4.4E-08 9.5E-13 98.8 16.2 182 278-529 1-185 (185)
113 TIGR03492 conserved hypothetic 98.8 1.3E-06 2.8E-11 99.1 27.6 166 570-765 203-394 (396)
114 PF13528 Glyco_trans_1_3: Glyc 98.8 6.2E-07 1.3E-11 97.9 23.4 116 570-726 191-315 (318)
115 COG1519 KdtA 3-deoxy-D-manno-o 98.8 7.2E-06 1.6E-10 91.2 30.9 276 406-768 122-416 (419)
116 TIGR03568 NeuC_NnaA UDP-N-acet 98.8 1E-06 2.3E-11 98.8 24.6 275 394-766 83-364 (365)
117 PF13477 Glyco_trans_4_2: Glyc 98.5 1.7E-06 3.8E-11 82.6 14.4 123 318-482 15-139 (139)
118 TIGR00661 MJ1255 conserved hyp 98.4 3.8E-05 8.3E-10 84.6 22.2 69 640-718 228-302 (321)
119 PF13844 Glyco_transf_41: Glyc 98.4 9.6E-06 2.1E-10 92.7 17.3 185 558-769 273-466 (468)
120 TIGR03590 PseG pseudaminic aci 98.3 6.8E-05 1.5E-09 81.1 21.7 97 572-697 171-268 (279)
121 PHA03392 egt ecdysteroid UDP-g 98.3 0.00091 2E-08 78.4 31.2 138 572-748 297-445 (507)
122 PF02350 Epimerase_2: UDP-N-ac 98.2 8.1E-05 1.8E-09 83.0 19.0 279 395-766 58-344 (346)
123 KOG3742 Glycogen synthase [Car 98.1 1.2E-05 2.7E-10 88.4 10.8 99 665-764 500-607 (692)
124 COG1819 Glycosyl transferases, 98.0 0.00032 6.9E-09 80.0 20.7 159 570-768 236-400 (406)
125 PF04007 DUF354: Protein of un 98.0 0.0012 2.6E-08 73.2 22.9 276 317-727 17-306 (335)
126 PF02684 LpxB: Lipid-A-disacch 97.8 0.0027 5.8E-08 71.4 22.8 103 569-696 181-286 (373)
127 PLN02448 UDP-glycosyltransfera 97.8 0.029 6.3E-07 65.1 30.7 141 570-747 273-428 (459)
128 COG3914 Spy Predicted O-linked 97.7 0.00081 1.8E-08 77.2 16.6 180 562-768 422-612 (620)
129 PRK14986 glycogen phosphorylas 97.6 0.00074 1.6E-08 81.5 14.7 151 563-723 534-702 (815)
130 COG0763 LpxB Lipid A disacchar 97.6 0.0043 9.3E-08 68.8 19.4 201 404-696 82-290 (381)
131 cd04300 GT1_Glycogen_Phosphory 97.6 0.0014 3.1E-08 79.2 17.0 151 563-723 521-689 (797)
132 COG4641 Uncharacterized protei 97.4 0.01 2.2E-07 65.6 19.1 194 518-768 160-360 (373)
133 COG0058 GlgP Glucan phosphoryl 97.4 0.0035 7.6E-08 75.0 16.0 144 563-715 478-630 (750)
134 TIGR02093 P_ylase glycogen/sta 97.2 0.0023 4.9E-08 77.3 12.7 151 563-723 518-686 (794)
135 COG0381 WecB UDP-N-acetylgluco 97.2 0.16 3.4E-06 56.9 25.8 276 405-770 90-371 (383)
136 PRK01021 lpxB lipid-A-disaccha 97.2 0.038 8.3E-07 65.2 22.0 197 405-695 308-513 (608)
137 PRK02797 4-alpha-L-fucosyltran 97.2 0.056 1.2E-06 58.7 21.2 170 572-770 145-317 (322)
138 PRK10017 colanic acid biosynth 97.1 0.26 5.6E-06 56.7 27.3 141 588-749 260-406 (426)
139 PLN02554 UDP-glycosyltransfera 97.0 0.88 1.9E-05 53.3 31.2 88 641-741 342-447 (481)
140 PF12000 Glyco_trans_4_3: Gkyc 97.0 0.0077 1.7E-07 60.4 11.7 109 395-533 55-170 (171)
141 PLN03007 UDP-glucosyltransfera 96.9 0.69 1.5E-05 54.2 28.4 78 640-729 344-438 (482)
142 PLN02863 UDP-glucoronosyl/UDP- 96.7 2.1 4.5E-05 50.2 32.7 79 641-729 343-431 (477)
143 PLN02173 UDP-glucosyl transfer 96.6 2.1 4.5E-05 49.7 32.3 93 640-747 316-419 (449)
144 PRK14985 maltodextrin phosphor 96.6 0.005 1.1E-07 74.3 8.4 151 563-723 520-688 (798)
145 PLN02208 glycosyltransferase f 96.6 2.2 4.7E-05 49.5 34.0 64 680-747 340-414 (442)
146 PLN02562 UDP-glycosyltransfera 96.4 2.9 6.3E-05 48.5 32.3 138 571-741 273-419 (448)
147 PF00343 Phosphorylase: Carboh 96.4 0.16 3.6E-06 61.0 18.8 148 563-720 435-600 (713)
148 PF07429 Glyco_transf_56: 4-al 96.3 0.3 6.5E-06 53.9 19.0 128 572-713 184-313 (360)
149 PLN02210 UDP-glucosyl transfer 96.0 4.3 9.3E-05 47.3 33.1 133 571-729 269-413 (456)
150 PF08288 PIGA: PIGA (GPI ancho 95.9 0.042 9.2E-07 48.5 8.1 72 359-441 13-86 (90)
151 PRK14089 ipid-A-disaccharide s 95.8 0.22 4.8E-06 55.7 15.7 91 573-696 168-261 (347)
152 PLN02670 transferase, transfer 95.7 5.8 0.00013 46.4 32.6 85 679-768 367-464 (472)
153 COG1817 Uncharacterized protei 95.7 1.4 3.1E-05 47.9 20.2 111 582-728 198-311 (346)
154 PF06258 Mito_fiss_Elm1: Mitoc 95.7 0.9 2E-05 50.1 19.5 109 570-699 145-259 (311)
155 COG4671 Predicted glycosyl tra 95.6 3.6 7.8E-05 45.7 23.0 133 570-729 218-363 (400)
156 PLN00414 glycosyltransferase f 95.5 6.7 0.00015 45.5 33.3 87 652-748 319-416 (446)
157 PLN02555 limonoid glucosyltran 95.4 7.4 0.00016 45.6 31.6 94 640-748 336-441 (480)
158 PLN02410 UDP-glucoronosyl/UDP- 95.1 9.1 0.0002 44.5 31.5 92 641-747 324-421 (451)
159 COG3980 spsG Spore coat polysa 95.1 1.3 2.9E-05 47.5 17.2 140 571-747 158-305 (318)
160 KOG1050 Trehalose-6-phosphate 94.0 4.1 9E-05 49.8 20.5 152 570-730 274-439 (732)
161 PF04464 Glyphos_transf: CDP-G 93.5 0.53 1.1E-05 52.8 11.2 133 562-729 184-334 (369)
162 PLN00164 glucosyltransferase; 93.3 21 0.00045 41.9 30.8 64 680-747 368-444 (480)
163 COG3660 Predicted nucleoside-d 93.1 6.8 0.00015 41.8 17.4 112 569-700 159-276 (329)
164 PF11440 AGT: DNA alpha-glucos 92.7 17 0.00037 39.2 21.7 134 576-728 187-350 (355)
165 PF04101 Glyco_tran_28_C: Glyc 90.5 0.17 3.7E-06 49.9 2.4 91 641-746 55-155 (167)
166 PF00201 UDPGT: UDP-glucoronos 90.0 0.79 1.7E-05 53.5 7.9 131 570-742 275-416 (500)
167 PF05159 Capsule_synth: Capsul 89.9 18 0.00039 38.7 17.6 122 569-720 114-243 (269)
168 cd03789 GT1_LPS_heptosyltransf 89.2 2.7 6E-05 45.1 10.7 99 574-696 124-224 (279)
169 PLN02992 coniferyl-alcohol glu 88.8 55 0.0012 38.5 31.6 78 642-729 339-425 (481)
170 PLN02764 glycosyltransferase f 88.8 54 0.0012 38.3 34.0 86 652-747 324-420 (453)
171 PLN03004 UDP-glycosyltransfera 87.6 7.8 0.00017 45.1 13.6 145 570-740 269-429 (451)
172 COG2327 WcaK Polysaccharide py 87.2 59 0.0013 36.9 27.0 99 630-741 255-357 (385)
173 PRK10422 lipopolysaccharide co 85.1 8 0.00017 43.2 11.7 103 571-695 183-287 (352)
174 PF01075 Glyco_transf_9: Glyco 84.1 8.2 0.00018 40.4 10.7 103 570-695 104-208 (247)
175 TIGR03609 S_layer_CsaB polysac 84.0 54 0.0012 35.5 17.4 86 587-695 190-275 (298)
176 TIGR02195 heptsyl_trn_II lipop 83.4 11 0.00023 41.6 11.8 100 571-695 173-276 (334)
177 PF12038 DUF3524: Domain of un 82.8 4.7 0.0001 40.2 7.5 81 405-493 57-138 (168)
178 PLN03015 UDP-glucosyl transfer 82.8 1.1E+02 0.0023 36.1 30.6 72 652-729 342-424 (470)
179 PLN02152 indole-3-acetate beta 82.5 19 0.00042 41.9 13.8 140 571-729 261-415 (455)
180 PF11997 DUF3492: Domain of un 82.1 3.1 6.6E-05 45.0 6.6 80 406-485 171-256 (268)
181 KOG0853 Glycosyltransferase [C 81.6 6.1 0.00013 46.1 9.0 102 468-603 203-304 (495)
182 TIGR02193 heptsyl_trn_I lipopo 81.2 35 0.00077 37.2 14.8 99 571-695 179-279 (319)
183 TIGR02201 heptsyl_trn_III lipo 79.8 19 0.0004 40.0 12.0 102 572-695 182-285 (344)
184 PLN02167 UDP-glycosyltransfera 77.4 53 0.0012 38.5 15.3 79 641-729 340-432 (475)
185 PF10087 DUF2325: Uncharacteri 77.2 8.8 0.00019 34.6 7.0 84 606-704 2-90 (97)
186 KOG4626 O-linked N-acetylgluco 77.0 29 0.00063 41.3 12.4 191 560-778 749-947 (966)
187 COG0859 RfaF ADP-heptose:LPS h 76.2 19 0.00042 39.9 10.8 98 572-695 176-276 (334)
188 PRK10964 ADP-heptose:LPS hepto 72.3 29 0.00062 38.1 10.9 97 573-695 180-278 (322)
189 PLN02534 UDP-glycosyltransfera 71.9 2.1E+02 0.0046 33.7 33.1 77 641-729 344-442 (491)
190 PF10933 DUF2827: Protein of u 70.2 42 0.00091 37.7 11.2 154 571-750 189-345 (364)
191 PRK05562 precorrin-2 dehydroge 69.2 1.6E+02 0.0034 31.1 15.4 139 588-753 35-180 (223)
192 PRK10916 ADP-heptose:LPS hepto 68.9 44 0.00095 37.1 11.5 100 572-695 181-286 (348)
193 PF03401 TctC: Tripartite tric 68.6 89 0.0019 33.7 13.5 151 572-747 78-244 (274)
194 PF06925 MGDG_synth: Monogalac 65.7 25 0.00054 34.9 7.9 60 405-487 87-150 (169)
195 PF01975 SurE: Survival protei 65.3 56 0.0012 33.6 10.5 38 279-342 1-38 (196)
196 PF08660 Alg14: Oligosaccharid 65.0 18 0.00039 36.3 6.7 64 405-487 90-159 (170)
197 PLN02207 UDP-glycosyltransfera 64.8 1.1E+02 0.0024 35.8 14.1 135 570-729 274-424 (468)
198 PRK00676 hemA glutamyl-tRNA re 64.3 1.5E+02 0.0033 33.2 14.3 125 602-750 173-305 (338)
199 PF03033 Glyco_transf_28: Glyc 63.3 5.8 0.00013 37.4 2.7 28 301-340 8-35 (139)
200 KOG1192 UDP-glucuronosyl and U 61.3 2E+02 0.0043 33.3 15.6 142 571-746 277-433 (496)
201 PF04413 Glycos_transf_N: 3-De 55.7 66 0.0014 32.7 9.0 68 407-487 95-162 (186)
202 PF05686 Glyco_transf_90: Glyc 53.8 36 0.00078 38.9 7.4 82 686-771 234-319 (395)
203 COG0373 HemA Glutamyl-tRNA red 53.1 4.2E+02 0.009 30.7 16.5 124 627-778 212-341 (414)
204 TIGR00715 precor6x_red precorr 53.0 44 0.00095 35.9 7.5 54 666-727 198-253 (256)
205 PF04230 PS_pyruv_trans: Polys 50.9 2.9E+02 0.0063 28.2 16.5 95 584-696 189-283 (286)
206 PRK02122 glucosamine-6-phospha 49.3 54 0.0012 40.0 8.3 43 275-340 366-408 (652)
207 smart00672 CAP10 Putative lipo 49.0 77 0.0017 34.0 8.6 48 720-771 203-250 (256)
208 COG1703 ArgK Putative periplas 48.4 2.7E+02 0.0058 30.8 12.4 103 318-440 70-176 (323)
209 TIGR01470 cysG_Nterm siroheme 47.8 3.3E+02 0.0072 28.0 14.4 137 590-753 21-165 (205)
210 COG2910 Putative NADH-flavin r 43.7 23 0.0005 36.2 3.3 33 279-340 1-33 (211)
211 COG0052 RpsB Ribosomal protein 40.0 4.6E+02 0.01 28.1 12.3 118 582-717 42-203 (252)
212 COG1618 Predicted nucleotide k 39.5 4.2E+02 0.0091 26.8 12.7 44 274-341 1-44 (179)
213 PRK04020 rps2P 30S ribosomal p 39.0 1.4E+02 0.0031 31.0 8.3 112 582-717 47-161 (204)
214 PRK10840 transcriptional regul 38.8 4.2E+02 0.0092 26.7 12.1 109 604-729 4-124 (216)
215 TIGR00087 surE 5'/3'-nucleotid 37.8 5.3E+02 0.011 27.5 12.7 36 404-439 83-129 (244)
216 PRK13932 stationary phase surv 37.7 5.3E+02 0.011 27.8 12.7 35 404-438 88-133 (257)
217 KOG1021 Acetylglucosaminyltran 37.4 2.3E+02 0.0049 33.2 10.8 96 656-757 335-433 (464)
218 KOG0780 Signal recognition par 37.3 7E+02 0.015 28.7 15.7 175 575-769 157-342 (483)
219 TIGR03642 cas_csx13 CRISPR-ass 36.0 1.5E+02 0.0032 28.4 7.3 100 318-430 9-116 (124)
220 TIGR02990 ectoine_eutA ectoine 35.4 2.6E+02 0.0055 29.8 9.9 34 405-438 179-214 (239)
221 PF15024 Glyco_transf_18: Glyc 33.8 3.7E+02 0.008 32.2 11.5 156 571-771 276-457 (559)
222 COG1647 Esterase/lipase [Gener 33.2 1.6E+02 0.0035 31.1 7.5 32 406-437 83-114 (243)
223 PF13407 Peripla_BP_4: Peripla 33.0 3.5E+02 0.0076 27.8 10.6 77 622-698 12-89 (257)
224 PF09752 DUF2048: Uncharacteri 32.2 4.9E+02 0.011 29.3 11.7 33 406-438 173-205 (348)
225 COG2236 Predicted phosphoribos 32.1 1E+02 0.0022 31.7 6.0 47 386-433 9-55 (192)
226 PRK06988 putative formyltransf 31.7 2.6E+02 0.0057 30.8 9.6 19 318-339 16-34 (312)
227 PRK13398 3-deoxy-7-phosphohept 31.5 6.3E+02 0.014 27.3 12.2 110 575-697 28-142 (266)
228 KOG0832 Mitochondrial/chloropl 30.9 5.6E+02 0.012 27.2 10.9 38 666-704 174-212 (251)
229 PRK08057 cobalt-precorrin-6x r 30.8 2.4E+02 0.0053 30.1 8.8 33 406-438 64-100 (248)
230 PF10649 DUF2478: Protein of u 29.3 1E+02 0.0022 30.8 5.2 40 656-695 84-129 (159)
231 COG3171 Uncharacterized protei 29.0 46 0.00099 31.0 2.5 30 232-261 25-59 (119)
232 TIGR00732 dprA DNA protecting 28.8 4.1E+02 0.0089 27.8 10.0 124 584-722 82-217 (220)
233 PF06258 Mito_fiss_Elm1: Mitoc 26.5 9E+02 0.02 26.7 13.3 138 570-716 111-258 (311)
234 PF05728 UPF0227: Uncharacteri 25.6 6.2E+02 0.013 25.7 10.4 30 410-439 61-90 (187)
235 cd01020 TroA_b Metal binding p 25.5 3.2E+02 0.007 29.1 8.8 129 658-797 46-175 (264)
236 PRK04531 acetylglutamate kinas 25.5 1.6E+02 0.0035 33.7 6.8 56 570-642 35-91 (398)
237 PRK03359 putative electron tra 25.5 2.6E+02 0.0057 30.1 8.0 34 407-440 112-149 (256)
238 TIGR01012 Sa_S2_E_A ribosomal 25.4 2E+02 0.0044 29.7 6.8 112 582-717 41-155 (196)
239 PF08672 APC2: Anaphase promot 25.1 32 0.00068 28.5 0.7 36 5-40 13-51 (60)
240 PF03016 Exostosin: Exostosin 24.5 1.7E+02 0.0036 31.3 6.5 70 655-725 227-299 (302)
241 PRK12342 hypothetical protein; 24.3 2.4E+02 0.0052 30.3 7.4 34 407-440 109-146 (254)
242 PLN00016 RNA-binding protein; 24.0 76 0.0017 35.6 3.8 20 318-341 71-90 (378)
243 COG2204 AtoC Response regulato 24.0 8.5E+02 0.018 28.6 12.2 108 604-730 5-121 (464)
244 cd07944 DRE_TIM_HOA_like 4-hyd 23.9 9.2E+02 0.02 25.9 14.6 154 583-756 104-265 (266)
245 COG1519 KdtA 3-deoxy-D-manno-o 23.6 5.6E+02 0.012 29.6 10.4 104 571-696 49-153 (419)
246 PF00731 AIRC: AIR carboxylase 22.2 7.7E+02 0.017 24.4 13.1 128 606-748 4-145 (150)
247 PRK10360 DNA-binding transcrip 22.1 7.2E+02 0.016 24.0 11.4 74 656-729 37-116 (196)
248 KOG2452 Formyltetrahydrofolate 21.8 89 0.0019 35.9 3.6 39 279-348 1-39 (881)
249 COG4088 Predicted nucleotide k 21.2 4.5E+02 0.0098 27.7 8.2 51 388-438 56-108 (261)
250 PF04844 Ovate: Transcriptiona 20.4 1.4E+02 0.003 24.8 3.5 45 10-55 10-54 (59)
251 PRK09140 2-dehydro-3-deoxy-6-p 20.1 9.2E+02 0.02 24.9 10.5 109 573-713 62-178 (206)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=1.8e-199 Score=1737.80 Aligned_cols=804 Identities=82% Similarity=1.307 Sum_probs=781.6
Q ss_pred CCCCCCCCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceee
Q 003636 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAI 80 (806)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 80 (806)
|++++|+|++||+|+++++|++|||+|++||+||+++||++||+|||+++|+++++++.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 56689999999999999999999999999999999999999999999999999987777788899999999999999999
Q ss_pred ecCCeEEEEEcCCCceEEEEEEecCcceeeecChHHHhhhhchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhh
Q 003636 81 VLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQ 160 (806)
Q Consensus 81 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (806)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+|+||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhhhhhcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCcc
Q 003636 161 FLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240 (806)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 240 (806)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+||||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHhhcCCCcccHhHhhcCCCCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHH
Q 003636 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 320 (806)
Q Consensus 241 ~w~~~~~~~~~~~~~l~~~~~~p~~~~l~~~~~~~p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa 320 (806)
||||||+||+|||++|+++|++|||++||+|++||||+|||++||+||+|+|.+++|.||||||++||++||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHH
Q 003636 321 LRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEI 400 (806)
Q Consensus 321 ~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i 400 (806)
++|+++||+|+|+|+|+||.+++..+++|++++|.+.++++++|+|+||++.++++++|++|+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEe
Q 003636 401 TAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (806)
Q Consensus 401 ~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt 480 (806)
.+..+++||+||+|||+++++|.++++++|||+|+|+|++++.|+..++.+|+..+..|++++++++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 77667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccc
Q 003636 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (806)
Q Consensus 481 ~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (806)
+|.++++++++.++||++|.+|+||++|++++|++++++|++|||||+|...|.|+.....+++.+++.|++++|++.+.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred ccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003636 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (806)
Q Consensus 561 ~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~ 640 (806)
++++|++.++++++|+++||+++.||++.|++|++++.+.+++++|+|||++.++.++.+.++.+++++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 99999887888999999999999999999999999998878899999999986556677788888889999999999999
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHH
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~ 720 (806)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++|||+||+|||||+.||+.|+|.+|++|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998887888899999999768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhchhhhhcHHHHHHHHhHHHHHHhhhhcccc
Q 003636 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLV 800 (806)
Q Consensus 721 la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 800 (806)
+|++|.+++++|..|++.|++|+++|++++.++|||+.++++++++..+||||+++++++|++++|||||||+||||+||
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 801 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELA 801 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHh
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 003636 801 STSN 804 (806)
Q Consensus 801 ~~~~ 804 (806)
++||
T Consensus 802 ~~~~ 805 (815)
T PLN00142 802 KTVP 805 (815)
T ss_pred hcCC
Confidence 9998
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=4.2e-193 Score=1684.61 Aligned_cols=782 Identities=75% Similarity=1.222 Sum_probs=759.0
Q ss_pred HHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeEEEEEcCCCceEEEEEEe
Q 003636 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVN 103 (806)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 103 (806)
|++|++||+||+++||++||+|||+++|+++|.++.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 68999999999999999999999999999999776667889999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHhhhhchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhhhcccCCCCCCchhHHHH
Q 003636 104 VYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDF 183 (806)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (806)
++||+||+|||+|||+|||+|||++.+++++|||||+|||++||+||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCchHHHHHHHHHHHHHhhcCC
Q 003636 184 LRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAP 263 (806)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~~~~~~p 263 (806)
||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHhHhhcCCCCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCC
Q 003636 264 DPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 343 (806)
Q Consensus 264 ~~~~l~~~~~~~p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~ 343 (806)
||++||+|++||||+|||++||+||+|+|.+++|.||||||++||++|||+||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccceeecCCCceEEEEecCCCccc-ccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003636 344 AKGTTCNQRLERVSGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (806)
Q Consensus 344 ~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva 422 (806)
..+++|+++.|.+.++++++|+|+|+++..+ ++++|++++++|||++.|+.++.+.+....+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 9899999999999999999999999999877 789999999999999999999999998777789999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccc
Q 003636 423 SLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502 (806)
Q Consensus 423 ~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f 502 (806)
.++++++|+|+|+|+|++++.|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCC
Q 003636 503 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 582 (806)
Q Consensus 503 ~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~ 582 (806)
|||++|++++|++++++|++|||||+|.+.|+|++....+....++.+++++|++.+.++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888899999999999999999998889999999999999
Q ss_pred cCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHH
Q 003636 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (806)
Q Consensus 583 ~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~l 662 (806)
+.||++.|++|+++++.+.++++|+|||++.++.++.|.++.+++++++++++++++.++|+|+|++.+..+.+++++++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999887778899999999987778889999899999999999999999999999876677788999999
Q ss_pred HccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHH
Q 003636 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (806)
Q Consensus 663 a~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~m 742 (806)
++++|+||+||++|+||++++|||+||+|||||++||+.|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhchhhhhcHHHHHHHHhHHHHHHhhhhcccccccCC
Q 003636 743 SDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLVSTSNH 805 (806)
Q Consensus 743 s~~ar~~v~~~ysw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 805 (806)
+++|++++.++|||+.++++++++.++|+||+++++++|++++|||||||+|||||||++||-
T Consensus 721 s~~a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 783 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPL 783 (784)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccC
Confidence 999999999999999999999999999999999999999999999999999999999999983
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=5.2e-171 Score=1392.63 Aligned_cols=550 Identities=76% Similarity=1.203 Sum_probs=475.5
Q ss_pred CCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeE
Q 003636 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFV 86 (806)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 86 (806)
||++||+|+|+++|++||++|++||+||+++||++||||||+++|+++|+++.++.++.+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 79999999999999999999999999999999999999999999999998777788889999999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecChHHHhhhhchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhh
Q 003636 87 AIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHL 166 (806)
Q Consensus 87 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (806)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCchH
Q 003636 167 SSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA 246 (806)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~ 246 (806)
|||||+|++++++|||||+.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccHhHhhcCCCCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHC
Q 003636 247 EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ 326 (806)
Q Consensus 247 ~~~~~~~~~l~~~~~~p~~~~l~~~~~~~p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~ 326 (806)
+||+|||++|+++|++|||++||+|++||||+|+||++||||||+|++|+|+||||||++||+|||||||++|..+++.+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCC
Q 003636 327 GLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQG 406 (806)
Q Consensus 327 G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~ 406 (806)
|.+|.|+|+|+|+.+|++.|++|++++|++.+++|++|+|+||++.++++++|+||+++|||+++|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHH
Q 003636 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (806)
Q Consensus 407 kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (806)
+||+||+||+++|++|+++++++|||+|+|+|+++++||+.++++|++++.+|||+|||++|.++|+.||+|||||+||+
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccC
Q 003636 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 556 (806)
Q Consensus 487 ~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~ 556 (806)
+|+++++|||++|.+||||+||++++||++|+|||+|||||+|.++|+|++++.+|++.+|++||++||+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 4
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=9.5e-60 Score=524.81 Aligned_cols=491 Identities=42% Similarity=0.636 Sum_probs=435.0
Q ss_pred ecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCchHHHHHHHHHHHHHhhcCCCcccHhHhhcC
Q 003636 195 MLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR 274 (806)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~~~~~~p~~~~l~~~~~~ 274 (806)
|+||++++.+.+|+++.+|+..++.. .+||+..|.+.+++.+++++||+++.++.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999888
Q ss_pred CCCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccce
Q 003636 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (806)
Q Consensus 275 ~p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e 354 (806)
++. ++|.||+||+++|+++++++|+.++..+..+++.+++++|.+++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 455 8999999999999999999999999999999999999999999999998765 4556
Q ss_pred eecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003636 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (806)
Q Consensus 355 ~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v 434 (806)
...++.+++|+++|+. +..+|+ +.+||++..|+ .+...+.+.+.+ ||++|.++++.+..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 6677778999999993 456677 78899999888 555566666666 999999999999999999999999999
Q ss_pred EEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccc-cceeecc
Q 003636 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHG 513 (806)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~-l~~~~~G 513 (806)
++.|.++..+++.++.+|+.+...|+++++|.++...++++| ++++++++++...+.++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999997 9999999
Q ss_pred CCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHH
Q 003636 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (806)
Q Consensus 514 i~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea 593 (806)
++++.++++.+++|.|.+.+.|.- ..+++.+. +
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~------~~~~~~i~-------------------~---------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAF------TLLHDSIP-------------------E---------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhH------HhhhcccC-------------------C----------------------
Confidence 999999999999999999887721 11111110 0
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECC
Q 003636 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (806)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS 673 (806)
...++.+++++|+. .++++++|+.++.++|+++++++++.++++|.-.+ ....+.|++++++..+|++|+
T Consensus 305 -----~~~~~~hl~~~g~~--G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s---~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR--GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPS---TTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCC--CccccchhhHHHHHHHHHHHHHhCccCceEEEecC---CchHHHHHHHHhcceEEecCC
Confidence 12245677777732 15688999999999999999999996555555333 334566999999888999999
Q ss_pred CCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHH---HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003636 674 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD---QAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (806)
Q Consensus 674 ~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e---~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v 750 (806)
. |.||++++|||+||+|||||+.||+.|||.++.+|++++| +.+ .+|++| .+|..||++|.+|+++|+++|
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~----~kl~~~p~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADAL----LKLRRDPELWARMGKNGLKRV 448 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHH----HHHhcCHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999 444 355555 677799999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHHhchhhhhcHHHHHHHHhHHHHHHhhhhc
Q 003636 751 YERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFR 797 (806)
Q Consensus 751 ~~~ysw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 797 (806)
++.|||+.+.+++.++...|.+|+.++...+...+||++|||.|+||
T Consensus 449 ~e~fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 449 KEMFSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred HHHHhHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999986
No 5
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.1e-57 Score=546.62 Aligned_cols=453 Identities=25% Similarity=0.460 Sum_probs=353.8
Q ss_pred cceEEEEcccccCccccc-cC-CCCcccccchhHHHHHHHHHHHHHHHHHCC--CceeeceeEEeccCCCC-CCCccccc
Q 003636 278 VFNVVILSPHGYFGQANV-LG-LPDTGGQVVYILDQVRALENEMLLRIKRQG--LDISPKILIVTRLIPDA-KGTTCNQR 352 (806)
Q Consensus 278 ~~rIvivs~h~~~~~~~~-lG-~p~tGG~~vyvl~~~raL~~eLa~~L~~~G--~eV~~~ilVvT~~~~~~-~g~~~~~~ 352 (806)
.|+|++||+||.|...++ +| .+|||||.+||+ +||++|++.| |+|+ |+|+.+.+. .+.+|.++
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 589999999999988776 88 599999999999 5555668888 7999 999998643 23446666
Q ss_pred ceee------------cCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHH-------c----CCCce
Q 003636 353 LERV------------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-------L----QGFPD 409 (806)
Q Consensus 353 ~e~i------------~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~-------~----~~kPD 409 (806)
.|.+ ...+|++|+|+|+++.. +++++..+|||+..|...+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5433 34468999999999863 36889999999999999998877541 1 12499
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCC----CChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHH
Q 003636 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP----DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (806)
Q Consensus 410 lIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~----~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 485 (806)
|||+|||+++.++.++++.+|+|+|+|.|+++..|+. .+...+......|++..++.+|..+++.||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999877653 223355566778889999999999999999999999999
Q ss_pred Hhhccccccccccccccccccccee-----eccCC---CCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCc
Q 003636 486 IAGTKNTVGQYESHTAFTLPGLYRV-----VHGID---VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDP 557 (806)
Q Consensus 486 ~~~~k~~v~qy~~~~~f~~p~l~~~-----~~Gi~---v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~ 557 (806)
++ +||.-|.+|. |.++++ ..|+. .+.+|+.|||||||.+.|.|......+... ..++....+
T Consensus 393 ~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 87 3555555555 554444 33433 346799999999999999986432211000 000000000
Q ss_pred c-----ccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCC--CeEEEEEeCcCCCCCCcchHHHHHHHHH
Q 003636 558 E-----QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKM 630 (806)
Q Consensus 558 ~-----~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~~~~l 630 (806)
. .. ..++ .++++++|+++||+++.||++.|++|++++++..+ ++. +|+|++++ .+.......++...+
T Consensus 463 ~~~~~~~l-~r~~--~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd-~d~l~~~~~~~l~~L 537 (1050)
T TIGR02468 463 DPPIWSEI-MRFF--TNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDD-IDEMSSGSSSVLTSV 537 (1050)
T ss_pred cchhhHHH-Hhhc--ccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCch-hhhhhccchHHHHHH
Confidence 0 00 1122 26789999999999999999999999999875433 444 46677654 111111223456778
Q ss_pred HHHHHHcCCCCcEEEcccccCcCChHHHHHHHHcc---CcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccC
Q 003636 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT---KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG 707 (806)
Q Consensus 631 ~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~a---aDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg 707 (806)
.++++++++.++|.|+| .++.+++..+|+.+ +|+||+||++|+||++++||||||+|||||+.||+.|+|.++
T Consensus 538 ~~li~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g 613 (1050)
T TIGR02468 538 LKLIDKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVL 613 (1050)
T ss_pred HHHHHHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccC
Confidence 89999999999999999 66678888888742 279999999999999999999999999999999999999999
Q ss_pred CcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 708 ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 708 ~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
.+|++++|+|++++|++|.+++ +|++.|++|+++|++++ ++|||+.++++|++.+...
T Consensus 614 ~nGlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 614 DNGLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred CcEEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 9999999999999999996654 89999999999999998 5799999999999998766
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=8.9e-51 Score=463.59 Aligned_cols=424 Identities=29% Similarity=0.546 Sum_probs=316.8
Q ss_pred ceEEEEcccccCcccc-ccCC-CCcccccchhHHHHHHHHHHHHHHHHHCCC--ceeeceeEEeccCCCCC-CCcccccc
Q 003636 279 FNVVILSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKRQGL--DISPKILIVTRLIPDAK-GTTCNQRL 353 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~-~lG~-p~tGG~~vyvl~~~raL~~eLa~~L~~~G~--eV~~~ilVvT~~~~~~~-g~~~~~~~ 353 (806)
+||+++|+||+|+|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+.+++.. +..+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4799999999999987 6774 99999999999 77777899997 899 9998765421 12232233
Q ss_pred eeecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003636 354 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (806)
Q Consensus 354 e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~ 433 (806)
+.+ ..+++++|+|+.+. .+.++...++|+..|...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 222 24789999998653 23455667888888877777766532 34799999999888899999999999999
Q ss_pred EEEecCCCcccCC---CChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhccccccccccccccccccccee
Q 003636 434 CTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 510 (806)
Q Consensus 434 v~t~H~l~~~k~~---~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~ 510 (806)
|+|.|+....+.. .....+..+...|++..+...++.+++.+|.||++|..++.. . +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------Q------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------H------------HHh
Confidence 9999986432211 111112222233444444456788999999999999765431 1 111
Q ss_pred eccCCCCCCcEEEecCCCCCCCCCCCchHHHH--HHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHH
Q 003636 511 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR--LTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMT 588 (806)
Q Consensus 511 ~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~r--l~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~ 588 (806)
..|++ +.|+.+||||+|.+.|.|....... .+. ..+.++. ++++++|+++||+.+.||++
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~--------------~~~~~~~--~~~~~~i~~vGrl~~~Kg~~ 264 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETSEIDN--------------LLAPFLK--DPEKPPILAISRPDRRKNIP 264 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccchhHHH--------------HHHhhcc--ccCCcEEEEEcCCcccCCHH
Confidence 12343 7799999999999999875322110 000 0011232 45678999999999999999
Q ss_pred HHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHcc--
Q 003636 589 GLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT-- 665 (806)
Q Consensus 589 ~Llea~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~a-- 665 (806)
.|++|++++....+..+++ |+|+|++ .+.......++.+++.++++++++.++|+|+| .++.+++..+|+.+
T Consensus 265 ~li~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~ 339 (439)
T TIGR02472 265 SLVEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAAR 339 (439)
T ss_pred HHHHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhh
Confidence 9999998754333334444 5676654 12222222334566778899999999999999 66678899988842
Q ss_pred -CcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHH
Q 003636 666 -KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISD 744 (806)
Q Consensus 666 -aDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~ 744 (806)
+|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|+|+++++++|.+++ +|++.+++|++
T Consensus 340 ~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~ 415 (439)
T TIGR02472 340 SRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSR 415 (439)
T ss_pred cCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHH
Confidence 2999999999999999999999999999999999999999999999999999999999997655 79999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHH
Q 003636 745 GGLKRIYERYTWKIYSERLMTLA 767 (806)
Q Consensus 745 ~ar~~v~~~ysw~~~a~~ll~ly 767 (806)
+|++++.++|||+.++++|+++.
T Consensus 416 ~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 416 NGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999875
No 7
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=4.9e-44 Score=411.12 Aligned_cols=427 Identities=18% Similarity=0.204 Sum_probs=291.7
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccc-ccceee-
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRLERV- 356 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~-~~~e~i- 356 (806)
|||++||.+.+|. ..+||+..+|. .|+++|+++||+|. |+|+.++........ .....+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998854 45899999999 67777799999999 999887643211000 000000
Q ss_pred --------cCCCceEEEEecCCCcccccccccccCCchhhH---H---HHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003636 357 --------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---E---TFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (806)
Q Consensus 357 --------~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl---~---~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva 422 (806)
...+++++++++... +..+..++.|. . .|...+...+. ..+.+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~-------~~~~~~~y~~~d~~~r~~~f~~~~~~~~~-~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPH-------LFDRPSGYGYPDNGERFAFFSWAAAEFAE-GLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHH-------HcCCCCCCCCcChHHHHHHHHHHHHHHHH-hcCCCCceEEECCcHHHHHH
Confidence 012467777776522 12223333332 1 23444444443 34679999999999999999
Q ss_pred HHHHHHc-----CCcEEEEecCCCcccCCCC-hh-----hHhhh-hhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcc
Q 003636 423 SLLAYKM-----GITQCTIAHALEKTKYPDS-DI-----YWKKF-DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 490 (806)
Q Consensus 423 ~lla~~l-----gvp~v~t~H~l~~~k~~~s-~~-----~~~~l-~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k 490 (806)
.++++.+ ++|+|+|+|++........ .. .+..+ .....+...+...+.+++.||.|+|+|+..++.+.
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 8888663 7999999999864321110 00 00000 00111111223455679999999999998765322
Q ss_pred cccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCC
Q 003636 491 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDR 570 (806)
Q Consensus 491 ~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~ 570 (806)
+. + .++.+.+.+ .....|+.+|+||||.+.|.|..+.......-...++.+..++...++++|+. ++
T Consensus 214 ~~---~---~~~gl~~~~------~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 214 TP---E---FGYGLEGLL------RARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred cc---c---CCcChHHHH------HhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 11 0 001111111 12256899999999999998864321000000000111111223345667873 34
Q ss_pred CCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-cccc
Q 003636 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAAQ 649 (806)
Q Consensus 571 ~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~f-lG~~ 649 (806)
+.++|+++||+.++||++.|++|++++.+. +++|+|+|+|.. .+.+.+++++++++ +++.+ .|+
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g~- 345 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIGY- 345 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEeC-
Confidence 789999999999999999999999998763 799999998854 23567888888886 45664 452
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccC------CcEEEECCCCHHHHHH
Q 003636 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQAAE 723 (806)
Q Consensus 650 ~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg------~~G~li~p~d~e~la~ 723 (806)
+.+.+..+++ ++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|++++++
T Consensus 346 ----~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~ 420 (466)
T PRK00654 346 ----DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLR 420 (466)
T ss_pred ----CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHH
Confidence 3344567777 5999999999999999999999999999999999999999988 8999999999999999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 724 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 724 aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
+|.+++. +..|++.|.+|++++++ ++|||+.++++|+++|+.
T Consensus 421 ~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 421 ALRRALE-LYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 9988764 33578889999988863 789999999999999974
No 8
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.4e-42 Score=408.94 Aligned_cols=489 Identities=15% Similarity=0.175 Sum_probs=327.2
Q ss_pred chhHHHHhhhcCCccccCchHHHHHHHH---------HHHHHhhcCCCcccHhHhhc--CCC--CcceEEEEcccccCcc
Q 003636 226 FSQFEYVLQGMGFEKGWGDTAEHVLEMM---------HLLLDILQAPDPSTLEKFLG--RLP--MVFNVVILSPHGYFGQ 292 (806)
Q Consensus 226 ~~~~~~~~~~~g~~~~w~~~~~~~~~~~---------~~l~~~~~~p~~~~l~~~~~--~~p--~~~rIvivs~h~~~~~ 292 (806)
|++.--+...|=+++--+.+-+..+-.| ..-.++.+.+|...+..|+. +-| +.|||++||....|-
T Consensus 416 ~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~- 494 (977)
T PLN02939 416 WSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV- 494 (977)
T ss_pred HHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-
Confidence 3444444555545554454444333333 13345566777776666664 222 459999999988754
Q ss_pred ccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccc-c-----cce-eecC-------
Q 003636 293 ANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-Q-----RLE-RVSG------- 358 (806)
Q Consensus 293 ~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~-~-----~~e-~i~g------- 358 (806)
..+||..-++- .|.++|+++||+|. |+++.++........ . ..+ ...+
T Consensus 495 ------aKtGGLaDVv~--------sLPkAL~~~GhdV~----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v 556 (977)
T PLN02939 495 ------AKVGGLADVVS--------GLGKALQKKGHLVE----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKI 556 (977)
T ss_pred ------cccccHHHHHH--------HHHHHHHHcCCeEE----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEE
Confidence 56899999999 66777799999999 999988643211000 0 000 0000
Q ss_pred ----CCceEEEEecCCCcccccccccccCCchhh---HH---HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH
Q 003636 359 ----TEHTHILRVPFRSEKGILRQWISRFDVWPY---LE---TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK 428 (806)
Q Consensus 359 ----~~~v~Ilrvp~~~~~~~~~~~isr~~i~~y---l~---~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~ 428 (806)
.+|+.++.+...... .+..|..++.| .+ .|...++..+. ..+.+|||||+|.|.+++++.++.+.
T Consensus 557 ~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~-~~~~~PDIIH~HDW~TaLV~pll~~~ 631 (977)
T PLN02939 557 WTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFKRFSYFSRAALELLY-QSGKKPDIIHCHDWQTAFVAPLYWDL 631 (977)
T ss_pred EEEEECCeeEEEEecCCch----hccCCCCCCCCccHHHHHHHHHHHHHHHHH-hcCCCCCEEEECCccHHHHHHHHHHH
Confidence 023344433210000 02223333322 11 23334444443 33679999999999999876554432
Q ss_pred ------cCCcEEEEecCCCcccCCC-Chh-----hHhhhh--hhh--hchhhhhHHHHHhhhCCEEEecCHHHHhhcccc
Q 003636 429 ------MGITQCTIAHALEKTKYPD-SDI-----YWKKFD--EKY--HFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 492 (806)
Q Consensus 429 ------lgvp~v~t~H~l~~~k~~~-s~~-----~~~~l~--~~y--~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~ 492 (806)
.++|.|+|+|++....... ..+ .+..+. ... .+..++..-+..+..||.|+|+|+..+.....
T Consensus 632 y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t- 710 (977)
T PLN02939 632 YAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS- 710 (977)
T ss_pred HhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH-
Confidence 3578999999986444211 111 111110 000 01112222334566799999999987764322
Q ss_pred cccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCC-CC
Q 003636 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSD-RS 571 (806)
Q Consensus 493 v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~-~~ 571 (806)
.+ +..|.++ +.....|+.+|+||||.+.|.|..+..-....-...++.+..++...++++|+..+ ++
T Consensus 711 --e~----G~GL~~~------L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d 778 (977)
T PLN02939 711 --EG----GRGLQDT------LKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADAS 778 (977)
T ss_pred --Hh----ccchHHH------hccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCccccc
Confidence 01 1112221 22336799999999999999987642110000011233334445566778998432 46
Q ss_pred CCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003636 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (806)
Q Consensus 572 k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~ 651 (806)
.|+|+++||+.++||++.+++|+.++.+ ++++|+|+|+|+.+ .+.+.+.++++++++.++|.|+|
T Consensus 779 ~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGdGp~~---------~~e~eL~~La~~l~l~drV~FlG---- 843 (977)
T PLN02939 779 QPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGSSPVP---------HIQREFEGIADQFQSNNNIRLIL---- 843 (977)
T ss_pred ceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeCCCcH---------HHHHHHHHHHHHcCCCCeEEEEe----
Confidence 7999999999999999999999998865 47999999999751 23567888999999999999999
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccccccc---------CCcEEEECCCCHHHHH
Q 003636 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---------GASGFHIDPYHPDQAA 722 (806)
Q Consensus 652 ~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d---------g~~G~li~p~d~e~la 722 (806)
..+......+|+ ++|+||+||++|+||++++|||+||+|+|++++||..|+|.+ +.+|++++++|+++++
T Consensus 844 ~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa 922 (977)
T PLN02939 844 KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLN 922 (977)
T ss_pred ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHH
Confidence 455556678888 599999999999999999999999999999999999999975 5799999999999999
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 723 ~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
++|.+++..+..||+.|++|+++++ .++|||+.++++|+++|...
T Consensus 923 ~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 923 SALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHH
Confidence 9999888766779999999998775 37899999999999998754
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=8.1e-43 Score=392.17 Aligned_cols=399 Identities=22% Similarity=0.322 Sum_probs=296.1
Q ss_pred EEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCC
Q 003636 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360 (806)
Q Consensus 281 Ivivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~ 360 (806)
|++++.|..|.. +++..+.||.++|+. +|+++|.++||+|+ |+|.......+. . .....
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~---~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP----V---VEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC----c---cccCC
Confidence 578888887643 345556799999999 77777899999999 999764322111 1 11123
Q ss_pred ceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003636 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (806)
Q Consensus 361 ~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l 440 (806)
++++.+++..+..+ .....+..++..|.....+.+......+||+||+|.+.+++.+.++++..++|+|+|.|+.
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 67888887654321 1111122222334334443333333458999999998888888888888999999999986
Q ss_pred CcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCc
Q 003636 441 EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPK 520 (806)
Q Consensus 441 ~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k 520 (806)
...+. .++..... .........+...++.+|.|+++|+...+... ...|.+ ..|
T Consensus 135 ~~~~~----~~~~~~~~-~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~-------------------~~~~~~--~~k 188 (405)
T TIGR03449 135 AAVKN----AALADGDT-PEPEARRIGEQQLVDNADRLIANTDEEARDLV-------------------RHYDAD--PDR 188 (405)
T ss_pred HHHHH----HhccCCCC-CchHHHHHHHHHHHHhcCeEEECCHHHHHHHH-------------------HHcCCC--hhh
Confidence 43210 00000000 00001122355678999999999987655211 111332 678
Q ss_pred EEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhcc
Q 003636 521 FNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600 (806)
Q Consensus 521 ~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~ 600 (806)
+.+||||+|.+.|.|......+ .++|+ ++++++|+++||+.+.||++.++++++++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATER-------------------ARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHHH-------------------HhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 9999999999988765432211 33555 56788999999999999999999999999777
Q ss_pred CCC--eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 003636 601 REL--VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (806)
Q Consensus 601 ~~~--v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~f 678 (806)
.++ ++|+|+|++..+ ...+.++++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 776 999999975320 0123467888899999999999999 6778999999995 9999999999999
Q ss_pred cHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003636 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 758 (806)
Q Consensus 679 GltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 758 (806)
|++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999997765 79999999999999987 7899999
Q ss_pred HHHHHHHHHHH
Q 003636 759 YSERLMTLAGV 769 (806)
Q Consensus 759 ~a~~ll~ly~~ 769 (806)
++++++++|..
T Consensus 391 ~~~~~~~~y~~ 401 (405)
T TIGR03449 391 TADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=2e-42 Score=398.47 Aligned_cols=435 Identities=18% Similarity=0.215 Sum_probs=296.5
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccc-----cc
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ-----RL 353 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~-----~~ 353 (806)
|||++||...+|- -.+||+..++- .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998753 35899999999 66667799999999 9998876432210000 00
Q ss_pred e--------e----ecCCCceEEEEecCCCcc---c-ccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC
Q 003636 354 E--------R----VSGTEHTHILRVPFRSEK---G-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD 417 (806)
Q Consensus 354 e--------~----i~g~~~v~Ilrvp~~~~~---~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~ 417 (806)
+ . ....+++.++++.....- + +... ...+.......|...+...+.. .+.+|||||+|+|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~r~~~~y~~--~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw~ 138 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDRPGGIYGD--DYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDWH 138 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHHcCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCcH
Confidence 0 0 011134666665432100 0 0000 0011111122344455554443 46799999999999
Q ss_pred chHHHHHHHHHcC---CcEEEEecCCCcccC-CCChhhH-----hhhh-hhhhchhhhhHHHHHhhhCCEEEecCHHHHh
Q 003636 418 GNLVASLLAYKMG---ITQCTIAHALEKTKY-PDSDIYW-----KKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (806)
Q Consensus 418 ~~lva~lla~~lg---vp~v~t~H~l~~~k~-~~s~~~~-----~~l~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (806)
+++++.+++...+ +|.|+|+|++..... +.....+ ..+. ..+.+...+...+.+++.||.|+|+|+..++
T Consensus 139 ~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ 218 (473)
T TIGR02095 139 TALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAR 218 (473)
T ss_pred HHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHH
Confidence 9999998888876 999999999864322 1111111 0000 0011111233456689999999999998665
Q ss_pred hcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCC
Q 003636 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTL 567 (806)
Q Consensus 488 ~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l 567 (806)
.+... .+ ++.+.+.+ .....|+.+|+||+|.+.|.|..+.......-....+....++...++++|+.
T Consensus 219 ei~~~--~~----~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 219 EILTP--EF----GYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLP 286 (473)
T ss_pred HhcCC--cC----CccchhHH------HhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCC
Confidence 32211 00 11111111 11257999999999999998864321000000000011111223345678885
Q ss_pred CCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003636 568 SDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (806)
Q Consensus 568 ~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG 647 (806)
.++++++|+++||+.++||++.+++|+.++.+. +++|+|+|+|.. .+.+++++++.+++ +++.+.+
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~v~~~~ 352 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GNVRVII 352 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--CcEEEEE
Confidence 445889999999999999999999999998763 599999999853 23456777777664 5788877
Q ss_pred cccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccC------CcEEEECCCCHHHH
Q 003636 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQA 721 (806)
Q Consensus 648 ~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg------~~G~li~p~d~e~l 721 (806)
..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++ .+|++++++|++++
T Consensus 353 ----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~l 427 (473)
T TIGR02095 353 ----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427 (473)
T ss_pred ----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHH
Confidence 456677788888 5999999999999999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 722 AELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 722 a~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
+++|.+++....+|++.|++|+++++ .++|||+.++++|+++|+.
T Consensus 428 a~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 428 LAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHHHHHHHHHHHh
Confidence 99998887555559999999999886 3689999999999999974
No 11
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.4e-41 Score=391.97 Aligned_cols=439 Identities=17% Similarity=0.182 Sum_probs=299.1
Q ss_pred CCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCc--ccc--
Q 003636 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--CNQ-- 351 (806)
Q Consensus 276 p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~--~~~-- 351 (806)
|| |||++||....|- ..|||..-++- .|.++|+++||+|. |+++.+....... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 9999999988864 67999988888 66677799999999 9998876543210 000
Q ss_pred cceee--cCCCceEEEEe--cCCCccc---c-c--ccccccCCch-------hh---HH---HHHHHHHHHHHHHcCCCc
Q 003636 352 RLERV--SGTEHTHILRV--PFRSEKG---I-L--RQWISRFDVW-------PY---LE---TFTEDVGSEITAELQGFP 408 (806)
Q Consensus 352 ~~e~i--~g~~~v~Ilrv--p~~~~~~---~-~--~~~isr~~i~-------~y---l~---~f~~~~~~~i~~~~~~kP 408 (806)
....+ .-.....+.++ ...+..+ + + ..+..|..++ +| .+ .|...+.+.+. ....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~-~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQ-RLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 00010 00001122221 0000001 0 0 1112222222 11 12 33334444443 335689
Q ss_pred eEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCCcccCCCChhh-----HhhhhhhhhchhhhhHHHHHhhhCC
Q 003636 409 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDSDIY-----WKKFDEKYHFSCQFTADLIAMNNAD 476 (806)
Q Consensus 409 DlIh~h~~~~~lva~lla~~l-------gvp~v~t~H~l~~~k~~~s~~~-----~~~l~~~y~~~~~~~~e~~a~~~AD 476 (806)
||||+|+|.+++++.+++++. ++|.|+|+|++........... +........+...+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999998887765 7999999999765332111100 0000000011112334566899999
Q ss_pred EEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccC
Q 003636 477 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 556 (806)
Q Consensus 477 ~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~ 556 (806)
.|+|+|+..++.+.+.. ...+.++++.+. ...|+.+|+||||.+.|.|.++...+...-.+.++.+..+
T Consensus 223 ~VitVS~~~a~ei~~~~-----~~~~gl~~~l~~------~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~ 291 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDG-----EEAFGLDKVLEE------RKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLEN 291 (489)
T ss_pred cceeeCHHHHHHhCcCC-----CCCcChHHHHHh------cCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHH
Confidence 99999998776432210 111233322221 1578999999999999998654221100000111112222
Q ss_pred ccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH
Q 003636 557 PEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 636 (806)
Q Consensus 557 ~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~ 636 (806)
+...++.+|+..++++++|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.+++++++
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~ 359 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAEE 359 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHHH
Confidence 3345567888666788999999999999999999999999875 4799999999864 235678888887
Q ss_pred cCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccccccc----CCcEEE
Q 003636 637 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH----GASGFH 712 (806)
Q Consensus 637 ~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d----g~~G~l 712 (806)
+ +++|.|+| .++.+++..+++ ++|+||+||.+|+||++++|||+||+|+|++++||..|++.+ +.+|++
T Consensus 360 ~--~~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l 432 (489)
T PRK14098 360 H--PEQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFI 432 (489)
T ss_pred C--CCCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeE
Confidence 7 47899999 567788899999 599999999999999999999999999999999999998864 789999
Q ss_pred ECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 713 i~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
++++|+++++++|.+++. +..|++.|++++++++ .++|||+..+++|+++|+.
T Consensus 433 ~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 433 FHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred eCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 999999999999988763 5578999999988774 4789999999999999974
No 12
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.5e-41 Score=408.93 Aligned_cols=406 Identities=15% Similarity=0.093 Sum_probs=283.7
Q ss_pred cceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccc-ccc-ee
Q 003636 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRL-ER 355 (806)
Q Consensus 278 ~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~-~~~-e~ 355 (806)
+|||++||.+..|- ..+||+..+|. .|+++|+++||+|. |+|+.++........ ... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 59999999998864 45899999999 66677799999999 999987642110000 000 00
Q ss_pred ec-----------CCCceEEEEecCCCcccccccccccCCchhh------HHHHHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003636 356 VS-----------GTEHTHILRVPFRSEKGILRQWISRFDVWPY------LETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (806)
Q Consensus 356 i~-----------g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~y------l~~f~~~~~~~i~~~~~~kPDlIh~h~~~~ 418 (806)
+. ..+++.++.+.... + +..+..++.| +..|...++..+. ....+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~-~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLL-QSGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHH-hcCCCCCEEEECCChH
Confidence 00 01234444443211 1 1222222222 2234444554443 3367999999999999
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccc
Q 003636 419 NLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 492 (806)
Q Consensus 419 ~lva~lla~~l------gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~ 492 (806)
++++.+++..+ ++|+|+|+|++.... ++ ....+..||.|+|+|+..+..+..
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~- 778 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSG- 778 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHh-
Confidence 99988887643 589999999864211 00 123678999999999987653211
Q ss_pred cccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcc-hhhhccCccccccccCCCCCCC
Q 003636 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS-IEQLLFDPEQNDEHVGTLSDRS 571 (806)
Q Consensus 493 v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~-i~~~l~~~~~~~~~~g~l~~~~ 571 (806)
. .++.....|+.+|+||||.+.|.|.++.......-... .+.+...+...++.+|+. +++
T Consensus 779 --~----------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 779 --N----------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred --c----------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 0 12222257999999999999998864321000000000 001111222345678883 247
Q ss_pred CCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEcccc
Q 003636 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWIAAQ 649 (806)
Q Consensus 572 k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l--~~~V~flG~~ 649 (806)
.|+|+++|||.++||++.|++|+.++.+ ++++|+|+|+|++ + .+.+.+.++++++++ +++|.|.|.
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd------~---~~e~~l~~La~~Lg~~~~~rV~f~g~- 907 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPD------P---RIQNDFVNLANQLHSSHHDRARLCLT- 907 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCC------H---HHHHHHHHHHHHhCccCCCeEEEEec-
Confidence 8999999999999999999999999865 4799999999976 1 235678888998865 678999883
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccC-------------CcEEEECCC
Q 003636 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG-------------ASGFHIDPY 716 (806)
Q Consensus 650 ~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg-------------~~G~li~p~ 716 (806)
.+......+|+ ++|+||+||++|+||++++|||+||+|+|++++||++|+|.|+ .+||++++.
T Consensus 908 ---~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~ 983 (1036)
T PLN02316 908 ---YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA 983 (1036)
T ss_pred ---CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCC
Confidence 33333346777 5999999999999999999999999999999999999999884 699999999
Q ss_pred CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 717 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 717 d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
|+++++.+|.+++... ++....+++.+++.+.++|||+.++++|+++|+.
T Consensus 984 d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 984 DAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred CHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999999998877422 3344556777777778899999999999999974
No 13
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=4.8e-41 Score=373.75 Aligned_cols=397 Identities=32% Similarity=0.544 Sum_probs=301.7
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||+|++.|+.|.. .-|.|+.||.++++. +|++.|+++||+|+ |+|...+..... . ....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~----~---~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP----I---VELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC----c---cccc
Confidence 5889998876531 235589999999999 66667799999999 888654322111 0 1112
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (806)
.++.+++++..+.. ..++..+++++..|...+.+.+... ..+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 35778887764432 1233345667666777676666543 23899999999888888888999999999999998
Q ss_pred CCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCC
Q 003636 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (806)
Q Consensus 440 l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~ 519 (806)
+...........|. +........+...++.||.|+++|.......... .+. ...
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~--~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL-------------------YGA--YPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH-------------------ccc--ccc
Confidence 76543222111111 1112223456778999999999998765421110 111 145
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhc
Q 003636 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (806)
Q Consensus 520 k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~ 599 (806)
++.+||||+|.+.|.+........ +..+. .+++++|+|+||+++.||++.+++++.++.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEARR------------------ARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhHH------------------Hhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 699999999998887654322110 11232 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 003636 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (806)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fG 679 (806)
..++++|+|+|++..... ......++.+++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDIL------AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcch------hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 788999999999876211 112334777888899999999999 6778999999995 99999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003636 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 759 (806)
Q Consensus 680 ltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~ 759 (806)
++++|||+||+|||+++.||..|+++++.+|++++++|+++++++|.+++ +|++.+++|+++|+++++++|||+.+
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999997655 79999999999999999999999999
Q ss_pred HHHHH
Q 003636 760 SERLM 764 (806)
Q Consensus 760 a~~ll 764 (806)
+++++
T Consensus 393 ~~~~~ 397 (398)
T cd03800 393 AARLL 397 (398)
T ss_pred HHHHh
Confidence 99886
No 14
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=3e-40 Score=373.06 Aligned_cols=397 Identities=12% Similarity=0.119 Sum_probs=284.8
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccC--CCCC-CCccccccee
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI--PDAK-GTTCNQRLER 355 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~--~~~~-g~~~~~~~e~ 355 (806)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+.. |... ..........
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998876 56789999988 77777899999999 999752 2110 0000101111
Q ss_pred ecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcE
Q 003636 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQ 433 (806)
Q Consensus 356 i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~--~lva~lla~~lgvp~ 433 (806)
.....+++++|+|...... ...+. .+..+ ..|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLHL-GSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHHH-HHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123468999988643210 00010 11111 12333333333332236899999998653 456778888899999
Q ss_pred EEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeecc
Q 003636 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (806)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~G 513 (806)
++++|+.+............. ...++. ...+..+++.||.|+++|....+..+ ..|
T Consensus 135 v~~~~d~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~--------------------~~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGLLKGG--KVARLA--TAFERSLLRRFDNVSTISRSMMNKAR--------------------EKG 190 (412)
T ss_pred EEEeccCCHHHHHHhCCccCc--HHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHH--------------------HcC
Confidence 999998643210000000000 000111 12467789999999999998765211 123
Q ss_pred CCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHH
Q 003636 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (806)
Q Consensus 514 i~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea 593 (806)
++ ..++.+||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 6789999999999988765321100 01233565 5677899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECC
Q 003636 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (806)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS 673 (806)
++++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999976 56788889999986 799999 6678899999995 99999999
Q ss_pred CCCC----CcHHHHHHHHcCCCEEEcCCcC--cccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003636 674 FYEA----FGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (806)
Q Consensus 674 ~~E~----fGltvlEAMa~GlPVVAt~~GG--~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar 747 (806)
..|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|+++++++|.+++ +|++.+++|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 9998 5777899999999999998876 468886 5999999999999999996654 79999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHHh
Q 003636 748 KRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 748 ~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
++++++|||+.++++++++|+..
T Consensus 386 ~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 386 EYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHH
Confidence 99999999999999999998743
No 15
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2.3e-40 Score=381.56 Aligned_cols=437 Identities=15% Similarity=0.173 Sum_probs=285.6
Q ss_pred cceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccc-ccceee
Q 003636 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRLERV 356 (806)
Q Consensus 278 ~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~-~~~e~i 356 (806)
.|||++||....|- ..|||..-++- .|.++|+++||+|. |+++.+......... .....+
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~~~~~~~~~~~ 63 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAGIEDAEQVHSF 63 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhhhcCceEEEEE
Confidence 48999999988754 57999988888 66777899999999 999887654211000 001111
Q ss_pred cCC-C-ceEEEEecCCCccc--cc--ccccccCC-ch------hh---HHH---HHHHHHHHHHHH-cCCCceEEEEcCC
Q 003636 357 SGT-E-HTHILRVPFRSEKG--IL--RQWISRFD-VW------PY---LET---FTEDVGSEITAE-LQGFPDFIIGNYS 416 (806)
Q Consensus 357 ~g~-~-~v~Ilrvp~~~~~~--~~--~~~isr~~-i~------~y---l~~---f~~~~~~~i~~~-~~~kPDlIh~h~~ 416 (806)
... . .+++....... -. ++ ..+..|.. ++ +| .++ |...++..+... .+.+|||||+|+|
T Consensus 64 ~~~~~~~~~~~~~~~~~-v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw 142 (485)
T PRK14099 64 PDLFGGPARLLAARAGG-LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDW 142 (485)
T ss_pred eeeCCceEEEEEEEeCC-ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCc
Confidence 100 0 11222211100 00 00 11112211 11 11 222 333333322221 2469999999999
Q ss_pred CchHHHHHHHH--HcCCcEEEEecCCCcccCCCCh------hhHhhhh-hhhhchhhhhHHHHHhhhCCEEEecCHHHHh
Q 003636 417 DGNLVASLLAY--KMGITQCTIAHALEKTKYPDSD------IYWKKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (806)
Q Consensus 417 ~~~lva~lla~--~lgvp~v~t~H~l~~~k~~~s~------~~~~~l~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (806)
.+++++.++.. ..++|.|+|+|++......... ..+..+. ....+.......+.++..||.|+|+|+..++
T Consensus 143 ~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~ 222 (485)
T PRK14099 143 QAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYAL 222 (485)
T ss_pred HHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHH
Confidence 99988877754 2468999999998543321111 0111000 0001111112356678999999999988765
Q ss_pred hcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCC
Q 003636 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTL 567 (806)
Q Consensus 488 ~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l 567 (806)
...+. + ..+.+.+.+ .....|+.+|+||||.+.|.|.++...........++.+..++...++++|+.
T Consensus 223 ei~~~---~---~g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 290 (485)
T PRK14099 223 EIQGP---E---AGMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLD 290 (485)
T ss_pred HHhcc---c---CCcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCC
Confidence 32211 0 001111111 11257899999999999998865421100000000111111223345668885
Q ss_pred CCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-EEc
Q 003636 568 SDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF-RWI 646 (806)
Q Consensus 568 ~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V-~fl 646 (806)
.+++.++|+++||+.++||++.|++|+.++.+ .+++|+|+|+|.. ...+.+++++++++ +++ .|+
T Consensus 291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~--~~v~~~~ 356 (485)
T PRK14099 291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP--GQIGVVI 356 (485)
T ss_pred cccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--CCEEEEe
Confidence 44578899999999999999999999999865 3799999999854 23456777887764 455 788
Q ss_pred ccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccC---------CcEEEECCCC
Q 003636 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHIDPYH 717 (806)
Q Consensus 647 G~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg---------~~G~li~p~d 717 (806)
|+ .+++..+|..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|
T Consensus 357 G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d 430 (485)
T PRK14099 357 GY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT 430 (485)
T ss_pred CC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC
Confidence 83 46888887535999999999999999999999999999999999999999876 6899999999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 718 ~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
+++++++|.+++. +.+|++.|++|+++|+ .++|||+.++++|+++|+..
T Consensus 431 ~~~La~ai~~a~~-l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 431 ADALAAALRKTAA-LFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred HHHHHHHHHHHHH-HhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHH
Confidence 9999999987543 4589999999999986 37899999999999998754
No 16
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1.6e-40 Score=373.89 Aligned_cols=365 Identities=16% Similarity=0.186 Sum_probs=273.5
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||+++++..+ |..||.+.++. +|++.|+++||+|. |+|...++..+. + ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~--~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------R--YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------c--ccc
Confidence 6899998776 56799999999 77777899999999 998764322111 0 112
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEe
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 437 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~--lva~lla~~lgvp~v~t~ 437 (806)
.++.+.++|...... .........+...+.+.+. ..+|||||+|++.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~--------~~~~~~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN--------QSTLPTFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC--------CccccchhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888887653211 0011111112222333333 348999999987653 346777888999999999
Q ss_pred cCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCC
Q 003636 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (806)
Q Consensus 438 H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~ 517 (806)
|+..... +.... . .. ......++++|.|+++|....+. .....+++
T Consensus 121 h~~~~~~----~~~~~-~---~~-----~~~~~~~~~~d~ii~~s~~~~~~-------------------~~~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSI-H---TN-----KLLRFSLADVDHVICVSHTSKEN-------------------TVLRASLD-- 166 (398)
T ss_pred ccccccc----chhhH-H---hh-----HHHHHhhccCCEEEEecHhHhhH-------------------HHHHhCCC--
Confidence 9854211 10000 0 00 11344678999999999875431 00112333
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHh
Q 003636 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (806)
Q Consensus 518 ~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l 597 (806)
..|+.+||||+|.+.|.|.... .++++++|+++||+.+.||++.|+++++++
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 6789999999999887664321 035778999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCC
Q 003636 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (806)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~ 677 (806)
.+..++++|+|+|+|+. .+.+.++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88889999999999876 566888999999999999999 6678899999995 999999999999
Q ss_pred CcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003636 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (806)
Q Consensus 678 fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 757 (806)
||++++|||+||+|||+|+.||..|++.++. ++++ +.|+++++++|.+++ +++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~-~~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLA-EPDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeec-CCCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998764 4444 448999999998766 566556678899999999999999
Q ss_pred HHHHHHHHHHHH
Q 003636 758 IYSERLMTLAGV 769 (806)
Q Consensus 758 ~~a~~ll~ly~~ 769 (806)
.++++++++|+.
T Consensus 356 ~~~~~~~~~y~~ 367 (398)
T cd03796 356 DVAKRTEKVYDR 367 (398)
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 17
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1.6e-40 Score=382.21 Aligned_cols=434 Identities=18% Similarity=0.162 Sum_probs=294.9
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccc--cce---
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLE--- 354 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~--~~e--- 354 (806)
||++||+..+|- ..+||...++- .|+++|++.||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999987753 36899999999 66667799999999 9998876532210000 000
Q ss_pred ------------eecCCCceEEEEecCCCccc--ccc--cccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003636 355 ------------RVSGTEHTHILRVPFRSEKG--ILR--QWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (806)
Q Consensus 355 ------------~i~g~~~v~Ilrvp~~~~~~--~~~--~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~ 418 (806)
......++.+++++...... ... .+....+.......|...+...+.. +..+|||||+|.|.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~~t 140 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDWHT 140 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECchHH
Confidence 00011356666664432111 000 0000000011112344445544443 367999999999999
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCCcccCCCChhhHh--------hhhhhhhchhhhhHHHHHhhhCCEEEecCHH
Q 003636 419 NLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWK--------KFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (806)
Q Consensus 419 ~lva~lla~~l------gvp~v~t~H~l~~~k~~~s~~~~~--------~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 484 (806)
++++.+++... ++|+|+|+|++............. .....+.+...+..++.++..||.|+++|..
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 88888887764 899999999986543211110000 0001112233445678899999999999987
Q ss_pred HHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccccc
Q 003636 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (806)
Q Consensus 485 ~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (806)
.++.+.+.. + ++.+.++ +.....|+.+|+||+|.+.|.|..+............+....++...++++
T Consensus 221 ~~~~i~~~~--~----~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 288 (476)
T cd03791 221 YAREILTPE--F----GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEEL 288 (476)
T ss_pred HHHHhCCCC--C----CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHc
Confidence 665322110 0 0011100 111257999999999999998865432110000011111222333455677
Q ss_pred CCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003636 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (806)
Q Consensus 565 g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~ 644 (806)
|+..++++++|+++||+.+.||++.+++++.++.+. +++|+|+|+|.. ...+.+.++++++ .+++.
T Consensus 289 g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~v~ 354 (476)
T cd03791 289 GLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGRVA 354 (476)
T ss_pred CCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCcEE
Confidence 875557899999999999999999999999998764 499999999854 2345677777765 56788
Q ss_pred EcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCC------cEEEECCCCH
Q 003636 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA------SGFHIDPYHP 718 (806)
Q Consensus 645 flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~------~G~li~p~d~ 718 (806)
+.+ ..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++. +|++++|+|+
T Consensus 355 ~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~ 429 (476)
T cd03791 355 VLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNA 429 (476)
T ss_pred EEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCH
Confidence 766 345566677788 59999999999999999999999999999999999999999988 9999999999
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 719 e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
++++++|.++++ +..+++.|+++++++++ +.|||+.++++|+++|+
T Consensus 430 ~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 430 DALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 999999988764 34578999999988864 57999999999999985
No 18
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=6.1e-39 Score=357.52 Aligned_cols=378 Identities=22% Similarity=0.308 Sum_probs=273.1
Q ss_pred ceEEEEcccccCccccccCCCC-cccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeec
Q 003636 279 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~-tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~ 357 (806)
|||++++..++ |+ .||.++++. +|+++|+++ ++|+ |+|.... . .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~---------~----~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQ---------R----F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCc---------h----h
Confidence 79999988765 44 499999999 556666766 6777 6654311 0 0
Q ss_pred CCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003636 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (806)
Q Consensus 358 g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~ 437 (806)
...++.+.+++..... ......+..+..++. ......+||+||+|.+.+++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1234677666543210 011112222222221 1111347999999998887777777778899999999
Q ss_pred cCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCC
Q 003636 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (806)
Q Consensus 438 H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~ 517 (806)
|++......... .....+.+.. ..++..++.+|.|+++|....+...+ ...|++
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~------------------~~~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILK------------------YYPDLD-- 167 (388)
T ss_pred eccccccccccc----ccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHH------------------HcCCCC--
Confidence 987542210000 0011111111 24667899999999999886552111 011333
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHh
Q 003636 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (806)
Q Consensus 518 ~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l 597 (806)
..++.+||||+|.+.|.|......+ .++|+ ++++++|+|+||+.+.||++.|+++++++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVVL-------------------DRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHHH-------------------HHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 6789999999999988775432211 23555 56788999999999999999999999988
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCC
Q 003636 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (806)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l-~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E 676 (806)
. ++++++++|+|++. .+..+.+++.+.+++. .++|.|++ +.++.+++..+++. +|++|+||.+|
T Consensus 227 ~---~~~~l~i~g~g~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e 291 (388)
T TIGR02149 227 P---KDVQVVLCAGAPDT--------PEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYE 291 (388)
T ss_pred h---hcCcEEEEeCCCCc--------HHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccC
Confidence 5 47899999988651 1234556677777665 34577765 25778999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCH------HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003636 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP------DQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (806)
Q Consensus 677 ~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~------e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v 750 (806)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.++ ++|++.+++|+++|++.+
T Consensus 292 ~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l----~~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINIL----LADPELAKKMGIAGRKRA 367 (388)
T ss_pred CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHH----HhCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988 7888888654 489999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHHH
Q 003636 751 YERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 751 ~~~ysw~~~a~~ll~ly~~ 769 (806)
.++|||+.+++++.++|+.
T Consensus 368 ~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 368 EEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHhCCHHHHHHHHHHHHHh
Confidence 9999999999999999874
No 19
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=5.3e-39 Score=369.33 Aligned_cols=379 Identities=16% Similarity=0.225 Sum_probs=267.6
Q ss_pred CCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccccee
Q 003636 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 355 (806)
Q Consensus 276 p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~ 355 (806)
-++|||+++.. ..| .+..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~~-~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFVE-PSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEEC-CcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 34689999963 221 145799999999 67777799999999 888653210 00
Q ss_pred ecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEE
Q 003636 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQC 434 (806)
Q Consensus 356 i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~-~lva~lla~~lgvp~v 434 (806)
. .++.+++++..+. +. ..... +.+ .+...+.+.+. +.+||+||+|.+.. .+.+.++++..++|+|
T Consensus 107 ~---~g~~v~~~~~~~~-~~----~~~~~-~~~--~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 F---HGAKVIGSWSFPC-PF----YQKVP-LSL--ALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred c---cCceeeccCCcCC-cc----CCCce-eec--cCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 1 1334443322111 00 00000 000 01112333333 34899999998654 4455667788999999
Q ss_pred EEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccC
Q 003636 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (806)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi 514 (806)
++.|+......+... +..+... . ...++..++.+|.|+++|....+...+ .|.
T Consensus 173 ~~~h~~~~~~~~~~~--~~~~~~~---~--~~~~r~~~~~ad~ii~~S~~~~~~l~~--------------------~~~ 225 (465)
T PLN02871 173 MSYHTHVPVYIPRYT--FSWLVKP---M--WDIIRFLHRAADLTLVTSPALGKELEA--------------------AGV 225 (465)
T ss_pred EEEecCchhhhhccc--chhhHHH---H--HHHHHHHHhhCCEEEECCHHHHHHHHH--------------------cCC
Confidence 999986432211111 1111000 0 122456788999999999886652111 111
Q ss_pred CCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHH
Q 003636 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (806)
Q Consensus 515 ~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~ 594 (806)
....|+.+||||+|.+.|.|........ ..+.. ..+++++|+|+||+.+.||++.+++++
T Consensus 226 -~~~~kv~vi~nGvd~~~f~p~~~~~~~~------------------~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 226 -TAANRIRVWNKGVDSESFHPRFRSEEMR------------------ARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred -CCcCeEEEeCCccCccccCCccccHHHH------------------HHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 1156899999999999998754322111 11111 034678999999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC
Q 003636 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (806)
Q Consensus 595 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~ 674 (806)
+++ ++++|+|+|+|+. .+.++++++. .+|.|+| .++.+++..+|+. +|+||+||.
T Consensus 286 ~~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~ 340 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSE 340 (465)
T ss_pred HhC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCc
Confidence 876 4799999999876 4556666653 3699999 6677899999995 999999999
Q ss_pred CCCCcHHHHHHHHcCCCEEEcCCcCccccccc---CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003636 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (806)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d---g~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 751 (806)
.|+||++++|||+||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.+++ +|++.+++|+++|++++
T Consensus 341 ~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~- 415 (465)
T PLN02871 341 SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV- 415 (465)
T ss_pred ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999 99999999999999999996655 79999999999999998
Q ss_pred HhCCHHHHHHHHHH-HHHHh-chhh
Q 003636 752 ERYTWKIYSERLMT-LAGVY-GFWK 774 (806)
Q Consensus 752 ~~ysw~~~a~~ll~-ly~~~-~~~~ 774 (806)
++|||+.+++++++ +|+.. -+|+
T Consensus 416 ~~fsw~~~a~~l~~~~Y~~~~~~~~ 440 (465)
T PLN02871 416 EKWDWRAATRKLRNEQYSAAIWFWR 440 (465)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999998 68644 3443
No 20
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=7.4e-39 Score=362.03 Aligned_cols=281 Identities=17% Similarity=0.240 Sum_probs=231.2
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--HcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecC
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~--~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S 482 (806)
+.+||+||+|++..+..+..++. ..+.|.++|+|+...... .....+.. .....++++|.|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~--------~~~~~~~~-----~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSR--------EVLNHYTP-----EYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccc--------hhhhhhhH-----HHHHHHHhCCEEEECC
Confidence 55899999999887777777765 345577889997532110 00011110 1234678999999999
Q ss_pred HHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccc
Q 003636 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (806)
Q Consensus 483 ~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (806)
+...+.+. ..|++ ..|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l~--------------------~~g~~--~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRLQ--------------------KMGCP--PEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHHH--------------------HcCCC--HHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 87655211 12343 67999999999998886532110
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~ 642 (806)
..++..|+++||+.+.||++.+++|++++++..++++|+|+|+|+. .++++++++++++.++
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2345679999999999999999999999988888999999999976 5779999999999999
Q ss_pred EEEcccccCcCChHHHHHHHHccCcEEEECCCC------CCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCC
Q 003636 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716 (806)
Q Consensus 643 V~flG~~~~~~~~~el~~~la~aaDifV~PS~~------E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~ 716 (806)
|.|+| .++.+++..+++. +|+||+||.. |+||++++|||+||+|||+|+.||..|+|.++.+|++++|+
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 6678899999995 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 717 HPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 717 d~e~la~aI~~~l~~l~~-dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
|+++++++|.+++ + ||+.+++|+++|++++.++|||+.+++++.++|+.
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999997654 6 99999999999999999999999999999999864
No 21
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.3e-38 Score=349.64 Aligned_cols=366 Identities=19% Similarity=0.287 Sum_probs=267.6
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecC
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g 358 (806)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+... . ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~-------~---~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRL-------D---EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcch-------h---hh
Confidence 68999963 34599999999 67777899999999 8886532210 0 01
Q ss_pred CCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH----cCCcEE
Q 003636 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK----MGITQC 434 (806)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~----lgvp~v 434 (806)
..+..+..++.... .......+.......+.+.+. +.+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY--------PLFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc--------chhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333322110 001111122222333444443 459999999987654433344332 279999
Q ss_pred EEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccC
Q 003636 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (806)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi 514 (806)
++.|+........ ...+. ...+..++.+|.|+++|....+...+. +
T Consensus 116 ~~~h~~~~~~~~~--------~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~- 161 (371)
T cd04962 116 TTLHGTDITLVGQ--------DPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------F- 161 (371)
T ss_pred EEEcCCccccccc--------cccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------c-
Confidence 9999753211100 01111 124457889999999998765521110 1
Q ss_pred CCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHH
Q 003636 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (806)
Q Consensus 515 ~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~ 594 (806)
....++.+||||+|...|.+......+ +.++. .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 125689999999999877664432211 22444 46788999999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC
Q 003636 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (806)
Q Consensus 595 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~ 674 (806)
.++.+. .+++|+|+|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 5699999999977 45678888999999999999943 368888885 999999999
Q ss_pred CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
Q 003636 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 754 (806)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~y 754 (806)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999997654 799999999999999988999
Q ss_pred CHHHHHHHHHHHHHH
Q 003636 755 TWKIYSERLMTLAGV 769 (806)
Q Consensus 755 sw~~~a~~ll~ly~~ 769 (806)
||+.+++++.++|+.
T Consensus 356 s~~~~~~~~~~~y~~ 370 (371)
T cd04962 356 DSERIVPQYEALYRR 370 (371)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999863
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=2.6e-37 Score=346.44 Aligned_cols=375 Identities=16% Similarity=0.217 Sum_probs=273.6
Q ss_pred CcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceee
Q 003636 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (806)
Q Consensus 277 ~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i 356 (806)
|+-||++++.--+|-|. ...||.++++. +++++|+. +|+ |+|...+.-. ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 67789998887776643 34699999999 66666643 899 9998755311 111
Q ss_pred cCCCceEEEEecCCCccc-ccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003636 357 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (806)
Q Consensus 357 ~g~~~v~Ilrvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~ 435 (806)
...+|+.++++++..... ...+|.+. ..+ .|...+...+......++||||+|... .+...+..+..+.|.+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 111246677776643211 11222222 222 233344444433324579999999755 34444555556789999
Q ss_pred EecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCC
Q 003636 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (806)
Q Consensus 436 t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~ 515 (806)
+.|+... ...++.++.||++|....+. + . .+.+
T Consensus 127 ~~h~~~~--------------------------~~~~~~~~~ii~~S~~~~~~-------~------------~--~~~~ 159 (380)
T PRK15484 127 HMHNAFE--------------------------PELLDKNAKIIVPSQFLKKF-------Y------------E--ERLP 159 (380)
T ss_pred EEecccC--------------------------hhHhccCCEEEEcCHHHHHH-------H------------H--hhCC
Confidence 9996421 01244678999999876541 1 1 1122
Q ss_pred CCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHH
Q 003636 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (806)
Q Consensus 516 v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~ 595 (806)
..++.+||||+|.+.|.+......+ +.+|+ ++++++|+|+||+.+.||++.|++|++
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPNLR-------------------QQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHHHH-------------------HHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 5689999999999888765432211 23555 456789999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCC
Q 003636 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (806)
Q Consensus 596 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~ 675 (806)
++.+.+|+++|+|+|+|+... +.+...+.+.+++++++++ ++|.|+| .++.+++..+|+ ++|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~~---~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~-~aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTASS---KGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYP-LADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCcccc---ccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHH-hCCEEEeCCCC
Confidence 998888999999999986521 1123345567777777765 5799999 667889999999 49999999974
Q ss_pred -CCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEE-EECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh
Q 003636 676 -EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (806)
Q Consensus 676 -E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~-li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ 753 (806)
|+||++++|||+||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.+++ +|++. .+|+++|++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 568899999999996654 78885 77999999999999
Q ss_pred CCHHHHHHHHHHHHHHh
Q 003636 754 YTWKIYSERLMTLAGVY 770 (806)
Q Consensus 754 ysw~~~a~~ll~ly~~~ 770 (806)
|||+.++++++++|..+
T Consensus 362 fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 362 YSWEGVTQRFEEQIHNW 378 (380)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998743
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=4.1e-37 Score=345.97 Aligned_cols=367 Identities=15% Similarity=0.193 Sum_probs=248.2
Q ss_pred HHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCcccccccccccCCchhhHHHHHH---
Q 003636 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTE--- 394 (806)
Q Consensus 318 eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~--- 394 (806)
+|+++|+++||+|+ ++|....... .+ ++++++++..+... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 57888899999999 9887733210 11 57888877553311 123333332211
Q ss_pred ---HHHHHHHH--HcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCC----ChhhHhhhhhhhhchhh
Q 003636 395 ---DVGSEITA--ELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPD----SDIYWKKFDEKYHFSCQ 464 (806)
Q Consensus 395 ---~~~~~i~~--~~~~kPDlIh~h~~~~~lva~lla~~-lgvp~v~t~H~l~~~k~~~----s~~~~~~l~~~y~~~~~ 464 (806)
.+.+.+.. ..+.+||+||+|...+. +..+.+. .++|+|...|.+....... ........ ...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLD-DALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchh-HHHHHHHh
Confidence 12222222 22568999999975542 2334444 3588887665322111100 00000000 00111111
Q ss_pred hhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHH
Q 003636 465 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 544 (806)
Q Consensus 465 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~ 544 (806)
.......++.+|.||++|....+..+ ..+..|+.|||||+|.+.|.|.........
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~------------------------~~~~~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFP------------------------AELRSRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCc------------------------HhhccceEEeCCCccccccCCCchhhhccc
Confidence 11234679999999999988655211 011468999999999999987643321110
Q ss_pred hhhcchhhhccCccccccccCCCCCCCCCEEEEEec-CCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHH
Q 003636 545 ALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREE 623 (806)
Q Consensus 545 ~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGR-L~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee 623 (806)
...++ .+++++|+|+|| +.+.||++.+++|++++.+..|+++|+|+|++...........
T Consensus 203 -----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~ 263 (396)
T cd03818 203 -----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDG 263 (396)
T ss_pred -----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCc
Confidence 11122 457789999998 9999999999999999988889999999998532100000000
Q ss_pred HHHHHHHH-HHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccc
Q 003636 624 IAEIEKMH-ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 702 (806)
Q Consensus 624 ~~~~~~l~-~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~E 702 (806)
..+.+.+. ++..+++ .++|.|+| .++.+++..+|+ ++|++|+||..|++|++++||||||+|||+|+.||..|
T Consensus 264 ~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~-~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e 337 (396)
T cd03818 264 ESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQ-VSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVRE 337 (396)
T ss_pred ccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHH-hCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchh
Confidence 01122222 2222222 47899999 677899999999 49999999999999999999999999999999999999
Q ss_pred ccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003636 703 IIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (806)
Q Consensus 703 iI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 765 (806)
++.++.+|++++++|+++++++|.+++ +|++.+.+|+++|++++.++|||+.++++|++
T Consensus 338 ~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 338 VITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred hcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999996655 89999999999999999999999999998863
No 24
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=5.2e-37 Score=341.19 Aligned_cols=365 Identities=16% Similarity=0.187 Sum_probs=263.1
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++|.++. +.||.+.++. +|++.|.+.|+++. |++....+ ...... . .
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~----~~~~~~---~-~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS----AFRKRI---Q-R 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC----hhHHHH---H-h
Confidence 677776553 3599999999 66666788999987 77632111 111111 1 1
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~-v~t~H 438 (806)
.++.+++++.... . .+ .+...+.+.+.+ .+|||||+|...+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~--------~---~~----~~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG--------K---DV----AVYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC--------C---Ch----HHHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2467777654321 0 11 112234444444 3899999997644 33455666778774 44555
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
+...... ....| .+. ...+.....+|.++++|....+...+ ..|++ .
T Consensus 113 ~~~~~~~--~~~~~-----~~~-----~~~~~~~~~~~~~i~vs~~~~~~~~~-------------------~~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDL--DGSNW-----KYR-----WLRRLYRPLIHHYVAVSRDLEDWLRG-------------------PVKVP--P 159 (374)
T ss_pred Ccccccc--hhhHH-----HHH-----HHHHHHHhcCCeEEEeCHHHHHHHHH-------------------hcCCC--h
Confidence 4321110 01111 111 12334556789999999876552111 11232 6
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~ 598 (806)
.++.+|+||+|.+.|.|......... +.... .+++++|+++||+.+.||++.+++++.++.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPIL-----------------PPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhh-----------------HhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 78999999999998876542211100 00111 457789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC
Q 003636 599 QLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (806)
Q Consensus 599 ~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~ 674 (806)
+..+ +++|+++|+|+. .+.+++.++++++.+++.|+|. ..++..+++ ++|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~-~adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGE------RDDVPALMQ-ALDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCC------cCCHHHHHH-hcCEEEeccc
Confidence 6544 789999999876 4678888999999999999993 346888888 4999999999
Q ss_pred CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
Q 003636 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 754 (806)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~y 754 (806)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999997654 799999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 003636 755 TWKIYSERLMTLAGV 769 (806)
Q Consensus 755 sw~~~a~~ll~ly~~ 769 (806)
||+.+++++.++|..
T Consensus 358 s~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 358 SINAMVAAYAGLYDQ 372 (374)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999974
No 25
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=6.7e-37 Score=341.58 Aligned_cols=386 Identities=20% Similarity=0.269 Sum_probs=262.6
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecC
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g 358 (806)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+.. .+. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HCF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hcc--hhccCC
Confidence 79999977643 489999999 67777799999999 998642211 000 011111
Q ss_pred CCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003636 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT--AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (806)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~--~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t 436 (806)
++.+...+....... .++. ..+..+.......+. .....+||+||+|....+..+ +....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGRF---HILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHhH---HHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 122222211100000 0110 011111111111111 122568999999876543322 223334889999
Q ss_pred ecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCC
Q 003636 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (806)
Q Consensus 437 ~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v 516 (806)
.|........... .++ ..++.. ....+..+++.||.|+++|....+...+. | ....
T Consensus 122 ~h~~~~~~~~~~~-~~~---~~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~---~---------------~~~~- 177 (392)
T cd03805 122 CHFPDQLLAQRGS-LLK---RLYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKT---F---------------PSLA- 177 (392)
T ss_pred EecChHHhcCCCc-HHH---HHHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHH---h---------------cccc-
Confidence 9942211000011 111 111110 11346778999999999998765421111 0 1111
Q ss_pred CCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHH
Q 003636 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (806)
Q Consensus 517 ~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~ 596 (806)
..++.+|+||+|.+.|.|....... +..+. .+++++|+++||+.+.||++.+++++.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999888764332100 11222 4677899999999999999999999999
Q ss_pred hhccC---CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEcccccCcCChHHHHHHHHccCcEEEEC
Q 003636 597 NSQLR---ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (806)
Q Consensus 597 l~~~~---~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~P 672 (806)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++.+++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR----VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC----CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98776 79999999998651 12334556788999999 99999999999 6778899999994 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Q 003636 673 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (806)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~ 752 (806)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++.+++|+++|++++++
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999976 8999999996654 7999999999999999999
Q ss_pred hCCHHHHHHHH
Q 003636 753 RYTWKIYSERL 763 (806)
Q Consensus 753 ~ysw~~~a~~l 763 (806)
+|||+.+++++
T Consensus 382 ~~s~~~~~~~~ 392 (392)
T cd03805 382 KFSTEAFAERL 392 (392)
T ss_pred hcCHHHHhhhC
Confidence 99999998764
No 26
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=7.8e-37 Score=337.00 Aligned_cols=281 Identities=19% Similarity=0.294 Sum_probs=231.0
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHH
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 484 (806)
..+||+||+|....+..+..++++.|+|++++.|+........... ... +. .....+...++.+|.|+++|..
T Consensus 80 ~~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~----~~~-~~--~~~~~~~~~~~~~d~ii~~s~~ 152 (367)
T cd05844 80 RHRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALLL----RSR-WA--LYARRRRRLARRAALFIAVSQF 152 (367)
T ss_pred hhCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhhc----ccc-hh--HHHHHHHHHHHhcCEEEECCHH
Confidence 3489999999877778888888999999999999753322111100 000 01 1112345678899999999988
Q ss_pred HHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccccc
Q 003636 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (806)
Q Consensus 485 ~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (806)
..+... ..|++ +.++.++|||+|.+.|.|...
T Consensus 153 ~~~~~~--------------------~~~~~--~~~i~vi~~g~d~~~~~~~~~-------------------------- 184 (367)
T cd05844 153 IRDRLL--------------------ALGFP--PEKVHVHPIGVDTAKFTPATP-------------------------- 184 (367)
T ss_pred HHHHHH--------------------HcCCC--HHHeEEecCCCCHHhcCCCCC--------------------------
Confidence 665211 11333 678999999999887765321
Q ss_pred CCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003636 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (806)
Q Consensus 565 g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~ 644 (806)
..+++.++++|++.+.||++.+++|+.++.+..++++|+|+|+|+. .++++++++++++.++|+
T Consensus 185 ----~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~ 248 (367)
T cd05844 185 ----ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVT 248 (367)
T ss_pred ----CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEE
Confidence 2456789999999999999999999999988888999999998865 567888899999999999
Q ss_pred EcccccCcCChHHHHHHHHccCcEEEECCC------CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCH
Q 003636 645 WIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (806)
Q Consensus 645 flG~~~~~~~~~el~~~la~aaDifV~PS~------~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~ 718 (806)
|+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+
T Consensus 249 ~~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~ 323 (367)
T cd05844 249 FLG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDV 323 (367)
T ss_pred ECC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCH
Confidence 999 6778999999995 999999997 59999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003636 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (806)
Q Consensus 719 e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 765 (806)
++++++|.+++ +|++.+++|+.+|++++.++|||+.+++++.+
T Consensus 324 ~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 324 AALAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 99999997655 79999999999999999999999999999875
No 27
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=326.29 Aligned_cols=365 Identities=17% Similarity=0.220 Sum_probs=280.5
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecC
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g 358 (806)
++|++||+|.| |.+||.+.++. .|++.|.+.||.|. ++|..+.+..|..+ -
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giry--------l 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRY--------L 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceee--------e
Confidence 57999999999 56899999999 88889999999998 99999877655432 2
Q ss_pred CCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEE
Q 003636 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTI 436 (806)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~--lva~lla~~lgvp~v~t 436 (806)
+.+.+++.+|+... .+....|-+....+-+...+.+ .+..+||+|.+.+. --+.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lr---E~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLR---ERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhh---hceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 33577888777542 2222233322222223333333 38999999998874 35677788899999999
Q ss_pred ecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCC
Q 003636 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (806)
Q Consensus 437 ~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v 516 (806)
-|++.... ++.-..... .+ ..++...|.+||+|+.-.+++ .....++
T Consensus 121 dHSlfGfa----d~~si~~n~----ll-----~~sL~~id~~IcVshtskent-------------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFA----DIGSILTNK----LL-----PLSLANIDRIICVSHTSKENT-------------------VLRGALA- 167 (426)
T ss_pred cccccccc----chhhhhhcc----ee-----eeeecCCCcEEEEeecCCCce-------------------EEEeccC-
Confidence 99974322 211111111 11 235778999999998744321 1123344
Q ss_pred CCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHH
Q 003636 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (806)
Q Consensus 517 ~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~ 596 (806)
+.|+.+|||.++...|.|.+... ...+...|+.++||..+||+|.|++++++
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~---------------------------~S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADK---------------------------PSADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCcccc---------------------------CCCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 78999999999999999965421 02344789999999999999999999999
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCC
Q 003636 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (806)
Q Consensus 597 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E 676 (806)
+.+++|+++++|+|+||. ...+++..+++.++++|.++| .++.+++-+.+.+ .|+|+.||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999998 556888899999999999999 7889999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003636 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 756 (806)
Q Consensus 677 ~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw 756 (806)
+||++++|||+||+|||+|++||.+|++.++ . ......+++++++++.+.+.++...|... -+++.+.|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~-i~~~~~~~~dl~~~v~~ai~~~~~~p~~~-------h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED-M-ITLGEPGPDDLVGAVEKAITKLRTLPLEF-------HDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc-c-eeccCCChHHHHHHHHHHHHHhccCchhH-------HHHHHHhccH
Confidence 9999999999999999999999999999765 2 22445579999999999988877775432 3466788999
Q ss_pred HHHHHHHHHHHHHh
Q 003636 757 KIYSERLMTLAGVY 770 (806)
Q Consensus 757 ~~~a~~ll~ly~~~ 770 (806)
+..+++.+.+|...
T Consensus 354 ~dVa~rTekvy~r~ 367 (426)
T KOG1111|consen 354 KDVAERTEKVYDRA 367 (426)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999996543
No 28
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1.5e-36 Score=345.14 Aligned_cols=398 Identities=15% Similarity=0.124 Sum_probs=269.3
Q ss_pred CCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCccc----
Q 003636 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKG---- 374 (806)
Q Consensus 299 p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~---- 374 (806)
-..||.+..+..++-++.+...+.=+-.|+.|..+|-++|+.+....|.++--..-.-.+.+...+-+++..-+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (578)
T PRK15490 171 LGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIE 250 (578)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcccc
Confidence 3469999999988776655544444446777777777999998776665442111111233334555555222111
Q ss_pred --ccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE-EecCCCcccCCCChhh
Q 003636 375 --ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDIY 451 (806)
Q Consensus 375 --~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~-t~H~l~~~k~~~s~~~ 451 (806)
.++.+++. +.|-...-...+...++ ..+|||||+|...+++.+.++++..|+|+++ +.|...... ...
T Consensus 251 ~~~~~~~~~~--~~~~~~~~~~~l~~~ir---~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~--~~r-- 321 (578)
T PRK15490 251 SPELRLLLSH--LPPVCKYGIKHLVPHLC---ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV--RKR-- 321 (578)
T ss_pred chHHHHHHhc--CChHHHHHHHHHHHHHH---HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc--hhh--
Confidence 11111111 01111111122333333 4599999999988888899999999999865 466521110 000
Q ss_pred HhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCC
Q 003636 452 WKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMD 531 (806)
Q Consensus 452 ~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~ 531 (806)
.+...+..... .......+| +++.|....+. + ....|++ +.|+.+||||+|..
T Consensus 322 --~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~-------l------------~~~lgip--~~KI~VIyNGVD~~ 374 (578)
T PRK15490 322 --LFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRH-------Y------------ADWLKLE--AKHFQVVYNGVLPP 374 (578)
T ss_pred --HHHHHHHHhhh---hceeEecch-hhhccHHHHHH-------H------------HHHhCCC--HHHEEEEeCCcchh
Confidence 01010100000 001122333 44445443221 1 1112333 78999999999999
Q ss_pred CCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeC
Q 003636 532 IYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAG 611 (806)
Q Consensus 532 ~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~ 611 (806)
.|.|........+. ....++ +++.++|+++||+.+.||...+++++.++.+..|+++|+|+|+
T Consensus 375 rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGd 437 (578)
T PRK15490 375 STEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGD 437 (578)
T ss_pred hcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeC
Confidence 88875432111000 001222 3456899999999999999999999999887789999999999
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCC
Q 003636 612 YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 691 (806)
Q Consensus 612 g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlP 691 (806)
|+. .++++++++++++.++|.|+|+ ..++..+|+ ++|+||+||.+|+||++++|||+||+|
T Consensus 438 G~~------------~eeLk~la~elgL~d~V~FlG~------~~Dv~~~La-aADVfVlPS~~EGfp~vlLEAMA~GlP 498 (578)
T PRK15490 438 GDL------------RAEAQKRAEQLGILERILFVGA------SRDVGYWLQ-KMNVFILFSRYEGLPNVLIEAQMVGVP 498 (578)
T ss_pred chh------------HHHHHHHHHHcCCCCcEEECCC------hhhHHHHHH-hCCEEEEcccccCccHHHHHHHHhCCC
Confidence 976 6678999999999999999994 346888888 599999999999999999999999999
Q ss_pred EEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 692 TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 692 VVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
||+|+.||..|+|.+|.+|++++++|++++++++..+ ..+..+.+.+..|+++|+++++++|||+.++++|+++|..
T Consensus 499 VVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 499 VISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred EEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999988876432 2334555566789999999999999999999999999863
No 29
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=5.5e-36 Score=354.32 Aligned_cols=300 Identities=14% Similarity=0.200 Sum_probs=225.1
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE-EecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHh
Q 003636 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (806)
Q Consensus 394 ~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~-t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~ 472 (806)
..+.+.+++ .+|||||+|.+.+++++.++++..++|+|+ +.|++...... . .|+ ..|... ...+..
T Consensus 390 ~~L~~~lk~---~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~---~~~~~l----~~~l~~ 456 (694)
T PRK15179 390 TKLTDVMRS---SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYR---VEYDII----YSELLK 456 (694)
T ss_pred HHHHHHHHH---cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHH---HHHHHH----HHHHHh
Confidence 344444443 489999999999988899999989999876 56765322111 1 111 111110 111222
Q ss_pred hhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhh
Q 003636 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ 552 (806)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~ 552 (806)
..++.+|++|....+. +....|++ ..|+.|||||||...|.|..........
T Consensus 457 ~~~~i~Vs~S~~~~~~-------------------l~~~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~~------- 508 (694)
T PRK15179 457 MRGVALSSNSQFAAHR-------------------YADWLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMAQ------- 508 (694)
T ss_pred cCCeEEEeCcHHHHHH-------------------HHHHcCCC--hhHEEEECCCcCHHhcCCCchhhHHHHh-------
Confidence 2445666777654431 11112333 6799999999999888654322111000
Q ss_pred hccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH
Q 003636 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE 632 (806)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~ 632 (806)
+....+.+.++|+++||+.+.||++.+++|++++.+..|+++|+|+|+|+. .+++++
T Consensus 509 -----------~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~ 565 (694)
T PRK15179 509 -----------FDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVRE 565 (694)
T ss_pred -----------hccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHH
Confidence 111113456799999999999999999999999988889999999999977 567899
Q ss_pred HHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEE
Q 003636 633 LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 712 (806)
Q Consensus 633 li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~l 712 (806)
+++++++.++|.|+|++ .++..+|+ ++|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++
T Consensus 566 l~~~lgL~~~V~flG~~------~dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlL 638 (694)
T PRK15179 566 FAQRLGMGERILFTGLS------RRVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLT 638 (694)
T ss_pred HHHHcCCCCcEEEcCCc------chHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEE
Confidence 99999999999999954 25778888 599999999999999999999999999999999999999999999999
Q ss_pred ECCCCH--HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 713 IDPYHP--DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 713 i~p~d~--e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
++|+|. ++++++|.+++..+..++ .+++++++++.++|||+.++++++++|+
T Consensus 639 v~~~d~~~~~La~aL~~ll~~l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 639 LPADTVTAPDVAEALARIHDMCAADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred eCCCCCChHHHHHHHHHHHhChhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 998874 689999988775555554 4677899999999999999999999986
No 30
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.8e-35 Score=324.60 Aligned_cols=361 Identities=16% Similarity=0.190 Sum_probs=253.9
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++|+.+++| |..||++.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 68999998885 45799999999 77777899999999 88875332110 1112
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (806)
.+++++++|...... ...+.+ . ...+...+. ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~--~-~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY--D-ILAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH--H-HHHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 357788777543111 000000 0 011111111 134566666655544 33344555669999999998
Q ss_pred CCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCC
Q 003636 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (806)
Q Consensus 440 l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~ 519 (806)
...... .|...... .....+..+++.||.|+++|....+..+ ...|. .
T Consensus 118 ~~~~~~-----~~~~~~~~----~~~~~~~~~~~~ad~ii~~s~~~~~~~~-------------------~~~~~----~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAKR----YLKFGEKLAVKFADRLIADSPGIKEYLK-------------------EKYGR----D 165 (363)
T ss_pred cceeec-----ccccchhH----HHHHHHHHHHhhccEEEeCCHHHHHHHH-------------------HhcCC----C
Confidence 643221 11111110 1123456678999999999988765211 11122 2
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhc
Q 003636 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (806)
Q Consensus 520 k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~ 599 (806)
+ .+||||+|...+.+..... +..+. .+++.++++||+.+.||++.++++++++.+
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~~---------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEIL---------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhhH---------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 8999999988765411100 11232 334578899999999999999999998864
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCC-CC
Q 003636 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY-EA 677 (806)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~-E~ 677 (806)
+++|+|+|+++. ...+.+.+. .+++.++|+|+| .++.+++.++++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 667889999999 6678899999995 9999999998 99
Q ss_pred CcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003636 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (806)
Q Consensus 678 fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 757 (806)
||++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|.+ +.+|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~----l~~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEE----LEADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHH----HHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999966 7999988765 8888855 44899999999999999998999999
Q ss_pred HHHHHHHHHHH
Q 003636 758 IYSERLMTLAG 768 (806)
Q Consensus 758 ~~a~~ll~ly~ 768 (806)
.++++++++|+
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=1.5e-35 Score=330.29 Aligned_cols=287 Identities=20% Similarity=0.202 Sum_probs=214.2
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHH
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 484 (806)
..+||+||+|++....+. .+.+..++|+|++.|+..... ....|+ + ....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~~-~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLALP-LFKKKRGRPWIWRCHIDLSSP---NRRVWD-------F------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhHH-HhhhcCCCeEEEEeeeecCCC---cHHHHH-------H------HHHHHHhCCEEeecHHH
Confidence 458999999988753322 223334899999999753211 111111 1 12357789999888844
Q ss_pred HHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCC--CCchHHHHHHhhhcchhhhccCcccccc
Q 003636 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF--PYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (806)
Q Consensus 485 ~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~--p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (806)
.+. .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 221 1222 4455 999999975322 22211111 1123
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~ 642 (806)
.+|+ ++++++|+++||+++.||++.++++++++.+..++++|+|+|+|+.. +.+. .+.++++.+..++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~----~~~~---~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD----DPEG---WIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC----Cchh---HHHHHHHHHHhCCCCC
Confidence 3565 57889999999999999999999999999887789999999999651 1111 2234455556678889
Q ss_pred EEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHH
Q 003636 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 722 (806)
Q Consensus 643 V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la 722 (806)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..++|.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998431 36788889988 59999999999999999999999999999999999999999999999987 467788
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 723 ~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
++|.++ ++|++.+++|+++|++++.++|||+.++++++++|+.
T Consensus 329 ~~i~~l----l~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 329 VRILYL----LRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHH----HcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 888654 4899999999999999999999999999999999874
No 32
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=3.1e-35 Score=322.03 Aligned_cols=346 Identities=19% Similarity=0.226 Sum_probs=259.3
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCccccccccc
Q 003636 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (806)
Q Consensus 301 tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~i 380 (806)
.||.++++. +|+++|+++||+|. +++...+. ....+ ..+++++++++...+
T Consensus 9 ~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~------~~~~~----~~~~~~~~~~~~~~~------- 59 (355)
T cd03819 9 SGGVERGTL--------ELARALVERGHRSL----VASAGGRL------VAELE----AEGSRHIKLPFISKN------- 59 (355)
T ss_pred cCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCch------HHHHH----hcCCeEEEccccccc-------
Confidence 499999999 67777899999998 87753211 11111 123556666654321
Q ss_pred ccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhh
Q 003636 381 SRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYH 460 (806)
Q Consensus 381 sr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~ 460 (806)
.+..+ .+...+.+.+. ..+||+||+|+....+.+.++++..++|++.+.|+......
T Consensus 60 ----~~~~~-~~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~--------------- 116 (355)
T cd03819 60 ----PLRIL-LNVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF--------------- 116 (355)
T ss_pred ----hhhhH-HHHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH---------------
Confidence 11111 12223333343 35899999999877777888888889999999997643110
Q ss_pred chhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHH
Q 003636 461 FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540 (806)
Q Consensus 461 ~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~ 540 (806)
.....+..+|.++++|....+..+ ...|++ ..|+.+||||+|.+.|.+.....
T Consensus 117 ------~~~~~~~~~~~vi~~s~~~~~~~~-------------------~~~~~~--~~k~~~i~ngi~~~~~~~~~~~~ 169 (355)
T cd03819 117 ------RYNAIMARGDRVIAVSNFIADHIR-------------------ENYGVD--PDRIRVIPRGVDLDRFDPGAVPP 169 (355)
T ss_pred ------HHHHHHHhcCEEEEeCHHHHHHHH-------------------HhcCCC--hhhEEEecCCccccccCccccch
Confidence 012346789999999987655211 112333 67999999999999886643221
Q ss_pred HHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcc
Q 003636 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKD 620 (806)
Q Consensus 541 ~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d 620 (806)
..... .++.++. ++++++|+++||+.+.||++.+++++.++.+..++++|+|+|+++..
T Consensus 170 ~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~----- 228 (355)
T cd03819 170 ERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR----- 228 (355)
T ss_pred HHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCccc-----
Confidence 11100 1123343 56788999999999999999999999999887789999999998751
Q ss_pred hHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECC-CCCCCcHHHHHHHHcCCCEEEcCCcC
Q 003636 621 REEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGG 699 (806)
Q Consensus 621 ~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS-~~E~fGltvlEAMa~GlPVVAt~~GG 699 (806)
....+.+.+.++++++.++|.|+|+ .+++..+++ ++|++++|| ..|+||++++|||+||+|||+|+.||
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~-~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~ 298 (355)
T cd03819 229 ---RFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYA-LADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG 298 (355)
T ss_pred ---chHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHH-hCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC
Confidence 1234556677888899899999994 457899999 499999999 89999999999999999999999999
Q ss_pred cccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003636 700 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 759 (806)
Q Consensus 700 ~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~ 759 (806)
..|++.++.+|++++++|+++++++|.+.+ ..+++.+.+++++|++.+.++|||+.+
T Consensus 299 ~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 299 ARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred cHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 999999999999999999999999997544 358999999999999999999999853
No 33
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=9.6e-35 Score=315.38 Aligned_cols=372 Identities=18% Similarity=0.222 Sum_probs=262.7
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++|+++.+ |..||.+.++. +|++.|+++||+|+ ++|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6889987765 56799999999 67777799999999 887653221100 0000
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC--chHHHHHHHHHcCCcEEEEe
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD--GNLVASLLAYKMGITQCTIA 437 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~--~~lva~lla~~lgvp~v~t~ 437 (806)
+.......... .....+... .+..... ........+||+||+|... ....+...++..++|++++.
T Consensus 52 -~~~~~~~~~~~--~~~~~~~~~--------~~~~~~~-~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINV--AYGLNLARY--------LFPPSLL-AWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccch--hhhhhhhhh--------ccChhHH-HHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 00000000000 000000000 0001111 1122225689999998743 24556667778899999999
Q ss_pred cCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCC
Q 003636 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (806)
Q Consensus 438 H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~ 517 (806)
|+.......... .+.. .......+...++.++.++++|........ .+. +
T Consensus 120 ~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~---------------------~~~--~ 169 (375)
T cd03821 120 HGMLDPWALPHK-ALKK------RLAWFLFERRLLQAAAAVHATSEQEAAEIR---------------------RLG--L 169 (375)
T ss_pred cccccccccccc-hhhh------HHHHHHHHHHHHhcCCEEEECCHHHHHHHH---------------------hhC--C
Confidence 986432211000 1111 111122355678899999999876544111 111 2
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHh
Q 003636 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (806)
Q Consensus 518 ~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l 597 (806)
..++.++|||+|.+.|.+......+ +..+. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 6789999999999888765432211 12333 56789999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCC
Q 003636 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (806)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~ 677 (806)
.+.+++++|+++|.+.. .+...+..+++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 229 ~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~ 293 (375)
T cd03821 229 AERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSEN 293 (375)
T ss_pred hhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCC
Confidence 98889999999998765 12344556678889999999999 6677899999995 999999999999
Q ss_pred CcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003636 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (806)
Q Consensus 678 fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 757 (806)
||++++|||+||+|||+|+.||..+++.+ .+|+++++ +.++++++|.+++ +|++.++++++++++.+.++|||+
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999988 78998865 5599999996654 899999999999999999999999
Q ss_pred HHHHHHH
Q 003636 758 IYSERLM 764 (806)
Q Consensus 758 ~~a~~ll 764 (806)
.++++++
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 9999886
No 34
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=3.7e-34 Score=312.73 Aligned_cols=272 Identities=21% Similarity=0.293 Sum_probs=224.6
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCH
Q 003636 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (806)
Q Consensus 405 ~~kPDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 483 (806)
..+||+||+|+... ...+.+.++..++|++++.|+...... ... ......++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS--PDA---------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc--Cch---------------HHHHHHHhhCCEEEECCH
Confidence 45899999998754 445555555668999999996432110 000 123456889999999999
Q ss_pred HHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccc
Q 003636 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (806)
Q Consensus 484 ~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (806)
...+..+.. .|.+ ..++.++|||+|.+.|.+....
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~~------------------------ 174 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPPP------------------------ 174 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCcccc------------------------
Confidence 876622111 1233 6799999999998877654200
Q ss_pred cCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003636 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (806)
Q Consensus 564 ~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V 643 (806)
...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. ...+.+.++++++.++|
T Consensus 175 ----~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 175 ----PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred ----ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 03567789999999999999999999999988788999999999977 56788888999999999
Q ss_pred EEcccccCcCChHHHHHHHHccCcEEEECCCC------CCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCC
Q 003636 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH 717 (806)
Q Consensus 644 ~flG~~~~~~~~~el~~~la~aaDifV~PS~~------E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d 717 (806)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+++.|+..+++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 6678899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003636 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 763 (806)
Q Consensus 718 ~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~l 763 (806)
.++++++|.+++ +|++.+.+|+++|++++.++|||+..++++
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 999999997665 799999999999999999999999998763
No 35
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=7.8e-34 Score=309.27 Aligned_cols=387 Identities=18% Similarity=0.264 Sum_probs=273.1
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++|+.+.. |..||...++. .+++.|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6899998765 33489999999 66677799999999 8876533222111000 001122
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~--~lva~lla~~lgvp~v~t~ 437 (806)
.++++.+++...... ..++.+ +..+ ..|.......+.. ...+||+||++++.. ...+..+++..++|+++++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 356777776654321 000000 1111 1222223333321 256899999998432 4556666777799999999
Q ss_pred cCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCC
Q 003636 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (806)
Q Consensus 438 H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~ 517 (806)
|+............... ...+.+ ....++..++.+|.|+++|....+... ..++.
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRL--LRKLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHH--HHHHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 98754322111000000 000011 112356678999999999998765211 11232
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHh
Q 003636 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (806)
Q Consensus 518 ~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l 597 (806)
..++.++|||+|...+.+......+ ...+. ..++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6799999999998877665432211 11121 45778999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCC
Q 003636 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (806)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~ 677 (806)
.+. ++++|+|+|+|+. ...+.+.+...++ ++|.++| .++.+++..+++. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 877 8999999999877 4556666666666 5799999 6778899999995 999999999887
Q ss_pred C-----cHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Q 003636 678 F-----GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (806)
Q Consensus 678 f-----GltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~ 752 (806)
+ |++++|||+||+|||+++.||..+++.++.+|++++++|+++++++|.+++ .|++.++++++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 6 888999999999999999999999999989999999999999999997655 8999999999999999998
Q ss_pred hCCHHHHHHHHH
Q 003636 753 RYTWKIYSERLM 764 (806)
Q Consensus 753 ~ysw~~~a~~ll 764 (806)
+|||+.++++++
T Consensus 383 ~~s~~~~~~~~~ 394 (394)
T cd03794 383 KFSREKLAERLL 394 (394)
T ss_pred hhcHHHHHHhcC
Confidence 999999998863
No 36
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5e-35 Score=337.34 Aligned_cols=295 Identities=18% Similarity=0.259 Sum_probs=233.8
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCC-C-ChhhHhh-hhhhhhchhhhhHHHHHhhhCCEEEe
Q 003636 405 QGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYP-D-SDIYWKK-FDEKYHFSCQFTADLIAMNNADFIIT 480 (806)
Q Consensus 405 ~~kPDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~-~-s~~~~~~-l~~~y~~~~~~~~e~~a~~~AD~IIt 480 (806)
..++|+||+|... +++.+.++++..|+|+|+|.|+....... . ....|.. .............++.+++.||.|++
T Consensus 171 ~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~ 250 (475)
T cd03813 171 LPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITT 250 (475)
T ss_pred CCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEe
Confidence 3588999999754 46788888999999999999986431100 0 0000000 00000001111245678999999999
Q ss_pred cCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccc
Q 003636 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (806)
Q Consensus 481 ~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (806)
+|....+. ....|++ ..|+.+||||+|.+.|.+....
T Consensus 251 ~s~~~~~~--------------------~~~~g~~--~~ki~vIpNgid~~~f~~~~~~--------------------- 287 (475)
T cd03813 251 LYEGNRER--------------------QIEDGAD--PEKIRVIPNGIDPERFAPARRA--------------------- 287 (475)
T ss_pred cCHHHHHH--------------------HHHcCCC--HHHeEEeCCCcCHHHcCCcccc---------------------
Confidence 99876541 1112343 6799999999999888764321
Q ss_pred ccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003636 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (806)
Q Consensus 561 ~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~ 640 (806)
+ .++++++|+++||+.+.||++.+++|++++.+..|+++|+|+|+++. ..++.++++++++++++.
T Consensus 288 ----~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~l~ 353 (475)
T cd03813 288 ----R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLGLE 353 (475)
T ss_pred ----c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhCCC
Confidence 0 03567899999999999999999999999988889999999999854 124567788999999999
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccccccc------CCcEEEEC
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH------GASGFHID 714 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d------g~~G~li~ 714 (806)
++|+|+| ..++..+++ ++|++|+||..|+||++++|||+||+|||+|+.||..|++.+ |.+|++++
T Consensus 354 ~~V~f~G-------~~~v~~~l~-~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 354 DNVKFTG-------FQNVKEYLP-KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVP 425 (475)
T ss_pred CeEEEcC-------CccHHHHHH-hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEEC
Confidence 9999999 235777888 599999999999999999999999999999999999999988 67999999
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 715 p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
|+|+++++++|.+++ +|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 426 ~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 426 PADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999996654 89999999999999999999999999999999984
No 37
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=8.1e-34 Score=308.35 Aligned_cols=333 Identities=15% Similarity=0.164 Sum_probs=239.5
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecC
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g 358 (806)
|||++|++..+|- +.|..||.++++. +|++.|.++||+|. +++...+.... .
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~------ 52 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----P------ 52 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----c------
Confidence 7999999876642 3467899999999 66667799999999 88865322110 0
Q ss_pred CCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003636 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (806)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H 438 (806)
.......+.. ................+.+.+. ..+||+||+|.+..... +++..++|+|++.|
T Consensus 53 --~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 53 --LVPVVPEPLR---------LDAPGRDRAEAEALALAERALA---AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred --eeeccCCCcc---------cccchhhHhhHHHHHHHHHHHh---cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0011111110 0000000011122222233332 45899999999887654 56778999999999
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
+....... + .......++.++++|....+. . .. .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~-------------------~-----~~--~ 149 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRP-------------------W-----PP--L 149 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhh-------------------c-----cc--c
Confidence 86432210 0 112456778889988876541 0 01 1
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~ 598 (806)
.++.+||||+|.+.|.+. ..+++.|+++||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578899999999887652 2356789999999999999999999865
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC-CC
Q 003636 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YE 676 (806)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~-l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~-~E 676 (806)
.+++|+|+|+|.. ...+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233334444333 568999999 6677899999995 999999997 59
Q ss_pred CCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003636 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 756 (806)
Q Consensus 677 ~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw 756 (806)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999996653 322 35678888899999
Q ss_pred HHHHHHHHHHHH
Q 003636 757 KIYSERLMTLAG 768 (806)
Q Consensus 757 ~~~a~~ll~ly~ 768 (806)
+.++++|+++|+
T Consensus 324 ~~~~~~~~~~y~ 335 (335)
T cd03802 324 ARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhC
Confidence 999999999884
No 38
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=2e-33 Score=302.14 Aligned_cols=373 Identities=22% Similarity=0.339 Sum_probs=273.1
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||+++++... |..||...++. .|++.|.+.||+|. +++............ ..
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~~~------~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEEEV------GG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCceeee------cC-
Confidence 6889988765 23689999999 67777788999999 888764332111000 00
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (806)
.......... ..........+...+...+. ..+||+||++.+.........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 00001111122222333333 34899999999887665557778889999999999
Q ss_pred CCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCC
Q 003636 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (806)
Q Consensus 440 l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~ 519 (806)
.......... ..........+...++.+|.+++.|....+...+ ..+.. ..
T Consensus 118 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~-------------------~~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNEL--------GLLLKLARALERRALRRADRIIAVSEATREELRE-------------------LGGVP--PE 168 (374)
T ss_pred chhhccccch--------hHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHh-------------------cCCCC--CC
Confidence 7553322110 0000111123556789999999999877652111 11111 36
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhc
Q 003636 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (806)
Q Consensus 520 k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~ 599 (806)
++.++|||+|...+.+.. ...+ ...+. ..+++.|+++|++...||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876643 1111 01111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 003636 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (806)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fG 679 (806)
..++++|+++|++.. ...+.+.+++++..++|.|+| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 888999999997765 567778888889999999999 6677899999995 99999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003636 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 759 (806)
Q Consensus 680 ltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~ 759 (806)
++++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+++ +|++.+.++++++++.+.+.|||+.+
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999999999996654 89999999999999999999999999
Q ss_pred HHHHHHHH
Q 003636 760 SERLMTLA 767 (806)
Q Consensus 760 a~~ll~ly 767 (806)
++++.++|
T Consensus 366 ~~~~~~~~ 373 (374)
T cd03801 366 AARTEEVY 373 (374)
T ss_pred HHHHHHhh
Confidence 99999876
No 39
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.1e-33 Score=307.90 Aligned_cols=363 Identities=19% Similarity=0.271 Sum_probs=261.5
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||+++++... |..||.+.++. .|+++|+++||+|+ ++|......... . .
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~-~------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--P-A------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--C-C-------
Confidence 6899987664 45589999998 77777899999999 888663321110 0 0
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~-~lva~lla~~lgvp~v~t~H 438 (806)
....+...+...... . ++... ....+.+.+. ..+||+||++.... +..+..++++.++|++.++|
T Consensus 50 ~~~~~~~~~~~~~~~-----~-~~~~~-----~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPE-----I-RLALP-----PRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccc-----e-Eeccc-----chhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 112222222211110 0 00000 0112222222 34899999987654 56677778889999999999
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
+.......... ..... .+. ........+.+|.++++|....+. + ...+ .
T Consensus 116 ~~~~~~~~~~~--~~~~~---~~~--~~~~~~~~~~~d~i~~~s~~~~~~-------~---------------~~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYYG--LGPLS---WLA--WAYLRWFHNRADRVLVPSPSLADE-------L---------------RARG--F 164 (364)
T ss_pred cChHHHhhhcc--cchHh---Hhh--HHHHHHHHHhCCEEEeCCHHHHHH-------H---------------hccC--C
Confidence 85432111000 00000 000 123445688999999999886541 1 0111 4
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~ 598 (806)
.++.+++||+|.+.|.|........ +.++ +.++++|+++|++.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 6889999999999887654322211 1122 356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 003636 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (806)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~f 678 (806)
+. ++++|+|+|+++. ...++ +..++|.|.| .++.+++..+++. +|+++.||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 77 8999999999876 22222 4567899999 6678899999995 9999999999999
Q ss_pred cHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003636 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 758 (806)
Q Consensus 679 GltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 758 (806)
|++++|||+||+|||+++.|+..|+++++.+|++++++|.++++++|.+++ .|++.++++++++++.+ ++|||+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 999999999999999999999999999999999999999999999997655 89999999999999998 8899999
Q ss_pred HHHHHHHHHH
Q 003636 759 YSERLMTLAG 768 (806)
Q Consensus 759 ~a~~ll~ly~ 768 (806)
+++++.++|+
T Consensus 355 ~~~~~~~~~~ 364 (364)
T cd03814 355 FLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhC
Confidence 9999999873
No 40
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.3e-33 Score=308.71 Aligned_cols=354 Identities=19% Similarity=0.236 Sum_probs=256.3
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ +++........ ... .
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~~---~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGR------DEE---R 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcch------hhh---c
Confidence 6899997765 55799999999 77777899999999 88765332211 111 1
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (806)
.+..+.+++..... ...+.... ....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNV----------ASTPFSPS----FFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeeccccc----------ccccccHH----HHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 12355555432210 01111111 111111 2256899999998765333233333368899999996
Q ss_pred CCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCC
Q 003636 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (806)
Q Consensus 440 l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~ 519 (806)
..... ... ...++ ..+...++.||.|+++|....+.... +..+..
T Consensus 116 ~~~~~----~~~----~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQ----KLL----LKLYR-----PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhcc----chh----hhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 32111 000 11111 12445789999999999876541110 111146
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhc
Q 003636 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (806)
Q Consensus 520 k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~ 599 (806)
++.+||||+|.+.+.+....... .... +.++++|+++||+.+.||++.++++++++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEEA--------------------IWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhhH--------------------hhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 88999999999887654322110 0111 456789999999999999999999999986
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC--CCC
Q 003636 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEA 677 (806)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~--~E~ 677 (806)
+++|+|+|+|+. ...+.+.++++++.++|.|+| .++.+++.++++. +|++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 799999999876 556788888889999999999 6778899999995 999999996 599
Q ss_pred CcHHHHHHHHcCCCEEEcCCcCccccccc-CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003636 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEH-GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTW 756 (806)
Q Consensus 678 fGltvlEAMa~GlPVVAt~~GG~~EiI~d-g~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw 756 (806)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999999886 99999999999999999996655 89999999999999999999999
Q ss_pred HHHH
Q 003636 757 KIYS 760 (806)
Q Consensus 757 ~~~a 760 (806)
+.++
T Consensus 354 ~~~~ 357 (357)
T cd03795 354 DRMV 357 (357)
T ss_pred HhhC
Confidence 9764
No 41
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=1.6e-33 Score=308.30 Aligned_cols=358 Identities=17% Similarity=0.250 Sum_probs=255.4
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++++++. ..||.+.++. +|++.|.++||+|+ +++...... .. . ...
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-~~----~---~~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGESE-VK----P---PID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCCC-cc----c---hhh-
Confidence 477776542 2589999999 67777899999999 777542111 00 0 000
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEec
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAH 438 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~l-gvp~v~t~H 438 (806)
......++.... .+.++.. ...+.+.+. +.+||+||+|...+++++.+++... ++|++.+.|
T Consensus 49 -~~~~~~~~~~~~------------~~~~~~~-~~~~~~~~~---~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSKN------------PLSFLLA-LWKLRKILR---QFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEeccccc------------chhhHHH-HHHHHHHHH---hcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 011112222110 1111111 112223333 3489999999888777666665543 678999999
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
+..... ... . .........++.++++|....+. +....+++ .
T Consensus 112 ~~~~~~------~~~------~-----~~~~~~~~~~~~~~~~s~~~~~~-------------------~~~~~~~~--~ 153 (360)
T cd04951 112 SKNEGG------RLR------M-----LAYRLTDFLSDLTTNVSKEALDY-------------------FIASKAFN--A 153 (360)
T ss_pred ccCchh------HHH------H-----HHHHHHhhccCceEEEcHHHHHH-------------------HHhccCCC--c
Confidence 753211 000 0 01122344577778878765441 11111233 6
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~ 598 (806)
.++.+||||+|...|.+........ ++.+++ ++++++++++||+.+.||++.+++++.++.
T Consensus 154 ~~~~~i~ng~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 154 NKSFVVYNGIDTDRFRKDPARRLKI-----------------RNALGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred ccEEEEccccchhhcCcchHHHHHH-----------------HHHcCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 7999999999998876654322221 233555 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 003636 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (806)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~f 678 (806)
+..++++|+|+|+|+. .+++.+.++++++.++|.|+|.+ +++..+++. +|++|+||..|+|
T Consensus 215 ~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~ 275 (360)
T cd04951 215 SDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGF 275 (360)
T ss_pred hhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEEEeccc------ccHHHHHHh-hceEEecccccCC
Confidence 8888999999999987 45678888888998999999943 467888884 9999999999999
Q ss_pred cHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003636 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKI 758 (806)
Q Consensus 679 GltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 758 (806)
|++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|.++++ .+++.+..++++ ++.+.++|||+.
T Consensus 276 ~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~ 349 (360)
T cd04951 276 GLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILK---MSGEERDIIGAR-RERIVKKFSINS 349 (360)
T ss_pred ChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHH
Confidence 9999999999999999999999999977 8999999999999999977652 577777777777 888899999999
Q ss_pred HHHHHHHHHH
Q 003636 759 YSERLMTLAG 768 (806)
Q Consensus 759 ~a~~ll~ly~ 768 (806)
++++++++|+
T Consensus 350 ~~~~~~~~y~ 359 (360)
T cd04951 350 IVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 42
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=1.1e-33 Score=305.89 Aligned_cols=363 Identities=17% Similarity=0.179 Sum_probs=265.7
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||+++++-.. .||.+.++. .|++.|.++|++|. +++...... ...... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~----~~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGE----LGEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchh----hhHHHH----h
Confidence 5777765433 389999999 67777889999998 776542211 111111 1
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEec
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAH 438 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~-lgvp~v~t~H 438 (806)
.++.++.++.... ...+ .+...+.+.+. +.+||+||++.......+.+.++. .++|++.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~----~~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDP----GALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccH----HHHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2456665554321 0111 11223333333 348999999987776666666666 6889999999
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
....... .|. ... .........+.+|.++++|....+.. .. .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~-----~~~~~~~~~~~~~~~i~~s~~~~~~~-------------------~~-~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRL-----VARLRRLLSSFIPLIVANSAAAAEYH-------------------QA-IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhH-----HHHHHHHhccccCeEEeccHHHHHHH-------------------HH-cCCC--h
Confidence 8654321 011 000 11123456778999999998765511 11 1333 6
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~ 598 (806)
.++.++|||+|...|.+........ ++.+++ ++++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 7899999999998876654332211 123555 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCC
Q 003636 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (806)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~ 677 (806)
+..++++|+|+|.+.. ......... ++++.++|.|+|. .+++..+++. +|++++||.+|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGE------RSDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEccc------cccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999876 233444444 7888999999993 3468888885 999999999999
Q ss_pred CcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003636 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (806)
Q Consensus 678 fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 757 (806)
||++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++++.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999997655 789999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003636 758 IYSERLMTLAG 768 (806)
Q Consensus 758 ~~a~~ll~ly~ 768 (806)
..++++.++|+
T Consensus 355 ~~~~~~~~~y~ 365 (365)
T cd03807 355 AMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 43
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=2.2e-33 Score=305.07 Aligned_cols=370 Identities=19% Similarity=0.264 Sum_probs=264.3
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++++...+ |..||....+. .++++|.++||+|+ ++|...+...... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~---------~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE---------EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc---------cc
Confidence 6889987755 67799999998 77778899999999 8886644321110 00
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~-~lva~lla~~lgvp~v~t~H 438 (806)
......+.+.... ......+. +...+...+. ..+||+||++++.. +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~~-------~~~~~~~~----~~~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFKY-------PDFRLPLP----IPRALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccchh-------hhhhcccc----HHHHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 0111111111100 00000111 1112222222 45899999998654 56677788889999999999
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhh-hHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQF-TADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~-~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~ 517 (806)
+.......... ........... ..++..++.||.|+++|....+..+ + .+.
T Consensus 117 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~----~----------------~~~--- 168 (374)
T cd03817 117 TMYEDYTHYVP-----LGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLR----E----------------YGV--- 168 (374)
T ss_pred CCHHHHHHHHh-----cccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHH----h----------------cCC---
Confidence 86431100000 00000000011 3456678999999999987554111 1 122
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHh
Q 003636 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (806)
Q Consensus 518 ~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l 597 (806)
..++.++|||+|...+.+......+ +.++. ++++++|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 4568999999999888765433221 12333 45678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCC
Q 003636 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (806)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~ 677 (806)
.+..++++|+++|+++. .+.+.++++++++.++|.|+| .++.+++..+++. +|++++|+..|+
T Consensus 228 ~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~ 290 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTET 290 (374)
T ss_pred HHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccC
Confidence 88778999999999876 566888888899999999999 6678899999995 999999999999
Q ss_pred CcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003636 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (806)
Q Consensus 678 fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 757 (806)
+|++++|||+||+|||+++.|+..|++.++.+|++++++|. +++++|.++ .+|++.+++|++++++.+.+. +
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l----~~~~~~~~~~~~~~~~~~~~~-~-- 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRL----LQDPELRRRLSKNAEESAEKF-S-- 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHH----HhChHHHHHHHHHHHHHHHHH-H--
Confidence 99999999999999999999999999999999999998887 888888654 489999999999999998554 3
Q ss_pred HHHHHHHHHHH
Q 003636 758 IYSERLMTLAG 768 (806)
Q Consensus 758 ~~a~~ll~ly~ 768 (806)
.++++.++|+
T Consensus 363 -~~~~~~~~~~ 372 (374)
T cd03817 363 -FAKKVEKLYE 372 (374)
T ss_pred -HHHHHHHHHh
Confidence 5666666665
No 44
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=6.1e-33 Score=302.71 Aligned_cols=358 Identities=16% Similarity=0.184 Sum_probs=251.4
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++|+++. |..||.+.++. .|+++|.+.||+|. +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998752 44799999999 67777899999998 766543221100000 00
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc---hHHH---HHHHHHcCCcE
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG---NLVA---SLLAYKMGITQ 433 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~---~lva---~lla~~lgvp~ 433 (806)
...... . ...... ...+.+.+. ..+||+||++.+.+ ...+ ....+..++|+
T Consensus 52 ~~~~~~-~--------------~~~~~~-----~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVI-V--------------LDNPLD-----YRRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeee-e--------------cCCchh-----HHHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 000000 0 000010 112222333 34899999987432 2222 22223489999
Q ss_pred EEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeecc
Q 003636 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (806)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~G 513 (806)
|.+.|+..... ...+ ........++.+|.|+++|..... + + +
T Consensus 109 i~~~h~~~~~~----~~~~-----------~~~~~~~~~~~~d~ii~~s~~~~~---~----~-----------~----- 150 (366)
T cd03822 109 VVTLHTVLLHE----PRPG-----------DRALLRLLLRRADAVIVMSSELLR---A----L-----------L----- 150 (366)
T ss_pred EEEEecCCccc----cchh-----------hhHHHHHHHhcCCEEEEeeHHHHH---H----H-----------H-----
Confidence 99999861100 0000 011234568899999999733222 1 1 0
Q ss_pred CCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHH
Q 003636 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (806)
Q Consensus 514 i~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea 593 (806)
......++.+||||+|...+.+..... . .+. ..++++|+++|++.+.||++.++++
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~-~---------------------~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLK-A---------------------LGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhH-h---------------------hcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 010146999999999987765543211 0 111 4578899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECC
Q 003636 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (806)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS 673 (806)
+.++.+..++++|+|+|++..... .......++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~-------~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE-------RYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh-------hhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 999988888999999999865110 001111145788899999999982 2778999999995 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003636 674 FYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (806)
Q Consensus 674 ~~E--~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 751 (806)
.+| +||++++|||+||+|||+|+.|+ .+.+.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77778888999999999999999996655 899999999999999996
Q ss_pred HhCCHHHHHHHHHHHHH
Q 003636 752 ERYTWKIYSERLMTLAG 768 (806)
Q Consensus 752 ~~ysw~~~a~~ll~ly~ 768 (806)
+ |||+.+++++.++|+
T Consensus 351 ~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A-MSWERVAERYLRLLA 366 (366)
T ss_pred h-CCHHHHHHHHHHHhC
Confidence 6 999999999999873
No 45
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=1.4e-33 Score=309.30 Aligned_cols=346 Identities=14% Similarity=0.175 Sum_probs=248.6
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||+++++.. ..||.+.++. ++++.|.+.||+|+ +++...... ...... . .
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~---~-~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEI---E-K 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHH---H-H
Confidence 678887643 3599999999 56666688999999 887653221 011111 1 1
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~-v~t~H 438 (806)
.++.+++++.... ..+ .+...+.+.+. ..+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2456666544321 111 22222333232 45899999999887667777777778775 55677
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
.............+ . ...+...++.+|.++++|....+.+. .. + ..
T Consensus 113 ~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~i~~s~~~~~~~~------------------~~---~--~~ 158 (358)
T cd03812 113 NTSDSHDKKKKILK--------Y---KVLRKLINRLATDYLACSEEAGKWLF------------------GK---V--KN 158 (358)
T ss_pred cccccccccchhhH--------H---HHHHHHHHhcCCEEEEcCHHHHHHHH------------------hC---C--Cc
Confidence 65332211111000 0 12345578889999999988655211 10 1 26
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~ 598 (806)
.++.+||||+|.+.|.+........ +..+. ..++++|+++||+.+.||++.++++++++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKKR------------------RELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhHH------------------HHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 7899999999998876654322110 11233 467899999999999999999999999999
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 003636 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (806)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~f 678 (806)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+|+. +|++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999987 5678888889999999999994 3468888885 9999999999999
Q ss_pred cHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003636 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (806)
Q Consensus 679 GltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 751 (806)
|++++|||+||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+.++.+...+.....
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~ 347 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLD 347 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccch
Confidence 9999999999999999999999999988 4677777778999999996655 899999988888776653
No 46
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=2.6e-33 Score=317.40 Aligned_cols=369 Identities=14% Similarity=0.125 Sum_probs=243.9
Q ss_pred CcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCC-CceeeceeEEeccCCCCCCC-------c
Q 003636 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQG-LDISPKILIVTRLIPDAKGT-------T 348 (806)
Q Consensus 277 ~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G-~eV~~~ilVvT~~~~~~~g~-------~ 348 (806)
+.|||+|++..+. |..+|..+.++ .++..|+++| |+|+ |+.+..+..... +
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 3599999998776 67899999999 6777889999 7999 998876532110 0
Q ss_pred ccccce---eecCCCceEEEEecCCCcccccccccc--cCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH-
Q 003636 349 CNQRLE---RVSGTEHTHILRVPFRSEKGILRQWIS--RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLV- 421 (806)
Q Consensus 349 ~~~~~e---~i~g~~~v~Ilrvp~~~~~~~~~~~is--r~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~-~lv- 421 (806)
+....+ .+....+.++.++|..+... .+..++ +..+++ ..++.+.+.+ .+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~-yp~r~~~~~r~~~~-----~~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKF-YPGKFSTDKRSILP-----VGDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEeccccccc-CcccccccccccCC-----hHHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 100110 01111123455554432210 000010 011111 1244445543 4899999999875 554
Q ss_pred -HHHHHHHcCCcEEEEecCCCcccCCC-Chh-hHhhhhhhhhchhhhhHHHHH-hhhCCEEEecCHHHHhhccccccccc
Q 003636 422 -ASLLAYKMGITQCTIAHALEKTKYPD-SDI-YWKKFDEKYHFSCQFTADLIA-MNNADFIITSTYQEIAGTKNTVGQYE 497 (806)
Q Consensus 422 -a~lla~~lgvp~v~t~H~l~~~k~~~-s~~-~~~~l~~~y~~~~~~~~e~~a-~~~AD~IIt~S~~~~~~~k~~v~qy~ 497 (806)
|..+++++++ +|.++|+... .|.. ... ....+. .++. .... -..+|.|+++|....+ +
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~~~l--~~~~-----~~~~~r~~~d~vi~pS~~~~~--------l- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVKAFL--LKYI-----NSWVVDIYCHKVIRLSAATQD--------Y- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHHHhccchHHHHH--HHHH-----HHHHHHHhcCEEEccCHHHHH--------H-
Confidence 6666777765 8889998432 1110 000 000000 0001 1111 1248999999975432 0
Q ss_pred ccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCC--CCEE
Q 003636 498 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS--KPIV 575 (806)
Q Consensus 498 ~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~--k~iI 575 (806)
.......++|||.+.|.|....... ..+ ..+ .+.+
T Consensus 195 --------------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~---~~~~~~~~~ 231 (462)
T PLN02846 195 --------------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN---GEQAFTKGA 231 (462)
T ss_pred --------------------hhCEEecCceechhhcCCCcccHhh--------------------hcC---CCCCcceEE
Confidence 1122334589999988776432111 011 122 3579
Q ss_pred EEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCCh
Q 003636 576 FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARN 655 (806)
Q Consensus 576 ~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~ 655 (806)
+|+|||.+.||++.|+++++++.+..++++|+|+|+|++ .++++++++++++..++ |.|. .+.
T Consensus 232 l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G~----~~~ 294 (462)
T PLN02846 232 YYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPGR----DHA 294 (462)
T ss_pred EEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECCC----CCH
Confidence 999999999999999999999988778999999999998 67899999999887555 8873 333
Q ss_pred HHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCC
Q 003636 656 GELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN 735 (806)
Q Consensus 656 ~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~d 735 (806)
+ .+++ ++|+||+||.+|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|.+++. ++
T Consensus 295 ~---~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~ 364 (462)
T PLN02846 295 D---PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EE 364 (462)
T ss_pred H---HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cC
Confidence 3 3555 58999999999999999999999999999999998 59999999999984 89999999987662 23
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 736 PSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 736 p~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
+ ..++.+++ ++|||+..+++++++|+.-
T Consensus 365 ~---~~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 365 P---APLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred c---hhHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 3 22333333 5899999999999999855
No 47
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1e-33 Score=314.46 Aligned_cols=347 Identities=16% Similarity=0.214 Sum_probs=240.8
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHC--CCceeeceeEEeccCCCCCCCcccccceee
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~--G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i 356 (806)
|||+++++. + |..||++.++. ++++.|.++ |++|. ++++..+... ......
T Consensus 1 mkI~~~~~~-~---------~~~GG~e~~~~--------~l~~~L~~~~~g~~v~----v~~~~~~~~~-----~~~~~~ 53 (359)
T PRK09922 1 MKIAFIGEA-V---------SGFGGMETVIS--------NVINTFEESKINCEMF----FFCRNDKMDK-----AWLKEI 53 (359)
T ss_pred CeeEEeccc-c---------cCCCchhHHHH--------HHHHHhhhcCcceeEE----EEecCCCCCh-----HHHHhc
Confidence 799999864 2 34599999999 666677889 77777 7776532110 000000
Q ss_pred cCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE--E
Q 003636 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ--C 434 (806)
Q Consensus 357 ~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~--v 434 (806)
.-.......++++. ... .....+.+.+. +.+||+||+|.+.....+.++++..++|. +
T Consensus 54 ~~~~~~~~~~~~~~----------~~~-------~~~~~l~~~l~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (359)
T PRK09922 54 KYAQSFSNIKLSFL----------RRA-------KHVYNFSKWLK---ETQPDIVICIDVISCLYANKARKKSGKQFKIF 113 (359)
T ss_pred chhcccccchhhhh----------ccc-------HHHHHHHHHHH---hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEE
Confidence 00000000011100 000 11122333343 35899999998766677777777777654 4
Q ss_pred EEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccC
Q 003636 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (806)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi 514 (806)
.+.|...... . . + ....+..+|.++++|....+.+. ..|+
T Consensus 114 ~~~h~~~~~~----~-----~---~--------~~~~~~~~d~~i~~S~~~~~~~~--------------------~~~~ 153 (359)
T PRK09922 114 SWPHFSLDHK----K-----H---A--------ECKKITCADYHLAISSGIKEQMM--------------------ARGI 153 (359)
T ss_pred EEecCccccc----c-----h---h--------hhhhhhcCCEEEEcCHHHHHHHH--------------------HcCC
Confidence 4555421100 0 0 0 00124689999999988655211 1244
Q ss_pred CCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCC--cCCCHHHHHH
Q 003636 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD--HVKNMTGLVE 592 (806)
Q Consensus 515 ~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~--~~Kgi~~Lle 592 (806)
+ ..|+.+||||+|.+.+..... ...++++|+++||+. +.||++.+++
T Consensus 154 ~--~~ki~vi~N~id~~~~~~~~~-----------------------------~~~~~~~i~~~Grl~~~~~k~~~~l~~ 202 (359)
T PRK09922 154 S--AQRISVIYNPVEIKTIIIPPP-----------------------------ERDKPAVFLYVGRLKFEGQKNVKELFD 202 (359)
T ss_pred C--HHHEEEEcCCCCHHHccCCCc-----------------------------ccCCCcEEEEEEEEecccCcCHHHHHH
Confidence 3 678999999999654432110 023568899999996 4699999999
Q ss_pred HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEEC
Q 003636 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (806)
Q Consensus 593 a~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~P 672 (806)
++.++. ++++|+|+|+|++ .++++++++++++.++|.|+|++.+ +.+++..+|+. +|++|+|
T Consensus 203 a~~~~~---~~~~l~ivG~g~~------------~~~l~~~~~~~~l~~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~ 264 (359)
T PRK09922 203 GLSQTT---GEWQLHIIGDGSD------------FEKCKAYSRELGIEQRIIWHGWQSQ--PWEVVQQKIKN-VSALLLT 264 (359)
T ss_pred HHHhhC---CCeEEEEEeCCcc------------HHHHHHHHHHcCCCCeEEEecccCC--cHHHHHHHHhc-CcEEEEC
Confidence 999874 3799999999987 5678899999999999999997643 45788888885 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCCEEEcC-CcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Q 003636 673 AFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (806)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVVAt~-~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 751 (806)
|.+|+||++++||||||+|||+|+ .||+.|+|.++.+|++++|+|+++++++|.+++ +|++.+ +.++.....
T Consensus 265 s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~----~~~~~~---~~~~~~~~~ 337 (359)
T PRK09922 265 SKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVI----SGEVKY---QHDAIPNSI 337 (359)
T ss_pred CcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHH----hCcccC---CHHHHHHHH
Confidence 999999999999999999999999 999999999999999999999999999997665 777644 123333344
Q ss_pred HhCCHHHHHHHHHHHHH
Q 003636 752 ERYTWKIYSERLMTLAG 768 (806)
Q Consensus 752 ~~ysw~~~a~~ll~ly~ 768 (806)
.+|+-+.+.+++.++|.
T Consensus 338 ~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 338 ERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHhhHHHHHHHHHHHHH
Confidence 67788888888888775
No 48
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=7.2e-33 Score=314.10 Aligned_cols=391 Identities=14% Similarity=0.078 Sum_probs=257.1
Q ss_pred CCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccccee
Q 003636 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 355 (806)
Q Consensus 276 p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~ 355 (806)
|...||++++.-. +|.+..+. +++++|+++||+|+ |+|...+.. .+.
T Consensus 1 ~~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~ 47 (415)
T cd03816 1 PKRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDE 47 (415)
T ss_pred CCccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHH
Confidence 4457888887622 34445556 67778899999999 888653211 111
Q ss_pred ecCCCceEEEEecCCC-cccccccccccCCchhhHHHHHH---HHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHH
Q 003636 356 VSGTEHTHILRVPFRS-EKGILRQWISRFDVWPYLETFTE---DVGSEITAELQGFPDFIIGNYSDG---NLVASLLAYK 428 (806)
Q Consensus 356 i~g~~~v~Ilrvp~~~-~~~~~~~~isr~~i~~yl~~f~~---~~~~~i~~~~~~kPDlIh~h~~~~---~lva~lla~~ 428 (806)
.....++.++.++..+ ..+. ......|+..... .+...+.. ..+||+||+|.+.. ...+.++++.
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~ 119 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLL 119 (415)
T ss_pred HhcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 1122357888776653 1110 0111122211111 11121222 45899999987553 4456667777
Q ss_pred cCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccc
Q 003636 429 MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLY 508 (806)
Q Consensus 429 lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~ 508 (806)
.++|+|++.|+.+..... .... .......+. ...+...++.+|.||++|....+...
T Consensus 120 ~~~~~V~~~h~~~~~~~~-~~~~--~~~~~~~~~--~~~e~~~~~~ad~ii~vS~~~~~~l~------------------ 176 (415)
T cd03816 120 RRTKLIIDWHNYGYTILA-LKLG--ENHPLVRLA--KWYEKLFGRLADYNLCVTKAMKEDLQ------------------ 176 (415)
T ss_pred hCCeEEEEcCCchHHHHh-cccC--CCCHHHHHH--HHHHHHHhhcCCEeeecCHHHHHHHH------------------
Confidence 899999999986431110 0000 000001111 12466788999999999998765211
Q ss_pred eeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcc-ccccccCCCCCCCCCEEEEEecCCcCCCH
Q 003636 509 RVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE-QNDEHVGTLSDRSKPIVFSMARLDHVKNM 587 (806)
Q Consensus 509 ~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~-~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi 587 (806)
..|++ ..|+.|||||. ...|.|........... . . ..-+++. ......+.. +++..+++++||+.+.||+
T Consensus 177 --~~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~ 247 (415)
T cd03816 177 --QFNNW--KIRATVLYDRP-PEQFRPLPLEEKHELFL-K-L-AKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDF 247 (415)
T ss_pred --hhhcc--CCCeeecCCCC-HHHceeCcHHHHHHHHH-h-c-cccccccccccccceec-CCCceEEEEeccccCCCCH
Confidence 12333 78999999994 56677765332111000 0 0 0000000 000011221 2345678889999999999
Q ss_pred HHHHHHHHHhhc------cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHH
Q 003636 588 TGLVECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRY 661 (806)
Q Consensus 588 ~~Llea~~~l~~------~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~ 661 (806)
+.|++|+.++.+ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| .++.+++..+
T Consensus 248 ~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~ 311 (415)
T cd03816 248 GILLDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKL 311 (415)
T ss_pred HHHHHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHH
Confidence 999999999864 347899999999987 678899999999976555556 5678999999
Q ss_pred HHccCcEEEECC---CCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCC---
Q 003636 662 IADTKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN--- 735 (806)
Q Consensus 662 la~aaDifV~PS---~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~d--- 735 (806)
|+ ++|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|.+++ +|
T Consensus 312 l~-~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~ 384 (415)
T cd03816 312 LA-SADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPN 384 (415)
T ss_pred HH-hCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCC
Confidence 99 599999753 35789999999999999999999999999999999999994 8999999997654 67
Q ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003636 736 PSHWKKISDGGLKRIYERYTWKIYSERLM 764 (806)
Q Consensus 736 p~~~~~ms~~ar~~v~~~ysw~~~a~~ll 764 (806)
++.+++|+++|++.. .++|+...++.+
T Consensus 385 ~~~~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 385 RGKLNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 999999999999987 567877666654
No 49
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=3.8e-33 Score=305.89 Aligned_cols=343 Identities=17% Similarity=0.215 Sum_probs=246.8
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecC
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g 358 (806)
|||++++... ..||.+.++. .++++|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997642 2489999988 66677799999999 7764311
Q ss_pred CCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc--CCcEEEE
Q 003636 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM--GITQCTI 436 (806)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~l--gvp~v~t 436 (806)
. +.+.+. ..+||+||.|.+..+.+......+. ++|.|++
T Consensus 42 ------------~------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ------------A------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ------------h------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 001111 3489999999876654444444444 9999999
Q ss_pred ecCCCcccCC----CChhhH-hh-----hhhhh---hchhhhh--HHHHHhhhCCEEEecCHHHHhhccccccccccccc
Q 003636 437 AHALEKTKYP----DSDIYW-KK-----FDEKY---HFSCQFT--ADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTA 501 (806)
Q Consensus 437 ~H~l~~~k~~----~s~~~~-~~-----l~~~y---~~~~~~~--~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~ 501 (806)
+|+....... .....| .. ....+ ....+.. ........++.++++|....+..+ +
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~----~------ 152 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCAR----S------ 152 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHH----h------
Confidence 9986432210 000000 00 00000 0011110 111122467788888876544111 1
Q ss_pred ccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecC
Q 003636 502 FTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL 581 (806)
Q Consensus 502 f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL 581 (806)
...+...++.++|||+|.+.|.|......+ +.+++ +++++++++.|+.
T Consensus 153 -----------~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 153 -----------SSLFKGIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred -----------ccccCCCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 111226799999999999988775543221 22444 4566778777777
Q ss_pred Cc--CCCHHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCC-hHH
Q 003636 582 DH--VKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR-NGE 657 (806)
Q Consensus 582 ~~--~Kgi~~Llea~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~-~~e 657 (806)
.. .||++.++++++.+.+. .+++.++++|++... .. .++.++|.|+| .++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~------------~~-------~~~~~~v~~~g----~~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE------------IP-------PDLPFPVHYLG----SLNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh------------hh-------ccCCCceEecC----CcCCHHH
Confidence 65 89999999999998765 678999999998661 00 14567899999 445 678
Q ss_pred HHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHH
Q 003636 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (806)
Q Consensus 658 l~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~ 737 (806)
+..+++ .+|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ +|++
T Consensus 258 ~~~~~~-~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYS-AADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHH-hCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 889999 49999999999999999999999999999999999999999999999999999999999997655 7999
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 738 HWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 738 ~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
.+++|++++++.+.++|||+.++++|.++|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 333 EREELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999863
No 50
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=3.1e-32 Score=292.06 Aligned_cols=345 Identities=17% Similarity=0.237 Sum_probs=251.2
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||+++++... + .||.+.++. +|+++|+++||+|+ +++..... .. .. ...
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~--~~----~~---~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGE--PP----FY---ELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCC--CC----cc---ccC
Confidence 6888887654 2 589999998 67777789999999 88765432 00 00 011
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcC-CcEEEEec
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG-ITQCTIAH 438 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lg-vp~v~t~H 438 (806)
.++.+..++...... +.. .+ .+...+.+.+. ..+||+||++.+.. ...+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----~~~---~~----~~~~~~~~~l~---~~~~d~i~~~~~~~--~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----LLA---RF----KKLRRLRKLLK---NNKPDVVISFLTSL--LTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----hhc---cc----cchHHHHHhhc---ccCCCEEEEcCchH--HHHHHHHhhccccEEEecC
Confidence 234555544432110 000 00 11112222232 35999999998772 2222333444 49999999
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
+...... ....+ ...+...++.+|.+++.|...... + .....
T Consensus 114 ~~~~~~~--~~~~~------------~~~~~~~~~~~d~ii~~s~~~~~~-------~-----------------~~~~~ 155 (348)
T cd03820 114 NSPDAYK--KRLRR------------LLLRRLLYRRADAVVVLTEEDRAL-------Y-----------------YKKFN 155 (348)
T ss_pred CCccchh--hhhHH------------HHHHHHHHhcCCEEEEeCHHHHHH-------h-----------------hccCC
Confidence 7533211 00000 013556789999999999876310 0 11126
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~ 598 (806)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 789999999998755432 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 003636 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (806)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~f 678 (806)
+..++++|+|+|++.. ...+.++++++++.++|.+.|. .+++..+++. +|++++||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8889999999999877 5567778889999999999993 4688999995 9999999999999
Q ss_pred cHHHHHHHHcCCCEEEcCCc-CcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003636 679 GLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (806)
Q Consensus 679 GltvlEAMa~GlPVVAt~~G-G~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 757 (806)
|++++|||+||+|||+|+.+ +..+++.++.+|++++++|+++++++|.+++ +||+.+++|++++++.+ ++|||+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999865 5677887888999999999999999997654 89999999999997655 889999
Q ss_pred HHHHHHH
Q 003636 758 IYSERLM 764 (806)
Q Consensus 758 ~~a~~ll 764 (806)
.++++|.
T Consensus 341 ~~~~~~~ 347 (348)
T cd03820 341 NIIKQWE 347 (348)
T ss_pred HHHHHhc
Confidence 9998875
No 51
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=4.1e-32 Score=292.40 Aligned_cols=356 Identities=17% Similarity=0.238 Sum_probs=258.0
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++++.. .||.+.++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57777764 378888888 67777889999999 8876532211 0111
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-HcCCcEEEEec
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAH 438 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~-~lgvp~v~t~H 438 (806)
.++.++.+|..... .+ .+..+. ....+.+.+. ..+||+||++...+...+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~~-~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDLK-ALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHHH-HHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 24566666654310 11 111111 1122333333 45899999998777777777776 34566777888
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
+........ ...+. .....++..++.+|.+++.|....+... ...+.+ ..
T Consensus 113 ~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~d~ii~~s~~~~~~~~-------------------~~~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLKRR---------LYLLLERLALRFTDKVIFQNEDDRDLAL-------------------KLGIIK-KK 162 (359)
T ss_pred Ccchhhccc-hhHHH---------HHHHHHHHHHhhccEEEEcCHHHHHHHH-------------------HhcCCC-cC
Confidence 754322111 10110 0112355678899999999988765211 111111 13
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~ 598 (806)
.++.+++||+|.+.+.+.... .+++++.|+++|++.+.||++.+++++.++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 577788999998776543210 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH-HHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCC
Q 003636 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE-LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (806)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~-li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~ 677 (806)
+.+++++|+|+|++... ..... .+.+.+..++|.|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE------------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCcc------------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 87889999999999761 11111 3666778889999994 4578888885 999999999999
Q ss_pred CcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003636 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWK 757 (806)
Q Consensus 678 fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 757 (806)
||++++|||+||+|||+|+.|+..|++.++.+|++++++|+++++++|.++ ..|++.+.++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l----~~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERL----IEDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 999999999999999999999999999999999999999999999999664 4899999999999999999999999
Q ss_pred HHHHHHH
Q 003636 758 IYSERLM 764 (806)
Q Consensus 758 ~~a~~ll 764 (806)
.++++++
T Consensus 352 ~~~~~~~ 358 (359)
T cd03808 352 IVVKKLL 358 (359)
T ss_pred HHHHHhh
Confidence 9999876
No 52
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.3e-32 Score=300.00 Aligned_cols=364 Identities=20% Similarity=0.224 Sum_probs=256.3
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++++.+..++ ..||.+.|+. +|+++|++.|++|+ +++............ ..
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hh--
Confidence 578887766521 5799999999 77777899999998 776653221110000 00
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (806)
.... .... .....+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 54 -~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---cccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 0000 001111111111111111222 35899999998876443 6679999999998
Q ss_pred CCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCC
Q 003636 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (806)
Q Consensus 440 l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~ 519 (806)
+.....+.....+. ...........++.+|.++++|....+.+.+. .++ ...
T Consensus 113 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~--~~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPGF-------RRYFRRLLRRALRRADAIITVSEATKRDLLRY-------------------LGV--PPD 164 (365)
T ss_pred chhhhCcccCCHHH-------HHHHHHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------hCc--CHH
Confidence 75544332211110 00111235567999999999998766522111 122 256
Q ss_pred cEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhc
Q 003636 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (806)
Q Consensus 520 k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~ 599 (806)
++.++|||+|...+.+..... +.. ... ..++++|+++||+.+.||++.+++++.++.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~~~-------------------~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-VLR-------------------ALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-HHH-------------------Hhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998876654332 100 111 4577899999999999999999999999998
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCc
Q 003636 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (806)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fG 679 (806)
..++++|+++|.+... .....+.+++.++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 8778999999987651 112222336678899999999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003636 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIY 759 (806)
Q Consensus 680 ltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~ 759 (806)
++++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.++ ++|++.+.++++++++.+ ++|||+..
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l----~~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERL----LEDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHH----hcCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 479999999999999999665 489999999999999665 88999999
Q ss_pred HHHHH
Q 003636 760 SERLM 764 (806)
Q Consensus 760 a~~ll 764 (806)
+++++
T Consensus 360 ~~~~~ 364 (365)
T cd03809 360 ARRTL 364 (365)
T ss_pred HHHHh
Confidence 99886
No 53
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=2e-32 Score=309.30 Aligned_cols=278 Identities=16% Similarity=0.110 Sum_probs=193.3
Q ss_pred CCCceEEEEcCCCc---hHHHH------HHHHHcCCcEEEEecCCCccc----CCCChhhHhhhhh---h---h-----h
Q 003636 405 QGFPDFIIGNYSDG---NLVAS------LLAYKMGITQCTIAHALEKTK----YPDSDIYWKKFDE---K---Y-----H 460 (806)
Q Consensus 405 ~~kPDlIh~h~~~~---~lva~------lla~~lgvp~v~t~H~l~~~k----~~~s~~~~~~l~~---~---y-----~ 460 (806)
..+|||||.|...+ ++... +..+..++|+|.|.|+.+... |...-..|+.-.. . | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 55899999998776 33211 112345799999999987442 1111011110000 0 0 0
Q ss_pred -----chhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCC
Q 003636 461 -----FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 535 (806)
Q Consensus 461 -----~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p 535 (806)
|......-....+.++.+|++|...++... ..++ ..++.+||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~---------------------~~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFN---------------------SLYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHH---------------------HHcC--CCCEEEeCCCcCcccccc
Confidence 011111111234557899999988665211 1122 468999999999754433
Q ss_pred CchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecC--CcCCCHHHHHHHHHHhhccCCCeEEEEEeCcC
Q 003636 536 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL--DHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 613 (806)
Q Consensus 536 ~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL--~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~ 613 (806)
..+... .. .++++++|+++|+. .+.||++.|++|+.++. ++++|+|+|+|+
T Consensus 229 ~~~~~~----------------------~~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPP----------------------VR--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred cccccc----------------------cc--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 221100 00 03467889999994 46899999999999863 579999999875
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEE
Q 003636 614 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 693 (806)
Q Consensus 614 ~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVV 693 (806)
. . ...+|.++|... +..++..+|+ ++|+||+||.+|+||++++||||||+|||
T Consensus 282 ~------------~-----------~~~~v~~~g~~~---~~~~l~~~y~-~aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 P------------F-----------TAGNVVNHGFET---DKRKLMSALN-QMDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred c------------c-----------cccceEEecCcC---CHHHHHHHHH-hCCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 4 0 024688888543 4578889999 49999999999999999999999999999
Q ss_pred EcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK----ISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 694 At~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~----ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
+|+.||.+|++.++ +|++++|+|++++|+++ +++..++ +.+++++++.++|||+.++++|+++|+.
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 99999999999775 99999999999999754 4444443 3456889998999999999999999963
No 54
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=1.7e-31 Score=288.54 Aligned_cols=284 Identities=26% Similarity=0.418 Sum_probs=232.5
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCH
Q 003636 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (806)
Q Consensus 405 ~~kPDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 483 (806)
..+||+||+|+... ...+..+++..++|++.+.|+.......... .........++.+|.+++.|.
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 56999999997654 5667777888899999999986543322111 011224457889999999998
Q ss_pred HHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccc
Q 003636 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (806)
Q Consensus 484 ~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (806)
...+..++ .+ .+..++.++|||+|...+.+...... . .
T Consensus 158 ~~~~~~~~--------------------~~--~~~~~~~~i~~~~~~~~~~~~~~~~~--~------------------~ 195 (377)
T cd03798 158 ALADELKA--------------------LG--IDPEKVTVIPNGVDTERFSPADRAEA--R------------------K 195 (377)
T ss_pred HHHHHHHH--------------------hc--CCCCceEEcCCCcCcccCCCcchHHH--H------------------h
Confidence 87652111 11 23679999999999988876543221 0 0
Q ss_pred cCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003636 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (806)
Q Consensus 564 ~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V 643 (806)
.+. ..+++.++++|++.+.||++.+++++.++.+..++++|+|+|.+.. ...+.+.++++++.++|
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~------------~~~~~~~~~~~~~~~~v 261 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL------------REALEALAAELGLEDRV 261 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc------------hHHHHHHHHhcCCcceE
Confidence 122 4577899999999999999999999999988788999999999876 45677888888999999
Q ss_pred EEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHH
Q 003636 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAE 723 (806)
Q Consensus 644 ~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~ 723 (806)
.+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|++++++|++++++
T Consensus 262 ~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 336 (377)
T cd03798 262 TFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAE 336 (377)
T ss_pred EEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHH
Confidence 9999 6778999999995 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 724 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 724 aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
+|.+++ +++.. +++.++++.+.++|||+..++++.+++.
T Consensus 337 ~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 337 AILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HHHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 997655 77776 7888999999999999999999999875
No 55
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.5e-32 Score=309.16 Aligned_cols=395 Identities=17% Similarity=0.214 Sum_probs=257.6
Q ss_pred cCCCCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCccccc
Q 003636 273 GRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR 352 (806)
Q Consensus 273 ~~~p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~ 352 (806)
++....++|+++.|+.- ..||.+..+.+-+++| .++|+++. |.|+|...+. .. .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~-~~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDA-SP---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCC-CH---HHH
Confidence 45555678988876542 3469999999666654 77788543 3378865321 11 111
Q ss_pred ceeecCCCceEE------EEecCCCcccccccccccCCchhhHHHHHH---HHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 003636 353 LERVSGTEHTHI------LRVPFRSEKGILRQWISRFDVWPYLETFTE---DVGSEITAELQGFPDFIIGNYSDGNLVAS 423 (806)
Q Consensus 353 ~e~i~g~~~v~I------lrvp~~~~~~~~~~~isr~~i~~yl~~f~~---~~~~~i~~~~~~kPDlIh~h~~~~~lva~ 423 (806)
+......-++++ +++. .++|+.+ ..|+++..+.+ .+...+.......||+++-....+.. .
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-------~~~~~~~-~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~--~ 153 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-------KRKWIEE-ETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFT--Y 153 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-------ccccccc-ccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccH--H
Confidence 111111122222 1111 1245543 45555322222 22222222212356655433222211 1
Q ss_pred HHHHHcCCcEEEEecCCCccc------------CCC----ChhhH-hhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHH
Q 003636 424 LLAYKMGITQCTIAHALEKTK------------YPD----SDIYW-KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (806)
Q Consensus 424 lla~~lgvp~v~t~H~l~~~k------------~~~----s~~~~-~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (806)
.+++..++|++..+|-..... |.. ....+ ......|+... -..+..+.+.||.|+++|....
T Consensus 154 pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~-~~l~~~~~~~ad~ii~nS~~t~ 232 (463)
T PLN02949 154 PLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAF-AWMYGLVGRCAHLAMVNSSWTK 232 (463)
T ss_pred HHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHH-HHHHHHHcCCCCEEEECCHHHH
Confidence 233455899999999431110 000 00000 01111111111 1135567789999999998866
Q ss_pred hhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCC
Q 003636 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (806)
Q Consensus 487 ~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~ 566 (806)
+..++. .+. +.++.+|+||+|.+.+.+.+..
T Consensus 233 ~~l~~~-------------------~~~---~~~i~vvyp~vd~~~~~~~~~~--------------------------- 263 (463)
T PLN02949 233 SHIEAL-------------------WRI---PERIKRVYPPCDTSGLQALPLE--------------------------- 263 (463)
T ss_pred HHHHHH-------------------cCC---CCCeEEEcCCCCHHHcccCCcc---------------------------
Confidence 522211 011 3578899999997655321100
Q ss_pred CCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhc----cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003636 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (806)
Q Consensus 567 l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~----~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~ 642 (806)
.+++++.++++||+.+.||++.+++|++++.+ ..++++|+|+|+++. .++.++.++++++++++++.++
T Consensus 264 -~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 264 -RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred -ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCc
Confidence 02356789999999999999999999998754 347899999999854 1223456788999999999999
Q ss_pred EEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcc-ccccc---CCcEEEECCCCH
Q 003636 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH---GASGFHIDPYHP 718 (806)
Q Consensus 643 V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~-EiI~d---g~~G~li~p~d~ 718 (806)
|.|+| .++.+++..+|+. +|++|+|+..|+||++++|||+||+|||+++.||+. |++.+ |.+|++++ |+
T Consensus 337 V~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~ 409 (463)
T PLN02949 337 VEFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TV 409 (463)
T ss_pred EEEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CH
Confidence 99999 6778999999995 999999999999999999999999999999999985 77765 67899884 89
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 719 e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
+++|++|.++++ .+++.+++|+++|++++ ++|||+.+++++.+.+..
T Consensus 410 ~~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 410 EEYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 999999977652 36888999999999998 679999999999998763
No 56
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=4.8e-32 Score=307.78 Aligned_cols=368 Identities=17% Similarity=0.215 Sum_probs=242.2
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHC--CCceeeceeEEeccCCCCCCCcc---cccceeecCCCceEEEEec-CCCccc
Q 003636 301 TGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTC---NQRLERVSGTEHTHILRVP-FRSEKG 374 (806)
Q Consensus 301 tGG~~vyvl~~~raL~~eLa~~L~~~--G~eV~~~ilVvT~~~~~~~g~~~---~~~~e~i~g~~~v~Ilrvp-~~~~~~ 374 (806)
.||.++.+.+-+++| .++ ||+|+ |+|........... .... .+....+..++++. .+
T Consensus 13 ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f-~~~~~~~~~~~~~~~~~---- 75 (419)
T cd03806 13 GGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRF-NIELDRPRIVFFLLKYR---- 75 (419)
T ss_pred CCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhc-CeecCCCceEEEEecce----
Confidence 469999999666665 555 88888 99987543210000 0011 11111234444442 11
Q ss_pred ccccccccCCchhhH---HHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCCh-
Q 003636 375 ILRQWISRFDVWPYL---ETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSD- 449 (806)
Q Consensus 375 ~~~~~isr~~i~~yl---~~f~~~~~~~i~~~~~~kPDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~- 449 (806)
.|+++ ..|+.+ -.+...+...+......+||||+.+...+ .+.. +....++|++..+| ++..-.+.-
T Consensus 76 ---~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~--~~~~~~~~~i~y~h--~P~~~~d~l~ 147 (419)
T cd03806 76 ---KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPL--VRLLGGCPVGAYVH--YPTISTDMLQ 147 (419)
T ss_pred ---eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHH--HHHhcCCeEEEEec--CCcchHHHHH
Confidence 12222 223321 23333333333333244899998886433 2221 12224789999999 221000000
Q ss_pred -hhH-------------hh---hhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeec
Q 003636 450 -IYW-------------KK---FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVH 512 (806)
Q Consensus 450 -~~~-------------~~---l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~ 512 (806)
... +. ..+...+......+...++.||.|+++|....+..++. .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~-------------------~ 208 (419)
T cd03806 148 KVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSL-------------------W 208 (419)
T ss_pred HHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHH-------------------h
Confidence 000 00 00000001111257788999999999998766522111 0
Q ss_pred cCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHH
Q 003636 513 GIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 592 (806)
Q Consensus 513 Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Lle 592 (806)
+. ..++.+|+||+|.+.|.+.... ...++++|+|+||+.+.||++.+++
T Consensus 209 ~~---~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~il~vgr~~~~K~~~~li~ 257 (419)
T cd03806 209 KR---NTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQILSIAQFRPEKNHPLQLR 257 (419)
T ss_pred Cc---CCCcEEEcCCCCHHHhcccccc----------------------------cccCCcEEEEEEeecCCCCHHHHHH
Confidence 11 2488999999998776543210 0245679999999999999999999
Q ss_pred HHHHhhccCC-----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCc
Q 003636 593 CYGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 667 (806)
Q Consensus 593 a~~~l~~~~~-----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaD 667 (806)
|++++.+..+ +++|+|+|++.. .++.++.+.++++++++++.++|.|+| .++.+++..+|+. +|
T Consensus 258 A~~~l~~~~~~~~~~~~~lvivG~~~~------~~~~~~~~~L~~~~~~l~l~~~V~f~g----~v~~~~l~~~l~~-ad 326 (419)
T cd03806 258 AFAKLLKRLPEEIKEKIKLVLIGSCRN------EDDEKRVEDLKLLAKELGLEDKVEFVV----NAPFEELLEELST-AS 326 (419)
T ss_pred HHHHHHHhCcccccCceEEEEEcCCCC------cccHHHHHHHHHHHHHhCCCCeEEEec----CCCHHHHHHHHHh-Ce
Confidence 9999987655 499999999865 122345678899999999999999999 7788999999995 99
Q ss_pred EEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcc-cccc---cCCcEEEECCCCHHHHHHHHHHHHHhhcCCH-HHHHHH
Q 003636 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIE---HGASGFHIDPYHPDQAAELMADFFGKCKENP-SHWKKI 742 (806)
Q Consensus 668 ifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~-EiI~---dg~~G~li~p~d~e~la~aI~~~l~~l~~dp-~~~~~m 742 (806)
++|+|+..|+||++++|||+||+|||+++.||+. |++. +|.+|++++ |++++|++|.+++ +++ +.++.+
T Consensus 327 v~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll----~~~~~~~~~~ 400 (419)
T cd03806 327 IGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL----SLSEEERLRI 400 (419)
T ss_pred EEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH----hCCHHHHHHH
Confidence 9999999999999999999999999999998864 6777 899999984 9999999997765 544 455555
Q ss_pred HHHHHHHHHHhCCHHHHHH
Q 003636 743 SDGGLKRIYERYTWKIYSE 761 (806)
Q Consensus 743 s~~ar~~v~~~ysw~~~a~ 761 (806)
.++++.+.++|||+.+.+
T Consensus 401 -~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 401 -RRAARSSVKRFSDEEFER 418 (419)
T ss_pred -HHHHHHHHHhhCHHHhcc
Confidence 555556779999998754
No 57
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=6.7e-32 Score=292.80 Aligned_cols=353 Identities=16% Similarity=0.204 Sum_probs=246.2
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||++++++..+ ..+||.+.++. .|+++|+++||+|+ +++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68899877653 24689999999 66667789999999 887653322111000
Q ss_pred CceEEEEecC--CCcccccccccccCCchhhH-HHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003636 360 EHTHILRVPF--RSEKGILRQWISRFDVWPYL-ETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (806)
Q Consensus 360 ~~v~Ilrvp~--~~~~~~~~~~isr~~i~~yl-~~f~~~~~~~i~~~~~~kPDlIh~h~~~~-~lva~lla~~lgvp~v~ 435 (806)
.+..+...+. ........ .......+. ..+...+.+.+. ..+||+||+|.+.. +......++..++|+++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALPR---DLFHLSDYDNPAVVAEFARLLE---DFRPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCchh---hhhHHHhccCHHHHHHHHHHHH---HcCCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111110 00000000 000000000 112222333333 34899999998754 34445566778999999
Q ss_pred EecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCC
Q 003636 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (806)
Q Consensus 436 t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~ 515 (806)
++|+...... +. .......|.++++|....+...+ .+..
T Consensus 126 ~~hd~~~~~~------~~---------------~~~~~~~d~ii~~s~~~~~~~~~--------------------~~~~ 164 (359)
T cd03823 126 TLHDYWLICP------RQ---------------GLFKKGGDAVIAPSRFLLDRYVA--------------------NGLF 164 (359)
T ss_pred EEeeeeeecc------hh---------------hhhccCCCEEEEeCHHHHHHHHH--------------------cCCC
Confidence 9997533110 00 01122339999999876552110 1222
Q ss_pred CCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHH
Q 003636 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (806)
Q Consensus 516 v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~ 595 (806)
..++.+|+||+|...+.+... +. +.++++|+++||+.+.||++.+++++.
T Consensus 165 --~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~ 214 (359)
T cd03823 165 --AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFK 214 (359)
T ss_pred --ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHH
Confidence 468999999999987654321 01 456788999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC-
Q 003636 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF- 674 (806)
Q Consensus 596 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~- 674 (806)
++.+ ++++|+++|++.. ........ +..++|.++| .++.+++..+++. +|++++||.
T Consensus 215 ~l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~ 272 (359)
T cd03823 215 RLPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIW 272 (359)
T ss_pred HHHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcc
Confidence 9876 7899999999876 11111111 5668899999 6678999999995 999999997
Q ss_pred CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhC
Q 003636 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERY 754 (806)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~y 754 (806)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.++++++++++++.
T Consensus 273 ~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~--- 345 (359)
T cd03823 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRS--- 345 (359)
T ss_pred cCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhh---
Confidence 7999999999999999999999999999999999999999999999999997655 799999999999987763
Q ss_pred CHHHHHHHHHHHHH
Q 003636 755 TWKIYSERLMTLAG 768 (806)
Q Consensus 755 sw~~~a~~ll~ly~ 768 (806)
.+.++++++++|+
T Consensus 346 -~~~~~~~~~~~~~ 358 (359)
T cd03823 346 -IEDQAEEYLKLYR 358 (359)
T ss_pred -HHHHHHHHHHHhh
Confidence 3999999999875
No 58
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.9e-32 Score=308.43 Aligned_cols=284 Identities=14% Similarity=0.149 Sum_probs=205.7
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCCcccCCCCh--hhHhhhhhhhhch--hhhhHHHHHhhhCCEEE
Q 003636 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDSD--IYWKKFDEKYHFS--CQFTADLIAMNNADFII 479 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla-~~lgvp~v~t~H~l~~~k~~~s~--~~~~~l~~~y~~~--~~~~~e~~a~~~AD~II 479 (806)
..++|+||++++..+. .+. +..++|.|++.|+++...+.... ..+ .....|+.. .....|+..++.+|.|+
T Consensus 102 ~~~~D~v~~~~~~~~~---~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~ad~vi 177 (397)
T TIGR03087 102 AEPVDAIVVFSSAMAQ---YVTPHVRGVPRIVDFVDVDSDKWLQYARTKRW-PLRWIYRREGRLLLAYERAIAARFDAAT 177 (397)
T ss_pred hCCCCEEEEeccccce---eccccccCCCeEeehhhHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence 4589999998765422 222 34689999999986432211000 000 000011110 11135777899999999
Q ss_pred ecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccc
Q 003636 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (806)
Q Consensus 480 t~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 559 (806)
++|+.+.+..++. .+. ...++.+||||+|.+.|.|.....
T Consensus 178 ~~S~~~~~~l~~~-------------------~~~--~~~~v~vipngvd~~~f~~~~~~~------------------- 217 (397)
T TIGR03087 178 FVSRAEAELFRRL-------------------APE--AAGRITAFPNGVDADFFSPDRDYP------------------- 217 (397)
T ss_pred EcCHHHHHHHHHh-------------------CCC--CCCCeEEeecccchhhcCCCcccc-------------------
Confidence 9999876622110 111 156899999999999886643210
Q ss_pred cccccCCCCCCCCCEEEEEecCCcCCCHHHHH----HHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003636 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (806)
Q Consensus 560 ~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Ll----ea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (806)
... .+++++|+|+||+++.||++.++ ++++++.+..|+++|+|+|+|+. +.+ +
T Consensus 218 ----~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~~----~ 274 (397)
T TIGR03087 218 ----NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PAV----R 274 (397)
T ss_pred ----CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HHH----H
Confidence 011 24568999999999999999988 56667777779999999999875 112 3
Q ss_pred HcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEEC
Q 003636 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 714 (806)
Q Consensus 636 ~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~-~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~ 714 (806)
+++..++|.|+|.+ + ++..+++. +|++|+||. .|++|++++|||+||+|||+|+.|+. .+...+++|++++
T Consensus 275 ~l~~~~~V~~~G~v----~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~ 346 (397)
T TIGR03087 275 ALAALPGVTVTGSV----A--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA 346 (397)
T ss_pred HhccCCCeEEeeec----C--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC
Confidence 33445679999943 3 57888884 999999997 69999999999999999999987643 3344456799986
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 715 p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
+|+++++++|.+++ +|++.+++|+++|++++.++|||+.+++++.+++.
T Consensus 347 -~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 347 -ADPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred -CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 89999999996654 89999999999999999999999999999999875
No 59
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=1.6e-31 Score=286.62 Aligned_cols=351 Identities=18% Similarity=0.225 Sum_probs=250.3
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCC
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~ 359 (806)
||+++++... .||...++. .|++.|.++||+|. +++............ ...
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLP------SNV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCccccccc------cch
Confidence 5788876542 489999999 67777799999999 877653322111000 000
Q ss_pred CceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEec
Q 003636 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAH 438 (806)
Q Consensus 360 ~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~-~~~lva~lla~~lgvp~v~t~H 438 (806)
........... ....+ .+...+.+.+. ..+||+||++.. ...+.+.+.++. ++|.+++.|
T Consensus 52 ~~~~~~~~~~~-----------~~~~~----~~~~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLK-----------SLRDL----LAILRLRRLLR---KEKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeecc-----------cccch----hHHHHHHHHHH---hcCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 00000000000 00111 11223333333 238999999988 555555554444 899999999
Q ss_pred CCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 439 ~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
+............+ ..+...++.+|.+++.|....+... ...+. ..
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~-------------------~~~~~--~~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLL-------------------KLLGI--PP 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHH-------------------HhhcC--Cc
Confidence 87543321111000 2345678999999999987654211 11112 25
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~ 598 (806)
.++.+||||+|.+.+.+...... ..+. +.++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 78999999999987765433211 0122 467789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCC
Q 003636 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (806)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~f 678 (806)
+..++++|+++|+++. .+.+.+.++++++.++|.|.|.. +++..+++. +|++|+||.+|++
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEeccc------CCHHHHHHh-CCEEEeCcccCCC
Confidence 8888999999999876 45677888999999999999943 357788885 9999999999999
Q ss_pred cHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCC
Q 003636 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYT 755 (806)
Q Consensus 679 GltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ys 755 (806)
|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+..+ ..+..+++.++++++++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999996544433 56778999999999999999988886
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=2.5e-31 Score=307.03 Aligned_cols=280 Identities=19% Similarity=0.222 Sum_probs=211.0
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCC--hhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecC
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS--DIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s--~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S 482 (806)
..++||+|++.+.....+ ++.....+|.+.++|+-........ ...|.. .|.+. ....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~---~y~~~------~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWNN---YYEYQ------FSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHH---HHHHH------HhchhhCCEEEECC
Confidence 458999999776643333 3455668999999997432221111 111221 11111 22367889999999
Q ss_pred HHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccc
Q 003636 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (806)
Q Consensus 483 ~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (806)
....+.+.+..++| +. ..+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~--~~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YN--IEPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cC--CCCcEEEEcCCCcccccCccc-------------------------
Confidence 87655333222222 11 157899999998755443210
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~ 642 (806)
...+..|+++||+.+.||++.|++|++++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 1344689999999999999999999999998889999999999976 5678999999999999
Q ss_pred EEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCc-CcccccccCCcEEEECC----CC
Q 003636 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDP----YH 717 (806)
Q Consensus 643 V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~G-G~~EiI~dg~~G~li~p----~d 717 (806)
|.|+|. .+ +..+++ .+|+||+||.+|+||++++||||||+|||+|+.| |++|+|.+|.+|+++++ +|
T Consensus 378 V~f~G~----~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKGH----RN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcCC----CC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 999993 33 455666 5999999999999999999999999999999986 89999999999999984 33
Q ss_pred ----HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 718 ----PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 718 ----~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
++++|++|.++ ++ ++.+++|+++|++.+ ++|||+.++++|.++++.
T Consensus 450 ~~~~~~~la~~I~~l----l~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 450 EDQIITALAEKIVEY----FN-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVRE 499 (500)
T ss_pred hhHHHHHHHHHHHHH----hC-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 77788888654 34 557999999999976 789999999999998753
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=100.00 E-value=7.7e-31 Score=296.79 Aligned_cols=276 Identities=15% Similarity=0.242 Sum_probs=219.1
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCc-EEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecC
Q 003636 405 QGFPDFIIGNYSDG-NLVASLLAYKMGIT-QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (806)
Q Consensus 405 ~~kPDlIh~h~~~~-~lva~lla~~lgvp-~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S 482 (806)
..++|++|+++... +..+.++.++.+.+ +|.++|+..... ......+ .......++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~-----~~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGY-----IPLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccc-----hHHHHHHHhcCCEEEECC
Confidence 56788999866544 45556677777776 899999753211 0011111 112234588999999999
Q ss_pred HHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccc
Q 003636 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (806)
Q Consensus 483 ~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (806)
....+..++. ++....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~---------------------~~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKR---------------------YPAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHH---------------------CCCccccEEEEECCcccccccCCC-------------------------
Confidence 9876632211 122267899999999987654321
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCC--CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~ 640 (806)
..++++.|+++||+.+.||++.+++|+.++.+.+| +++++++|+|+. .+.+++++++.+..
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 03457789999999999999999999999988776 567788999876 56788888888888
Q ss_pred CcEEEcccccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCC-CH
Q 003636 641 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY-HP 718 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~-aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~-d~ 718 (806)
++|.|+| .++.+++.++++. .+|+||.||.+|+||++++|||+||+|||||+.||..|+|.++++|++++++ |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 9999999 6778899999974 3789999999999999999999999999999999999999999999999874 89
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003636 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLM 764 (806)
Q Consensus 719 e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll 764 (806)
++++++|.+++ +||+.+++|+++|+++++++|||+...+++.
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999997655 7999999999999999999999999988875
No 62
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.98 E-value=1.8e-30 Score=294.58 Aligned_cols=437 Identities=16% Similarity=0.181 Sum_probs=297.0
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceee--
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV-- 356 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i-- 356 (806)
|||+.+|....|- -++||+...+- .|.+.|++.|++|. |+.+.++.... .+....+.+
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~~~~-~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPKVQK-EWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchhhhh-hhccccceeeE
Confidence 7899998887753 57899998888 66777899999999 88888773322 222211111
Q ss_pred ----cC-CCceEEEEecCCCc-cc--cc--ccccccC--Cchhh------HHHHHHHHHHHHHHHcC--CCceEEEEcCC
Q 003636 357 ----SG-TEHTHILRVPFRSE-KG--IL--RQWISRF--DVWPY------LETFTEDVGSEITAELQ--GFPDFIIGNYS 416 (806)
Q Consensus 357 ----~g-~~~v~Ilrvp~~~~-~~--~~--~~~isr~--~i~~y------l~~f~~~~~~~i~~~~~--~kPDlIh~h~~ 416 (806)
.+ .....+........ .+ ++ ....+|. ..+.| +..|...+...+ .... ..|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~-~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELA-PLGLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHh-hhcCCCCCCCEEEeecH
Confidence 00 01111111111000 01 11 1112221 12222 223333333332 2212 37999999999
Q ss_pred CchHHHHHHHHH----cCCcEEEEecCCCcccCCC-ChhhHhhhh-hhhh-----chhhhhHHHHHhhhCCEEEecCHHH
Q 003636 417 DGNLVASLLAYK----MGITQCTIAHALEKTKYPD-SDIYWKKFD-EKYH-----FSCQFTADLIAMNNADFIITSTYQE 485 (806)
Q Consensus 417 ~~~lva~lla~~----lgvp~v~t~H~l~~~k~~~-s~~~~~~l~-~~y~-----~~~~~~~e~~a~~~AD~IIt~S~~~ 485 (806)
.+++++.+++.. ..+|.|+|+|++..+.... .-..+-.+. ..|+ +..+....+..+..||.|+|+|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999999884 4799999999986544322 111111111 1111 1122334566788999999999987
Q ss_pred HhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccC
Q 003636 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (806)
Q Consensus 486 ~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g 565 (806)
+.... -...+..+.++.+.. ..++.-|-||+|.+.+.|.++......--.+....+..++..+.+++|
T Consensus 220 a~Ei~------t~~~g~gl~g~l~~~------~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g 287 (487)
T COG0297 220 AGEIY------TPEYGEGLEGLLSWR------SGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG 287 (487)
T ss_pred HHhhc------cccccccchhhhhhc------cccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC
Confidence 66322 111122333333221 368899999999999999876533211111222235556777888999
Q ss_pred CCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003636 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (806)
Q Consensus 566 ~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~f 645 (806)
+..+.+.|++.++|||+.+||++.+++++..+.+.. ++++|.|.|.. .....+..+++++.. ++..
T Consensus 288 L~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~ 353 (487)
T COG0297 288 LDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLV 353 (487)
T ss_pred CCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEE
Confidence 976678899999999999999999999999998764 99999999933 456778888888753 4444
Q ss_pred cccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccccccc--------CCcEEEECCCC
Q 003636 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--------GASGFHIDPYH 717 (806)
Q Consensus 646 lG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d--------g~~G~li~p~d 717 (806)
.- .. ++.+.+.+...+|++++||++|+||++-++||..|+++|+..+||.++.|.+ ..+|+++.+.|
T Consensus 354 ~i----~~-~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~ 428 (487)
T COG0297 354 VI----GY-DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN 428 (487)
T ss_pred Ee----ee-cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC
Confidence 33 22 3455555555799999999999999999999999999999999999999976 57999999999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 718 ~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
+++++.+|.+.+......+..|+.+..+++. ..|+|+..+++|.++|+..
T Consensus 429 ~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 429 PDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 9999999999886555566669999999986 6899999999999999865
No 63
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=2e-29 Score=281.74 Aligned_cols=318 Identities=13% Similarity=0.049 Sum_probs=213.1
Q ss_pred HHHHHHHHCCC-ceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCcccccccccccCCchh---hHHHH-
Q 003636 318 EMLLRIKRQGL-DISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP---YLETF- 392 (806)
Q Consensus 318 eLa~~L~~~G~-eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~---yl~~f- 392 (806)
.++.+++++|+ +|+ ++|...+ +. ........+++|+++|. +... . -+. .++. |+...
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~---~~-----~~~~~~~~~v~v~r~~~-~~~~--~-~~~--~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGS---EP-----IPALLNHPSIHIHLMVQ-PRLL--Q-RLP--RVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCC---CC-----CHHHhcCCcEEEEECCC-cccc--c-ccc--cchHHHHHHHHHH
Confidence 35666788886 798 7764321 11 11112234689999975 2110 0 011 1222 33221
Q ss_pred --HHHHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhH
Q 003636 393 --TEDVGSEITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTA 467 (806)
Q Consensus 393 --~~~~~~~i~~~~~~kPDlIh~h~~~~---~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~ 467 (806)
...+...+.. ...+||+||+|.+.. ...+.++++..++|++++.|+++........ ... .....+. ...
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~-~~~--~~~~~~~--~~~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSL-GRS--HPLVRLY--RWY 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhccc-CCC--CHHHHHH--HHH
Confidence 1122222211 256999999987553 4566777888899999999986421100000 000 0001111 124
Q ss_pred HHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhh
Q 003636 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (806)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~ 547 (806)
++..++.||.||++|....+...+ ..|+ ++.+|+||+ .+.|.|......
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~-------------------~~g~-----~i~vi~n~~-~~~f~~~~~~~~------ 207 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQ-------------------NWGI-----RATVLYDQP-PEFFRPASLEIR------ 207 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHH-------------------hcCC-----CeEEECCCC-HHHcCcCCchhc------
Confidence 677899999999999987652110 0122 278999995 466655432100
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh-----------------ccCCCeEEEEEe
Q 003636 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-----------------QLRELVNLVVVA 610 (806)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~-----------------~~~~~v~LvIVG 610 (806)
.. .+.+.+++++||+.+.||++.+++|+..+. +..|+++|+|+|
T Consensus 208 ----------------~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG 268 (371)
T PLN02275 208 ----------------LR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITG 268 (371)
T ss_pred ----------------cc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEe
Confidence 00 233457889999999999999999998874 235789999999
Q ss_pred CcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECC---CCCCCcHHHHHHHH
Q 003636 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA---FYEAFGLTVVEAMT 687 (806)
Q Consensus 611 ~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS---~~E~fGltvlEAMa 687 (806)
+|+. .++++++++++++.+ +.|.+. .++.+++..+|+ ++|+||.|+ ..|+||++++||||
T Consensus 269 ~G~~------------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~-~aDv~v~~~~s~~~e~~p~~llEAmA 331 (371)
T PLN02275 269 KGPQ------------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLG-SADLGVSLHTSSSGLDLPMKVVDMFG 331 (371)
T ss_pred CCCC------------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHH-hCCEEEEeccccccccccHHHHHHHH
Confidence 9988 678899999999976 887651 457899999999 499999863 24899999999999
Q ss_pred cCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHH
Q 003636 688 CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (806)
Q Consensus 688 ~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~ 728 (806)
||+|||+|+.||..|+|+++.+|++++ |+++++++|.++
T Consensus 332 ~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 332 CGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 999999999999999999999999996 699999998654
No 64
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=1.4e-29 Score=279.23 Aligned_cols=264 Identities=20% Similarity=0.252 Sum_probs=190.5
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChh------hHhhhhhhhhchhhhhHHHHHhhhCCEE
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDI------YWKKFDEKYHFSCQFTADLIAMNNADFI 478 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~------~~~~l~~~y~~~~~~~~e~~a~~~AD~I 478 (806)
..++|+||++.+.... .+.+..++|.+..+|+.....+...+. .+......+........+..+++.+|.|
T Consensus 81 ~~~~D~v~~~~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAVAK---GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHHhc---cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 4689999987643221 222456788888888732211111000 0000000001111112355678999999
Q ss_pred EecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcc
Q 003636 479 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558 (806)
Q Consensus 479 It~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~ 558 (806)
+++|...++..+ ++ . ..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~----~~-----------------~---~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIK----KY-----------------Y---GRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHH----HH-----------------h---CCCcEEECCCCCHhhcCcCC---------------------
Confidence 999998765211 10 1 34567999999987765431
Q ss_pred ccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003636 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (806)
Q Consensus 559 ~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 638 (806)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457999999999999999999998873 78999999876 233333 4
Q ss_pred CCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCH
Q 003636 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (806)
Q Consensus 639 l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~ 718 (806)
..++|.|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568899999 6788999999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003636 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 763 (806)
Q Consensus 719 e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~l 763 (806)
++++++|.+++ +|++ .+.+++++++ ++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 99999997655 6763 2334444454 579999998875
No 65
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=6.3e-29 Score=275.96 Aligned_cols=273 Identities=21% Similarity=0.281 Sum_probs=211.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCC-hhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHH
Q 003636 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (806)
Q Consensus 406 ~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s-~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 484 (806)
.++|+||++....... .++......+.+.++|+......... ...|+. .+.. ....++.+|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~~------~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYEY------VFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhHH------HHhChhhCCEEEEccHH
Confidence 6899999988765433 23334445667888997432221110 011111 1111 11236789999999988
Q ss_pred HHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccccc
Q 003636 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (806)
Q Consensus 485 ~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (806)
.++...+. + +. ..++.+||||++...+.+....
T Consensus 168 ~~~~l~~~---~----------------~~---~~~v~~ip~g~~~~~~~~~~~~------------------------- 200 (372)
T cd04949 168 QKQDLQKQ---F----------------GN---YNPIYTIPVGSIDPLKLPAQFK------------------------- 200 (372)
T ss_pred HHHHHHHH---h----------------CC---CCceEEEcccccChhhcccchh-------------------------
Confidence 76532111 1 11 3358899999998776553200
Q ss_pred CCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003636 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (806)
Q Consensus 565 g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~ 644 (806)
...+..|+++||+.+.||++.+++++.++.+..|+++|+|+|.|.. ...+.+.++++++.++|.
T Consensus 201 ----~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 201 ----QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ----hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 2456789999999999999999999999998889999999999976 456777788899999999
Q ss_pred EcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCc-CcccccccCCcEEEECCCCHHHHHH
Q 003636 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAE 723 (806)
Q Consensus 645 flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~G-G~~EiI~dg~~G~li~p~d~e~la~ 723 (806)
|.|+. .++.++++. +|++|.||.+|+||++++|||+||+|||+++.| |+.+++.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99932 367888885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003636 724 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERL 763 (806)
Q Consensus 724 aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~l 763 (806)
+|.+++ +|++.+++|+++|++.+ ++|||+.++++|
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 997655 89999999999999994 899999998864
No 66
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=3.7e-28 Score=278.90 Aligned_cols=279 Identities=11% Similarity=0.110 Sum_probs=198.9
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHH--HHHHHHHcCCcEEEEecCCCcccCCCChh-hHhhhhhhhhchhhhhHHHH
Q 003636 395 DVGSEITAELQGFPDFIIGNYSDG-NLV--ASLLAYKMGITQCTIAHALEKTKYPDSDI-YWKKFDEKYHFSCQFTADLI 470 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~~-~lv--a~lla~~lgvp~v~t~H~l~~~k~~~s~~-~~~~l~~~y~~~~~~~~e~~ 470 (806)
++.+.+. ...|||||.+.+.. ++. |..+|++++ |+|.++|+........... ....+ ..+ ....
T Consensus 425 dI~~~L~---~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~~g~L~~~------llk-~l~~- 492 (794)
T PLN02501 425 DTSQFIP---SKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGALQAF------FVK-HINN- 492 (794)
T ss_pred HHHHHhh---ccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhcchhHHHH------HHH-HHHH-
Confidence 3444444 34899999999875 666 888999999 9999999865421111100 00100 000 0011
Q ss_pred Hhhh--CCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhc
Q 003636 471 AMNN--ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHG 548 (806)
Q Consensus 471 a~~~--AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~ 548 (806)
.+.. +|.|+++|..... ++ ...+.. .||||++.|.|......+
T Consensus 493 ~v~r~hcD~VIaPS~atq~--------------------------L~--~~vI~n-VnGVDte~F~P~~r~~~~------ 537 (794)
T PLN02501 493 WVTRAYCHKVLRLSAATQD--------------------------LP--KSVICN-VHGVNPKFLKIGEKVAEE------ 537 (794)
T ss_pred HHHHhhCCEEEcCCHHHHH--------------------------hc--ccceee-cccccccccCCcchhHHH------
Confidence 1222 8999999965432 00 111222 269999999886553322
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHH
Q 003636 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628 (806)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~ 628 (806)
..+|. +...+.++|+|||.+.||++.|++|++++.+..++++|+|||+|+. .+
T Consensus 538 -------------r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------re 590 (794)
T PLN02501 538 -------------RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AH 590 (794)
T ss_pred -------------HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HH
Confidence 11343 2233458999999999999999999999887778999999999998 66
Q ss_pred HHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCC
Q 003636 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA 708 (806)
Q Consensus 629 ~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~ 708 (806)
.+++++.++++ +|.|+|.+. +...+|+ ++|+||+||.+|+||++++||||||+|||+|+.||. +++.++.
T Consensus 591 eLe~la~eLgL--~V~FLG~~d------d~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~ 660 (794)
T PLN02501 591 EVQRAAKRLDL--NLNFLKGRD------HADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFP 660 (794)
T ss_pred HHHHHHHHcCC--EEEecCCCC------CHHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecC
Confidence 78888988887 499999432 2345777 599999999999999999999999999999999985 4477888
Q ss_pred cEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 709 ~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
+|+++ +|+++++++|.+++ .|+..+..+.+ ...|||+..++++++....
T Consensus 661 nGll~--~D~EafAeAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 661 NCLTY--KTSEDFVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred CeEec--CCHHHHHHHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 88865 68999999997766 56554433321 2489999999999997654
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.97 E-value=8.3e-29 Score=272.53 Aligned_cols=258 Identities=13% Similarity=0.112 Sum_probs=189.3
Q ss_pred EcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHH-hhhCCEEEecCHHHHhhccc
Q 003636 413 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA-MNNADFIITSTYQEIAGTKN 491 (806)
Q Consensus 413 ~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a-~~~AD~IIt~S~~~~~~~k~ 491 (806)
.|+....+.++....+.|+|+++++|+... +. . ..+... .+.+|.||++|....+...
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~-------l~-~------------~~~~~~~~~~ad~ii~~S~~~~~~l~- 110 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA-------IS-H------------TALYFFRNQPVDEIVVPSQWSKNAFY- 110 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech-------hh-H------------HHHHHHhhccCCEEEECCHHHHHHHH-
Confidence 444444455555556778999999997210 00 0 112334 6789999999998765211
Q ss_pred ccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCC
Q 003636 492 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 571 (806)
Q Consensus 492 ~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~ 571 (806)
..|++. +.++.+||||+|.+.|.|.... ..+
T Consensus 111 -------------------~~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 111 -------------------TSGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred -------------------HcCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 123321 3589999999999888654210 124
Q ss_pred CCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003636 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (806)
Q Consensus 572 k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~ 651 (806)
+.+++++|++.+.||++.|++|++++.+..++++++|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 5577788899999999999999999988788999999997654 1111 12222 233
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECC----------------
Q 003636 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP---------------- 715 (806)
Q Consensus 652 ~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p---------------- 715 (806)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|++.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 5678999999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHhhcCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 716 ---YHPDQAAELMADFFGKCKEN--PSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 716 ---~d~e~la~aI~~~l~~l~~d--p~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
.|.+++++++.+++ .| ++.++++..++...+.++|||+.++++++++|+.|
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 26788888886655 44 24444445555555679999999999999999754
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=9.1e-27 Score=265.47 Aligned_cols=329 Identities=16% Similarity=0.158 Sum_probs=205.9
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCCcccCCC---Chhh-------HhhhhhhhhchhhhhHHHHHhh
Q 003636 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPD---SDIY-------WKKFDEKYHFSCQFTADLIAMN 473 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla-~~lgvp~v~t~H~l~~~k~~~---s~~~-------~~~l~~~y~~~~~~~~e~~a~~ 473 (806)
..++||+|+|.|.++..+..++ +..++|+|+|.|+....++.. .+++ +..-...+....+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999998888887 557899999999977666411 1122 1111112223334456888999
Q ss_pred hCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhh
Q 003636 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 553 (806)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~ 553 (806)
.||.+||+|.......+.. .|.+ +.+ |||||+|.+.|.+..+..+....-+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~L-------------------l~~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHL-------------------LKRK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHH-------------------hCCC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 9999999999876643221 1222 444 9999999999977653322111111222221
Q ss_pred ccCccccccccCCCCCCCCCEEEE-EecCCc-CCCHHHHHHHHHHhhc----cCCC---eEEEEEeCcCCCCCCcchHH-
Q 003636 554 LFDPEQNDEHVGTLSDRSKPIVFS-MARLDH-VKNMTGLVECYGKNSQ----LREL---VNLVVVAGYIDVNKSKDREE- 623 (806)
Q Consensus 554 l~~~~~~~~~~g~l~~~~k~iI~~-vGRL~~-~Kgi~~Llea~~~l~~----~~~~---v~LvIVG~g~~~~~~~d~ee- 623 (806)
. ....+.++++ ++++++++| +||++. .||++.+++|++++.. ...+ +-|+|+-.+.. +.+.+.
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 1123455665 667777776 899998 9999999999999864 1222 34454443311 000000
Q ss_pred --HHHH-------------------------------------------------------------------HHHHHHH
Q 003636 624 --IAEI-------------------------------------------------------------------EKMHELM 634 (806)
Q Consensus 624 --~~~~-------------------------------------------------------------------~~l~~li 634 (806)
.+.. +.+-..+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 0000 0111122
Q ss_pred HHcCCC----Cc--EEEccc---ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCc----c
Q 003636 635 KTYKLD----GQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----A 701 (806)
Q Consensus 635 ~~~~l~----~~--V~flG~---~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~----~ 701 (806)
++.+|. ++ |.|... .++.+-..+.+++++ +||+||+||.+|+||++++|||+||+|||+|+.+|+ .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 222232 22 333321 122333445777777 599999999999999999999999999999999998 5
Q ss_pred cccccC-CcEEEECC-------CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 003636 702 EIIEHG-ASGFHIDP-------YHPDQAAELMADFFGKCKENPSHWKKISDGGL-KRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 702 EiI~dg-~~G~li~p-------~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar-~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
|++.++ ..|+.+.+ .+.++++++|.++ .+. +.++.+.++++ ++..+.|+|+..++.|.+.|..
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~----~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEF----CQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHH----hCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 666555 35777763 3345555555444 333 46666666654 3445889999999999998864
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=2.1e-25 Score=247.35 Aligned_cols=343 Identities=13% Similarity=0.108 Sum_probs=234.3
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecC
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g 358 (806)
|||++++.. +||.+.... +|++.|.++||+|+ ++|..... . ....+.
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVPK--- 48 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhcccc---
Confidence 898887532 267777777 67778899999999 88864210 0 001111
Q ss_pred CCceEEEEecCCCcccccccccccCC-chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003636 359 TEHTHILRVPFRSEKGILRQWISRFD-VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (806)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~-i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~ 437 (806)
.++++++++.....+. ...++.. .+.++ .....+.+.++ +.+||+||+|.+.+++.+.++++..++|++++.
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~-~~~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLL-KGVLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHH-HHHHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 2567777765432110 0000000 11111 11122233333 348999999998777778888888999999876
Q ss_pred cCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCC
Q 003636 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (806)
Q Consensus 438 H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~ 517 (806)
|+.... ..+++.++.+|.+++++++... . ..
T Consensus 122 ~~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~------------------------~---~~ 152 (357)
T PRK00726 122 QNAVPG----------------------LANKLLARFAKKVATAFPGAFP------------------------E---FF 152 (357)
T ss_pred CCCCcc----------------------HHHHHHHHHhchheECchhhhh------------------------c---cC
Confidence 643110 1134567789999998874311 0 12
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHH-HHHHH
Q 003636 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV-ECYGK 596 (806)
Q Consensus 518 ~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Ll-ea~~~ 596 (806)
..++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +++.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 6799999999998766542211 12333 45678889999998888876555 99988
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCC
Q 003636 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (806)
Q Consensus 597 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E 676 (806)
+.+. + ..++++|+|.. +.+.+..+ +++. |.+.|+. +++..+++ ++|++|.++-
T Consensus 209 ~~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~-~~d~~i~~~g-- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYA-AADLVICRAG-- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHH-hCCEEEECCC--
Confidence 8654 3 56778898854 33444445 6664 9999943 47888888 5999998762
Q ss_pred CCcHHHHHHHHcCCCEEEcCCcC--------cccccccCCcEEEECCCC--HHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003636 677 AFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGG 746 (806)
Q Consensus 677 ~fGltvlEAMa~GlPVVAt~~GG--------~~EiI~dg~~G~li~p~d--~e~la~aI~~~l~~l~~dp~~~~~ms~~a 746 (806)
+++++|||+||+|+|++..++ ..+.+.++++|++++++| +++++++|.++ ++|++.+++|++++
T Consensus 262 --~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~l----l~~~~~~~~~~~~~ 335 (357)
T PRK00726 262 --ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLEL----LSDPERLEAMAEAA 335 (357)
T ss_pred --HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHH----HcCHHHHHHHHHHH
Confidence 689999999999999997653 235677788999999888 99999999654 48999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHH
Q 003636 747 LKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 747 r~~v~~~ysw~~~a~~ll~ly~ 768 (806)
++++ +.++-+.+++.++++.+
T Consensus 336 ~~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 336 RALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred HhcC-CcCHHHHHHHHHHHHhh
Confidence 9886 78999999999988754
No 70
>PHA01633 putative glycosyl transferase group 1
Probab=99.95 E-value=3.6e-25 Score=242.36 Aligned_cols=225 Identities=12% Similarity=0.144 Sum_probs=167.5
Q ss_pred HhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcch
Q 003636 471 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 550 (806)
Q Consensus 471 a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i 550 (806)
.|.+.+.+|++|...++..+ ..|++ .+ + +|+||+|.+.|.|........+
T Consensus 89 ~m~~~~~vIavS~~t~~~L~--------------------~~G~~--~~-i-~I~~GVD~~~f~p~~~~~~~~r------ 138 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQ--------------------EVGLQ--VD-L-PVFHGINFKIVENAEKLVPQLK------ 138 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHH--------------------HhCCC--Cc-e-eeeCCCChhhcCccchhhHHHH------
Confidence 45667789999987665211 13443 22 3 4789999999987542211111
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003636 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (806)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 626 (806)
+.++.. .++.++|+++||++++||++.|++|++++.+..|+ ++|+++|++
T Consensus 139 -----------~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 139 -----------QKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred -----------HHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 122221 14678899999999999999999999999876664 578888732
Q ss_pred HHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccccccc
Q 003636 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (806)
Q Consensus 627 ~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d 706 (806)
..+++++.++|+|+|... .++.+++.++|+ ++|+||+||.+|+||++++|||+||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~-~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYG-AMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHH-hCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996332 456789999999 499999999999999999999999999999999999887542
Q ss_pred ------------------CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003636 707 ------------------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (806)
Q Consensus 707 ------------------g~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 765 (806)
...||.+++.|+++++++|.++++. .|++.+ +.++++++ ++|+|+.++++|++
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~~---~~~~~~~a-~~f~~~~~~~~~~~ 335 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREER---SMKLKELA-KKYDIRNLYTRFLE 335 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhhh---hHHHHHHH-HhcCHHHHHHHhhC
Confidence 2358889999999999999887632 454433 66777666 89999999998863
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=3e-25 Score=254.89 Aligned_cols=312 Identities=13% Similarity=0.071 Sum_probs=212.7
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHH
Q 003636 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (806)
Q Consensus 407 kPDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 485 (806)
..|+|+.|++...+++.++.++. ..|+++..|..++ .+.. |..+- +...-...+..+|.|.+.|...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP----~~e~-~~~lp-------~~~~ll~~~l~~D~igF~t~~~ 198 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFP----SSEI-FRCLP-------WREELLRGLLGADLIGFQTERY 198 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCC----ChHH-HhhCC-------ChHHHHHHHhcCCEEEECCHHH
Confidence 67999999998877777776553 5889999997543 2222 22111 1111223567799999998764
Q ss_pred HhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccC
Q 003636 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (806)
Q Consensus 486 ~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g 565 (806)
....-..+...... ... ........|. ..++.++|||||.+.|.+.......... + ++..+
T Consensus 199 ~~~Fl~~~~~~l~~-~~~-~~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~~----~----------~~~~~ 259 (460)
T cd03788 199 ARNFLSCCSRLLGL-EVT-DDGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQER----A----------AELRE 259 (460)
T ss_pred HHHHHHHHHHHcCC-ccc-CCceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHHH----H----------HHHHH
Confidence 43211111000000 000 0000011121 3578999999999988754221110000 0 01122
Q ss_pred CCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003636 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (806)
Q Consensus 566 ~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~- 640 (806)
. .+++++|+++||+++.||++.+++|++++.+.+|+ ++|+++|++... ...+.....+.+.+++.+.+..
T Consensus 260 ~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g---~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 260 R--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRT---DVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred h--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCc---CcHHHHHHHHHHHHHHHHHHhcc
Confidence 2 35788999999999999999999999998877775 679999875421 1123334555666666654321
Q ss_pred -----CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCC----EEEcCCcCcccccccCCcEE
Q 003636 641 -----GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIEHGASGF 711 (806)
Q Consensus 641 -----~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlP----VVAt~~GG~~EiI~dg~~G~ 711 (806)
..|++++ +.++.+++..+|+ ++|+||+||..|+||++++|||+||+| ||+|+.+|..+. +.+|+
T Consensus 335 g~~~~~~v~~~~---g~v~~~el~~~y~-~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~ 407 (460)
T cd03788 335 GTLDWTPVRYLY---RSLPREELAALYR-AADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGAL 407 (460)
T ss_pred CCCCceeEEEEe---CCCCHHHHHHHHH-hccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCE
Confidence 2355543 1668899999999 599999999999999999999999999 999998888877 56899
Q ss_pred EECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003636 712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (806)
Q Consensus 712 li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 765 (806)
+++|.|++++|++|.++++ .+++.++++++++++++ ++|||+..+++++.
T Consensus 408 lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 408 LVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred EECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 9999999999999977652 35688899999999998 78999999999875
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=2.6e-24 Score=236.91 Aligned_cols=322 Identities=13% Similarity=0.108 Sum_probs=221.4
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCccccccccc
Q 003636 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (806)
Q Consensus 301 tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~i 380 (806)
+||....+. .|++.|.++||+|+ ++|...... .+.. ...++++.++|+....+
T Consensus 9 ~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~------ 61 (350)
T cd03785 9 TGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR------ 61 (350)
T ss_pred chhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC------
Confidence 578888777 77778899999999 888753211 0111 11246777777643211
Q ss_pred ccCCchhhHH------HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhh
Q 003636 381 SRFDVWPYLE------TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKK 454 (806)
Q Consensus 381 sr~~i~~yl~------~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~ 454 (806)
...+..+. .....+.+.+. +.+||+||+|.+..+..+.++++..++|+++..|+..+ .
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~-----------~ 125 (350)
T cd03785 62 --KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP-----------G 125 (350)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------c
Confidence 11111111 11122333333 34899999998777777788888999999875554211 0
Q ss_pred hhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCC
Q 003636 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (806)
Q Consensus 455 l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~ 534 (806)
..+++.++.+|.|+++|+...+. + .+.++.+++||+|.+.+.
T Consensus 126 -----------~~~~~~~~~~~~vi~~s~~~~~~-------------------------~--~~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 -----------LANRLLARFADRVALSFPETAKY-------------------------F--PKDKAVVTGNPVREEILA 167 (350)
T ss_pred -----------HHHHHHHHhhCEEEEcchhhhhc-------------------------C--CCCcEEEECCCCchHHhh
Confidence 01234567799999999876440 1 267899999999987765
Q ss_pred CCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHH-HHHHHHHhhccCCCeEE-EEEeCc
Q 003636 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNL-VVVAGY 612 (806)
Q Consensus 535 p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~-Llea~~~l~~~~~~v~L-vIVG~g 612 (806)
+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++++ +++|.+
T Consensus 168 ~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4321 123455 567788888888777777654 5588888863 45664 467776
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCE
Q 003636 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (806)
Q Consensus 613 ~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPV 692 (806)
. .+++.+.++++ .++|+|.|++ .++..+|+ .+|++|.++- +++++|||+||+|+
T Consensus 222 -~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~-~ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 222 -D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYA-AADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred -c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHH-hcCEEEECCC----HhHHHHHHHhCCCE
Confidence 4 35566667665 4689999943 57888888 4999998762 68999999999999
Q ss_pred EEcCCcC--------cccccccCCcEEEECCC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003636 693 FATCHGG--------PAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYS 760 (806)
Q Consensus 693 VAt~~GG--------~~EiI~dg~~G~li~p~--d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a 760 (806)
|++..++ ..+.+.++++|++++++ |+++++++|.+++ +|++.+++|++++++++ +.+.-++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~ 348 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA-RPDAAERIA 348 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9987654 35677777899999987 8999999997655 79999999999999887 456555554
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=8.1e-24 Score=232.88 Aligned_cols=315 Identities=15% Similarity=0.139 Sum_probs=207.4
Q ss_pred HHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCcccccccccccCCchhhH---HHHHH
Q 003636 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTE 394 (806)
Q Consensus 318 eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl---~~f~~ 394 (806)
.|+++|.++||+|+ ++|...... . .. ....++++.+++.....+ .+....++.. .....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~-----~-~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE-----K-RL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch-----h-cc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67888999999999 888532100 0 00 011246777777643211 0011111111 11222
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhh
Q 003636 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~ 474 (806)
.+.+.++ +.+||+||+|.+..+..+.++++..++|+|+..|+... . ..+++..+.
T Consensus 81 ~l~~~i~---~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~--------~--------------~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILK---KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP--------G--------------LTNKLLSRF 135 (348)
T ss_pred HHHHHHH---hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc--------c--------------HHHHHHHHH
Confidence 3333333 45899999998777777777888899998754332110 0 013456778
Q ss_pred CCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhc
Q 003636 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (806)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l 554 (806)
+|.+++.|+...+ | -+..+|+||+|...+.+....
T Consensus 136 ~d~ii~~~~~~~~--------~----------------------~~~~~i~n~v~~~~~~~~~~~--------------- 170 (348)
T TIGR01133 136 AKKVLISFPGAKD--------H----------------------FEAVLVGNPVRQEIRSLPVPR--------------- 170 (348)
T ss_pred hCeeEECchhHhh--------c----------------------CCceEEcCCcCHHHhcccchh---------------
Confidence 9999999987643 0 123689999987665442111
Q ss_pred cCccccccccCCCCCCCCCEEEEEecCCcCCCHHH-HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003636 555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (806)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~-Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (806)
+.+++ ++++++|+++|+....|++.. +++++.++.+. +.++++++++.. .+.+++.
T Consensus 171 -------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~ 227 (348)
T TIGR01133 171 -------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNV 227 (348)
T ss_pred -------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHH
Confidence 12444 467788999998888888654 55888887653 466655554433 3467777
Q ss_pred HHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcC-------ccccccc
Q 003636 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-------PAEIIEH 706 (806)
Q Consensus 634 i~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG-------~~EiI~d 706 (806)
++++++.+.+.|.. . ++..+|+ ++|++|.++ + |++++|||+||+|+|+++.+| ..+++.+
T Consensus 228 ~~~~~l~~~v~~~~-------~-~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 228 YQELGIEAIVTFID-------E-NMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HhhCCceEEecCcc-------c-CHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 88887765555542 1 5777888 599999875 2 789999999999999997654 2357888
Q ss_pred CCcEEEECCCC--HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003636 707 GASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 761 (806)
Q Consensus 707 g~~G~li~p~d--~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~ 761 (806)
+.+|++++++| +++++++|.+++ +||+.+++|++++++++ +...-+++++
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 99999999876 999999996654 89999999999998876 4444444443
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=7.7e-24 Score=242.15 Aligned_cols=320 Identities=16% Similarity=0.144 Sum_probs=216.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhh
Q 003636 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~ 473 (806)
...+.+.+.. ..-|+|.+|+..-.+++.++.++. ..++.+..|..++ .++++.. ..+...-...|-
T Consensus 116 ~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP----~~e~f~~--------lp~r~~il~gll 182 (456)
T TIGR02400 116 LFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFP----SSEIYRT--------LPWRRELLEGLL 182 (456)
T ss_pred HHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCC----ChHHHhh--------CCcHHHHHHHHh
Confidence 3444444432 345899999999888888887764 4577888996433 2332211 111122345788
Q ss_pred hCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHH---HHHHhhhcch
Q 003636 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (806)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~---~rl~~~~~~i 550 (806)
.||.|-+.|+..++..-..+.+.-... ..++-. ...| -..++.++|||||++.|.+..... .+...
T Consensus 183 ~~dligF~t~~~~~~Fl~~~~~~l~~~--~~~~~~-~~~g---~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~----- 251 (456)
T TIGR02400 183 AYDLVGFQTYDDARNFLSAVSRELGLE--TLPNGV-ESGG---RTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAE----- 251 (456)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHhCCc--ccCCce-EECC---cEEEEEEecCcCCHHHHHHHhcChhHHHHHHH-----
Confidence 999999999987764333222110000 000000 0111 145788999999999987643221 11111
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003636 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (806)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 626 (806)
.++.+ +++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|+... ....+....
T Consensus 252 ---------lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l 314 (456)
T TIGR02400 252 ---------LRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQL 314 (456)
T ss_pred ---------HHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHH
Confidence 11111 3678999999999999999999999998777775 56888864321 011222223
Q ss_pred HHHHHHHHHHcC-CCCc-----EEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCC----EEEcC
Q 003636 627 IEKMHELMKTYK-LDGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATC 696 (806)
Q Consensus 627 ~~~l~~li~~~~-l~~~-----V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlP----VVAt~ 696 (806)
.+.+++++.+.+ ..+. |.+++ ..++.+++..+|+ ++|+||+||..|+||++++||||||+| +|+|+
T Consensus 315 ~~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~ 390 (456)
T TIGR02400 315 RRQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSE 390 (456)
T ss_pred HHHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeC
Confidence 334444433221 1111 44444 2667899999999 599999999999999999999999999 99999
Q ss_pred CcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 697 HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 697 ~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
.+|..+.+. +|++++|.|++++|++|.++++ .+++.+++..+++++++ .+||+...++++++-
T Consensus 391 ~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 391 FAGAAQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred CCCChHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 999888883 7999999999999999987662 47889999999999998 569999999998863
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=1.9e-23 Score=237.56 Aligned_cols=285 Identities=15% Similarity=0.138 Sum_probs=193.6
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHH
Q 003636 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (806)
Q Consensus 406 ~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 485 (806)
.+||+||++.+.........+++.|+|++++-|.+... +...|+.+ . ...+..++.+|.|++.|+..
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~-------~--~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKF-------K--RFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHH-------H--HHHHHHHHhCCEEEECCHHH
Confidence 38999998865543333345677899998876543211 11111111 1 12345788999999999987
Q ss_pred HhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccC
Q 003636 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (806)
Q Consensus 486 ~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g 565 (806)
.+... ..|++ .. +.+++|+ +.+.+.+....... . ..++.++
T Consensus 190 ~~~l~--------------------~~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~--------------~~r~~~~ 230 (425)
T PRK05749 190 AERFL--------------------ALGAK--NE-VTVTGNL-KFDIEVPPELAARA-A--------------TLRRQLA 230 (425)
T ss_pred HHHHH--------------------HcCCC--CC-cEecccc-cccCCCChhhHHHH-H--------------HHHHHhc
Confidence 65211 12433 45 7788874 33333222111110 0 0112233
Q ss_pred CCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003636 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (806)
Q Consensus 566 ~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~f 645 (806)
+++++++++|+. .|+.+.+++|+.++.+.+|+++|+|+|+|+. ..+++.++++++|+. .+.|
T Consensus 231 ----~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~-~~~~ 292 (425)
T PRK05749 231 ----PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLS-YVRR 292 (425)
T ss_pred ----CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCc-EEEc
Confidence 356788888864 6889999999999887789999999999876 125688888888885 3555
Q ss_pred cccccCc--------CChHHHHHHHHccCcEE-EECCCCCCCcHHHHHHHHcCCCEEEcCC-cCcccccccC-CcEEEEC
Q 003636 646 IAAQTNR--------ARNGELYRYIADTKGAF-VQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG-ASGFHID 714 (806)
Q Consensus 646 lG~~~~~--------~~~~el~~~la~aaDif-V~PS~~E~fGltvlEAMa~GlPVVAt~~-GG~~EiI~dg-~~G~li~ 714 (806)
.|..... -..+++..+|+ .+|++ |.+|..|++|.+++|||+||+|||++.. ++..|+++.. .+|++++
T Consensus 293 ~~~~~~~~~~~v~l~~~~~el~~~y~-~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~ 371 (425)
T PRK05749 293 SQGEPPSADTDVLLGDTMGELGLLYA-IADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQ 371 (425)
T ss_pred cCCCCCCCCCcEEEEecHHHHHHHHH-hCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEE
Confidence 5421100 02468999999 59995 5578889999999999999999999854 6677766553 4688888
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 715 p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
++|+++++++|.+++ +||+.+++|+++|++.+.++ ...++++++++.
T Consensus 372 ~~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 372 VEDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred ECCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 999999999996654 89999999999999999665 356666666655
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.90 E-value=6.8e-22 Score=221.34 Aligned_cols=262 Identities=11% Similarity=0.073 Sum_probs=178.6
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHH
Q 003636 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (806)
Q Consensus 406 ~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 485 (806)
.+||+||++++..++.....++..++|+++++++....+ .+..+.+|.++++|+..
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------------------------~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------------------------IWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------------------------ccccCCCCEEEECCHHH
Confidence 489999998776654444444456799886665432100 12466899999999876
Q ss_pred HhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccC
Q 003636 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (806)
Q Consensus 486 ~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g 565 (806)
.+.. ...|++ .+|+.++.+.++.....+..... .++++|
T Consensus 159 ~~~l--------------------~~~gi~--~~ki~v~G~p~~~~f~~~~~~~~-------------------~~~~~~ 197 (380)
T PRK13609 159 KKVL--------------------VDIGVP--PEQVVETGIPIRSSFELKINPDI-------------------IYNKYQ 197 (380)
T ss_pred HHHH--------------------HHcCCC--hhHEEEECcccChHHcCcCCHHH-------------------HHHHcC
Confidence 5411 112443 67888876655432221221111 123466
Q ss_pred CCCCCCCC-EEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003636 566 TLSDRSKP-IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (806)
Q Consensus 566 ~l~~~~k~-iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~ 644 (806)
+ +++++ ++++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|+
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcEE
Confidence 6 44555 455668888889999999987642 6789988865422 12456666666654 6899
Q ss_pred EcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC-CcCc----ccccccCCcEEEECCCCHH
Q 003636 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGP----AEIIEHGASGFHIDPYHPD 719 (806)
Q Consensus 645 flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~-~GG~----~EiI~dg~~G~li~p~d~e 719 (806)
|+|+. +++.++++ ++|++|. ++.|++++|||+||+|+|+++ .+|. .+.+.+ +|+.+.+.|++
T Consensus 260 ~~g~~------~~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYV------ENIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEech------hhHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 99954 25778888 5999985 567999999999999999985 5553 233433 34444567999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 720 ~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
+++++|.+++ +|++.+++|++++++.. +.++++.+++.+++++.
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 327 EVFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENH 370 (380)
T ss_pred HHHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhh
Confidence 9999996654 89999999999998765 66899999999998765
No 77
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=3.7e-23 Score=204.81 Aligned_cols=160 Identities=28% Similarity=0.482 Sum_probs=143.5
Q ss_pred CCCCCEEEEEecCCcCCCHHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003636 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (806)
Q Consensus 569 ~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG 647 (806)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+.. ...+...++.+++.++|.|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 57889999999999999999999999999764 68999999996654 567888999999999999999
Q ss_pred cccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHH
Q 003636 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (806)
Q Consensus 648 ~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~ 727 (806)
..+.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 5567899999995 99999999999999999999999999999999999999999999999999999999999976
Q ss_pred HHHhhcCCHHHHHHHHHHHHHH
Q 003636 728 FFGKCKENPSHWKKISDGGLKR 749 (806)
Q Consensus 728 ~l~~l~~dp~~~~~ms~~ar~~ 749 (806)
++ +|++.++.|+++|++|
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 65 7899999999999875
No 78
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.89 E-value=9.5e-22 Score=237.98 Aligned_cols=323 Identities=13% Similarity=0.138 Sum_probs=215.8
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhh
Q 003636 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~ 473 (806)
.+...+.... ..-|+|-.|.....+++..+.++. ..++.+..|..++ .+.++. ...+...-+..|-
T Consensus 136 ~FA~~i~~~~-~~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFP----s~e~fr--------~lp~r~~il~gll 202 (797)
T PLN03063 136 MFLDVVKENY-EEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFP----SSEIYK--------TLPSRSELLRAVL 202 (797)
T ss_pred HHHHHHHHhc-CCCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCC----CHHHHh--------hCCCHHHHHHHHh
Confidence 3444444432 234899999999888888887764 5788889997644 223221 1111122345788
Q ss_pred hCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchH---HHHHHhhhcch
Q 003636 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK---QKRLTALHGSI 550 (806)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~---~~rl~~~~~~i 550 (806)
.||.|-+.|+..+...-..+...-. ...+..++ ...|- ..++.++|||||.+.|.+.... ..+...+
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~l~-~~~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~~~~l---- 272 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRILG-VEGTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQHMKEL---- 272 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHHhC-ccccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHHHHHH----
Confidence 9999999998765422111111000 00000000 01111 3478899999999888653221 1111110
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCe----EEEEEeCcCCCCCCcchHHHHH
Q 003636 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIAE 626 (806)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~~~ 626 (806)
++. ..++++|+++||+++.||+..+++||.++.+.+|++ .|+.+++... .+..+
T Consensus 273 ----------r~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr-------~~~~~ 330 (797)
T PLN03063 273 ----------KRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR-------NDVPE 330 (797)
T ss_pred ----------HHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC-------CchHH
Confidence 011 135789999999999999999999999998777775 3554543211 11122
Q ss_pred HHHHHHHHHHcC--CC---CcEEEccc--ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCC----EEEc
Q 003636 627 IEKMHELMKTYK--LD---GQFRWIAA--QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFAT 695 (806)
Q Consensus 627 ~~~l~~li~~~~--l~---~~V~flG~--~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlP----VVAt 695 (806)
.+++++.++++. +. +.+.|.+. ....++.+++..+|+ +||+||+||..||||++++||||||+| +|+|
T Consensus 331 y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlS 409 (797)
T PLN03063 331 YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLS 409 (797)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEee
Confidence 334444454442 22 22333331 113578899999999 599999999999999999999999999 9999
Q ss_pred CCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 696 ~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
..+|.++.+ +.+|++++|.|++++|++|.+++. .+++.+++..+..++++ .++||...++.+++-+..
T Consensus 410 e~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 410 EFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELND 477 (797)
T ss_pred CCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHH
Confidence 999999976 557999999999999999987762 38888888899999998 788999999999886653
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=1.1e-20 Score=211.63 Aligned_cols=266 Identities=12% Similarity=0.078 Sum_probs=177.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHH
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 484 (806)
+.+.++++.+.+....++ +...+.++|+.+++..... ...... . ...+..+++.||.|+++|..
T Consensus 100 ~~~~~i~~~~~P~~~~~~---~~~~~~~~Vyd~~D~~~~~-~~~~~~---~---------~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPVA---ALLQASLVVYDCVDDLSAF-PGGPPE---L---------LEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHHH---hhcCCCeEEEEcccchhcc-CCCCHH---H---------HHHHHHHHHhCCEEEECCHH
Confidence 556666666655543333 3356788898888754322 111100 0 13467789999999999988
Q ss_pred HHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccccc
Q 003636 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (806)
Q Consensus 485 ~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (806)
..+.. ... ..++.+||||+|.+.|.+......... .
T Consensus 164 l~~~~----------------------~~~---~~~i~~i~ngvd~~~f~~~~~~~~~~~-----------------~-- 199 (373)
T cd04950 164 LYEAK----------------------RRL---NPNVVLVPNGVDYEHFAAARDPPPPPA-----------------D-- 199 (373)
T ss_pred HHHHH----------------------hhC---CCCEEEcccccCHHHhhcccccCCChh-----------------H--
Confidence 65411 011 368999999999998876432110000 0
Q ss_pred CCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003636 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (806)
Q Consensus 565 g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~ 644 (806)
....++++|+|+|++.+.++++.+.++.. ..|+++|+|+|++... . .... ....++|+
T Consensus 200 --~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------~------~~~~----~~~~~nV~ 257 (373)
T cd04950 200 --LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------I------DPSA----LLRLPNVH 257 (373)
T ss_pred --HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------c------ChhH----hccCCCEE
Confidence 01346789999999999888876655544 3478999999998320 0 0111 11246899
Q ss_pred EcccccCcCChHHHHHHHHccCcEEEECCCC-----CCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHH
Q 003636 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (806)
Q Consensus 645 flG~~~~~~~~~el~~~la~aaDifV~PS~~-----E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e 719 (806)
|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. +..+..+++ .++|++
T Consensus 258 ~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~ 328 (373)
T cd04950 258 YLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPE 328 (373)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHH
Confidence 999 6778999999995 9999999863 4689999999999999999986544 444444444 467999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 720 ~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
+++++|.+++. ..++...+ .+.+ +.+.|||+..++++++...
T Consensus 329 ~~~~ai~~~l~--~~~~~~~~----~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 329 EFVAAIEKALL--EDGPARER----RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHHh--cCCchHHH----HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 99999987652 12222222 2222 5588999999999996543
No 80
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.88 E-value=7.9e-21 Score=222.68 Aligned_cols=350 Identities=13% Similarity=0.111 Sum_probs=241.7
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH--------------cCCcEEEEecCCCcccC---CCChh-----
Q 003636 393 TEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK--------------MGITQCTIAHALEKTKY---PDSDI----- 450 (806)
Q Consensus 393 ~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~--------------lgvp~v~t~H~l~~~k~---~~s~~----- 450 (806)
.....+.++ .+..+||+||+|.|.++++...+.+. ...+.++|.|++.+... +...+
T Consensus 148 ~~a~l~~l~-~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~ 226 (601)
T TIGR02094 148 GIGGVRALR-ALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFG 226 (601)
T ss_pred HHHHHHHHH-HcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhh
Confidence 334444443 34679999999999998877665332 13568999999866553 21111
Q ss_pred --------hHhhhhhh-hh---chhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC
Q 003636 451 --------YWKKFDEK-YH---FSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (806)
Q Consensus 451 --------~~~~l~~~-y~---~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~ 518 (806)
.+..+... .. ...++..-..++..||.|.++|....+.+++..+.+ + .+++...
T Consensus 227 ~~~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~---~~~~~~~ 292 (601)
T TIGR02094 227 DYAANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------Y---PGYEEEE 292 (601)
T ss_pred hhhhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------h---hhccccc
Confidence 11111000 00 002344556789999999999987655222111110 0 1111113
Q ss_pred CcEEEecCCCCCCCCCCCchHHHHHHhhhcc---------------------h-hhhccCcccccc--------------
Q 003636 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGS---------------------I-EQLLFDPEQNDE-------------- 562 (806)
Q Consensus 519 ~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~---------------------i-~~~l~~~~~~~~-------------- 562 (806)
.++.-|.||||...|.|.+...-......+. + +.+.-++.++.+
T Consensus 293 ~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g 372 (601)
T TIGR02094 293 VPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRG 372 (601)
T ss_pred CCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 4588999999999998765433211111111 1 111111112211
Q ss_pred -------ccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhcc--C--CCeEEEEEeCcCCCCCCcchHHHHHHHHHH
Q 003636 563 -------HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL--R--ELVNLVVVAGYIDVNKSKDREEIAEIEKMH 631 (806)
Q Consensus 563 -------~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~--~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~ 631 (806)
.+|+..+++.+++++++|+..+||.+++++++.++.+. . .++++|+.|.+.. .|...++.++.+.
T Consensus 373 ~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i~ 448 (601)
T TIGR02094 373 ADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRIV 448 (601)
T ss_pred CcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHHH
Confidence 35555678999999999999999999999998887641 1 3699999999865 4556677888899
Q ss_pred HHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEE-CCC-CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCc
Q 003636 632 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ-PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (806)
Q Consensus 632 ~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~-PS~-~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~ 709 (806)
+++++...+++|.|+- .. +..+.+.+..++|++++ ||+ +|++|++-+-||.-|.+.+++..|...|.. ++.|
T Consensus 449 ~la~~~~~~~kv~f~~----~Y-d~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~n 522 (601)
T TIGR02094 449 EFSKRPEFRGRIVFLE----NY-DINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDN 522 (601)
T ss_pred HHHhcccCCCCEEEEc----CC-CHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCc
Confidence 9988766778999975 23 45666666668999999 999 999999999999999999999999998887 6789
Q ss_pred EEEECC------------CCHHHHHHHHHHHH-HhhcCC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003636 710 GFHIDP------------YHPDQAAELMADFF-GKCKEN-----PSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (806)
Q Consensus 710 G~li~p------------~d~e~la~aI~~~l-~~l~~d-----p~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly 767 (806)
||.|.+ .|++++-++|.+.+ ....++ |..|.+|.++|++.....|||++++++|.++|
T Consensus 523 Gf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 523 GWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred EEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 999984 89999999998776 333343 66799999999988767899999999999986
No 81
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=7.9e-21 Score=229.68 Aligned_cols=322 Identities=15% Similarity=0.116 Sum_probs=213.0
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhh
Q 003636 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~ 473 (806)
.+...+....+ .-|+|..|+....+++..+.++. ..++.+..|..++ .+.+.+. ..+...-...|-
T Consensus 122 ~fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP----~~~~f~~--------lp~~~~ll~~ll 188 (726)
T PRK14501 122 RFAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFP----SFEVFRL--------LPWREEILEGLL 188 (726)
T ss_pred HHHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCC----ChHHHhh--------CCChHHHHHHHh
Confidence 33444444322 44899999999888888886653 5778889997654 2232221 111122345788
Q ss_pred hCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHH---HHHHhhhcch
Q 003636 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (806)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~---~rl~~~~~~i 550 (806)
.+|.|-+.|.......-..+...-.. -+-.. .....|- ..++.++|||||.+.|.+..... .+...+
T Consensus 189 ~~Dligf~t~~~~r~Fl~~~~~~l~~--~~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~l---- 258 (726)
T PRK14501 189 GADLIGFHTYDYVRHFLSSVLRVLGY--ETELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRL---- 258 (726)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHcCC--ccCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHHH----
Confidence 99999999887544221111110000 00000 0011111 23689999999999987643211 111110
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003636 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (806)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 626 (806)
++. .+++++|+++||+++.||+..+++|+.++.+.+|+ ++|+++|.+.. ..-.+..+.
T Consensus 259 ----------r~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l 320 (726)
T PRK14501 259 ----------RQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEM 320 (726)
T ss_pred ----------HHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHH
Confidence 011 24677999999999999999999999998777775 78999985422 000222334
Q ss_pred HHHHHHHHHHcC----C---CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHc-----CCCEEE
Q 003636 627 IEKMHELMKTYK----L---DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC-----GLPTFA 694 (806)
Q Consensus 627 ~~~l~~li~~~~----l---~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~-----GlPVVA 694 (806)
.+.+.+++.+.+ . ..-+.+.| .++.+++..+|+ ++|+||+||..|+||++++|||+| |.||++
T Consensus 321 ~~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls 395 (726)
T PRK14501 321 KREIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILS 395 (726)
T ss_pred HHHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEe
Confidence 445555554432 1 12234555 678999999999 599999999999999999999999 556777
Q ss_pred cCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 695 TCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 695 t~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
...|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||..+++++++.|...
T Consensus 396 ~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 396 EMAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELREA 463 (726)
T ss_pred cccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Confidence 7788888876 4899999999999999987762 23445555556788888 7899999999999987754
No 82
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.87 E-value=1.9e-20 Score=210.29 Aligned_cols=264 Identities=13% Similarity=0.132 Sum_probs=182.0
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHH-----HcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEE
Q 003636 405 QGFPDFIIGNYSDG-NLVASLLAY-----KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFI 478 (806)
Q Consensus 405 ~~kPDlIh~h~~~~-~lva~lla~-----~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~I 478 (806)
+.+||+||++++.. ...+.++++ ..++|++++++++.... ..+..+.+|.+
T Consensus 98 ~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~ 154 (382)
T PLN02605 98 KYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRC 154 (382)
T ss_pred hcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEE
Confidence 34899999976542 222223332 24789888777642100 01235689999
Q ss_pred EecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcc
Q 003636 479 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558 (806)
Q Consensus 479 It~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~ 558 (806)
+++|+...+.+ ...|++ .+|+.++++++|.+.+.+......
T Consensus 155 ~~~s~~~~~~l--------------------~~~g~~--~~ki~v~g~~v~~~f~~~~~~~~~----------------- 195 (382)
T PLN02605 155 FCPSEEVAKRA--------------------LKRGLE--PSQIRVYGLPIRPSFARAVRPKDE----------------- 195 (382)
T ss_pred EECCHHHHHHH--------------------HHcCCC--HHHEEEECcccCHhhccCCCCHHH-----------------
Confidence 99998765411 123554 789999999998765443322211
Q ss_pred ccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh----ccCCCeE-EEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003636 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS----QLRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (806)
Q Consensus 559 ~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~----~~~~~v~-LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (806)
.++.+|+ ++++++|+++|+....|++..+++++.+.. ...++.+ ++++|.+.. ..+.+.+.
T Consensus 196 -~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~ 261 (382)
T PLN02605 196 -LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR 261 (382)
T ss_pred -HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh
Confidence 1245777 678899999999999999999999997653 1135565 556665422 12233322
Q ss_pred HHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCC------cCcccccccC
Q 003636 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH------GGPAEIIEHG 707 (806)
Q Consensus 634 i~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~------GG~~EiI~dg 707 (806)
....+|+|+|+. +++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+. +.+.++
T Consensus 262 ----~~~~~v~~~G~~------~~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~ 325 (382)
T PLN02605 262 ----DWKIPVKVRGFV------TNMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDN 325 (382)
T ss_pred ----cccCCeEEEecc------ccHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhC
Confidence 234579999954 26888888 599999865 48999999999999999983 444 444455
Q ss_pred CcEEEECCCCHHHHHHHHHHHHHhhcCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003636 708 ASGFHIDPYHPDQAAELMADFFGKCKEN-PSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (806)
Q Consensus 708 ~~G~li~p~d~e~la~aI~~~l~~l~~d-p~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly 767 (806)
+.|+.+ +|+++++++|.+++ .| ++.+++|++++++++ ...+++.+++.+.++.
T Consensus 326 g~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 326 GFGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELV 379 (382)
T ss_pred Cceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHh
Confidence 577754 79999999997765 56 999999999999887 6678888888887653
No 83
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.86 E-value=3.3e-20 Score=188.40 Aligned_cols=121 Identities=31% Similarity=0.515 Sum_probs=103.6
Q ss_pred EEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChH
Q 003636 577 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (806)
Q Consensus 577 ~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~ 656 (806)
++|++.+.||++.+++++..+.+..++++++++|++.. .......+.+++..++|.++| .++..
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~----~~~~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLG----GLDPE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeC----CCCcH
Confidence 99999999999999999999998888999999999877 333444466778889999999 43334
Q ss_pred HHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEE
Q 003636 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713 (806)
Q Consensus 657 el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li 713 (806)
+....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 444444435999999999999999999999999999999999999999999999874
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=5e-19 Score=187.41 Aligned_cols=292 Identities=23% Similarity=0.318 Sum_probs=210.6
Q ss_pred ceEEEEcCCCchH---HHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHH
Q 003636 408 PDFIIGNYSDGNL---VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (806)
Q Consensus 408 PDlIh~h~~~~~l---va~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 484 (806)
+|++|.+...... .........+.+.+...|....................+. ............+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLL---LKRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHH---HHHHHHhccccccEEEECCHH
Confidence 5999987765432 3455555677888888888654332211111000000000 000011112247888888776
Q ss_pred HHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccccc
Q 003636 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (806)
Q Consensus 485 ~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (806)
.... ... ... ..++.+++|+++.+.+.+.. .
T Consensus 161 ~~~~----~~~----------------~~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKEL----LEA----------------LGV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHH----HHH----------------hCC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 4220 000 011 23788999999998776530 1
Q ss_pred CCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003636 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (806)
Q Consensus 565 g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~ 644 (806)
++..+.....++++||+.+.||++.+++++..+.+..+++.++++|.+... .+.+..++.+++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 111011247999999999999999999999999887777999999999761 244566888888888999
Q ss_pred EcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHH
Q 003636 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724 (806)
Q Consensus 645 flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~a 724 (806)
|+| .++.+++..+++. +|++++||.+|+||++++|||+||+|||+++.++..|++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 4556788888874 89999999999999999999999999999999999999999878997777789999999
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Q 003636 725 MADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYG 771 (806)
Q Consensus 725 I~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~~ 771 (806)
+..++ ++++.++.+++.+++.+.+.|+|+..++++.+++....
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEELL 378 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 97765 67788999998777888789999999999999876543
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.83 E-value=8.4e-19 Score=197.70 Aligned_cols=270 Identities=14% Similarity=0.151 Sum_probs=180.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhh
Q 003636 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~ 474 (806)
.+.+.+.+ .+||+||++.+..++.....++..++|+++..++... . .. +..+.
T Consensus 95 ~l~~~l~~---~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~-----~-~~------------------w~~~~ 147 (391)
T PRK13608 95 KLINLLIK---EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRL-----H-KN------------------WITPY 147 (391)
T ss_pred HHHHHHHH---hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCc-----c-cc------------------cccCC
Confidence 34444443 4999999976655433222234468998654443210 0 00 13568
Q ss_pred CCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhc
Q 003636 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (806)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l 554 (806)
+|.++++|+...+.+ ...|++ ..|+.++.++++.....+.....
T Consensus 148 ~d~~~v~s~~~~~~l--------------------~~~gi~--~~ki~v~GiPv~~~f~~~~~~~~-------------- 191 (391)
T PRK13608 148 STRYYVATKETKQDF--------------------IDVGID--PSTVKVTGIPIDNKFETPIDQKQ-------------- 191 (391)
T ss_pred CCEEEECCHHHHHHH--------------------HHcCCC--HHHEEEECeecChHhcccccHHH--------------
Confidence 999999998865521 123554 67898888877754332222111
Q ss_pred cCccccccccCCCCCCCCCE-EEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003636 555 FDPEQNDEHVGTLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (806)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~i-I~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (806)
.++++|+ ++++++ +++.|++...||++.+++++.+ ..+++++++++|+.. ...+ ++
T Consensus 192 -----~~~~~~l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~----------~l~~---~l 248 (391)
T PRK13608 192 -----WLIDNNL--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK----------ELKR---SL 248 (391)
T ss_pred -----HHHHcCC--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH----------HHHH---HH
Confidence 1133565 445554 5678999988999999998642 336789987765432 0112 23
Q ss_pred HHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC-CcC----cccccccCC
Q 003636 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGG----PAEIIEHGA 708 (806)
Q Consensus 634 i~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~-~GG----~~EiI~dg~ 708 (806)
.+.++..++|.++|+. +++..+++ ++|++|. .+.|+|+.|||+||+|+|+++ .+| ....+.+.+
T Consensus 249 ~~~~~~~~~v~~~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G 317 (391)
T PRK13608 249 TAKFKSNENVLILGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKG 317 (391)
T ss_pred HHHhccCCCeEEEecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCC
Confidence 3334455689999953 36888888 5999996 457999999999999999995 333 223445666
Q ss_pred cEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 709 ~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
.|+.. +|+++++++|.+++ +|++.+++|++++++.. +.|+++.+++.+++++.
T Consensus 318 ~g~~~--~~~~~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 318 FGKIA--DTPEEAIKIVASLT----NGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred cEEEe--CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 67654 58999999996654 89999999999999886 67999999999998754
No 86
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.79 E-value=4.1e-17 Score=186.57 Aligned_cols=314 Identities=11% Similarity=0.050 Sum_probs=213.8
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHH
Q 003636 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (806)
Q Consensus 407 kPDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 485 (806)
.-|+|-.|+....+++..+.++. ..++-+..|..++ .++++. ...+...-...|-.||.|=+.|+..
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFP----s~eifr--------~LP~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFP----SADVFN--------ILPWREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCC----ChHHHh--------hCCchHHHHHHHhcCCeEEeCCHHH
Confidence 45899999999888888887653 4677788887543 222221 1112222344688999999999876
Q ss_pred Hhhccccccccccccc-cc---ccccc---------eeeccCCCC--CCcEEEecCCCCCCCCCCCchH---HHHHHhhh
Q 003636 486 IAGTKNTVGQYESHTA-FT---LPGLY---------RVVHGIDVF--DPKFNIVSPGADMDIYFPYSEK---QKRLTALH 547 (806)
Q Consensus 486 ~~~~k~~v~qy~~~~~-f~---~p~l~---------~~~~Gi~v~--~~k~~VIpnGVD~~~f~p~~~~---~~rl~~~~ 547 (806)
+...-+.+.+.-.... .. .+... ....++... .-++.++|.|||.+.|.+.... ..+...
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~-- 277 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMER-- 277 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHH--
Confidence 6532222221100000 00 00000 000011111 1257899999999988653211 111111
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHH
Q 003636 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREE 623 (806)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee 623 (806)
.++.+| ++++|++++|++..||+...++||.++.+.+|+ +.|++||.+.. +...+.
T Consensus 278 ------------lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr---~~v~~y 337 (487)
T TIGR02398 278 ------------IRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAA---SGMTIY 337 (487)
T ss_pred ------------HHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCc---ccchHH
Confidence 122233 678999999999999999999999999877885 79999998654 222344
Q ss_pred HHHHHHHHHHHHHc-------CCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC----CE
Q 003636 624 IAEIEKMHELMKTY-------KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PT 692 (806)
Q Consensus 624 ~~~~~~l~~li~~~-------~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~Gl----PV 692 (806)
.+..+++.+++.+. +..+-+.+.+ .++.+++..+|+ +||+++.||..||++++..|+|+|+. |+
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 55666777777664 4444456666 788999999999 59999999999999999999999998 99
Q ss_pred EEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 693 VAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
|.|..+|.++.+ ..+++++|.|++++|++|.++++ ..++.+++--+..++++ .++|....++.++.-
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~~fl~~ 479 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWADEFLAA 479 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 999999998776 35899999999999999998773 35555555556666666 677888888877753
No 87
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.79 E-value=4.6e-18 Score=189.49 Aligned_cols=283 Identities=14% Similarity=0.101 Sum_probs=181.3
Q ss_pred HHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHH-H
Q 003636 394 EDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLI-A 471 (806)
Q Consensus 394 ~~~~~~i~~~~~~kPDlIh~h~~-~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~-a 471 (806)
..+.+.+.+ .+||+||+|.. ...+.+.++++..|+|++.+-+++ .+...... |... ..+. .
T Consensus 76 ~~l~~~l~~---~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~~--~~~~-----------~~r~~~ 138 (365)
T TIGR00236 76 EGLEELLLE---EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYSP--MPEE-----------INRQLT 138 (365)
T ss_pred HHHHHHHHH---cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCCC--CccH-----------HHHHHH
Confidence 344444444 48999999964 446778999999999987654443 11000000 1000 0112 2
Q ss_pred hhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchh
Q 003636 472 MNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIE 551 (806)
Q Consensus 472 ~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~ 551 (806)
.+.+|.++++|....+. +. ..|++ +.++.+++||+....+.+......
T Consensus 139 ~~~ad~~~~~s~~~~~~------------------l~--~~G~~--~~~I~vign~~~d~~~~~~~~~~~---------- 186 (365)
T TIGR00236 139 GHIADLHFAPTEQAKDN------------------LL--RENVK--ADSIFVTGNTVIDALLTNVEIAYS---------- 186 (365)
T ss_pred HHHHHhccCCCHHHHHH------------------HH--HcCCC--cccEEEeCChHHHHHHHHHhhccc----------
Confidence 33589999999887652 11 12554 779999999973222211110000
Q ss_pred hhccCccccccccCCCCCCCCCEEEEEe-cCC-cCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003636 552 QLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (806)
Q Consensus 552 ~~l~~~~~~~~~~g~l~~~~k~iI~~vG-RL~-~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (806)
...++.++. +++++++.+ |.. ..||++.+++++.++.+..|+++++++|++.. . ...
T Consensus 187 ------~~~~~~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~-------~---~~~- 245 (365)
T TIGR00236 187 ------SPVLSEFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP-------V---VRE- 245 (365)
T ss_pred ------hhHHHhcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh-------H---HHH-
Confidence 001122331 234555444 543 35899999999999887778899999875432 0 111
Q ss_pred HHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc-CCcCcccccccCC
Q 003636 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGA 708 (806)
Q Consensus 630 l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt-~~GG~~EiI~dg~ 708 (806)
.+.+.++..++|+|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.+|
T Consensus 246 --~~~~~~~~~~~v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g- 312 (365)
T TIGR00236 246 --PLHKHLGDSKRVHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG- 312 (365)
T ss_pred --HHHHHhCCCCCEEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-
Confidence 1233445667899998 5667788888985 99999987 66789999999999996 778888988766
Q ss_pred cEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003636 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (806)
Q Consensus 709 ~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 765 (806)
+|+++ +.|+++++++|.+++ +|++.++++++++..+. +..+++++++.+.+
T Consensus 313 ~~~lv-~~d~~~i~~ai~~ll----~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 313 TNKLV-GTDKENITKAAKRLL----TDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred ceEEe-CCCHHHHHHHHHHHH----hChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 55666 579999999996654 79999998887663222 33455555555444
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.79 E-value=2.1e-17 Score=182.47 Aligned_cols=244 Identities=11% Similarity=0.110 Sum_probs=165.5
Q ss_pred Cc-eEEEEcCCCc-h--HHHHHH--HHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEe
Q 003636 407 FP-DFIIGNYSDG-N--LVASLL--AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (806)
Q Consensus 407 kP-DlIh~h~~~~-~--lva~ll--a~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt 480 (806)
+| |+||.+++.. + +...++ .++.|+|+|+++|++++........ + ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~----------~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYY----------L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccch----------h---hHHHHHHHHhCCEEEE
Confidence 56 9999998754 2 112222 2344899999999976532211100 0 1235678999999999
Q ss_pred cCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccc
Q 003636 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (806)
Q Consensus 481 ~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (806)
+|....+..+ ..|+. ..++.+++++.+.....+.
T Consensus 130 ~S~~~~~~l~--------------------~~g~~--~~~i~~~~~~~~~~~~~~~------------------------ 163 (333)
T PRK09814 130 HSKKMKDRLV--------------------EEGLT--TDKIIVQGIFDYLNDIELV------------------------ 163 (333)
T ss_pred CCHHHHHHHH--------------------HcCCC--cCceEeccccccccccccc------------------------
Confidence 9998765211 13443 5577777665533111000
Q ss_pred ccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003636 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (806)
Q Consensus 561 ~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~ 640 (806)
. ....++.|+|+|++.+.+++. + ..++++|+|+|+|+. .. ...
T Consensus 164 -~-----~~~~~~~i~yaG~l~k~~~l~---~-------~~~~~~l~i~G~g~~------------~~---------~~~ 206 (333)
T PRK09814 164 -K-----TPSFQKKINFAGNLEKSPFLK---N-------WSQGIKLTVFGPNPE------------DL---------ENS 206 (333)
T ss_pred -c-----cccCCceEEEecChhhchHHH---h-------cCCCCeEEEECCCcc------------cc---------ccC
Confidence 0 023456899999999543211 1 236799999999976 11 245
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCC-----------CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCc
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~-----------~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~ 709 (806)
++|.|+| .++.+++..+++. |+.+.+.. .-++|.++.|+||||+|||+++.|+..++|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 7788999999985 44443321 13578899999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003636 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 761 (806)
Q Consensus 710 G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~ 761 (806)
|++++ +.++++++|..+ +++.+++|++++++.. +++.-..+++
T Consensus 281 G~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~-~~~~~g~~~~ 323 (333)
T PRK09814 281 GFVVD--SLEELPEIIDNI------TEEEYQEMVENVKKIS-KLLRNGYFTK 323 (333)
T ss_pred eEEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHH-HHHhcchhHH
Confidence 99997 678888888542 4577899999999876 4544333333
No 89
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.77 E-value=1.1e-16 Score=191.01 Aligned_cols=341 Identities=13% Similarity=0.114 Sum_probs=232.8
Q ss_pred HHcCCCceEEEEcCCCchHHHH-----HHHHH----------cCCcEEEEecCCCcccCCCC--hhh-------------
Q 003636 402 AELQGFPDFIIGNYSDGNLVAS-----LLAYK----------MGITQCTIAHALEKTKYPDS--DIY------------- 451 (806)
Q Consensus 402 ~~~~~kPDlIh~h~~~~~lva~-----lla~~----------lgvp~v~t~H~l~~~k~~~s--~~~------------- 451 (806)
+.+..+||+||+|.+.++++.. ++... ...+.|+|.|+..+.....- +..
T Consensus 243 r~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl 322 (778)
T cd04299 243 RALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGL 322 (778)
T ss_pred HHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCC
Confidence 3346689999999999988776 44321 13568999999855442110 111
Q ss_pred -Hhhhhhhh-hc----hhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEec
Q 003636 452 -WKKFDEKY-HF----SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS 525 (806)
Q Consensus 452 -~~~l~~~y-~~----~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIp 525 (806)
+..+.... .+ ..++..-..+++.|+.|.++|.-.-.-+++.... ...|.+....++.-|.
T Consensus 323 ~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~~IT 388 (778)
T cd04299 323 SRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIGHVT 388 (778)
T ss_pred CHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCceecee
Confidence 11110000 00 0124455678999999999998653322221111 1123443345789999
Q ss_pred CCCCCCCCC-CCchHHHH---------------------------HHhhhcchhhhccCcc---------------cccc
Q 003636 526 PGADMDIYF-PYSEKQKR---------------------------LTALHGSIEQLLFDPE---------------QNDE 562 (806)
Q Consensus 526 nGVD~~~f~-p~~~~~~r---------------------------l~~~~~~i~~~l~~~~---------------~~~~ 562 (806)
||||...|. |..+..-. +...+....+.|.... ..-.
T Consensus 389 NGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~ 468 (778)
T cd04299 389 NGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIG 468 (778)
T ss_pred CCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhh
Confidence 999999887 43222110 0000111111111000 0000
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~ 638 (806)
..+...+++.++|+++.|+..+|+.++++..+.++.+. ...+++|+.|.+.. .|...++.++.+.+++++..
T Consensus 469 ~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p~ 544 (778)
T cd04299 469 EADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRPE 544 (778)
T ss_pred hcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCcC
Confidence 12444478889999999999999999999988777441 13599999998865 45666888889999998777
Q ss_pred CCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECC-
Q 003636 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP- 715 (806)
Q Consensus 639 l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~--~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p- 715 (806)
..++|.|+- .. +..+.+.+-.++|++++||+ +|++|++-+-||.-|.+.+++-.|...|.. +|.|||.|.+
T Consensus 545 ~~~kVvfle----~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 545 FRGRIVFLE----DY-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred CCCcEEEEc----CC-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 788999985 33 45666666668999999999 999999999999999999999999999988 8899999988
Q ss_pred -----------CCHHHHHHHHHHHHH-hhcC-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 716 -----------YHPDQAAELMADFFG-KCKE-----NPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 716 -----------~d~e~la~aI~~~l~-~l~~-----dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
.|.+++-+.|.+.+. ...+ .|..|.+|.+++++.+...|||++++++|.+-
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 566777777765443 2233 38899999999999988899999999999874
No 90
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.75 E-value=2.2e-16 Score=176.52 Aligned_cols=250 Identities=14% Similarity=0.147 Sum_probs=160.7
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCH
Q 003636 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (806)
Q Consensus 405 ~~kPDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 483 (806)
..+||+||++.+.+ +......+++.|+|+++..|.. .|..... . . ....+.+|.|+++|+
T Consensus 83 ~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~------~--~-~~~~~~~d~i~~~~~ 143 (380)
T PRK00025 83 AEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQG------R--A-FKIAKATDHVLALFP 143 (380)
T ss_pred HcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCch------H--H-HHHHHHHhhheeCCc
Confidence 45899999876432 3323344567799988754431 1110000 0 0 113667899999887
Q ss_pred HHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccc
Q 003636 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (806)
Q Consensus 484 ~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (806)
...+. +. ..|+ ++.++.|.+......+..... .+++
T Consensus 144 ~~~~~-------~~-------------~~g~-----~~~~~G~p~~~~~~~~~~~~~-------------------~~~~ 179 (380)
T PRK00025 144 FEAAF-------YD-------------KLGV-----PVTFVGHPLADAIPLLPDRAA-------------------ARAR 179 (380)
T ss_pred cCHHH-------HH-------------hcCC-----CeEEECcCHHHhcccccChHH-------------------HHHH
Confidence 65431 10 0122 255555555332211111111 1234
Q ss_pred cCCCCCCCCCEEE-EEe-cCCcC-CCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CC
Q 003636 564 VGTLSDRSKPIVF-SMA-RLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KL 639 (806)
Q Consensus 564 ~g~l~~~~k~iI~-~vG-RL~~~-Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~l 639 (806)
+|+ ++++++|+ +.| |.... ++++.+++++.++.+..++++++++|+++. ..+++.+.++++ ++
T Consensus 180 l~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~ 246 (380)
T PRK00025 180 LGL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGL 246 (380)
T ss_pred cCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCC
Confidence 665 45666654 444 34444 457899999999987778899999987332 134566666666 55
Q ss_pred CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc-----------------CCcCccc
Q 003636 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-----------------CHGGPAE 702 (806)
Q Consensus 640 ~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt-----------------~~GG~~E 702 (806)
. +.+.. +++..+|+ ++|++|.+| |.+.+|||+||+|+|++ +.++.++
T Consensus 247 ~--v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (380)
T PRK00025 247 E--VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPN 310 (380)
T ss_pred C--eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHH
Confidence 3 55432 36888888 599999997 88899999999999987 5677788
Q ss_pred ccccCC--cEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003636 703 IIEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (806)
Q Consensus 703 iI~dg~--~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v 750 (806)
++.++. .+++.+..|++++++++.+++ +|++.+++|++++.+..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 311 LLAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred HhcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 887764 557777889999999996654 89999999999875444
No 91
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.75 E-value=1.3e-16 Score=176.81 Aligned_cols=259 Identities=14% Similarity=0.127 Sum_probs=170.8
Q ss_pred HHHHHHHHHcCCCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhh
Q 003636 395 DVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~ 473 (806)
.+.+.+.. .+||+||+|... ..+.+.++++..|+|++++.|+... +.... .|... .....+
T Consensus 79 ~l~~~l~~---~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~~------------r~~~~~ 140 (363)
T cd03786 79 GLEAVLLE---EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEEN------------RHAIDK 140 (363)
T ss_pred HHHHHHHH---hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchHH------------HHHHHH
Confidence 34444443 389999999643 3566788888999998876665321 10011 11100 112356
Q ss_pred hCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCC-CCCCCCCCchHHHHHHhhhcchhh
Q 003636 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQ 552 (806)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGV-D~~~f~p~~~~~~rl~~~~~~i~~ 552 (806)
.+|.++++|+...+.+ ...|++ +.|+.+++|++ |...+.+......
T Consensus 141 ~ad~~~~~s~~~~~~l--------------------~~~G~~--~~kI~vign~v~d~~~~~~~~~~~~----------- 187 (363)
T cd03786 141 LSDLHFAPTEEARRNL--------------------LQEGEP--PERIFVVGNTMIDALLRLLELAKKE----------- 187 (363)
T ss_pred HhhhccCCCHHHHHHH--------------------HHcCCC--cccEEEECchHHHHHHHHHHhhccc-----------
Confidence 7899999998876511 123554 78999999985 4332211110000
Q ss_pred hccCccccccccCCCCCCCCCEEEEEecCCc---CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003636 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (806)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~---~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (806)
..++.+|+ ++++.++++.||... .||++.+++++.++.+. ++.+++.|+++. .++
T Consensus 188 ------~~~~~~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~ 245 (363)
T cd03786 188 ------LILELLGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPR 245 (363)
T ss_pred ------hhhhhccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHH
Confidence 00123454 345567788999875 79999999999988653 566766666554 456
Q ss_pred HHHHHHHcCC-CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCC-cCcccccccC
Q 003636 630 MHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG 707 (806)
Q Consensus 630 l~~li~~~~l-~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~-GG~~EiI~dg 707 (806)
+.+.++++++ .++|+|+| .....++..+++ +||++|.||- | ++.|||+||+|||+++. +...+.+.+|
T Consensus 246 l~~~~~~~~~~~~~v~~~~----~~~~~~~~~l~~-~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g 315 (363)
T cd03786 246 IREAGLEFLGHHPNVLLIS----PLGYLYFLLLLK-NADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG 315 (363)
T ss_pred HHHHHHhhccCCCCEEEEC----CcCHHHHHHHHH-cCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee
Confidence 7777788776 67899998 455678888888 4999999984 4 47899999999999964 4456666544
Q ss_pred CcEEEECC-CCHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 003636 708 ASGFHIDP-YHPDQAAELMADFFGKCKENPSHWKKIS 743 (806)
Q Consensus 708 ~~G~li~p-~d~e~la~aI~~~l~~l~~dp~~~~~ms 743 (806)
..+.. .|+++++++|.+++ +|+..+..|.
T Consensus 316 ---~~~~~~~~~~~i~~~i~~ll----~~~~~~~~~~ 345 (363)
T cd03786 316 ---TNVLVGTDPEAILAAIEKLL----SDEFAYSLMS 345 (363)
T ss_pred ---eEEecCCCHHHHHHHHHHHh----cCchhhhcCC
Confidence 33333 36899999996654 7887776653
No 92
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.75 E-value=1.5e-15 Score=160.45 Aligned_cols=290 Identities=17% Similarity=0.242 Sum_probs=202.5
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCccc-C-------CCC-hhhHhhhhhhhhchhhhhHHHHHhhhC
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTK-Y-------PDS-DIYWKKFDEKYHFSCQFTADLIAMNNA 475 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k-~-------~~s-~~~~~~l~~~y~~~~~~~~e~~a~~~A 475 (806)
+..|||.+-....+ +.-...++..++|++.-+|-.--++ . +.+ -+.|.++.-+..|++-. ..+=..|
T Consensus 148 r~~Pdi~IDtMGY~-fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY---~~~G~~a 223 (465)
T KOG1387|consen 148 RFPPDIFIDTMGYP-FSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLY---QSAGSKA 223 (465)
T ss_pred hCCchheEecCCCc-chhHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHH---Hhccccc
Confidence 56899988544332 1222334467899998888421100 0 011 22233332222222211 1234579
Q ss_pred CEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhcc
Q 003636 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLF 555 (806)
Q Consensus 476 D~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~ 555 (806)
|.|+++|.......+..+ + ..++.+|+|..+.+....
T Consensus 224 d~vm~NssWT~nHI~qiW---------------------~--~~~~~iVyPPC~~e~lks-------------------- 260 (465)
T KOG1387|consen 224 DIVMTNSSWTNNHIKQIW---------------------Q--SNTCSIVYPPCSTEDLKS-------------------- 260 (465)
T ss_pred eEEEecchhhHHHHHHHh---------------------h--ccceeEEcCCCCHHHHHH--------------------
Confidence 999999987544322221 1 245678888776652111
Q ss_pred CccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhc------cCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003636 556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (806)
Q Consensus 556 ~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~------~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (806)
..+. ...+.+.++++|.+.|.||.. +++.++-... ..+.++|++||+-.. .+..+..+.
T Consensus 261 -------~~~t-e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~ 325 (465)
T KOG1387|consen 261 -------KFGT-EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKS 325 (465)
T ss_pred -------Hhcc-cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHH
Confidence 0111 145678999999999999998 5554443322 235689999999876 455566788
Q ss_pred HHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcc-ccccc--
Q 003636 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH-- 706 (806)
Q Consensus 630 l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~-EiI~d-- 706 (806)
|+.+++++.++++|.|-- .++.+++..++.. |.+.|..-+.|-||+.|+|+||+|+.+|+.+.||+. +|+.+
T Consensus 326 Lkd~a~~L~i~~~v~F~~----N~Py~~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~ 400 (465)
T KOG1387|consen 326 LKDLAEELKIPKHVQFEK----NVPYEKLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWD 400 (465)
T ss_pred HHHHHHhcCCccceEEEe----cCCHHHHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccC
Confidence 999999999999999987 7899999999995 999999999999999999999999999999999985 55533
Q ss_pred -CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003636 707 -GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (806)
Q Consensus 707 -g~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly 767 (806)
..+||+.+ +.++.|+++.+++. .|++.+..|.++||..+ .+|+-...-+.+.+.+
T Consensus 401 G~~tGFla~--t~~EYaE~iLkIv~---~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 401 GETTGFLAP--TDEEYAEAILKIVK---LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred CccceeecC--ChHHHHHHHHHHHH---cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 45899984 67899999988764 68888999999999887 7888777777776543
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.71 E-value=1.9e-15 Score=183.06 Aligned_cols=319 Identities=14% Similarity=0.125 Sum_probs=210.6
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhh
Q 003636 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (806)
Q Consensus 396 ~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~ 474 (806)
+...+.... ..-|+|-+|+....+++..+.++. ..++.+..|..++ .+.++ +...+...-+..|-.
T Consensus 221 FA~~i~~~~-~~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFP----s~Eif--------r~LP~r~elL~glL~ 287 (934)
T PLN03064 221 FADVVNEHY-EEGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFP----SSEIH--------RTLPSRSELLRSVLA 287 (934)
T ss_pred HHHHHHHhc-CCCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCC----ChHHH--------hhCCcHHHHHHHHhc
Confidence 344444432 234899999999888888887764 5788889997544 22322 112222233457889
Q ss_pred CCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCC--CcEEEecCCCCCCCCCCCch---HHHHHHhhhcc
Q 003636 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYSE---KQKRLTALHGS 549 (806)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~--~k~~VIpnGVD~~~f~p~~~---~~~rl~~~~~~ 549 (806)
||.|=+.|+..+...-..+.+.- ++. ....++.... -++.+.|-|||.+.|..... ...+...+
T Consensus 288 aDlIGFqT~~y~rhFl~~c~rlL-----g~~---~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~l--- 356 (934)
T PLN03064 288 ADLVGFHTYDYARHFVSACTRIL-----GLE---GTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL--- 356 (934)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHh-----Ccc---ccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHH---
Confidence 99999999876542211111100 000 0011222111 24668899999988864321 11111111
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCe----EEEEEeCcCCCCCCcchHHHH
Q 003636 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIA 625 (806)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~~ 625 (806)
++.+ .++.+|++++|++..||+...+.||.++.+.+|++ .|+-|..... ..-.+..+
T Consensus 357 -----------r~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr---~~v~eY~~ 417 (934)
T PLN03064 357 -----------KERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTR---TDVPEYQK 417 (934)
T ss_pred -----------HHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCC---CCcHHHHH
Confidence 1112 35679999999999999999999999988777765 3444432211 11122333
Q ss_pred HHHHHHHHHHHcC----CCC--cEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC----CEEEc
Q 003636 626 EIEKMHELMKTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PTFAT 695 (806)
Q Consensus 626 ~~~~l~~li~~~~----l~~--~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~Gl----PVVAt 695 (806)
...++.+++.+.+ -.+ -|+++. ..++.+++..+|+ .||+||+||..||++++..|||+|+. +.|.|
T Consensus 418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 418 LTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 3444555554432 111 144443 2478999999999 59999999999999999999999954 44459
Q ss_pred CCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003636 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLA 767 (806)
Q Consensus 696 ~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly 767 (806)
.++|.++.+ +..+++++|.|.+++|++|.+++. -+++.+++..+..++++ ..+||...++.+++-.
T Consensus 494 EfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 494 EFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSEL 559 (934)
T ss_pred CCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHH
Confidence 999998888 556899999999999999988763 38889999999999998 7799999999976643
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.66 E-value=1.4e-14 Score=168.23 Aligned_cols=170 Identities=12% Similarity=0.176 Sum_probs=146.8
Q ss_pred CCCEEEEEe--cCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC--------
Q 003636 571 SKPIVFSMA--RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD-------- 640 (806)
Q Consensus 571 ~k~iI~~vG--RL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~-------- 640 (806)
.+..+++++ || +.|.++.+++++.+.....|++.|.+.|-+.+ ....+.++++++++++.
T Consensus 318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 318 LYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred ccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 344678888 99 99999999999999999999999999998853 01245666777777665
Q ss_pred ---------------------CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcC
Q 003636 641 ---------------------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (806)
Q Consensus 641 ---------------------~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG 699 (806)
++|.|.|++ ...++.+.+.. +.++|.+|..|+|+ +.+||++.|+|+| .-|
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~----~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg 458 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLT----NEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKV 458 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecC----CHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecC
Confidence 799999943 44588899996 89999999999999 9999999999999 667
Q ss_pred cccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 700 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 700 ~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
+.++|.||+||+++ +|.++++++|..++ .+++.|++++..+.+.+ ++||-+.++++|.++
T Consensus 459 ~~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 459 ETDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred CceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 89999999999999 69999999997765 89999999999999998 889999999988775
No 95
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.62 E-value=3.4e-14 Score=162.03 Aligned_cols=329 Identities=15% Similarity=0.168 Sum_probs=180.1
Q ss_pred Cce-EEEEcCCCchHHHHHHHH-HcCCcEEEEecCCCcccCC---------C-ChhhHhhhhhhhhchhhhhHHHHHhhh
Q 003636 407 FPD-FIIGNYSDGNLVASLLAY-KMGITQCTIAHALEKTKYP---------D-SDIYWKKFDEKYHFSCQFTADLIAMNN 474 (806)
Q Consensus 407 kPD-lIh~h~~~~~lva~lla~-~lgvp~v~t~H~l~~~k~~---------~-s~~~~~~l~~~y~~~~~~~~e~~a~~~ 474 (806)
++. +.|+|-|.++.-..++.+ ...|..|+|.|+.-..++. . ....+......+....+...|+.+...
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 444 459999988654443333 2457789999995322221 0 111122333334444455678889999
Q ss_pred CCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHH----HHhhhcch
Q 003636 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR----LTALHGSI 550 (806)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~r----l~~~~~~i 550 (806)
||...|+|+-.+.+++..++ ...=.|+|||.|.+.|....+-.+. ..++++-.
T Consensus 222 AdvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv 278 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFV 278 (633)
T ss_dssp SSEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHH
Confidence 99999999876654332221 1122488999999877555432221 22222223
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEecCC-cCCCHHHHHHHHHHhhc----cCCC---eEEEEEeCcCCCCCCcchH
Q 003636 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQ----LREL---VNLVVVAGYIDVNKSKDRE 622 (806)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~-~~Kgi~~Llea~~~l~~----~~~~---v~LvIVG~g~~~~~~~d~e 622 (806)
...+++..+ + ..++..+|++.||.+ +.||+|.++||++++.. ...+ +-|+|+=.... +.+.|
T Consensus 279 ~~~f~g~~d------f-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~---~~~ve 348 (633)
T PF05693_consen 279 RGHFYGHYD------F-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTN---SFNVE 348 (633)
T ss_dssp HHHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEE---EE-HH
T ss_pred HHHhcccCC------C-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccC---CcCHH
Confidence 334444322 2 124567799999999 68999999999999853 1222 33445432211 22222
Q ss_pred HHH----------------------------------------------------------------------HHHHHHH
Q 003636 623 EIA----------------------------------------------------------------------EIEKMHE 632 (806)
Q Consensus 623 e~~----------------------------------------------------------------------~~~~l~~ 632 (806)
... ..+.+-.
T Consensus 349 ~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn 428 (633)
T PF05693_consen 349 SLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILN 428 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHH
Confidence 111 0111222
Q ss_pred HHHHcCCC----Cc--EEEccc---ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccc
Q 003636 633 LMKTYKLD----GQ--FRWIAA---QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI 703 (806)
Q Consensus 633 li~~~~l~----~~--V~flG~---~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~Ei 703 (806)
.+++.++. ++ |.|... .++.+-+-+.+.++. .+|+.|+||+||++|.|.+|+.++|+|+|.|+..|....
T Consensus 429 ~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~-GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~ 507 (633)
T PF05693_consen 429 MIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVR-GCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCW 507 (633)
T ss_dssp HHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHH-HSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHH
T ss_pred HHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhc-cCceeeeccccccccCChHHHhhcCCceeeccchhHHHH
Confidence 23333331 22 344431 223344556777888 599999999999999999999999999999999998766
Q ss_pred ccc-----CCcEEEE-C--CCCHHHHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 704 IEH-----GASGFHI-D--PYHPDQAAELMADFFGKCK-ENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 704 I~d-----g~~G~li-~--p~d~e~la~aI~~~l~~l~-~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
+.+ ...|+.+ + -.+.++.++.|.+++.... .++..+..+..++. ++.+..+|+.....|.+.|...
T Consensus 508 ~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae-~LS~~~dW~~~~~yY~~Ay~~A 582 (633)
T PF05693_consen 508 MQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAE-RLSDLADWKNFGKYYEKAYDLA 582 (633)
T ss_dssp HHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHH-HHGGGGBHHHHCHHHHHHHHHH
T ss_pred HHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHHH
Confidence 643 3456654 3 3467777777776665443 35556666666665 4558899999999999987644
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.56 E-value=6.8e-15 Score=139.84 Aligned_cols=130 Identities=21% Similarity=0.321 Sum_probs=96.3
Q ss_pred CCEEEEEecCCcCCCHHHHHH-HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003636 572 KPIVFSMARLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (806)
Q Consensus 572 k~iI~~vGRL~~~Kgi~~Lle-a~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~ 650 (806)
.++|+++|++.+.|+++.+++ ++.++.+..|++.|+|+|++++ ++.++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 367999999999999999999 9999998889999999999765 13333 235899999
Q ss_pred CcCChHHHHHHHHccCcEEEECCC-CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHH
Q 003636 651 NRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (806)
Q Consensus 651 ~~~~~~el~~~la~aaDifV~PS~-~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l 729 (806)
.+ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 44 589999995 999999985 67899999999999999999988 677777666678888 889999999997765
No 97
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=2.2e-12 Score=136.99 Aligned_cols=378 Identities=13% Similarity=0.118 Sum_probs=231.1
Q ss_pred HHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHH
Q 003636 320 LLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 399 (806)
Q Consensus 320 a~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ 399 (806)
|..|++.|++|+ ++.-.- ..+.+.+-..++++|+.+|-.+..... .+.-.. -+..|.+-+.-.
T Consensus 33 A~Sla~~gf~Vd----liGy~~--------s~p~e~l~~hprI~ih~m~~l~~~~~~----p~~~~l-~lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVE--------SIPLEELLNHPRIRIHGMPNLPFLQGG----PRVLFL-PLKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecC--------CCChHHHhcCCceEEEeCCCCcccCCC----chhhhh-HHHHHHHHHHHH
Confidence 456899999999 554221 113344445567888887765532211 111111 112222222111
Q ss_pred HHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCCcc-cCCCChhhHhhhhhhhhchhhhhHHHHHhhhC
Q 003636 400 ITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKT-KYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (806)
Q Consensus 400 i~~~~~~kPDlIh~h~~~~---~lva~lla~~lgvp~v~t~H~l~~~-k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~A 475 (806)
+.-...+.||+|....+++ -.++.+.+...|.++++..|+...+ .. .......... ..+..+.|...=+.|
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l---~~~~g~~h~l--V~l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQL---KLKLGFQHPL--VRLVRWLEKYFGKLA 170 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHH---HhhcCCCCch--HHHHHHHHHHhhccc
Confidence 1111256899998877765 4567777788899999999987543 10 0000000010 111223466677789
Q ss_pred CEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecC-----CCCCCC----CCCCchH----HHH
Q 003636 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-----GADMDI----YFPYSEK----QKR 542 (806)
Q Consensus 476 D~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpn-----GVD~~~----f~p~~~~----~~r 542 (806)
|.-.|+|....+...+.+|.- +..|++. +.+.+. |.+.... ..|
T Consensus 171 ~~nLcVT~AMr~dL~qnWgi~-----------------------ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar 227 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWGIN-----------------------RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAR 227 (444)
T ss_pred ccchhhHHHHHHHHHHhcCCc-----------------------eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhc
Confidence 999999988765444443311 1111110 111110 1111100 000
Q ss_pred HHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhh-------ccCCCeEEEEEeCcCCC
Q 003636 543 LTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-------QLRELVNLVVVAGYIDV 615 (806)
Q Consensus 543 l~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~-------~~~~~v~LvIVG~g~~~ 615 (806)
....+.++...|..-+....... ......++++.-..++..++..|++|+..-. ...|.+-++|.|.||.
T Consensus 228 -~~q~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl- 304 (444)
T KOG2941|consen 228 -EPQDKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL- 304 (444)
T ss_pred -ccccchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-
Confidence 00011222222221111010111 1233446777788999999999999987331 2347788899999998
Q ss_pred CCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEE--CCC-CCCCcHHHHHHHHcCCCE
Q 003636 616 NKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ--PAF-YEAFGLTVVEAMTCGLPT 692 (806)
Q Consensus 616 ~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~--PS~-~E~fGltvlEAMa~GlPV 692 (806)
.++..+.++++++. +|.+.- .....++....++ ++|..|. +|. -=..|++|+....||+||
T Consensus 305 -----------kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPv 368 (444)
T KOG2941|consen 305 -----------KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 368 (444)
T ss_pred -----------hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCce
Confidence 67788889988875 466543 3667778888888 5988775 333 234789999999999999
Q ss_pred EEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003636 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (806)
Q Consensus 693 VAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 765 (806)
+|-+..-+.|+|+||+||++|+ |.+++|+.|..++...-+|.+..+++.+++++. +.+.|+...++...
T Consensus 369 cA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~~ 437 (444)
T KOG2941|consen 369 CAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTAL 437 (444)
T ss_pred eeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhhh
Confidence 9999999999999999999997 899999999888876677999999999999987 55678776655543
No 98
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.49 E-value=3.8e-12 Score=143.51 Aligned_cols=249 Identities=16% Similarity=0.117 Sum_probs=152.9
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCH
Q 003636 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (806)
Q Consensus 405 ~~kPDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 483 (806)
..+||+|++....+ ++.....++.+|+|+++.+. .+- ..|... .-+...+.+|.|+++++
T Consensus 87 ~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~~-------waw~~~-----------~~r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 87 QAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQV-------WAWRKW-----------RAKKIEKATDFLLAILP 147 (385)
T ss_pred hcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-CcH-------hhcCcc-----------hHHHHHHHHhHhhccCC
Confidence 45999999887644 55555688889999875331 111 112111 02234668899999887
Q ss_pred HHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCC-CchHHHHHHhhhcchhhhccCcccccc
Q 003636 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP-YSEKQKRLTALHGSIEQLLFDPEQNDE 562 (806)
Q Consensus 484 ~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p-~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (806)
.+.+. +. .. ..+..++.|++-.+.... ...... ++
T Consensus 148 ~e~~~-------------------~~-~~-----g~~~~~vGnPv~~~~~~~~~~~~~~-------------------r~ 183 (385)
T TIGR00215 148 FEKAF-------------------YQ-KK-----NVPCRFVGHPLLDAIPLYKPDRKSA-------------------RE 183 (385)
T ss_pred CcHHH-------------------HH-hc-----CCCEEEECCchhhhccccCCCHHHH-------------------HH
Confidence 76441 11 01 124556777763332211 111111 23
Q ss_pred ccCCCCCCCCCEEEEEe--cCCc-CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003636 563 HVGTLSDRSKPIVFSMA--RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vG--RL~~-~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l 639 (806)
.+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.... ..+.+.++.++++.
T Consensus 184 ~lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~ 250 (385)
T TIGR00215 184 KLGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGP 250 (385)
T ss_pred HcCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCC
Confidence 4666 56778777663 7776 7899999999999988788999877654422 13345566666666
Q ss_pred CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcC-----------------ccc
Q 003636 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-----------------PAE 702 (806)
Q Consensus 640 ~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG-----------------~~E 702 (806)
..+|.+.+ ++...+|+ ++|++|.+| |.+.+|||+||+|+|.+.-.. .+.
T Consensus 251 ~~~v~~~~--------~~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~n 316 (385)
T TIGR00215 251 DLQLHLID--------GDARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPN 316 (385)
T ss_pred CCcEEEEC--------chHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccH
Confidence 66677664 13556777 599999999 888889999999999982111 222
Q ss_pred ccccCCcEE-EE-CCCCHHHHHHHHHHHHHhhcCCH----HHHHHHHHHHH
Q 003636 703 IIEHGASGF-HI-DPYHPDQAAELMADFFGKCKENP----SHWKKISDGGL 747 (806)
Q Consensus 703 iI~dg~~G~-li-~p~d~e~la~aI~~~l~~l~~dp----~~~~~ms~~ar 747 (806)
++.+..... ++ +.-+++.+++.+.++ +.|+ +.++++.+.-.
T Consensus 317 il~~~~~~pel~q~~~~~~~l~~~~~~l----l~~~~~~~~~~~~~~~~~~ 363 (385)
T TIGR00215 317 ILANRLLVPELLQEECTPHPLAIALLLL----LENGLKAYKEMHRERQFFE 363 (385)
T ss_pred HhcCCccchhhcCCCCCHHHHHHHHHHH----hcCCcccHHHHHHHHHHHH
Confidence 232221111 12 223577888888554 4788 87777665443
No 99
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.34 E-value=6.1e-12 Score=112.41 Aligned_cols=92 Identities=26% Similarity=0.498 Sum_probs=85.0
Q ss_pred EEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003636 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (806)
Q Consensus 668 ifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar 747 (806)
+++.|+..++++..++|+||||+|+|++..++..+++.+|..++.++ |++++.++|..+ ++||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l----l~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL----LENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH----HCCHHHHHHHHHHHH
Confidence 45678888999999999999999999999999999999999999997 999999999654 489999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 003636 748 KRIYERYTWKIYSERLMT 765 (806)
Q Consensus 748 ~~v~~~ysw~~~a~~ll~ 765 (806)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999863
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.31 E-value=3.8e-10 Score=129.80 Aligned_cols=321 Identities=14% Similarity=0.131 Sum_probs=180.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhh
Q 003636 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~ 473 (806)
.....+... -..-|+|-.|+..-.+++.++.++. ..++.+..|..++. ++. ++...+...-+..|-
T Consensus 130 ~FA~~i~~~-~~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs----~e~--------fr~lP~r~eiL~glL 196 (474)
T PF00982_consen 130 RFADAIAEV-YRPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPS----SEI--------FRCLPWREEILRGLL 196 (474)
T ss_dssp HHHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHH--------HTTSTTHHHHHHHHT
T ss_pred HHHHHHHHh-CcCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCC----HHH--------HhhCCcHHHHHHHhh
Confidence 334444443 2367899999999888888887764 57788899975442 221 111112222345788
Q ss_pred hCCEEEecCHHHHhhcccccccccccccccccccceeec-cCCCC--CCcEEEecCCCCCCCCCCCch---HHHHHHhhh
Q 003636 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVH-GIDVF--DPKFNIVSPGADMDIYFPYSE---KQKRLTALH 547 (806)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~-Gi~v~--~~k~~VIpnGVD~~~f~p~~~---~~~rl~~~~ 547 (806)
.||.|-+.|+..+...-..+.+. ++.-+.... ++... .-++.+.|-|||.+.|..... ...+...+
T Consensus 197 ~aDlIgFqt~~~~~nFl~~~~r~-------lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l- 268 (474)
T PF00982_consen 197 GADLIGFQTFEYARNFLSCCKRL-------LGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEEL- 268 (474)
T ss_dssp TSSEEEESSHHHHHHHHHHHHHH-------S-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHH-
T ss_pred cCCEEEEecHHHHHHHHHHHHHH-------cCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHH-
Confidence 99999999987655322222111 000000000 11111 225778899999877642111 11111111
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHH
Q 003636 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREE 623 (806)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee 623 (806)
++.++ .+..+|+.+.|+|..||+..=+.||.++.+.+| .+.|+-++.... +...+.
T Consensus 269 -------------~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr---~~~~~y 328 (474)
T PF00982_consen 269 -------------REKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR---EDVPEY 328 (474)
T ss_dssp -------------HHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S---TTSHHH
T ss_pred -------------HHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC---ccchhH
Confidence 11121 224899999999999999999999998866555 578887876433 333334
Q ss_pred HHHHHHHHHHHHH----cCCCC--cEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCC----EE
Q 003636 624 IAEIEKMHELMKT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TF 693 (806)
Q Consensus 624 ~~~~~~l~~li~~----~~l~~--~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlP----VV 693 (806)
.+..+++.+++.+ +|-.+ -|.++- ..++.+++..+|+ .||+++.+|..+|.-++..|+.+|-.+ +|
T Consensus 329 ~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~-~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLi 404 (474)
T PF00982_consen 329 QELRREVEELVGRINGKYGTPDWTPIIYIY---RSLSFEELLALYR-AADVALVTSLRDGMNLVAKEYVACQDDNPGVLI 404 (474)
T ss_dssp HHHHHHHHHHHHHHHHHH-BTTB-SEEEE----S---HHHHHHHHH-H-SEEEE--SSBS--HHHHHHHHHS-TS--EEE
T ss_pred HHHHHHHHHHHHHHHhhcccCCceeEEEEe---cCCCHHHHHHHHH-hhhhEEecchhhccCCcceEEEEEecCCCCceE
Confidence 4555566666553 44332 355554 2678999999999 599999999999999999999999766 77
Q ss_pred EcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 694 At~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
.|...|.++.+.++ .++++|.|.+++|++|.++++ -+++.++...+.-++.+ ..+|-...++++++-
T Consensus 405 LSefaGaa~~L~~~--al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 471 (474)
T PF00982_consen 405 LSEFAGAAEQLSEA--ALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRD 471 (474)
T ss_dssp EETTBGGGGT-TTS---EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHH
T ss_pred eeccCCHHHHcCCc--cEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHH
Confidence 88888988888442 489999999999999998774 46667777777777777 678888888887764
No 101
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.26 E-value=3.3e-11 Score=117.93 Aligned_cols=167 Identities=16% Similarity=0.143 Sum_probs=85.5
Q ss_pred CCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCccccccc
Q 003636 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 378 (806)
Q Consensus 299 p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~ 378 (806)
+..||.+.++. +|+++|+++||+|+ ++|....+..... ............
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~------------~~~~~~~~~~~~------ 58 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE------------LVKIFVKIPYPI------ 58 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST------------EEEE---TT-SS------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh------------ccceeeeeeccc------
Confidence 45799999999 77777899999999 8877644332111 011111111100
Q ss_pred ccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcc--cCCCChhhHhhhh
Q 003636 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKT--KYPDSDIYWKKFD 456 (806)
Q Consensus 379 ~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~--k~~~s~~~~~~l~ 456 (806)
.....+.......+.+.+.+. +||+||+|.+.....+.+..+ ++|.|.+.|+.... ...........+.
T Consensus 59 ----~~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~~ 129 (177)
T PF13439_consen 59 ----RKRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSKLSPYSYLN 129 (177)
T ss_dssp ----TSS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTSCCCHHHHH
T ss_pred ----ccccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccccchhhhhh
Confidence 001111112333455555544 999999998766444444444 99999999986521 1000000000000
Q ss_pred hhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCC
Q 003636 457 EKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (806)
Q Consensus 457 ~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~ 534 (806)
........+.+|.||++|...++... . .|++ +.|+.|||||||++.|.
T Consensus 130 --------~~~~~~~~~~~~~ii~vS~~~~~~l~-------------------~-~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 130 --------FRIERKLYKKADRIIAVSESTKDELI-------------------K-FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp --------HCTTHHHHCCSSEEEESSHHHHHHHH-------------------H-HT----SS-EEE----B-CCCH-
T ss_pred --------hhhhhhHHhcCCEEEEECHHHHHHHH-------------------H-hCCc--ccCCEEEECCccHHHcC
Confidence 01123347899999999998776221 1 2444 78999999999998873
No 102
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.25 E-value=2.1e-11 Score=117.29 Aligned_cols=160 Identities=18% Similarity=0.256 Sum_probs=85.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCcccccccccc
Q 003636 302 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWIS 381 (806)
Q Consensus 302 GG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~is 381 (806)
||.+.++. +|+++|.++||+|+ |+|...+... .... ..++.+.++|.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchh------
Confidence 79999999 77777899999999 9886643321 1111 23588888887654210
Q ss_pred cCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhc
Q 003636 382 RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHF 461 (806)
Q Consensus 382 r~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~ 461 (806)
...+. +...+.+.+ .....+||+||+|++..++++.++++..++|+|+++|+...... ..|.. .+
T Consensus 54 -~~~~~----~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~-----~~ 118 (160)
T PF13579_consen 54 -LRLLR----FLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKR-----RL 118 (160)
T ss_dssp -GGHCC----HHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH-----HH
T ss_pred -hhhHH----HHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchhh-----HH
Confidence 00111 122233333 22367999999999766777777776889999999997532111 11110 01
Q ss_pred hhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCC
Q 003636 462 SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 527 (806)
Q Consensus 462 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnG 527 (806)
. ...++..++.||.|+++|+..++. +.. .|++ ++|+.|||||
T Consensus 119 ~--~~~~~~~~~~ad~vi~~S~~~~~~-------------------l~~-~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 119 Y--RWLERRLLRRADRVIVVSEAMRRY-------------------LRR-YGVP--PDRIHVIPNG 160 (160)
T ss_dssp H--HHHHHHHHHH-SEEEESSHHHHHH-------------------HHH-H-----GGGEEE----
T ss_pred H--HHHHHHHHhcCCEEEECCHHHHHH-------------------HHH-hCCC--CCcEEEeCcC
Confidence 1 123667899999999999988762 111 3444 7899999998
No 103
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.22 E-value=2.8e-09 Score=121.59 Aligned_cols=322 Identities=12% Similarity=0.067 Sum_probs=209.1
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhh
Q 003636 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (806)
Q Consensus 396 ~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~-lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~ 474 (806)
+...+.... ..-|+|-.|+....+++..+.++ ...++.+..|..++ .++++. . ..+...-...|-.
T Consensus 113 FA~~v~~~~-~~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFP----s~eifr-~-------LP~r~eil~glL~ 179 (474)
T PRK10117 113 LADKLLPLL-KDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFP----TPEIFN-A-------LPPHDELLEQLCD 179 (474)
T ss_pred HHHHHHHhc-CCCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCC----ChHHHh-h-------CCChHHHHHHHHh
Confidence 333444432 24489999999988888877665 34678888897544 233221 1 1111223446889
Q ss_pred CCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchH--HHHHHhhhcchhh
Q 003636 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK--QKRLTALHGSIEQ 552 (806)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~--~~rl~~~~~~i~~ 552 (806)
+|.|=+.|+......-+.+.+..... ...+......|- .-++.+.|-|||.+.|...... ..+...
T Consensus 180 aDlIGFqt~~y~rnFl~~~~~~lg~~--~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~~~~~~------- 247 (474)
T PRK10117 180 YDLLGFQTENDRLAFLDCLSNLTRVT--TRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLPPKLAQ------- 247 (474)
T ss_pred CccceeCCHHHHHHHHHHHHHHcCCc--ccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHHHHHHH-------
Confidence 99999999876653222221110000 000000000110 2257788999998877432111 111111
Q ss_pred hccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHH
Q 003636 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIE 628 (806)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~ 628 (806)
.++.+ .++.+|+.+.|+|..||+..=++||.++.+.+| ++.|+-++.. +.+.-.+..+...
T Consensus 248 -------lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~l~~ 312 (474)
T PRK10117 248 -------LKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQDIRH 312 (474)
T ss_pred -------HHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHHHHH
Confidence 11112 356799999999999999999999999877666 5678877642 2233334445555
Q ss_pred HHHHHHHHc----CCCC--cEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-----CEEEcCC
Q 003636 629 KMHELMKTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCH 697 (806)
Q Consensus 629 ~l~~li~~~----~l~~--~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~Gl-----PVVAt~~ 697 (806)
++.+++.+. |-.+ -|+++- ..++.+++..+|+ +||+++.++..+|.-|+..|+.+|-. +.|.|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef 388 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecc
Confidence 666666543 2222 244443 4678999999999 59999999999999999999999965 3888999
Q ss_pred cCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 698 GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 698 GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
.|.++.+. ..++++|.|.+++|++|.+++. -.++.+++--+..++.+ .++|....++.+++-..
T Consensus 389 AGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 389 AGAANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred cchHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 99888883 3789999999999999998874 46666666666677777 67798888888877443
No 104
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.21 E-value=1.2e-08 Score=113.73 Aligned_cols=248 Identities=15% Similarity=0.114 Sum_probs=140.9
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHH
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 484 (806)
+.+||+||++....+..+.++++.+++|+++.-.+... -.+.++..+.||.|.++-+.
T Consensus 89 ~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~----------------------g~~nr~~~~~a~~v~~~f~~ 146 (352)
T PRK12446 89 KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP----------------------GLANKIALRFASKIFVTFEE 146 (352)
T ss_pred hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc----------------------cHHHHHHHHhhCEEEEEccc
Confidence 55999999987777777788999999998653222100 01234567788888765432
Q ss_pred HHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccccc
Q 003636 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (806)
Q Consensus 485 ~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (806)
... +++ ..|+.++-|.|..+...+..... ++.+
T Consensus 147 ~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~~~~--------------------~~~~ 179 (352)
T PRK12446 147 AAK-------------------------HLP--KEKVIYTGSPVREEVLKGNREKG--------------------LAFL 179 (352)
T ss_pred hhh-------------------------hCC--CCCeEEECCcCCcccccccchHH--------------------HHhc
Confidence 111 222 45777777777665432221111 1235
Q ss_pred CCCCCCCCCEEEEEecCCcCCCHHH-HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003636 565 GTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (806)
Q Consensus 565 g~l~~~~k~iI~~vGRL~~~Kgi~~-Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V 643 (806)
|+ ++++++|+.+|.=.-.+.+.. +.+++..+. .+++++++-|..+ +.+....+ .++
T Consensus 180 ~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~~---------------~~~~~~~~---~~~ 236 (352)
T PRK12446 180 GF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKGN---------------LDDSLQNK---EGY 236 (352)
T ss_pred CC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCch---------------HHHHHhhc---CCc
Confidence 54 566777777765444455533 334455443 2477666554322 11111111 123
Q ss_pred EEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCc-----C----cccccccCCcEEEEC
Q 003636 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-----G----PAEIIEHGASGFHID 714 (806)
Q Consensus 644 ~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~G-----G----~~EiI~dg~~G~li~ 714 (806)
...++. .+++..+|+ +||++|.= +-+.|+.|++++|+|.|..... + .++.+.+.+.|..+.
T Consensus 237 ~~~~f~-----~~~m~~~~~-~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~ 306 (352)
T PRK12446 237 RQFEYV-----HGELPDILA-ITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLY 306 (352)
T ss_pred EEecch-----hhhHHHHHH-hCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcc
Confidence 334422 246778888 59998874 3478899999999999988432 1 233445555676664
Q ss_pred CC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 715 PY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 715 p~--d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
.. +++.+++++.++ ++|++.+++ ++ +++.....++++.++
T Consensus 307 ~~~~~~~~l~~~l~~l----l~~~~~~~~---~~-----~~~~~~~aa~~i~~~ 348 (352)
T PRK12446 307 EEDVTVNSLIKHVEEL----SHNNEKYKT---AL-----KKYNGKEAIQTIIDH 348 (352)
T ss_pred hhcCCHHHHHHHHHHH----HcCHHHHHH---HH-----HHcCCCCHHHHHHHH
Confidence 32 467777777554 478766532 21 334555555555544
No 105
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.14 E-value=7e-08 Score=107.49 Aligned_cols=240 Identities=17% Similarity=0.209 Sum_probs=150.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHH
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 484 (806)
..+||+|++........+.++++.+|+|+++.-.+... ...|+ +..+.|+.|.+.-..
T Consensus 89 ~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank----------------~~~~~a~~V~~~f~~ 146 (357)
T COG0707 89 KLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK----------------ILSKFAKKVASAFPK 146 (357)
T ss_pred HcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH----------------HhHHhhceeeecccc
Confidence 34999999988777777788889999999875554322 12232 234566666543321
Q ss_pred HHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCcccccccc
Q 003636 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (806)
Q Consensus 485 ~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~ 564 (806)
.. .+.+ +.++.++-|.+..+... ......+. .
T Consensus 147 -~~------------------------~~~~--~~~~~~tG~Pvr~~~~~-~~~~~~~~--------------------~ 178 (357)
T COG0707 147 -LE------------------------AGVK--PENVVVTGIPVRPEFEE-LPAAEVRK--------------------D 178 (357)
T ss_pred -cc------------------------ccCC--CCceEEecCcccHHhhc-cchhhhhh--------------------h
Confidence 00 1222 56788888888776654 22222111 1
Q ss_pred CCCCCCCCCEEEEEecCCcCCCHHHHH-HHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003636 565 GTLSDRSKPIVFSMARLDHVKNMTGLV-ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (806)
Q Consensus 565 g~l~~~~k~iI~~vGRL~~~Kgi~~Ll-ea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V 643 (806)
+ ..++++|+.+|.=--.+.+..++ ++..++.+ +++++...+... .+++...-.+++. +
T Consensus 179 ~---~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~---~~~v~~~~G~~~------------~~~~~~~~~~~~~---~ 237 (357)
T COG0707 179 G---RLDKKTILVTGGSQGAKALNDLVPEALAKLAN---RIQVIHQTGKND------------LEELKSAYNELGV---V 237 (357)
T ss_pred c---cCCCcEEEEECCcchhHHHHHHHHHHHHHhhh---CeEEEEEcCcch------------HHHHHHHHhhcCc---E
Confidence 1 12677777666543333344443 33334433 577776666543 3344444444443 7
Q ss_pred EEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCc--------ccccccCCcEEEECC
Q 003636 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP--------AEIIEHGASGFHIDP 715 (806)
Q Consensus 644 ~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~--------~EiI~dg~~G~li~p 715 (806)
+..++. .++..+|+ ++|++|.= +=++|+-|..++|+|+|--..+.. +..+++.+.|.+++-
T Consensus 238 ~v~~f~------~dm~~~~~-~ADLvIsR----aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~ 306 (357)
T COG0707 238 RVLPFI------DDMAALLA-AADLVISR----AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQ 306 (357)
T ss_pred EEeeHH------hhHHHHHH-hccEEEeC----CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecc
Confidence 777643 35888888 49999864 447999999999999998754433 334556667777764
Q ss_pred CC--HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003636 716 YH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (806)
Q Consensus 716 ~d--~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v 750 (806)
.+ ++.+++.|.+++ ++|+..++|++++++..
T Consensus 307 ~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 307 SELTPEKLAELILRLL----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred ccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 44 778888886554 89999999999998764
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.14 E-value=1.5e-08 Score=124.11 Aligned_cols=311 Identities=14% Similarity=0.129 Sum_probs=203.6
Q ss_pred eEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHh
Q 003636 409 DFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (806)
Q Consensus 409 DlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (806)
|+|-.|.....+++..+.++. ..++.+..|..++ .+.++ +...+...-+..|-.||.|=+.|+..+.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFP----s~eif--------r~LP~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP----SSEIY--------KTLPIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCC----ChHHH--------hhCCcHHHHHHHHhcCCeEEecCHHHHH
Confidence 899999999888888887764 5778889997544 23322 1222223334578899999999987655
Q ss_pred hcccccccccccccccccccceeeccCCCC--CCcEEEecCCCCCCCCCCC---chHHHHHHhhhcchhhhccCcccccc
Q 003636 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMDIYFPY---SEKQKRLTALHGSIEQLLFDPEQNDE 562 (806)
Q Consensus 488 ~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~--~~k~~VIpnGVD~~~f~p~---~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (806)
.--..+.+.-.. ..... +...|+... .-++.+.|-|||...|... ++...+...+ ++
T Consensus 271 ~Fl~~~~r~lgl-~~~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l--------------~~ 332 (854)
T PLN02205 271 HFLSCCSRMLGL-SYESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKEL--------------IK 332 (854)
T ss_pred HHHHHHHHHhCC-cccCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHH--------------HH
Confidence 222211111000 00000 000112111 2257788999998876432 1111122111 12
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY- 637 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~- 637 (806)
.++ ++++.+|+.+.|+|..||+..=+.||.++.+.+|+ +.|+-+..... +.-.+..+...++.+++.+.
T Consensus 333 ~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr---~~~~~y~~~~~ev~~~v~rIN 406 (854)
T PLN02205 333 QFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR---GKGKDVKEVQAETHSTVKRIN 406 (854)
T ss_pred Hhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cccHHHHHHHHHHHHHHHHHH
Confidence 222 24678999999999999999999999999877775 57777765432 22334445555666666543
Q ss_pred ---CCCC--cEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-------------------CEE
Q 003636 638 ---KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-------------------PTF 693 (806)
Q Consensus 638 ---~l~~--~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~Gl-------------------PVV 693 (806)
|-.+ .|+++- ..++.+++..+|+ .||+++.++..+|.-|+..|+.+|-. ..|
T Consensus 407 ~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLi 482 (854)
T PLN02205 407 ETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLV 482 (854)
T ss_pred hhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccccccccccCCCCceE
Confidence 3222 356654 3678999999999 59999999999999999999999854 377
Q ss_pred EcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 694 At~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
.|.+.|.+..+. ..++++|.|.+++|++|.+++. .+++.++.--+.-++++ ..+|-...++.++.-
T Consensus 483 LSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~ 548 (854)
T PLN02205 483 VSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGYWARSFLQD 548 (854)
T ss_pred eeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 788888777763 3689999999999999998874 35555555556667777 677888777776653
No 107
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.07 E-value=1.9e-08 Score=114.95 Aligned_cols=143 Identities=12% Similarity=0.139 Sum_probs=110.6
Q ss_pred CCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003636 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (806)
Q Consensus 572 k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~ 651 (806)
+.-+++++. +..++++.++.+..|++.|-| |.+.+ ...+|.++ +++ ++.+.+.|+..
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~~- 338 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNITT- 338 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcCh-
Confidence 344666661 899999999999999999999 66544 12567777 666 66677777432
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCC-cCcccccccCCcEEEECCCCHHHHHHHHHHHHH
Q 003636 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (806)
Q Consensus 652 ~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~-GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~ 730 (806)
..+-+.+. .||+++..|..|+|++++.||++.|+|+|+.+. -|+.+++.+ |.+++.+|+++++++|.+++
T Consensus 339 ----~~l~~ly~-~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL- 409 (438)
T TIGR02919 339 ----QKIQELYQ-TCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL- 409 (438)
T ss_pred ----HHHHHHHH-hccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh-
Confidence 35666666 599999999999999999999999999999854 467788866 88999999999999997665
Q ss_pred hhcCCHHHHHHHHHHHHHH
Q 003636 731 KCKENPSHWKKISDGGLKR 749 (806)
Q Consensus 731 ~l~~dp~~~~~ms~~ar~~ 749 (806)
.||+.+++.-..-++.
T Consensus 410 ---~d~~~~~~~~~~q~~~ 425 (438)
T TIGR02919 410 ---NDPNQFRELLEQQREH 425 (438)
T ss_pred ---cCHHHHHHHHHHHHHH
Confidence 8998776644443333
No 108
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.05 E-value=6.8e-08 Score=109.96 Aligned_cols=322 Identities=14% Similarity=0.115 Sum_probs=204.3
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhh
Q 003636 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~ 473 (806)
.....+....+ +=|+|-.|+..-.+++..+..+. ..++.+..|..++. +.+. +...+...-...+-
T Consensus 136 ~FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPs----sEvf--------r~lP~r~eIl~gll 202 (486)
T COG0380 136 KFADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPS----SEVF--------RCLPWREEILEGLL 202 (486)
T ss_pred HHHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCC----HHHH--------hhCchHHHHHHHhh
Confidence 33444444322 34999999999888888777665 35677888876542 2221 11112222234678
Q ss_pred hCCEEEecCHHHHhhcccccccccccccccccccceee-ccCCCCCCcEEEecCCCCCCCCCCCchHH---HHHHhhhcc
Q 003636 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVV-HGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGS 549 (806)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~-~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~---~rl~~~~~~ 549 (806)
.||+|=+.|+..+..--+.+.+... ++ +...+. .|.+-..-++..+|=|||...|....... .+...
T Consensus 203 ~~dligFqt~~y~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~e---- 273 (486)
T COG0380 203 GADLIGFQTESYARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLE---- 273 (486)
T ss_pred cCCeeEecCHHHHHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHH----
Confidence 8999999988766533222222110 00 000000 11110123566789999987664321110 11111
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHH
Q 003636 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIA 625 (806)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~ 625 (806)
+. +.+ ..++.+|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++.... ..-.+...
T Consensus 274 l~----------~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~ 336 (486)
T COG0380 274 LK----------AEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQA 336 (486)
T ss_pred HH----------HHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHH
Confidence 11 111 2348899999999999999999999999987666 567777776544 11122223
Q ss_pred HHHHHHHHHHHcC-CCCc-----EEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHc----CCCEEEc
Q 003636 626 EIEKMHELMKTYK-LDGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC----GLPTFAT 695 (806)
Q Consensus 626 ~~~~l~~li~~~~-l~~~-----V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~----GlPVVAt 695 (806)
...++.+++.+.+ .-+. |.++- ..++..+++.++. .+|+++.+++-+|.-++..|+.+| +=|.|-|
T Consensus 337 ~~~~i~~~V~rIN~~fG~~~~~Pv~~l~---~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLS 412 (486)
T COG0380 337 LRLQIEELVGRINGEFGSLSWTPVHYLH---RDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILS 412 (486)
T ss_pred HHHHHHHHHHHHHhhcCCCCcceeEEEe---ccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEe
Confidence 4444455544331 1222 44443 3578899999999 599999999999999999999998 4588888
Q ss_pred CCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 696 ~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
...|.+..+.+ .++++|.|.+++|++|.+++. .+++.+++.-+.-++.+ .++|-...+..++.-
T Consensus 413 eFaGaa~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~ 476 (486)
T COG0380 413 EFAGAASELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDD 476 (486)
T ss_pred ccccchhhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 88888877744 689999999999999998774 46666666666666666 667888777776653
No 109
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.99 E-value=1.1e-07 Score=107.45 Aligned_cols=135 Identities=14% Similarity=0.065 Sum_probs=86.4
Q ss_pred CCCCEEEEEecCCc---CCCHHHHHHHHHHhhccCCCeEEEE-EeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003636 570 RSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (806)
Q Consensus 570 ~~k~iI~~vGRL~~---~Kgi~~Llea~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~f 645 (806)
.+++++++.|.... .+-...+++++... +.++++ +|.... . . ..++++|.+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~------------~-~-------~~~~~~v~~ 292 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL------------G-A-------EDLPDNVRV 292 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc------------c-c-------cCCCCceEE
Confidence 45677888998854 23444555666543 345444 444332 0 0 245678999
Q ss_pred cccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcC----cccccccCCcEEEECCC--CHH
Q 003636 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPD 719 (806)
Q Consensus 646 lG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG----~~EiI~dg~~G~li~p~--d~e 719 (806)
.+ .++..+++ . .+|++|.- +-..|+.||+++|+|+|....++ .++.++..+.|..+++. +.+
T Consensus 293 ~~----~~p~~~ll---~-~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWLL---P-RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHHh---h-hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 45555554 4 59999954 33479999999999999996554 35556666678877665 678
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003636 720 QAAELMADFFGKCKENPSHWKKISDGG 746 (806)
Q Consensus 720 ~la~aI~~~l~~l~~dp~~~~~ms~~a 746 (806)
++++++.+++ +++ .+++..+.+
T Consensus 361 ~l~~al~~~l----~~~-~~~~~~~~~ 382 (401)
T cd03784 361 RLAAALRRLL----DPP-SRRRAAALL 382 (401)
T ss_pred HHHHHHHHHh----CHH-HHHHHHHHH
Confidence 8888886654 543 444444433
No 110
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.92 E-value=2.7e-09 Score=113.11 Aligned_cols=182 Identities=15% Similarity=0.107 Sum_probs=100.8
Q ss_pred eEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcc-cccceeec-
Q 003636 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERVS- 357 (806)
Q Consensus 280 rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~-~~~~e~i~- 357 (806)
||++||....|- -.+||...++- .|+++|+++||+|. |+++.+........ ...+....
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999988642 47899999999 66677799999999 99888642211100 00000000
Q ss_pred -------------------CCCceEEEEecCCCcccccccccccCCchh-----h---HH---HHHHHHHHHHHHHcCCC
Q 003636 358 -------------------GTEHTHILRVPFRSEKGILRQWISRFDVWP-----Y---LE---TFTEDVGSEITAELQGF 407 (806)
Q Consensus 358 -------------------g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~-----y---l~---~f~~~~~~~i~~~~~~k 407 (806)
...++.++.+... .+.++..++. | .+ .|...+.. +...+..+
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~-------~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le-~~~~l~~~ 133 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNP-------EYFDRPGIYGDNGGDYPDNAERFAFFSRAALE-LLKKLGWK 133 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESH-------HHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHH-HHCTCT-S
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecCh-------hhccccceeccCCCcchhHHHHHHHHHHHHHH-HHHhhCCC
Confidence 0023343333221 1222333331 1 12 23333333 33334569
Q ss_pred ceEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCCcccCCC-C-----hhhHhh--hhhhhhchhhhhHHHHHh
Q 003636 408 PDFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPD-S-----DIYWKK--FDEKYHFSCQFTADLIAM 472 (806)
Q Consensus 408 PDlIh~h~~~~~lva~lla~~l-------gvp~v~t~H~l~~~k~~~-s-----~~~~~~--l~~~y~~~~~~~~e~~a~ 472 (806)
|||||+|.|.+++++.+++... ++|+|+|+|++....... . .+.+.. ....+.+...+...+..+
T Consensus 134 pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi 213 (245)
T PF08323_consen 134 PDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGI 213 (245)
T ss_dssp -SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHH
T ss_pred CCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHH
Confidence 9999999999999999888865 599999999975543211 1 111111 112223333445667889
Q ss_pred hhCCEEEecCHHHHhh
Q 003636 473 NNADFIITSTYQEIAG 488 (806)
Q Consensus 473 ~~AD~IIt~S~~~~~~ 488 (806)
..||.|+|+|+..++.
T Consensus 214 ~~AD~v~TVS~~Ya~E 229 (245)
T PF08323_consen 214 VYADKVTTVSPTYARE 229 (245)
T ss_dssp HHSSEEEESSHHHHHH
T ss_pred HhcCEeeeCCHHHHHH
Confidence 9999999999987663
No 111
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.91 E-value=1.9e-06 Score=97.28 Aligned_cols=111 Identities=17% Similarity=0.191 Sum_probs=73.9
Q ss_pred CCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcC----cccccccCCcEEEEC
Q 003636 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHID 714 (806)
Q Consensus 639 l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG----~~EiI~dg~~G~li~ 714 (806)
+.++|.+.+ .++..+ +++ .+|++|..+ | ..|+.||+++|+|+|+....+ ..+.+.+.+.|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457898888 445444 455 599999764 2 248999999999999974433 334455656788776
Q ss_pred CC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 715 PY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 715 p~--d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
.. ++++++++|.+++ +|+++++++.+-+ +.+...-.-+..++.+.++
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l~-~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKMR-AEIREAGGARRAADEIEGF 389 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHHH-HHHHHcCCHHHHHHHHHHh
Confidence 43 5788888886654 7888776664433 3344445666666666654
No 112
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.90 E-value=4.4e-08 Score=98.84 Aligned_cols=182 Identities=18% Similarity=0.150 Sum_probs=116.5
Q ss_pred cceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeec
Q 003636 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (806)
Q Consensus 278 ~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~ 357 (806)
|.||+||...|.|+. .||-|+++. +|+.+|+++|++|+ |.|+...... . ..
T Consensus 1 mkkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EF 51 (185)
T ss_pred CceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Cc
Confidence 368999999999754 599999999 88889999999999 9998632211 1 12
Q ss_pred CCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC-chHHHHHHHHH--cCCcEE
Q 003636 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYK--MGITQC 434 (806)
Q Consensus 358 g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~-~~lva~lla~~--lgvp~v 434 (806)
...+++++.+|.....+ .....|--.-...+...... -+.+.|+||.+... ++.+..++.+. .|.|++
T Consensus 52 ~y~gv~l~~i~~~~~g~--------~~si~yd~~sl~~al~~~~~-~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~ 122 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------AESIIYDFLSLLHALRFIKQ-DKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVV 122 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------hHHHHHHHHHHHHHHHHHhh-ccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEE
Confidence 33478999998754211 11111110011111111111 12357899987766 45555555443 477999
Q ss_pred EEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccC
Q 003636 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (806)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi 514 (806)
++.|+++.. +.+|..+..+|. ...|.++.+.||.+|+-|....+..++. |
T Consensus 123 vN~DGlEWk-----R~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~---y------------------ 172 (185)
T PF09314_consen 123 VNMDGLEWK-----RAKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER---Y------------------ 172 (185)
T ss_pred ECCCcchhh-----hhhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH---c------------------
Confidence 999998652 346665555443 2468889999999999998865532211 1
Q ss_pred CCCCCcEEEecCCCC
Q 003636 515 DVFDPKFNIVSPGAD 529 (806)
Q Consensus 515 ~v~~~k~~VIpnGVD 529 (806)
+ ..+..+||+|.|
T Consensus 173 ~--~~~s~~IaYGad 185 (185)
T PF09314_consen 173 G--RKKSTFIAYGAD 185 (185)
T ss_pred C--CCCcEEecCCCC
Confidence 1 378899999987
No 113
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.84 E-value=1.3e-06 Score=99.15 Aligned_cols=166 Identities=14% Similarity=0.213 Sum_probs=105.0
Q ss_pred CCCCEE-EEEecCC--cCCCHHHHHHHHHHhhccCCCeEEEEEe-CcCCCCCCcchHHHHHHHHHHHHHHHcCCC-----
Q 003636 570 RSKPIV-FSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKLD----- 640 (806)
Q Consensus 570 ~~k~iI-~~vGRL~--~~Kgi~~Llea~~~l~~~~~~v~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~~~~l~----- 640 (806)
+++++| +.-|.-. -.+++..+++++.++.+. +++.+++.- ++.+ .+.+.+..++.+..
T Consensus 203 ~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~ 269 (396)
T TIGR03492 203 TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSS 269 (396)
T ss_pred CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCc
Confidence 344444 4444332 256788999999999765 778887665 4443 34455555544442
Q ss_pred ---------CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCc---cccccc--
Q 003636 641 ---------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP---AEIIEH-- 706 (806)
Q Consensus 641 ---------~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~---~EiI~d-- 706 (806)
+++.+.. ...++..+++ +||++|..| |.+..|++++|+|+|.....+. ..+.+.
T Consensus 270 ~~~~~~~~~~~~~v~~------~~~~~~~~l~-~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~ 337 (396)
T TIGR03492 270 EDQTSLFQKGTLEVLL------GRGAFAEILH-WADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQS 337 (396)
T ss_pred cccchhhccCceEEEe------chHhHHHHHH-hCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhH
Confidence 1244443 2346788888 599999885 5666999999999999874443 222232
Q ss_pred ---CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003636 707 ---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMT 765 (806)
Q Consensus 707 ---g~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 765 (806)
| .+..+...+++.+++.+.++ ++|++.+++|.++++++..+...-+.+++.+.+
T Consensus 338 ~l~g-~~~~l~~~~~~~l~~~l~~l----l~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 338 RLLG-GSVFLASKNPEQAAQVVRQL----LADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred hhcC-CEEecCCCCHHHHHHHHHHH----HcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3 34455566788888888654 479999988886665554344445555554443
No 114
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.82 E-value=6.2e-07 Score=97.92 Aligned_cols=116 Identities=16% Similarity=0.213 Sum_probs=81.4
Q ss_pred CCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 003636 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (806)
Q Consensus 570 ~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~ 649 (806)
+.+.+++++|..+.. .++++++++ ++..++++|.... + ...++|++.++
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~--------------------~--~~~~ni~~~~~- 239 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA--------------------D--PRPGNIHVRPF- 239 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc--------------------c--ccCCCEEEeec-
Confidence 456689999988775 667777664 4788999976532 0 11578998863
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcH-HHHHHHHcCCCEEEcCCcCccc------ccccCCcEEEECCC--CHHH
Q 003636 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGL-TVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHIDPY--HPDQ 720 (806)
Q Consensus 650 ~~~~~~~el~~~la~aaDifV~PS~~E~fGl-tvlEAMa~GlPVVAt~~GG~~E------iI~dg~~G~li~p~--d~e~ 720 (806)
...++.++++. ||++|.-+ |. |+.||+++|+|++.-...+..| .+++-+.|..+++. +++.
T Consensus 240 ----~~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 240 ----STPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred ----ChHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 23578899994 99999763 44 4999999999999987655433 34455567776543 5677
Q ss_pred HHHHHH
Q 003636 721 AAELMA 726 (806)
Q Consensus 721 la~aI~ 726 (806)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 777764
No 115
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.81 E-value=7.2e-06 Score=91.22 Aligned_cols=276 Identities=14% Similarity=0.145 Sum_probs=171.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEE-ecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHH
Q 003636 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTI-AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (806)
Q Consensus 406 ~kPDlIh~h~~~~~lva~lla~~lgvp~v~t-~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 484 (806)
.+||+++.--+.-...-..-+++.|+|++.. +.=.++ |-..|+.+ .. .-+..+.+.|.|++.|+.
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~r-----S~~~y~k~-------~~--~~~~~~~~i~li~aQse~ 187 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARLSDR-----SFARYAKL-------KF--LARLLFKNIDLILAQSEE 187 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeechh-----hhHHHHHH-------HH--HHHHHHHhcceeeecCHH
Confidence 3899888666554333345567889997763 211111 11122221 11 234568899999999987
Q ss_pred HHhhcccccccccccccccccccceeeccCCCCCCcEEEecCC-CCCCCCCCCchHHHHHHhhhcchhhhccCccccccc
Q 003636 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (806)
Q Consensus 485 ~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnG-VD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 563 (806)
..+ +|.+ -|+ .++.+.-|= .|.+ |.+........ .+.+
T Consensus 188 D~~-------Rf~~-------------LGa----~~v~v~GNlKfd~~---~~~~~~~~~~~--------------~r~~ 226 (419)
T COG1519 188 DAQ-------RFRS-------------LGA----KPVVVTGNLKFDIE---PPPQLAAELAA--------------LRRQ 226 (419)
T ss_pred HHH-------HHHh-------------cCC----cceEEecceeecCC---CChhhHHHHHH--------------HHHh
Confidence 665 2322 122 223333331 1111 11111111111 1222
Q ss_pred cCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC---
Q 003636 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--- 640 (806)
Q Consensus 564 ~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~--- 640 (806)
++ ..+++++..+.- ..--+.+++++..+++.+|++.+++|=..|+ -.+.+.+++++.|+.
T Consensus 227 l~----~~r~v~iaaSTH--~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~ 289 (419)
T COG1519 227 LG----GHRPVWVAASTH--EGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTR 289 (419)
T ss_pred cC----CCCceEEEecCC--CchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEe
Confidence 33 237888888873 2334568899999999999999999988776 366788888888773
Q ss_pred ---------CcEEEcccccCcCChHHHHHHHHccCcE-EEECCCCCCCcHHHHHHHHcCCCEEEc----CCcCccccccc
Q 003636 641 ---------GQFRWIAAQTNRARNGELYRYIADTKGA-FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH 706 (806)
Q Consensus 641 ---------~~V~flG~~~~~~~~~el~~~la~aaDi-fV~PS~~E~fGltvlEAMa~GlPVVAt----~~GG~~EiI~d 706 (806)
+.=.++| ...+|+..+|. .+|+ ||--|+.+--|--.+|+.++|+|||.. +.....+-+..
T Consensus 290 rS~~~~~~~~tdV~l~-----DtmGEL~l~y~-~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~ 363 (419)
T COG1519 290 RSQGDPPFSDTDVLLG-----DTMGELGLLYG-IADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQ 363 (419)
T ss_pred ecCCCCCCCCCcEEEE-----ecHhHHHHHHh-hccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHh
Confidence 1112333 25789999999 4787 666677766688899999999999997 33344444455
Q ss_pred CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 707 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 707 g~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
.+.|+.++ |.+.++.++ +.+.+|++.+++++++|...+.++ ....+++++..+
T Consensus 364 ~ga~~~v~--~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~~---~gal~r~l~~l~ 416 (419)
T COG1519 364 AGAGLQVE--DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQN---RGALARTLEALK 416 (419)
T ss_pred cCCeEEEC--CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHHh---hHHHHHHHHHhh
Confidence 56788886 566666666 556688999999999999998654 335555555443
No 116
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.79 E-value=1e-06 Score=98.84 Aligned_cols=275 Identities=16% Similarity=0.159 Sum_probs=154.0
Q ss_pred HHHHHHHHHHcCCCceEEEEcC-CCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHh
Q 003636 394 EDVGSEITAELQGFPDFIIGNY-SDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (806)
Q Consensus 394 ~~~~~~i~~~~~~kPDlIh~h~-~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~ 472 (806)
..+.+.+.+ .+||+|.++. ....+.++++|..+++|++. +|+-..+. +. .+... -...-
T Consensus 83 ~~~~~~~~~---~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~----~~----~eE~~--------r~~i~ 142 (365)
T TIGR03568 83 IGFSDAFER---LKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTE----GA----IDESI--------RHAIT 142 (365)
T ss_pred HHHHHHHHH---hCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCC----CC----chHHH--------HHHHH
Confidence 344444444 4899999887 44578889999999999875 44432211 00 01100 11223
Q ss_pred hhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEec-CCCCCCCCCCCchHHHHHHhhhcchh
Q 003636 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS-PGADMDIYFPYSEKQKRLTALHGSIE 551 (806)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIp-nGVD~~~f~p~~~~~~rl~~~~~~i~ 551 (806)
+-||..+++|....+. ....|.+ +.++.++- +++|.-.+.......
T Consensus 143 ~la~l~f~~t~~~~~~--------------------L~~eg~~--~~~i~~tG~~~iD~l~~~~~~~~~----------- 189 (365)
T TIGR03568 143 KLSHLHFVATEEYRQR--------------------VIQMGED--PDRVFNVGSPGLDNILSLDLLSKE----------- 189 (365)
T ss_pred HHHhhccCCCHHHHHH--------------------HHHcCCC--CCcEEEECCcHHHHHHhhhccCHH-----------
Confidence 4567777788765541 0112443 55776664 466654322211111
Q ss_pred hhccCccccccccCCCCCCC-CCEEEEEecCC--cCCCHHHHHHHHHHhhccCCCeEEEEEe--CcCCCCCCcchHHHHH
Q 003636 552 QLLFDPEQNDEHVGTLSDRS-KPIVFSMARLD--HVKNMTGLVECYGKNSQLRELVNLVVVA--GYIDVNKSKDREEIAE 626 (806)
Q Consensus 552 ~~l~~~~~~~~~~g~l~~~~-k~iI~~vGRL~--~~Kgi~~Llea~~~l~~~~~~v~LvIVG--~g~~~~~~~d~ee~~~ 626 (806)
+..+.+|+ +.+ +.+++.+-+-. +....+.+.+.+..+.+...++ +++. .++. +...
T Consensus 190 -------~~~~~lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~--------~~~i 250 (365)
T TIGR03568 190 -------ELEEKLGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAG--------SRII 250 (365)
T ss_pred -------HHHHHhCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCC--------chHH
Confidence 11234565 333 44445555433 3333344444444444332234 3343 2222 1111
Q ss_pred HHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccccccc
Q 003636 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (806)
Q Consensus 627 ~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d 706 (806)
.+.+.++.. + .++|++++ +++..++..+++. |+++|--|- | .+.||.++|+|||+ .|.-.|.++.
T Consensus 251 ~~~i~~~~~--~-~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~~ 315 (365)
T TIGR03568 251 NEAIEEYVN--E-HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRLR 315 (365)
T ss_pred HHHHHHHhc--C-CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhhh
Confidence 223333321 1 36799998 7889999999995 999985531 2 34899999999995 4678888888
Q ss_pred CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 707 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 707 g~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
|.+++++ +.|++++.+++.++ .+++.++.+ ......|.....++++.++
T Consensus 316 g~nvl~v-g~~~~~I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 316 ADSVIDV-DPDKEEIVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred cCeEEEe-CCCHHHHHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 8888888 56899999988653 244433332 1122346666666666553
No 117
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.54 E-value=1.7e-06 Score=82.56 Aligned_cols=123 Identities=20% Similarity=0.219 Sum_probs=78.6
Q ss_pred HHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHHH
Q 003636 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 397 (806)
Q Consensus 318 eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~ 397 (806)
.+++.|+++|++|+ ++|..... +......++.+++++.... ...+++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 66777899999999 88874211 1111123578888764321 1444543 22 455
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcC-CcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhC
Q 003636 398 SEITAELQGFPDFIIGNYSDG-NLVASLLAYKMG-ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (806)
Q Consensus 398 ~~i~~~~~~kPDlIh~h~~~~-~lva~lla~~lg-vp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~A 475 (806)
+.+. ..+||+||+|...+ ++++.++++..+ +|++++.|+..... .+. ..+ + +. ...+.+++.|
T Consensus 68 k~ik---~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~~-~~~-~---~~-----~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIK---KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SSK-KKK-L---KK-----FIIKFAFKRA 132 (139)
T ss_pred HHhc---cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CCc-hHH-H---HH-----HHHHHHHHhC
Confidence 5454 34899999999886 788888889998 99999999864311 111 110 0 11 1345689999
Q ss_pred CEEEecC
Q 003636 476 DFIITST 482 (806)
Q Consensus 476 D~IIt~S 482 (806)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
No 118
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.39 E-value=3.8e-05 Score=84.56 Aligned_cols=69 Identities=13% Similarity=0.095 Sum_probs=51.3
Q ss_pred CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccc------ccccCCcEEEE
Q 003636 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHI 713 (806)
Q Consensus 640 ~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~E------iI~dg~~G~li 713 (806)
.+++.+.++. + +++..+++. +|++|.-+- ..++.||+++|+|++.....+..| .+++.+.|..+
T Consensus 228 ~~~v~~~~~~----~-~~~~~~l~~-ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRIT----T-DNFKELIKN-AELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEECC----h-HHHHHHHHh-CCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 4678888732 2 578888884 999998752 247999999999999987655333 45666688888
Q ss_pred CCCCH
Q 003636 714 DPYHP 718 (806)
Q Consensus 714 ~p~d~ 718 (806)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 76666
No 119
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.37 E-value=9.6e-06 Score=92.66 Aligned_cols=185 Identities=12% Similarity=0.086 Sum_probs=120.3
Q ss_pred cccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003636 558 EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (806)
Q Consensus 558 ~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 637 (806)
...|+.+|+ +++..++++..++. |=-...++++.++.+.-|+.+|++...... ..+.+.+.+.+.
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~~--KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNLF--KISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAH 337 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-GG--G--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHT
T ss_pred ccCHHHcCC--CCCceEEEecCccc--cCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHc
Confidence 456788999 66777777777665 445788888888888889999999875433 135688888899
Q ss_pred CCC-CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccccc------ccCCcE
Q 003636 638 KLD-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII------EHGASG 710 (806)
Q Consensus 638 ~l~-~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI------~dg~~G 710 (806)
|+. +++.|.+ ..+.++..+.+.. +|+++=|-.+-| |.|.+||+.+|+|||+-.....+.-+ .-|-.-
T Consensus 338 Gv~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~E 411 (468)
T PF13844_consen 338 GVDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPE 411 (468)
T ss_dssp TS-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GG
T ss_pred CCChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCch
Confidence 986 7899988 5567777777774 999998854444 78999999999999987533333222 112233
Q ss_pred EEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 003636 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER--YTWKIYSERLMTLAGV 769 (806)
Q Consensus 711 ~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~--ysw~~~a~~ll~ly~~ 769 (806)
++. .|.++..+.-.+ |..|++.++++.++-++...+. |+-+.+++.+++.|+.
T Consensus 412 lIA--~s~~eYv~~Av~----La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 412 LIA--DSEEEYVEIAVR----LATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp GB---SSHHHHHHHHHH----HHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred hcC--CCHHHHHHHHHH----HhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 333 377887776644 4479999999999988776544 8899999999998864
No 120
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.32 E-value=6.8e-05 Score=81.15 Aligned_cols=97 Identities=14% Similarity=0.254 Sum_probs=70.2
Q ss_pred CCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEE-EEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003636 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNL-VVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (806)
Q Consensus 572 k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~L-vIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~ 650 (806)
+.+++++|..+..+....+++++.++. +++++ +|+|.+.. ..+++++.++.. +++++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 468999999998776667788887653 34443 35565533 134566666543 47888873
Q ss_pred CcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCC
Q 003636 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH 697 (806)
Q Consensus 651 ~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~ 697 (806)
..++.++++. +|++|.+ .|.|+.|++++|+|+|+...
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 4578899995 9999985 57999999999999998754
No 121
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.27 E-value=0.00091 Score=78.44 Aligned_cols=138 Identities=14% Similarity=0.007 Sum_probs=90.0
Q ss_pred CCEEEEEecCCcC-----CCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003636 572 KPIVFSMARLDHV-----KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (806)
Q Consensus 572 k~iI~~vGRL~~~-----Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~fl 646 (806)
.+++++.|..... +-+..++++++++. .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 5788999987532 23456666766553 46666655433 00 2457889988
Q ss_pred ccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCC----cCcccccccCCcEEEECCC--CHHH
Q 003636 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEHGASGFHIDPY--HPDQ 720 (806)
Q Consensus 647 G~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~----GG~~EiI~dg~~G~li~p~--d~e~ 720 (806)
+ .++..++... . .+++||.= |-..++.||+.+|+|+|+-.. ...+..++.-+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 8 5566665521 1 37888863 334589999999999999743 3355556666688888764 4577
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 003636 721 AAELMADFFGKCKENPSHWKKISDGGLK 748 (806)
Q Consensus 721 la~aI~~~l~~l~~dp~~~~~ms~~ar~ 748 (806)
+.++|.+++ +||++++...+-+..
T Consensus 422 l~~ai~~vl----~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 422 LVLAIVDVI----ENPKYRKNLKELRHL 445 (507)
T ss_pred HHHHHHHHh----CCHHHHHHHHHHHHH
Confidence 777776554 788887766555444
No 122
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.18 E-value=8.1e-05 Score=83.05 Aligned_cols=279 Identities=16% Similarity=0.178 Sum_probs=145.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhh
Q 003636 395 DVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~ 473 (806)
.+...+.+. +||+|..+.-. ..+.++++|..+++|++. +|+--.+. +..-...+...+ ...-+
T Consensus 58 ~~~~~~~~~---~Pd~Vlv~GD~~~~la~alaA~~~~ipv~H-ieaGlRs~----d~~~g~~de~~R--------~~i~~ 121 (346)
T PF02350_consen 58 ELADVLERE---KPDAVLVLGDRNEALAAALAAFYLNIPVAH-IEAGLRSG----DRTEGMPDEINR--------HAIDK 121 (346)
T ss_dssp HHHHHHHHH---T-SEEEEETTSHHHHHHHHHHHHTT-EEEE-ES-----S-----TTSSTTHHHHH--------HHHHH
T ss_pred HHHHHHHhc---CCCEEEEEcCCchHHHHHHHHHHhCCCEEE-ecCCCCcc----ccCCCCchhhhh--------hhhhh
Confidence 444444544 99999987654 367889999999999655 44420000 000001111111 12345
Q ss_pred hCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecC-CCCCCCCCCCchHHHHHHhhhcchhh
Q 003636 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQ 552 (806)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpn-GVD~~~f~p~~~~~~rl~~~~~~i~~ 552 (806)
-||.-+++|...++. | ...|++ +.++.++-| ++|.-... .....+.+.
T Consensus 122 la~lhf~~t~~~~~~------------------L--~~~G~~--~~rI~~vG~~~~D~l~~~--------~~~~~~~~~- 170 (346)
T PF02350_consen 122 LAHLHFAPTEEARER------------------L--LQEGEP--PERIFVVGNPGIDALLQN--------KEEIEEKYK- 170 (346)
T ss_dssp H-SEEEESSHHHHHH------------------H--HHTT----GGGEEE---HHHHHHHHH--------HHTTCC-HH-
T ss_pred hhhhhccCCHHHHHH------------------H--HhcCCC--CCeEEEEChHHHHHHHHh--------HHHHhhhhh-
Confidence 689999999876551 1 113454 778888754 33321000 000000000
Q ss_pred hccCccccccccCCCC-CCCCCEEEEEecCCc---CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHH
Q 003636 553 LLFDPEQNDEHVGTLS-DRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628 (806)
Q Consensus 553 ~l~~~~~~~~~~g~l~-~~~k~iI~~vGRL~~---~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~ 628 (806)
..++.. .+++.++++.=|... ......+.+++..+.+. +++.+++.....+ ....
T Consensus 171 ----------~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~ 229 (346)
T PF02350_consen 171 ----------NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSD 229 (346)
T ss_dssp ----------HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHH
T ss_pred ----------hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHH
Confidence 001111 244455566544443 24467788888888776 7888888887443 1234
Q ss_pred HHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHH-HHHHcCCCEEEc-CCcCccccccc
Q 003636 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV-EAMTCGLPTFAT-CHGGPAEIIEH 706 (806)
Q Consensus 629 ~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvl-EAMa~GlPVVAt-~~GG~~EiI~d 706 (806)
.+.+..+++ ++++++. .++..++..+++. |+++|--| | .+. ||.++|+|||.- +.|.-.+.+..
T Consensus 230 ~i~~~l~~~---~~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~ 295 (346)
T PF02350_consen 230 IIIEKLKKY---DNVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRER 295 (346)
T ss_dssp HHHHHHTT----TTEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHT
T ss_pred HHHHHhccc---CCEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhh
Confidence 455555544 3899997 7788999999995 88888654 5 677 999999999998 55666777777
Q ss_pred CCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003636 707 GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTL 766 (806)
Q Consensus 707 g~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~l 766 (806)
+.+-+ +. .|.+++.++|.+++ .+++.+.++.. ...-|.-...++++.++
T Consensus 296 ~~nvl-v~-~~~~~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~ 344 (346)
T PF02350_consen 296 GSNVL-VG-TDPEAIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEI 344 (346)
T ss_dssp TSEEE-ET-SSHHHHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHH
T ss_pred cceEE-eC-CCHHHHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHh
Confidence 76555 75 78999999997665 45444444322 12345445555555554
No 123
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.14 E-value=1.2e-05 Score=88.44 Aligned_cols=99 Identities=25% Similarity=0.384 Sum_probs=64.2
Q ss_pred cCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccccc----cc-CCcEEEE-C--CCCHHHHHHHHHHHHHhhcCCH
Q 003636 665 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII----EH-GASGFHI-D--PYHPDQAAELMADFFGKCKENP 736 (806)
Q Consensus 665 aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI----~d-g~~G~li-~--p~d~e~la~aI~~~l~~l~~dp 736 (806)
.|.+.|+||.||++|.|..|.--+|+|-|.|+..|..-.+ ++ ..-|+.+ + -..+++-.+.+.+++.... ..
T Consensus 500 GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F~-~q 578 (692)
T KOG3742|consen 500 GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEFC-KQ 578 (692)
T ss_pred cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHHH-HH
Confidence 6999999999999999999999999999999988865444 33 2356654 2 1245555555555543322 33
Q ss_pred HHHHHHHHHH-HHHHHHhCCHHHHHHHHH
Q 003636 737 SHWKKISDGG-LKRIYERYTWKIYSERLM 764 (806)
Q Consensus 737 ~~~~~ms~~a-r~~v~~~ysw~~~a~~ll 764 (806)
..|+++-++. -++...-.+|+.+..-|.
T Consensus 579 sRRQRIiqRNrtErLSdLLDWk~lG~~Y~ 607 (692)
T KOG3742|consen 579 SRRQRIIQRNRTERLSDLLDWKYLGRYYR 607 (692)
T ss_pred HHHHHHHHhcchhhHHHHHhHHHHhHHHH
Confidence 4455544433 344445566766554443
No 124
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=98.05 E-value=0.00032 Score=79.98 Aligned_cols=159 Identities=14% Similarity=0.087 Sum_probs=105.3
Q ss_pred CCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 003636 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (806)
Q Consensus 570 ~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~ 649 (806)
+.+++.++.|..... .+.+-.++..+.+. ++++++..++.+ ...-++++++...+
T Consensus 236 d~~~vyvslGt~~~~--~~l~~~~~~a~~~l--~~~vi~~~~~~~-------------------~~~~~~p~n~~v~~-- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA--VELLAIVLEALADL--DVRVIVSLGGAR-------------------DTLVNVPDNVIVAD-- 290 (406)
T ss_pred CCCeEEEEcCCcccH--HHHHHHHHHHHhcC--CcEEEEeccccc-------------------cccccCCCceEEec--
Confidence 455667888877755 33333344444443 577777776622 01226778898887
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCc----CcccccccCCcEEEEC--CCCHHHHHH
Q 003636 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHID--PYHPDQAAE 723 (806)
Q Consensus 650 ~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~G----G~~EiI~dg~~G~li~--p~d~e~la~ 723 (806)
.++..++.. .+|++|+. .|. .++.||+..|+|+|+--.+ ..++-+++-+.|..+. .-+.+.+++
T Consensus 291 --~~p~~~~l~----~ad~vI~h---GG~-gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~ 360 (406)
T COG1819 291 --YVPQLELLP----RADAVIHH---GGA-GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRA 360 (406)
T ss_pred --CCCHHHHhh----hcCEEEec---CCc-chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHH
Confidence 566666555 69999987 343 4789999999999997433 3566777888898887 578999999
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003636 724 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 724 aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
+|.+++ +|+.+++...+... -..+.-.-+..++.+.+..+
T Consensus 361 av~~vL----~~~~~~~~~~~~~~-~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 361 AVNEVL----ADDSYRRAAERLAE-EFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHHHHh----cCHHHHHHHHHHHH-HhhhcccHHHHHHHHHHHHh
Confidence 997665 78877666544433 34455555556666666443
No 125
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.98 E-value=0.0012 Score=73.17 Aligned_cols=276 Identities=17% Similarity=0.188 Sum_probs=143.4
Q ss_pred HHHHHHHHHCCCceeeceeEEeccCCCCCCCcccccceeecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHHH
Q 003636 317 NEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDV 396 (806)
Q Consensus 317 ~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~~~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~ 396 (806)
+.+.++|.++||+|. |.||...... .+-...+ .....+--.. ......+.....+.
T Consensus 17 k~~I~eL~~~GheV~----it~R~~~~~~------~LL~~yg---~~y~~iG~~g-----------~~~~~Kl~~~~~R~ 72 (335)
T PF04007_consen 17 KNIIRELEKRGHEVL----ITARDKDETE------ELLDLYG---IDYIVIGKHG-----------DSLYGKLLESIERQ 72 (335)
T ss_pred HHHHHHHHhCCCEEE----EEEeccchHH------HHHHHcC---CCeEEEcCCC-----------CCHHHHHHHHHHHH
Confidence 478888999999998 8888743211 1111122 2222221111 11222222333333
Q ss_pred HHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCC
Q 003636 397 GSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNAD 476 (806)
Q Consensus 397 ~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD 476 (806)
.+......+.+||++++..+. .+..+|..+|+|.|....+-.. .. ..+..+--||
T Consensus 73 ~~l~~~~~~~~pDv~is~~s~---~a~~va~~lgiP~I~f~D~e~a-~~---------------------~~~Lt~Pla~ 127 (335)
T PF04007_consen 73 YKLLKLIKKFKPDVAISFGSP---EAARVAFGLGIPSIVFNDTEHA-IA---------------------QNRLTLPLAD 127 (335)
T ss_pred HHHHHHHHhhCCCEEEecCcH---HHHHHHHHhCCCeEEEecCchh-hc---------------------cceeehhcCC
Confidence 333333335699999976553 4566778899998887664111 00 0123455789
Q ss_pred EEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEe-cCCCCCCC----CCCCchHHHHHHhhhcchh
Q 003636 477 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMDI----YFPYSEKQKRLTALHGSIE 551 (806)
Q Consensus 477 ~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VI-pnGVD~~~----f~p~~~~~~rl~~~~~~i~ 551 (806)
.|+++.---... ...| ..+-.+. .||++... |.|..+..
T Consensus 128 ~i~~P~~~~~~~----~~~~---------------------G~~~~i~~y~G~~E~ayl~~F~Pd~~vl----------- 171 (335)
T PF04007_consen 128 VIITPEAIPKEF----LKRF---------------------GAKNQIRTYNGYKELAYLHPFKPDPEVL----------- 171 (335)
T ss_pred eeECCcccCHHH----HHhc---------------------CCcCCEEEECCeeeEEeecCCCCChhHH-----------
Confidence 998876321100 0000 1111233 56665533 44443322
Q ss_pred hhccCccccccccCCCCCCCCCEEEEEecCCcCCC------HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHH
Q 003636 552 QLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKN------MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIA 625 (806)
Q Consensus 552 ~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kg------i~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~ 625 (806)
+.+|+ + +.++|+. |..+.|- -..+-+.+..+.+. ... +|++....+
T Consensus 172 ----------~~lg~--~-~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~-~~~-vV~ipr~~~----------- 223 (335)
T PF04007_consen 172 ----------KELGL--D-DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKY-GRN-VVIIPRYED----------- 223 (335)
T ss_pred ----------HHcCC--C-CCCEEEE--EeccccCeeecCccchHHHHHHHHHhh-Cce-EEEecCCcc-----------
Confidence 34674 4 3455542 5544322 12344555666554 233 555654433
Q ss_pred HHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcC---ccc
Q 003636 626 EIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG---PAE 702 (806)
Q Consensus 626 ~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG---~~E 702 (806)
..++.++++ +.... .++ +...+++ -||++|-- -|....||...|+|+|.+-.|- .-+
T Consensus 224 ----~~~~~~~~~----~~i~~---~~v---d~~~Ll~-~a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~ 283 (335)
T PF04007_consen 224 ----QRELFEKYG----VIIPP---EPV---DGLDLLY-YADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDK 283 (335)
T ss_pred ----hhhHHhccC----ccccC---CCC---CHHHHHH-hcCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHH
Confidence 122334332 33332 122 2335666 38899953 3677799999999999875443 223
Q ss_pred ccccCCcEEEECCCCHHHHHHHHHH
Q 003636 703 IIEHGASGFHIDPYHPDQAAELMAD 727 (806)
Q Consensus 703 iI~dg~~G~li~p~d~e~la~aI~~ 727 (806)
.+.+ .|+++.-.|++++.+.+..
T Consensus 284 ~L~~--~Gll~~~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 284 YLIE--KGLLYHSTDPDEIVEYVRK 306 (335)
T ss_pred HHHH--CCCeEecCCHHHHHHHHHH
Confidence 3333 4778888899998886644
No 126
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.84 E-value=0.0027 Score=71.41 Aligned_cols=103 Identities=22% Similarity=0.257 Sum_probs=70.5
Q ss_pred CCCCCEEE-EEec-CCc-CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003636 569 DRSKPIVF-SMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (806)
Q Consensus 569 ~~~k~iI~-~vGR-L~~-~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~f 645 (806)
++++++|. ..|. -.+ .+.+..+++++.++.+.+|++++++...... ..+.+.+.....+..-.+..
T Consensus 181 ~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~~~~~~~~~ 249 (373)
T PF02684_consen 181 DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEYPPDVSIVI 249 (373)
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhhCCCCeEEE
Confidence 45666554 4443 333 3566888999999999999999998875433 12234455555554433443
Q ss_pred cccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC
Q 003636 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (806)
Q Consensus 646 lG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~ 696 (806)
. .++-+..++ +||+.+..| |.+.+|++.+|+|.|+.-
T Consensus 250 ~--------~~~~~~~m~-~ad~al~~S-----GTaTLE~Al~g~P~Vv~Y 286 (373)
T PF02684_consen 250 I--------EGESYDAMA-AADAALAAS-----GTATLEAALLGVPMVVAY 286 (373)
T ss_pred c--------CCchHHHHH-hCcchhhcC-----CHHHHHHHHhCCCEEEEE
Confidence 3 235677787 499888766 999999999999999873
No 127
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.77 E-value=0.029 Score=65.14 Aligned_cols=141 Identities=13% Similarity=0.140 Sum_probs=78.6
Q ss_pred CCCCEEEEEecCCc--CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003636 570 RSKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (806)
Q Consensus 570 ~~k~iI~~vGRL~~--~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG 647 (806)
+++.+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 273 ~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~ 329 (459)
T PLN02448 273 EGSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP 329 (459)
T ss_pred CCceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec
Confidence 34567888888743 22244445555443 467777665321 0121111 24566666
Q ss_pred cccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC----CcCcccccccC-CcEEEECC-------
Q 003636 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-ASGFHIDP------- 715 (806)
Q Consensus 648 ~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~----~GG~~EiI~dg-~~G~li~p------- 715 (806)
.++..++... . +.++||.- +--++++||+++|+|+|+-. ....+..+.+. +.|+-+..
T Consensus 330 ----w~pQ~~iL~h-~-~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 399 (459)
T PLN02448 330 ----WCDQLKVLCH-S-SVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETL 399 (459)
T ss_pred ----cCCHHHHhcc-C-ccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCc
Confidence 5566666652 1 12336642 22458999999999999974 33445555552 45666631
Q ss_pred CCHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHH
Q 003636 716 YHPDQAAELMADFFGKCKENP-SHWKKISDGGL 747 (806)
Q Consensus 716 ~d~e~la~aI~~~l~~l~~dp-~~~~~ms~~ar 747 (806)
-+.+++++++.+++ .++ +..++|.+++.
T Consensus 400 ~~~~~l~~av~~vl----~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 400 VGREEIAELVKRFM----DLESEEGKEMRRRAK 428 (459)
T ss_pred CcHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 25678888887665 553 33444544444
No 128
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.74 E-value=0.00081 Score=77.20 Aligned_cols=180 Identities=14% Similarity=0.148 Sum_probs=124.7
Q ss_pred cccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003636 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (806)
Q Consensus 562 ~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~- 640 (806)
...|+ +++..++++.++. .|-...++..+.++.+.-|+..|++-|+|++ .+....+++++++.|+.
T Consensus 422 ~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCCh
Confidence 45788 5666666666544 4544556665556666679999999999866 24567899999999984
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc-------CCcCccccc-ccCCcEEE
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEII-EHGASGFH 712 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt-------~~GG~~EiI-~dg~~G~l 712 (806)
.+++|.+ +.++++....|. -+|+|+-+-.|-+ +.|.+||+.+|+||++- +.|+ .++ .-|..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhh
Confidence 7999998 677777777777 4999997765555 67899999999999874 2222 122 12333333
Q ss_pred ECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHH
Q 003636 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE--RYTWKIYSERLMTLAG 768 (806)
Q Consensus 713 i~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~--~ysw~~~a~~ll~ly~ 768 (806)
.+ +.++..++=.. +-+|...+++.+..-.+...+ -|+.+.+++++.++|.
T Consensus 561 A~--s~~dYV~~av~----~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 561 AD--SRADYVEKAVA----FGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred cC--CHHHHHHHHHH----hcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 33 45555544433 347888888877766555444 4889999999999975
No 129
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.61 E-value=0.00074 Score=81.51 Aligned_cols=151 Identities=13% Similarity=0.115 Sum_probs=111.7
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHH-HH---HHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LV---ECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~-Ll---ea~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (806)
..|+..+++...++++-|+...|...+ ++ +-+.++++.. ....+++.|.... .|...+..++.+.+++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 447777899999999999999999888 54 4455555431 1355666555433 3566677777787777
Q ss_pred H----HcCCCC--cEEEcccccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCCEEEcCCcCccccccc
Q 003636 635 K----TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (806)
Q Consensus 635 ~----~~~l~~--~V~flG~~~~~~~~~el~~~la~aaDifV~PS~--~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d 706 (806)
+ +-.+.+ +|.|+- .... .+.+.+-.++|+-.+.|. .|+.|.+=+=||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 7 333455 788886 3333 455555557999998876 89999999999999999999999999999976
Q ss_pred --CCcEEEECCCCHHHHHH
Q 003636 707 --GASGFHIDPYHPDQAAE 723 (806)
Q Consensus 707 --g~~G~li~p~d~e~la~ 723 (806)
+.|||.|-. +.++..+
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999954 5555544
No 130
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.60 E-value=0.0043 Score=68.83 Aligned_cols=201 Identities=20% Similarity=0.167 Sum_probs=114.9
Q ss_pred cCCCceEEEEcCC-CchHHHHHHHHHcC--CcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEe
Q 003636 404 LQGFPDFIIGNYS-DGNLVASLLAYKMG--ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (806)
Q Consensus 404 ~~~kPDlIh~h~~-~~~lva~lla~~lg--vp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt 480 (806)
...+||++++-++ +.|+-....-|+.| +|+|+.+- + +-+-|+.-. -....+..|.+.+
T Consensus 82 ~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---P-----sVWAWr~~R-----------a~~i~~~~D~lLa 142 (381)
T COG0763 82 LANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---P-----SVWAWRPKR-----------AVKIAKYVDHLLA 142 (381)
T ss_pred HhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---c-----ceeeechhh-----------HHHHHHHhhHeee
Confidence 3569999987665 44654444445555 77665432 1 222333211 1124667899988
Q ss_pred cCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCC-CCCCCCCCCchHHHHHHhhhcchhhhccCccc
Q 003636 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (806)
Q Consensus 481 ~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnG-VD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 559 (806)
.=+-|.+ +|.. .|+ ..+.|-+. +|.-.+.+....
T Consensus 143 ilPFE~~-------------------~y~k-~g~-----~~~yVGHpl~d~i~~~~~r~~-------------------- 177 (381)
T COG0763 143 ILPFEPA-------------------FYDK-FGL-----PCTYVGHPLADEIPLLPDREA-------------------- 177 (381)
T ss_pred ecCCCHH-------------------HHHh-cCC-----CeEEeCChhhhhccccccHHH--------------------
Confidence 7776654 1211 122 24445443 333323333222
Q ss_pred cccccCCCCCCCCCE-EEEEec-CCc-CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH-H
Q 003636 560 NDEHVGTLSDRSKPI-VFSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM-K 635 (806)
Q Consensus 560 ~~~~~g~l~~~~k~i-I~~vGR-L~~-~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li-~ 635 (806)
.++.+|+ +.++++ .+..|. -.+ .+....+++++.++++++|+.++++--.... .+.+.... +
T Consensus 178 ar~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~ 243 (381)
T COG0763 178 AREKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALK 243 (381)
T ss_pred HHHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhh
Confidence 2245777 455444 455553 233 4567788899999999999999998776543 12222222 2
Q ss_pred HcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC
Q 003636 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (806)
Q Consensus 636 ~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~ 696 (806)
.....-.+... .++-+..++ +||+.+..| |.+.+|+|.+|+|.|++.
T Consensus 244 ~~~~~~~~~~~--------~~~~~~a~~-~aD~al~aS-----GT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 244 WEVAGLSLILI--------DGEKRKAFA-AADAALAAS-----GTATLEAALAGTPMVVAY 290 (381)
T ss_pred ccccCceEEec--------CchHHHHHH-HhhHHHHhc-----cHHHHHHHHhCCCEEEEE
Confidence 22211223332 346677777 489877655 999999999999999983
No 131
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.60 E-value=0.0014 Score=79.22 Aligned_cols=151 Identities=14% Similarity=0.087 Sum_probs=109.2
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHH----HHHHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTG----LVECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~----Llea~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (806)
..|+..+++...++++-|+...|...+ .++.+.++++.. ....+++.|. ..| .|...+..++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGK-AaP---~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGK-AAP---GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEecc-CCC---CcHHHHHHHHHHHHHH
Confidence 556666899999999999999999888 445566665431 1245555554 332 3455566677777777
Q ss_pred HH----cCCCC--cEEEcccccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCCEEEcCCcCccccccc
Q 003636 635 KT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (806)
Q Consensus 635 ~~----~~l~~--~V~flG~~~~~~~~~el~~~la~aaDifV~PS~--~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d 706 (806)
+. -.+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 63 23445 788886 3333 455555557999998876 89999999999999999999999999999987
Q ss_pred --CCcEEEECCCCHHHHHH
Q 003636 707 --GASGFHIDPYHPDQAAE 723 (806)
Q Consensus 707 --g~~G~li~p~d~e~la~ 723 (806)
++|+|+|-. +.++..+
T Consensus 672 vG~eN~fiFG~-~~~ev~~ 689 (797)
T cd04300 672 VGEENIFIFGL-TAEEVEA 689 (797)
T ss_pred hCcCcEEEeCC-CHHHHHH
Confidence 889999954 4555443
No 132
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.42 E-value=0.01 Score=65.56 Aligned_cols=194 Identities=11% Similarity=0.076 Sum_probs=123.6
Q ss_pred CCcEEEecCCCCCCCCCCCchHHHHHHhhhcchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHh
Q 003636 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (806)
Q Consensus 518 ~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l 597 (806)
..++..++.++|.+.|.|.+.... -.--+.++|.-.+. .++.+-+.+-.-
T Consensus 160 ~~~~~~~~~a~d~~~~~~i~~da~-----------------------------~~~dL~~ign~~pD-r~e~~ke~~~~p 209 (373)
T COG4641 160 ARNCYYLPWAVDDSLFHPIPPDAS-----------------------------YDVDLNLIGNPYPD-RVEEIKEFFVEP 209 (373)
T ss_pred ccceeccCccCCchhcccCCcccc-----------------------------ceeeeEEecCCCcc-HHHHHHHHhhcc
Confidence 346778899999999999764321 11136677765553 222222222211
Q ss_pred h-ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC--
Q 003636 598 S-QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-- 674 (806)
Q Consensus 598 ~-~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~-- 674 (806)
. ++..+-++.+.|..-. .. +....-.+++..+|... +...+..++. ..++++.-++
T Consensus 210 s~kl~v~rr~~~~g~~y~----------------~~-~~~~~~~~~~~yIg~~~---~~~~v~~~~~-~~~~~~n~~r~~ 268 (373)
T COG4641 210 SFKLMVDRRFYVLGPRYP----------------DD-IWGRTWEPNVQYIGYYN---PKDGVPNAFK-RDDVTLNINRAS 268 (373)
T ss_pred chhhhccceeeecCCccc----------------hh-hhcccccchhhhhhccC---ccchhhhccc-ccceeeeecHHH
Confidence 1 1111245666665521 00 11111134566666322 2256666666 3667664332
Q ss_pred -CCC---CcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003636 675 -YEA---FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (806)
Q Consensus 675 -~E~---fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v 750 (806)
-++ +.+-+.|+|+||.|-+++...+..-...+|+.-.+.. |..++++++.. +...++.++++++.|.++|
T Consensus 269 ~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~--d~kdl~~~~~y----ll~h~~erkeiae~~ye~V 342 (373)
T COG4641 269 IANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ--DSKDLKEKLKY----LLNHPDERKEIAECAYERV 342 (373)
T ss_pred HHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec--CHHHHHHHHHH----HhcCcchHHHHHHhhHHHH
Confidence 122 3778999999999999998888888898887766654 89999999955 5589999999999999999
Q ss_pred HHhCCHHHHHHHHHHHHH
Q 003636 751 YERYTWKIYSERLMTLAG 768 (806)
Q Consensus 751 ~~~ysw~~~a~~ll~ly~ 768 (806)
...||.+.-+..+++...
T Consensus 343 ~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 343 LARHTYEERIFKLLNEIA 360 (373)
T ss_pred HHhccHHHHHHHHHHHHH
Confidence 999998887766666543
No 133
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.0035 Score=75.03 Aligned_cols=144 Identities=16% Similarity=0.132 Sum_probs=111.7
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHHHH----HHHHHhh-ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNS-QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~Ll----ea~~~l~-~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~ 637 (806)
+.|+..+++...++++-|+...|..+..+ ..+..++ +..|.+.+++.|.... .|...+..++.+...++..
T Consensus 478 ~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~i 553 (750)
T COG0058 478 RTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVI 553 (750)
T ss_pred hcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhh
Confidence 34565678999999999999999887765 3444455 3445566566565433 4567777888888888887
Q ss_pred CCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCCEEEcCCcCcccccc--cCCcEEEE
Q 003636 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHI 713 (806)
Q Consensus 638 ~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~--~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~--dg~~G~li 713 (806)
+...+|.|+. ..+. .+.+.+-.++||-.+.|. .|+.|.+=+-||.-|.++|+|-.|...|+.+ ++.|||.|
T Consensus 554 n~~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~f 628 (750)
T COG0058 554 NNKLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIF 628 (750)
T ss_pred cccceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEe
Confidence 7777899986 3333 455555557999988775 8999999999999999999999999999997 89999999
Q ss_pred CC
Q 003636 714 DP 715 (806)
Q Consensus 714 ~p 715 (806)
-.
T Consensus 629 G~ 630 (750)
T COG0058 629 GE 630 (750)
T ss_pred CC
Confidence 54
No 134
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=97.25 E-value=0.0023 Score=77.25 Aligned_cols=151 Identities=15% Similarity=0.096 Sum_probs=107.8
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHH-HH---HHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LV---ECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~-Ll---ea~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (806)
+.|+..+++...++++-|+...|...+ ++ +.+.++++.. ....+++.|.. .| .|...+..++.+...+
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKA-aP---~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKA-AP---GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecC-CC---CcHHHHHHHHHHHHHH
Confidence 457766899999999999999999888 44 4555555421 12455555543 32 2445556666666666
Q ss_pred HHc----CCCC--cEEEcccccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCCEEEcCCcCccccccc
Q 003636 635 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (806)
Q Consensus 635 ~~~----~l~~--~V~flG~~~~~~~~~el~~~la~aaDifV~PS~--~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d 706 (806)
+.. .+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+-+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 432 2345 788886 3333 445555557999998876 89999999999999999999999999999987
Q ss_pred --CCcEEEECCCCHHHHHH
Q 003636 707 --GASGFHIDPYHPDQAAE 723 (806)
Q Consensus 707 --g~~G~li~p~d~e~la~ 723 (806)
++|+|+|-. +.++..+
T Consensus 669 vG~eN~fiFG~-~~~ev~~ 686 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVEA 686 (794)
T ss_pred hCcccEEEcCC-CHHHHHH
Confidence 889999954 5555544
No 135
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.23 E-value=0.16 Score=56.88 Aligned_cols=276 Identities=14% Similarity=0.185 Sum_probs=162.9
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCH
Q 003636 405 QGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (806)
Q Consensus 405 ~~kPDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 483 (806)
+.+||+|..|.-. +.+.++++|...++|++..--++- ..+.+|-. . + .-...=.-||.-+++|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlR-----t~~~~~PE--E-~-------NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLR-----TGDLYFPE--E-I-------NRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccc-----cCCCCCcH--H-H-------HHHHHHHhhhhhcCChH
Confidence 3499999888644 466778999999999876544331 11111110 0 0 01122334666678887
Q ss_pred HHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCC-CCCCCCCCchHHHHHHhhhcchhhhccCcccccc
Q 003636 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (806)
Q Consensus 484 ~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGV-D~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 562 (806)
..++ +....|++ +.++.|+-|-+ |.-.+.- +.+.+ ......
T Consensus 155 ~ar~--------------------nLl~EG~~--~~~IfvtGnt~iDal~~~~------------~~~~~----~~~~~~ 196 (383)
T COG0381 155 IARK--------------------NLLREGVP--EKRIFVTGNTVIDALLNTR------------DRVLE----DSKILA 196 (383)
T ss_pred HHHH--------------------HHHHcCCC--ccceEEeCChHHHHHHHHH------------hhhcc----chhhHH
Confidence 7654 12224554 66788887753 2111100 00000 000000
Q ss_pred c-cCCCCCCCCCEEEEEecCCcC-CCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH-HHcCC
Q 003636 563 H-VGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM-KTYKL 639 (806)
Q Consensus 563 ~-~g~l~~~~k~iI~~vGRL~~~-Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li-~~~~l 639 (806)
. ++. ..++.+++++=|-... +++..+++++.++.++++++.++.--... ..+++.. +.++-
T Consensus 197 ~~~~~--~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~ 260 (383)
T COG0381 197 KGLDD--KDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKN 260 (383)
T ss_pred hhhcc--ccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCC
Confidence 0 111 2345566677676654 99999999999999888777666544332 1233333 45565
Q ss_pred CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCC-cCcccccccCCcEEEECCCCH
Q 003636 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGASGFHIDPYHP 718 (806)
Q Consensus 640 ~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~-GG~~EiI~dg~~G~li~p~d~ 718 (806)
..+|..+. ++...+...++.. | .++++ .-|-..=||-..|+||+.-+. -.-+|.++.| +-.++. .|.
T Consensus 261 ~~~v~li~----pl~~~~f~~L~~~-a-~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~ 328 (383)
T COG0381 261 VERVKLID----PLGYLDFHNLMKN-A-FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDE 328 (383)
T ss_pred CCcEEEeC----CcchHHHHHHHHh-c-eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccH
Confidence 66799986 7788888888885 5 33333 125567899999999999754 3556766544 445554 467
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 719 e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
+.+.+++.+ ++++++..++|+... ..|.=...++++.++...|
T Consensus 329 ~~i~~~~~~----ll~~~~~~~~m~~~~-----npYgdg~as~rIv~~l~~~ 371 (383)
T COG0381 329 ENILDAATE----LLEDEEFYERMSNAK-----NPYGDGNASERIVEILLNY 371 (383)
T ss_pred HHHHHHHHH----HhhChHHHHHHhccc-----CCCcCcchHHHHHHHHHHH
Confidence 777777754 558998888887643 4455555666666655433
No 136
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.21 E-value=0.038 Score=65.25 Aligned_cols=197 Identities=15% Similarity=0.093 Sum_probs=107.3
Q ss_pred CCCceEEEEcC-CCchHHHHHHHHHcCC--cEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEec
Q 003636 405 QGFPDFIIGNY-SDGNLVASLLAYKMGI--TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (806)
Q Consensus 405 ~~kPDlIh~h~-~~~~lva~lla~~lgv--p~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~ 481 (806)
..+||++++-+ ++.|+-....+++.|+ |+++-+= + +-.-|+.-. -+..-+..|.+++.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs---P-----qVWAWR~~R-----------ikki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC---P-----SIWAWRPKR-----------KTILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC---c-----cceeeCcch-----------HHHHHHHhhhheec
Confidence 45999998644 5558765666677885 8765332 1 111222110 01234466888887
Q ss_pred CHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCC-CCCCCCCCCchHHHHHHhhhcchhhhccCcccc
Q 003636 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (806)
Q Consensus 482 S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnG-VD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 560 (806)
=+-|.+ +|+. +|+ ++..|-+. +|.-...+..+. .
T Consensus 369 fPFE~~-------------------~y~~-~gv-----~v~yVGHPL~d~i~~~~~~~~--------------------~ 403 (608)
T PRK01021 369 LPFEQN-------------------LFKD-SPL-----RTVYLGHPLVETISSFSPNLS--------------------W 403 (608)
T ss_pred CccCHH-------------------HHHh-cCC-----CeEEECCcHHhhcccCCCHHH--------------------H
Confidence 766654 2321 333 35555443 343221222211 1
Q ss_pred ccccCCCCCCCCCEE-EEEec-CCc-CCCHHHHHHHHH--HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003636 561 DEHVGTLSDRSKPIV-FSMAR-LDH-VKNMTGLVECYG--KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (806)
Q Consensus 561 ~~~~g~l~~~~k~iI-~~vGR-L~~-~Kgi~~Llea~~--~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (806)
++++|+ ++++++| +..|. -.+ .+.+..+++++. ++.+ +.++++...... ..+.+.+.++
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~~~-----------~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS---THQLLVSSANPK-----------YDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCchh-----------hHHHHHHHHh
Confidence 244676 4555654 44443 333 456778888887 4433 577776433211 1233444444
Q ss_pred HcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 636 ~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
..+. -.+..+. .++-++.++ +||+.+..| |.+.+|++.+|+|.|+.
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVT 513 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEE
Confidence 3321 1233331 112367777 599999876 99999999999999986
No 137
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.19 E-value=0.056 Score=58.72 Aligned_cols=170 Identities=11% Similarity=0.064 Sum_probs=115.0
Q ss_pred CCEEEEEecC-CcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003636 572 KPIVFSMARL-DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (806)
Q Consensus 572 k~iI~~vGRL-~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~ 650 (806)
.++.+-+|.= |+-.+...+++++.+... .++++++.=+-|. ...+|++++.+..+++--.+++..+-
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~--- 212 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT--- 212 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh---
Confidence 3555666665 466677777787776543 5788887766543 12467888999998887657888876
Q ss_pred CcCChHHHHHHHHccCcEEEECC-CCCCCcHHHHHHHHcCCCEEEc-CCcCcccccccCCcEEEECCCCHHHHHHHHHHH
Q 003636 651 NRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (806)
Q Consensus 651 ~~~~~~el~~~la~aaDifV~PS-~~E~fGltvlEAMa~GlPVVAt-~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~ 728 (806)
+.++.+|...+++. +|+.++-- +.+|.|+ +.=.+..|+||+.+ +..-..+..+.|. -++++.++.+ ..+.+
T Consensus 213 e~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv-~Vlf~~d~L~---~~~v~- 285 (322)
T PRK02797 213 EKLPFDDYLALLRQ-CDLGYFIFARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGL-PVLFTGDDLD---EDIVR- 285 (322)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCC-eEEecCCccc---HHHHH-
Confidence 57889999999995 99988765 6788885 45588999999998 4555666665554 3334433321 11211
Q ss_pred HHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003636 729 FGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVY 770 (806)
Q Consensus 729 l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~ 770 (806)
+..+++...-++.|. |+-+.+.+.+.+++...
T Consensus 286 --------e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~~ 317 (322)
T PRK02797 286 --------EAQRQLASVDKNIIA--FFSPNYLQGWRNALAIA 317 (322)
T ss_pred --------HHHHHHHhhCcceee--ecCHhHHHHHHHHHHHh
Confidence 122334455555553 89999999998887643
No 138
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.12 E-value=0.26 Score=56.71 Aligned_cols=141 Identities=11% Similarity=0.114 Sum_probs=74.3
Q ss_pred HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCc
Q 003636 588 TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 667 (806)
Q Consensus 588 ~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaD 667 (806)
..+.+++..+.+. +.+++++-.-.. .++..+.. ....+++.+.+.-..+++.+. +.....++..+++. +|
T Consensus 260 ~~la~~i~~Li~~--g~~Vv~lp~~~~-~~~~~~dD---~~~~~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~d 329 (426)
T PRK10017 260 KAFAGVVNRIIDE--GYQVIALSTCTG-IDSYNKDD---RMVALNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CE 329 (426)
T ss_pred HHHHHHHHHHHHC--CCeEEEEecccC-ccCCCCch---HHHHHHHHHhcccccceeEec---CCCChHHHHHHHhh-CC
Confidence 3455666666554 455555543211 00111111 222334444444344455443 13345688899995 99
Q ss_pred EEEECCCCCCCcHHHHHHHHcCCCEEEcCC----cCcccccccCCcEEEECC--CCHHHHHHHHHHHHHhhcCCHHHHHH
Q 003636 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEHGASGFHIDP--YHPDQAAELMADFFGKCKENPSHWKK 741 (806)
Q Consensus 668 ifV~PS~~E~fGltvlEAMa~GlPVVAt~~----GG~~EiI~dg~~G~li~p--~d~e~la~aI~~~l~~l~~dp~~~~~ 741 (806)
++|-.-. -..+=|++.|+|+|+-.. -|..+.+ |...++++. -+.+++.+.+.+ +++|.+.+++
T Consensus 330 l~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l--g~~~~~~~~~~l~~~~Li~~v~~----~~~~r~~~~~ 398 (426)
T PRK10017 330 LTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL--GLPEMAIDIRHLLDGSLQAMVAD----TLGQLPALNA 398 (426)
T ss_pred EEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--CCccEEechhhCCHHHHHHHHHH----HHhCHHHHHH
Confidence 9886543 357889999999999743 3344444 323344443 345667777644 4567655544
Q ss_pred HHHHHHHH
Q 003636 742 ISDGGLKR 749 (806)
Q Consensus 742 ms~~ar~~ 749 (806)
--+.+.+.
T Consensus 399 ~l~~~v~~ 406 (426)
T PRK10017 399 RLAEAVSR 406 (426)
T ss_pred HHHHHHHH
Confidence 33333333
No 139
>PLN02554 UDP-glycosyltransferase family protein
Probab=97.03 E-value=0.88 Score=53.29 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=51.4
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC----CcCcc-cccccCCcEEEECC
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPA-EIIEHGASGFHIDP 715 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~----~GG~~-EiI~dg~~G~li~p 715 (806)
+++.+.+ .++..++... . +.++||.= -| -++++||+.+|+|+|+-. .-..+ ..++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555556 4555555531 1 34556532 22 358999999999999973 33344 34555456776641
Q ss_pred -------------CCHHHHHHHHHHHHHhhcCCHHHHHH
Q 003636 716 -------------YHPDQAAELMADFFGKCKENPSHWKK 741 (806)
Q Consensus 716 -------------~d~e~la~aI~~~l~~l~~dp~~~~~ 741 (806)
-+.++++++|.+++. +|++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 256778888866652 25544433
No 140
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.99 E-value=0.0077 Score=60.39 Aligned_cols=109 Identities=21% Similarity=0.316 Sum_probs=62.9
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEE----ecCCCcc-cC-CCChhhHhhhhhhhhchhhhhH
Q 003636 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTI----AHALEKT-KY-PDSDIYWKKFDEKYHFSCQFTA 467 (806)
Q Consensus 395 ~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~l-gvp~v~t----~H~l~~~-k~-~~s~~~~~~l~~~y~~~~~~~~ 467 (806)
.+...+++. +..||||++|...+.. ..+...+ ++|++.- +|+-... .+ ++... ......+...+-..
T Consensus 55 ~a~~~L~~~-Gf~PDvI~~H~GWGe~--Lflkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~---~~~~~~~~r~rN~~ 128 (171)
T PF12000_consen 55 RAARQLRAQ-GFVPDVIIAHPGWGET--LFLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPP---SLDDRARLRMRNAH 128 (171)
T ss_pred HHHHHHHHc-CCCCCEEEEcCCcchh--hhHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCC---CHHHHHHHHHHhHH
Confidence 344444444 7789999999877643 2344445 6776542 2221111 00 01111 11222233333445
Q ss_pred HHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCC
Q 003636 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (806)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f 533 (806)
....+..||..|++|...+. +| |. .+.+|+.||+-|||++.+
T Consensus 129 ~l~~l~~~D~~isPT~wQ~~-------~f--------P~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 129 NLLALEQADAGISPTRWQRS-------QF--------PA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHHhCCcCcCCCHHHHH-------hC--------CH---------HHHcCcEEeecccchhhc
Confidence 66789999999999987654 22 21 236799999999999865
No 141
>PLN03007 UDP-glucosyltransferase family protein
Probab=96.87 E-value=0.69 Score=54.17 Aligned_cols=78 Identities=10% Similarity=0.098 Sum_probs=45.1
Q ss_pred CCcEEEcccccCcCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCCEEEcCC----cCccccccc-CCcEEE
Q 003636 640 DGQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH-GASGFH 712 (806)
Q Consensus 640 ~~~V~flG~~~~~~~~~el~~~la~aaD--ifV~PS~~E~fGltvlEAMa~GlPVVAt~~----GG~~EiI~d-g~~G~l 712 (806)
..++...+ .++..++.. .++ +||.= -| -++++||+++|+|+|+-.. .-.+..+.+ -+.|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~----h~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD----HQATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc----cCccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 34577766 455555554 243 46642 22 3589999999999999733 333333321 123443
Q ss_pred EC----------CCCHHHHHHHHHHHH
Q 003636 713 ID----------PYHPDQAAELMADFF 729 (806)
Q Consensus 713 i~----------p~d~e~la~aI~~~l 729 (806)
+. .-+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 31 126778888886655
No 142
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.66 E-value=2.1 Score=50.15 Aligned_cols=79 Identities=15% Similarity=0.115 Sum_probs=48.9
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc----CCcCccccccc-CCcEEEECC
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP 715 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt----~~GG~~EiI~d-g~~G~li~p 715 (806)
.++++.+ .++..++..- .+.++||.- -| -++++||+++|+|+|+- +..-.+..+.+ -+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTH---CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEec---CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 3566666 4555555441 125667753 22 35899999999999996 34444454443 367776632
Q ss_pred -----CCHHHHHHHHHHHH
Q 003636 716 -----YHPDQAAELMADFF 729 (806)
Q Consensus 716 -----~d~e~la~aI~~~l 729 (806)
-+.+++++++.+++
T Consensus 413 ~~~~~~~~~~v~~~v~~~m 431 (477)
T PLN02863 413 GADTVPDSDELARVFMESV 431 (477)
T ss_pred CCCCCcCHHHHHHHHHHHh
Confidence 25678888887655
No 143
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.63 E-value=2.1 Score=49.75 Aligned_cols=93 Identities=12% Similarity=0.129 Sum_probs=56.3
Q ss_pred CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc----CCcCcccccccC-CcEEEEC
Q 003636 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID 714 (806)
Q Consensus 640 ~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt----~~GG~~EiI~dg-~~G~li~ 714 (806)
.+++.+.+ .++..++...= +.++||.- +-.++++||+++|+|+|+- +..-.+..+.+. +.|+-+.
T Consensus 316 ~~~~~i~~----W~PQ~~iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~ 385 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK 385 (449)
T ss_pred CCceEEeC----CCCHHHHhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe
Confidence 35677777 55555555420 12355542 2246899999999999997 344455566653 5677664
Q ss_pred CC------CHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003636 715 PY------HPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (806)
Q Consensus 715 p~------d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar 747 (806)
.. +.+++++++.+++ .+++ .+++.++++
T Consensus 386 ~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~ 419 (449)
T PLN02173 386 AEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAG 419 (449)
T ss_pred ecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHH
Confidence 21 5688888887765 4543 244444443
No 144
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=96.62 E-value=0.005 Score=74.30 Aligned_cols=151 Identities=14% Similarity=0.043 Sum_probs=107.9
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHH-HHH---HHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVE---CYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~-Lle---a~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (806)
+.|+..+++...++++-|+...|...+ ++. .+.++++.. ....+++.|.... .|...+..++.+..++
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 595 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 595 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 446666889999999999999999888 544 455554431 1255666555433 3455566666677776
Q ss_pred HHc----CCCC--cEEEcccccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCCEEEcCCcCccccccc
Q 003636 635 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (806)
Q Consensus 635 ~~~----~l~~--~V~flG~~~~~~~~~el~~~la~aaDifV~PS~--~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d 706 (806)
+.. .+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|.+=+-+|.-|.++++|-.|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 544 2344 788886 3333 455555557999998875 89999999999999999999999999999976
Q ss_pred --CCcEEEECCCCHHHHHH
Q 003636 707 --GASGFHIDPYHPDQAAE 723 (806)
Q Consensus 707 --g~~G~li~p~d~e~la~ 723 (806)
+.|||.|-. +.+++.+
T Consensus 671 vG~eN~f~fG~-~~~ev~~ 688 (798)
T PRK14985 671 VGEENIFIFGH-TVEQVKA 688 (798)
T ss_pred hCcCcEEEeCC-CHHHHHH
Confidence 789999964 4554433
No 145
>PLN02208 glycosyltransferase family protein
Probab=96.59 E-value=2.2 Score=49.50 Aligned_cols=64 Identities=5% Similarity=0.021 Sum_probs=42.3
Q ss_pred HHHHHHHHcCCCEEEc----CCcCccccccc-CCcEEEECC-----CCHHHHHHHHHHHHHhhcCCH-HHHHHHHHHHH
Q 003636 680 LTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP-----YHPDQAAELMADFFGKCKENP-SHWKKISDGGL 747 (806)
Q Consensus 680 ltvlEAMa~GlPVVAt----~~GG~~EiI~d-g~~G~li~p-----~d~e~la~aI~~~l~~l~~dp-~~~~~ms~~ar 747 (806)
++++||+++|+|+|+- +....+..+.+ -+.|..++. -+.++++++|.+++ .++ +..+++.++++
T Consensus 340 nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~ 414 (442)
T PLN02208 340 GTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHT 414 (442)
T ss_pred hHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 5899999999999997 33334554444 457877754 25678888887665 454 34455555544
No 146
>PLN02562 UDP-glycosyltransferase
Probab=96.37 E-value=2.9 Score=48.54 Aligned_cols=138 Identities=13% Similarity=0.088 Sum_probs=79.1
Q ss_pred CCCEEEEEecCC---cCCCHHHHHHHHHHhhccCCCeEEEE-EeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003636 571 SKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (806)
Q Consensus 571 ~k~iI~~vGRL~---~~Kgi~~Llea~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~fl 646 (806)
+..++++.|... ..+-+..++.++.++. .++++ +..+.. +. .-+.+.+ + ..+++...
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g-----~~fiW~~~~~~~-------~~--l~~~~~~---~--~~~~~~v~ 333 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASG-----RPFIWVLNPVWR-------EG--LPPGYVE---R--VSKQGKVV 333 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCC-----CCEEEEEcCCch-------hh--CCHHHHH---H--hccCEEEE
Confidence 456888999864 3344555666666553 24554 332111 00 0001111 1 23567766
Q ss_pred ccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc----CCcCcccccccC-CcEEEECCCCHHHH
Q 003636 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHIDPYHPDQA 721 (806)
Q Consensus 647 G~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt----~~GG~~EiI~dg-~~G~li~p~d~e~l 721 (806)
+ .++..++... . +.++||.= -| -++++||+.+|+|+|+- +....+..+.+. +.|+-+..-+.+++
T Consensus 334 ~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l 403 (448)
T PLN02562 334 S----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEV 403 (448)
T ss_pred e----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHH
Confidence 6 5566666652 1 13355532 22 35899999999999986 444455666543 56777755678889
Q ss_pred HHHHHHHHHhhcCCHHHHHH
Q 003636 722 AELMADFFGKCKENPSHWKK 741 (806)
Q Consensus 722 a~aI~~~l~~l~~dp~~~~~ 741 (806)
+++|.+++ .|++++++
T Consensus 404 ~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 404 EEGLRKVM----EDSGMGER 419 (448)
T ss_pred HHHHHHHh----CCHHHHHH
Confidence 98887665 67665543
No 147
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=96.36 E-value=0.16 Score=61.03 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=94.7
Q ss_pred ccCCCCCCCCCEEEEEecCCcCCCHHHH----HHHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003636 563 HVGTLSDRSKPIVFSMARLDHVKNMTGL----VECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (806)
Q Consensus 563 ~~g~l~~~~k~iI~~vGRL~~~Kgi~~L----lea~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (806)
..|+..+++...++++-|+...|...+. ++-+.++++. ...+.+++.|.... .|...++.++.+.+++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVA 510 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 4455557888889999999999998883 4556666543 12356666665433 3556666676666666
Q ss_pred HH----cCCCC--cEEEcccccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHHHHHHHcCCCEEEcCCcCccccccc
Q 003636 635 KT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (806)
Q Consensus 635 ~~----~~l~~--~V~flG~~~~~~~~~el~~~la~aaDifV~PS~--~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~d 706 (806)
+. ..+.+ +|.|+- ..+ =.+.+.+-.++|+-.+.|+ .|+.|.+-+=||.-|.+.++|-.|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFle----nYd-vslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLE----NYD-VSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEET----T-S-HHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeec----CCc-HHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 53 23445 788986 333 3566666668999999875 89999999999999999999999999999854
Q ss_pred --CCcEEEECCCCHHH
Q 003636 707 --GASGFHIDPYHPDQ 720 (806)
Q Consensus 707 --g~~G~li~p~d~e~ 720 (806)
..|+|+|-. +.++
T Consensus 586 vG~eN~fiFG~-~~~e 600 (713)
T PF00343_consen 586 VGEENIFIFGL-TAEE 600 (713)
T ss_dssp H-GGGSEEES--BHHH
T ss_pred cCCCcEEEcCC-CHHH
Confidence 458888843 3444
No 148
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.32 E-value=0.3 Score=53.90 Aligned_cols=128 Identities=11% Similarity=0.049 Sum_probs=89.4
Q ss_pred CCEEEEEecC-CcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003636 572 KPIVFSMARL-DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (806)
Q Consensus 572 k~iI~~vGRL-~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~ 650 (806)
++.-+.+|.= ++..|.-.+++++.+.. ..++++++-=+-+. ...++++++.+.++++--.+++..+-
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh---
Confidence 4455556654 56667777777776633 35677766544433 13467888999998876566787764
Q ss_pred CcCChHHHHHHHHccCcEEEECC-CCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEE
Q 003636 651 NRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713 (806)
Q Consensus 651 ~~~~~~el~~~la~aaDifV~PS-~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li 713 (806)
+.++.+|..++++. +|+.++.. +..|.|+ +.=.+.+|+||+.+...-.-....+..--+++
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf 313 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLF 313 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEe
Confidence 47889999999995 99999987 5788885 56689999999999766655555443333444
No 149
>PLN02210 UDP-glucosyl transferase
Probab=96.03 E-value=4.3 Score=47.26 Aligned_cols=133 Identities=13% Similarity=0.150 Sum_probs=70.8
Q ss_pred CCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003636 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (806)
Q Consensus 571 ~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~ 650 (806)
+..+.+++|.+... ..+.+-+.+..+... +.+|+++=.... ...+ ...+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~--~~~~------~~~~~~~~~----~~~g~v~~--- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKE--KAQN------VQVLQEMVK----EGQGVVLE--- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCc--cccc------hhhHHhhcc----CCCeEEEe---
Confidence 45678888987542 334444444444433 345555432111 0001 111222211 13333445
Q ss_pred CcCChHHHHHHHHcc-CcEEEECCCCCCCcHHHHHHHHcCCCEEEcC----CcCccccccc-CCcEEEECC------CCH
Q 003636 651 NRARNGELYRYIADT-KGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHIDP------YHP 718 (806)
Q Consensus 651 ~~~~~~el~~~la~a-aDifV~PS~~E~fGltvlEAMa~GlPVVAt~----~GG~~EiI~d-g~~G~li~p------~d~ 718 (806)
.++..++.. +. .++||.= -|+ ++++||+.+|+|+|+-. ..-.+..+.+ -+.|..+.. -+.
T Consensus 331 -w~PQ~~iL~---h~~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 -WSPQEKILS---HMAISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred -cCCHHHHhc---CcCcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 455555544 31 2466642 222 48999999999999963 3334555555 467877742 367
Q ss_pred HHHHHHHHHHH
Q 003636 719 DQAAELMADFF 729 (806)
Q Consensus 719 e~la~aI~~~l 729 (806)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 78888887665
No 150
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.90 E-value=0.042 Score=48.54 Aligned_cols=72 Identities=18% Similarity=0.087 Sum_probs=51.7
Q ss_pred CCceEEEEecCCCcccccccccccCCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEE
Q 003636 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTI 436 (806)
Q Consensus 359 ~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~--~lva~lla~~lgvp~v~t 436 (806)
+.+.++..+|+... ......|.+-...+-+...+.+ ++.||||+|.+.+ +.-+.+-|+.+|++.|+|
T Consensus 13 tngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ilir---E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILIR---ERIDIVHGHQAFSTLCHEAILHARTMGLKTVFT 81 (90)
T ss_pred CCCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHHH---cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEee
Confidence 34689999998752 2344555554444444444454 4999999999876 456788899999999999
Q ss_pred ecCCC
Q 003636 437 AHALE 441 (806)
Q Consensus 437 ~H~l~ 441 (806)
-|++.
T Consensus 82 DHSLf 86 (90)
T PF08288_consen 82 DHSLF 86 (90)
T ss_pred ccccc
Confidence 99874
No 151
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.83 E-value=0.22 Score=55.70 Aligned_cols=91 Identities=15% Similarity=0.092 Sum_probs=56.8
Q ss_pred CEE-EEEecCC-c-CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 003636 573 PIV-FSMARLD-H-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (806)
Q Consensus 573 ~iI-~~vGRL~-~-~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~ 649 (806)
++| ++.|.-. + .+.+..+++++.++.+.. ..+++.|.. . .+.+.+...+. ..+.+.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~-~------------~~~i~~~~~~~---~~~~~~~-- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFF-K------------GKDLKEIYGDI---SEFEISY-- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCC-c------------HHHHHHHHhcC---CCcEEec--
Confidence 444 4444432 1 355666779998887653 667776653 2 12333333322 2344443
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC
Q 003636 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (806)
Q Consensus 650 ~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~ 696 (806)
+.+.+++ +||+.+..| |.+.+|++.+|+|.|..-
T Consensus 228 -------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 -------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred -------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 3456777 599888765 888899999999999863
No 152
>PLN02670 transferase, transferring glycosyl groups
Probab=95.73 E-value=5.8 Score=46.39 Aligned_cols=85 Identities=14% Similarity=0.088 Sum_probs=52.2
Q ss_pred cHHHHHHHHcCCCEEEc----CCcCcccccccCCcEEEECC------CCHHHHHHHHHHHHHhhcCCH---HHHHHHHHH
Q 003636 679 GLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDP------YHPDQAAELMADFFGKCKENP---SHWKKISDG 745 (806)
Q Consensus 679 GltvlEAMa~GlPVVAt----~~GG~~EiI~dg~~G~li~p------~d~e~la~aI~~~l~~l~~dp---~~~~~ms~~ 745 (806)
-++++||+++|+|+|+- +....+..+++-+.|..++. -+.++++++|.+++ .++ +++++. ++
T Consensus 367 wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm----~~~~g~~~r~~a-~~ 441 (472)
T PLN02670 367 WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAM----VDDAGEEIRDKA-KE 441 (472)
T ss_pred cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHh----cCcchHHHHHHH-HH
Confidence 35899999999999997 44445556666678887753 24778888887665 454 233222 22
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHH
Q 003636 746 GLKRIYERYTWKIYSERLMTLAG 768 (806)
Q Consensus 746 ar~~v~~~ysw~~~a~~ll~ly~ 768 (806)
-++.+.++=+-..+++.+.+...
T Consensus 442 l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 442 MRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred HHHHHhCcchhHHHHHHHHHHHH
Confidence 22233344455666666665443
No 153
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.71 E-value=1.4 Score=47.91 Aligned_cols=111 Identities=12% Similarity=0.137 Sum_probs=61.8
Q ss_pred CcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHH
Q 003636 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRY 661 (806)
Q Consensus 582 ~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~ 661 (806)
...++++.+.++++.+++.. .|++-.. ++.++..+.+. ++... .-.. +-..+
T Consensus 198 ~g~~~~~~~~~li~~l~k~g----iV~ipr~---------------~~~~eife~~~---n~i~p-----k~~v-D~l~L 249 (346)
T COG1817 198 NGDRGISVLPDLIKELKKYG----IVLIPRE---------------KEQAEIFEGYR---NIIIP-----KKAV-DTLSL 249 (346)
T ss_pred ccccchhhHHHHHHHHHhCc----EEEecCc---------------hhHHHHHhhhc---cccCC-----cccc-cHHHH
Confidence 34678888888888887643 3443322 12344444442 12111 1111 21223
Q ss_pred HHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCc---CcccccccCCcEEEECCCCHHHHHHHHHHH
Q 003636 662 IADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (806)
Q Consensus 662 la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~G---G~~EiI~dg~~G~li~p~d~e~la~aI~~~ 728 (806)
+. -|++++ .+-|.---||...|+|+|.+.-| +..+...+ .|.++..+|+.+..+...+.
T Consensus 250 ly-ya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~lie--~G~~~~s~~~~~~~~~a~~~ 311 (346)
T COG1817 250 LY-YATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLIE--KGLLYHSTDEIAIVEYAVRN 311 (346)
T ss_pred Hh-hhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHHh--cCceeecCCHHHHHHHHHHH
Confidence 33 255655 33355668999999999999744 23333333 67888878887666555443
No 154
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.68 E-value=0.9 Score=50.11 Aligned_cols=109 Identities=16% Similarity=0.121 Sum_probs=67.2
Q ss_pred CCCCEEEEEecCCcCC--CHH---HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-
Q 003636 570 RSKPIVFSMARLDHVK--NMT---GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF- 643 (806)
Q Consensus 570 ~~k~iI~~vGRL~~~K--gi~---~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V- 643 (806)
+.+.+.+.+|.=.+.- +.+ .+++.+.++.+..+ ..+.|..+-..+ .+..+.+.+..+ -.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~~~---~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALRELLK---DNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHhhc---CCCceE
Confidence 4556677888644322 223 56666666666554 788888877652 122333433332 33566
Q ss_pred EEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcC
Q 003636 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (806)
Q Consensus 644 ~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG 699 (806)
.|-+ . ..+-+..+++ .||.+|++.-. -.-+-||.++|+||..-...+
T Consensus 213 ~~~~--~---~~nPy~~~La-~ad~i~VT~DS---vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWDG--T---GENPYLGFLA-AADAIVVTEDS---VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EecC--C---CCCcHHHHHH-hCCEEEEcCcc---HHHHHHHHHcCCCEEEecCCC
Confidence 5533 2 2334677888 49999998542 224689999999999987766
No 155
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=95.58 E-value=3.6 Score=45.66 Aligned_cols=133 Identities=17% Similarity=0.195 Sum_probs=77.2
Q ss_pred CCCCEEEEEecCCcCCCHHHH---HHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003636 570 RSKPIVFSMARLDHVKNMTGL---VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (806)
Q Consensus 570 ~~k~iI~~vGRL~~~Kgi~~L---lea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~fl 646 (806)
.+..+++++|.= .-|-+.+ ++|+..+....+ .-++|.|.... .+..+++...+ .-.++|...
T Consensus 218 E~~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP---------~~~r~~l~~~A---~~~p~i~I~ 282 (400)
T COG4671 218 EGFDILVSVGGG--ADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP---------EAQRQKLLASA---PKRPHISIF 282 (400)
T ss_pred ccceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC---------HHHHHHHHHhc---ccCCCeEEE
Confidence 456678888843 3344333 344444344332 34666776655 12334443333 334678887
Q ss_pred ccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccc--ccc------cCCcEEEECCC--
Q 003636 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE--IIE------HGASGFHIDPY-- 716 (806)
Q Consensus 647 G~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~E--iI~------dg~~G~li~p~-- 716 (806)
-+. .++..+++ +|+..|.=+-| +|+.|-++.|||.+.-..+.+.| .+. =|-..++. |.
T Consensus 283 ~f~------~~~~~ll~-gA~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~-pe~l 350 (400)
T COG4671 283 EFR------NDFESLLA-GARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLL-PENL 350 (400)
T ss_pred Ehh------hhHHHHHH-hhheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeC-cccC
Confidence 643 46788888 48888865432 68999999999999875555444 221 13333333 44
Q ss_pred CHHHHHHHHHHHH
Q 003636 717 HPDQAAELMADFF 729 (806)
Q Consensus 717 d~e~la~aI~~~l 729 (806)
+++.+|++|...+
T Consensus 351 t~~~La~al~~~l 363 (400)
T COG4671 351 TPQNLADALKAAL 363 (400)
T ss_pred ChHHHHHHHHhcc
Confidence 4677777775544
No 156
>PLN00414 glycosyltransferase family protein
Probab=95.49 E-value=6.7 Score=45.53 Aligned_cols=87 Identities=6% Similarity=0.017 Sum_probs=53.5
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC----CcCcccccc-cCCcEEEECC-----CCHHHH
Q 003636 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIE-HGASGFHIDP-----YHPDQA 721 (806)
Q Consensus 652 ~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~----~GG~~EiI~-dg~~G~li~p-----~d~e~l 721 (806)
.++..++... . +.+.||.- +--++++||+++|+|+|+-. .--.+..+. .-+.|..+.. -+.+++
T Consensus 319 w~PQ~~vL~h-~-~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 319 WVEQPLILSH-P-SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred cCCHHHHhcC-C-ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHH
Confidence 4555565542 1 23567743 22468999999999999973 333455553 4567877742 367788
Q ss_pred HHHHHHHHHhhcCCH-HHHHHHHHHHHH
Q 003636 722 AELMADFFGKCKENP-SHWKKISDGGLK 748 (806)
Q Consensus 722 a~aI~~~l~~l~~dp-~~~~~ms~~ar~ 748 (806)
++++.+++ .++ +..+++.+++++
T Consensus 393 ~~~v~~~m----~~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 393 RDTVKSVM----DKDSEIGNLVKRNHKK 416 (446)
T ss_pred HHHHHHHh----cCChhhHHHHHHHHHH
Confidence 88887665 443 445555555553
No 157
>PLN02555 limonoid glucosyltransferase
Probab=95.44 E-value=7.4 Score=45.64 Aligned_cols=94 Identities=13% Similarity=0.143 Sum_probs=56.8
Q ss_pred CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC----CcCcccccccC-CcEEEEC
Q 003636 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-ASGFHID 714 (806)
Q Consensus 640 ~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~----~GG~~EiI~dg-~~G~li~ 714 (806)
.+++...+ .++..++... . +.++||.- -| -++++||+.+|+|+|+-. .......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45666666 5565665532 1 35667643 22 458999999999999973 34445555554 6777762
Q ss_pred -----C--CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 003636 715 -----P--YHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (806)
Q Consensus 715 -----p--~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~ 748 (806)
. -+.++++++|.+++ .++ ..++|.++|++
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~-~g~~~r~ra~~ 441 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGE-KAAELKQNALK 441 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCc-hHHHHHHHHHH
Confidence 1 14678888887665 443 23445554443
No 158
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=95.06 E-value=9.1 Score=44.52 Aligned_cols=92 Identities=12% Similarity=0.154 Sum_probs=56.2
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc----CCcCcccccccC-CcEEEEC-
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID- 714 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt----~~GG~~EiI~dg-~~G~li~- 714 (806)
++....+ .++..++... . +.+.||.- -| -++++||+++|+|+|+- +....+..+.+. +.|+-+.
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSH---CG-WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeec---Cc-hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5555556 5666666552 1 24456643 22 35899999999999996 444455555544 5787763
Q ss_pred CCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003636 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (806)
Q Consensus 715 p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar 747 (806)
.-+.++++++|.+++ .+++ .+++.++++
T Consensus 394 ~~~~~~v~~av~~lm----~~~~-~~~~r~~a~ 421 (451)
T PLN02410 394 DLDRGAVERAVKRLM----VEEE-GEEMRKRAI 421 (451)
T ss_pred cccHHHHHHHHHHHH----cCCc-HHHHHHHHH
Confidence 336788888887665 5543 334444443
No 159
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=95.05 E-value=1.3 Score=47.52 Aligned_cols=140 Identities=18% Similarity=0.283 Sum_probs=80.0
Q ss_pred CCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003636 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (806)
Q Consensus 571 ~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~ 650 (806)
.+.+++++|.-|+ ||++ .+.++.+.+. ++++.||-+..+| ....+...++++ +++.+.-
T Consensus 158 ~r~ilI~lGGsDp-k~lt--~kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~~---~~i~~~~--- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLT--LKVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEKY---PNINLYI--- 216 (318)
T ss_pred hheEEEEccCCCh-hhhH--HHHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhhC---CCeeeEe---
Confidence 4457888887666 6654 3444444432 3666555443221 134455555544 6777754
Q ss_pred CcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEE----cCCcCccccccc----CCcEEEECCCCHHHHH
Q 003636 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPAEIIEH----GASGFHIDPYHPDQAA 722 (806)
Q Consensus 651 ~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVA----t~~GG~~EiI~d----g~~G~li~p~d~e~la 722 (806)
..+++.+++.+ +|..+.. -|.|+.||...|+|..+ .+.-..+..... ...|++.. .....
T Consensus 217 ---~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l~---~~~~~ 284 (318)
T COG3980 217 ---DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHLK---DLAKD 284 (318)
T ss_pred ---cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCCc---hHHHH
Confidence 45678889986 8887754 38999999999999333 232222222211 22455532 23333
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHH
Q 003636 723 ELMADFFGKCKENPSHWKKISDGGL 747 (806)
Q Consensus 723 ~aI~~~l~~l~~dp~~~~~ms~~ar 747 (806)
..+. .+.+|+..+..++..+.
T Consensus 285 ~~~~----~i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEIL----QIQKDYARRKNLSFGSK 305 (318)
T ss_pred HHHH----HhhhCHHHhhhhhhccc
Confidence 4443 33478887777766543
No 160
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=93.99 E-value=4.1 Score=49.84 Aligned_cols=152 Identities=13% Similarity=0.147 Sum_probs=108.4
Q ss_pred CCCCEEEEEecCCcCCCHHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH----cCC--
Q 003636 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT----YKL-- 639 (806)
Q Consensus 570 ~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~----~~l-- 639 (806)
.++.+|+-+-|++..||+..=+.++.++...+| .+.++.+..+.... ..+-......+...+.+ .+-
T Consensus 274 ~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~---~~~v~~~k~~v~~~v~rIn~~f~~~~ 350 (732)
T KOG1050|consen 274 KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTD---GKEVEELKFCVSVHVRRINEKFGSAS 350 (732)
T ss_pred cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCccc---chHHHHHHHHhHhhhhhhhhccCCcc
Confidence 477899999999999999887777777665544 57777777665411 11111112222222222 121
Q ss_pred CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcC----CCEEEcCCcCcccccccCCcEEEECC
Q 003636 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATCHGGPAEIIEHGASGFHIDP 715 (806)
Q Consensus 640 ~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~G----lPVVAt~~GG~~EiI~dg~~G~li~p 715 (806)
...|+++- ..++..++.++++ .+|+....++-+|..++.+|+..|. .+.|.+..-|..+..+++ ..+++|
T Consensus 351 ~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~--aivvnp 424 (732)
T KOG1050|consen 351 YQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA--AIVVNP 424 (732)
T ss_pred cceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceEEeeecccccccccc--CEEECC
Confidence 12344443 3677889999999 5999999999999999999999883 778888888888887554 578899
Q ss_pred CCHHHHHHHHHHHHH
Q 003636 716 YHPDQAAELMADFFG 730 (806)
Q Consensus 716 ~d~e~la~aI~~~l~ 730 (806)
.|.++++..|..++.
T Consensus 425 w~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 425 WDGDEFAILISKALT 439 (732)
T ss_pred cchHHHHHHHHHHhh
Confidence 999999999987763
No 161
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=93.48 E-value=0.53 Score=52.80 Aligned_cols=133 Identities=11% Similarity=0.155 Sum_probs=65.5
Q ss_pred cccCCCCCCCCCEEEEEecCCcCCCH------HHH--HHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003636 562 EHVGTLSDRSKPIVFSMARLDHVKNM------TGL--VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (806)
Q Consensus 562 ~~~g~l~~~~k~iI~~vGRL~~~Kgi------~~L--lea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (806)
+.+|+ +.++.+|+|+-........ ... .+.+.. ...+++.+++-..... ...
T Consensus 184 ~~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp~~----------------~~~ 243 (369)
T PF04464_consen 184 KKLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHPNM----------------KKK 243 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SHHH----------------HTT
T ss_pred HHhcc--CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCchh----------------hhc
Confidence 34565 6677899999766543222 111 222222 2235787776654321 111
Q ss_pred HHH-cCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc--CC-------cCcccc
Q 003636 634 MKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT--CH-------GGPAEI 703 (806)
Q Consensus 634 i~~-~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt--~~-------GG~~Ei 703 (806)
... ....++|.++. +..++..++. .+|++|. -++-++.|++.+++|||-. +. |...+
T Consensus 244 ~~~~~~~~~~i~~~~------~~~~~~~ll~-~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~- 310 (369)
T PF04464_consen 244 FKDFKEDNSNIIFVS------DNEDIYDLLA-AADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD- 310 (369)
T ss_dssp ----TT-TTTEEE-T------T-S-HHHHHH-T-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--
T ss_pred hhhhhccCCcEEECC------CCCCHHHHHH-hcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-
Confidence 111 34457788865 2347888888 4999984 3566899999999999954 32 22223
Q ss_pred cccCCcEEEECCCCHHHHHHHHHHHH
Q 003636 704 IEHGASGFHIDPYHPDQAAELMADFF 729 (806)
Q Consensus 704 I~dg~~G~li~p~d~e~la~aI~~~l 729 (806)
..+...|-.+. +.+++.++|.+++
T Consensus 311 ~~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 311 YEEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TTTSSSS-EES--SHHHHHHHHTTHH
T ss_pred hHhhCCCceeC--CHHHHHHHHHhhh
Confidence 22333455554 7899999886654
No 162
>PLN00164 glucosyltransferase; Provisional
Probab=93.31 E-value=21 Score=41.92 Aligned_cols=64 Identities=9% Similarity=0.046 Sum_probs=40.7
Q ss_pred HHHHHHHHcCCCEEEc----CCcCccccc-ccCCcEEEECC-------CCHHHHHHHHHHHHHhhcCCHH-HHHHHHHHH
Q 003636 680 LTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP-------YHPDQAAELMADFFGKCKENPS-HWKKISDGG 746 (806)
Q Consensus 680 ltvlEAMa~GlPVVAt----~~GG~~EiI-~dg~~G~li~p-------~d~e~la~aI~~~l~~l~~dp~-~~~~ms~~a 746 (806)
++++||+++|+|+|+- +..-.+..+ +.-+.|+.+.. -+.++++++|.+++ .+++ ..+++.+++
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm----~~~~~~~~~~r~~a 443 (480)
T PLN00164 368 NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM----GGGEEEGRKAREKA 443 (480)
T ss_pred chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHH
Confidence 4899999999999996 444455444 33457877642 14678888886655 5543 244444444
Q ss_pred H
Q 003636 747 L 747 (806)
Q Consensus 747 r 747 (806)
.
T Consensus 444 ~ 444 (480)
T PLN00164 444 A 444 (480)
T ss_pred H
Confidence 3
No 163
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=93.06 E-value=6.8 Score=41.85 Aligned_cols=112 Identities=10% Similarity=0.043 Sum_probs=66.2
Q ss_pred CCCCCEEEEEecCCcCCCH-----HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCc
Q 003636 569 DRSKPIVFSMARLDHVKNM-----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQ 642 (806)
Q Consensus 569 ~~~k~iI~~vGRL~~~Kgi-----~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~-~~l~~~ 642 (806)
.+...+-+.+|.-.+.-.. ..++.++.+..+. ....+++--+-.. -+..+.+++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 3566778888876654333 2223333332221 2466777666554 2346666665 444455
Q ss_pred EEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCc
Q 003636 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (806)
Q Consensus 643 V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~ 700 (806)
+.|-+.-++.- -...+++ +||.++.+...-. -.-||.+.|+||++-...+.
T Consensus 226 i~w~~~d~g~N---PY~~~La-~Adyii~TaDSin---M~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTGYN---PYIDMLA-AADYIISTADSIN---MCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCCCC---chHHHHh-hcceEEEecchhh---hhHHHhccCCCeEEEecCCc
Confidence 77776433322 3556677 5999998865222 35799999999998755443
No 164
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=92.67 E-value=17 Score=39.23 Aligned_cols=134 Identities=13% Similarity=0.051 Sum_probs=78.5
Q ss_pred EEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH--------------c--CC
Q 003636 576 FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT--------------Y--KL 639 (806)
Q Consensus 576 ~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~--------------~--~l 639 (806)
.|+||..-.||+..+++.-++..+. +...-++-|-...+ +. -...+. . .-
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~------------A~-~~i~d~~~~~~y~~~~~~~~~~~~p 252 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP------------AK-ISIKDHGIPYEYYPKLDCDEPKPAP 252 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST------------HH-HHHHHTT--EEEE-CTGGGG---SS
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC------------ce-eeeecCCcccccCccccccCcccCC
Confidence 7999999999999999998886554 67777777754331 11 111111 1 11
Q ss_pred CCcEEEcccccCcCChHHHHHHHHccCcEEEECCC------CCCCcHHHHHHHHcCC-CEEEcCCcCccc-------ccc
Q 003636 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGL-PTFATCHGGPAE-------IIE 705 (806)
Q Consensus 640 ~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~------~E~fGltvlEAMa~Gl-PVVAt~~GG~~E-------iI~ 705 (806)
.+.+..+| +.-++|....++. +...++-+. .+..--+-+|..|||. ||+-+..|.... .+.
T Consensus 253 N~~~~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~ 327 (355)
T PF11440_consen 253 NSPVPVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYID 327 (355)
T ss_dssp S--EEEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGS
T ss_pred CCcceecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeec
Confidence 23467777 6678899999996 666665442 3456778999999997 666666665544 233
Q ss_pred cCCcEEEECCCCHHHHHHHHHHH
Q 003636 706 HGASGFHIDPYHPDQAAELMADF 728 (806)
Q Consensus 706 dg~~G~li~p~d~e~la~aI~~~ 728 (806)
+.-+.+.++.+|.++..++|.++
T Consensus 328 ~~~~~I~~De~dle~T~ekl~E~ 350 (355)
T PF11440_consen 328 HPYSAIYFDENDLESTVEKLIEV 350 (355)
T ss_dssp S--S-EEE-TTSHHHHHHHHHHH
T ss_pred cCcceeEeccchHHHHHHHHHHH
Confidence 34467789999999999988664
No 165
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=90.46 E-value=0.17 Score=49.95 Aligned_cols=91 Identities=16% Similarity=0.259 Sum_probs=56.4
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcC--------cccccccCCcEEE
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFH 712 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG--------~~EiI~dg~~G~l 712 (806)
.+|.+.++.. ++..+++ .||+.|.- +-+.|+.|++++|+|.|.-...+ ....+.....|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~-~aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMA-AADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHH-HHSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHH-HcCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6788888432 4778888 49998874 23579999999999998865555 2223333334554
Q ss_pred ECCC--CHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003636 713 IDPY--HPDQAAELMADFFGKCKENPSHWKKISDGG 746 (806)
Q Consensus 713 i~p~--d~e~la~aI~~~l~~l~~dp~~~~~ms~~a 746 (806)
+... +++.+.++| ..+..++....++++++
T Consensus 124 ~~~~~~~~~~L~~~i----~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAI----EELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHH----HCHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHH----HHHHcCcHHHHHHHHHH
Confidence 4322 356677777 55668888777776654
No 166
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=90.05 E-value=0.79 Score=53.53 Aligned_cols=131 Identities=15% Similarity=0.154 Sum_probs=74.1
Q ss_pred CCCCEEEEEecCCcCCC----HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003636 570 RSKPIVFSMARLDHVKN----MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (806)
Q Consensus 570 ~~k~iI~~vGRL~~~Kg----i~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~f 645 (806)
++..+++++|.+.. .. ...++++++++ |+ ++++.-++.. .. .+++++..
T Consensus 275 ~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~------------~~---------~l~~n~~~ 327 (500)
T PF00201_consen 275 KKGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP------------PE---------NLPKNVLI 327 (500)
T ss_dssp TTEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSH------------GC---------HHHTTEEE
T ss_pred CCCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-cccccccccc------------cc---------cccceEEE
Confidence 34567888998763 22 33455555544 44 6776655532 00 12356777
Q ss_pred cccccCcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC----CcCcccccccCCcEEEECCC--CH
Q 003636 646 IAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHIDPY--HP 718 (806)
Q Consensus 646 lG~~~~~~~~~el~~~la~-aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~----~GG~~EiI~dg~~G~li~p~--d~ 718 (806)
.. .+|..++. ++ ..++||.= +--.++.||+.+|+|+|+-. ....+..+++.+.|..++.. +.
T Consensus 328 ~~----W~PQ~~lL---~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~ 396 (500)
T PF00201_consen 328 VK----WLPQNDLL---AHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTE 396 (500)
T ss_dssp ES----S--HHHHH---TSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SH
T ss_pred ec----cccchhhh---hcccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcH
Confidence 66 55655554 32 23556632 32458999999999999973 33455566666688888755 45
Q ss_pred HHHHHHHHHHHHhhcCCHHHHHHH
Q 003636 719 DQAAELMADFFGKCKENPSHWKKI 742 (806)
Q Consensus 719 e~la~aI~~~l~~l~~dp~~~~~m 742 (806)
+++.++|.+++ +|+++++..
T Consensus 397 ~~l~~ai~~vl----~~~~y~~~a 416 (500)
T PF00201_consen 397 EELRAAIREVL----ENPSYKENA 416 (500)
T ss_dssp HHHHHHHHHHH----HSHHHHHHH
T ss_pred HHHHHHHHHHH----hhhHHHHHH
Confidence 77777776554 788766543
No 167
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=89.88 E-value=18 Score=38.66 Aligned_cols=122 Identities=15% Similarity=0.140 Sum_probs=69.8
Q ss_pred CCCCCEEEEEecCCcC-------CCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003636 569 DRSKPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (806)
Q Consensus 569 ~~~k~iI~~vGRL~~~-------Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~-~l~ 640 (806)
..+++.|++....... .+...+.+.+..+.+..|+++++|== .|......+. ....+. +..
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~~----------~~~~~~~~~~ 182 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNKY----------SYLEELPNLP 182 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCCh----------hHhhhhhcCC
Confidence 5678889998887764 23455666776666666788876544 3321111110 222222 333
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHH
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~ 720 (806)
++.++. +...++.++.. +|.++.-+ +.+-+||+.+|+||++....-. ...|+..+..+.+.
T Consensus 183 -~~~~~~------~~~~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~G~~~Y------~~~glt~~~~~~~~ 243 (269)
T PF05159_consen 183 -NVVIID------DDVNLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVFGRAFY------AGWGLTDDRKLDEF 243 (269)
T ss_pred -CeEEEC------CCCCHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEecCccc------CCCCccCcCCchhh
Confidence 344443 23356677775 66655432 5688999999999999643322 12456555444333
No 168
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.22 E-value=2.7 Score=45.05 Aligned_cols=99 Identities=16% Similarity=0.112 Sum_probs=63.8
Q ss_pred EEEEEecCCcCC--CHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003636 574 IVFSMARLDHVK--NMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (806)
Q Consensus 574 iI~~vGRL~~~K--gi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~ 651 (806)
+++..|.-...| ..+...+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 344444444444 445777777777664 788999987644 333444444443233345566
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC
Q 003636 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (806)
Q Consensus 652 ~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~ 696 (806)
..+..|+..+++. +|++|.+. + | .+--|.+.|+|+|+--
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~D---s-g-~~HlA~a~~~p~i~l~ 224 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTND---S-G-PMHLAAALGTPTVALF 224 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeC---C-H-HHHHHHHcCCCEEEEE
Confidence 5578899999995 99999883 2 3 3444569999999863
No 169
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=88.84 E-value=55 Score=38.47 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=48.6
Q ss_pred cEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC----CcCccccc-ccCCcEEEECC-
Q 003636 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHIDP- 715 (806)
Q Consensus 642 ~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~----~GG~~EiI-~dg~~G~li~p- 715 (806)
.+.+.+ .++..++...- +.+.||.- +--++++||+.+|+|+|+-. ....+..+ +.-+.|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~--~vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQ--AVGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCc--ccCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 466666 45555555521 12235532 22458999999999999973 33445555 35557877753
Q ss_pred ---CCHHHHHHHHHHHH
Q 003636 716 ---YHPDQAAELMADFF 729 (806)
Q Consensus 716 ---~d~e~la~aI~~~l 729 (806)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 36778888887765
No 170
>PLN02764 glycosyltransferase family protein
Probab=88.78 E-value=54 Score=38.25 Aligned_cols=86 Identities=5% Similarity=0.012 Sum_probs=51.7
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCC----cCccccccc-CCcEEEECC-----CCHHHH
Q 003636 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH-GASGFHIDP-----YHPDQA 721 (806)
Q Consensus 652 ~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~----GG~~EiI~d-g~~G~li~p-----~d~e~l 721 (806)
.++..++... . +.++||.- +--++++||+.+|+|+|+-.. ...+..+.+ -+.|+.+.+ -+.+++
T Consensus 324 W~PQ~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 324 WVQQPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred CCCHHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 5566666652 1 24557743 224689999999999999743 334555543 356766532 267788
Q ss_pred HHHHHHHHHhhcCCH-HHHHHHHHHHH
Q 003636 722 AELMADFFGKCKENP-SHWKKISDGGL 747 (806)
Q Consensus 722 a~aI~~~l~~l~~dp-~~~~~ms~~ar 747 (806)
++++.+++ .++ +..+++.++++
T Consensus 398 ~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 398 RDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred HHHHHHHh----cCCchhHHHHHHHHH
Confidence 88887665 453 33444444443
No 171
>PLN03004 UDP-glycosyltransferase
Probab=87.59 E-value=7.8 Score=45.06 Aligned_cols=145 Identities=11% Similarity=0.059 Sum_probs=78.9
Q ss_pred CCCCEEEEEecCCc--CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCc--chHHHHHHHHHHHHHHHcCCCCcEEE
Q 003636 570 RSKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK--DREEIAEIEKMHELMKTYKLDGQFRW 645 (806)
Q Consensus 570 ~~k~iI~~vGRL~~--~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~--d~ee~~~~~~l~~li~~~~l~~~V~f 645 (806)
++..+.+++|.+.. .+.+..|..++.... . +|+++=..+...+.. +.+. ..-+.+.+ +.+ ..++..
T Consensus 269 ~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~-~lp~gf~e---r~~-~~g~~v 338 (451)
T PLN03004 269 EKSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKS-LLPEGFLS---RTE-DKGMVV 338 (451)
T ss_pred CCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhh-hCChHHHH---hcc-CCcEEE
Confidence 45677888888743 345555666665542 2 455554432100000 0000 00011222 222 235666
Q ss_pred cccccCcCChHHHHHHHHccCcE--EEECCCCCCCcHHHHHHHHcCCCEEEc----CCcCccccccc-CCcEEEECC---
Q 003636 646 IAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP--- 715 (806)
Q Consensus 646 lG~~~~~~~~~el~~~la~aaDi--fV~PS~~E~fGltvlEAMa~GlPVVAt----~~GG~~EiI~d-g~~G~li~p--- 715 (806)
.+ .++..++.. ..++ ||.= +--++++||+++|+|+|+- +....+..+.+ -+.|..++.
T Consensus 339 ~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~ 406 (451)
T PLN03004 339 KS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESET 406 (451)
T ss_pred Ee----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcC
Confidence 66 445555554 3666 5531 2235899999999999997 44455656654 367887753
Q ss_pred --CCHHHHHHHHHHHHHhhcCCHHHHH
Q 003636 716 --YHPDQAAELMADFFGKCKENPSHWK 740 (806)
Q Consensus 716 --~d~e~la~aI~~~l~~l~~dp~~~~ 740 (806)
-+.++++++|.+++ .|+++++
T Consensus 407 ~~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 407 GFVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred CccCHHHHHHHHHHHh----cCHHHHH
Confidence 26788888887665 5655443
No 172
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=87.19 E-value=59 Score=36.94 Aligned_cols=99 Identities=14% Similarity=0.208 Sum_probs=59.1
Q ss_pred HHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcC-ccccccc-C
Q 003636 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-PAEIIEH-G 707 (806)
Q Consensus 630 l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG-~~EiI~d-g 707 (806)
...++....-..++.+.- +. ..+++-..++. +|++|-.-+ -+++=||+.|+|+|+-..-. ...+.++ |
T Consensus 255 a~~ia~~~~~~~~i~~~~---d~-~~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~g 324 (385)
T COG2327 255 ADAIAQLVLDSAEILVSS---DE-YAEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLG 324 (385)
T ss_pred HHHHHhhcCCccceEeec---ch-HHHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcC
Confidence 333344333336677764 11 13566668884 888885433 36889999999999974332 2222222 3
Q ss_pred CcEEE--ECCCCHHHHHHHHHHHHHhhcCCHHHHHH
Q 003636 708 ASGFH--IDPYHPDQAAELMADFFGKCKENPSHWKK 741 (806)
Q Consensus 708 ~~G~l--i~p~d~e~la~aI~~~l~~l~~dp~~~~~ 741 (806)
-.|+. +.|.|.+.+.....+++. .+++.+++
T Consensus 325 l~~~~~~i~~~~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 325 LPGFAIDIDPLDAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred CCcccccCCCCchHHHHHHHHHHHh---ccHHHHhh
Confidence 34444 456778888888876653 56665554
No 173
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=85.06 E-value=8 Score=43.15 Aligned_cols=103 Identities=11% Similarity=0.066 Sum_probs=65.6
Q ss_pred CCCEEEEEecCCcCCCH--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 003636 571 SKPIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (806)
Q Consensus 571 ~k~iI~~vGRL~~~Kgi--~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~ 648 (806)
++.+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ + +.+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e-------~---e~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK-------D---DLACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh-------H---HHHHHHHHHHhcCCCccccccC-
Confidence 45566777765566653 466677666654 3678888876533 1 1222333443332223355667
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 649 ~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
..+-.++..+++. +|+||... + -.+-=|-|.|+|+|+-
T Consensus 250 ---~~sL~el~ali~~-a~l~v~nD---S--Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGVD---S--APAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEecC---C--HHHHHHHHcCCCEEEE
Confidence 6788999999995 99999873 2 2355577899999986
No 174
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=84.06 E-value=8.2 Score=40.35 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=61.2
Q ss_pred CCCCEEEEEecCCcCCCHHH--HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003636 570 RSKPIVFSMARLDHVKNMTG--LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (806)
Q Consensus 570 ~~k~iI~~vGRL~~~Kgi~~--Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG 647 (806)
+++.+++..|.-.+.|.... ..+.+.++.+.+ .+++++|+..+ .+.+...++.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 44556777777667776544 778888877654 78888887643 01222233333221 12578887
Q ss_pred cccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 648 ~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
..+..++..+++. +|++|.+ ++ -.+-=|.|.|+|+|+-
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~---Dt--g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGN---DT--GPMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEE---SS--HHHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEec---CC--hHHHHHHHHhCCEEEE
Confidence 6678999999995 9999987 33 3456688999999996
No 175
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=84.05 E-value=54 Score=35.50 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccC
Q 003636 587 MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK 666 (806)
Q Consensus 587 i~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aa 666 (806)
+..+.+++..+.+.. +.+++++..... .| .+..+++.+.+.-...| +. ..+..|+...++. +
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 456777777765442 455655554321 11 22334444444323333 22 4467899999995 9
Q ss_pred cEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 667 GAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 667 DifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
|++|-..+ -..+=|+++|+|+++-
T Consensus 252 ~~vI~~Rl-----H~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRL-----HALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEech-----HHHHHHHHcCCCEEEe
Confidence 98886544 3578899999999975
No 176
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=83.41 E-value=11 Score=41.59 Aligned_cols=100 Identities=16% Similarity=0.055 Sum_probs=62.7
Q ss_pred CCCE-EEEEec-CCcCCCHH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003636 571 SKPI-VFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (806)
Q Consensus 571 ~k~i-I~~vGR-L~~~Kgi~--~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~fl 646 (806)
++++ ++..|. ..+.|... ...+.+..+.+. +.++++.|+..+ .+...++.+..+ ...+.+.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l~ 237 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKD------------HPAGNEIEALLP-GELRNLA 237 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhh------------HHHHHHHHHhCC-cccccCC
Confidence 3444 455554 34556544 667777666542 578899987644 222333333322 1223356
Q ss_pred ccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 647 G~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
| ..+-.++..+++. +|++|... + -.+==|.|.|+|+|+-
T Consensus 238 g----~~sL~el~ali~~-a~l~I~~D---S--Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 G----ETSLDEAVDLIAL-AKAVVTND---S--GLMHVAAALNRPLVAL 276 (334)
T ss_pred C----CCCHHHHHHHHHh-CCEEEeeC---C--HHHHHHHHcCCCEEEE
Confidence 6 6688999999995 99999873 2 2355678999999985
No 177
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=82.84 E-value=4.7 Score=40.23 Aligned_cols=81 Identities=12% Similarity=0.089 Sum_probs=45.1
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCH
Q 003636 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (806)
Q Consensus 405 ~~kPDlIh~h~~~~-~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 483 (806)
...+|+|.+.+-.. ..+..+.-...++|.++-+|.... .||.+...-++.. |. .......-.||.|+++|.
T Consensus 57 ~~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~~--~~-----~~ni~saLaAD~v~FNS~ 128 (168)
T PF12038_consen 57 SHSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDFQ--YG-----MNNIYSALAADRVVFNSA 128 (168)
T ss_pred ccCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCcccccc--HH-----HHHHHHHHhceeeeecch
Confidence 34679999876432 222222223357999999998643 3443332222221 11 123345668999999998
Q ss_pred HHHhhccccc
Q 003636 484 QEIAGTKNTV 493 (806)
Q Consensus 484 ~~~~~~k~~v 493 (806)
..++..-+.+
T Consensus 129 ~nr~sFL~~~ 138 (168)
T PF12038_consen 129 FNRDSFLDGI 138 (168)
T ss_pred hhHHHHHHHH
Confidence 7665333333
No 178
>PLN03015 UDP-glucosyl transferase
Probab=82.83 E-value=1.1e+02 Score=36.06 Aligned_cols=72 Identities=19% Similarity=0.169 Sum_probs=41.4
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCC----cCccccc-ccCCcEEEEC------CCCHHH
Q 003636 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEII-EHGASGFHID------PYHPDQ 720 (806)
Q Consensus 652 ~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~----GG~~EiI-~dg~~G~li~------p~d~e~ 720 (806)
.++..++... . +.+.||.- +--++++||+++|+|+|+-.. .-.+..+ +.-+.|.-+. .-..++
T Consensus 342 W~PQ~~vL~h-~-~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSH-R-SIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhcc-C-ccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 4455555542 1 23445532 223589999999999999733 2333434 3335566553 125667
Q ss_pred HHHHHHHHH
Q 003636 721 AAELMADFF 729 (806)
Q Consensus 721 la~aI~~~l 729 (806)
++++|.+++
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 777776665
No 179
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=82.54 E-value=19 Score=41.89 Aligned_cols=140 Identities=16% Similarity=0.215 Sum_probs=71.9
Q ss_pred CCCEEEEEecCCc--CCCHHHHHHHHHHhhccCCCeEEEE-EeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003636 571 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (806)
Q Consensus 571 ~k~iI~~vGRL~~--~Kgi~~Llea~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG 647 (806)
+..+.+++|.+.. .+.+..+..++..+.. +|++ +.+......+.+.+............++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~-----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGKR-----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcCC-----CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 4667888887753 4556666677766532 3444 4431110000000000000001122222 235555556
Q ss_pred cccCcCChHHHHHHHHccCc--EEEECCCCCCCcHHHHHHHHcCCCEEEc----CCcCcccccccC-CcEEEEC-----C
Q 003636 648 AQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID-----P 715 (806)
Q Consensus 648 ~~~~~~~~~el~~~la~aaD--ifV~PS~~E~fGltvlEAMa~GlPVVAt----~~GG~~EiI~dg-~~G~li~-----p 715 (806)
.++..++.. + .. +||.- +-.++++||+.+|+|+|+- +....+..+.+. +.|+-+. .
T Consensus 334 ----W~PQ~~iL~---h-~~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 401 (455)
T PLN02152 334 ----WCSQIEVLR---H-RAVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGL 401 (455)
T ss_pred ----eCCHHHHhC---C-cccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCc
Confidence 455555544 2 44 45532 2245899999999999996 333444455442 2455542 1
Q ss_pred CCHHHHHHHHHHHH
Q 003636 716 YHPDQAAELMADFF 729 (806)
Q Consensus 716 ~d~e~la~aI~~~l 729 (806)
-+.+++++++.+++
T Consensus 402 ~~~e~l~~av~~vm 415 (455)
T PLN02152 402 VERGEIRRCLEAVM 415 (455)
T ss_pred CcHHHHHHHHHHHH
Confidence 25788888887766
No 180
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=82.12 E-value=3.1 Score=44.98 Aligned_cols=80 Identities=14% Similarity=0.094 Sum_probs=49.2
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCC--CChhhHh---hhhhhhhchhhhhHHHHHhhhCCEEE
Q 003636 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYP--DSDIYWK---KFDEKYHFSCQFTADLIAMNNADFII 479 (806)
Q Consensus 406 ~kPDlIh~h~~~-~~lva~lla~~lgvp~v~t~H~l~~~k~~--~s~~~~~---~l~~~y~~~~~~~~e~~a~~~AD~II 479 (806)
.+.||.|+.... ++++|++++.+.|+|+++|=|+....... -....|- ...+.......-..-+.++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 466999987765 58999999999999999999997321110 0001111 00011111111123467899999999
Q ss_pred ecCHHH
Q 003636 480 TSTYQE 485 (806)
Q Consensus 480 t~S~~~ 485 (806)
+.+...
T Consensus 251 ~l~~~n 256 (268)
T PF11997_consen 251 PLYEYN 256 (268)
T ss_pred ccchhh
Confidence 988754
No 181
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=81.55 E-value=6.1 Score=46.06 Aligned_cols=102 Identities=11% Similarity=-0.044 Sum_probs=65.8
Q ss_pred HHHHhhhCCEEEecCHHHHhhcccccccccccccccccccceeeccCCCCCCcEEEecCCCCCCCCCCCchHHHHHHhhh
Q 003636 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (806)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qy~~~~~f~~p~l~~~~~Gi~v~~~k~~VIpnGVD~~~f~p~~~~~~rl~~~~ 547 (806)
+......+|.+++.|+..+...+.+ ...++ ..++.+.++++|.+.+.+.......
T Consensus 203 e~e~~~~~~~~~~ns~~~~~~f~~~------------------~~~L~--~~d~~~~y~ei~~s~~~~~~~~~~~----- 257 (495)
T KOG0853|consen 203 EEETTGLAWKILVNSYFTKRQFKAT------------------FVSLS--NSDITSTYPEIDGSWFTYGQYESHL----- 257 (495)
T ss_pred hhhhhhccceEecchhhhhhhhhhh------------------hhhcC--CCCcceeeccccchhccccccccch-----
Confidence 4446778999999998765522221 11233 4458899999999887752111110
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCC
Q 003636 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL 603 (806)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~ 603 (806)
.-....+...|. ...+..+..+.|+.+.||++.+++++.++...-++
T Consensus 258 -------~~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~ 304 (495)
T KOG0853|consen 258 -------ELRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPE 304 (495)
T ss_pred -------hcccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccCC
Confidence 011122233454 44577899999999999999999999988765443
No 182
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=81.24 E-value=35 Score=37.19 Aligned_cols=99 Identities=14% Similarity=-0.005 Sum_probs=64.1
Q ss_pred CCCEEEEEecCCcCCCH--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 003636 571 SKPIVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (806)
Q Consensus 571 ~k~iI~~vGRL~~~Kgi--~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~ 648 (806)
++.+++..|.=...|.. +...+.+..+.+. +.+++++|+++. +.+...++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~---~~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP---GAVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC---CCeecC-
Confidence 44566677754556655 4666777666542 678888876654 1233344444332 235666
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 649 ~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
..+-.++..+++. ||++|.+. +- .+==|-|.|+|+|+-
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~D---Sg--p~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGVD---TG--LTHLAAALDKPTVTL 279 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeCC---Ch--HHHHHHHcCCCEEEE
Confidence 6788999999995 99999873 32 345577889999985
No 183
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=79.77 E-value=19 Score=39.96 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=63.7
Q ss_pred CCEEEEEecCCcCCC--HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 003636 572 KPIVFSMARLDHVKN--MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (806)
Q Consensus 572 k~iI~~vGRL~~~Kg--i~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~ 649 (806)
+.+++..|.-.+.|. .+...+.+..+.+ .+..++++|+..+ . +.+...++.+..+-...+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~-------~---e~~~~~~i~~~~~~~~~~~l~g-- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK-------D---ELAMVNEIAQGCQTPRVTSLAG-- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH-------H---HHHHHHHHHhhCCCCcccccCC--
Confidence 345566665445554 4556666666654 2578899986532 1 1222333333333222344666
Q ss_pred cCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 650 ~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
..+-.++..+++. +|++|... + ..+-=|.|.|+|+|+=
T Consensus 248 --~~sL~el~ali~~-a~l~Vs~D---S--Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 --KLTLPQLAALIDH-ARLFIGVD---S--VPMHMAAALGTPLVAL 285 (344)
T ss_pred --CCCHHHHHHHHHh-CCEEEecC---C--HHHHHHHHcCCCEEEE
Confidence 6788999999995 99999873 3 3456688999999985
No 184
>PLN02167 UDP-glycosyltransferase family protein
Probab=77.35 E-value=53 Score=38.46 Aligned_cols=79 Identities=16% Similarity=0.142 Sum_probs=47.6
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC----CcCccc-ccccCCcEEEECC
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAE-IIEHGASGFHIDP 715 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~----~GG~~E-iI~dg~~G~li~p 715 (806)
++....+ .++..++...= +.+.||.= -|+ ++++||+++|+|+|+-. ..-.+. +++.-+.|+.+..
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3445556 55555655421 24566643 222 48999999999999863 333333 3444456876642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 003636 716 ---------YHPDQAAELMADFF 729 (806)
Q Consensus 716 ---------~d~e~la~aI~~~l 729 (806)
-+.++++++|.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 25678888887665
No 185
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=77.22 E-value=8.8 Score=34.60 Aligned_cols=84 Identities=13% Similarity=0.168 Sum_probs=56.7
Q ss_pred EEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHH--HHHHHHccCcEEEECCCCCCCcH---
Q 003636 606 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE--LYRYIADTKGAFVQPAFYEAFGL--- 680 (806)
Q Consensus 606 LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~e--l~~~la~aaDifV~PS~~E~fGl--- 680 (806)
++|||+-.+ ....+++.++++|.. +.+.|... .....+ +...+.+ +|++|++.-+=+...
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G~~--~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYGGK--LIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcCCE--EEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 578888333 256788889998864 44444332 233334 8888885 999999876554443
Q ss_pred HHHHHHHcCCCEEEcCCcCccccc
Q 003636 681 TVVEAMTCGLPTFATCHGGPAEII 704 (806)
Q Consensus 681 tvlEAMa~GlPVVAt~~GG~~EiI 704 (806)
+--+|-..|+|++.++..|...+.
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHH
Confidence 346778889999999877765543
No 186
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=76.99 E-value=29 Score=41.34 Aligned_cols=191 Identities=12% Similarity=0.081 Sum_probs=116.8
Q ss_pred cccccCCCCCCCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003636 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (806)
Q Consensus 560 ~~~~~g~l~~~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l 639 (806)
.|..+|+ +++..++...-.|-+. -...++.+.++.+.-|+..|++.--..- ..+.++..+++.|+
T Consensus 749 ~r~~y~L--p~d~vvf~~FNqLyKi--dP~~l~~W~~ILk~VPnS~LwllrfPa~-----------ge~rf~ty~~~~Gl 813 (966)
T KOG4626|consen 749 TRSQYGL--PEDAVVFCNFNQLYKI--DPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEQRFRTYAEQLGL 813 (966)
T ss_pred CCCCCCC--CCCeEEEeechhhhcC--CHHHHHHHHHHHHhCCcceeEEEecccc-----------chHHHHHHHHHhCC
Confidence 3455777 5566666555555432 2455566666666668877777654332 13578889999998
Q ss_pred -CCcEEEcccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCccccc-----ccCCcEEEE
Q 003636 640 -DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII-----EHGASGFHI 713 (806)
Q Consensus 640 -~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI-----~dg~~G~li 713 (806)
+++|.|.. ....+|=.+-.. -+||.+-+.++-|. .|-.|.+.+|+|+|.-...-.+.-| ..-+.|-++
T Consensus 814 ~p~riifs~----va~k~eHvrr~~-LaDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli 887 (966)
T KOG4626|consen 814 EPDRIIFSP----VAAKEEHVRRGQ-LADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI 887 (966)
T ss_pred Cccceeecc----ccchHHHHHhhh-hhhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH
Confidence 47888886 333445455455 37888877665542 3567889999999875322222111 111233344
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHhchhhhhcH
Q 003636 714 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY--ERYTWKIYSERLMTLAGVYGFWKYVSK 778 (806)
Q Consensus 714 ~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~--~~ysw~~~a~~ll~ly~~~~~~~~~~~ 778 (806)
..+-++..+.-.+ |..|.+..+++...-+..-. --|+-..++..++.+|. .-|+..-+
T Consensus 888 -ak~~eEY~~iaV~----Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~--~MW~~y~~ 947 (966)
T KOG4626|consen 888 -AKNREEYVQIAVR----LATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYL--QMWKKYCS 947 (966)
T ss_pred -hhhHHHHHHHHHH----hhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHH--HHHHHhcc
Confidence 3466666665543 45788888877665544322 23888999999999886 35765443
No 187
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=76.22 E-value=19 Score=39.94 Aligned_cols=98 Identities=19% Similarity=0.143 Sum_probs=68.3
Q ss_pred CCEEEEEe-cCCcCCCHH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 003636 572 KPIVFSMA-RLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (806)
Q Consensus 572 k~iI~~vG-RL~~~Kgi~--~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~ 648 (806)
+.+++..| .-...|+.. ...+.+..+.+.. .++++.|+..+ .+...++.+.++ +.+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e------------~e~~~~i~~~~~--~~~~l~~- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDE------------EERAEEIAKGLP--NAVILAG- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHH------------HHHHHHHHHhcC--CccccCC-
Confidence 45667777 554666654 6677777777654 88999998733 444555565553 2233666
Q ss_pred ccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 649 ~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
..+-.++..+++. ||++|.+. + | .+-=|-|.|+|+|+-
T Consensus 239 ---k~sL~e~~~li~~-a~l~I~~D---S-g-~~HlAaA~~~P~I~i 276 (334)
T COG0859 239 ---KTSLEELAALIAG-ADLVIGND---S-G-PMHLAAALGTPTIAL 276 (334)
T ss_pred ---CCCHHHHHHHHhc-CCEEEccC---C-h-HHHHHHHcCCCEEEE
Confidence 7789999999995 99999874 2 2 345688999999996
No 188
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=72.25 E-value=29 Score=38.10 Aligned_cols=97 Identities=14% Similarity=0.035 Sum_probs=60.6
Q ss_pred CEEEEEecCCcCCC--HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003636 573 PIVFSMARLDHVKN--MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (806)
Q Consensus 573 ~iI~~vGRL~~~Kg--i~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~ 650 (806)
.+++..|.-...|. .+...+.+..+.+. +.++++.||++. +.+...++.+. ...+.+.|
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~--~~~ivl~~G~~~-----------e~~~~~~i~~~---~~~~~l~g--- 240 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAPS--GLRIKLPWGAEH-----------EEQRAKRLAEG---FPYVEVLP--- 240 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHcc---CCcceecC---
Confidence 34344454334454 33566777666542 567777654543 12223333332 23466777
Q ss_pred CcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 651 ~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
..+-.++...++. +|++|... + -.+-=|-|+|+|+|+-
T Consensus 241 -~~sL~elaali~~-a~l~I~nD---S--Gp~HlA~A~g~p~val 278 (322)
T PRK10964 241 -KLSLEQVARVLAG-AKAVVSVD---T--GLSHLTAALDRPNITL 278 (322)
T ss_pred -CCCHHHHHHHHHh-CCEEEecC---C--cHHHHHHHhCCCEEEE
Confidence 6789999999995 99999873 2 2456688999999996
No 189
>PLN02534 UDP-glycosyltransferase
Probab=71.87 E-value=2.1e+02 Score=33.74 Aligned_cols=77 Identities=10% Similarity=0.070 Sum_probs=44.4
Q ss_pred CcEEEcccccCcCChHHHHHHHHccCcE--EEECCCCCCCcHHHHHHHHcCCCEEEcCCcC----cccccc-cCCcEEEE
Q 003636 641 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIE-HGASGFHI 713 (806)
Q Consensus 641 ~~V~flG~~~~~~~~~el~~~la~aaDi--fV~PS~~E~fGltvlEAMa~GlPVVAt~~GG----~~EiI~-dg~~G~li 713 (806)
.++.+.| .++..++.. ..++ ||.- +-.++++||+.+|+|+|+-...+ .+..+. .=+.|+-+
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 3466666 445555544 3444 5542 33568999999999999974322 222232 22334332
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 003636 714 D---------------PYHPDQAAELMADFF 729 (806)
Q Consensus 714 ~---------------p~d~e~la~aI~~~l 729 (806)
. --+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025678888887765
No 190
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=70.20 E-value=42 Score=37.65 Aligned_cols=154 Identities=13% Similarity=0.184 Sum_probs=101.7
Q ss_pred CCCEEEEEecCCcCCCHHHHHHHHHHhhccCC-CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEcc
Q 003636 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWIA 647 (806)
Q Consensus 571 ~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~-~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l--~~~V~flG 647 (806)
.+.+-++=-+++-.|+-..=+-++.+.-+..| .+..+.|-.... ..+...+..++..+.+ ++...|.|
T Consensus 189 ~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~---------~ke~~~F~~f~~~ldlvr~gkasfeg 259 (364)
T PF10933_consen 189 GKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYH---------LKEHPTFVNFANSLDLVRDGKASFEG 259 (364)
T ss_pred CceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchh---------hhcCHHHHHHHHhhHHhhcCeeEEee
Confidence 44455555666667774432222222222223 355666665544 1223456666666655 57788988
Q ss_pred cccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHH
Q 003636 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (806)
Q Consensus 648 ~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~ 727 (806)
+. +++.++++-.|++|.-.+.-+.--.-+||+--|=|.|-. ...+.+ .|+..+..|..+=+++|.+
T Consensus 260 ----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHN-----S~~l~d--~GYYY~~fD~~~G~r~L~~ 325 (364)
T PF10933_consen 260 ----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHN-----SPLLKD--VGYYYPDFDAFEGARQLLR 325 (364)
T ss_pred ----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccC-----cchhcc--cCcCCCCccHHHHHHHHHH
Confidence 43 467788878899998777667777889999999999875 344433 8999999999999999988
Q ss_pred HHHhhcCCHHHHHHHHHHHHHHH
Q 003636 728 FFGKCKENPSHWKKISDGGLKRI 750 (806)
Q Consensus 728 ~l~~l~~dp~~~~~ms~~ar~~v 750 (806)
++. .+.+.++...+++++.+
T Consensus 326 A~~---~HD~~~~~Y~~ra~~~l 345 (364)
T PF10933_consen 326 AIR---EHDADLDAYRARARRLL 345 (364)
T ss_pred HHH---HccccHHHHHHHHHHHH
Confidence 764 45556666767776665
No 191
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=69.23 E-value=1.6e+02 Score=31.10 Aligned_cols=139 Identities=8% Similarity=-0.043 Sum_probs=72.0
Q ss_pred HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCc
Q 003636 588 TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 667 (806)
Q Consensus 588 ~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaD 667 (806)
....+-+..+.+ -++++.||..... .++.++++ .++|.|.-. ....++ +.. ++
T Consensus 35 ~VA~RK~~~Ll~--~gA~VtVVap~i~-------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~ 87 (223)
T PRK05562 35 KAAFIKGKTFLK--KGCYVYILSKKFS-------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KH 87 (223)
T ss_pred HHHHHHHHHHHh--CCCEEEEEcCCCC-------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-Cc
Confidence 333443444444 3577777776654 23444433 356777751 222233 333 55
Q ss_pred EEEECCCCCCCcHH-HHHHHHcCCCEEEcCCcCccccc-----ccCCcEEEE-CCCCHHHHHHHHHHHHHhhcCCHHHHH
Q 003636 668 AFVQPAFYEAFGLT-VVEAMTCGLPTFATCHGGPAEII-----EHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWK 740 (806)
Q Consensus 668 ifV~PS~~E~fGlt-vlEAMa~GlPVVAt~~GG~~EiI-----~dg~~G~li-~p~d~e~la~aI~~~l~~l~~dp~~~~ 740 (806)
+++..+--+..--. .-+|.+.|.+|.+.+.....+++ ..|.--+-+ ..+..-.++..|.+-++.++.+-+.+-
T Consensus 88 LViaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~ 167 (223)
T PRK05562 88 LIVIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFI 167 (223)
T ss_pred EEEECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 55544433333333 34666779999887665544443 333222222 223344666666666666664445555
Q ss_pred HHHHHHHHHHHHh
Q 003636 741 KISDGGLKRIYER 753 (806)
Q Consensus 741 ~ms~~ar~~v~~~ 753 (806)
++....|+.+.++
T Consensus 168 ~~l~~~R~~vk~~ 180 (223)
T PRK05562 168 EYVTKIRNKAKKN 180 (223)
T ss_pred HHHHHHHHHHHhh
Confidence 5666666666553
No 192
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=68.90 E-value=44 Score=37.11 Aligned_cols=100 Identities=16% Similarity=0.030 Sum_probs=61.1
Q ss_pred CCEEEEEecC-CcCCC--HHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC--Cc-EEE
Q 003636 572 KPIVFSMARL-DHVKN--MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--GQ-FRW 645 (806)
Q Consensus 572 k~iI~~vGRL-~~~Kg--i~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~--~~-V~f 645 (806)
+.+++..|.= .+.|. .+...+.+..+.+ .+++++++|+..+ .+...++.+..+-. .+ +.+
T Consensus 181 ~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e------------~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 181 PIIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred CEEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh------------HHHHHHHHHhcccccccceeec
Confidence 3445566542 34554 3455666666543 3678888887644 22233333333211 12 455
Q ss_pred cccccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc
Q 003636 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (806)
Q Consensus 646 lG~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt 695 (806)
.| ..+-.++...++. ++++|..- + -.+==|-|.|+|+|+-
T Consensus 247 ~g----~~sL~el~ali~~-a~l~I~nD---T--Gp~HlAaA~g~P~val 286 (348)
T PRK10916 247 AG----ETQLEQAVILIAA-CKAIVTND---S--GLMHVAAALNRPLVAL 286 (348)
T ss_pred cC----CCCHHHHHHHHHh-CCEEEecC---C--hHHHHHHHhCCCEEEE
Confidence 56 6678999999995 99999873 2 2355688999999985
No 193
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=68.57 E-value=89 Score=33.69 Aligned_cols=151 Identities=17% Similarity=0.141 Sum_probs=84.0
Q ss_pred CCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003636 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (806)
Q Consensus 572 k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~ 651 (806)
.+.++.++.=.+.|+++.|+++.++.+. .+.+-..|.|.. . .--+..+.++.|+. +.++.+..
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~-------~----hl~~~~l~~~~G~~--~~~Vpy~G- 140 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS-------D----HLAAALLAKAAGIK--FTHVPYDG- 140 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH-------H----HHHHHHHHHHHT-----EEEE-SS-
T ss_pred cceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch-------H----HHHHHHHHHHhCCc--eEEEEeCC-
Confidence 3566777776789999999999987643 244443333321 0 11234456677764 44554322
Q ss_pred cCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCC-EEEc----CCc-----------CcccccccCCcEEEECC
Q 003636 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP-TFAT----CHG-----------GPAEIIEHGASGFHIDP 715 (806)
Q Consensus 652 ~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlP-VVAt----~~G-----------G~~EiI~dg~~G~li~p 715 (806)
..+.+..++....|+.+.. .-........|.- +++. +.. |..++....-.|+.+++
T Consensus 141 --~~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~ 212 (274)
T PF03401_consen 141 --GAEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPK 212 (274)
T ss_dssp --HHHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEET
T ss_pred --ccHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCC
Confidence 2455666666666776643 1223333334431 1221 111 12233333446889999
Q ss_pred CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 003636 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (806)
Q Consensus 716 ~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar 747 (806)
+-+++..+.|.+.+.+..+||+..+.+.+.+.
T Consensus 213 gtp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~ 244 (274)
T PF03401_consen 213 GTPDEIVDKLADAIKKALEDPEFQEFLEKMGL 244 (274)
T ss_dssp TS-HHHHHHHHHHHHHHHT-HHHHHHHHHHTE
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 99999999999999999999998777766554
No 194
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=65.73 E-value=25 Score=34.87 Aligned_cols=60 Identities=18% Similarity=0.224 Sum_probs=35.7
Q ss_pred CCCceEEEEcCCCchHH-HH-HHHHH-c-CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEe
Q 003636 405 QGFPDFIIGNYSDGNLV-AS-LLAYK-M-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lv-a~-lla~~-l-gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt 480 (806)
+.+||+|++.++..+.+ .. +..+. . ++|+++.+-++.... ..| .-..+|..++
T Consensus 87 ~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-----~~W------------------~~~~~D~y~V 143 (169)
T PF06925_consen 87 EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-----PFW------------------IHPGVDRYFV 143 (169)
T ss_pred hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-----cCe------------------ecCCCCEEEE
Confidence 45999999998875443 33 33333 3 477665444321100 011 2457899999
Q ss_pred cCHHHHh
Q 003636 481 STYQEIA 487 (806)
Q Consensus 481 ~S~~~~~ 487 (806)
.|+..++
T Consensus 144 ase~~~~ 150 (169)
T PF06925_consen 144 ASEEVKE 150 (169)
T ss_pred CCHHHHH
Confidence 9998766
No 195
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=65.29 E-value=56 Score=33.62 Aligned_cols=38 Identities=16% Similarity=0.265 Sum_probs=25.7
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCC
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIP 342 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~ 342 (806)
|||++....|+-.+ | +. .|.+.|++.||+|. |+++...
T Consensus 1 M~ILlTNDDGi~a~----------G----i~--------aL~~~L~~~g~~V~----VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGIDAP----------G----IR--------ALAKALSALGHDVV----VVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-TTSH----------H----HH--------HHHHHHTTTSSEEE----EEEESSS
T ss_pred CeEEEEcCCCCCCH----------H----HH--------HHHHHHHhcCCeEE----EEeCCCC
Confidence 89999999888321 1 23 56667777789999 8887643
No 196
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=65.00 E-value=18 Score=36.35 Aligned_cols=64 Identities=20% Similarity=0.127 Sum_probs=43.2
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHc------CCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEE
Q 003636 405 QGFPDFIIGNYSDGNLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFI 478 (806)
Q Consensus 405 ~~kPDlIh~h~~~~~lva~lla~~l------gvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~I 478 (806)
+.+||+|++|.+..+....++++.+ |.++|++- +....+-+ . ..-++.+.-||..
T Consensus 90 r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIE-S~aRv~~l-------------S-----lTGklly~~aD~f 150 (170)
T PF08660_consen 90 RERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIE-SFARVKTL-------------S-----LTGKLLYPFADRF 150 (170)
T ss_pred HhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEE-eeeecCCC-------------c-----hHHHHHHHhCCEE
Confidence 3489999999999988888888888 88887742 11111100 0 1123566789999
Q ss_pred EecCHHHHh
Q 003636 479 ITSTYQEIA 487 (806)
Q Consensus 479 It~S~~~~~ 487 (806)
++.-++.++
T Consensus 151 ~VQW~~l~~ 159 (170)
T PF08660_consen 151 IVQWEELAE 159 (170)
T ss_pred EEcCHHHHh
Confidence 998887654
No 197
>PLN02207 UDP-glycosyltransferase
Probab=64.81 E-value=1.1e+02 Score=35.79 Aligned_cols=135 Identities=10% Similarity=0.066 Sum_probs=70.5
Q ss_pred CCCCEEEEEecCCc--CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003636 570 RSKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (806)
Q Consensus 570 ~~k~iI~~vGRL~~--~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG 647 (806)
++..+.+++|.... .+.+..++.++..+. .+++++=..+... ..+ . .-+.+ .++ ..++....+
T Consensus 274 ~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~-----~~flW~~r~~~~~-~~~--~--lp~~f---~er--~~~~g~i~~ 338 (468)
T PLN02207 274 EASVVFLCFGSMGRLRGPLVKEIAHGLELCQ-----YRFLWSLRTEEVT-NDD--L--LPEGF---LDR--VSGRGMICG 338 (468)
T ss_pred CCcEEEEEeccCcCCCHHHHHHHHHHHHHCC-----CcEEEEEeCCCcc-ccc--c--CCHHH---Hhh--cCCCeEEEE
Confidence 34667888887653 334555666666542 2444443321100 000 0 00111 122 234454555
Q ss_pred cccCcCChHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC----CcCccccccc-CCcEEEEC--------
Q 003636 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHID-------- 714 (806)
Q Consensus 648 ~~~~~~~~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~----~GG~~EiI~d-g~~G~li~-------- 714 (806)
.++..++...= +.+.||.= -| -++++||+.+|+|+|+-. .-..+..+.+ -+.|+-+.
T Consensus 339 ----W~PQ~~IL~H~--~vg~FvTH---~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~ 408 (468)
T PLN02207 339 ----WSPQVEILAHK--AVGGFVSH---CG-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSD 408 (468)
T ss_pred ----eCCHHHHhccc--ccceeeec---Cc-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccC
Confidence 55556665531 23446532 12 247899999999999963 3344554433 45666331
Q ss_pred -CCCHHHHHHHHHHHH
Q 003636 715 -PYHPDQAAELMADFF 729 (806)
Q Consensus 715 -p~d~e~la~aI~~~l 729 (806)
.-+.++++++|.+++
T Consensus 409 ~~v~~e~i~~av~~vm 424 (468)
T PLN02207 409 EIVNANEIETAIRCVM 424 (468)
T ss_pred CcccHHHHHHHHHHHH
Confidence 126688888888776
No 198
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=64.27 E-value=1.5e+02 Score=33.16 Aligned_cols=125 Identities=8% Similarity=-0.048 Sum_probs=71.4
Q ss_pred CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHH----HHHHccCcEEEECC--CC
Q 003636 602 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY----RYIADTKGAFVQPA--FY 675 (806)
Q Consensus 602 ~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~----~~la~aaDifV~PS--~~ 675 (806)
.+.+++|+|.|.- -+..-+...+.|. .+|.+........+.++++ .+... +|+++..| ..
T Consensus 173 ~~k~vLvIGaGem------------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Ta 238 (338)
T PRK00676 173 KKASLLFIGYSEI------------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESA 238 (338)
T ss_pred cCCEEEEEcccHH------------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCC
Confidence 4679999999854 2233333344555 4577777554445566655 55664 89999753 23
Q ss_pred CCCcHHHHHHHHcCCCEEEcCCcCcccccc--cCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Q 003636 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (806)
Q Consensus 676 E~fGltvlEAMa~GlPVVAt~~GG~~EiI~--dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v 750 (806)
-+.+....|.+..-.+-+.-|..-|+++-. ...+-.++ |.|++.+.+.+ |-..|++....+...+
T Consensus 239 s~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~~-------n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 239 YAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQK-------HLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 344555556554322246667777777631 12233344 67777666643 4445555555555554
No 199
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=63.34 E-value=5.8 Score=37.41 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=20.2
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEecc
Q 003636 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (806)
Q Consensus 301 tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~ 340 (806)
|+|-..-.+ .|+++|+++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 356555556 67888899999998 77765
No 200
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=61.26 E-value=2e+02 Score=33.31 Aligned_cols=142 Identities=14% Similarity=0.149 Sum_probs=75.4
Q ss_pred CCCEEEEEecCCc-----CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC--CCCcE
Q 003636 571 SKPIVFSMARLDH-----VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK--LDGQF 643 (806)
Q Consensus 571 ~k~iI~~vGRL~~-----~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~--l~~~V 643 (806)
+..++++.|.... .+-...++.+++++ +++.|+++=..... .. +.+... ..++|
T Consensus 277 ~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~------------~~---~~~~~~~~~~~nV 337 (496)
T KOG1192|consen 277 HSVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS------------IY---FPEGLPNRGRGNV 337 (496)
T ss_pred CCeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc------------hh---hhhcCCCCCcCce
Confidence 3567777888763 34444556666554 46777776655430 00 222221 13568
Q ss_pred EEcccccCcCChHHHHHHHHcc-CcEEEECCCCCCCcHHHHHHHHcCCCEEEc----CCcCcccccc-cCCcEEEECCCC
Q 003636 644 RWIAAQTNRARNGELYRYIADT-KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIE-HGASGFHIDPYH 717 (806)
Q Consensus 644 ~flG~~~~~~~~~el~~~la~a-aDifV~PS~~E~fGltvlEAMa~GlPVVAt----~~GG~~EiI~-dg~~G~li~p~d 717 (806)
...+ .++..++. ++.. .++||. .-|++ +++||..+|+|+|+. +..-.+..+. +|..|... ..|
T Consensus 338 ~~~~----W~PQ~~ll--l~H~~v~~FvT---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~-~~~ 406 (496)
T KOG1192|consen 338 VLSK----WAPQNDLL--LDHPAVGGFVT---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD-KRD 406 (496)
T ss_pred EEec----CCCcHHHh--cCCCcCcEEEE---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe-hhh
Confidence 8777 44555554 2222 344552 23444 459999999999954 3334444444 44444443 332
Q ss_pred H--HHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 003636 718 P--DQAAELMADFFGKCKENPSHWKKISDGG 746 (806)
Q Consensus 718 ~--e~la~aI~~~l~~l~~dp~~~~~ms~~a 746 (806)
. ..+.+++.+++ .++++.+...+-+
T Consensus 407 ~~~~~~~~~~~~il----~~~~y~~~~~~l~ 433 (496)
T KOG1192|consen 407 LVSEELLEAIKEIL----ENEEYKEAAKRLS 433 (496)
T ss_pred cCcHHHHHHHHHHH----cChHHHHHHHHHH
Confidence 2 22566665544 6776655544433
No 201
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=55.66 E-value=66 Score=32.72 Aligned_cols=68 Identities=16% Similarity=-0.007 Sum_probs=28.0
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhHhhhhhhhhchhhhhHHHHHhhhCCEEEecCHHHH
Q 003636 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (806)
Q Consensus 407 kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l~~~k~~~s~~~~~~l~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (806)
+||+++.-......-....+++.|+|++..-=-+... +-.. |..... .-+..++..|.|.+.|+..+
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~----s~~~-------~~~~~~--~~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSER----SFRR-------YRRFPF--LFRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-------------------------H--HHHHHGGG-SEEEESSHHHH
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccc----cchh-------hhhhHH--HHHHHHHhCCEEEECCHHHH
Confidence 7999987766643333445677899977642222110 1011 111111 23456889999999999876
Q ss_pred h
Q 003636 487 A 487 (806)
Q Consensus 487 ~ 487 (806)
+
T Consensus 162 ~ 162 (186)
T PF04413_consen 162 E 162 (186)
T ss_dssp H
T ss_pred H
Confidence 6
No 202
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=53.75 E-value=36 Score=38.92 Aligned_cols=82 Identities=10% Similarity=-0.018 Sum_probs=55.7
Q ss_pred HHcCCCEEEcCC---cCcccccccCCcEEEECC-CCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003636 686 MTCGLPTFATCH---GGPAEIIEHGASGFHIDP-YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSE 761 (806)
Q Consensus 686 Ma~GlPVVAt~~---GG~~EiI~dg~~G~li~p-~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~ 761 (806)
|+||-.|+.... .-.-+.+...++=+-+.. +|..++.++| +.+.+|++..++|+++|.+.+.+..+.+.+..
T Consensus 234 L~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v----~w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~ 309 (395)
T PF05686_consen 234 LACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKV----EWLNAHDDEAQRIAENGQRFAREYLTMEDVYC 309 (395)
T ss_pred HcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHh----hhcccChHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 555555554321 112222334444455554 4677777777 55678999999999999999999888888888
Q ss_pred HHHHHHHHhc
Q 003636 762 RLMTLAGVYG 771 (806)
Q Consensus 762 ~ll~ly~~~~ 771 (806)
=+..+...|+
T Consensus 310 Y~~~LL~eYa 319 (395)
T PF05686_consen 310 YWRRLLLEYA 319 (395)
T ss_pred HHHHHHHHHH
Confidence 7777777765
No 203
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=53.07 E-value=4.2e+02 Score=30.66 Aligned_cols=124 Identities=14% Similarity=0.067 Sum_probs=73.8
Q ss_pred HHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEEEECCC--CCCCcHHH-HHHHHcCCCEEEcCCcCcccc
Q 003636 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTV-VEAMTCGLPTFATCHGGPAEI 703 (806)
Q Consensus 627 ~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDifV~PS~--~E~fGltv-lEAMa~GlPVVAt~~GG~~Ei 703 (806)
.++-.+++++++. ..++.+++..++.+ +|+++..+- .--.+... -+|+.--...+..|.+-|+++
T Consensus 212 ~erA~~La~~~~~-----------~~~~l~el~~~l~~-~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdi 279 (414)
T COG0373 212 LERAEELAKKLGA-----------EAVALEELLEALAE-ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDV 279 (414)
T ss_pred HHHHHHHHHHhCC-----------eeecHHHHHHhhhh-CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCC
Confidence 4567788988871 14456799999996 999887632 22233333 344454445688899999887
Q ss_pred cccC---CcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhchhhhhcH
Q 003636 704 IEHG---ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSK 778 (806)
Q Consensus 704 I~dg---~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~~~~~~~~~ 778 (806)
-.+- .+-+++ |.|++..... .|-..|++....+...++ .-+++++..|+....-..++.
T Consensus 280 e~~v~~l~~v~l~---~iDDL~~iv~-------~n~~~R~~~~~~ae~iIe------ee~~~~~~~l~~~~~~~~i~~ 341 (414)
T COG0373 280 EPEVGELPNVFLY---TIDDLEEIVE-------ENLEARKEEAAKAEAIIE------EELAEFMEWLKKLEVVPTIRA 341 (414)
T ss_pred CccccCcCCeEEE---ehhhHHHHHH-------HhHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhhchHHHHH
Confidence 6432 123455 5666655553 255567776666666553 344555555555554333333
No 204
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=52.99 E-value=44 Score=35.92 Aligned_cols=54 Identities=19% Similarity=0.019 Sum_probs=31.6
Q ss_pred CcEEEECCCCC--CCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHH
Q 003636 666 KGAFVQPAFYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (806)
Q Consensus 666 aDifV~PS~~E--~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~ 727 (806)
+|++|.=-.-+ ++--++--|+.+|+|||.-+-+-... + +-.+ ++.+++.+.+.+
T Consensus 198 i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~----~--~~~~--~~~~el~~~l~~ 253 (256)
T TIGR00715 198 IDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP----G--VAIF--DDISQLNQFVAR 253 (256)
T ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----C--CccC--CCHHHHHHHHHH
Confidence 55655432222 45557888899999999987664311 0 0112 467777666643
No 205
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=50.89 E-value=2.9e+02 Score=28.23 Aligned_cols=95 Identities=14% Similarity=0.084 Sum_probs=54.5
Q ss_pred CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHH
Q 003636 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIA 663 (806)
Q Consensus 584 ~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la 663 (806)
..-.+.+.+.+..+.+......++.+...... +. ...............++..+.. ..+..++...++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 256 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDD------ED---DDDFNEIDIKAEKFFNVIIIDY---SLSPDELLELIS 256 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccch------hh---HHHHHhhhhhcccccceeEecC---CCCHHHHHHHHh
Confidence 34455566677776664444555555544431 00 1111111100222333444432 557889999999
Q ss_pred ccCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC
Q 003636 664 DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (806)
Q Consensus 664 ~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~ 696 (806)
. ++++|.... -..+=|+++|+|+|+-.
T Consensus 257 ~-~~~~Is~Rl-----H~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 257 Q-ADLVISMRL-----HGAILALSLGVPVIAIS 283 (286)
T ss_pred c-CCEEEecCC-----HHHHHHHHcCCCEEEEe
Confidence 5 999997765 35788999999999864
No 206
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=49.33 E-value=54 Score=40.02 Aligned_cols=43 Identities=35% Similarity=0.571 Sum_probs=29.0
Q ss_pred CCCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEecc
Q 003636 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (806)
Q Consensus 275 ~p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~ 340 (806)
-|..+||+++|||-- ..++|- ||. ..+|.++||+|+ |+++|..
T Consensus 366 ~~~~~rvLv~spHPD---Devi~~---GGT---------------larl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 366 LPYPKRVIIFSPHPD---DDVISM---GGT---------------FRRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred ccCCceEEEEEeCCC---chHhhh---HHH---------------HHHHHHCCCcEE--EEEecCC
Confidence 456799999999942 244543 552 245789999998 4445544
No 207
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=49.02 E-value=77 Score=34.04 Aligned_cols=48 Identities=15% Similarity=0.156 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Q 003636 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYG 771 (806)
Q Consensus 720 ~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~~ 771 (806)
++.++| +.+.++++..++|+++|++.+++..+.+.+..-+..+...|+
T Consensus 203 ~l~~~i----~~~~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~~~ll~eya 250 (256)
T smart00672 203 ELKEAV----DWGNEHDKKAQEIGKRGSEFIQQNLSMEDVYDYMFHLLQEYA 250 (256)
T ss_pred hHHHHH----HHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 477777 445589999999999999999888999888888888777664
No 208
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=48.35 E-value=2.7e+02 Score=30.82 Aligned_cols=103 Identities=16% Similarity=0.103 Sum_probs=59.1
Q ss_pred HHHHHHHHCCCceeeceeEEeccC--CCCCCCccc--ccceeecCCCceEEEEecCCCcccccccccccCCchhhHHHHH
Q 003636 318 EMLLRIKRQGLDISPKILIVTRLI--PDAKGTTCN--QRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFT 393 (806)
Q Consensus 318 eLa~~L~~~G~eV~~~ilVvT~~~--~~~~g~~~~--~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~ 393 (806)
.|.+.|.++||.|- |+.-.+ |-..|.--. -+.......+|+-|-.+|.+...| . +..-.
T Consensus 70 ~L~~~l~~~G~rVa----VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG----G---------lS~at 132 (323)
T COG1703 70 ALGRELRERGHRVA----VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG----G---------LSRAT 132 (323)
T ss_pred HHHHHHHHCCcEEE----EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch----h---------hhHHH
Confidence 67778899999998 554332 222332222 234444545677777777775433 1 12223
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003636 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (806)
Q Consensus 394 ~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H~l 440 (806)
.++...+.+ ..+|+|+......+-.-.-++..-.+-++++....
T Consensus 133 ~~~i~~ldA---aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 133 REAIKLLDA---AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred HHHHHHHHh---cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 344444443 48999998877654433444455555666666654
No 209
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=47.80 E-value=3.3e+02 Score=28.04 Aligned_cols=137 Identities=12% Similarity=0.042 Sum_probs=68.6
Q ss_pred HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCcEE
Q 003636 590 LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAF 669 (806)
Q Consensus 590 Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaDif 669 (806)
-...+..+.+. ++++.|+..... +++.+++++ ++|.|... ... ...+. .++++
T Consensus 21 a~rk~~~Ll~~--ga~VtVvsp~~~-------------~~l~~l~~~----~~i~~~~~---~~~----~~dl~-~~~lV 73 (205)
T TIGR01470 21 ALRKARLLLKA--GAQLRVIAEELE-------------SELTLLAEQ----GGITWLAR---CFD----ADILE-GAFLV 73 (205)
T ss_pred HHHHHHHHHHC--CCEEEEEcCCCC-------------HHHHHHHHc----CCEEEEeC---CCC----HHHhC-CcEEE
Confidence 33444455443 567777765443 234444432 36777651 112 22344 36665
Q ss_pred EECCCC-CCCcHHHHHHHHcCCCEEEcCCcCccccc-----ccCCcEEEE-CCCCHHHHHHHHHHHHHhhcC-CHHHHHH
Q 003636 670 VQPAFY-EAFGLTVVEAMTCGLPTFATCHGGPAEII-----EHGASGFHI-DPYHPDQAAELMADFFGKCKE-NPSHWKK 741 (806)
Q Consensus 670 V~PS~~-E~fGltvlEAMa~GlPVVAt~~GG~~EiI-----~dg~~G~li-~p~d~e~la~aI~~~l~~l~~-dp~~~~~ 741 (806)
+...-. |----..-+|-..|+||-+.+.....+++ ..|.--+-+ ..+..-.++..|.+-++.++. +-+.+-+
T Consensus 74 i~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~~~ 153 (205)
T TIGR01470 74 IAATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLPPSLGDLAT 153 (205)
T ss_pred EECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHHHH
Confidence 544322 22233456777899999777655544433 344322222 223344666666666655543 2233344
Q ss_pred HHHHHHHHHHHh
Q 003636 742 ISDGGLKRIYER 753 (806)
Q Consensus 742 ms~~ar~~v~~~ 753 (806)
+....|..+.+.
T Consensus 154 ~~~~~R~~~k~~ 165 (205)
T TIGR01470 154 LAATWRDAVKKR 165 (205)
T ss_pred HHHHHHHHHHhh
Confidence 555555555444
No 210
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=43.67 E-value=23 Score=36.16 Aligned_cols=33 Identities=18% Similarity=0.426 Sum_probs=26.8
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEecc
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~ 340 (806)
|||+||+..|..| - .++++..++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~G-----------------s--------~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKAG-----------------S--------RILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchhH-----------------H--------HHHHHHHhCCCeeE----EEEeC
Confidence 7999999888743 1 67788899999999 77776
No 211
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=40.05 E-value=4.6e+02 Score=28.11 Aligned_cols=118 Identities=20% Similarity=0.184 Sum_probs=67.9
Q ss_pred CcCCCHHHHHHHHHHhhccC-CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-CcEEEcc-cccCcCCh-HH
Q 003636 582 DHVKNMTGLVECYGKNSQLR-ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD-GQFRWIA-AQTNRARN-GE 657 (806)
Q Consensus 582 ~~~Kgi~~Llea~~~l~~~~-~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~-~~V~flG-~~~~~~~~-~e 657 (806)
+-.|-+..|-+|+.-+++.- ..-.+++||.... ..+-+.+.+++.|.. =+=||+| ..+|.-+. ..
T Consensus 42 DL~kT~~~l~~A~~~v~~~~~~~g~ILfVgTK~~-----------a~~~V~~~A~r~g~~yV~~RwLgG~LTN~~ti~~s 110 (252)
T COG0052 42 DLQKTLERLREAYKFLRRIAANGGKILFVGTKKQ-----------AQEPVKEFAERTGAYYVNGRWLGGMLTNFKTIRKS 110 (252)
T ss_pred EHHHHHHHHHHHHHHHHHHHcCCCEEEEEechHH-----------HHHHHHHHHHHhCCceecCcccCccccCchhHHHH
Confidence 34566677777877766432 2567899998754 234566667766653 1337877 33332121 22
Q ss_pred HHHHH--H----c--------------------------------cCc-EEEECCCCCCCcHHHHHHHHcCCCEEEc-CC
Q 003636 658 LYRYI--A----D--------------------------------TKG-AFVQPAFYEAFGLTVVEAMTCGLPTFAT-CH 697 (806)
Q Consensus 658 l~~~l--a----~--------------------------------aaD-ifV~PS~~E~fGltvlEAMa~GlPVVAt-~~ 697 (806)
+-++. - + .-| +||.=...|. .++.||--+|.||||- |.
T Consensus 111 i~rl~~lE~~~~~~~~~~tKkE~l~l~re~~kL~k~lgGIk~m~~~Pd~l~ViDp~~e~--iAv~EA~klgIPVvAlvDT 188 (252)
T COG0052 111 IKRLKELEKMEEDGFDGLTKKEALMLTRELEKLEKSLGGIKDMKGLPDVLFVIDPRKEK--IAVKEANKLGIPVVALVDT 188 (252)
T ss_pred HHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHhhcchhhccCCCCEEEEeCCcHhH--HHHHHHHHcCCCEEEEecC
Confidence 33322 0 0 023 3444344454 6799999999999996 56
Q ss_pred cCcccccccCCcEEEECCCC
Q 003636 698 GGPAEIIEHGASGFHIDPYH 717 (806)
Q Consensus 698 GG~~EiI~dg~~G~li~p~d 717 (806)
...++.| -+.++.+|
T Consensus 189 n~dpd~V-----D~~IP~Nd 203 (252)
T COG0052 189 NCDPDGV-----DYVIPGND 203 (252)
T ss_pred CCCCccC-----ceeecCCC
Confidence 6666655 25665443
No 212
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=39.53 E-value=4.2e+02 Score=26.83 Aligned_cols=44 Identities=16% Similarity=0.391 Sum_probs=28.6
Q ss_pred CCCCcceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccC
Q 003636 274 RLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLI 341 (806)
Q Consensus 274 ~~p~~~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~ 341 (806)
+++|.|||.+- |.| .+ |-.+.++ .+++.|.+.|+.|- =++|...
T Consensus 1 ~~~~~mki~IT---G~P---------Gv-GKtTl~~--------ki~e~L~~~g~kvg---Gf~t~EV 44 (179)
T COG1618 1 MIKMAMKIFIT---GRP---------GV-GKTTLVL--------KIAEKLREKGYKVG---GFITPEV 44 (179)
T ss_pred CCCcceEEEEe---CCC---------Cc-cHHHHHH--------HHHHHHHhcCceee---eEEeeee
Confidence 36788999774 332 22 4455556 78888999999876 2445443
No 213
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=39.01 E-value=1.4e+02 Score=30.98 Aligned_cols=112 Identities=18% Similarity=0.141 Sum_probs=64.2
Q ss_pred CcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEcccccCcCChHHHHH
Q 003636 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIAAQTNRARNGELYR 660 (806)
Q Consensus 582 ~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~-~V~flG~~~~~~~~~el~~ 660 (806)
+-.|=...|..|+.-+... ..-++++||..+. ...-+.+.++..|..- .=+|+| +-..+..+..
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~-----------~~~~v~k~A~~~g~~~v~~RWlg---G~LTN~~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY-----------GQKPVQKFAEVVGAKAITGRFIP---GTLTNPSLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-----------HHHHHHHHHHHhCCeeecCccCC---CcCcCcchhc
Confidence 4445555666666555554 3467888998765 1234555666555421 116877 2223333333
Q ss_pred HHHccCcEEEECC-CCCCCcHHHHHHHHcCCCEEEc-CCcCcccccccCCcEEEECCCC
Q 003636 661 YIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 717 (806)
Q Consensus 661 ~la~aaDifV~PS-~~E~fGltvlEAMa~GlPVVAt-~~GG~~EiI~dg~~G~li~p~d 717 (806)
++- =|+.++.. ..| ..++.||..+|.||||- |.....+.| -+.++.+|
T Consensus 112 ~~~--Pdliiv~dp~~~--~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Nd 161 (204)
T PRK04020 112 YIE--PDVVVVTDPRGD--AQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNN 161 (204)
T ss_pred cCC--CCEEEEECCccc--HHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCC
Confidence 322 34444332 223 57899999999999996 566666665 35675544
No 214
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=38.84 E-value=4.2e+02 Score=26.67 Aligned_cols=109 Identities=8% Similarity=0.165 Sum_probs=64.1
Q ss_pred eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHc-cCcEEEECCCCCC----C
Q 003636 604 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEA----F 678 (806)
Q Consensus 604 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~-aaDifV~PS~~E~----f 678 (806)
.+++|+.+.+. ....+....+..+ .+..++. ..+..+....+.. ..|++++-....+ -
T Consensus 4 ~~Ilivdd~~~-----------~~~~l~~~L~~~~---~~~~v~~---~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~ 66 (216)
T PRK10840 4 MNVIIADDHPI-----------VLFGIRKSLEQIE---WVNVVGE---FEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 (216)
T ss_pred eEEEEECCcHH-----------HHHHHHHHHhcCC---CCEEEEE---ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCC
Confidence 56777776654 1234555554432 2222221 1133455555442 3688877543322 5
Q ss_pred cHHHHHHHH---cCCCEEEc-CCcCc---ccccccCCcEEEECCCCHHHHHHHHHHHH
Q 003636 679 GLTVVEAMT---CGLPTFAT-CHGGP---AEIIEHGASGFHIDPYHPDQAAELMADFF 729 (806)
Q Consensus 679 GltvlEAMa---~GlPVVAt-~~GG~---~EiI~dg~~G~li~p~d~e~la~aI~~~l 729 (806)
|+.+++.+. .++|+|+- ..... .+.+..|..||+..|.+++++.++|..+.
T Consensus 67 g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred HHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 777777764 34667664 33332 23467799999999999999999997665
No 215
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=37.80 E-value=5.3e+02 Score=27.52 Aligned_cols=36 Identities=25% Similarity=0.409 Sum_probs=22.8
Q ss_pred cCCCceEEEE--cC-C--------CchHHHHHHHHHcCCcEEEEecC
Q 003636 404 LQGFPDFIIG--NY-S--------DGNLVASLLAYKMGITQCTIAHA 439 (806)
Q Consensus 404 ~~~kPDlIh~--h~-~--------~~~lva~lla~~lgvp~v~t~H~ 439 (806)
+..+||+|++ |. . .+-..|++-+...|+|-+..-..
T Consensus 83 ~~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 83 MPEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred ccCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 3568999983 22 1 12345566677789998876653
No 216
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=37.67 E-value=5.3e+02 Score=27.80 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=22.3
Q ss_pred cCCCceEEEE--cCC---------CchHHHHHHHHHcCCcEEEEec
Q 003636 404 LQGFPDFIIG--NYS---------DGNLVASLLAYKMGITQCTIAH 438 (806)
Q Consensus 404 ~~~kPDlIh~--h~~---------~~~lva~lla~~lgvp~v~t~H 438 (806)
+..+||+|++ |.- .+-..|++-+...|+|-+..-.
T Consensus 88 ~~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 88 LPEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred cCCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 3568999983 211 1234556667778999887654
No 217
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=37.40 E-value=2.3e+02 Score=33.22 Aligned_cols=96 Identities=8% Similarity=0.095 Sum_probs=55.7
Q ss_pred HHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCC-CEEEcCC--cCcccccccCCcEEEECCCCHHHHHHHHHHHHHhh
Q 003636 656 GELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFATCH--GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKC 732 (806)
Q Consensus 656 ~el~~~la~aaDifV~PS~~E~fGltvlEAMa~Gl-PVVAt~~--GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l 732 (806)
....+.+++ +-..++|+-.+...-.++||+.+|| |||.++. ....+++.-..-++.++ .+++-+.|.+.+..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHh-
Confidence 356667775 8888899988988889999999997 7777753 33444444444555554 33333333443321
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCCHH
Q 003636 733 KENPSHWKKISDGGLKRIYERYTWK 757 (806)
Q Consensus 733 ~~dp~~~~~ms~~ar~~v~~~ysw~ 757 (806)
...+...+|.++-...+...+.|.
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~ 433 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKK 433 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeC
Confidence 122333444444443444444443
No 218
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.33 E-value=7e+02 Score=28.75 Aligned_cols=175 Identities=11% Similarity=0.098 Sum_probs=105.0
Q ss_pred EEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcc-cccCcC
Q 003636 575 VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA-AQTNRA 653 (806)
Q Consensus 575 I~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG-~~~~~~ 653 (806)
|=|.|..+..+-.....+...+.++ +++.++||-..-. ---|.+..++|.+..+..+ +++|.|.= ... -.
T Consensus 157 iP~ygsyte~dpv~ia~egv~~fKk--e~fdvIIvDTSGR-----h~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasi-GQ 227 (483)
T KOG0780|consen 157 VPFYGSYTEADPVKIASEGVDRFKK--ENFDVIIVDTSGR-----HKQEASLFEEMKQVSKAIK-PDEIIFVMDASI-GQ 227 (483)
T ss_pred CeeEecccccchHHHHHHHHHHHHh--cCCcEEEEeCCCc-----hhhhHHHHHHHHHHHhhcC-CCeEEEEEeccc-cH
Confidence 4466677888888899999999887 4688888875432 1345566778888888776 56677653 111 12
Q ss_pred ChHHHHHHHHccCcE--EEECCC----CCCCcHHHHHHHHcCCCEEEcCCcCcccccccCC----cEEEECCCCHHHHHH
Q 003636 654 RNGELYRYIADTKGA--FVQPAF----YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA----SGFHIDPYHPDQAAE 723 (806)
Q Consensus 654 ~~~el~~~la~aaDi--fV~PS~----~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~----~G~li~p~d~e~la~ 723 (806)
..++..+.+..+.|+ .+.+-. ..+..+++++ +.++||+--..|..-|-++.-. .+-+.--+|.+.+.+
T Consensus 228 aae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glve 305 (483)
T KOG0780|consen 228 AAEAQARAFKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLVE 305 (483)
T ss_pred hHHHHHHHHHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHHHHHHhccccHHHHHH
Confidence 334455555555555 334432 2334455555 4688998877776554443211 122234467777777
Q ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003636 724 LMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGV 769 (806)
Q Consensus 724 aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~ 769 (806)
++.++. ..+++++.+++. .-+||...+.+++.++.+.
T Consensus 306 k~~ev~--~~d~~el~~kl~-------~gkFtlrd~y~Qfq~imkm 342 (483)
T KOG0780|consen 306 KVQEVG--KDDAKELVEKLK-------QGKFTLRDFYDQFQNIMKM 342 (483)
T ss_pred HHHHHh--hhhHHHHHHHHH-------hCCccHHHHHHHHHHHHhh
Confidence 776654 123333333332 2468999999988887765
No 219
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=35.98 E-value=1.5e+02 Score=28.36 Aligned_cols=100 Identities=19% Similarity=0.227 Sum_probs=49.4
Q ss_pred HHHHHHHHCCCceeeceeEEeccCCCCC-CCcc-cccceeecCCCceEEEEecCCCcccccccccccCCchhhHHHHHHH
Q 003636 318 EMLLRIKRQGLDISPKILIVTRLIPDAK-GTTC-NQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTED 395 (806)
Q Consensus 318 eLa~~L~~~G~eV~~~ilVvT~~~~~~~-g~~~-~~~~e~i~g~~~v~Ilrvp~~~~~~~~~~~isr~~i~~yl~~f~~~ 395 (806)
+....|.++|..++ .|.++|...++.. +... ...+ .......+|..++.. +....--.-.+.+...
T Consensus 9 Etl~aL~~~g~~i~-ev~lI~T~~~~v~~~~~~l~~~l--~~~~~~~~i~~i~~~---------~~DI~t~~d~~~~~~~ 76 (124)
T TIGR03642 9 EAIDYLKKKGEPIS-DVILIYTKDPYVLSALRALKDSL--LKKFYKAEVHKIPLK---------FDDILSDEDILTFMSI 76 (124)
T ss_pred HHHHHHHhcCCCCC-eEEEEEcCCHHHHHHHHHHHHHh--HHhcCCcEEEEeccC---------ccccCCHHHHHHHHHH
Confidence 66778899998866 4556654432221 1000 0001 011122444444421 1111122223455555
Q ss_pred HHHHHHHHcCCCce--EEEEcCCCc----hHHHHHHHHHcC
Q 003636 396 VGSEITAELQGFPD--FIIGNYSDG----NLVASLLAYKMG 430 (806)
Q Consensus 396 ~~~~i~~~~~~kPD--lIh~h~~~~----~lva~lla~~lg 430 (806)
+.+.+... ..+++ -+|.+-+.| +..+.+++..+|
T Consensus 77 I~~~i~~l-~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 77 AAKEVKKE-RENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHHHH-hhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 55555544 44666 699888876 556666666665
No 220
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=35.39 E-value=2.6e+02 Score=29.77 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=20.8
Q ss_pred CCCceEEEEcC--CCchHHHHHHHHHcCCcEEEEec
Q 003636 405 QGFPDFIIGNY--SDGNLVASLLAYKMGITQCTIAH 438 (806)
Q Consensus 405 ~~kPDlIh~h~--~~~~lva~lla~~lgvp~v~t~H 438 (806)
...+|.|.... ..+.-+...+-+.+|+|++..-.
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 45788776433 33344445556678999876544
No 221
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=33.85 E-value=3.7e+02 Score=32.19 Aligned_cols=156 Identities=12% Similarity=0.092 Sum_probs=97.2
Q ss_pred CCCEEEEEecCCc-CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 003636 571 SKPIVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (806)
Q Consensus 571 ~k~iI~~vGRL~~-~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~ 649 (806)
.++..+..|.-.. +||-+..++.+.+.- .++-.|.+.... ...+++-|.=+|
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~~---------------------~~~~P~~V~NHG-- 328 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQR---------------------PPNVPSFVKNHG-- 328 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCCC---------------------CcccchhhhhcC--
Confidence 3445555555443 678788888876642 344444333221 112333455556
Q ss_pred cCcCChHHHHHHHHccCcEEEECC-CCCCCcHHHHHHHHcCCCEEEcCCcCcccc-----cc------------------
Q 003636 650 TNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEI-----IE------------------ 705 (806)
Q Consensus 650 ~~~~~~~el~~~la~aaDifV~PS-~~E~fGltvlEAMa~GlPVVAt~~GG~~Ei-----I~------------------ 705 (806)
.++..++...+.. +-+||--- -+| |=+-+||+|.|+|.|-.....+..- ..
T Consensus 329 --~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~ 403 (559)
T PF15024_consen 329 --ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEF 403 (559)
T ss_pred --cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhh
Confidence 5678899999996 88988432 345 4578999999999988765433211 00
Q ss_pred -cCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Q 003636 706 -HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYG 771 (806)
Q Consensus 706 -dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~~ 771 (806)
..-.-+.++-+|.+++-++|.+++.. +- --++--.||-+.+.+|+-.+.+.-.
T Consensus 404 iG~PhVytVd~~n~~~v~~Avk~il~~----~v---------~Py~P~efT~egmLeRv~~~ie~q~ 457 (559)
T PF15024_consen 404 IGEPHVYTVDINNSTEVEAAVKAILAT----PV---------EPYLPYEFTCEGMLERVNALIEKQD 457 (559)
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHhc----CC---------CCcCCcccCHHHHHHHHHHHHHhhh
Confidence 11245778889999999999877632 10 1244456888888888877766443
No 222
>COG1647 Esterase/lipase [General function prediction only]
Probab=33.21 E-value=1.6e+02 Score=31.14 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=23.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003636 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (806)
Q Consensus 406 ~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~ 437 (806)
+-..|.++--+.+++++..+|....++-++..
T Consensus 83 gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m 114 (243)
T COG1647 83 GYDEIAVVGLSMGGVFALKLAYHYPPKKIVPM 114 (243)
T ss_pred CCCeEEEEeecchhHHHHHHHhhCCccceeee
Confidence 34456677778999999999998876654443
No 223
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=32.95 E-value=3.5e+02 Score=27.81 Aligned_cols=77 Identities=12% Similarity=0.088 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHccCc-EEEECCCCCCCcHHHHHHHHcCCCEEEcCCc
Q 003636 622 EEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 698 (806)
Q Consensus 622 ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~aaD-ifV~PS~~E~fGltvlEAMa~GlPVVAt~~G 698 (806)
......+.+++.+++++..-.+.+.+.-+.......+-++++...| +++.|...+...-.+-++...|+|||..+.+
T Consensus 12 ~~~~~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 12 FWQQVIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3334555667777776654322211211111112233344444455 4556666666666778889999999998777
No 224
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=32.19 E-value=4.9e+02 Score=29.34 Aligned_cols=33 Identities=18% Similarity=0.171 Sum_probs=24.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003636 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (806)
Q Consensus 406 ~kPDlIh~h~~~~~lva~lla~~lgvp~v~t~H 438 (806)
+-.-+..+-.+.|+.+|.+++.....|+....+
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 444566777788889999998888777665544
No 225
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=32.14 E-value=1e+02 Score=31.70 Aligned_cols=47 Identities=21% Similarity=0.371 Sum_probs=37.8
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003636 386 WPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (806)
Q Consensus 386 ~~yl~~f~~~~~~~i~~~~~~kPDlIh~h~~~~~lva~lla~~lgvp~ 433 (806)
|..+......+.+.+.+. +.+||+|++-.-.|-..|.+++..+|++-
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~ 55 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKP 55 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCc
Confidence 556667777777777754 78999999998888889999999999853
No 226
>PRK06988 putative formyltransferase; Provisional
Probab=31.67 E-value=2.6e+02 Score=30.81 Aligned_cols=19 Identities=32% Similarity=0.569 Sum_probs=12.4
Q ss_pred HHHHHHHHCCCceeeceeEEec
Q 003636 318 EMLLRIKRQGLDISPKILIVTR 339 (806)
Q Consensus 318 eLa~~L~~~G~eV~~~ilVvT~ 339 (806)
...+.|.+.|++|. .|+|.
T Consensus 16 ~~L~~L~~~~~~i~---~Vvt~ 34 (312)
T PRK06988 16 RCLQVLLARGVDVA---LVVTH 34 (312)
T ss_pred HHHHHHHhCCCCEE---EEEcC
Confidence 34466778899876 35554
No 227
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=31.48 E-value=6.3e+02 Score=27.28 Aligned_cols=110 Identities=13% Similarity=0.061 Sum_probs=68.3
Q ss_pred EEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCC---cchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003636 575 VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKS---KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (806)
Q Consensus 575 I~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~---~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~ 651 (806)
++.++..+-..+.+.+++.+.++++.. +.++..|.-. |.-| .+--..+..+.+++.++++|++--....
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g--~~~~r~~~~k-pRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~----- 99 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELG--VHMLRGGAFK-PRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVM----- 99 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcC--CCEEEEeeec-CCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeC-----
Confidence 455565677788999999999998863 5566666332 1111 1211245677788889999875322222
Q ss_pred cCChHHHHHHHHccCcEEEECCC-CCCCcHHHH-HHHHcCCCEEEcCC
Q 003636 652 RARNGELYRYIADTKGAFVQPAF-YEAFGLTVV-EAMTCGLPTFATCH 697 (806)
Q Consensus 652 ~~~~~el~~~la~aaDifV~PS~-~E~fGltvl-EAMa~GlPVVAt~~ 697 (806)
+ .+-..++++..|++-.+|. .+. ..++ ++-..|+||+.++.
T Consensus 100 --d-~~~~~~l~~~vd~~kIga~~~~n--~~LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 100 --D-TRDVEEVADYADMLQIGSRNMQN--FELLKEVGKTKKPILLKRG 142 (266)
T ss_pred --C-hhhHHHHHHhCCEEEECcccccC--HHHHHHHhcCCCcEEEeCC
Confidence 2 2333444445889999986 334 3344 44567999999853
No 228
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=30.90 E-value=5.6e+02 Score=27.21 Aligned_cols=38 Identities=21% Similarity=0.189 Sum_probs=30.1
Q ss_pred CcEEEECCCCCCCcHHHHHHHHcCCCEEEc-CCcCccccc
Q 003636 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEII 704 (806)
Q Consensus 666 aDifV~PS~~E~fGltvlEAMa~GlPVVAt-~~GG~~EiI 704 (806)
.|++|.-...|.. .+++||.-+++|+|+- |....++.|
T Consensus 174 ~D~vvvln~~e~~-sAilEA~K~~IPTIgIVDtN~~P~li 212 (251)
T KOG0832|consen 174 PDLVVVLNPEENH-SAILEAAKMAIPTIGIVDTNCNPELI 212 (251)
T ss_pred cceeEecCccccc-HHHHHHHHhCCCeEEEecCCCCccce
Confidence 4788887777774 4899999999999996 666666666
No 229
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=30.83 E-value=2.4e+02 Score=30.12 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=22.4
Q ss_pred CCceEEE-EcCCCc---hHHHHHHHHHcCCcEEEEec
Q 003636 406 GFPDFII-GNYSDG---NLVASLLAYKMGITQCTIAH 438 (806)
Q Consensus 406 ~kPDlIh-~h~~~~---~lva~lla~~lgvp~v~t~H 438 (806)
.++++|+ +.++.. .--+.-+|+.+|+|++-...
T Consensus 64 ~~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~eR 100 (248)
T PRK08057 64 EGIDLVIDATHPYAAQISANAAAACRALGIPYLRLER 100 (248)
T ss_pred CCCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 4888887 443443 44566778899999976554
No 230
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=29.30 E-value=1e+02 Score=30.81 Aligned_cols=40 Identities=25% Similarity=0.489 Sum_probs=0.0
Q ss_pred HHHHHHHHccCcEEEECCC----CCCCcHH--HHHHHHcCCCEEEc
Q 003636 656 GELYRYIADTKGAFVQPAF----YEAFGLT--VVEAMTCGLPTFAT 695 (806)
Q Consensus 656 ~el~~~la~aaDifV~PS~----~E~fGlt--vlEAMa~GlPVVAt 695 (806)
..+.+.+++.+|++|+.-+ .|+-|+. +.+|++.|+||+++
T Consensus 84 ~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 84 AALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred HHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEE
No 231
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.01 E-value=46 Score=31.03 Aligned_cols=30 Identities=30% Similarity=0.648 Sum_probs=24.4
Q ss_pred HhhhcCCcccc----CchHHHHHHHH-HHHHHhhc
Q 003636 232 VLQGMGFEKGW----GDTAEHVLEMM-HLLLDILQ 261 (806)
Q Consensus 232 ~~~~~g~~~~w----~~~~~~~~~~~-~~l~~~~~ 261 (806)
+||+|||.-.| |..|+.+-|++ ++.+++++
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~ 59 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIA 59 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHc
Confidence 69999999999 77899999999 55565554
No 232
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=28.79 E-value=4.1e+02 Score=27.79 Aligned_cols=124 Identities=15% Similarity=0.119 Sum_probs=61.3
Q ss_pred CCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEE-E-cccccCcCChHHHHH
Q 003636 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFR-W-IAAQTNRARNGELYR 660 (806)
Q Consensus 584 ~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~-l~~~V~-f-lG~~~~~~~~~el~~ 660 (806)
.+|+|....-...-. ....+.|+|+|.+. -+..+ -.++.+.+.+.| +- +. | .+....+.....-.+
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld~--~yp~~----n~~l~~~i~~~ggll--iSe~p~~~~~~~~~f~~RNr 150 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLDQ--IYPRQ----NSKLAAKIAENGGLL--LSEYPPDTKPIKYNFPKRNR 150 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCcc--CCchh----hHHHHHHHHHcCCEE--EEecCCCCCCCcccHHHHHH
Confidence 679998877655432 23556777777541 11112 223333333333 20 00 0 011100111122334
Q ss_pred HHHccCcEEEECCCCCCCc--HHHHHHHHcCCCEEEcC-------CcCcccccccCCcEEEECCCCHHHHH
Q 003636 661 YIADTKGAFVQPAFYEAFG--LTVVEAMTCGLPTFATC-------HGGPAEIIEHGASGFHIDPYHPDQAA 722 (806)
Q Consensus 661 ~la~aaDifV~PS~~E~fG--ltvlEAMa~GlPVVAt~-------~GG~~EiI~dg~~G~li~p~d~e~la 722 (806)
.++..++..|...-.+.-| .++-.|+..|+||++-. ..|...+|.+| ...+. +.+++.
T Consensus 151 iia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~G-A~~i~---~~~d~~ 217 (220)
T TIGR00732 151 IISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQG-AALIT---SAKDIL 217 (220)
T ss_pred HHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCC-CEEEC---CHHHHH
Confidence 4443445544443333334 56788999999999973 24667788887 33333 455543
No 233
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=26.47 E-value=9e+02 Score=26.68 Aligned_cols=138 Identities=10% Similarity=0.091 Sum_probs=83.6
Q ss_pred CCCCEEEEEecCCcCCCHHHHHHHH----HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003636 570 RSKPIVFSMARLDHVKNMTGLVECY----GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (806)
Q Consensus 570 ~~k~iI~~vGRL~~~Kgi~~Llea~----~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~f 645 (806)
.+..+|.+.|-+..... +.+.++. .++..+....-.|+|||........+.........+.+++++.+ ..+..
T Consensus 111 ~~~Nvl~t~ga~~~i~~-~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~v 187 (311)
T PF06258_consen 111 RGPNVLPTLGAPNRITP-ERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG--GSLLV 187 (311)
T ss_pred CCCceEecccCCCcCCH-HHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC--CeEEE
Confidence 45668888888887553 3444433 33444444567888898655444444434455667888888776 34555
Q ss_pred cccccCcCChHHHHHHHHccC----cEEEECCCCCCCcHHHHHHHHcCCCEEEcC--CcCcccccccCCcEEEECCC
Q 003636 646 IAAQTNRARNGELYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATC--HGGPAEIIEHGASGFHIDPY 716 (806)
Q Consensus 646 lG~~~~~~~~~el~~~la~aa----DifV~PS~~E~fGltvlEAMa~GlPVVAt~--~GG~~EiI~dg~~G~li~p~ 716 (806)
+..+ -...++...+.+.. .+.+. ..++ .+-+.+.+++.--+|+|. +.-..|-+..|.--++++..
T Consensus 188 ttSR---RTp~~~~~~L~~~~~~~~~~~~~--~~~~-~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~ 258 (311)
T PF06258_consen 188 TTSR---RTPPEAEAALRELLKDNPGVYIW--DGTG-ENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLP 258 (311)
T ss_pred EcCC---CCcHHHHHHHHHhhcCCCceEEe--cCCC-CCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCC
Confidence 5532 23344444444322 23344 2233 446889999999999993 44578888888777777654
No 234
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=25.59 E-value=6.2e+02 Score=25.75 Aligned_cols=30 Identities=27% Similarity=0.326 Sum_probs=22.7
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003636 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (806)
Q Consensus 410 lIh~h~~~~~lva~lla~~lgvp~v~t~H~ 439 (806)
++..-++.|++.|..++.+.++|.|.+-=+
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPa 90 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPA 90 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCC
Confidence 444445788899999999999998776433
No 235
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=25.52 E-value=3.2e+02 Score=29.13 Aligned_cols=129 Identities=16% Similarity=0.115 Sum_probs=73.9
Q ss_pred HHHHHHccCcEEEECC-CCCCCcHHHHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcCCH
Q 003636 658 LYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENP 736 (806)
Q Consensus 658 l~~~la~aaDifV~PS-~~E~fGltvlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~dp 736 (806)
-..-+++ ||++|.-- -+|+|=-.+++.+ .+.++++...++..+- .+..--++.+|.+...+++.|.+.+. ..||
T Consensus 46 d~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L~--~~dP 120 (264)
T cd01020 46 DAAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADALV--KADP 120 (264)
T ss_pred HHHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHHH--HhCc
Confidence 3444564 78888754 3566555566655 4556666544432110 11234577899999999999999874 4689
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhchhhhhcHHHHHHHHhHHHHHHhhhhc
Q 003636 737 SHWKKISDGGLKRIYERYTWKIYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFR 797 (806)
Q Consensus 737 ~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 797 (806)
+..+...+++.++..+ ++..-+++.+....+.--+.++ -...-.|+.--|.|...
T Consensus 121 ~~~~~y~~N~~~~~~~---l~~l~~~~~~~~~~~~~~~~v~---~H~af~Y~~~~yGl~~~ 175 (264)
T cd01020 121 DNKKYYQANAKKFVAS---LKPLAAKIAELSAKYKGAPVAA---TEPVFDYLLDALGMKER 175 (264)
T ss_pred ccHHHHHHHHHHHHHH---HHHHHHHHHHHHhhCCCCeEEE---eCchHHHHHHHCCCccc
Confidence 8888888888877643 3444444444333221111111 12345666666666543
No 236
>PRK04531 acetylglutamate kinase; Provisional
Probab=25.51 E-value=1.6e+02 Score=33.74 Aligned_cols=56 Identities=7% Similarity=0.070 Sum_probs=35.9
Q ss_pred CCCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEE-eCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003636 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (806)
Q Consensus 570 ~~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~ 642 (806)
+.+..++-+|.=.-..+++.+++.++.+... +.++||| |+|+. +.++.++.|++.+
T Consensus 35 ~~~~~VIKiGG~~l~~~~~~l~~dla~L~~~--G~~~VlVHGggpq---------------I~~~l~~~gie~~ 91 (398)
T PRK04531 35 AERFAVIKVGGAVLRDDLEALASSLSFLQEV--GLTPIVVHGAGPQ---------------LDAELDAAGIEKE 91 (398)
T ss_pred CCcEEEEEEChHHhhcCHHHHHHHHHHHHHC--CCcEEEEECCCHH---------------HHHHHHHcCCCcE
Confidence 4466666666522224578888888888765 3555555 66655 6677888888654
No 237
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=25.49 E-value=2.6e+02 Score=30.06 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=25.9
Q ss_pred CceEEEEcC----CCchHHHHHHHHHcCCcEEEEecCC
Q 003636 407 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHAL 440 (806)
Q Consensus 407 kPDlIh~h~----~~~~lva~lla~~lgvp~v~t~H~l 440 (806)
.||+|.+-. .+++.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 599998532 3357899999999999988766543
No 238
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=25.39 E-value=2e+02 Score=29.66 Aligned_cols=112 Identities=16% Similarity=0.079 Sum_probs=61.8
Q ss_pred CcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC-cEEEcc-cccCcCChHHHH
Q 003636 582 DHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG-QFRWIA-AQTNRARNGELY 659 (806)
Q Consensus 582 ~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~-~V~flG-~~~~~~~~~el~ 659 (806)
+-.|=...|..|+.-+.+.. .-++++||..+. ....+++.++..|..- .=+|+| ..++.. ..
T Consensus 41 dL~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~-----------~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~----~~ 104 (196)
T TIGR01012 41 DLRKTDERLRVAAKFLVRIE-PEDILVVSARIY-----------GQKPVLKFAKVTGARAIAGRFTPGTFTNPM----QK 104 (196)
T ss_pred cHHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH-----------HHHHHHHHHHHhCCceECCeeCCCCCCCcc----cc
Confidence 33455555666655554433 568999998765 1233555566554321 226877 222221 11
Q ss_pred HHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEEEc-CCcCcccccccCCcEEEECCCC
Q 003636 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYH 717 (806)
Q Consensus 660 ~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVVAt-~~GG~~EiI~dg~~G~li~p~d 717 (806)
. +. --|+.++....+ =...+.||..+|.|||+- +.......| -+.++.+|
T Consensus 105 ~-~~-~Pdlliv~dp~~-~~~Av~EA~~l~IP~Iai~DTn~dp~~v-----dypIP~Nd 155 (196)
T TIGR01012 105 A-FR-EPEVVVVTDPRA-DHQALKEASEVGIPIVALCDTDNPLRYV-----DLVIPTNN 155 (196)
T ss_pred c-cC-CCCEEEEECCcc-ccHHHHHHHHcCCCEEEEeeCCCCCccC-----CEEECCCC
Confidence 1 12 134544433222 246899999999999996 666666655 35565443
No 239
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=25.09 E-value=32 Score=28.55 Aligned_cols=36 Identities=31% Similarity=0.392 Sum_probs=26.0
Q ss_pred CCCCCcchHHHH---HHHHhHhHHHHHHHHHHHHhcCCc
Q 003636 5 KLSRIPSIRERV---EDTLSVHRNELVSLLSRYVAQGKG 40 (806)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 40 (806)
.+.|+++|...+ +....-...+|.+||.+.++.||=
T Consensus 13 ~l~RIh~mLkmf~~~~~~~~~s~~eL~~fL~~lv~e~~L 51 (60)
T PF08672_consen 13 PLDRIHSMLKMFPKDPGGYDISLEELQEFLDRLVEEGKL 51 (60)
T ss_dssp EHHHHHHHHHHH-GGG--TT--HHHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHCCcE
Confidence 467888888887 333466778999999999998873
No 240
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=24.51 E-value=1.7e+02 Score=31.34 Aligned_cols=70 Identities=9% Similarity=0.087 Sum_probs=45.5
Q ss_pred hHHHHHHHHccCcEEEECCCCCCCcHHHHHHHHcCCCEE-EcC--CcCcccccccCCcEEEECCCCHHHHHHHH
Q 003636 655 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF-ATC--HGGPAEIIEHGASGFHIDPYHPDQAAELM 725 (806)
Q Consensus 655 ~~el~~~la~aaDifV~PS~~E~fGltvlEAMa~GlPVV-At~--~GG~~EiI~dg~~G~li~p~d~e~la~aI 725 (806)
..+..+.++. +...++|.-...+..-++|||++||-.| .++ .-...++|.=....+.++..+..++.+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 3456667774 7788888777678889999999998544 443 12244555435566777665655554444
No 241
>PRK12342 hypothetical protein; Provisional
Probab=24.25 E-value=2.4e+02 Score=30.33 Aligned_cols=34 Identities=12% Similarity=0.003 Sum_probs=26.2
Q ss_pred CceEEEEcC----CCchHHHHHHHHHcCCcEEEEecCC
Q 003636 407 FPDFIIGNY----SDGNLVASLLAYKMGITQCTIAHAL 440 (806)
Q Consensus 407 kPDlIh~h~----~~~~lva~lla~~lgvp~v~t~H~l 440 (806)
.||+|.+-. .+++.++..+|..+|+|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 599998532 2347899999999999998876644
No 242
>PLN00016 RNA-binding protein; Provisional
Probab=24.03 E-value=76 Score=35.64 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=16.4
Q ss_pred HHHHHHHHCCCceeeceeEEeccC
Q 003636 318 EMLLRIKRQGLDISPKILIVTRLI 341 (806)
Q Consensus 318 eLa~~L~~~G~eV~~~ilVvT~~~ 341 (806)
.|++.|.++||+|+ ++++..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 56778899999998 888763
No 243
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=24.00 E-value=8.5e+02 Score=28.63 Aligned_cols=108 Identities=17% Similarity=0.211 Sum_probs=71.3
Q ss_pred eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHcc-CcEEEECCC-CCCCcHH
Q 003636 604 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT-KGAFVQPAF-YEAFGLT 681 (806)
Q Consensus 604 v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~a-aDifV~PS~-~E~fGlt 681 (806)
.+++||-+..+ ...-+.+.....|. .|+... +..+....+... .|+++.=-+ -+.-|+.
T Consensus 5 ~~iLvVDDd~~-----------ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ 65 (464)
T COG2204 5 ARILVVDDDPD-----------IRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLE 65 (464)
T ss_pred CCEEEEeCCHH-----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHH
Confidence 34667766544 23335555555553 354443 456777777754 355554332 3666888
Q ss_pred HHHHHHc---CCCEEE-cCCcCc---ccccccCCcEEEECCCCHHHHHHHHHHHHH
Q 003636 682 VVEAMTC---GLPTFA-TCHGGP---AEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (806)
Q Consensus 682 vlEAMa~---GlPVVA-t~~GG~---~EiI~dg~~G~li~p~d~e~la~aI~~~l~ 730 (806)
+++.+.. ++|||. |..|.+ .+-+..|-.-|+..|-|++.+...+.+.++
T Consensus 66 ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 66 LLKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 8887766 799987 577774 444567888899999999999999988774
No 244
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=23.87 E-value=9.2e+02 Score=25.86 Aligned_cols=154 Identities=15% Similarity=0.122 Sum_probs=85.1
Q ss_pred cCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHH
Q 003636 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (806)
Q Consensus 583 ~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~l 662 (806)
+.+.++.+.++++..+++.-.+.+-+.-.... +. ++..++-+.+.+.|. +.|.+.-. .+...+.++++++
T Consensus 104 ~~~~~~~~~~~i~~ak~~G~~v~~~~~~a~~~-----~~---~~~~~~~~~~~~~g~-~~i~l~DT-~G~~~P~~v~~lv 173 (266)
T cd07944 104 HKHEFDEALPLIKAIKEKGYEVFFNLMAISGY-----SD---EELLELLELVNEIKP-DVFYIVDS-FGSMYPEDIKRII 173 (266)
T ss_pred ccccHHHHHHHHHHHHHCCCeEEEEEEeecCC-----CH---HHHHHHHHHHHhCCC-CEEEEecC-CCCCCHHHHHHHH
Confidence 45678888888888776644444333332211 22 234445555566664 45665442 2355666776665
Q ss_pred Hc---cCc--EEEECCCCCCCcHH---HHHHHHcCCCEEEcCCcCcccccccCCcEEEECCCCHHHHHHHHHHHHHhhcC
Q 003636 663 AD---TKG--AFVQPAFYEAFGLT---VVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKE 734 (806)
Q Consensus 663 a~---aaD--ifV~PS~~E~fGlt---vlEAMa~GlPVVAt~~GG~~EiI~dg~~G~li~p~d~e~la~aI~~~l~~l~~ 734 (806)
.. ..+ +-+.--....+|+. .++|+.+|.=.|-+..+|+.+- +|-. ..++++..+...+. ---
T Consensus 174 ~~l~~~~~~~~~i~~H~Hn~~Gla~AN~laA~~aGa~~vd~s~~G~G~~-----aGN~----~~E~~v~~l~~~~~-~~~ 243 (266)
T cd07944 174 SLLRSNLDKDIKLGFHAHNNLQLALANTLEAIELGVEIIDATVYGMGRG-----AGNL----PTELLLDYLNNKFG-KKY 243 (266)
T ss_pred HHHHHhcCCCceEEEEeCCCccHHHHHHHHHHHcCCCEEEEecccCCCC-----cCcH----HHHHHHHHHHHhhc-cCC
Confidence 53 222 22222235677876 4899999999999999999872 2211 35666666644321 112
Q ss_pred CHHHHHHHHHHHHHHHHHhCCH
Q 003636 735 NPSHWKKISDGGLKRIYERYTW 756 (806)
Q Consensus 735 dp~~~~~ms~~ar~~v~~~ysw 756 (806)
|.+....+++.-.+.+.++|.|
T Consensus 244 dl~~l~~~~~~~~~~~~~~~~w 265 (266)
T cd07944 244 NLEPVLELIDEYIAPLKKKYEW 265 (266)
T ss_pred CHHHHHHHHHHHHHHHHhccCC
Confidence 4444444444444455555555
No 245
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=23.64 E-value=5.6e+02 Score=29.59 Aligned_cols=104 Identities=10% Similarity=0.033 Sum_probs=67.9
Q ss_pred CCCEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003636 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (806)
Q Consensus 571 ~k~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~ 650 (806)
+..+.+..+...+..-..-|++++. +.+|++++++.-..+. ..+...+.++-.-.+.++.
T Consensus 49 ~p~vWiHaaSVGEv~a~~pLv~~l~---~~~P~~~ilvTt~T~T--------------g~e~a~~~~~~~v~h~YlP--- 108 (419)
T COG1519 49 GPLVWIHAASVGEVLAALPLVRALR---ERFPDLRILVTTMTPT--------------GAERAAALFGDSVIHQYLP--- 108 (419)
T ss_pred CCeEEEEecchhHHHHHHHHHHHHH---HhCCCCCEEEEecCcc--------------HHHHHHHHcCCCeEEEecC---
Confidence 3457788888888777666766654 5679999999887665 1223334444334566665
Q ss_pred CcCChHHHHHHHHc-cCcEEEECCCCCCCcHHHHHHHHcCCCEEEcC
Q 003636 651 NRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (806)
Q Consensus 651 ~~~~~~el~~~la~-aaDifV~PS~~E~fGltvlEAMa~GlPVVAt~ 696 (806)
..-..-+.++++. .-|+.|+ ...|-+|+++.|+-..|+|++.-+
T Consensus 109 -~D~~~~v~rFl~~~~P~l~Ii-~EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 109 -LDLPIAVRRFLRKWRPKLLII-METELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred -cCchHHHHHHHHhcCCCEEEE-EeccccHHHHHHHHHcCCCEEEEe
Confidence 2233455555542 1344443 346889999999999999998764
No 246
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=22.17 E-value=7.7e+02 Score=24.35 Aligned_cols=128 Identities=18% Similarity=0.227 Sum_probs=65.9
Q ss_pred EEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcCChHHHHHHHHc----cCcEEEECCCCCCCcHH
Q 003636 606 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD----TKGAFVQPAFYEAFGLT 681 (806)
Q Consensus 606 LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~~~~~el~~~la~----aaDifV~PS~~E~fGlt 681 (806)
.+|.|+..| ....++.....+++|+.-.++..+.. -..+++.+++.. .+++||.-+=.++ .|.
T Consensus 4 ~Ii~gs~SD---------~~~~~~a~~~L~~~gi~~~~~V~saH---R~p~~l~~~~~~~~~~~~~viIa~AG~~a-~Lp 70 (150)
T PF00731_consen 4 AIIMGSTSD---------LPIAEEAAKTLEEFGIPYEVRVASAH---RTPERLLEFVKEYEARGADVIIAVAGMSA-ALP 70 (150)
T ss_dssp EEEESSGGG---------HHHHHHHHHHHHHTT-EEEEEE--TT---TSHHHHHHHHHHTTTTTESEEEEEEESS---HH
T ss_pred EEEeCCHHH---------HHHHHHHHHHHHHcCCCEEEEEEecc---CCHHHHHHHHHHhccCCCEEEEEECCCcc-cch
Confidence 456666544 34566777778888887778877742 345667777653 2467777654443 455
Q ss_pred HHHHHHcCCCEEEc--CCc---Ccc---cccc--cCCcEEEECCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 003636 682 VVEAMTCGLPTFAT--CHG---GPA---EIIE--HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (806)
Q Consensus 682 vlEAMa~GlPVVAt--~~G---G~~---EiI~--dg~~G~li~p~d~e~la~aI~~~l~~l~~dp~~~~~ms~~ar~ 748 (806)
-+=|-..-+|||+- ..| |.. .+++ .|..--.+..+++...|-.-.+++. ..|++.|+++...-.+
T Consensus 71 gvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa--~~d~~l~~kl~~~~~~ 145 (150)
T PF00731_consen 71 GVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILA--LKDPELREKLRAYREK 145 (150)
T ss_dssp HHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHH--TT-HHHHHHHHHHHHH
T ss_pred hhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHh--cCCHHHHHHHHHHHHH
Confidence 55566668888885 222 222 2222 1221122333344444444444442 3789998887665443
No 247
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=22.14 E-value=7.2e+02 Score=23.97 Aligned_cols=74 Identities=19% Similarity=0.273 Sum_probs=49.9
Q ss_pred HHHHHHHH-ccCcEEEECCC-CCCCcHHHHHHHHcCCCEEEcC-CcCcc---cccccCCcEEEECCCCHHHHHHHHHHHH
Q 003636 656 GELYRYIA-DTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATC-HGGPA---EIIEHGASGFHIDPYHPDQAAELMADFF 729 (806)
Q Consensus 656 ~el~~~la-~aaDifV~PS~-~E~fGltvlEAMa~GlPVVAt~-~GG~~---EiI~dg~~G~li~p~d~e~la~aI~~~l 729 (806)
.+....+. ...|+++.-.. .+.-|..+++.+....|+|+.. ..... +.+..|..|++..|.+.+++.++|..++
T Consensus 37 ~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 37 REALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 44444443 23577776543 3445777888887788887753 33222 3456788999999999999999997765
No 248
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=21.78 E-value=89 Score=35.90 Aligned_cols=39 Identities=23% Similarity=0.610 Sum_probs=27.0
Q ss_pred ceEEEEcccccCccccccCCCCcccccchhHHHHHHHHHHHHHHHHHCCCceeeceeEEeccCCCCCCCc
Q 003636 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT 348 (806)
Q Consensus 279 ~rIvivs~h~~~~~~~~lG~p~tGG~~vyvl~~~raL~~eLa~~L~~~G~eV~~~ilVvT~~~~~~~g~~ 348 (806)
|||++|.-..+ |+++|.- |.+.||+|. .|+| +|+.+|..
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~~ 39 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGKA 39 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCCc
Confidence 78988876544 6777765 799999985 2444 67766653
No 249
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=21.18 E-value=4.5e+02 Score=27.75 Aligned_cols=51 Identities=22% Similarity=0.251 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCceEEE-EcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003636 388 YLETFTEDVGSEITAELQGFPDFII-GNYSDG-NLVASLLAYKMGITQCTIAH 438 (806)
Q Consensus 388 yl~~f~~~~~~~i~~~~~~kPDlIh-~h~~~~-~lva~lla~~lgvp~v~t~H 438 (806)
|.+.+.....+.+-.++....-|+- .||..+ -.-....++.+.+|+|++.-
T Consensus 56 yres~~ks~~rlldSalkn~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALKNYLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhcceEEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 5566666777766555442332222 355444 23445567788899988654
No 250
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=20.43 E-value=1.4e+02 Score=24.81 Aligned_cols=45 Identities=16% Similarity=0.308 Sum_probs=34.0
Q ss_pred cchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhh
Q 003636 10 PSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIF 55 (806)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 (806)
.||.|.+.+---...++|..+|.-|.+...+- .+.-|+.+|.+++
T Consensus 10 ~SM~EMI~~~~i~~~~~LeeLL~cYL~LN~~~-~H~~Iv~aF~dv~ 54 (59)
T PF04844_consen 10 ESMVEMIEENGIRDWDDLEELLACYLSLNSPE-HHKFIVEAFVDVW 54 (59)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhCChh-hhhHHHHHHHHHH
Confidence 47888877776668899999999998876651 2344788888876
No 251
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=20.11 E-value=9.2e+02 Score=24.88 Aligned_cols=109 Identities=17% Similarity=0.223 Sum_probs=67.9
Q ss_pred CEEEEEecCCcCCCHHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEcccccCc
Q 003636 573 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 652 (806)
Q Consensus 573 ~iI~~vGRL~~~Kgi~~Llea~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~~~~l~~~V~flG~~~~~ 652 (806)
++++=+|.+-....++..+++ .+.+++.+.... ++.+.+... +...+.| -
T Consensus 62 ~~~iGaGTV~~~~~~~~a~~a---------GA~fivsp~~~~--------------~v~~~~~~~---~~~~~~G----~ 111 (206)
T PRK09140 62 RALIGAGTVLSPEQVDRLADA---------GGRLIVTPNTDP--------------EVIRRAVAL---GMVVMPG----V 111 (206)
T ss_pred CcEEeEEecCCHHHHHHHHHc---------CCCEEECCCCCH--------------HHHHHHHHC---CCcEEcc----c
Confidence 366667776654443333322 567888876533 344445544 3467777 4
Q ss_pred CChHHHHHHHHccCcEE-EECCCCCCCcHHHHHHHHc----CCCEEEcC---CcCcccccccCCcEEEE
Q 003636 653 ARNGELYRYIADTKGAF-VQPAFYEAFGLTVVEAMTC----GLPTFATC---HGGPAEIIEHGASGFHI 713 (806)
Q Consensus 653 ~~~~el~~~la~aaDif-V~PS~~E~fGltvlEAMa~----GlPVVAt~---~GG~~EiI~dg~~G~li 713 (806)
.+.+|+.+.+...+|.+ ++|+ ..+|...+.++.. .+|++++. .....+++..|..|+.+
T Consensus 112 ~t~~E~~~A~~~Gad~vk~Fpa--~~~G~~~l~~l~~~~~~~ipvvaiGGI~~~n~~~~~~aGa~~vav 178 (206)
T PRK09140 112 ATPTEAFAALRAGAQALKLFPA--SQLGPAGIKALRAVLPPDVPVFAVGGVTPENLAPYLAAGAAGFGL 178 (206)
T ss_pred CCHHHHHHHHHcCCCEEEECCC--CCCCHHHHHHHHhhcCCCCeEEEECCCCHHHHHHHHHCCCeEEEE
Confidence 45678888887678876 4574 5688888877763 47788873 11236677778777764
Done!