Query 003637
Match_columns 806
No_of_seqs 373 out of 3435
Neff 7.5
Searched_HMMs 13730
Date Tue Mar 26 18:40:55 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003637.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1685-1688//hhsearch_scop/003637hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ltla_ b.40.4.11 (A:) DNA rep 100.0 2.4E-44 0 328.6 27.1 232 132-392 5-238 (239)
2 d1g8pa_ c.37.1.20 (A:) ATPase 100.0 1.7E-32 1.3E-36 244.6 13.5 265 445-746 6-306 (333)
3 d1ny5a2 c.37.1.20 (A:138-384) 99.8 3.6E-18 2.6E-22 143.2 13.8 200 480-741 24-246 (247)
4 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.7 7.1E-15 5.2E-19 119.9 19.9 220 447-745 10-235 (239)
5 d1in4a2 c.37.1.20 (A:17-254) H 99.7 2.6E-15 1.9E-19 123.0 17.0 219 447-745 10-234 (238)
6 d1r6bx3 c.37.1.20 (X:437-751) 99.6 1.2E-13 9E-18 111.1 19.3 234 437-719 13-273 (315)
7 d1lv7a_ c.37.1.20 (A:) AAA dom 99.6 3.5E-14 2.5E-18 115.0 12.9 217 447-745 13-252 (256)
8 d1ixza_ c.37.1.20 (A:) AAA dom 99.6 4.8E-15 3.5E-19 121.1 8.2 182 481-742 44-246 (247)
9 d1njfa_ c.37.1.20 (A:) delta p 99.5 1.5E-13 1.1E-17 110.6 15.0 207 447-742 13-237 (239)
10 d1ofha_ c.37.1.20 (A:) HslU {H 99.5 6.6E-14 4.8E-18 113.0 10.6 231 441-720 9-267 (309)
11 d1um8a_ c.37.1.20 (A:) ClpX {H 99.5 2.1E-13 1.5E-17 109.5 10.8 244 440-721 11-331 (364)
12 d1sxjc2 c.37.1.20 (C:12-238) R 99.5 9E-14 6.5E-18 112.1 8.5 203 447-742 15-225 (227)
13 d1qvra3 c.37.1.20 (A:536-850) 99.5 6.5E-13 4.8E-17 106.0 12.3 221 438-689 15-262 (315)
14 d1r6bx2 c.37.1.20 (X:169-436) 99.4 2.4E-12 1.8E-16 101.9 14.3 205 446-691 18-239 (268)
15 d1sxjd2 c.37.1.20 (D:26-262) R 99.4 9.2E-12 6.7E-16 97.8 14.9 211 447-743 13-236 (237)
16 d1sxjb2 c.37.1.20 (B:7-230) Re 99.4 8.3E-12 6E-16 98.2 14.5 198 447-742 16-222 (224)
17 d1iqpa2 c.37.1.20 (A:2-232) Re 99.4 2.8E-12 2E-16 101.5 11.6 201 447-741 25-229 (231)
18 d1e32a2 c.37.1.20 (A:201-458) 99.4 1.4E-12 1E-16 103.7 9.8 161 447-644 5-186 (258)
19 d1qvra2 c.37.1.20 (A:149-535) 99.3 2.7E-11 2E-15 94.5 12.4 210 446-697 22-248 (387)
20 d1sxje2 c.37.1.20 (E:4-255) Re 99.2 7.5E-11 5.4E-15 91.4 12.2 176 447-689 12-222 (252)
21 d1fnna2 c.37.1.20 (A:1-276) CD 99.2 9.2E-11 6.7E-15 90.8 10.9 212 481-745 45-273 (276)
22 d1g41a_ c.37.1.20 (A:) HslU {H 99.2 6.7E-10 4.9E-14 84.7 14.8 146 543-726 249-407 (443)
23 d1r7ra3 c.37.1.20 (A:471-735) 99.1 1.3E-11 9.4E-16 96.8 4.2 132 481-644 43-192 (265)
24 d1sxja2 c.37.1.20 (A:295-547) 99.0 1.1E-08 8E-13 76.1 14.4 188 481-744 54-248 (253)
25 d1d2na_ c.37.1.20 (A:) Hexamer 98.9 2.3E-10 1.7E-14 87.9 2.7 116 481-626 42-171 (246)
26 d1a5ta2 c.37.1.20 (A:1-207) de 98.8 4.6E-08 3.4E-12 71.6 12.9 147 481-689 26-193 (207)
27 d1w5sa2 c.37.1.20 (A:7-293) CD 98.8 2.1E-09 1.6E-13 81.1 5.5 208 481-743 48-285 (287)
28 d1jbka_ c.37.1.20 (A:) ClpB, A 98.7 1.4E-09 1E-13 82.5 1.3 154 446-636 22-191 (195)
29 d1w44a_ c.37.1.11 (A:) NTPase 98.6 1E-10 7.3E-15 90.5 -6.7 140 481-638 125-269 (321)
30 d1svma_ c.37.1.20 (A:) Papillo 98.6 4.6E-08 3.4E-12 71.6 5.6 29 481-509 156-184 (362)
31 d1l8qa2 c.37.1.20 (A:77-289) C 98.4 6.3E-07 4.6E-11 63.6 7.7 171 481-723 38-212 (213)
32 d2gnoa2 c.37.1.20 (A:11-208) g 98.2 2.4E-06 1.8E-10 59.4 8.3 112 480-623 16-133 (198)
33 d1u0ja_ c.37.1.20 (A:) Rep 40 97.5 0.0025 1.8E-07 38.1 12.9 149 481-675 106-255 (267)
34 d1tuea_ c.37.1.20 (A:) Replica 97.4 0.0006 4.4E-08 42.5 8.5 110 481-620 55-166 (205)
35 d1gvnb_ c.37.1.21 (B:) Plasmid 96.9 0.00064 4.7E-08 42.3 4.8 26 481-506 34-59 (273)
36 d1ye8a1 c.37.1.11 (A:1-178) Hy 96.6 0.001 7.5E-08 40.8 4.4 25 481-505 2-26 (178)
37 d1w36d1 c.37.1.19 (D:2-360) Ex 96.5 0.0057 4.1E-07 35.6 7.7 46 439-499 138-183 (359)
38 d2i3ba1 c.37.1.11 (A:1-189) Ca 95.4 0.0042 3.1E-07 36.5 2.8 24 481-504 3-26 (189)
39 d1lw7a2 c.37.1.1 (A:220-411) T 95.2 0.0086 6.3E-07 34.3 3.7 25 481-505 9-33 (192)
40 d2bdta1 c.37.1.25 (A:1-176) Hy 95.1 0.0065 4.7E-07 35.2 3.0 28 481-508 4-31 (176)
41 d1kaga_ c.37.1.2 (A:) Shikimat 95.1 0.0097 7.1E-07 33.9 3.8 26 481-506 4-29 (169)
42 d1y63a_ c.37.1.1 (A:) Probable 95.0 0.011 7.9E-07 33.6 3.9 28 478-505 4-31 (174)
43 d2a5yb3 c.37.1.20 (B:109-385) 94.8 0.013 9.3E-07 33.1 3.7 50 445-503 19-68 (277)
44 d1rkba_ c.37.1.1 (A:) Adenylat 94.6 0.012 9.1E-07 33.2 3.2 25 481-505 6-30 (173)
45 d2fnaa2 c.37.1.20 (A:1-283) Ar 94.4 0.03 2.2E-06 30.4 4.9 26 481-506 31-56 (283)
46 d1m8pa3 c.37.1.15 (A:391-573) 94.1 0.017 1.3E-06 32.2 3.2 26 479-504 6-31 (183)
47 d1qhxa_ c.37.1.3 (A:) Chloramp 94.0 0.027 2E-06 30.8 4.0 28 481-508 5-32 (178)
48 d1viaa_ c.37.1.2 (A:) Shikimat 93.9 0.02 1.5E-06 31.7 3.2 26 481-506 2-27 (161)
49 d2iyva1 c.37.1.2 (A:2-166) Shi 93.6 0.028 2E-06 30.7 3.5 26 481-506 3-28 (165)
50 d1e6ca_ c.37.1.2 (A:) Shikimat 93.4 0.029 2.1E-06 30.6 3.2 26 481-506 4-29 (170)
51 d1ak2a1 c.37.1.1 (A:14-146,A:1 93.2 0.035 2.5E-06 30.0 3.5 25 479-503 3-27 (190)
52 d1zp6a1 c.37.1.25 (A:6-181) Hy 93.2 0.026 1.9E-06 30.9 2.7 26 481-506 6-31 (176)
53 d1zina1 c.37.1.1 (A:1-125,A:16 93.2 0.032 2.3E-06 30.2 3.2 24 481-504 2-25 (182)
54 d2cdna1 c.37.1.1 (A:1-181) Ade 93.1 0.033 2.4E-06 30.2 3.2 24 480-503 1-24 (181)
55 d1ly1a_ c.37.1.1 (A:) Polynucl 93.0 0.047 3.4E-06 29.1 3.8 25 481-505 4-28 (152)
56 d1zaka1 c.37.1.1 (A:3-127,A:15 92.6 0.041 3E-06 29.5 3.1 26 480-505 4-29 (189)
57 d1knqa_ c.37.1.17 (A:) Glucona 92.6 0.039 2.9E-06 29.6 3.0 24 481-504 8-31 (171)
58 d1x6va3 c.37.1.4 (A:34-228) Ad 92.4 0.023 1.7E-06 31.2 1.7 24 481-504 21-44 (195)
59 d1s3ga1 c.37.1.1 (A:1-125,A:16 92.3 0.038 2.8E-06 29.7 2.6 24 481-504 2-25 (182)
60 d1ukza_ c.37.1.1 (A:) Uridylat 92.3 0.044 3.2E-06 29.3 2.9 25 481-505 10-34 (196)
61 d1qf9a_ c.37.1.1 (A:) UMP/CMP 92.2 0.045 3.3E-06 29.2 2.8 24 481-504 8-31 (194)
62 d1a1va1 c.37.1.14 (A:190-325) 91.9 0.18 1.3E-05 24.9 5.8 90 480-569 9-120 (136)
63 d2ak3a1 c.37.1.1 (A:0-124,A:16 91.8 0.07 5.1E-06 27.9 3.5 25 480-504 7-31 (189)
64 d1bifa1 c.37.1.7 (A:37-249) 6- 91.8 0.063 4.6E-06 28.2 3.3 24 481-504 4-27 (213)
65 d1akya1 c.37.1.1 (A:3-130,A:16 91.4 0.074 5.4E-06 27.7 3.3 24 480-503 3-26 (180)
66 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 91.4 0.27 2E-05 23.7 6.2 23 480-502 14-36 (186)
67 d3adka_ c.37.1.1 (A:) Adenylat 91.3 0.057 4.2E-06 28.5 2.6 24 481-504 10-33 (194)
68 d1teva_ c.37.1.1 (A:) UMP/CMP 91.0 0.079 5.7E-06 27.5 3.1 23 481-503 3-25 (194)
69 d1e4va1 c.37.1.1 (A:1-121,A:15 90.9 0.059 4.3E-06 28.4 2.3 25 481-505 2-26 (179)
70 d1g6oa_ c.37.1.11 (A:) Hexamer 90.8 0.16 1.2E-05 25.2 4.6 26 481-506 168-193 (323)
71 d2bcgy1 c.37.1.8 (Y:3-196) GTP 90.7 0.3 2.2E-05 23.4 5.9 23 481-503 8-30 (194)
72 d1z08a1 c.37.1.8 (A:17-183) Ra 90.7 0.32 2.3E-05 23.2 6.0 22 481-502 5-26 (167)
73 d1gkya_ c.37.1.1 (A:) Guanylat 90.4 0.15 1.1E-05 25.5 4.1 26 481-506 3-28 (186)
74 d1upta_ c.37.1.8 (A:) ADP-ribo 90.4 0.12 8.7E-06 26.2 3.6 25 479-503 5-29 (169)
75 d1r8sa_ c.37.1.8 (A:) ADP-ribo 90.1 0.11 8.1E-06 26.4 3.2 24 480-503 1-24 (160)
76 d1ckea_ c.37.1.1 (A:) CMP kina 90.0 0.076 5.5E-06 27.6 2.3 26 481-506 5-30 (225)
77 d1yj5a2 c.37.1.1 (A:351-522) 5 89.9 0.074 5.4E-06 27.7 2.2 25 478-502 13-37 (172)
78 d1ksha_ c.37.1.8 (A:) ADP-ribo 89.6 0.11 7.9E-06 26.5 2.8 23 479-501 2-24 (165)
79 d1khta_ c.37.1.1 (A:) Adenylat 89.5 0.11 7.9E-06 26.5 2.8 24 481-504 3-26 (190)
80 d1q3ta_ c.37.1.1 (A:) CMP kina 89.4 0.11 7.7E-06 26.6 2.6 26 480-505 4-29 (223)
81 d2atva1 c.37.1.8 (A:5-172) Ras 89.3 0.15 1.1E-05 25.6 3.3 24 479-502 2-25 (168)
82 d1np6a_ c.37.1.10 (A:) Molybdo 88.8 0.13 9.5E-06 25.9 2.8 24 481-504 4-27 (170)
83 d1sq5a_ c.37.1.6 (A:) Pantothe 88.7 0.53 3.8E-05 21.6 6.3 81 416-505 20-106 (308)
84 d2a5ja1 c.37.1.8 (A:9-181) Rab 88.6 0.16 1.2E-05 25.2 3.2 22 481-502 5-26 (173)
85 d1lvga_ c.37.1.1 (A:) Guanylat 88.6 0.15 1.1E-05 25.5 3.0 26 481-506 2-27 (190)
86 d2fh5b1 c.37.1.8 (B:63-269) Si 88.5 0.25 1.8E-05 23.9 4.0 26 481-506 2-27 (207)
87 d2qtvb1 c.37.1.8 (B:24-189) SA 88.5 0.54 4E-05 21.5 8.0 22 481-502 2-23 (166)
88 d1z2aa1 c.37.1.8 (A:8-171) Rab 88.4 0.17 1.2E-05 25.2 3.1 23 480-502 3-25 (164)
89 d1znwa1 c.37.1.1 (A:20-201) Gu 87.7 0.25 1.8E-05 23.9 3.7 25 481-505 4-28 (182)
90 d1kaoa_ c.37.1.8 (A:) Rap2a {H 87.6 0.2 1.5E-05 24.6 3.1 24 480-503 4-27 (167)
91 d1yrba1 c.37.1.10 (A:1-244) AT 87.6 0.27 2E-05 23.7 3.7 24 481-504 2-25 (244)
92 d2erya1 c.37.1.8 (A:10-180) r- 87.5 0.18 1.3E-05 24.9 2.8 23 480-502 6-28 (171)
93 d1szpa2 c.37.1.11 (A:145-395) 87.5 0.17 1.2E-05 25.2 2.7 25 479-503 34-58 (251)
94 d1v5wa_ c.37.1.11 (A:) Meiotic 87.5 0.35 2.5E-05 22.9 4.3 28 477-504 35-62 (258)
95 d1tf7a2 c.37.1.11 (A:256-497) 87.4 0.23 1.7E-05 24.2 3.3 24 480-503 27-50 (242)
96 d1n0wa_ c.37.1.11 (A:) DNA rep 87.3 0.47 3.4E-05 22.0 4.8 26 480-505 24-49 (242)
97 d1z0fa1 c.37.1.8 (A:8-173) Rab 87.3 0.22 1.6E-05 24.3 3.1 23 481-503 6-28 (166)
98 d1c1ya_ c.37.1.8 (A:) Rap1A {H 87.1 0.23 1.6E-05 24.3 3.1 24 480-503 4-27 (167)
99 d1zj6a1 c.37.1.8 (A:2-178) ADP 86.9 0.21 1.6E-05 24.4 2.9 23 480-502 16-38 (177)
100 d1z0ja1 c.37.1.8 (A:2-168) Rab 86.7 0.23 1.6E-05 24.2 2.9 23 480-502 5-27 (167)
101 d2fn4a1 c.37.1.8 (A:24-196) r- 86.7 0.21 1.6E-05 24.4 2.8 23 480-502 7-29 (173)
102 d1r2qa_ c.37.1.8 (A:) Rab5a {H 86.6 0.25 1.8E-05 23.9 3.1 24 480-503 7-30 (170)
103 d1x3sa1 c.37.1.8 (A:2-178) Rab 86.6 0.25 1.8E-05 24.0 3.1 24 480-503 8-31 (177)
104 d1zd9a1 c.37.1.8 (A:18-181) AD 86.4 0.24 1.8E-05 24.0 3.0 25 479-503 2-26 (164)
105 d2f9la1 c.37.1.8 (A:8-182) Rab 86.4 0.4 2.9E-05 22.5 4.1 24 480-503 5-28 (175)
106 d1ctqa_ c.37.1.8 (A:) cH-p21 R 86.3 0.23 1.7E-05 24.1 2.8 23 480-502 4-26 (166)
107 d1ky3a_ c.37.1.8 (A:) Rab-rela 86.2 0.26 1.9E-05 23.8 3.1 23 480-502 3-25 (175)
108 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 86.2 0.27 2E-05 23.7 3.1 22 481-502 4-25 (184)
109 d1pzna2 c.37.1.11 (A:96-349) D 86.1 0.48 3.5E-05 21.9 4.4 26 480-505 37-62 (254)
110 d1nksa_ c.37.1.1 (A:) Adenylat 86.1 0.21 1.5E-05 24.5 2.5 24 482-505 4-27 (194)
111 d3raba_ c.37.1.8 (A:) Rab3a {R 86.1 0.28 2E-05 23.6 3.1 23 481-503 7-29 (169)
112 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 86.0 0.25 1.8E-05 24.0 2.8 24 479-502 3-26 (170)
113 d1m7ga_ c.37.1.4 (A:) Adenosin 85.9 0.25 1.8E-05 24.0 2.8 24 480-503 25-48 (208)
114 d2f7sa1 c.37.1.8 (A:5-190) Rab 85.8 0.27 2E-05 23.7 3.0 22 480-501 6-27 (186)
115 d2ew1a1 c.37.1.8 (A:4-174) Rab 85.6 0.26 1.9E-05 23.8 2.8 23 481-503 7-29 (171)
116 d1u8za_ c.37.1.8 (A:) Ras-rela 85.6 0.3 2.2E-05 23.3 3.1 21 481-501 6-26 (168)
117 d1z06a1 c.37.1.8 (A:32-196) Ra 85.6 0.3 2.2E-05 23.4 3.1 23 481-503 4-26 (165)
118 d2erxa1 c.37.1.8 (A:6-176) di- 85.5 0.27 2E-05 23.7 2.9 22 480-501 3-24 (171)
119 d1mh1a_ c.37.1.8 (A:) Rac {Hum 85.5 0.3 2.2E-05 23.4 3.1 24 479-502 5-28 (183)
120 d1nrjb_ c.37.1.8 (B:) Signal r 85.5 0.31 2.2E-05 23.3 3.1 23 481-503 5-27 (209)
121 d1u0la2 c.37.1.8 (A:69-293) Pr 85.4 0.37 2.7E-05 22.8 3.5 20 481-500 97-116 (225)
122 d2g3ya1 c.37.1.8 (A:73-244) GT 84.9 0.31 2.3E-05 23.3 2.9 22 481-502 5-26 (172)
123 d2i1qa2 c.37.1.11 (A:65-322) D 84.9 0.39 2.9E-05 22.5 3.5 27 479-505 34-60 (258)
124 d1moza_ c.37.1.8 (A:) ADP-ribo 84.9 0.38 2.8E-05 22.6 3.4 21 480-500 18-38 (182)
125 d1fzqa_ c.37.1.8 (A:) ADP-ribo 84.9 0.26 1.9E-05 23.8 2.6 23 479-501 16-38 (176)
126 d2atxa1 c.37.1.8 (A:9-193) Rho 84.6 0.3 2.2E-05 23.3 2.8 24 480-503 10-33 (185)
127 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 84.6 0.31 2.3E-05 23.2 2.8 23 481-503 4-26 (177)
128 d1yzqa1 c.37.1.8 (A:14-177) Ra 84.6 0.86 6.3E-05 20.1 6.7 23 481-503 2-24 (164)
129 d1xtqa1 c.37.1.8 (A:3-169) GTP 84.5 0.32 2.3E-05 23.2 2.8 23 480-502 5-27 (167)
130 d2gjsa1 c.37.1.8 (A:91-258) Ra 84.5 0.34 2.4E-05 23.0 2.9 23 481-503 3-25 (168)
131 d1s96a_ c.37.1.1 (A:) Guanylat 84.4 0.56 4E-05 21.5 4.1 25 481-505 4-28 (205)
132 d2bmea1 c.37.1.8 (A:6-179) Rab 84.4 0.32 2.4E-05 23.1 2.8 22 481-502 7-28 (174)
133 d2gj8a1 c.37.1.8 (A:216-376) P 84.4 0.31 2.3E-05 23.3 2.7 23 480-502 2-24 (161)
134 d1e0sa_ c.37.1.8 (A:) ADP-ribo 84.4 0.21 1.5E-05 24.5 1.8 23 479-501 12-34 (173)
135 d1rz3a_ c.37.1.6 (A:) Hypothet 84.3 0.36 2.6E-05 22.8 3.1 26 479-504 22-47 (198)
136 d1uaaa1 c.37.1.19 (A:2-307) DE 84.2 0.27 1.9E-05 23.7 2.3 23 481-503 16-39 (306)
137 d1g16a_ c.37.1.8 (A:) Rab-rela 84.2 0.33 2.4E-05 23.1 2.8 24 480-503 3-26 (166)
138 d1x1ra1 c.37.1.8 (A:10-178) Ra 84.1 0.39 2.8E-05 22.6 3.1 23 480-502 5-27 (169)
139 d1h65a_ c.37.1.8 (A:) Chloropl 83.8 0.31 2.3E-05 23.3 2.5 23 479-501 32-54 (257)
140 d1kgda_ c.37.1.1 (A:) Guanylat 83.7 0.64 4.7E-05 21.0 4.1 27 481-507 5-31 (178)
141 d2g6ba1 c.37.1.8 (A:58-227) Ra 83.7 0.42 3E-05 22.4 3.1 22 481-502 8-29 (170)
142 d1svia_ c.37.1.8 (A:) Probable 83.2 0.38 2.8E-05 22.7 2.8 21 481-501 25-45 (195)
143 d1wb1a4 c.37.1.8 (A:1-179) Elo 83.1 0.94 6.9E-05 19.9 4.8 25 479-503 5-29 (179)
144 d1wmsa_ c.37.1.8 (A:) Rab9a {H 83.0 0.99 7.2E-05 19.7 6.5 23 481-503 8-30 (174)
145 d1m7ba_ c.37.1.8 (A:) RhoE (RN 83.0 0.4 2.9E-05 22.5 2.8 22 481-502 4-25 (179)
146 d1zcba2 c.37.1.8 (A:47-75,A:20 82.8 0.36 2.6E-05 22.8 2.5 21 480-500 3-23 (200)
147 d2ngra_ c.37.1.8 (A:) CDC42 {H 82.5 0.42 3.1E-05 22.3 2.8 23 480-502 4-26 (191)
148 d2bmja1 c.37.1.8 (A:66-240) Ce 82.1 0.51 3.7E-05 21.8 3.1 25 479-503 5-29 (175)
149 d2bv3a2 c.37.1.8 (A:7-282) Elo 81.9 1.1 7.9E-05 19.4 5.9 90 481-570 8-123 (276)
150 d1mkya1 c.37.1.8 (A:2-172) Pro 81.6 0.51 3.7E-05 21.7 2.9 21 481-501 2-22 (171)
151 d1pjra1 c.37.1.19 (A:1-318) DE 81.3 0.44 3.2E-05 22.2 2.5 23 481-503 26-49 (318)
152 d2cxxa1 c.37.1.8 (A:2-185) GTP 81.3 0.45 3.3E-05 22.1 2.6 21 481-501 2-22 (184)
153 d2fu5c1 c.37.1.8 (C:3-175) Rab 81.1 0.3 2.1E-05 23.4 1.6 21 481-501 8-28 (173)
154 d1tf7a1 c.37.1.11 (A:14-255) C 81.0 0.6 4.4E-05 21.2 3.2 22 480-501 27-48 (242)
155 d2dy1a2 c.37.1.8 (A:8-274) Elo 79.6 1.3 9.4E-05 18.9 5.9 90 481-570 4-119 (267)
156 d1i2ma_ c.37.1.8 (A:) Ran {Hum 79.3 0.34 2.5E-05 23.0 1.4 21 481-501 5-25 (170)
157 d1nlfa_ c.37.1.11 (A:) Hexamer 79.2 0.61 4.4E-05 21.2 2.7 27 476-503 27-53 (274)
158 d1vmaa2 c.37.1.10 (A:82-294) G 79.1 1.1 8E-05 19.4 4.0 24 480-503 12-35 (213)
159 d1wf3a1 c.37.1.8 (A:3-180) GTP 79.0 0.71 5.2E-05 20.7 3.0 22 481-502 7-28 (178)
160 d2eyqa3 c.37.1.19 (A:546-778) 78.8 1.4 9.9E-05 18.7 10.2 101 481-597 78-215 (233)
161 d1g7sa4 c.37.1.8 (A:1-227) Ini 78.8 1.4 9.9E-05 18.7 8.5 94 476-570 3-122 (227)
162 d1mkya2 c.37.1.8 (A:173-358) P 78.8 0.74 5.4E-05 20.6 3.0 23 479-501 8-30 (186)
163 d1egaa1 c.37.1.8 (A:4-182) GTP 78.4 0.68 5E-05 20.8 2.7 21 481-501 7-27 (179)
164 d1azta2 c.37.1.8 (A:35-65,A:20 78.4 0.7 5.1E-05 20.8 2.8 23 480-502 7-29 (221)
165 d1udxa2 c.37.1.8 (A:157-336) O 78.3 0.47 3.4E-05 22.0 1.9 21 481-501 3-23 (180)
166 d1j8yf2 c.37.1.10 (F:87-297) G 78.3 1.1 7.8E-05 19.5 3.7 24 480-503 13-36 (211)
167 d2onka1 c.37.1.12 (A:1-240) Mo 78.0 0.68 5E-05 20.8 2.6 25 481-505 26-50 (240)
168 d1ls1a2 c.37.1.10 (A:89-295) G 77.9 0.79 5.7E-05 20.4 2.9 23 481-503 12-34 (207)
169 d1kkma_ c.91.1.2 (A:) HPr kina 77.8 0.9 6.6E-05 20.0 3.2 23 480-502 15-37 (176)
170 d1e9ra_ c.37.1.11 (A:) Bacteri 77.8 0.85 6.2E-05 20.2 3.1 25 478-502 49-73 (433)
171 d1okkd2 c.37.1.10 (D:97-303) G 77.7 0.76 5.5E-05 20.5 2.8 23 481-503 8-30 (207)
172 d2qy9a2 c.37.1.10 (A:285-495) 77.6 1.2 8.4E-05 19.2 3.7 23 481-503 11-33 (211)
173 d1uj2a_ c.37.1.6 (A:) Uridine- 77.4 1.1 7.9E-05 19.4 3.5 26 481-506 4-29 (213)
174 d3b60a1 c.37.1.12 (A:329-581) 77.3 0.62 4.5E-05 21.1 2.3 23 481-503 43-65 (253)
175 d2awna2 c.37.1.12 (A:4-235) Ma 77.3 0.25 1.8E-05 24.0 0.2 25 481-505 28-52 (232)
176 d1u94a1 c.37.1.11 (A:6-268) Re 76.9 0.95 6.9E-05 19.8 3.1 25 480-504 55-79 (263)
177 d2pmka1 c.37.1.12 (A:467-707) 76.8 0.66 4.8E-05 21.0 2.3 24 481-504 31-54 (241)
178 d1g2912 c.37.1.12 (1:1-240) Ma 76.8 0.26 1.9E-05 23.8 0.2 24 481-504 31-54 (240)
179 d1puia_ c.37.1.8 (A:) Probable 76.2 0.41 3E-05 22.4 1.1 23 479-501 16-38 (188)
180 d1l2ta_ c.37.1.12 (A:) MJ0796 76.2 0.66 4.8E-05 21.0 2.2 23 481-503 33-55 (230)
181 d1r0wa_ c.37.1.12 (A:) Cystic 75.9 0.86 6.3E-05 20.1 2.7 25 481-505 64-88 (281)
182 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 75.9 0.93 6.8E-05 19.9 2.8 25 480-504 3-27 (200)
183 d3d31a2 c.37.1.12 (A:1-229) Su 75.3 0.73 5.3E-05 20.6 2.2 24 481-504 28-51 (229)
184 d1xjca_ c.37.1.10 (A:) Molybdo 75.1 0.97 7.1E-05 19.8 2.8 23 482-504 4-26 (165)
185 d1ko7a2 c.91.1.2 (A:130-298) H 74.9 1.1 7.9E-05 19.4 3.0 25 479-503 15-39 (169)
186 d1t9ha2 c.37.1.8 (A:68-298) Pr 74.6 0.32 2.3E-05 23.2 0.2 21 481-501 99-119 (231)
187 d1svsa1 c.37.1.8 (A:32-60,A:18 74.6 0.95 6.9E-05 19.8 2.6 23 480-502 3-25 (195)
188 d1jj7a_ c.37.1.12 (A:) Peptide 74.4 0.9 6.5E-05 20.0 2.5 23 481-503 42-64 (251)
189 d2fz4a1 c.37.1.19 (A:24-229) D 74.4 1.8 0.00013 17.9 6.6 25 481-505 87-111 (206)
190 d1v43a3 c.37.1.12 (A:7-245) Hy 73.9 0.34 2.5E-05 23.0 0.2 24 481-504 34-57 (239)
191 d1sgwa_ c.37.1.12 (A:) Putativ 73.8 0.88 6.4E-05 20.1 2.3 25 481-505 29-53 (200)
192 g1f2t.1 c.37.1.12 (A:,B:) Rad5 73.7 1.1 7.9E-05 19.4 2.7 19 483-501 27-45 (292)
193 d1lnza2 c.37.1.8 (A:158-342) O 73.7 0.84 6.1E-05 20.2 2.2 21 481-501 3-23 (185)
194 d1b0ua_ c.37.1.12 (A:) ATP-bin 73.5 0.28 2E-05 23.6 -0.3 25 481-505 30-54 (258)
195 d1vpla_ c.37.1.12 (A:) Putativ 73.5 0.28 2E-05 23.6 -0.3 23 481-503 30-52 (238)
196 d2gmga1 a.4.5.82 (A:1-105) Hyp 73.0 1.1 8E-05 19.4 2.6 28 269-304 67-94 (105)
197 d1xpua3 c.37.1.11 (A:129-417) 72.9 1.9 0.00014 17.7 4.0 23 481-503 45-67 (289)
198 d1mv5a_ c.37.1.12 (A:) Multidr 72.8 0.96 7E-05 19.8 2.3 25 480-504 29-53 (242)
199 d2p67a1 c.37.1.10 (A:1-327) LA 72.7 1.9 0.00014 17.6 6.2 24 480-503 55-78 (327)
200 d1htwa_ c.37.1.18 (A:) Hypothe 72.6 1.9 0.00014 17.6 4.8 25 481-505 35-59 (158)
201 d3dhwc1 c.37.1.12 (C:1-240) Me 72.4 0.82 6E-05 20.3 1.9 23 481-503 33-55 (240)
202 d1knxa2 c.91.1.2 (A:133-309) H 72.1 1.1 7.8E-05 19.5 2.4 24 479-502 15-38 (177)
203 d1cr2a_ c.37.1.11 (A:) Gene 4 71.5 1.8 0.00013 17.9 3.4 22 481-502 37-58 (277)
204 d1p9ra_ c.37.1.11 (A:) Extrace 71.1 2.1 0.00015 17.4 6.1 87 481-568 160-251 (401)
205 d1xzpa2 c.37.1.8 (A:212-371) T 70.3 0.4 2.9E-05 22.5 -0.1 23 480-502 1-23 (160)
206 d1oxxk2 c.37.1.12 (K:1-242) Gl 69.4 1 7.4E-05 19.6 1.8 26 480-505 32-57 (242)
207 d1tq4a_ c.37.1.8 (A:) Interfer 68.8 2.3 0.00017 17.1 7.7 23 480-502 57-79 (400)
208 d1uf9a_ c.37.1.1 (A:) Dephosph 68.2 1.7 0.00012 18.1 2.7 22 481-502 5-26 (191)
209 d1ji0a_ c.37.1.12 (A:) Branche 67.7 0.45 3.3E-05 22.1 -0.3 24 481-504 34-57 (240)
210 d1gsia_ c.37.1.1 (A:) Thymidyl 66.4 2 0.00015 17.5 2.8 23 481-503 2-24 (208)
211 d1g6ha_ c.37.1.12 (A:) MJ1267 65.7 0.55 4E-05 21.5 -0.2 24 481-504 32-55 (254)
212 g1ii8.1 c.37.1.12 (A:,B:) Rad5 65.5 2.3 0.00017 17.2 2.9 23 481-503 25-47 (369)
213 d2qm8a1 c.37.1.10 (A:5-327) Me 65.4 2.7 0.0002 16.6 6.0 23 481-503 53-75 (323)
214 d4tmka_ c.37.1.1 (A:) Thymidyl 65.4 1.9 0.00014 17.8 2.5 23 481-503 4-26 (210)
215 g1xew.1 c.37.1.12 (X:,Y:) Smc 65.1 1.7 0.00012 18.1 2.2 23 482-504 29-51 (329)
216 d2hyda1 c.37.1.12 (A:324-578) 64.9 0.91 6.6E-05 20.0 0.8 20 481-500 46-65 (255)
217 d1n0ua2 c.37.1.8 (A:3-343) Elo 64.7 2.8 0.0002 16.5 6.0 91 481-571 19-149 (341)
218 d1yksa1 c.37.1.14 (A:185-324) 64.2 2.8 0.00021 16.5 8.6 20 477-496 5-24 (140)
219 d1vhta_ c.37.1.1 (A:) Dephosph 64.2 2.6 0.00019 16.8 3.0 22 481-502 5-26 (208)
220 d2ocpa1 c.37.1.1 (A:37-277) De 63.9 2.9 0.00021 16.4 3.8 27 481-507 4-30 (241)
221 d2vp4a1 c.37.1.1 (A:12-208) De 63.5 1.5 0.00011 18.3 1.8 26 480-505 10-35 (197)
222 d1odfa_ c.37.1.6 (A:) Hypothet 63.5 2.9 0.00021 16.4 3.3 24 480-503 28-51 (286)
223 d1l7vc_ c.37.1.12 (C:) ABC tra 63.4 1.6 0.00012 18.2 1.8 26 478-503 24-49 (231)
224 d2c78a3 c.37.1.8 (A:9-212) Elo 62.8 3 0.00022 16.3 5.0 91 479-569 3-118 (204)
225 d1nn5a_ c.37.1.1 (A:) Thymidyl 61.7 2.9 0.00021 16.4 2.9 23 481-503 5-27 (209)
226 d1xp8a1 c.37.1.11 (A:15-282) R 60.0 2.7 0.0002 16.6 2.5 26 480-505 58-83 (268)
227 d1jjva_ c.37.1.1 (A:) Dephosph 58.6 3 0.00021 16.3 2.5 22 481-502 4-25 (205)
228 d1p5zb_ c.37.1.1 (B:) Deoxycyt 55.6 1.9 0.00013 17.8 1.1 25 481-505 4-28 (241)
229 d1puja_ c.37.1.8 (A:) Probable 53.9 4.1 0.0003 15.4 2.6 24 478-501 111-134 (273)
230 d1w1wa_ c.37.1.12 (A:) Smc hea 53.1 4.3 0.00031 15.2 3.2 27 543-569 354-381 (427)
231 d1e69a_ c.37.1.12 (A:) Smc hea 52.8 3 0.00022 16.3 1.8 28 543-570 241-269 (308)
232 d1d2ea3 c.37.1.8 (A:55-250) El 52.7 4.3 0.00032 15.2 3.6 90 479-568 3-116 (196)
233 d1f5na2 c.37.1.8 (A:7-283) Int 51.5 4.5 0.00033 15.0 3.7 22 481-502 34-55 (277)
234 d1rifa_ c.37.1.23 (A:) DNA hel 51.3 4.6 0.00033 15.0 4.4 22 481-502 130-151 (282)
235 d1ni3a1 c.37.1.8 (A:11-306) Yc 51.1 4.6 0.00033 15.0 3.5 27 476-502 7-33 (296)
236 d1mo6a1 c.37.1.11 (A:1-269) Re 50.3 4.7 0.00034 14.9 3.9 24 480-503 61-84 (269)
237 d1deka_ c.37.1.1 (A:) Deoxynuc 50.0 4.8 0.00035 14.9 3.1 23 481-503 3-25 (241)
238 d2p6ra3 c.37.1.19 (A:1-202) He 47.8 5.1 0.00037 14.6 2.9 17 481-497 42-58 (202)
239 d1nija1 c.37.1.10 (A:2-223) Hy 47.6 5.2 0.00038 14.6 4.9 22 482-503 6-27 (222)
240 d1p6xa_ c.37.1.1 (A:) Thymidin 47.5 5.2 0.00038 14.6 2.4 25 481-505 8-32 (333)
241 d1wb9a2 c.37.1.12 (A:567-800) 44.6 5.7 0.00042 14.3 4.9 77 481-557 43-134 (234)
242 d1qhla_ c.37.1.12 (A:) Cell di 44.3 1.7 0.00012 18.1 -0.6 22 482-503 27-48 (222)
243 d1tmka_ c.37.1.1 (A:) Thymidyl 43.1 6 0.00044 14.1 3.1 25 481-505 5-29 (214)
244 d1osna_ c.37.1.1 (A:) Thymidin 39.8 6.7 0.00049 13.8 1.9 25 481-505 7-31 (331)
245 d1a7ja_ c.37.1.6 (A:) Phosphor 38.4 4.2 0.0003 15.3 0.6 25 481-505 6-30 (288)
246 d1gm5a3 c.37.1.19 (A:286-549) 35.9 7.7 0.00056 13.4 6.2 23 481-503 106-128 (264)
247 d1e2ka_ c.37.1.1 (A:) Thymidin 34.5 7.4 0.00054 13.5 1.4 24 481-504 6-29 (329)
248 d1wxqa1 c.37.1.8 (A:1-319) GTP 34.5 8.1 0.00059 13.2 2.5 23 481-503 2-24 (319)
249 d2jdid3 c.37.1.11 (D:82-357) C 34.1 8.2 0.0006 13.2 3.4 23 481-503 70-92 (276)
250 d1gkub1 c.37.1.16 (B:1-250) He 31.7 8.9 0.00065 12.9 2.1 20 481-500 60-79 (237)
251 d2bmfa2 c.37.1.14 (A:178-482) 31.1 9.2 0.00067 12.9 6.1 19 476-494 6-24 (305)
252 d1wp9a1 c.37.1.19 (A:1-200) pu 25.6 11 0.00082 12.2 4.6 21 481-501 25-45 (200)
253 d1oywa2 c.37.1.19 (A:1-206) Re 24.5 12 0.00086 12.1 3.4 22 481-502 42-63 (206)
254 d1ihua1 c.37.1.10 (A:1-296) Ar 20.9 14 0.001 11.6 2.8 25 481-505 10-34 (296)
255 d1ewqa2 c.37.1.12 (A:542-765) 20.3 14 0.001 11.5 7.4 78 481-558 37-129 (224)
No 1
>d1ltla_ b.40.4.11 (A:) DNA replication initiator (cdc21/cdc54) N-terminal domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=100.00 E-value=2.4e-44 Score=328.55 Aligned_cols=232 Identities=26% Similarity=0.438 Sum_probs=202.7
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCEEEEECHHHHCCCHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 9999999753100000058842210011499999999870--79499993303611287999999869799999999999
Q 003637 132 SAIQMFLKHFREKEELLSGSESEIYKEGKYMRAINRVLEI--EGEWIDVDANDVFDYDSDLYNKMVRYPLEVLAIFDIVL 209 (806)
Q Consensus 132 ~~f~~FL~~F~~~~~~~~~~~~~~~~~~~Y~~~i~~~~~~--~~~~l~Id~~dL~~fd~~La~~l~~~P~~~l~~~~~ai 209 (806)
+.+..|.+.|.. ..|.++|.+++.. +..+|.|||.||..|+|+|+.+|+++|.+++++|+.|+
T Consensus 5 ~~l~~f~e~~~~---------------~~y~~~i~~~~~~~~~~~sl~Vd~~~L~~~~~~L~~~l~~~P~~~l~~~~~ai 69 (239)
T d1ltla_ 5 KTLTKFEEFFSL---------------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAI 69 (239)
T ss_dssp HHHHHHHHHTTS---------------HHHHHHHHHHHHHTTSCCEEEEEHHHHHHHCTTHHHHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCH---------------HHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCHHHHHHHHHCHHHHHHHHHHHH
T ss_conf 999999998362---------------76899999999718987099997999874699999999989899999999998
Q ss_pred HHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCEEECCCCC
Q ss_conf 99999627656772899994168855777889358793699998999725663057878998234576678647517865
Q 003637 210 MDIVSLINPLFEKHVQVRIYNLKSSTAMRNLNPSDIEKMVSLKGMVIRCSSIIPEIREAIFRCLVCGYYSDPIVVDRGRI 289 (806)
Q Consensus 210 ~e~~~~~~~~~~~~i~vr~~nl~~~~~iR~L~~~~igkLV~i~GiV~r~S~v~p~l~~a~f~C~~C~~~~~~~~~~~~~~ 289 (806)
+++... .....+++|+.|+|...++|+|++.++||||+|+|+|+|+|.|+|+++.++|.|..|++... +.++.+.+
T Consensus 70 ~~~~~~---~~~~~i~vr~~~~~~~~~ir~l~s~~igkLv~v~GiV~r~s~v~~~~~~~~~~C~~C~~~~~-~~~~~~~~ 145 (239)
T d1ltla_ 70 RNIDRL---RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHA-VTQSTNMI 145 (239)
T ss_dssp TTTCTT---CCCCCCEEEEECCSCBCCGGGCCGGGTTSEEEEEEEEEEECCCEEEEEEEEEEETTTCCEEE-EECSSSSC
T ss_pred HHHHHH---CCCCEEEEEECCCCCCCCHHCCCHHHHCCEEEEEEEEEEECCEEEEEEEEEEECCCCCCEEE-EEECCCEE
T ss_conf 767752---35734999980798765620035001103999989999937777799999999888885699-97169715
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEC
Q ss_conf 69866686223899942673164210003689985189999999997299999444433567999889999999953202
Q 003637 290 NEPSTCLKQECLAKNSMTLVHNRCRFADKQIVRLQETPDDIPDGGTPHTVSLLMHDKLVDAGKPGDRVEVTGIYRAMSVR 369 (806)
Q Consensus 290 ~~P~~C~~~~C~~~~~~~l~~~~s~f~d~Q~IkiQE~p~~~p~G~~Prsi~V~l~~dLvd~~~pGd~V~VtGIl~~~~~~ 369 (806)
.+|..|++ |+++ +|.++.+.|.|+|||+|+|||.|+++|.|++||+++|+|++||||+++|||+|.|+|||++.+..
T Consensus 146 ~~p~~C~~--C~~~-~f~~~~~~s~~~d~Q~i~iQE~~e~~~~G~~Pr~i~v~l~~dlvd~~~pGd~V~i~GI~~~~~~~ 222 (239)
T d1ltla_ 146 TEPSLCSE--CGGR-SFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDE 222 (239)
T ss_dssp CCCSCCTT--TCCC-CEEECGGGCEEEEEEEEEEECCSTTCCSSCCCCEEEEEEEGGGTTCCCTTCEEEEEEEEEEEEET
T ss_pred CCCCCCCC--CCCC-CCEECCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEEEECC
T ss_conf 37755777--7996-51871374337662899974042447889999679999960302865899999999999876569
Q ss_pred CCCCCCCCCCEEEEEEEEEEEEE
Q ss_conf 38874444420468899987897
Q 003637 370 VGPTQRTVKSLFKTYIDCLHIKK 392 (806)
Q Consensus 370 ~~~~~~~~~~~~~~yi~a~~i~~ 392 (806)
....++.||.|++|+.
T Consensus 223 -------~~~~~~~~i~a~~Ie~ 238 (239)
T d1ltla_ 223 -------RTKRFKNFIYGNYTEF 238 (239)
T ss_dssp -------TTTEEEEEEEEEECCB
T ss_pred -------CCCCEEEEEEEEEEEE
T ss_conf -------9983279999999997
No 2
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=100.00 E-value=1.7e-32 Score=244.65 Aligned_cols=265 Identities=20% Similarity=0.232 Sum_probs=189.4
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCC-----------
Q ss_conf 563355046688775310179533489997545664259987899949999999999789970016997-----------
Q 003637 445 APNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKG----------- 513 (806)
Q Consensus 445 ~P~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~----------- 513 (806)
+..|+|++.+|++++++++.. +..||||+|+||||||++++.++.++|......+..
T Consensus 6 f~~I~Gq~~~kral~laa~~~------------~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~~~~~ 73 (333)
T d1g8pa_ 6 FSAIVGQEDMKLALLLTAVDP------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPD 73 (333)
T ss_dssp GGGSCSCHHHHHHHHHHHHCG------------GGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGGGSCT
T ss_pred HHHCCCCHHHHHHHHHHHHCC------------CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCC
T ss_conf 514069499999999997646------------99708998899852999999998737982154057534675344620
Q ss_pred ----------------------CCCCCCEEEE--ECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf ----------------------3100541445--3188887310034520125773122121113899999999998862
Q 003637 514 ----------------------SSAVGLTAYV--TKDPETGETVLESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQ 569 (806)
Q Consensus 514 ----------------------~~~~gLta~~--~kd~~~ge~~le~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~ 569 (806)
.+..++.... .+....|++..++|.+.+|++||+||||++++++..+++|+++||+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~~~~~~~~aLl~~me~ 153 (333)
T d1g8pa_ 74 WATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQS 153 (333)
T ss_dssp TCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHHTTEEEEETTGGGSCHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf 22012457521237524236778854355741021102368602202531135563763153777779999987445307
Q ss_pred CEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 47897003435630673179970289998788777500011389622692014555406799689999999999863049
Q 003637 570 QTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFEN 649 (806)
Q Consensus 570 q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~ 649 (806)
+.++|+++|...+++++|.++||+||.+++ +++++++|||+.+.+.+..+.+....+..+........
T Consensus 154 ~~v~i~r~g~~~~~p~~f~liaa~Np~~~~------------l~~~llDRf~~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 221 (333)
T d1g8pa_ 154 GENVVERDGLSIRHPARFVLVGSGNPEEGD------------LRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADP 221 (333)
T ss_dssp SEEEECCTTCCEEEECCEEEEEEECSCSCC------------CCHHHHTTCSEEEECCCCCSHHHHHHHHHHHHHHHHCH
T ss_pred CEEEECCCCCEECCCCCEEEEEECCCCCCC------------CCCCHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCH
T ss_conf 768751358430488887999845763123------------66310324133443268640357888777654102275
Q ss_pred CCCCCCCCCCHHHHHHHH-HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 998657889999999999-9999608999999999999999999883499999998623359999999999999999973
Q 003637 650 PENSEQGVLDLATLTAYV-SYARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIR 728 (806)
Q Consensus 650 ~~~~~~~~i~~~~lk~yi-~~ar~~~~p~ls~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~ 728 (806)
.............+++.+ ..........++++....+...+..++. .+.|....++|+|.++|.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~-------------~S~R~~~~llrvArtiA~L~ 288 (333)
T d1g8pa_ 222 KAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS-------------DGLRGELTLLRSARALAALE 288 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHSSS-------------CSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCC-------------CCHHHHHHHHHHHHHHHHHC
T ss_conf 77888889999999988888752113120589999999999997089-------------88379999999999999976
Q ss_pred CCCCCCHHHHHHHHHHHH
Q ss_conf 699789765999999999
Q 003637 729 LSELVEKHDVEEAFRLLE 746 (806)
Q Consensus 729 l~~~V~~~Dv~~ai~l~~ 746 (806)
+++.|+.+|+.+|+.+.-
T Consensus 289 gr~~V~~~di~~a~~lvL 306 (333)
T d1g8pa_ 289 GATAVGRDHLKRVATMAL 306 (333)
T ss_dssp TCSBCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
T ss_conf 989989999999999987
No 3
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.78 E-value=3.6e-18 Score=143.22 Aligned_cols=200 Identities=25% Similarity=0.385 Sum_probs=143.0
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEE-----------ECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 42599878999499999999997899700169973100541445-----------3188887310034520125773122
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYV-----------TKDPETGETVLESGALVLSDRGICC 548 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~-----------~kd~~~ge~~le~Gal~lad~GIl~ 548 (806)
.|||+.|++||||+.+|+++|..+++. ...+....+.... .++..++......|.+..+++|++|
T Consensus 24 ~pvlI~Ge~GtGK~~~A~~ih~~s~~~----~~~~~~~~~~~~~~~~~~~~lfg~~~~~~~~~~~~~~g~l~~a~gGtL~ 99 (247)
T d1ny5a2 24 CPVLITGESGVGKEVVARLIHKLSDRS----KEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLF 99 (247)
T ss_dssp SCEEEECSTTSSHHHHHHHHHHHSTTT----TSCEEEEETTTSCHHHHHHHHHCBCTTSSTTCCSCBCCHHHHTTTSEEE
T ss_pred CCEEEECCCCCCHHHHHHHHHHHCCCC----CCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEE
T ss_conf 978998999817999999999965876----5332021023431011288762853577677533558887723899799
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCC------CCCCCC----CCCCCCCCCCCCCCCC
Q ss_conf 121113899999999998862478970034356306731799702899------987887----7750001138962269
Q 003637 549 IDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPS------GSRYNP----RLSVIENIHLPPTLLS 618 (806)
Q Consensus 549 IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~------~g~~~~----~~~~~~~i~lp~~lls 618 (806)
|||+|.++...|..|..+++++.+. +.|.......++++|++++.. .+.|+. +++.. .+.+||...+
T Consensus 100 l~~i~~L~~~~Q~~L~~~l~~~~~~--~~~~~~~~~~~~RlI~~s~~~l~~l~~~~~f~~~L~~~l~~~-~i~lPpLreR 176 (247)
T d1ny5a2 100 LDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRLGVI-EIEIPPLRER 176 (247)
T ss_dssp EESGGGCCHHHHHHHHHHHHHSEEC--CBTCCSBEECCCEEEEEESSCHHHHHHTTSSCHHHHHHHTTE-EEECCCGGGC
T ss_pred EECHHHCCHHHHHHHHHHHHHCCEE--ECCCCCCEECCEEEEEECCCCHHHHHHCCCCCHHHHHHCCEE-EECCCCHHHC
T ss_conf 9583759999999999999759878--789997023375999933979999988599748888640810-6558970116
Q ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 20145554067996899999999998630499986578899999999999999608--9999999999999999998834
Q 003637 619 RFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHI--HPKLSDEAAEELTRGYVEMRRR 696 (806)
Q Consensus 619 RFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~--~p~ls~ea~~~L~~~y~~lR~~ 696 (806)
+-|+. .|+.+++... +.+.- .+.++++|.+.|..+
T Consensus 177 ~~Di~-------------~l~~~~l~~~-----------------------~~~~~~~~~~ls~~al~~L~~~------- 213 (247)
T d1ny5a2 177 KEDII-------------PLANHFLKKF-----------------------SRKYAKEVEGFTKSAQELLLSY------- 213 (247)
T ss_dssp HHHHH-------------HHHHHHHHHH-----------------------HHHTTCCCCEECHHHHHHHHHS-------
T ss_pred HHHHH-------------HHHHHHHHHH-----------------------HHHCCCCCCCCCHHHHHHHHHC-------
T ss_conf 24576-------------6400134334-----------------------6650787788899999999848-------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 999999986233599999999999999999736997897659999
Q 003637 697 GNFPGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEA 741 (806)
Q Consensus 697 ~~~~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~a 741 (806)
.|||| +|+|+++++.+.+.+. .+.|+.+|+...
T Consensus 214 -~WPGN--------l~EL~~~l~~a~~~~~---~~~I~~~dl~~l 246 (247)
T d1ny5a2 214 -PWYGN--------VRELKNVIERAVLFSE---GKFIDRGELSCL 246 (247)
T ss_dssp -CCTTH--------HHHHHHHHHHHHHHCC---SSEECHHHHHHH
T ss_pred -CCCCH--------HHHHHHHHHHHHHHCC---CCEECHHHCCCC
T ss_conf -99989--------9999999999998189---885887980021
No 4
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.69 E-value=7.1e-15 Score=119.88 Aligned_cols=220 Identities=25% Similarity=0.263 Sum_probs=139.0
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEC-CCCCCCCCCCEEEEEC
Q ss_conf 335504668877531017953348999754566425998789994999999999978997001-6997310054144531
Q 003637 447 NIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYT-SGKGSSAVGLTAYVTK 525 (806)
Q Consensus 447 ~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~t-sg~~~~~~gLta~~~k 525 (806)
.++|++++|+.+.-.+-....+.. .--|+||+||||||||++++.+++.+...... ++......
T Consensus 10 divGq~~~~~~L~~~i~~~~~~~~-------~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~-------- 74 (239)
T d1ixsb2 10 EYIGQERLKQKLRVYLEAAKARKE-------PLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP-------- 74 (239)
T ss_dssp GSCSCHHHHHHHHHHHHHHTTSSS-------CCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSH--------
T ss_pred HHCCHHHHHHHHHHHHHHHHHCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCC--------
T ss_conf 948989999999999997873588-------88738988979987888999999984987475468753432--------
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEE-----CCEEEEECCCEEEEEECCCCCCCC
Q ss_conf 888873100345201257731221211138999999999988624789700-----343563067317997028999878
Q 003637 526 DPETGETVLESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAK-----AGIIASLNARTSVLACANPSGSRY 600 (806)
Q Consensus 526 d~~~ge~~le~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~k-----ag~~~~l~~r~siIaaaNp~~g~~ 600 (806)
+.+... ..-....+.+++|||+++++...+..++.+||...+.... +.....-+.++.+++++|...
T Consensus 75 ----~~~~~~-~~~~~~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--- 146 (239)
T d1ixsb2 75 ----GDLAAI-LANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPG--- 146 (239)
T ss_dssp ----HHHHHH-HHTTCCTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESCCS---
T ss_pred ----HHHHHH-HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEECCCCC---
T ss_conf ----146899-885103887344311001104478750012433321211046556543346899779996306833---
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 87775000113896226920145554067996899999999998630499986578899999999999999608999999
Q 003637 601 NPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPKLSD 680 (806)
Q Consensus 601 ~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ 680 (806)
...++.++|+... ..+..++ .+.+.+++..........+++
T Consensus 147 ----------~~~~~~l~~~~~~-~~~~~~~----------------------------~~~~~~i~~~~~~~~~i~~~~ 187 (239)
T d1ixsb2 147 ----------LITAPLLSRFGIV-EHLEYYT----------------------------PEELAQGVMRDARLLGVRITE 187 (239)
T ss_dssp ----------SCSCGGGGGCSEE-EECCCCC----------------------------HHHHHHHHHHHHGGGCCCBCH
T ss_pred ----------CCCCHHHCCCCEE-EEEECCC----------------------------HHHHHHHHHHHHHHHCCCCCH
T ss_conf ----------3441010122145-6752057----------------------------455557889999984876526
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 99999999999988349999999862335999999999999999997369978976599999999
Q 003637 681 EAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEAFRLL 745 (806)
Q Consensus 681 ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~ai~l~ 745 (806)
++.+.+.+.. . -.+|...++++.+...|.....+.|+.+++.+++..+
T Consensus 188 ~~l~~ia~~s---------~--------gd~R~a~~~l~~~~~~a~~~~~~~It~~~~~~~l~~l 235 (239)
T d1ixsb2 188 EAALEIGRRS---------R--------GTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAAL 235 (239)
T ss_dssp HHHHHHHHHT---------T--------SSHHHHHHHHHHHHHHHTTSCCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHC---------C--------CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 7899999976---------9--------9999999999999999898579973899999998636
No 5
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.68 E-value=2.6e-15 Score=123.02 Aligned_cols=219 Identities=20% Similarity=0.213 Sum_probs=139.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECC
Q ss_conf 33550466887753101795334899975456642599878999499999999997899700169973100541445318
Q 003637 447 NIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKD 526 (806)
Q Consensus 447 ~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd 526 (806)
.|+|++++|+.+--.+-....+.. ...|+||+||||||||++|+.+++.+....+... +..
T Consensus 10 divGqe~~~~~l~~~i~~~~~~~~-------~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~---------~~~--- 70 (238)
T d1in4a2 10 EFIGQENVKKKLSLALEAAKMRGE-------VLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTS---------GPV--- 70 (238)
T ss_dssp GCCSCHHHHHHHHHHHHHHHHHTC-------CCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEE---------TTT---
T ss_pred HCCCHHHHHHHHHHHHHHHHHCCC-------CCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC---------CCC---
T ss_conf 908959999999999997885388-------7774898799997388999999850388853325---------744---
Q ss_pred CCCCCCCCCCCCC-CCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEE--ECC---EEEEECCCEEEEEECCCCCCCC
Q ss_conf 8887310034520-125773122121113899999999998862478970--034---3563067317997028999878
Q 003637 527 PETGETVLESGAL-VLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIA--KAG---IIASLNARTSVLACANPSGSRY 600 (806)
Q Consensus 527 ~~~ge~~le~Gal-~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~--kag---~~~~l~~r~siIaaaNp~~g~~ 600 (806)
..........+ ....+.+++|||++++....+..+...|+...+... ... .......++.+|+++|.
T Consensus 71 --~~~~~~~~~~~~~~~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~----- 143 (238)
T d1in4a2 71 --LVKQGDMAAILTSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTR----- 143 (238)
T ss_dssp --CCSHHHHHHHHHHCCTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEEEEEESC-----
T ss_pred --CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCC-----
T ss_conf --2248889999875435882477789884067776421402441454454376002444457887699995478-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 87775000113896226920145554067996899999999998630499986578899999999999999608999999
Q 003637 601 NPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPKLSD 680 (806)
Q Consensus 601 ~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ 680 (806)
...+++++++||+.++ . ....+.+.+..++..........+++
T Consensus 144 --------~~~~~~~~~~r~~~~~-~----------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~ 186 (238)
T d1in4a2 144 --------SGLLSSPLRSRFGIIL-E----------------------------LDFYTVKELKEIIKRAASLMDVEIED 186 (238)
T ss_dssp --------GGGSCHHHHTTCSEEE-E----------------------------CCCCCHHHHHHHHHHHHHHTTCCBCH
T ss_pred --------CCCCCCCCEEEEEEEE-E----------------------------ECCCCHHHHHHHHHHHHHHCCCHHHH
T ss_conf --------7555543113300799-8----------------------------44787787777777765301100257
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 99999999999988349999999862335999999999999999997369978976599999999
Q 003637 681 EAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEAFRLL 745 (806)
Q Consensus 681 ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~ai~l~ 745 (806)
++.+.+.+.. . -+.|...++++.+...|.....+.|+.+++.+++..+
T Consensus 187 ~~l~~i~~~s---------~--------gd~R~ai~~l~~~~~~~~~~~~~~it~~~~~~al~~l 234 (238)
T d1in4a2 187 AAAEMIAKRS---------R--------GTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVL 234 (238)
T ss_dssp HHHHHHHHTS---------T--------TCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHC---------C--------CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 9999999967---------9--------9899999999999999998569962899999998865
No 6
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.61 E-value=1.2e-13 Score=111.10 Aligned_cols=234 Identities=17% Similarity=0.216 Sum_probs=144.0
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCC
Q ss_conf 999998215633550466887753101---79533489997545664259987899949999999999789970016997
Q 003637 437 YETLTRSLAPNIWELDDVKKGLLCQLF---GGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKG 513 (806)
Q Consensus 437 ~~~l~~sl~P~I~G~e~vK~~ill~L~---gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~ 513 (806)
+..|.+.|.-.|+|++++++.++..+. .+.. .. .+...++||+||||+|||.+++.+++.+...
T Consensus 13 l~~l~~~L~~~viGQ~~a~~~v~~~v~~~~~~l~----~~--~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~------- 79 (315)
T d1r6bx3 13 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG----HE--HKPVGSFLFAGPTGVGKTEVTVQLSKALGIE------- 79 (315)
T ss_dssp HHHHHHHHTTTSCSCHHHHHHHHHHHHHHHTTCS----CT--TSCSEEEEEECSTTSSHHHHHHHHHHHHTCE-------
T ss_pred HHHHHHHHCCEECCHHHHHHHHHHHHHHHHCCCC----CC--CCCCEEEEEECCCCCHHHHHHHHHHHHCCCC-------
T ss_conf 9999998588064859999999999999972678----88--8876589997787500699999998633677-------
Q ss_pred CCCCCCEEEEECCC---CCCC---CC------CCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEE
Q ss_conf 31005414453188---8873---10------034520125773122121113899999999998862478970034356
Q 003637 514 SSAVGLTAYVTKDP---ETGE---TV------LESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIA 581 (806)
Q Consensus 514 ~~~~gLta~~~kd~---~~ge---~~------le~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~ 581 (806)
+..++++.....+. ..|. +. .-.+.+.....+++++||+||+.++.++.|+++++++.++-. .|...
T Consensus 80 ~i~~d~s~~~~~~~~~~l~g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~-~Gr~v 158 (315)
T d1r6bx3 80 LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN-NGRKA 158 (315)
T ss_dssp EEEEEGGGCSSSSCCSSSCCCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGGSCHHHHHHHHHHHHHSEEEET-TTEEE
T ss_pred EEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHCCCEECCC-CCCCC
T ss_conf 06741544455446665214678750114687033777738543022122230163376656776214602588-99726
Q ss_pred EECCCEEEEEECCCCCCCC---------CCCC-CCCC--CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 3067317997028999878---------8777-5000--11389622692014555406799689999999999863049
Q 003637 582 SLNARTSVLACANPSGSRY---------NPRL-SVIE--NIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFEN 649 (806)
Q Consensus 582 ~l~~r~siIaaaNp~~g~~---------~~~~-~~~~--~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~ 649 (806)
-...+.+++++|-..... .... ...+ .-.++|.+++|+|.+ +.+...+.+.-..|+...+..
T Consensus 159 -df~n~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~i-i~f~~l~~~~~~~I~~~~l~~---- 232 (315)
T d1r6bx3 159 -DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI-IWFDHLSTDVIHQVVDKFIVE---- 232 (315)
T ss_dssp -ECTTEEEEEEECSSCC-----------------CHHHHHHHSCHHHHTTCSEE-EECCCCCHHHHHHHHHHHHHH----
T ss_pred -CCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHH----
T ss_conf -86325888414401688886200000566667689999975489898663210-013630155899999999999----
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 9986578899999999999999608999999999999999999883499999998623359999999999
Q 003637 650 PENSEQGVLDLATLTAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIR 719 (806)
Q Consensus 650 ~~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslir 719 (806)
+.+ .+..+.+...+++++.++|.+.... + ...+|.|+.+|+
T Consensus 233 -------------~~~--~l~~~~i~l~~~~~a~~~l~~~~yd-------~-------~~GaR~L~r~Ie 273 (315)
T d1r6bx3 233 -------------LQV--QLDQKGVSLEVSQEARNWLAEKGYD-------R-------AMGARPMARVIQ 273 (315)
T ss_dssp -------------HHH--HHHHTTEEEEECHHHHHHHHHHHCB-------T-------TTBTTTHHHHHH
T ss_pred -------------HHH--HHHHCCCCHHHHHHHHHHHHHHCCC-------C-------CCCHHHHHHHHH
T ss_conf -------------999--9876486220279999999996789-------7-------778416999999
No 7
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.56 E-value=3.5e-14 Score=115.00 Aligned_cols=217 Identities=20% Similarity=0.229 Sum_probs=126.8
Q ss_pred CCCCHHHHHHHHH--HHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEE
Q ss_conf 3355046688775--31017953348999754566425998789994999999999978997001699731005414453
Q 003637 447 NIWELDDVKKGLL--CQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVT 524 (806)
Q Consensus 447 ~I~G~e~vK~~il--l~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~ 524 (806)
.|.|++++|+.|. ..++.........|.. ..-++||+||||||||.+++++++.+...++. +.+.....
T Consensus 13 Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~--~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~-------i~~~~l~~ 83 (256)
T d1lv7a_ 13 DVAGCDEAKEEVAELVEYLREPSRFQKLGGK--IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFT-------ISGSDFVE 83 (256)
T ss_dssp GSCSCHHHHHHTHHHHHHHHCGGGC-----C--CCCEEEEECCTTSCHHHHHHHHHHHHTCCEEE-------ECSCSSTT
T ss_pred HHHCHHHHHHHHHHHHHHHHCHHHHHHCCCC--CCCEEEEECCCCCCCCHHHHHHHHHCCCCEEE-------EEHHHHHH
T ss_conf 9816399999999999998799999986999--88867866899888228999999982998799-------88699426
Q ss_pred CCCCCCC--CCCCCCCCCCC---CCCEEECCCCCCCCH-----------H---HHHHHHHHHHHCEEEEEECCEEEEECC
Q ss_conf 1888873--10034520125---773122121113899-----------9---999999988624789700343563067
Q 003637 525 KDPETGE--TVLESGALVLS---DRGICCIDEFDKMSE-----------S---ARSMLHEVMEQQTVSIAKAGIIASLNA 585 (806)
Q Consensus 525 kd~~~ge--~~le~Gal~la---d~GIl~IDEidkl~~-----------~---~q~~L~e~mE~q~isi~kag~~~~l~~ 585 (806)
...|+ ..+.. .+..| ...|++|||+|.+.. . ..+.|+..|+.- .-+.
T Consensus 84 --~~~g~~~~~l~~-~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~-----------~~~~ 149 (256)
T d1lv7a_ 84 --MFVGVGASRVRD-MFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGF-----------EGNE 149 (256)
T ss_dssp --SCCCCCHHHHHH-HHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTC-----------CSSS
T ss_pred --CCHHHHHHHHHH-HHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-----------CCCC
T ss_conf --001078999999-99999975998999977566575678988887489999999999995387-----------7779
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
Q ss_conf 317997028999878877750001138962269--201455540679968999999999986304999865788999999
Q 003637 586 RTSVLACANPSGSRYNPRLSVIENIHLPPTLLS--RFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATL 663 (806)
Q Consensus 586 r~siIaaaNp~~g~~~~~~~~~~~i~lp~~lls--RFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~l 663 (806)
++.+|||+|. .-.+++++++ |||-. +.++.|+.+....|.++.+....
T Consensus 150 ~v~vIatTn~-------------~~~ld~al~R~gRfd~~-i~i~~P~~~~R~~il~~~l~~~~---------------- 199 (256)
T d1lv7a_ 150 GIIVIAATNR-------------PDVLDPALLRPGRFDRQ-VVVGLPDVRGREQILKVHMRRVP---------------- 199 (256)
T ss_dssp CEEEEEEESC-------------TTTSCGGGGSTTSSCEE-EECCCCCHHHHHHHHHHHHTTSC----------------
T ss_pred CEEEEEECCC-------------CCCCCHHHCCCCCCCEE-EECCCCCHHHHHHHHHHHCCCCC----------------
T ss_conf 9899980799-------------31079857689878779-87799599999999998425998----------------
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 99999999608999999999999999999883499999998623359999999999999999973699789765999999
Q 003637 664 TAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEAFR 743 (806)
Q Consensus 664 k~yi~~ar~~~~p~ls~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~ai~ 743 (806)
..+.+ ..+.|.+. . .+++.+.+.++++.|...|..+.+..|+.+|+..|++
T Consensus 200 ----------~~~~~---~~~~la~~---------t-------~G~s~adi~~l~~~A~~~a~~~~~~~i~~~d~~~Al~ 250 (256)
T d1lv7a_ 200 ----------LAPDI---DAAIIARG---------T-------PGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKD 250 (256)
T ss_dssp ----------BCTTC---CHHHHHHT---------C-------TTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHH
T ss_pred ----------CCCCC---CHHHHHHH---------C-------CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf ----------68656---99999986---------8-------9989999999999999999982898348999999999
Q ss_pred HH
Q ss_conf 99
Q 003637 744 LL 745 (806)
Q Consensus 744 l~ 745 (806)
-+
T Consensus 251 rv 252 (256)
T d1lv7a_ 251 KI 252 (256)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 8
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.56 E-value=4.8e-15 Score=121.06 Aligned_cols=182 Identities=21% Similarity=0.237 Sum_probs=114.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCCC--CCCCCCCCCC---CCCCEEECCCCCCC
Q ss_conf 259987899949999999999789970016997310054144531888873--1003452012---57731221211138
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKDPETGE--TVLESGALVL---SDRGICCIDEFDKM 555 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd~~~ge--~~le~Gal~l---ad~GIl~IDEidkl 555 (806)
+|||+||||||||.+++++++.+...++ .+.++....+ ..|+ ..+.. .+.. ....|++|||+|.+
T Consensus 44 giLl~GppGtGKT~la~aia~~~~~~~~-------~i~~~~l~~~--~~g~~~~~l~~-~f~~a~~~~p~Ii~iDeid~l 113 (247)
T d1ixza_ 44 GVLLVGPPGVGKTHLARAVAGEARVPFI-------TASGSDFVEM--FVGVGAARVRD-LFETAKRHAPCIVFIDEIDAV 113 (247)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHTTCCEE-------EEEHHHHHHS--CTTHHHHHHHH-HHHHHTTSSSEEEEEETHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEE-------EEEHHHHHHC--CCCHHHHHHHH-HHHHHHHCCCEEEEEECHHHH
T ss_conf 4887668988835999999987399779-------9786996462--45389999999-999999769979999773664
Q ss_pred CH-----------H---HHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC--CC
Q ss_conf 99-----------9---99999998862478970034356306731799702899987887775000113896226--92
Q 003637 556 SE-----------S---ARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLL--SR 619 (806)
Q Consensus 556 ~~-----------~---~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~ll--sR 619 (806)
.. . ..+.|+..|+.- .-+.++.+|||+|- .-.++++++ +|
T Consensus 114 ~~~r~~~~~~~~~~~~~~~~~ll~~~d~~-----------~~~~~vivi~tTn~-------------~~~ld~al~R~~R 169 (247)
T d1ixza_ 114 GRKRGSGVGGGNDEREQTLNQLLVEMDGF-----------EKDTAIVVMAATNR-------------PDILDPALLRPGR 169 (247)
T ss_dssp HC---------CHHHHHHHHHHHHHHHTC-----------CTTCCEEEEEEESC-------------GGGSCGGGGSTTS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCC-----------CCCCCEEEEEECCC-------------CCCCCHHHCCCCC
T ss_conf 74678998887589999999999996387-----------77899899980799-------------4006996758987
Q ss_pred CHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 01455540679968999999999986304999865788999999999999996089999999999999999998834999
Q 003637 620 FDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRGNF 699 (806)
Q Consensus 620 FDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ea~~~L~~~y~~lR~~~~~ 699 (806)
||.. +.++.|+.+....|.++++.... . ..+...+.|.+. .
T Consensus 170 f~~~-i~~~~P~~~eR~~il~~~l~~~~--------------------------~---~~~~~~~~la~~---------t 210 (247)
T d1ixza_ 170 FDRQ-IAIDAPDVKGREQILRIHARGKP--------------------------L---AEDVDLALLAKR---------T 210 (247)
T ss_dssp SCEE-EECCSCCHHHHHHHHHHHHTTSC--------------------------B---CTTCCHHHHHHT---------C
T ss_pred CCEE-EEECCCCHHHHHHHHHHHHCCCC--------------------------C---CCCCCHHHHHHH---------C
T ss_conf 8579-99799699999999998750657--------------------------7---654689999977---------8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 9999862335999999999999999997369978976599999
Q 003637 700 PGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEAF 742 (806)
Q Consensus 700 ~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~ai 742 (806)
.+.|.+.+.++++.|...|..+..+.|+.+|+.+|+
T Consensus 211 -------~g~s~~di~~lv~~A~l~a~~~~~~~i~~~d~~~A~ 246 (247)
T d1ixza_ 211 -------PGFVGADLENLLNEAALLAAREGRRKITMKDLEEAA 246 (247)
T ss_dssp -------TTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHT
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf -------898899999999999999998688874999999864
No 9
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.55 E-value=1.5e-13 Score=110.60 Aligned_cols=207 Identities=19% Similarity=0.163 Sum_probs=128.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCC----------
Q ss_conf 3355046688775310179533489997545664259987899949999999999789970016997310----------
Q 003637 447 NIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSA---------- 516 (806)
Q Consensus 447 ~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~---------- 516 (806)
.++|++.++..+.-.+..+. .+ .++||+||||+|||++++.+++.+.............
T Consensus 13 dlig~~~~~~~L~~~i~~~~---~~--------~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 81 (239)
T d1njfa_ 13 DVVGQEHVLTALANGLSLGR---IH--------HAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQG 81 (239)
T ss_dssp GSCSCHHHHHHHHHHHHTTC---CC--------SEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHT
T ss_pred HCCCHHHHHHHHHHHHHCCC---CC--------EEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 81595999999999998599---87--------05988889987589999999998468556666755542479999747
Q ss_pred --CCCEEEEECCCCCCC----CCCCCCCCCC--CCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEE
Q ss_conf --054144531888873----1003452012--57731221211138999999999988624789700343563067317
Q 003637 517 --VGLTAYVTKDPETGE----TVLESGALVL--SDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASLNARTS 588 (806)
Q Consensus 517 --~gLta~~~kd~~~ge----~~le~Gal~l--ad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~s 588 (806)
..+......+ ..+. ..++...... ....+++|||+|.|+...|++|+..||+. +..+.
T Consensus 82 ~~~~~~~~~~~~-~~~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l~~~~q~~Llk~lE~~-------------~~~~~ 147 (239)
T d1njfa_ 82 RFVDLIEIDAAS-RTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-------------PEHVK 147 (239)
T ss_dssp CCTTEEEEETTC-SSSHHHHHHHHHSCCCSCSSSSSEEEEEETGGGSCHHHHHHHHHHHHSC-------------CTTEE
T ss_pred CCCEEEEECCHH-CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC-------------CCCEE
T ss_conf 987079961120-0789999999999974652599879999781108999999999998568-------------98869
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99702899987887775000113896226920145554067996899999999998630499986578899999999999
Q 003637 589 VLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVS 668 (806)
Q Consensus 589 iIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~ 668 (806)
+|.++|. .-.+.+++.|||..+ ....++.+.+++++.
T Consensus 148 ~il~tn~-------------~~~i~~~i~SRc~~i------------------------------~~~~~~~~~i~~~l~ 184 (239)
T d1njfa_ 148 FLLATTD-------------PQKLPVTILSRCLQF------------------------------HLKALDVEQIRHQLE 184 (239)
T ss_dssp EEEEESC-------------GGGSCHHHHTTSEEE------------------------------ECCCCCHHHHHHHHH
T ss_pred EEEECCC-------------CCCCCHHHHHHHCCC------------------------------CCCCCCHHHHHHHHH
T ss_conf 9997388-------------563676576121022------------------------------224676787666887
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 99960899999999999999999988349999999862335999999999999999997369978976599999
Q 003637 669 YARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEAF 742 (806)
Q Consensus 669 ~ar~~~~p~ls~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~ai 742 (806)
.........+++++.+.|.+. .. | ++|++.+++..+.+. ..+.|+.+||.+++
T Consensus 185 ~i~~~e~~~~~~~~l~~i~~~--------s~-G--------d~R~ain~l~~~~~~----~~~~I~~~~v~~~l 237 (239)
T d1njfa_ 185 HILNEEHIAHEPRALQLLARA--------AE-G--------SLRDALSLTDQAIAS----GDGQVSTQAVSAML 237 (239)
T ss_dssp HHHHHHTCCBCHHHHHHHHHH--------TT-T--------CHHHHHHHHHHHHHH----TTTSBCHHHHHHHH
T ss_pred HHHHHHCCCCCHHHHHHHHHH--------CC-C--------CHHHHHHHHHHHHHH----CCCCCCHHHHHHHH
T ss_conf 877643147899999999997--------69-9--------799999999999984----79985899999986
No 10
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.51 E-value=6.6e-14 Score=113.02 Aligned_cols=231 Identities=19% Similarity=0.250 Sum_probs=121.5
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHCCCCCC-CCCCCCC-CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCC
Q ss_conf 9821563355046688775310179533-4899975-4566425998789994999999999978997001699731005
Q 003637 441 TRSLAPNIWELDDVKKGLLCQLFGGNAL-KLPSGAS-FRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVG 518 (806)
Q Consensus 441 ~~sl~P~I~G~e~vK~~ill~L~gg~~~-~~~~g~~-~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~g 518 (806)
.+.|.-.|+||+++|+.+..++...... ....... ....-++||+||||||||.||+++++.+... +..+.
T Consensus 9 ~~~L~~~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~-------~~~i~ 81 (309)
T d1ofha_ 9 VSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAP-------FIKVE 81 (309)
T ss_dssp HHHHHTTCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCC-------EEEEE
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCC-------HHCCC
T ss_conf 99965813491999999999999898772457877667898669998999988889999986213221-------00034
Q ss_pred CEEEEECCCCCCCCCCC-----------CC-CCC-CCCCCEEECCCCCCCCHH------------HHHHHHHHHHHCEEE
Q ss_conf 41445318888731003-----------45-201-257731221211138999------------999999988624789
Q 003637 519 LTAYVTKDPETGETVLE-----------SG-ALV-LSDRGICCIDEFDKMSES------------ARSMLHEVMEQQTVS 573 (806)
Q Consensus 519 Lta~~~kd~~~ge~~le-----------~G-al~-lad~GIl~IDEidkl~~~------------~q~~L~e~mE~q~is 573 (806)
++.+... +.|... ++ ++. ....+|+||||+|++.+. .++.|+..|+..+++
T Consensus 82 ~s~~~~~----~~~~~~~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~ 157 (309)
T d1ofha_ 82 ATKFTEV----GYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVS 157 (309)
T ss_dssp GGGGSSC----CSGGGSTTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEE
T ss_pred CCCCCCC----EEEEEECCCCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEE
T ss_conf 4330101----157641133333321233123200357856884246454030157641201257998752886198885
Q ss_pred EEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 70034356306731799702899987887775000113896226920145554067996899999999998630499986
Q 003637 574 IAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENS 653 (806)
Q Consensus 574 i~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~ 653 (806)
.. ..... .....++++.+.... ....+.|.+..|||.+ +.+..++.+...++... +..
T Consensus 158 ~~-~~~i~--~s~ilfi~~ga~~~~---------~~~~~~p~l~~R~~~~-i~~~~~~~~~~~~Il~~----~~~----- 215 (309)
T d1ofha_ 158 TK-HGMVK--TDHILFIASGAFQVA---------RPSDLIPELQGRLPIR-VELTALSAADFERILTE----PHA----- 215 (309)
T ss_dssp ET-TEEEE--CTTCEEEEEECCSSS---------CGGGSCHHHHHTCCEE-EECCCCCHHHHHHHHHS----STT-----
T ss_pred CC-CEEEE--CCCEEEEECCCHHHC---------CCCCCHHHHHHHHHEE-EECCCCCHHHHHHHHHH----HHH-----
T ss_conf 58-80797--462268704612214---------7200125443102003-00257887999999988----898-----
Q ss_pred CCCCCCHHHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 5788999999999999996-089999999999999999998834999999986233599999999999
Q 003637 654 EQGVLDLATLTAYVSYARK-HIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRL 720 (806)
Q Consensus 654 ~~~~i~~~~lk~yi~~ar~-~~~p~ls~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirl 720 (806)
.....+...... ...-.+++.+...+...+..+...... ..+|.|+++++-
T Consensus 216 -------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~GaR~L~~~ie~ 267 (309)
T d1ofha_ 216 -------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTEN---------IGARRLHTVMER 267 (309)
T ss_dssp -------CHHHHHHHHHHHTTCEEEECHHHHHHHHHHHHHHHHHSCC---------CTTHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHH---------CCCHHHHHHHHH
T ss_conf -------8899999987502775210048999998888787404420---------074689999999
No 11
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.47 E-value=2.1e-13 Score=109.48 Aligned_cols=244 Identities=17% Similarity=0.185 Sum_probs=135.7
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHCCCCCCC-----CCC-------------CCCCCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 998215633550466887753101795334-----899-------------97545664259987899949999999999
Q 003637 440 LTRSLAPNIWELDDVKKGLLCQLFGGNALK-----LPS-------------GASFRGDINILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 440 l~~sl~P~I~G~e~vK~~ill~L~gg~~~~-----~~~-------------g~~~r~~i~VLL~GdPGtGKS~llr~ia~ 501 (806)
|.+.|.-.|+||+++|+++..++....... ... ....+..-|+||+||+|+|||.+++.+|+
T Consensus 11 i~~~L~~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~ 90 (364)
T d1um8a_ 11 LKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAK 90 (364)
T ss_dssp HHHHHHTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHH
T ss_pred HHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHH
T ss_conf 99995896238089999999999989988877887640444433111122334567875324418998637899999986
Q ss_pred HCCCCEECCCCCCCCCCCEEEEECCCC---CCCCC-----CCCCCCCCCCCCEEECCCCCC--------------CCHHH
Q ss_conf 789970016997310054144531888---87310-----034520125773122121113--------------89999
Q 003637 502 LSPRGIYTSGKGSSAVGLTAYVTKDPE---TGETV-----LESGALVLSDRGICCIDEFDK--------------MSESA 559 (806)
Q Consensus 502 ~~pr~~~tsg~~~~~~gLta~~~kd~~---~ge~~-----le~Gal~lad~GIl~IDEidk--------------l~~~~ 559 (806)
.+.. ++..+.++.+...+.. .+... ...+....+..|++++||++| ..+..
T Consensus 91 ~~~~-------~~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V 163 (364)
T d1um8a_ 91 HLDI-------PIAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGV 163 (364)
T ss_dssp HTTC-------CEEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CHHH
T ss_pred HCCC-------CEEEHHHHHCCCCHHHHHHHCCCHHHHHHHCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHH
T ss_conf 4435-------331112220144316676312103445420245899865463010166653134544555512214388
Q ss_pred HHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCC---------------------CCCCCCCCC-------------
Q ss_conf 9999998862478970034356306731799702899---------------------987887775-------------
Q 003637 560 RSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPS---------------------GSRYNPRLS------------- 605 (806)
Q Consensus 560 q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~---------------------~g~~~~~~~------------- 605 (806)
++.|++.|+.+...+...+....-..++.++.++|-. ...|.....
T Consensus 164 ~~~lLqild~~~~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (364)
T d1um8a_ 164 QQALLKIVEGSLVNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQ 243 (364)
T ss_dssp HHHHHHHHHCCEEC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCC
T ss_pred HHHHHHHHCCCEECCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCC
T ss_conf 98645540586122587778767764168996113455411131014566543014454310001100124666530245
Q ss_pred --CCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH-HCCCCCCCHHH
Q ss_conf --000113896226920145554067996899999999998630499986578899999999999999-60899999999
Q 003637 606 --VIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYAR-KHIHPKLSDEA 682 (806)
Q Consensus 606 --~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar-~~~~p~ls~ea 682 (806)
......+.|-++.|+|.+ +.++.-+.+.-.+|+....+ ..+++|..... +.+.-.++++|
T Consensus 244 ~~~~~~~~f~PEf~gRi~~i-v~f~~L~~~~l~~Il~~~~~----------------~l~kq~~~~l~~~gi~L~~td~a 306 (364)
T d1um8a_ 244 THDLVTYGLIPELIGRLPVL-STLDSISLEAMVDILQKPKN----------------ALIKQYQQLFKMDEVDLIFEEEA 306 (364)
T ss_dssp HHHHHHTTCCHHHHTTCCEE-EECCCCCHHHHHHHHHSSTT----------------CHHHHHHHHHHTTTCEEEECHHH
T ss_pred HHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHCCCEEEECHHH
T ss_conf 78776530079999872301-55740209999999987999----------------99999999987579279998999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 999999999988349999999862335999999999999
Q 003637 683 AEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLS 721 (806)
Q Consensus 683 ~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla 721 (806)
.+.|.+..... .+.+|.|.++|+-.
T Consensus 307 ~~~la~~g~d~--------------~~GAR~L~riie~~ 331 (364)
T d1um8a_ 307 IKEIAQLALER--------------KTGARGLRAIIEDF 331 (364)
T ss_dssp HHHHHHHHHHT--------------TCTGGGHHHHHHHH
T ss_pred HHHHHHHCCCC--------------CCCCHHHHHHHHHH
T ss_conf 99999956587--------------77836789999999
No 12
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.47 E-value=9e-14 Score=112.08 Aligned_cols=203 Identities=21% Similarity=0.236 Sum_probs=130.3
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECC
Q ss_conf 33550466887753101795334899975456642599878999499999999997899700169973100541445318
Q 003637 447 NIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKD 526 (806)
Q Consensus 447 ~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd 526 (806)
.++|++++++.+.-.+-.+. . .|+||+||||+|||++++.+++.+....+ ...-+. ....+
T Consensus 15 divg~~~~~~~L~~~i~~~~---~---------~~lLl~Gp~G~GKttl~~~la~~l~~~~~------~~~~~e-~~~~~ 75 (227)
T d1sxjc2 15 EVYGQNEVITTVRKFVDEGK---L---------PHLLFYGPPGTGKTSTIVALAREIYGKNY------SNMVLE-LNASD 75 (227)
T ss_dssp GCCSCHHHHHHHHHHHHTTC---C---------CCEEEECSSSSSHHHHHHHHHHHHHTTSH------HHHEEE-ECTTS
T ss_pred HCCCCHHHHHHHHHHHHCCC---C---------CEEEEECCCCCCHHHHHHHHHHHHHCCCC------CCEEEE-ECCCC
T ss_conf 83596999999999997699---9---------85999889987755899999998516777------641577-31555
Q ss_pred CCCCCCCC--------CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCC
Q ss_conf 88873100--------3452012577312212111389999999999886247897003435630673179970289998
Q 003637 527 PETGETVL--------ESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGS 598 (806)
Q Consensus 527 ~~~ge~~l--------e~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g 598 (806)
. .+.... ....+......+++|||++.+....+.+|+.+||+. ...+.++.++|.
T Consensus 76 ~-~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~-------------~~~~~~~~~~~~--- 138 (227)
T d1sxjc2 76 D-RGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIERY-------------TKNTRFCVLANY--- 138 (227)
T ss_dssp C-CSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSCHHHHHHHHHHHHHT-------------TTTEEEEEEESC---
T ss_pred C-CCEEEEECCHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHC-------------CCCEEECCCCCC---
T ss_conf 6-87543210001011100025777189999663200023789999886311-------------200232012670---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 78877750001138962269201455540679968999999999986304999865788999999999999996089999
Q 003637 599 RYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPKL 678 (806)
Q Consensus 599 ~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~l 678 (806)
...+++++.+||..+ ....++.+.+++++...-......+
T Consensus 139 ----------~~~i~~~i~sr~~~i------------------------------~~~~~~~~~i~~~l~~I~~~e~i~i 178 (227)
T d1sxjc2 139 ----------AHKLTPALLSQCTRF------------------------------RFQPLPQEAIERRIANVLVHEKLKL 178 (227)
T ss_dssp ----------GGGSCHHHHTTSEEE------------------------------ECCCCCHHHHHHHHHHHHHTTTCCB
T ss_pred ----------HHHHHHHHHHHHHHH------------------------------CCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf ----------877599999887540------------------------------1235652000110212211112458
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 9999999999999988349999999862335999999999999999997369978976599999
Q 003637 679 SDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEAF 742 (806)
Q Consensus 679 s~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~ai 742 (806)
++++++.|++.. .| .+|.+.+.++.+...+.......|+.++|.+++
T Consensus 179 ~~~~l~~i~~~s---------~G--------d~R~ain~Lq~~~~~~~~~~~~~It~~~v~e~~ 225 (227)
T d1sxjc2 179 SPNAEKALIELS---------NG--------DMRRVLNVLQSCKATLDNPDEDEISDDVIYECC 225 (227)
T ss_dssp CHHHHHHHHHHH---------TT--------CHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHHT
T ss_pred CHHHHHHHHHHC---------CC--------CHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHH
T ss_conf 989999999984---------99--------699999999999985578888822899999976
No 13
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.46 E-value=6.5e-13 Score=105.97 Aligned_cols=221 Identities=18% Similarity=0.227 Sum_probs=128.6
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCC
Q ss_conf 99998215633550466887753101795334899975456642599878999499999999997899700169973100
Q 003637 438 ETLTRSLAPNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAV 517 (806)
Q Consensus 438 ~~l~~sl~P~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~ 517 (806)
..|.+.+.-.|+||+++++.+.-.+..... ..... .+....+||+||+|+|||.+|+.+++.+... +.++...
T Consensus 15 ~~l~~~L~~~v~GQ~~ai~~v~~~i~~~~~-~l~~~--~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~----~~~~~~~ 87 (315)
T d1qvra3 15 LRLEEELHKRVVGQDEAIRAVADAIRRARA-GLKDP--NRPIGSFLFLGPTGVGKTELAKTLAATLFDT----EEAMIRI 87 (315)
T ss_dssp HSHHHHHHHHSCSCHHHHHHHHHHHHHHGG-GCSCS--SSCSEEEEEBSCSSSSHHHHHHHHHHHHHSS----GGGEEEE
T ss_pred HHHHHHHCCEEECHHHHHHHHHHHHHHHHC-CCCCC--CCCCEEEEEECCCCCHHHHHHHHHHHHHCCC----CCCEEEE
T ss_conf 999999568270879999999999999865-78998--8876699997888624899999999983588----7534887
Q ss_pred CCEEEEECCC----------CCC----CCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEE
Q ss_conf 5414453188----------887----31003452012577312212111389999999999886247897003435630
Q 003637 518 GLTAYVTKDP----------ETG----ETVLESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASL 583 (806)
Q Consensus 518 gLta~~~kd~----------~~g----e~~le~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l 583 (806)
+++.+..... ..| .+. ..++.....+|+++|||||+.++.++.|+++|+.++++-. ......
T Consensus 88 ~~~~~~~~~~~~~L~g~~~gyvG~~~~~~l--~~~~~~~p~~Vvl~DEieK~~~~v~~~ll~~l~~g~~~~~--~gr~v~ 163 (315)
T d1qvra3 88 DMTEYMEKHAVSRLIGAPPGYVGYEEGGQL--TEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDS--HGRTVD 163 (315)
T ss_dssp CTTTCCSSGGGGGC--------------CH--HHHHHHCSSEEEEESSGGGSCHHHHHHHHHHHTTTEECCS--SSCCEE
T ss_pred ECCCCCCCHHHHHHCCCCCCCCCCCCCCHH--HHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCEECC--CCCEEC
T ss_conf 315545421566514899987674667848--9999849983799714754078999899998613834279--996853
Q ss_pred CCCEEEEEECCCCCC-------CCCCCC----CCCC--CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 673179970289998-------788777----5000--113896226920145554067996899999999998630499
Q 003637 584 NARTSVLACANPSGS-------RYNPRL----SVIE--NIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENP 650 (806)
Q Consensus 584 ~~r~siIaaaNp~~g-------~~~~~~----~~~~--~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~ 650 (806)
-.++.+|+++|-... .+.... ...+ .-.++|.+++|||.+ +.+...+.+.-..++...+..
T Consensus 164 ~~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~I-i~F~~L~~~~~~~I~~~~l~~----- 237 (315)
T d1qvra3 164 FRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEI-VVFRPLTKEQIRQIVEIQLSY----- 237 (315)
T ss_dssp CTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBC-CBCCCCCHHHHHHHHHHHHHH-----
T ss_pred CCCEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCEE-EECCCHHHHHHHHHHHHHHHH-----
T ss_conf 75428987424576777640011220455567788888862388787217805-432102454368999999999-----
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 986578899999999999999608999999999999999
Q 003637 651 ENSEQGVLDLATLTAYVSYARKHIHPKLSDEAAEELTRG 689 (806)
Q Consensus 651 ~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ea~~~L~~~ 689 (806)
+++. +..+.+...+++++.+.|++.
T Consensus 238 ------------l~~r--l~~~~i~l~i~~~~~~~L~~~ 262 (315)
T d1qvra3 238 ------------LRAR--LAEKRISLELTEAAKDFLAER 262 (315)
T ss_dssp ------------HHHH--HHTTTCEEEECHHHHHHHHHH
T ss_pred ------------HHHH--HHHCCCCCCCCHHHHHHHHHH
T ss_conf ------------9999--872420220669999999994
No 14
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.44 E-value=2.4e-12 Score=101.93 Aligned_cols=205 Identities=14% Similarity=0.125 Sum_probs=123.3
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCE---ECCCCCCCCCCCEEE
Q ss_conf 63355046688775310179533489997545664259987899949999999999789970---016997310054144
Q 003637 446 PNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGI---YTSGKGSSAVGLTAY 522 (806)
Q Consensus 446 P~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~---~tsg~~~~~~gLta~ 522 (806)
..++|++.....++-.|....+ -|+||+|+||+|||.+++.+++....+. .-.++......+...
T Consensus 18 d~~igRd~Ei~~l~~iL~r~~k------------~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~l 85 (268)
T d1r6bx2 18 DPLIGREKELERAIQVLCRRRK------------NNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 85 (268)
T ss_dssp CCCCSCHHHHHHHHHHHTSSSS------------CEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC--
T ss_pred CCCCCHHHHHHHHHHHHHCCCC------------CCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHH
T ss_conf 8663809999999999954766------------8967988898867799999999998178450003541278640567
Q ss_pred EECCCCCCCCCCCC----CCCCCCCCCEEECCCCCCCC---------HHHHHHHHHHHHHCEEEEEECCEEEEECCCEEE
Q ss_conf 53188887310034----52012577312212111389---------999999999886247897003435630673179
Q 003637 523 VTKDPETGETVLES----GALVLSDRGICCIDEFDKMS---------ESARSMLHEVMEQQTVSIAKAGIIASLNARTSV 589 (806)
Q Consensus 523 ~~kd~~~ge~~le~----Gal~lad~GIl~IDEidkl~---------~~~q~~L~e~mE~q~isi~kag~~~~l~~r~si 589 (806)
+......|+|.... ..+..+.+.|+||||++.+- .+.-+.|..++..+ .+.+
T Consensus 86 iag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~rg---------------~i~v 150 (268)
T d1r6bx2 86 LAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG---------------KIRV 150 (268)
T ss_dssp -CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSSSC---------------CCEE
T ss_pred HCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHCC---------------CCEE
T ss_conf 5067630058999999999861267846884336988627777886411798764887479---------------8759
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 97028999878877750001138962269201455540679968999999999986304999865788999999999999
Q 003637 590 LACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSY 669 (806)
Q Consensus 590 IaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ 669 (806)
|+++.|.+.+ +-+.-.++|.+||..+ .++.|+.+.-..|...+...+.. ...-.++.+.++..+.+
T Consensus 151 IgatT~eey~--------~~~e~d~al~rrF~~I--~V~Eps~e~t~~IL~~~~~~~e~----~h~v~~~~~al~~~v~l 216 (268)
T d1r6bx2 151 IGSTTYQEFS--------NIFEKDRALARRFQKI--DITEPSIEETVQIINGLKPKYEA----HHDVRYTAKAVRAAVEL 216 (268)
T ss_dssp EEEECHHHHH--------CCCCCTTSSGGGEEEE--ECCCCCHHHHHHHHHHHHHHHHH----HHTCCCCHHHHHHHHHH
T ss_pred EEECCHHHHH--------HHHHHCHHHHHHHCCC--CCCCCCHHHHHHHHHHHHHHHHC----CCCEEECHHHHHHHHHH
T ss_conf 9957999999--------9986167888652100--36898999999999986688852----68778574789999999
Q ss_pred HHHCCCC-CCCHHHHHHHHHHHH
Q ss_conf 9960899-999999999999999
Q 003637 670 ARKHIHP-KLSDEAAEELTRGYV 691 (806)
Q Consensus 670 ar~~~~p-~ls~ea~~~L~~~y~ 691 (806)
+.+++.- .+++.|.++|.+...
T Consensus 217 s~ryi~~~~~PdKAIdllDea~a 239 (268)
T d1r6bx2 217 AVKYINDRHLPDKAIDVIDEAGA 239 (268)
T ss_dssp HHHHCTTSCTTHHHHHHHHHHHH
T ss_pred HHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 98560478898489999999999
No 15
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.40 E-value=9.2e-12 Score=97.84 Aligned_cols=211 Identities=20% Similarity=0.155 Sum_probs=124.9
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCC------CEECCCCCCCCCCCE
Q ss_conf 33550466887753101795334899975456642599878999499999999997899------700169973100541
Q 003637 447 NIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPR------GIYTSGKGSSAVGLT 520 (806)
Q Consensus 447 ~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr------~~~tsg~~~~~~gLt 520 (806)
.++||++++..+.-.+-++. . .|+||+||||+|||++++.+++.+.. ..+..+. ....+..
T Consensus 13 diig~~~~~~~l~~~i~~~~---~---------~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~-~~~~~~~ 79 (237)
T d1sxjd2 13 EVTAQDHAVTVLKKTLKSAN---L---------PHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNA-SDERGIS 79 (237)
T ss_dssp TCCSCCTTHHHHHHHTTCTT---C---------CCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECS-SSCCCHH
T ss_pred HCCCCHHHHHHHHHHHHCCC---C---------CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHEEC-CCCCCCH
T ss_conf 72693999999999998699---8---------859998999998499999999997097633432122002-1135606
Q ss_pred EE--EECCCC-CCCC---CCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECC
Q ss_conf 44--531888-8731---00345201257731221211138999999999988624789700343563067317997028
Q 003637 521 AY--VTKDPE-TGET---VLESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACAN 594 (806)
Q Consensus 521 a~--~~kd~~-~ge~---~le~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaN 594 (806)
.. ..++.. .... .............+++|||++.+....++.|+..++... ..+.++.++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~-------------~~~~~i~~~~ 146 (237)
T d1sxjd2 80 IVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS-------------GVTRFCLICN 146 (237)
T ss_dssp HHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTT-------------TTEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCC-------------CCCCCCCCCC
T ss_conf 789999887654443246787761356673699995513367777888763012222-------------3333212246
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99987887775000113896226920145554067996899999999998630499986578899999999999999608
Q 003637 595 PSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHI 674 (806)
Q Consensus 595 p~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~ 674 (806)
. .-.+.+++.+||-.+ ....++.+.+++++.......
T Consensus 147 ~-------------~~~~~~~l~sr~~~i------------------------------~f~~~~~~~~~~~L~~i~~~e 183 (237)
T d1sxjd2 147 Y-------------VTRIIDPLASQCSKF------------------------------RFKALDASNAIDRLRFISEQE 183 (237)
T ss_dssp C-------------GGGSCHHHHHHSEEE------------------------------ECCCCCHHHHHHHHHHHHHTT
T ss_pred C-------------CCCCCCCCCCHHHHH------------------------------CCCCCCCCCCCHHHHHHHHHH
T ss_conf 6-------------422233111000110------------------------------233333321100101145552
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHH
Q ss_conf 9999999999999999998834999999986233599999999999999999736-99789765999999
Q 003637 675 HPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRL-SELVEKHDVEEAFR 743 (806)
Q Consensus 675 ~p~ls~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~l-~~~V~~~Dv~~ai~ 743 (806)
...+++++.+.|.+.. .| .+|...++++.+...+.... ...|+.++|.++..
T Consensus 184 ~i~i~~~~l~~ia~~s---------~g--------d~R~ai~~L~~~~~~~~~~~~~~~It~~~i~e~~g 236 (237)
T d1sxjd2 184 NVKCDDGVLERILDIS---------AG--------DLRRGITLLQSASKGAQYLGDGKNITSTQVEELAG 236 (237)
T ss_dssp TCCCCHHHHHHHHHHT---------SS--------CHHHHHHHHHHTHHHHHHHCSCCCCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHC---------CC--------CHHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHC
T ss_conf 6757899999999985---------99--------89999999999997363127888458999998529
No 16
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.40 E-value=8.3e-12 Score=98.16 Aligned_cols=198 Identities=20% Similarity=0.207 Sum_probs=123.9
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECC
Q ss_conf 33550466887753101795334899975456642599878999499999999997899700169973100541445318
Q 003637 447 NIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKD 526 (806)
Q Consensus 447 ~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd 526 (806)
.++|++.++..+.-.+-.+. .+ |+||+||||+|||++++.+++.+....+. .....+.+. +
T Consensus 16 d~ig~~~~~~~L~~~~~~~~---~~---------~~ll~Gp~G~GKTt~a~~la~~l~~~~~~----~~~~~~n~~---~ 76 (224)
T d1sxjb2 16 DIVGNKETIDRLQQIAKDGN---MP---------HMIISGMPGIGKTTSVHCLAHELLGRSYA----DGVLELNAS---D 76 (224)
T ss_dssp GCCSCTHHHHHHHHHHHSCC---CC---------CEEEECSTTSSHHHHHHHHHHHHHGGGHH----HHEEEECTT---S
T ss_pred HHCCCHHHHHHHHHHHHCCC---CC---------EEEEECCCCCCCHHHHHHHHHHHHCCCCC----CCCCCCCCC---C
T ss_conf 90297999999999998699---87---------49998899987054699999997256643----221111134---5
Q ss_pred CCCCCCCC---------CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCC
Q ss_conf 88873100---------345201257731221211138999999999988624789700343563067317997028999
Q 003637 527 PETGETVL---------ESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 597 (806)
Q Consensus 527 ~~~ge~~l---------e~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~ 597 (806)
. .+.... ...........+++|||+|.|....|.+|+..||.. ...+.++.++|.
T Consensus 77 ~-~~~~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~-------------~~~~~~i~~~~~-- 140 (224)
T d1sxjb2 77 D-RGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELY-------------SNSTRFAFACNQ-- 140 (224)
T ss_dssp C-CSHHHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSCHHHHHTTHHHHHHT-------------TTTEEEEEEESC--
T ss_pred C-CCCEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCC-------------CCCEEEEECCCC--
T ss_conf 5-785211667887887622477763599998244323215778775201123-------------333366531474--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 87887775000113896226920145554067996899999999998630499986578899999999999999608999
Q 003637 598 SRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPK 677 (806)
Q Consensus 598 g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~ 677 (806)
.-.+.+++.|||..+ ....++.+.+.+++....+.....
T Consensus 141 -----------~~~i~~~l~sr~~~i------------------------------~~~~~~~~~i~~~l~~i~~~e~~~ 179 (224)
T d1sxjb2 141 -----------SNKIIEPLQSQCAIL------------------------------RYSKLSDEDVLKRLLQIIKLEDVK 179 (224)
T ss_dssp -----------GGGSCHHHHTTSEEE------------------------------ECCCCCHHHHHHHHHHHHHHHTCC
T ss_pred -----------HHHHHHHHHHHHHHH------------------------------HHCCCCHHHHHHHHHHHHHHCCCC
T ss_conf -----------302106788777776------------------------------531332245678887777740467
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 99999999999999988349999999862335999999999999999997369978976599999
Q 003637 678 LSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEAF 742 (806)
Q Consensus 678 ls~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~ai 742 (806)
+++++.+.|.... .| .+|.+.+.++.+.+ ....++.++|.+++
T Consensus 180 i~~~~l~~I~~~s---------~G--------d~R~ai~~Lq~~~~-----~~~~i~~~~i~~~~ 222 (224)
T d1sxjb2 180 YTNDGLEAIIFTA---------EG--------DMRQAINNLQSTVA-----GHGLVNADNVFKIV 222 (224)
T ss_dssp BCHHHHHHHHHHH---------TT--------CHHHHHHHHHHHHH-----HHSSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHC---------CC--------CHHHHHHHHHHHHH-----CCCCCCHHHHHHHH
T ss_conf 8999999999986---------99--------69999999999997-----69984899999986
No 17
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.38 E-value=2.8e-12 Score=101.51 Aligned_cols=201 Identities=16% Similarity=0.191 Sum_probs=122.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECC
Q ss_conf 33550466887753101795334899975456642599878999499999999997899700169973100541445318
Q 003637 447 NIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKD 526 (806)
Q Consensus 447 ~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd 526 (806)
.|+|++.++..+.-.+-.+. . .|+||+||||+|||++++.+++.+....+. .....+.+...++
T Consensus 25 diig~~~~~~~l~~~i~~~~---~---------~~lll~Gp~G~GKTtla~~iak~l~~~~~~----~~~~e~n~s~~~~ 88 (231)
T d1iqpa2 25 DIVGQEHIVKRLKHYVKTGS---M---------PHLLFAGPPGVGKTTAALALARELFGENWR----HNFLELNASDERG 88 (231)
T ss_dssp TCCSCHHHHHHHHHHHHHTC---C---------CEEEEESCTTSSHHHHHHHHHHHHHGGGHH----HHEEEEETTCHHH
T ss_pred HCCCCHHHHHHHHHHHHCCC---C---------CEEEEECCCCCCHHHHHHHHHHHHHHCCCC----CCEEEEECCCCCC
T ss_conf 91393999999999998599---9---------769997899974879999999998731467----7715875676666
Q ss_pred CCCC-CCCC---CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCC
Q ss_conf 8887-3100---34520125773122121113899999999998862478970034356306731799702899987887
Q 003637 527 PETG-ETVL---ESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNP 602 (806)
Q Consensus 527 ~~~g-e~~l---e~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~ 602 (806)
.... +... ...........++++||++.+....+.+|+..|+... ..+.+++++|.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~-------------~~~~~i~~~n~------- 148 (231)
T d1iqpa2 89 INVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNY------- 148 (231)
T ss_dssp HHTTHHHHHHHHHSCCGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTT-------------TTEEEEEEESC-------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHCCCCC-------------CCEEEEECCCC-------
T ss_conf 3488888888875100157872288614344312147898764112477-------------64478861487-------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
Q ss_conf 77500011389622692014555406799689999999999863049998657889999999999999960899999999
Q 003637 603 RLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPKLSDEA 682 (806)
Q Consensus 603 ~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ea 682 (806)
.-.+++++.+||..+ .+ ...+.+.+.+++...-......+++++
T Consensus 149 ------~~~i~~~l~sR~~~i--~~----------------------------~~~~~~~~~~~l~~~~~~e~i~i~~~~ 192 (231)
T d1iqpa2 149 ------SSKIIEPIQSRCAIF--RF----------------------------RPLRDEDIAKRLRYIAENEGLELTEEG 192 (231)
T ss_dssp ------GGGSCHHHHHTEEEE--EC----------------------------CCCCHHHHHHHHHHHHHTTTCEECHHH
T ss_pred ------HHHCHHHHHCCCCCC--CC----------------------------CCCCHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf ------665657684731210--12----------------------------334304677899888998399989999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 99999999998834999999986233599999999999999999736997897659999
Q 003637 683 AEELTRGYVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEA 741 (806)
Q Consensus 683 ~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~a 741 (806)
++.|.+.+ . | .+|++.++++.+. .+.+.++.++|.++
T Consensus 193 l~~I~~~~-------~--g--------diR~ai~~Lq~~~-----~~~~~it~e~v~~v 229 (231)
T d1iqpa2 193 LQAILYIA-------E--G--------DMRRAINILQAAA-----ALDKKITDENVFMV 229 (231)
T ss_dssp HHHHHHHH-------T--T--------CHHHHHHHHHHHH-----TTCSEECHHHHHHH
T ss_pred HHHHHHHC-------C--C--------CHHHHHHHHHHHH-----HCCCCCCHHHHHHH
T ss_conf 99999983-------9--9--------7999999999999-----84999589998765
No 18
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=1.4e-12 Score=103.69 Aligned_cols=161 Identities=20% Similarity=0.214 Sum_probs=93.0
Q ss_pred CCCCHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEE
Q ss_conf 3355046688775310---1795334899975456642599878999499999999997899700169973100541445
Q 003637 447 NIWELDDVKKGLLCQL---FGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYV 523 (806)
Q Consensus 447 ~I~G~e~vK~~ill~L---~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~ 523 (806)
.|.|++.+|+.|.-.+ +.........|...+ -.+||+||||||||.+++++++.+...++. +.++...
T Consensus 5 dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~--~giLL~GppGtGKT~l~~ala~~~~~~~~~-------i~~~~l~ 75 (258)
T d1e32a2 5 DVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPP--RGILLYGPPGTGKTLIARAVANETGAFFFL-------INGPEIM 75 (258)
T ss_dssp GCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCC--CEEEEECCTTSSHHHHHHHHHHHTTCEEEE-------ECHHHHT
T ss_pred HHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCC--CEEEEECCCCCCCHHHHHHHHHHHCCEEEE-------EECHHHC
T ss_conf 6310999999999999988319999986799988--646876699888308999999874883799-------9730430
Q ss_pred ECCCCCCC--CCCCCCCCCC---CCCCEEECCCCCCCCHHH-----------HHHHHHHHHHCEEEEEECCEEEEECCCE
Q ss_conf 31888873--1003452012---577312212111389999-----------9999998862478970034356306731
Q 003637 524 TKDPETGE--TVLESGALVL---SDRGICCIDEFDKMSESA-----------RSMLHEVMEQQTVSIAKAGIIASLNART 587 (806)
Q Consensus 524 ~kd~~~ge--~~le~Gal~l---ad~GIl~IDEidkl~~~~-----------q~~L~e~mE~q~isi~kag~~~~l~~r~ 587 (806)
....|+ ..+.. .+.. ....|++|||+|.+.... ...++..++. ...+.++
T Consensus 76 --~~~~g~~~~~l~~-~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~v 141 (258)
T d1e32a2 76 --SKLAGESESNLRK-AFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDG-----------LKQRAHV 141 (258)
T ss_dssp --TSCTTHHHHHHHH-HHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHT-----------CCCSSCE
T ss_pred --CCCCCCHHHHHHH-HHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC-----------CCCCCCC
T ss_conf --2545617888899-9999986499499852111322578877770689998775001101-----------2346881
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 7997028999878877750001138962269--20145554067996899999999998
Q 003637 588 SVLACANPSGSRYNPRLSVIENIHLPPTLLS--RFDLIYLILDKADEQTDRRLAKHIVS 644 (806)
Q Consensus 588 siIaaaNp~~g~~~~~~~~~~~i~lp~~lls--RFDlif~l~d~~~~~~d~~la~~il~ 644 (806)
.++||+|- .-.+++++++ |||.. +.++.|+.+....|.++.+.
T Consensus 142 lvi~tTn~-------------~~~ld~al~r~gRfd~~-i~~~~P~~~~R~~il~~~l~ 186 (258)
T d1e32a2 142 IVMAATNR-------------PNSIDPALRRFGRFDRE-VDIGIPDATGRLEILQIHTK 186 (258)
T ss_dssp EEEEEESC-------------GGGSCGGGTSTTSSCEE-EECCCCCHHHHHHHHHHTTT
T ss_pred CEEEECCC-------------CCCCCHHHHHCCCCCCE-EECCCCCHHHHHHHHHHHCC
T ss_conf 17975799-------------31025245424630232-37899998899987322045
No 19
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.30 E-value=2.7e-11 Score=94.55 Aligned_cols=210 Identities=17% Similarity=0.222 Sum_probs=138.3
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCE---ECCCCCCCCCCCEEE
Q ss_conf 63355046688775310179533489997545664259987899949999999999789970---016997310054144
Q 003637 446 PNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGI---YTSGKGSSAVGLTAY 522 (806)
Q Consensus 446 P~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~---~tsg~~~~~~gLta~ 522 (806)
..++|++.....++-.|....+ -|++|+|+||+|||.+++.+++..-.+. .-.++......+...
T Consensus 22 d~~~gr~~ei~~~~~~L~r~~k------------~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l 89 (387)
T d1qvra2 22 DPVIGRDEEIRRVIQILLRRTK------------NNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSL 89 (387)
T ss_dssp CCCCSCHHHHHHHHHHHHCSSC------------CCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC---
T ss_pred CCCCCCHHHHHHHHHHHHCCCC------------CCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHHH
T ss_conf 9874808999999999824889------------9976879999889999999999998089997886966899557666
Q ss_pred EECCCCCCCCCCCCCC----CCCCC-CCEEECCCCCCCCH--------HHHHHHHHHHHHCEEEEEECCEEEEECCCEEE
Q ss_conf 5318888731003452----01257-73122121113899--------99999999886247897003435630673179
Q 003637 523 VTKDPETGETVLESGA----LVLSD-RGICCIDEFDKMSE--------SARSMLHEVMEQQTVSIAKAGIIASLNARTSV 589 (806)
Q Consensus 523 ~~kd~~~ge~~le~Ga----l~lad-~GIl~IDEidkl~~--------~~q~~L~e~mE~q~isi~kag~~~~l~~r~si 589 (806)
+......|+|.-+.-. +..+. +-|+||||++.+-. +.-+.|..+|..+. +.+
T Consensus 90 ~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~rg~---------------~~~ 154 (387)
T d1qvra2 90 LAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGE---------------LRL 154 (387)
T ss_dssp --------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHHTTC---------------CCE
T ss_pred HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHCCC---------------CCE
T ss_conf 52667413689999999998505899669872408888427778774138999999973788---------------516
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 97028999878877750001138962269201455540679968999999999986304999865788999999999999
Q 003637 590 LACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSY 669 (806)
Q Consensus 590 IaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ 669 (806)
|+++.|.+.+ .+.-.++|.+||..+ .++.|+.+.-..|.+.+...+-. +..-.++.+.+...+..
T Consensus 155 I~~tT~~ey~---------~~e~d~al~rrF~~v--~v~ep~~~~~~~il~~~~~~~e~----~h~v~~~~~ai~~~v~l 219 (387)
T d1qvra2 155 IGATTLDEYR---------EIEKDPALERRFQPV--YVDEPTVEETISILRGLKEKYEV----HHGVRISDSAIIAAATL 219 (387)
T ss_dssp EEEECHHHHH---------HHTTCTTTCSCCCCE--EECCCCHHHHHHHHHHHHHHHHH----HTTCEECHHHHHHHHHH
T ss_pred EEECCHHHHH---------HHCCCHHHHHHCCCC--CCCCCCHHHHHHHHHHHHHHHHH----CCCCCCCHHHHHHHHHH
T ss_conf 6636899998---------763367999824611--27998678899999999999874----04774669999999985
Q ss_pred HHHCCCC-CCCHHHHHHHHHHHHHHHHCC
Q ss_conf 9960899-999999999999999988349
Q 003637 670 ARKHIHP-KLSDEAAEELTRGYVEMRRRG 697 (806)
Q Consensus 670 ar~~~~p-~ls~ea~~~L~~~y~~lR~~~ 697 (806)
+.+++.- .+++.|.++|-......+-..
T Consensus 220 s~ryi~~r~~PdKAidlld~a~a~~~i~~ 248 (387)
T d1qvra2 220 SHRYITERRLPDKAIDLIDEAAARLRMAL 248 (387)
T ss_dssp HHHHCCSSCTHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 02366656670468899999999998641
No 20
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.24 E-value=7.5e-11 Score=91.39 Aligned_cols=176 Identities=11% Similarity=0.050 Sum_probs=94.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCE----ECCCCC-------CC
Q ss_conf 3355046688775310179533489997545664259987899949999999999789970----016997-------31
Q 003637 447 NIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGI----YTSGKG-------SS 515 (806)
Q Consensus 447 ~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~----~tsg~~-------~~ 515 (806)
.++|+++++..+.-.+..+. . ..|+||+||||+|||++++.+++.+.... .+.... ..
T Consensus 12 diig~~~~~~~L~~~~~~~~--~---------~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (252)
T d1sxje2 12 ALSHNEELTNFLKSLSDQPR--D---------LPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKL 80 (252)
T ss_dssp GCCSCHHHHHHHHTTTTCTT--C---------CCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC----------------
T ss_pred HCCCCHHHHHHHHHHHHCCC--C---------CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 83583999999999997699--8---------785998899999889999999976227642222212344434666311
Q ss_pred CCCC-----EEEEECCCCC-----------------CCCCC-CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEE
Q ss_conf 0054-----1445318888-----------------73100-34520125773122121113899999999998862478
Q 003637 516 AVGL-----TAYVTKDPET-----------------GETVL-ESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQTV 572 (806)
Q Consensus 516 ~~gL-----ta~~~kd~~~-----------------ge~~l-e~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~i 572 (806)
..+. .......... ..... ...........+++|||+|.|....+..|+..||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~~~~~~~l~~~~e~~-- 158 (252)
T d1sxje2 81 ELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKY-- 158 (252)
T ss_dssp --CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSCHHHHHHHHHHHHHS--
T ss_pred HHHHCCCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCC--
T ss_conf 221104776310000104457752243102234343310012114666787249994243334543111221002213--
Q ss_pred EEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 97003435630673179970289998788777500011389622692014555406799689999999999863049998
Q 003637 573 SIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPEN 652 (806)
Q Consensus 573 si~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~ 652 (806)
+..+.+|+++|.. -.+++++.+||..+ -+..
T Consensus 159 -----------~~~~~~Il~tn~~-------------~~i~~~l~sR~~~i--~~~~----------------------- 189 (252)
T d1sxje2 159 -----------SKNIRLIMVCDSM-------------SPIIAPIKSQCLLI--RCPA----------------------- 189 (252)
T ss_dssp -----------TTTEEEEEEESCS-------------CSSCHHHHTTSEEE--ECCC-----------------------
T ss_pred -----------CCCCCCEEEECCC-------------CCHHHHHHCCHHEE--EECC-----------------------
T ss_conf -----------5664300010211-------------10025442100024--3035-----------------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHH
Q ss_conf 65788999999999999996089-99999999999999
Q 003637 653 SEQGVLDLATLTAYVSYARKHIH-PKLSDEAAEELTRG 689 (806)
Q Consensus 653 ~~~~~i~~~~lk~yi~~ar~~~~-p~ls~ea~~~L~~~ 689 (806)
++.+.+++++....+... +..++++.+.|...
T Consensus 190 -----~~~~~~~~~l~~i~~~e~~~~~~~~~l~~i~~~ 222 (252)
T d1sxje2 190 -----PSDSEISTILSDVVTNERIQLETKDILKRIAQA 222 (252)
T ss_dssp -----CCHHHHHHHHHHHHHHHTCEECCSHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf -----330468999999999839998969999999998
No 21
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.20 E-value=9.2e-11 Score=90.76 Aligned_cols=212 Identities=12% Similarity=0.044 Sum_probs=115.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCE-----ECCCCCCC--CCCCEEEEEC----CCCCCCCCCC-CCC-----CCCCC
Q ss_conf 259987899949999999999789970-----01699731--0054144531----8888731003-452-----01257
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGI-----YTSGKGSS--AVGLTAYVTK----DPETGETVLE-SGA-----LVLSD 543 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~-----~tsg~~~~--~~gLta~~~k----d~~~ge~~le-~Ga-----l~lad 543 (806)
|+||+|+||||||++++.+++.+.... +....... ...+...... ....+..... ... .....
T Consensus 45 ~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (276)
T d1fnna2 45 RATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDL 124 (276)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTC
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
T ss_conf 16888989998999999999997544688578732300112466654567764334555325435789999998752065
Q ss_pred CCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 73122121113899999999998862478970034356306731799702899987887775000113896226920145
Q 003637 544 RGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLI 623 (806)
Q Consensus 544 ~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDli 623 (806)
.....+|++|.+.......+...++.... .....+.+++++|.... .-.+.+.+.+|+-..
T Consensus 125 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~~~~~~----------~~~~~~~~~~r~~~~ 185 (276)
T d1fnna2 125 YMFLVLDDAFNLAPDILSTFIRLGQEADK---------LGAFRIALVIVGHNDAV----------LNNLDPSTRGIMGKY 185 (276)
T ss_dssp CEEEEEETGGGSCHHHHHHHHHHTTCHHH---------HSSCCEEEEEEESSTHH----------HHTSCHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCC---------CCCCCEEEEECCCCHHH----------HHHCCHHHHHHHCCH
T ss_conf 43320368887535431068888740443---------35652488625876454----------431130366551101
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 55406799689999999999863049998657889999999999999960899999999999999999988349999999
Q 003637 624 YLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSS 703 (806)
Q Consensus 624 f~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ea~~~L~~~y~~lR~~~~~~~~~ 703 (806)
.+.+..++.+.-..+..+.+.. ......+++++.+.|.+....-.......|
T Consensus 186 ~i~~~~~~~~e~~~il~~r~~~--------------------------~~~~~~~~~~~l~~ia~~~~~~~~~~~~~G-- 237 (276)
T d1fnna2 186 VIRFSPYTKDQIFDILLDRAKA--------------------------GLAEGSYSEDILQMIADITGAQTPLDTNRG-- 237 (276)
T ss_dssp EEECCCCBHHHHHHHHHHHHHH--------------------------HBCTTSSCHHHHHHHHHHHSBSSTTCTTSC--
T ss_pred HCCCCCHHHHHHHHHHHHHHHH--------------------------HCCCCCCCHHHHHHHHHHHHHHHHHHHCCC--
T ss_conf 1034412388899999999998--------------------------524566637899999997001444655389--
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 862335999999999999999997369978976599999999
Q 003637 704 KKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEAFRLL 745 (806)
Q Consensus 704 ~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~ai~l~ 745 (806)
.+|...++++.|...|..+.+..|+.+||.+|..-+
T Consensus 238 ------~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~~~ 273 (276)
T d1fnna2 238 ------DARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEV 273 (276)
T ss_dssp ------CHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf ------999999999999999998189984999999999998
No 22
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.19 E-value=6.7e-10 Score=84.66 Aligned_cols=146 Identities=18% Similarity=0.252 Sum_probs=81.5
Q ss_pred CCCEEECCCCCCCC------------HHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 77312212111389------------999999999886247897003435630673179970289998788777500011
Q 003637 543 DRGICCIDEFDKMS------------ESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENI 610 (806)
Q Consensus 543 d~GIl~IDEidkl~------------~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i 610 (806)
.+|+.++||+++.. +..+..|+..+|..++.. +.|...+-. ..++++.-+..- +..
T Consensus 249 ~~~~~~~dei~k~~~~~~~~g~d~~~eg~~~~ll~~~e~~~v~~-~~~~~~~~~--~l~i~~~~~~~~---------~~~ 316 (443)
T d1g41a_ 249 QNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVST-KHGMVKTDH--ILFIASGAFQVA---------RPS 316 (443)
T ss_dssp HHCEEEEETGGGGSCCSSCSSSHHHHHHHHHHHHHHHHCCEEEE-TTEEEECTT--CEEEEEECCSSC---------CGG
T ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCCCCCC--HHHCCCCCHHHC---------CCC
T ss_conf 26755542233443035677877430013454432014665455-566445421--000146522221---------544
Q ss_pred CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCCCCHHHHHHHHHH
Q ss_conf 38962269201455540679968999999999986304999865788999999999999996-08999999999999999
Q 003637 611 HLPPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARK-HIHPKLSDEAAEELTRG 689 (806)
Q Consensus 611 ~lp~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~-~~~p~ls~ea~~~L~~~ 689 (806)
.+-|-|..||.++. .++.-+++....| +.. + .. ..+++|...-.. .+.-.++++|.+.+.+.
T Consensus 317 gliPEliGRlPi~v-~L~~L~~~dL~rI----LtE----P------kn--sLikQy~~lf~~~gv~L~ft~~al~~iA~~ 379 (443)
T d1g41a_ 317 DLIPELQGRLPIRV-ELTALSAADFERI----LTE----P------HA--SLTEQYKALMATEGVNIAFTTDAVKKIAEA 379 (443)
T ss_dssp GSCHHHHTTCCEEE-ECCCCCHHHHHHH----HHS----S------TT--CHHHHHHHHHHTTTCEEEECHHHHHHHHHH
T ss_pred CCHHHHCCCEEEEE-ECCCCCHHHHHHH----HHH----H------HH--HHHHHHHHHHHHCCCEEEECHHHHHHHHHH
T ss_conf 32153346358999-7467449999999----872----4------42--289999999863596799747999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9998834999999986233599999999999999999
Q 003637 690 YVEMRRRGNFPGSSKKVITATPRQIESLIRLSEALAR 726 (806)
Q Consensus 690 y~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~ 726 (806)
..++...... +.+|.|.+++.-.-.-+.
T Consensus 380 A~~~n~~~~~---------~GAR~Lr~i~E~~l~~~~ 407 (443)
T d1g41a_ 380 AFRVNEKTEN---------IGARRLHTVMERLMDKIS 407 (443)
T ss_dssp HHHHHHHSCC---------CGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCC---------CCCHHHHHHHHHHHHHHH
T ss_conf 9985433346---------786188999999989874
No 23
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.14 E-value=1.3e-11 Score=96.79 Aligned_cols=132 Identities=16% Similarity=0.240 Sum_probs=79.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCC--CCCCCCCCCEEECCCCCCCCHH
Q ss_conf 25998789994999999999978997001699731005414453188887310034--5201257731221211138999
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKDPETGETVLES--GALVLSDRGICCIDEFDKMSES 558 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd~~~ge~~le~--Gal~lad~GIl~IDEidkl~~~ 558 (806)
+|||+|+||||||.+++++++.+...++. +.+...........+..++. ........++++|||+|.+-..
T Consensus 43 giLL~Gp~GtGKT~l~~ala~~~~~~~~~-------~~~~~l~~~~~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~ 115 (265)
T d1r7ra3 43 GVLFYGPPGCGKTLLAKAIANECQANFIS-------IKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 115 (265)
T ss_dssp EEEEBCCTTSSHHHHHHHHHHHTTCEEEE-------ECHHHHHTSCTTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCH
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCEEE-------EEHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCC
T ss_conf 57887899876304778878771894799-------88799525316515899999999998639843568754632455
Q ss_pred H--------------HHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--CCHH
Q ss_conf 9--------------99999988624789700343563067317997028999878877750001138962269--2014
Q 003637 559 A--------------RSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLS--RFDL 622 (806)
Q Consensus 559 ~--------------q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~lls--RFDl 622 (806)
. .+.|+..|+. .. -+.++.+|||+|.. -.|++++++ |||.
T Consensus 116 ~~~~~~~~~~~~~~~~~~ll~~l~~---------~~--~~~~v~vi~ttn~~-------------~~ld~al~r~gRf~~ 171 (265)
T d1r7ra3 116 RGGNIGDGGGAADRVINQILTEMDG---------MS--TKKNVFIIGATNRP-------------DIIDPAILRPGRLDQ 171 (265)
T ss_dssp HHHCCCTTHHHHHHHHHHHHHTCC-----------------CCEEEECCBSC-------------TTTSCGGGSSTTSEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHC---------CC--CCCCEEEEEECCCC-------------HHCCHHHHCCCCCCE
T ss_conf 7876788737999999999999628---------67--77998999917992-------------227997807877647
Q ss_pred HHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 5554067996899999999998
Q 003637 623 IYLILDKADEQTDRRLAKHIVS 644 (806)
Q Consensus 623 if~l~d~~~~~~d~~la~~il~ 644 (806)
. +-+..|+.+....|.+..+.
T Consensus 172 ~-i~~~~p~~~~R~~il~~~l~ 192 (265)
T d1r7ra3 172 L-IYIPLPDEKSRVAILKANLR 192 (265)
T ss_dssp E-EECCCCCCHHHHHHHHHHTT
T ss_pred E-EEECCHHHHHHHHHHHHHHC
T ss_conf 9-99566078889999999960
No 24
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.00 E-value=1.1e-08 Score=76.05 Aligned_cols=188 Identities=15% Similarity=0.156 Sum_probs=96.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCC--CCCEEEEECCCCCCCCC----CC-CCCCCCCCCCEEECCCCC
Q ss_conf 259987899949999999999789970016997310--05414453188887310----03-452012577312212111
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSA--VGLTAYVTKDPETGETV----LE-SGALVLSDRGICCIDEFD 553 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~--~gLta~~~kd~~~ge~~----le-~Gal~lad~GIl~IDEid 553 (806)
|+||+||||||||++++++++.....++....+... ..+............+. .. ..........++++||++
T Consensus 54 ~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~ 133 (253)
T d1sxja2 54 AAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVD 133 (253)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECC
T ss_conf 49998799998889999999998751201344322116889999988763121210133432014556651377763011
Q ss_pred CCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHH
Q ss_conf 38999999999988624789700343563067317997028999878877750001138962269201455540679968
Q 003637 554 KMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQ 633 (806)
Q Consensus 554 kl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~ 633 (806)
.+....+..+...++.-.- ....+++++|... .....++.+|+..+ .+..++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~------------~~~~ii~i~~~~~------------~~~~~~l~~~~~~i--~f~~~~-- 185 (253)
T d1sxja2 134 GMSGGDRGGVGQLAQFCRK------------TSTPLILICNERN------------LPKMRPFDRVCLDI--QFRRPD-- 185 (253)
T ss_dssp GCCTTSTTHHHHHHHHHHH------------CSSCEEEEESCTT------------SSTTGGGTTTSEEE--ECCCCC--
T ss_pred CCCCCHHHHHHHHHHHHCC------------CCCCCCCCCCCCC------------CCCCCCCCCEEEEE--ECCCCC--
T ss_conf 1110001346777654012------------3422211135555------------21135324403653--114531--
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
Q ss_conf 99999999998630499986578899999999999999608999999999999999999883499999998623359999
Q 003637 634 TDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQ 713 (806)
Q Consensus 634 ~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~ 713 (806)
.+.+++++........-.+++++.+.|.+.. .| .+|.
T Consensus 186 --------------------------~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s---------~G--------DiR~ 222 (253)
T d1sxja2 186 --------------------------ANSIKSRLMTIAIREKFKLDPNVIDRLIQTT---------RG--------DIRQ 222 (253)
T ss_dssp --------------------------HHHHHHHHHHHHHHHTCCCCTTHHHHHHHHT---------TT--------CHHH
T ss_pred --------------------------HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC---------CC--------CHHH
T ss_conf --------------------------4678899999999809999999999999967---------97--------0999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 9999999999999736997897659999999
Q 003637 714 IESLIRLSEALARIRLSELVEKHDVEEAFRL 744 (806)
Q Consensus 714 Leslirla~a~A~l~l~~~V~~~Dv~~ai~l 744 (806)
+.+.+. +.+. ..+.++.+++.+...-
T Consensus 223 ai~~L~---~~~~--~~~~i~~~~~~~~~~~ 248 (253)
T d1sxja2 223 VINLLS---TIST--TTKTINHENINEISKA 248 (253)
T ss_dssp HHHHHT---HHHH--HSSCCCTTHHHHHHHH
T ss_pred HHHHHH---HHHH--CCCCCCHHHHHHHHCH
T ss_conf 999999---9997--5998899999999650
No 25
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=98.90 E-value=2.3e-10 Score=87.93 Aligned_cols=116 Identities=14% Similarity=0.203 Sum_probs=63.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC---CCCCEEECCCCCCC--
Q ss_conf 2599878999499999999997899700169973100541445318888731003452012---57731221211138--
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKDPETGETVLESGALVL---SDRGICCIDEFDKM-- 555 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd~~~ge~~le~Gal~l---ad~GIl~IDEidkl-- 555 (806)
.|||+||||||||.+++++++.+...++.-..+....|.... .....+. ..+.. ...+|+||||+|++
T Consensus 42 ~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~------~~~~~i~-~if~~A~~~~p~il~iDEid~l~~ 114 (246)
T d1d2na_ 42 SVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSET------AKCQAMK-KIFDDAYKSQLSCVVVDDIERLLD 114 (246)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHH------HHHHHHH-HHHHHHHTSSEEEEEECCHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC------CHHHHHH-HHHHHHHHCCCCEEEHHHHHHHHH
T ss_conf 799889699988999999862010023334565223565421------1224444-456555532422233102566765
Q ss_pred --------CHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHH
Q ss_conf --------9999999999886247897003435630673179970289998788777500011389-6226920145554
Q 003637 556 --------SESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLP-PTLLSRFDLIYLI 626 (806)
Q Consensus 556 --------~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp-~~llsRFDlif~l 626 (806)
.......|+..|+... ....++.+|||+|... .++ +.+.+|||..+.+
T Consensus 115 ~~~~~~~~~~~~~~~ll~~l~~~~----------~~~~~v~vi~tTn~~~-------------~ld~~~~~~rF~~~i~~ 171 (246)
T d1d2na_ 115 YVPIGPRFSNLVLQALLVLLKKAP----------PQGRKLLIIGTTSRKD-------------VLQEMEMLNAFSTTIHV 171 (246)
T ss_dssp CBTTTTBCCHHHHHHHHHHTTCCC----------STTCEEEEEEEESCHH-------------HHHHTTCTTTSSEEEEC
T ss_pred HCCCCCCHHHHHHHHHHHHHCCCC----------CCCCCEEEEECCCCHH-------------HCCCHHHCCCCCEEEEC
T ss_conf 134544124789999999860777----------6545014553248832-------------25610201866338855
No 26
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.85 E-value=4.6e-08 Score=71.64 Aligned_cols=147 Identities=15% Similarity=0.136 Sum_probs=85.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEE----CCCCCCC--------CCCCEEEEECCCCCCCCC-------CCC--CCC
Q ss_conf 2599878999499999999997899700----1699731--------005414453188887310-------034--520
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIY----TSGKGSS--------AVGLTAYVTKDPETGETV-------LES--GAL 539 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~----tsg~~~~--------~~gLta~~~kd~~~ge~~-------le~--Gal 539 (806)
.+||+|+||+||+++++.+++.+--... .++...+ ..++..... +...+... .+. ..-
T Consensus 26 ~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~i~~~~ir~l~~~~~~~~ 104 (207)
T d1a5ta2 26 ALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP-EKGKNTLGVDAVREVTEKLNEHA 104 (207)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECC-CTTCSSBCHHHHHHHHHHTTSCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH-HHCCCCCCCCHHHHHHHHHHHCC
T ss_conf 79888999875999999999821010123212233420155654303431101234-31345333211467765321100
Q ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12577312212111389999999999886247897003435630673179970289998788777500011389622692
Q 003637 540 VLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSR 619 (806)
Q Consensus 540 ~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsR 619 (806)
..+...+++|||+|.|+.+.|++|+..||+- +..+.+|.++|. .-.+.+++.||
T Consensus 105 ~~~~~kviIide~d~l~~~a~n~Llk~lEep-------------~~~~~fIl~t~~-------------~~~ll~tI~SR 158 (207)
T d1a5ta2 105 RLGGAKVVWVTDAALLTDAAANALLKTLEEP-------------PAETWFFLATRE-------------PERLLATLRSR 158 (207)
T ss_dssp TTSSCEEEEESCGGGBCHHHHHHHHHHHTSC-------------CTTEEEEEEESC-------------GGGSCHHHHTT
T ss_pred CCCCCCEEEECHHHHHHHHHHHHHHHHHHHH-------------CCCCEEEEEECC-------------HHHHHHHHCCE
T ss_conf 3576404773134420000149999999850-------------111104553068-------------65510320021
Q ss_pred CHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 0145554067996899999999998630499986578899999999999999608999999999999999
Q 003637 620 FDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPKLSDEAAEELTRG 689 (806)
Q Consensus 620 FDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ea~~~L~~~ 689 (806)
+-.+ ....++.+.+.+++. +.. .+++++.+.+.+.
T Consensus 159 c~~i------------------------------~~~~~~~~~~~~~L~---~~~--~~~~~~~~~i~~~ 193 (207)
T d1a5ta2 159 CRLH------------------------------YLAPPPEQYAVTWLS---REV--TMSQDALLAALRL 193 (207)
T ss_dssp SEEE------------------------------ECCCCCHHHHHHHHH---HHC--CCCHHHHHHHHHH
T ss_pred EEEE------------------------------ECCCCCHHHHHHHHH---HCC--CCCHHHHHHHHHH
T ss_conf 5788------------------------------268999999999999---748--9999999999997
No 27
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=98.83 E-value=2.1e-09 Score=81.06 Aligned_cols=208 Identities=16% Similarity=0.089 Sum_probs=105.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCC--CCCEEEEE--------------CCCCCCCCCCCC-CCC----
Q ss_conf 259987899949999999999789970016997310--05414453--------------188887310034-520----
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSA--VGLTAYVT--------------KDPETGETVLES-GAL---- 539 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~--~gLta~~~--------------kd~~~ge~~le~-Gal---- 539 (806)
+++++||||||||.+++++++.+............. .++..... .....+...... ..+
T Consensus 48 ~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 127 (287)
T d1w5sa2 48 IYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNL 127 (287)
T ss_dssp EEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89967899989999999999998754155567841663033334650467888765304323334512788999999999
Q ss_pred -CCCCCCEEECCCCCCCC------HHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf -12577312212111389------99999999988624789700343563067317997028999878877750001138
Q 003637 540 -VLSDRGICCIDEFDKMS------ESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHL 612 (806)
Q Consensus 540 -~lad~GIl~IDEidkl~------~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~l 612 (806)
......++++||+|.+. .+....|...++...- ......+.+++.+|..... . .-...
T Consensus 128 ~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~--------~~~~~~~~~i~i~~~~~~~-----~--~~~~~ 192 (287)
T d1w5sa2 128 YVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPS--------RDGVNRIGFLLVASDVRAL-----S--YMREK 192 (287)
T ss_dssp HHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCC--------TTSCCBEEEEEEEEETHHH-----H--HHHHH
T ss_pred HHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCH--------HHCCCCEEEEEECCCHHHH-----H--HHHHH
T ss_conf 8546766541257888515665542678988999874320--------1045651477624308999-----9--99862
Q ss_pred CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH-HC-CCCCCCHHHHHHHHHHH
Q ss_conf 96226920145554067996899999999998630499986578899999999999999-60-89999999999999999
Q 003637 613 PPTLLSRFDLIYLILDKADEQTDRRLAKHIVSLHFENPENSEQGVLDLATLTAYVSYAR-KH-IHPKLSDEAAEELTRGY 690 (806)
Q Consensus 613 p~~llsRFDlif~l~d~~~~~~d~~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar-~~-~~p~ls~ea~~~L~~~y 690 (806)
.+.+.+||+.. + ....++.+.+..++..-. .. ....+++++.+.+.+..
T Consensus 193 ~~~~~~r~~~~-i----------------------------~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~ 243 (287)
T d1w5sa2 193 IPQVESQIGFK-L----------------------------HLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVY 243 (287)
T ss_dssp CHHHHTTCSEE-E----------------------------ECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHH
T ss_pred CCCHHCCCCEE-E----------------------------ECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 52011232206-5----------------------------225775999999876667775246877999999999997
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 99883499999998623359999999999999999973699789765999999
Q 003637 691 VEMRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSELVEKHDVEEAFR 743 (806)
Q Consensus 691 ~~lR~~~~~~~~~~~~~~it~R~Leslirla~a~A~l~l~~~V~~~Dv~~ai~ 743 (806)
..... .. -.+|....+++.|...|..+.+..|+.+||.+|+.
T Consensus 244 ~~~~~---~~--------gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~ 285 (287)
T d1w5sa2 244 GEDKG---GD--------GSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVS 285 (287)
T ss_dssp CGGGT---SC--------CCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred HCCCC---CC--------CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 23036---78--------89999999999999999984999879999999984
No 28
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.70 E-value=1.4e-09 Score=82.45 Aligned_cols=154 Identities=19% Similarity=0.228 Sum_probs=93.1
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCE---ECCCCCCCCCCCEEE
Q ss_conf 63355046688775310179533489997545664259987899949999999999789970---016997310054144
Q 003637 446 PNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLSPRGI---YTSGKGSSAVGLTAY 522 (806)
Q Consensus 446 P~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~pr~~---~tsg~~~~~~gLta~ 522 (806)
..++|+++....+.-.|....+ -|++|+|+||+|||.+++.+++....+. .-.++......+...
T Consensus 22 d~~igRd~Ei~~l~~iL~r~~k------------~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~L 89 (195)
T d1jbka_ 22 DPVIGRDEEIRRTIQVLQRRTK------------NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGAL 89 (195)
T ss_dssp CCCCSCHHHHHHHHHHHTSSSS------------CEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCC------------CCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHHH
T ss_conf 9872809999999999953588------------8739983587544799999999998089997881856999669998
Q ss_pred EECCCCCCCCCCCCCC----CCCCC-CCEEECCCCCCCCHH--------HHHHHHHHHHHCEEEEEECCEEEEECCCEEE
Q ss_conf 5318888731003452----01257-731221211138999--------9999999886247897003435630673179
Q 003637 523 VTKDPETGETVLESGA----LVLSD-RGICCIDEFDKMSES--------ARSMLHEVMEQQTVSIAKAGIIASLNARTSV 589 (806)
Q Consensus 523 ~~kd~~~ge~~le~Ga----l~lad-~GIl~IDEidkl~~~--------~q~~L~e~mE~q~isi~kag~~~~l~~r~si 589 (806)
+......|+|.-+.-. +.... +.|+||||++.+-.. .-+.|..+|+.+. ..+
T Consensus 90 iAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~rg~---------------l~~ 154 (195)
T d1jbka_ 90 VAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGE---------------LHC 154 (195)
T ss_dssp HTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHHTTS---------------CCE
T ss_pred HCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHHCCC---------------CEE
T ss_conf 64587407799999999998731798089972608998437877775238999999985799---------------549
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHH
Q ss_conf 97028999878877750001138962269201455540679968999
Q 003637 590 LACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDR 636 (806)
Q Consensus 590 IaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~ 636 (806)
|+++.|.+.+ +.+.-.++|.+||..+ .++.|+.+.-.
T Consensus 155 IgatT~eey~--------~~~e~d~aL~rrF~~I--~V~Ep~~e~t~ 191 (195)
T d1jbka_ 155 VGATTLDEYR--------QYIEKDAALERRFQKV--FVAEPSVEDTI 191 (195)
T ss_dssp EEEECHHHHH--------HHTTTCHHHHTTEEEE--ECCCCCHHHHH
T ss_pred EECCCHHHHH--------HHHHCCHHHHHCCCEE--ECCCCCHHHHH
T ss_conf 8518999999--------9987388999639875--45898989999
No 29
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=98.61 E-value=1e-10 Score=90.51 Aligned_cols=140 Identities=11% Similarity=0.076 Sum_probs=69.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-CCC-CCCEEECCCCCCCCHH
Q ss_conf 25998789994999999999978997001699731005414453188887310034520-125-7731221211138999
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKDPETGETVLESGAL-VLS-DRGICCIDEFDKMSES 558 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd~~~ge~~le~Gal-~la-d~GIl~IDEidkl~~~ 558 (806)
++|++||||||||.+++++|..+... .++..+..+..+. .+.|+..-....+ ..| ...|+||||||.+...
T Consensus 125 ~~l~~G~pG~GKT~la~ala~~~~~~-----~~~~~~~~~~~~~--~~~G~~e~~~~~~f~~a~~~~ilf~DEid~~~~~ 197 (321)
T d1w44a_ 125 MVIVTGKGNSGKTPLVHALGEALGGK-----DKYATVRFGEPLS--GYNTDFNVFVDDIARAMLQHRVIVIDSLKNVIGA 197 (321)
T ss_dssp EEEEECSSSSCHHHHHHHHHHHHHTT-----SCCEEEEBSCSST--TCBCCHHHHHHHHHHHHHHCSEEEEECCTTTC--
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCC-----CCEEEEEHHHHHH--CCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHCCC
T ss_conf 38887799850889999999986379-----9808978268544--2444578999999999862658974101222123
Q ss_pred HHHHHHHHHHHCEEEEE---ECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHH
Q ss_conf 99999998862478970---034356306731799702899987887775000113896226920145554067996899
Q 003637 559 ARSMLHEVMEQQTVSIA---KAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTD 635 (806)
Q Consensus 559 ~q~~L~e~mE~q~isi~---kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d 635 (806)
........+.++.++.- -.|. ..+..+.+|||+||.... +.+..+.....|||.. +..+.|+.+..
T Consensus 198 r~~~~~~~~~~r~v~~lL~e~dg~--~~~~~v~viaatN~~~~~--------~~i~~~~~r~~Rf~~~-v~v~~pd~~~r 266 (321)
T d1w44a_ 198 AGGNTTSGGISRGAFDLLSDIGAM--AASRGCVVIASLNPTSND--------DKIVELVKEASRSNST-SLVISTDVDGE 266 (321)
T ss_dssp ---------CCHHHHHHHHHHHHH--HHHHTCEEEEECCCCCCC--------HHHHHHHHHHHHHSCS-EEEEECSSTTE
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCC--CCCCCEEEEEECCCCCCC--------CCHHHHHHCCCCCCCE-EECCCCCHHHH
T ss_conf 456789874133451566520355--667884999837976353--------1010233365755542-11589886789
Q ss_pred HHH
Q ss_conf 999
Q 003637 636 RRL 638 (806)
Q Consensus 636 ~~l 638 (806)
..|
T Consensus 267 ~~i 269 (321)
T d1w44a_ 267 WQV 269 (321)
T ss_dssp EEE
T ss_pred HHH
T ss_conf 999
No 30
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=98.55 E-value=4.6e-08 Score=71.62 Aligned_cols=29 Identities=17% Similarity=0.160 Sum_probs=25.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEEC
Q ss_conf 25998789994999999999978997001
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYT 509 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~t 509 (806)
.+||+||||||||.+++.+++.+...++.
T Consensus 156 ~~~~~g~~~~gk~~~~~~~~~~~~~~~i~ 184 (362)
T d1svma_ 156 YWLFKGPIDSGKTTLAAALLELCGGKALN 184 (362)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 69998999988899999999985997899
No 31
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.38 E-value=6.3e-07 Score=63.61 Aligned_cols=171 Identities=18% Similarity=0.194 Sum_probs=89.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCC--CCCCCCCCCCCCCCCCCCEEECCCCCCCC--
Q ss_conf 25998789994999999999978997001699731005414453188--88731003452012577312212111389--
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKDP--ETGETVLESGALVLSDRGICCIDEFDKMS-- 556 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd~--~~ge~~le~Gal~lad~GIl~IDEidkl~-- 556 (806)
+++|+|+||+|||.|++++++.+.+. +................ .......+. .-......++|||+++.+.
T Consensus 38 ~l~l~G~~G~GKTHLl~A~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dll~iDDi~~i~~~ 112 (213)
T d1l8qa2 38 PIFIYGSVGTGKTHLLQAAGNEAKKR----GYRVIYSSADDFAQAMVEHLKKGTINEF-RNMYKSVDLLLLDDVQFLSGK 112 (213)
T ss_dssp SEEEECSSSSSHHHHHHHHHHHHHHT----TCCEEEEEHHHHHHHHHHHHHHTCHHHH-HHHHHTCSEEEEECGGGGTTC
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCC----CCCEEEECHHHHHHHHHHHHHCCCHHHH-HHHHHHCCCHHHHHHHHHCCC
T ss_conf 57998889983999999999874467----6504884437879999999871662667-898762130101126550586
Q ss_pred HHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHH
Q ss_conf 99999999988624789700343563067317997028999878877750001138962269201455540679968999
Q 003637 557 ESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDR 636 (806)
Q Consensus 557 ~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~ 636 (806)
+..+..|...++... .....+|.+++.....++ .+.+.|.||+.-..++.=.|+.
T Consensus 113 ~~~~~~lf~lin~~~------------~~~~~iiits~~~p~~l~---------~~~~dL~SRL~~g~~~~i~p~d---- 167 (213)
T d1l8qa2 113 ERTQIEFFHIFNTLY------------LLEKQIILASDRHPQKLD---------GVSDRLVSRFEGGILVEIELDN---- 167 (213)
T ss_dssp HHHHHHHHHHHHHHH------------HTTCEEEEEESSCGGGCT---------TSCHHHHHHHHTSEEEECCCCH----
T ss_pred HHHHHHHHHHHHHHH------------HCCCEEEEECCCCCHHCC---------CCCHHHHHHHHCCEEEEECCCC----
T ss_conf 577889999999876------------316638995487510013---------4326788886185689978882----
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99999998630499986578899999999999999608999999999999999999883499999998623359999999
Q 003637 637 RLAKHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIHPKLSDEAAEELTRGYVEMRRRGNFPGSSKKVITATPRQIES 716 (806)
Q Consensus 637 ~la~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~p~ls~ea~~~L~~~y~~lR~~~~~~~~~~~~~~it~R~Les 716 (806)
+...+++...-+.....+++++.++|.+.. -++|+|++
T Consensus 168 ------------------------~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~------------------~~~R~L~~ 205 (213)
T d1l8qa2 168 ------------------------KTRFKIIKEKLKEFNLELRKEVIDYLLENT------------------KNVREIEG 205 (213)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCCCCHHHHHHHHHHC------------------SSHHHHHH
T ss_pred ------------------------HHHHHHHHHHHHHCCCCCCHHHHHHHHHHC------------------CCHHHHHH
T ss_conf ------------------------799999999999829999999999999856------------------86998999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q 003637 717 LIRLSEA 723 (806)
Q Consensus 717 lirla~a 723 (806)
++...+.
T Consensus 206 ~l~~l~l 212 (213)
T d1l8qa2 206 KIKLIKL 212 (213)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
T ss_conf 9998634
No 32
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.25 E-value=2.4e-06 Score=59.42 Aligned_cols=112 Identities=15% Similarity=0.132 Sum_probs=68.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCC----C--CCCCCCCCCEEECCCCC
Q ss_conf 42599878999499999999997899700169973100541445318888731003----4--52012577312212111
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKDPETGETVLE----S--GALVLSDRGICCIDEFD 553 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd~~~ge~~le----~--Gal~lad~GIl~IDEid 553 (806)
.++||+|+||+||++++..+++....... + ..++-........-|--..+ . -.-..+...|++|||+|
T Consensus 16 ~~~l~~G~~g~gk~~~a~~l~~~i~~~~~---~---h~D~~~i~~~~~~I~Id~IR~i~~~~~~~~~~~~~KviIId~ad 89 (198)
T d2gnoa2 16 ISILINGEDLSYPREVSLELPEYVEKFPP---K---ASDVLEIDPEGENIGIDDIRTIKDFLNYSPELYTRKYVIVHDCE 89 (198)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTSCC---C---TTTEEEECCSSSCBCHHHHHHHHHHHTSCCSSSSSEEEEETTGG
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHCCCC---C---CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 55998898998889999999999843456---7---99889980776789989999999999617545898799994731
Q ss_pred CCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 3899999999998862478970034356306731799702899987887775000113896226920145
Q 003637 554 KMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLI 623 (806)
Q Consensus 554 kl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDli 623 (806)
.|+...+++|+..||+ .+..+.++.++| ..-.+.+++.|||-.+
T Consensus 90 ~l~~~aqNaLLK~LEE-------------Pp~~t~fiLit~-------------~~~~ll~TI~SRC~~i 133 (198)
T d2gnoa2 90 RMTQQAANAFLKALEE-------------PPEYAVIVLNTR-------------RWHYLLPTIKSRVFRV 133 (198)
T ss_dssp GBCHHHHHHTHHHHHS-------------CCTTEEEEEEES-------------CGGGSCHHHHTTSEEE
T ss_pred CCCHHHHHHHHHHHHC-------------CCCCCEEEECCC-------------CHHHCHHHHHCCEEEE
T ss_conf 0366666478887737-------------898852222069-------------9566878873522777
No 33
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=97.47 E-value=0.0025 Score=38.09 Aligned_cols=149 Identities=12% Similarity=0.136 Sum_probs=89.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHH
Q ss_conf 25998789994999999999978997001699731005414453188887310034520125773122121113899999
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSESAR 560 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd~~~ge~~le~Gal~lad~GIl~IDEidkl~~~~q 560 (806)
-++|+|+|+||||.++..+.++++...- +.. ....+.+ -.+.+.-++++||...-.. ..
T Consensus 106 ~~~l~G~~~tGKS~f~~~i~~~lg~~~~--------------~~~--~~~~f~l----~~l~~k~~~~~~e~~~~~~-~~ 164 (267)
T d1u0ja_ 106 TIWLFGPATTGKTNIAEAIAHTVPFYGC--------------VNW--TNENFPF----NDCVDKMVIWWEEGKMTAK-VV 164 (267)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSCEEE--------------CCT--TCSSCTT----GGGSSCSEEEECSCCEETT-TH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCHHH--------------CCC--CCCCCCC----CCCCCCEEEEEECCCCCCC-HH
T ss_conf 9999858988778999999998362020--------------026--6788622----0037987999838885300-78
Q ss_pred HHHHHHHHHCEEEEE-ECCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHH
Q ss_conf 999998862478970-0343563067317997028999878877750001138962269201455540679968999999
Q 003637 561 SMLHEVMEQQTVSIA-KAGIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRFDLIYLILDKADEQTDRRLA 639 (806)
Q Consensus 561 ~~L~e~mE~q~isi~-kag~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRFDlif~l~d~~~~~~d~~la 639 (806)
..+..++.-..+++. |......+...+.+|.+.|......+.... ...-..++.+|+-++ .+ +.+
T Consensus 165 ~~~K~l~gGd~i~v~~K~k~~~~~~~~p~li~s~n~i~~~~~~~~~---~~~~~~~l~~R~~~~-~F-~~~--------- 230 (267)
T d1u0ja_ 165 ESAKAILGGSKVRVDQKCKSSAQIDPTPVIVTSNTNMCAVIDGNST---TFEHQQPLQDRMFKF-EL-TRR--------- 230 (267)
T ss_dssp HHHHHHHTTCCEEC------CCEECCCCEEEEESSCTTCEEETTEE---ECTTHHHHHTTEEEE-EC-CSC---------
T ss_pred HHHHHHCCCCCEEEECCCCCCCEEECCEEEEEECCCCCCCCCCCCC---CCCCCHHHHHHEEEE-EC-CCC---------
T ss_conf 9999864899368532038970740770899948976524577866---430025756517998-78-994---------
Q ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 999986304999865788999999999999996089
Q 003637 640 KHIVSLHFENPENSEQGVLDLATLTAYVSYARKHIH 675 (806)
Q Consensus 640 ~~il~~~~~~~~~~~~~~i~~~~lk~yi~~ar~~~~ 675 (806)
-......+..+.++.++.+++....
T Consensus 231 -----------~p~~~~~i~~~e~k~f~~W~~~~~~ 255 (267)
T d1u0ja_ 231 -----------LDHDFGKVTKQEVKDFFRWAKDHVV 255 (267)
T ss_dssp -----------CCTTSCCCCHHHHHHHHHHHHHTCC
T ss_pred -----------CCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf -----------8976687799999999999982574
No 34
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=97.36 E-value=0.0006 Score=42.48 Aligned_cols=110 Identities=18% Similarity=0.240 Sum_probs=66.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHH
Q ss_conf 25998789994999999999978997001699731005414453188887310034520125773122121113899999
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIYTSGKGSSAVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKMSESAR 560 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~tsg~~~~~~gLta~~~kd~~~ge~~le~Gal~lad~GIl~IDEidkl~~~~q 560 (806)
-++|+|||+||||.++..+.+.+...+. +.. .....+.+. .+++..++++||+........
T Consensus 55 ~i~~~GP~~TGKS~f~~sl~~~l~G~vi---------s~~------N~~s~F~Lq----~l~~~kv~l~dD~t~~~~~~~ 115 (205)
T d1tuea_ 55 CLVFCGPANTGKSYFGMSFIHFIQGAVI---------SFV------NSTSHFWLE----PLTDTKVAMLDDATTTCWTYF 115 (205)
T ss_dssp EEEEESCGGGCHHHHHHHHHHHHTCEEC---------CCC------CSSSCGGGG----GGTTCSSEEEEEECHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCEEE---------ECC------CCCCCCCCC----CCCCCEEEEEECCCCCHHHHH
T ss_conf 8999889985689999999998288788---------336------788875366----534786999960553167789
Q ss_pred HH-HHHHHHHCEEEEEEC-CEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99-999886247897003-4356306731799702899987887775000113896226920
Q 003637 561 SM-LHEVMEQQTVSIAKA-GIIASLNARTSVLACANPSGSRYNPRLSVIENIHLPPTLLSRF 620 (806)
Q Consensus 561 ~~-L~e~mE~q~isi~ka-g~~~~l~~r~siIaaaNp~~g~~~~~~~~~~~i~lp~~llsRF 620 (806)
.. |..+++-..+++..- .....+.. +-+|.|+|-.....+.. ..|.+|.
T Consensus 116 d~~lK~ll~G~~vsvd~KhK~~vqi~~-pPliITsN~~~~~~d~~----------~~L~sRi 166 (205)
T d1tuea_ 116 DTYMRNALDGNPISIDRKHKPLIQLKC-PPILLTTNIHPAKDNRW----------PYLESRI 166 (205)
T ss_dssp HHHCHHHHHTCCEEEC----CCEEECC-CCEEEEESSCTTSSSSC----------HHHHTSC
T ss_pred HHHHHHCCCCCEEEEECCCCCCCCCCC-CCEEEECCCCCCCCCCC----------HHHHHEE
T ss_conf 999986228972565213588611258-98899728898856551----------5466517
No 35
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=96.87 E-value=0.00064 Score=42.28 Aligned_cols=26 Identities=31% Similarity=0.471 Sum_probs=23.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
.|||+||||||||++++.++..+...
T Consensus 34 ~ilL~GpPGtGKT~la~~la~~~~~~ 59 (273)
T d1gvnb_ 34 AFLLGGQPGSGKTSLRSAIFEETQGN 59 (273)
T ss_dssp EEEEECCTTSCTHHHHHHHHHHTTTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 99988979988999999999986515
No 36
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=96.64 E-value=0.001 Score=40.84 Aligned_cols=25 Identities=28% Similarity=0.590 Sum_probs=23.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
+|+++|+||+|||+|++.++..++.
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCC
T ss_conf 8999989993899999999814888
No 37
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=96.54 E-value=0.0057 Score=35.58 Aligned_cols=46 Identities=22% Similarity=0.197 Sum_probs=32.2
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 9998215633550466887753101795334899975456642599878999499999999
Q 003637 439 TLTRSLAPNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYI 499 (806)
Q Consensus 439 ~l~~sl~P~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~i 499 (806)
.....++|..-..+.-|.|+...+-++ -+++.|+||||||.++..+
T Consensus 138 ~~~~~~~~~~~~~~~Q~~A~~~al~~~---------------~~vI~G~pGTGKTt~i~~~ 183 (359)
T d1w36d1 138 QTLDKLFPVSDEINWQKVAAAVALTRR---------------ISVISGGPGTGKTTTVAKL 183 (359)
T ss_dssp HHHHTTCCCTTSCCHHHHHHHHHHTBS---------------EEEEECCTTSTHHHHHHHH
T ss_pred HHHHHHCCCCCCCCHHHHHHHHHHCCC---------------EEEEECCCCCCCEEHHHHH
T ss_conf 999974657656638999999997088---------------5999768988752169999
No 38
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.44 E-value=0.0042 Score=36.50 Aligned_cols=24 Identities=25% Similarity=0.566 Sum_probs=22.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
||+|.|+||||||++++.+++.+.
T Consensus 3 ~v~ItG~~GtGKTtl~~~i~~~l~ 26 (189)
T d2i3ba1 3 HVFLTGPPGVGKTTLIHKASEVLK 26 (189)
T ss_dssp CEEEESCCSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 999988999719999999999999
No 39
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=95.16 E-value=0.0086 Score=34.30 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=22.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
.|++.|+||+|||++++.+++.++.
T Consensus 9 ~I~i~G~~GsGKTTla~~La~~~~~ 33 (192)
T d1lw7a2 9 TVAILGGESSGKSVLVNKLAAVFNT 33 (192)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 8999899999899999999998499
No 40
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=95.14 E-value=0.0065 Score=35.18 Aligned_cols=28 Identities=18% Similarity=0.267 Sum_probs=24.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 2599878999499999999997899700
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIY 508 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~ 508 (806)
-|+|.|+||+|||++++.+++..+...+
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 8999899999989999999998099889
No 41
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=95.07 E-value=0.0097 Score=33.93 Aligned_cols=26 Identities=31% Similarity=0.364 Sum_probs=23.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
+|.|+|+||+|||++++.+++.+...
T Consensus 4 ~I~l~G~~GsGKSTvak~La~~L~~~ 29 (169)
T d1kaga_ 4 NIFLVGPMGAGKSTIGRQLAQQLNME 29 (169)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTTCE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 49998999999999999999996999
No 42
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=95.04 E-value=0.011 Score=33.58 Aligned_cols=28 Identities=36% Similarity=0.542 Sum_probs=24.4
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 6642599878999499999999997899
Q 003637 478 GDINILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 478 ~~i~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
.+.+|+|.|+||+|||++++.+++.++.
T Consensus 4 k~~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 4 KGINILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp SSCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 9888999828999889999999998589
No 43
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=94.78 E-value=0.013 Score=33.10 Aligned_cols=50 Identities=16% Similarity=0.098 Sum_probs=35.8
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 56335504668877531017953348999754566425998789994999999999978
Q 003637 445 APNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 445 ~P~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|.+||++.-..-|.-.|....... ...|.++|.+|+|||+||+.+.+..
T Consensus 19 ~~~~~gR~~~~~~i~~~L~~~~~~~---------~~~v~I~GmgGiGKTtLA~~v~~~~ 68 (277)
T d2a5yb3 19 QMTCYIREYHVDRVIKKLDEMCDLD---------SFFLFLHGRAGSGKSVIASQALSKS 68 (277)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHTTSS---------SEEEEEECSTTSSHHHHHHHHHHHC
T ss_pred CCCEECCHHHHHHHHHHHHHCCCCC---------CEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 8862373999999999987346878---------4089997799788899999999855
No 44
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=94.57 E-value=0.012 Score=33.16 Aligned_cols=25 Identities=40% Similarity=0.514 Sum_probs=22.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
+|+|+|+||+|||++++.+++.+.-
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~ 30 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGL 30 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 7989899999989999999999799
No 45
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=94.41 E-value=0.03 Score=30.44 Aligned_cols=26 Identities=19% Similarity=0.057 Sum_probs=22.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
+++++|++|+|||+|++.+++..+..
T Consensus 31 ~i~i~G~~G~GKTsLl~~~~~~~~~~ 56 (283)
T d2fnaa2 31 ITLVLGLRRTGKSSIIKIGINELNLP 56 (283)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHTCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 79998699982999999999977998
No 46
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=94.14 E-value=0.017 Score=32.16 Aligned_cols=26 Identities=15% Similarity=0.229 Sum_probs=23.1
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 64259987899949999999999789
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
+..|+|+|.||+|||++++.+++.+.
T Consensus 6 g~~I~l~G~~GsGKTTia~~La~~L~ 31 (183)
T d1m8pa3 6 GFTIFLTGYMNSGKDAIARALQVTLN 31 (183)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 76999889999999999999999986
No 47
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=93.99 E-value=0.027 Score=30.80 Aligned_cols=28 Identities=21% Similarity=0.398 Sum_probs=24.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 2599878999499999999997899700
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIY 508 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~ 508 (806)
-|+|.|+||+|||++++.+++.++...+
T Consensus 5 iI~l~G~~GsGKsTva~~L~~~l~~~~~ 32 (178)
T d1qhxa_ 5 MIILNGGSSAGKSGIVRCLQSVLPEPWL 32 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSSSCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 9999899999989999999997289969
No 48
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=93.90 E-value=0.02 Score=31.70 Aligned_cols=26 Identities=31% Similarity=0.300 Sum_probs=23.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
||.|+|.||+|||++++.+++.+...
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l~~~ 27 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDLDLV 27 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHTCE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 39998999998899999999983998
No 49
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.62 E-value=0.028 Score=30.65 Aligned_cols=26 Identities=35% Similarity=0.466 Sum_probs=23.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
+|.|+|.||+|||++++.+++.+...
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~ 28 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVG 28 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCC
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 48998899998899999999984998
No 50
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=93.36 E-value=0.029 Score=30.57 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=23.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
+|.|+|.||+|||++++.+++.+...
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~Lg~~ 29 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARALGYE 29 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHHTCE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 88998899998899999999994998
No 51
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=93.25 E-value=0.035 Score=29.99 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=22.3
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 6425998789994999999999978
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
++.|+|+|+||+|||++++.+++..
T Consensus 3 ~~riil~G~pGSGKsT~a~~La~~~ 27 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAPKLAKNF 27 (190)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 6389998999998899999999986
No 52
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=93.18 E-value=0.026 Score=30.95 Aligned_cols=26 Identities=31% Similarity=0.496 Sum_probs=22.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
-|+|.|+||+|||++++.+++.++..
T Consensus 6 iI~l~G~~GsGKSTia~~La~~lg~~ 31 (176)
T d1zp6a1 6 ILLLSGHPGSGKSTIAEALANLPGVP 31 (176)
T ss_dssp EEEEEECTTSCHHHHHHHHHTCSSSC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 99998899998899999999995999
No 53
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=93.18 E-value=0.032 Score=30.25 Aligned_cols=24 Identities=29% Similarity=0.405 Sum_probs=22.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
+|+++|+||+|||++++.+++...
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~ 25 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYG 25 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899988999998999999999879
No 54
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.13 E-value=0.033 Score=30.20 Aligned_cols=24 Identities=25% Similarity=0.459 Sum_probs=22.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.+|+|.|+||+|||++++.+++..
T Consensus 1 m~I~i~G~pGsGKsT~a~~La~~~ 24 (181)
T d2cdna1 1 MRVLLLGPPGAGKGTQAVKLAEKL 24 (181)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 989998899999799999999998
No 55
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=93.00 E-value=0.047 Score=29.08 Aligned_cols=25 Identities=32% Similarity=0.436 Sum_probs=20.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-|+++|+||+|||++++.+.+..+.
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~~~ 28 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKNPG 28 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 9999899999999999999995799
No 56
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=92.61 E-value=0.041 Score=29.51 Aligned_cols=26 Identities=15% Similarity=0.362 Sum_probs=22.9
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 42599878999499999999997899
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
.+|+|.|+||+|||++++.+++...-
T Consensus 4 m~I~i~GppGsGKsT~a~~La~~~~~ 29 (189)
T d1zaka1 4 LKVMISGAPASGKGTQCELIKTKYQL 29 (189)
T ss_dssp CCEEEEESTTSSHHHHHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 29999889999989999999998799
No 57
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=92.59 E-value=0.039 Score=29.61 Aligned_cols=24 Identities=21% Similarity=0.250 Sum_probs=21.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
=++|+|+||+|||++++.+++.+.
T Consensus 8 iivl~G~~GsGKsT~a~~La~~l~ 31 (171)
T d1knqa_ 8 IYVLMGVSGSGKSAVASEVAHQLH 31 (171)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899989999898999999999869
No 58
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.41 E-value=0.023 Score=31.21 Aligned_cols=24 Identities=17% Similarity=0.268 Sum_probs=21.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-|+|+|.||+|||++++.+++.+.
T Consensus 21 vI~L~G~pGSGKTTiAk~La~~l~ 44 (195)
T d1x6va3 21 TVWLTGLSGAGKTTVSMALEEYLV 44 (195)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 999889999999999999999997
No 59
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=92.32 E-value=0.038 Score=29.73 Aligned_cols=24 Identities=33% Similarity=0.425 Sum_probs=22.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
+|+|+|+||+|||++++.+++...
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g 25 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYG 25 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899988999987999999999879
No 60
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.27 E-value=0.044 Score=29.29 Aligned_cols=25 Identities=24% Similarity=0.331 Sum_probs=22.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-|+|+|+||+|||++++.+++...-
T Consensus 10 iI~i~GppGSGKsT~a~~La~~~g~ 34 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCEKLVKDYSF 34 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 8999899999989999999998599
No 61
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=92.17 E-value=0.045 Score=29.22 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=21.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-|+++|+||+|||++++.+++...
T Consensus 8 iI~i~G~pGSGKsT~a~~La~~~g 31 (194)
T d1qf9a_ 8 VVFVLGGPGSGKGTQCANIVRDFG 31 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899989999988999999999979
No 62
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=91.91 E-value=0.18 Score=24.87 Aligned_cols=90 Identities=16% Similarity=0.073 Sum_probs=42.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCC-CCEECCCCCCCC----------CCCEEE-EECC----CCCCCC------CCCCC
Q ss_conf 4259987899949999999999789-970016997310----------054144-5318----888731------00345
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSP-RGIYTSGKGSSA----------VGLTAY-VTKD----PETGET------VLESG 537 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~p-r~~~tsg~~~~~----------~gLta~-~~kd----~~~ge~------~le~G 537 (806)
...++.+++|+|||.++-.+..... +.++..-..... .+.... ...+ ...... .....
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSPITYSTYGKFLADG 88 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEESCHHHHHHHHHHHHHHHSCCCEEECSSCEECCCCSEEEEEHHHHHHTT
T ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
T ss_conf 88999968877999999999998699399976769999999999999852024643001221134422788641000235
Q ss_pred CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 20125773122121113899999999998862
Q 003637 538 ALVLSDRGICCIDEFDKMSESARSMLHEVMEQ 569 (806)
Q Consensus 538 al~lad~GIl~IDEidkl~~~~q~~L~e~mE~ 569 (806)
...+.+-+++++||++.++......+..+++.
T Consensus 89 ~~~~~~~~~vIiDE~H~~~~~~~~~~~~~l~~ 120 (136)
T d1a1va1 89 GCSGGAYDIIICDECHSTDATSILGIGTVLDQ 120 (136)
T ss_dssp GGGGCCCSEEEEETTTCCSHHHHHHHHHHHHH
T ss_pred CHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 30241599999825553588789999999999
No 63
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=91.84 E-value=0.07 Score=27.87 Aligned_cols=25 Identities=24% Similarity=0.418 Sum_probs=22.5
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 4259987899949999999999789
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
..|+|+|+||+|||++++.+++...
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g 31 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFE 31 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 1699988999987999999999979
No 64
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.78 E-value=0.063 Score=28.16 Aligned_cols=24 Identities=21% Similarity=0.351 Sum_probs=21.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
=|+|+|.||+|||++++.+++...
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l~ 27 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYLN 27 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 999989999999999999999997
No 65
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.43 E-value=0.074 Score=27.68 Aligned_cols=24 Identities=25% Similarity=0.504 Sum_probs=22.0
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
..|+|+|+||+|||++++.+++..
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~ 26 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERF 26 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 699998999999899999999996
No 66
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=91.37 E-value=0.27 Score=23.65 Aligned_cols=23 Identities=17% Similarity=0.314 Sum_probs=19.5
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.-|+|+|+||+|||+|+..+..-
T Consensus 14 ~kI~lvG~~~vGKTsLl~~l~~~ 36 (186)
T d1f6ba_ 14 GKLVFLGLDNAGKTTLLHMLKDD 36 (186)
T ss_dssp EEEEEEEETTSSHHHHHHHHSCC
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 78999999998989999999678
No 67
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=91.31 E-value=0.057 Score=28.47 Aligned_cols=24 Identities=29% Similarity=0.407 Sum_probs=21.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-|+|+|+||+|||++++.+++...
T Consensus 10 iI~l~G~pGSGKsT~a~~La~~~g 33 (194)
T d3adka_ 10 IIFVVGGPGSGKGTQCEKIVQKYG 33 (194)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899989999987999999999869
No 68
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.04 E-value=0.079 Score=27.49 Aligned_cols=23 Identities=22% Similarity=0.379 Sum_probs=21.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|++.|+||+|||++++.+++..
T Consensus 3 iI~i~GppGSGKsT~a~~La~~~ 25 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCARIVEKY 25 (194)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99997999999899999999986
No 69
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=90.89 E-value=0.059 Score=28.39 Aligned_cols=25 Identities=28% Similarity=0.388 Sum_probs=22.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
+|+|+|+||.|||++++.+++...-
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~ 26 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGI 26 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 8999879999989999999998699
No 70
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=90.82 E-value=0.16 Score=25.21 Aligned_cols=26 Identities=23% Similarity=0.609 Sum_probs=24.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
|||+.|++|+|||++++++....|..
T Consensus 168 nili~G~tgSGKTT~l~al~~~i~~~ 193 (323)
T d1g6oa_ 168 NVIVCGGTGSGKTTYIKSIMEFIPKE 193 (323)
T ss_dssp CEEEEESTTSSHHHHHHHHGGGSCTT
T ss_pred CEEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 88999403566257899986530145
No 71
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.73 E-value=0.3 Score=23.35 Aligned_cols=23 Identities=35% Similarity=0.541 Sum_probs=19.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|+++|++|+|||+|+..+..--
T Consensus 8 KivvvG~~~vGKTsli~~l~~~~ 30 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDDT 30 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999909899999996198
No 72
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.68 E-value=0.32 Score=23.17 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=19.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-|+++|++|+|||+|++.+..-
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999993989999999829
No 73
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.45 E-value=0.15 Score=25.45 Aligned_cols=26 Identities=35% Similarity=0.521 Sum_probs=23.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
+|.|+||+|+||++|++.+.+..|..
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~~~~ 28 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEYPDS 28 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 69998999999899999999748866
No 74
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=90.39 E-value=0.12 Score=26.20 Aligned_cols=25 Identities=24% Similarity=0.450 Sum_probs=21.4
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 6425998789994999999999978
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.+.|+|+|+||+|||+|++.+..--
T Consensus 5 e~kI~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 5 EMRILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHSS
T ss_pred CEEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 3299999999989999999996798
No 75
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=90.13 E-value=0.11 Score=26.43 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=20.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
+.|+++|+||+|||+|++.+..--
T Consensus 1 ikivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 1 MRILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 989999999989899999996598
No 76
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=90.03 E-value=0.076 Score=27.62 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=21.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
=|.+.||||+||+++++.+++.+.-.
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~ 30 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWH 30 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 89977999889899999999996990
No 77
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.91 E-value=0.074 Score=27.68 Aligned_cols=25 Identities=28% Similarity=0.288 Sum_probs=19.9
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 6642599878999499999999997
Q 003637 478 GDINILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 478 ~~i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
...=|+++|.||+|||++++.++..
T Consensus 13 ~p~liil~G~pGsGKST~a~~l~~~ 37 (172)
T d1yj5a2 13 NPEVVVAVGFPGAGKSTFIQEHLVS 37 (172)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHTGG
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 9989999899999899999999976
No 78
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=89.64 E-value=0.11 Score=26.52 Aligned_cols=23 Identities=17% Similarity=0.472 Sum_probs=19.9
Q ss_pred CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 64259987899949999999999
Q 003637 479 DINILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~ 501 (806)
.+.|+++|+||+|||+|++.+..
T Consensus 2 ~~ki~ivG~~~~GKTsLi~~l~~ 24 (165)
T d1ksha_ 2 ELRLLMLGLDNAGKTTILKKFNG 24 (165)
T ss_dssp CEEEEEECSTTSSHHHHHHHHTT
T ss_pred CEEEEEECCCCCCHHHHHHHHCC
T ss_conf 27999999999899999999808
No 79
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=89.49 E-value=0.11 Score=26.51 Aligned_cols=24 Identities=17% Similarity=0.214 Sum_probs=21.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-|++.|+||+|||++++.+++.+.
T Consensus 3 iI~i~G~~GsGKsT~~~~L~~~l~ 26 (190)
T d1khta_ 3 VVVVTGVPGVGSTTSSQLAMDNLR 26 (190)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 899989999898999999999998
No 80
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=89.37 E-value=0.11 Score=26.58 Aligned_cols=26 Identities=27% Similarity=0.226 Sum_probs=22.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 42599878999499999999997899
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
+.|.+-||||+|||++++.+++.+.-
T Consensus 4 i~IaIdGp~GsGKgT~ak~La~~lg~ 29 (223)
T d1q3ta_ 4 IQIAIDGPASSGKSTVAKIIAKDFGF 29 (223)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 59997899987989999999999699
No 81
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.26 E-value=0.15 Score=25.61 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=20.5
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 642599878999499999999997
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
++-|+++|++|+|||+|++.+..-
T Consensus 2 eiKi~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 2 EVKLAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 679999998997899999999739
No 82
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=88.77 E-value=0.13 Score=25.93 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=21.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
.+.++|.||+|||+|++.+.+.+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~ 27 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALC 27 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 899991899989999999999999
No 83
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=88.70 E-value=0.53 Score=21.63 Aligned_cols=81 Identities=26% Similarity=0.305 Sum_probs=45.1
Q ss_pred CCCCCHHHHHHHHHHHCC------HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 457999999999998159------12999999821563355046688775310179533489997545664259987899
Q 003637 416 EIQFDESKIQQLKELSRQ------PNIYETLTRSLAPNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINILLVGDPG 489 (806)
Q Consensus 416 ~~~~~~~~~~~i~~~~~~------~~~~~~l~~sl~P~I~G~e~vK~~ill~L~gg~~~~~~~g~~~r~~i~VLL~GdPG 489 (806)
...+++++++.++.+... .++|--|++-|.=.+-....... ..-..+|... .+...=|.+.|++|
T Consensus 20 ~~~l~~~~~~~~~~~~~~~~~~~v~~iylpl~~l~~~~~~~~~~~~~-~~~~fl~~~~--------~k~P~iIGIaG~sg 90 (308)
T d1sq5a_ 20 PMTLSEDEIARLKGINEDLSLEEVAEIYLPLSRLLNFYISSNLRRQA-VLEQFLGTNG--------QRIPYIISIAGSVA 90 (308)
T ss_dssp -C-CCHHHHHHHHHHCTTCCHHHHHHTHHHHHHHHHHHHHHHHHHHH-HHHHHHTCC---------CCCCEEEEEEECTT
T ss_pred CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCC--------CCCCEEEEEECCCC
T ss_conf 98899999998727787666999999999999999999999999999-9999853447--------89988999968999
Q ss_pred CHHHHHHHHHHHHCCC
Q ss_conf 9499999999997899
Q 003637 490 TSKSQLLQYIHKLSPR 505 (806)
Q Consensus 490 tGKS~llr~ia~~~pr 505 (806)
+|||++++.+..++.+
T Consensus 91 SGKSTla~~L~~lL~~ 106 (308)
T d1sq5a_ 91 VGKSTTARVLQALLSR 106 (308)
T ss_dssp SSHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHH
T ss_conf 9876899999999730
No 84
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.59 E-value=0.16 Score=25.23 Aligned_cols=22 Identities=32% Similarity=0.516 Sum_probs=19.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-|+++|+||+|||+|+..+..-
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999993999999999629
No 85
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.56 E-value=0.15 Score=25.48 Aligned_cols=26 Identities=27% Similarity=0.393 Sum_probs=23.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
+|.|+||+|+||+++++.+.+..+..
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~ 27 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSI 27 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 19999999999999999999748876
No 86
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.51 E-value=0.25 Score=23.94 Aligned_cols=26 Identities=23% Similarity=0.232 Sum_probs=21.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
+|+++|+||+|||+|+..+..--...
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~~~~~~~ 27 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLLTGQYRD 27 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCC
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 89999999989899999998099876
No 87
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.50 E-value=0.54 Score=21.55 Aligned_cols=22 Identities=23% Similarity=0.434 Sum_probs=19.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-|+|+|+||+|||+|+..+..-
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999999999999589
No 88
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=88.35 E-value=0.17 Score=25.16 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+.|+++|+||+|||+|+..+..-
T Consensus 3 iKv~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 3 IKMVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 99999998995989999999829
No 89
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=87.73 E-value=0.25 Score=23.91 Aligned_cols=25 Identities=20% Similarity=0.420 Sum_probs=22.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-+.|+||+|+||+++++.+.+..|.
T Consensus 4 iivl~GpsG~GK~tl~~~L~~~~~~ 28 (182)
T d1znwa1 4 VVVLSGPSAVGKSTVVRCLRERIPN 28 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 9999899999999999999845899
No 90
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.64 E-value=0.2 Score=24.62 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=20.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.-|+++|++|+|||+|+..+..--
T Consensus 4 ~Ki~lvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1kaoa_ 4 YKVVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 599999989939999999997199
No 91
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=87.56 E-value=0.27 Score=23.72 Aligned_cols=24 Identities=21% Similarity=0.367 Sum_probs=20.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-|++.|++|.|||+|++.+.+...
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~ 25 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLE 25 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 899991899839999999999884
No 92
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.54 E-value=0.18 Score=24.95 Aligned_cols=23 Identities=26% Similarity=0.349 Sum_probs=19.8
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.-|+++|+||+|||+|++.+..-
T Consensus 6 ~Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 6 YRLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 28999999997999999999739
No 93
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.53 E-value=0.17 Score=25.15 Aligned_cols=25 Identities=28% Similarity=0.170 Sum_probs=20.7
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 6425998789994999999999978
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
+.-+++.|+||+|||+++..++..+
T Consensus 34 G~~~li~G~pGsGKT~l~lq~~~~~ 58 (251)
T d1szpa2 34 GSITELFGEFRTGKSQLCHTLAVTC 58 (251)
T ss_dssp SSEEEEEESTTSSHHHHHHHHTTTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9699998389998899999999986
No 94
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.45 E-value=0.35 Score=22.91 Aligned_cols=28 Identities=18% Similarity=0.063 Sum_probs=22.5
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 5664259987899949999999999789
Q 003637 477 RGDINILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 477 r~~i~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
+.+.-+++.|+||+|||+++..++...-
T Consensus 35 p~G~~~~i~G~~GsGKT~lalq~~~~~~ 62 (258)
T d1v5wa_ 35 ESMAITEAFGEFRTGKTQLSHTLCVTAQ 62 (258)
T ss_dssp CSSEEEEEECCTTCTHHHHHHHHHHHTT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 6897999988998878899999999997
No 95
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=87.42 E-value=0.23 Score=24.16 Aligned_cols=24 Identities=29% Similarity=0.331 Sum_probs=21.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.-+++.|+||+|||+++..++..+
T Consensus 27 sl~li~G~pGsGKT~l~~qia~~~ 50 (242)
T d1tf7a2 27 SIILATGATGTGKTLLVSRFVENA 50 (242)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHH
T ss_conf 499999189999999999999999
No 96
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.30 E-value=0.47 Score=22.01 Aligned_cols=26 Identities=15% Similarity=0.092 Sum_probs=21.7
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 42599878999499999999997899
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
.-+++.|+||+|||+++..++.....
T Consensus 24 ~v~~i~G~~GsGKT~l~l~la~~~~~ 49 (242)
T d1n0wa_ 24 SITEMFGEFRTGKTQICHTLAVTCQL 49 (242)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHTTS
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 79999958999999999999999988
No 97
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.26 E-value=0.22 Score=24.33 Aligned_cols=23 Identities=30% Similarity=0.509 Sum_probs=19.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|+++|+||+|||+|++.+..--
T Consensus 6 KivlvG~~~vGKTsli~~~~~~~ 28 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEKK 28 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999949899999997299
No 98
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.14 E-value=0.23 Score=24.26 Aligned_cols=24 Identities=21% Similarity=0.277 Sum_probs=20.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
..|+++|++|+|||+|++.+..--
T Consensus 4 ~KivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 4 YKLVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 599999989989999999997098
No 99
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=86.93 E-value=0.21 Score=24.42 Aligned_cols=23 Identities=17% Similarity=0.270 Sum_probs=20.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
..|+++|+||+|||+|+..+...
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 79999999998989999999668
No 100
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.68 E-value=0.23 Score=24.25 Aligned_cols=23 Identities=26% Similarity=0.469 Sum_probs=19.9
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+-|+++|++|+|||+|++.+..-
T Consensus 5 ~Ki~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 5 LKVCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 38999998994999999999739
No 101
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.67 E-value=0.21 Score=24.40 Aligned_cols=23 Identities=26% Similarity=0.335 Sum_probs=19.7
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+-|+++|++|+|||+|++.+..-
T Consensus 7 ~Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 7 HKLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 79999997996989999999739
No 102
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.60 E-value=0.25 Score=23.92 Aligned_cols=24 Identities=25% Similarity=0.401 Sum_probs=20.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.-|+++|++|+|||+|+..+..--
T Consensus 7 ~Ki~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 7 FKLVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 899999999949899999998598
No 103
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.57 E-value=0.25 Score=23.98 Aligned_cols=24 Identities=33% Similarity=0.599 Sum_probs=20.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
+.|+++|++|+|||+|++.+..--
T Consensus 8 iKi~vvG~~~vGKTsli~~l~~~~ 31 (177)
T d1x3sa1 8 LKILIIGESGVGKSSLLLRFTDDT 31 (177)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 289999989908899999997199
No 104
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=86.39 E-value=0.24 Score=24.04 Aligned_cols=25 Identities=20% Similarity=0.301 Sum_probs=20.8
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 6425998789994999999999978
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.+.|+|+|++|+|||+|+..+..--
T Consensus 2 e~ki~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 2 EMELTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 3799999999989899999997197
No 105
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.35 E-value=0.4 Score=22.49 Aligned_cols=24 Identities=33% Similarity=0.634 Sum_probs=20.2
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
..|+++|+||+|||+|++.+..-.
T Consensus 5 ~Ki~vvG~~~vGKTsLi~~~~~~~ 28 (175)
T d2f9la1 5 FKVVLIGDSGVGKSNLLSRFTRNE 28 (175)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 899999999909899999998299
No 106
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.29 E-value=0.23 Score=24.14 Aligned_cols=23 Identities=26% Similarity=0.364 Sum_probs=19.7
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.-|+++|++|+|||+|+..+..-
T Consensus 4 ~Ki~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 4 YKLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 69999997998999999999809
No 107
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.23 E-value=0.26 Score=23.81 Aligned_cols=23 Identities=22% Similarity=0.551 Sum_probs=19.5
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+.|+++|+||+|||+|+..+..-
T Consensus 3 ~Ki~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 3 LKVIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHCC
T ss_conf 89999999996989999999709
No 108
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=86.20 E-value=0.27 Score=23.72 Aligned_cols=22 Identities=23% Similarity=0.557 Sum_probs=19.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-|+++|+||+|||+|+..+..-
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999991989999999719
No 109
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=86.09 E-value=0.48 Score=21.94 Aligned_cols=26 Identities=19% Similarity=0.234 Sum_probs=21.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 42599878999499999999997899
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
.-+++.|+||+|||+++-.++...-+
T Consensus 37 ~~~li~G~pGsGKT~~~lq~~~~~~~ 62 (254)
T d1pzna2 37 AITEVFGEFGSGKTQLAHTLAVMVQL 62 (254)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTTS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 79999858989889999999998634
No 110
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=86.07 E-value=0.21 Score=24.54 Aligned_cols=24 Identities=25% Similarity=0.440 Sum_probs=21.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 599878999499999999997899
Q 003637 482 ILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 482 VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
+++.|.||+|||++++.+++.++.
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~ 27 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDN 27 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 999898998989999999999987
No 111
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=86.06 E-value=0.28 Score=23.61 Aligned_cols=23 Identities=26% Similarity=0.413 Sum_probs=19.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|+++|++|+|||+|+..+..-.
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~~ 29 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADDS 29 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999919899999997398
No 112
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.99 E-value=0.25 Score=23.98 Aligned_cols=24 Identities=21% Similarity=0.405 Sum_probs=19.9
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 642599878999499999999997
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.+-|+++|++|+|||+|+..+..-
T Consensus 3 ~iKi~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 3 SIKLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 799999999991989999999729
No 113
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=85.92 E-value=0.25 Score=23.98 Aligned_cols=24 Identities=25% Similarity=0.281 Sum_probs=21.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.-|+|.|-||+|||++++.+++.+
T Consensus 25 ~vIwltGlsGsGKTTia~~L~~~l 48 (208)
T d1m7ga_ 25 LTIWLTGLSASGKSTLAVELEHQL 48 (208)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 699998999999899999999887
No 114
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.81 E-value=0.27 Score=23.71 Aligned_cols=22 Identities=32% Similarity=0.570 Sum_probs=19.0
Q ss_pred CCEEEECCCCCHHHHHHHHHHH
Q ss_conf 4259987899949999999999
Q 003637 480 INILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~ 501 (806)
+-|+++|+||+|||+|++.+..
T Consensus 6 ~Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 6 IKLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEEECCCCCCHHHHHHHHHC
T ss_conf 8999999999198999999961
No 115
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.61 E-value=0.26 Score=23.76 Aligned_cols=23 Identities=26% Similarity=0.483 Sum_probs=19.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|+++|++|+|||+|++.+..--
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~~ 29 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQGL 29 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999919899999997299
No 116
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=85.58 E-value=0.3 Score=23.34 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=18.7
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
-|+++|++|+|||+|++.+..
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999899588999999972
No 117
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.56 E-value=0.3 Score=23.36 Aligned_cols=23 Identities=22% Similarity=0.309 Sum_probs=19.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.|+++|++|+|||+|+..+..--
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~~ 26 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAGR 26 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999929899999997399
No 118
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.53 E-value=0.27 Score=23.68 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=18.9
Q ss_pred CCEEEECCCCCHHHHHHHHHHH
Q ss_conf 4259987899949999999999
Q 003637 480 INILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~ 501 (806)
+-|+++|++|+|||+|+..+..
T Consensus 3 ~Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 3 YRVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHH
T ss_conf 1899999899798999999970
No 119
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.51 E-value=0.3 Score=23.37 Aligned_cols=24 Identities=29% Similarity=0.329 Sum_probs=20.1
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 642599878999499999999997
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.+-|+++|++|+|||+|++.+..-
T Consensus 5 ~iKivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 5 AIKCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 699999999997999999999749
No 120
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=85.49 E-value=0.31 Score=23.29 Aligned_cols=23 Identities=26% Similarity=0.469 Sum_probs=20.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.|+|+|+||+|||+|+.++...-
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~~ 27 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTDS 27 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999988999999996799
No 121
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=85.39 E-value=0.37 Score=22.77 Aligned_cols=20 Identities=35% Similarity=0.406 Sum_probs=17.8
Q ss_pred CEEEECCCCCHHHHHHHHHH
Q ss_conf 25998789994999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIH 500 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia 500 (806)
-..|+|.+|+|||+|+.++.
T Consensus 97 t~~~~G~SGVGKSTLiN~L~ 116 (225)
T d1u0la2 97 ISTMAGLSGVGKSSLLNAIN 116 (225)
T ss_dssp EEEEECSTTSSHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHC
T ss_conf 08997889877888877305
No 122
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.95 E-value=0.31 Score=23.28 Aligned_cols=22 Identities=27% Similarity=0.569 Sum_probs=19.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-|+++|++|+|||+|++.+...
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999998992999999999728
No 123
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=84.87 E-value=0.39 Score=22.53 Aligned_cols=27 Identities=15% Similarity=0.085 Sum_probs=22.4
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 642599878999499999999997899
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
+.-+++.|+||+|||+++..++..+-.
T Consensus 34 G~l~~i~G~~G~GKT~~~l~~a~~~~~ 60 (258)
T d2i1qa2 34 QSVTEFAGVFGSGKTQIMHQSCVNLQN 60 (258)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHHTTC
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 859999917999989999999999985
No 124
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=84.87 E-value=0.38 Score=22.63 Aligned_cols=21 Identities=29% Similarity=0.591 Sum_probs=18.7
Q ss_pred CCEEEECCCCCHHHHHHHHHH
Q ss_conf 425998789994999999999
Q 003637 480 INILLVGDPGTSKSQLLQYIH 500 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia 500 (806)
+.|+++|+||+|||+|++.+.
T Consensus 18 ~KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 18 LRILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp EEEEEEEETTSSHHHHHHHTC
T ss_pred EEEEEECCCCCCHHHHHHHHH
T ss_conf 899999999998899998873
No 125
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=84.87 E-value=0.26 Score=23.77 Aligned_cols=23 Identities=30% Similarity=0.548 Sum_probs=19.5
Q ss_pred CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 64259987899949999999999
Q 003637 479 DINILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~ 501 (806)
.+.|+++|+||+|||+|+..+..
T Consensus 16 ~~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 16 EVRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp CEEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEEECCCCCCHHHHHHHHHC
T ss_conf 77999999999899999999964
No 126
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.63 E-value=0.3 Score=23.34 Aligned_cols=24 Identities=25% Similarity=0.333 Sum_probs=20.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
+-|+++|++|+|||+|++.+..-.
T Consensus 10 ~Ki~lvG~~~vGKTsLi~r~~~~~ 33 (185)
T d2atxa1 10 LKCVVVGDGAVGKTCLLMSYANDA 33 (185)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 999999999989999999996499
No 127
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.62 E-value=0.31 Score=23.23 Aligned_cols=23 Identities=30% Similarity=0.369 Sum_probs=19.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|+++|++|+|||+|+..+..--
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989938899999997199
No 128
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.57 E-value=0.86 Score=20.14 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=19.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|+++|++|+|||+|++.+..--
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~~~ 24 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMYDS 24 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 89999989909899999998499
No 129
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.51 E-value=0.32 Score=23.18 Aligned_cols=23 Identities=22% Similarity=0.147 Sum_probs=19.7
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.-|+++|++|+|||+|++.+..-
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 38999998992989999999719
No 130
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.45 E-value=0.34 Score=23.02 Aligned_cols=23 Identities=35% Similarity=0.637 Sum_probs=19.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|+++|++|+|||+|++.+....
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~~~ 25 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGGVE 25 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHTC-
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99998989939999999981885
No 131
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=84.45 E-value=0.56 Score=21.48 Aligned_cols=25 Identities=28% Similarity=0.388 Sum_probs=22.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-++|+||+|+||++|.+.+.+..|.
T Consensus 4 livi~GPSG~GK~tl~~~L~~~~p~ 28 (205)
T d1s96a_ 4 LYIVSAPSGAGKSSLIQALLKTQPL 28 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHSCT
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 9999999999999999999863986
No 132
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.42 E-value=0.32 Score=23.13 Aligned_cols=22 Identities=36% Similarity=0.572 Sum_probs=19.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-|+++|+||+|||+|+..+..-
T Consensus 7 KI~lvG~~~vGKTsll~~~~~~ 28 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIEK 28 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990999999999709
No 133
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=84.37 E-value=0.31 Score=23.28 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=20.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+.|+++|+||+|||+|+.++...
T Consensus 2 ~kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 2 MKVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 89999899999899999999688
No 134
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=84.36 E-value=0.21 Score=24.52 Aligned_cols=23 Identities=22% Similarity=0.443 Sum_probs=19.7
Q ss_pred CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 64259987899949999999999
Q 003637 479 DINILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~ 501 (806)
.+.|+++|+||+|||+|++.+..
T Consensus 12 ~~kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 12 EMRILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp CEEEEEEEETTSSHHHHHHHTTC
T ss_pred EEEEEEECCCCCCHHHHHHHHHC
T ss_conf 47999999999878999999844
No 135
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=84.32 E-value=0.36 Score=22.78 Aligned_cols=26 Identities=12% Similarity=0.115 Sum_probs=22.2
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 64259987899949999999999789
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
.+-|-+.|++|+|||++++.++..+.
T Consensus 22 ~~iIgI~G~~GSGKSTla~~L~~~l~ 47 (198)
T d1rz3a_ 22 RLVLGIDGLSRSGKTTLANQLSQTLR 47 (198)
T ss_dssp SEEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 88999789887899999999999836
No 136
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=84.19 E-value=0.27 Score=23.75 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=17.8
Q ss_pred CEEEECCCCCHHHHH-HHHHHHHC
Q ss_conf 259987899949999-99999978
Q 003637 481 NILLVGDPGTSKSQL-LQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~l-lr~ia~~~ 503 (806)
|+|+.|.||||||+. +..++.++
T Consensus 16 ~~lI~g~aGTGKTt~l~~rv~~ll 39 (306)
T d1uaaa1 16 PCLVLAGAGSGKTRVITNKIAHLI 39 (306)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 989996288438999999999999
No 137
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.18 E-value=0.33 Score=23.09 Aligned_cols=24 Identities=42% Similarity=0.571 Sum_probs=20.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
+-|+++|+||+|||+|++.+..--
T Consensus 3 ~Ki~vvG~~~vGKTSli~~l~~~~ 26 (166)
T d1g16a_ 3 MKILLIGDSGVGKSCLLVRFVEDK 26 (166)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 999999999967899999998688
No 138
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.06 E-value=0.39 Score=22.59 Aligned_cols=23 Identities=30% Similarity=0.453 Sum_probs=19.6
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
..|+++|++|+|||+|+..+..-
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 79999998995989999999709
No 139
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=83.76 E-value=0.31 Score=23.27 Aligned_cols=23 Identities=30% Similarity=0.484 Sum_probs=20.6
Q ss_pred CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 64259987899949999999999
Q 003637 479 DINILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~ 501 (806)
.++|+|+|.||+|||+++..+..
T Consensus 32 ~l~I~LvG~tg~GKSSliN~ilg 54 (257)
T d1h65a_ 32 SLTILVMGKGGVGKSSTVNSIIG 54 (257)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHC
T ss_conf 74899989999869999999858
No 140
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.72 E-value=0.64 Score=21.04 Aligned_cols=27 Identities=15% Similarity=0.396 Sum_probs=23.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCE
Q ss_conf 259987899949999999999789970
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGI 507 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~ 507 (806)
.|.|+||.|+||++|++.+.+..|...
T Consensus 5 ~ivl~Gpsg~GK~tl~~~L~~~~~~~~ 31 (178)
T d1kgda_ 5 TLVLLGAHGVGRRHIKNTLITKHPDRF 31 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred CEEEECCCCCCHHHHHHHHHHHCCCCE
T ss_conf 199999899999999999997097676
No 141
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.66 E-value=0.42 Score=22.37 Aligned_cols=22 Identities=36% Similarity=0.569 Sum_probs=18.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-|+++|++|+|||+|++.+..-
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999992999999999719
No 142
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=83.24 E-value=0.38 Score=22.66 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=19.6
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
.|+|+|.||+|||+|++++..
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHCC
T ss_conf 999989999879999998529
No 143
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=83.09 E-value=0.94 Score=19.86 Aligned_cols=25 Identities=20% Similarity=0.408 Sum_probs=21.6
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 6425998789994999999999978
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
++||-++|.|+.|||+|+.++.+..
T Consensus 5 ~inIaiiG~~naGKSTL~n~L~~~~ 29 (179)
T d1wb1a4 5 NINLGIFGHIDHGKTTLSKVLTEIA 29 (179)
T ss_dssp EEEEEEEECTTSSHHHHHHHHHTTC
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHC
T ss_conf 8799999077870999999999743
No 144
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.04 E-value=0.99 Score=19.71 Aligned_cols=23 Identities=30% Similarity=0.508 Sum_probs=19.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|+++|+||+|||+|+..+..-.
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~~ 30 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTNK 30 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999979999999998497
No 145
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.99 E-value=0.4 Score=22.46 Aligned_cols=22 Identities=36% Similarity=0.522 Sum_probs=18.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-|+|+|++|+|||.|++.+..-
T Consensus 4 KivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999995989999999729
No 146
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.79 E-value=0.36 Score=22.82 Aligned_cols=21 Identities=33% Similarity=0.600 Sum_probs=18.9
Q ss_pred CCEEEECCCCCHHHHHHHHHH
Q ss_conf 425998789994999999999
Q 003637 480 INILLVGDPGTSKSQLLQYIH 500 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia 500 (806)
+-|+++|++|+|||+|++.+.
T Consensus 3 iKivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 3 VKILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEEEECSTTSSHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHH
T ss_conf 899999899999899999884
No 147
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.47 E-value=0.42 Score=22.31 Aligned_cols=23 Identities=30% Similarity=0.348 Sum_probs=19.2
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+-|+++|++|+|||.|+..+..-
T Consensus 4 iKvvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 4 IKCVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 69999999996999999999719
No 148
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.10 E-value=0.51 Score=21.76 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=21.1
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 6425998789994999999999978
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.+.|+++|++|+|||+|+..+..--
T Consensus 5 ~~ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 5 ELRLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEEEEECCTTTTHHHHHHHHHHSC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 3799999989978999999997197
No 149
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=81.89 E-value=1.1 Score=19.42 Aligned_cols=90 Identities=14% Similarity=0.186 Sum_probs=51.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCEE---------CCC-------CC-CCCCCCEEE--------EECCCCCCCCCCC
Q ss_conf 2599878999499999999997899700---------169-------97-310054144--------5318888731003
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGIY---------TSG-------KG-SSAVGLTAY--------VTKDPETGETVLE 535 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~~---------tsg-------~~-~~~~gLta~--------~~kd~~~ge~~le 535 (806)
||-++|..|.|||+|+.++...+...-- +++ ++ +....+... ....+....+..+
T Consensus 8 ni~i~gh~~~GKTtL~e~ll~~~g~~~~~g~v~~~~~~~D~~~~E~~r~~si~~~~~~~~~~~~~~n~iDtPG~~dF~~e 87 (276)
T d2bv3a2 8 NIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINIIDAPGHVDFTIE 87 (276)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHTSSCC-------------------CCCCCCCSEEEEEETTEEEEEECCCSSSSCSTT
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCCCCCCEECCCEEEECCHHHHHCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHH
T ss_conf 99999589899899999999964853402336518469856588875188600112343159838999527860226999
Q ss_pred C-CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 4-5201257731221211138999999999988624
Q 003637 536 S-GALVLSDRGICCIDEFDKMSESARSMLHEVMEQQ 570 (806)
Q Consensus 536 ~-Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q 570 (806)
. .++..+|..+++||-.+-........+..+-+.+
T Consensus 88 ~~~~l~~~D~avlVvda~~Gv~~~T~~~w~~a~~~~ 123 (276)
T d2bv3a2 88 VERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYK 123 (276)
T ss_dssp HHHHHHHCCEEEEEEETTTSSCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHCC
T ss_conf 999999630057732256774466999999999859
No 150
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=81.57 E-value=0.51 Score=21.74 Aligned_cols=21 Identities=38% Similarity=0.675 Sum_probs=18.8
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
-|.++|+||+|||+|++.+..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899999999989999999967
No 151
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=81.30 E-value=0.44 Score=22.21 Aligned_cols=23 Identities=26% Similarity=0.505 Sum_probs=17.7
Q ss_pred CEEEECCCCCHHHHHH-HHHHHHC
Q ss_conf 2599878999499999-9999978
Q 003637 481 NILLVGDPGTSKSQLL-QYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~ll-r~ia~~~ 503 (806)
++|+.|.||||||+.+ ..+++++
T Consensus 26 ~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 26 PLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp CEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 989995298668999999999999
No 152
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=81.28 E-value=0.45 Score=22.13 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=19.0
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
.|+|+|.||+|||+|+.++..
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899999999889999999968
No 153
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.11 E-value=0.3 Score=23.43 Aligned_cols=21 Identities=33% Similarity=0.621 Sum_probs=18.0
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
-|+++|++|+|||+|++.+..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999999499999999970
No 154
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=81.01 E-value=0.6 Score=21.23 Aligned_cols=22 Identities=23% Similarity=0.238 Sum_probs=17.8
Q ss_pred CCEEEECCCCCHHHHHHHHHHH
Q ss_conf 4259987899949999999999
Q 003637 480 INILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~ 501 (806)
.-+++.|+||+|||+++..++.
T Consensus 27 ~~~~I~G~~G~GKT~la~~~~~ 48 (242)
T d1tf7a1 27 RSTLVSGTSGTGKTLFSIQFLY 48 (242)
T ss_dssp SEEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHH
T ss_conf 3999994799999999999999
No 155
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=79.60 E-value=1.3 Score=18.90 Aligned_cols=90 Identities=18% Similarity=0.203 Sum_probs=51.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC----EECCCCCC-------CCCCCE------EE--------EECCCCCCCCCCC
Q ss_conf 25998789994999999999978997----00169973-------100541------44--------5318888731003
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG----IYTSGKGS-------SAVGLT------AY--------VTKDPETGETVLE 535 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~----~~tsg~~~-------~~~gLt------a~--------~~kd~~~ge~~le 535 (806)
||.++|..|.|||+|+..+...+... ....|... ...+.| .. ....|....+..+
T Consensus 4 Nv~iiGh~~~GKTtL~e~ll~~~g~~~~~g~v~~g~~~~D~~~~E~~r~~ti~~~~~~~~~~~~~~n~iDtPGh~dF~~e 83 (267)
T d2dy1a2 4 TVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLFRGHRVFLLDAPGYGDFVGE 83 (267)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTSSSSCCCGGGTCCSSCCSHHHHHTTSCCSCEEEEEEETTEEEEEEECCCSGGGHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCHHCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCEEEECCCCHHHHHHH
T ss_conf 99999488980999999999970975530662222113562698887387687510222234321068806815543355
Q ss_pred -CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHC
Q ss_conf -45201257731221211138999999999988624
Q 003637 536 -SGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQ 570 (806)
Q Consensus 536 -~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q 570 (806)
..++..+|+.++++|-.+-........+..+.+.+
T Consensus 84 ~~~al~~~D~avlvvda~~Gv~~~t~~~~~~~~~~~ 119 (267)
T d2dy1a2 84 IRGALEAADAALVAVSAEAGVQVGTERAWTVAERLG 119 (267)
T ss_dssp HHHHHHHCSEEEEEEETTTCSCHHHHHHHHHHHHTT
T ss_pred HHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf 654312467338984235774211578877655404
No 156
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.29 E-value=0.34 Score=22.95 Aligned_cols=21 Identities=33% Similarity=0.575 Sum_probs=17.9
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
-|+++|++|+|||+|+..+..
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC-
T ss_pred EEEEECCCCCCHHHHHHHHHH
T ss_conf 999999999088999999984
No 157
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=79.21 E-value=0.61 Score=21.21 Aligned_cols=27 Identities=26% Similarity=0.167 Sum_probs=21.1
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 4566425998789994999999999978
Q 003637 476 FRGDINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 476 ~r~~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.+|. -.+|+|+||+|||+++-.++...
T Consensus 27 ~pg~-~~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 27 VAGT-VGALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp ETTS-EEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCCC-EEEEEECCCCCHHHHHHHHHHHH
T ss_conf 5895-89999289998999999999999
No 158
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=79.10 E-value=1.1 Score=19.38 Aligned_cols=24 Identities=29% Similarity=0.367 Sum_probs=16.7
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.-++|+|++|+|||+.+--+|..+
T Consensus 12 ~vi~lvGptGvGKTTTiAKLAa~~ 35 (213)
T d1vmaa2 12 FVIMVVGVNGTGKTTSCGKLAKMF 35 (213)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 899998999998899999999999
No 159
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=78.96 E-value=0.71 Score=20.73 Aligned_cols=22 Identities=32% Similarity=0.528 Sum_probs=19.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.|.++|.||+|||+|++.+...
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999999999999999688
No 160
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=78.85 E-value=1.4 Score=18.74 Aligned_cols=101 Identities=13% Similarity=0.171 Sum_probs=51.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC-C--CE-EC-CCC------------CCCCCCCEEEEECCC-------------CCC
Q ss_conf 259987899949999999999789-9--70-01-699------------731005414453188-------------887
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP-R--GI-YT-SGK------------GSSAVGLTAYVTKDP-------------ETG 530 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p-r--~~-~t-sg~------------~~~~~gLta~~~kd~-------------~~g 530 (806)
+.||.|++|+|||.++-.++..+- . .+ +. .-. .+...+......... ..|
T Consensus 78 ~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g 157 (233)
T d2eyqa3 78 DRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEG 157 (233)
T ss_dssp EEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTT
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCC
T ss_conf 70898388877289999999999976895699746887679999999998724797797635765312699999999679
Q ss_pred C--CCCCCC-----CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCEEEEEECCEEEEECCCEEEEEECCCCC
Q ss_conf 3--100345-----201257731221211138999999999988624789700343563067317997028999
Q 003637 531 E--TVLESG-----ALVLSDRGICCIDEFDKMSESARSMLHEVMEQQTVSIAKAGIIASLNARTSVLACANPSG 597 (806)
Q Consensus 531 e--~~le~G-----al~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~isi~kag~~~~l~~r~siIaaaNp~~ 597 (806)
. .++-.. .+...+-|.+.|||=++.+-..+..|..-... + -.+++++.|..
T Consensus 158 ~~~iviGths~l~~~~~f~~LgLiIiDEeH~fg~kQ~~~l~~~~~~---------------~-~~l~~SATPip 215 (233)
T d2eyqa3 158 KIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRAN---------------V-DILTLTATPIP 215 (233)
T ss_dssp CCSEEEECTHHHHSCCCCSSEEEEEEESGGGSCHHHHHHHHHHHTT---------------S-EEEEEESSCCC
T ss_pred CCCEEEEEHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCC---------------C-CEEEEECCHHH
T ss_conf 9788974202330677655546302223123325789999961889---------------9-88999655109
No 161
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=78.80 E-value=1.4 Score=18.73 Aligned_cols=94 Identities=17% Similarity=0.183 Sum_probs=49.4
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHCCC----CEECCCCCCC---------------------CCCCEEEEECCCCCC
Q ss_conf 456642599878999499999999997899----7001699731---------------------005414453188887
Q 003637 476 FRGDINILLVGDPGTSKSQLLQYIHKLSPR----GIYTSGKGSS---------------------AVGLTAYVTKDPETG 530 (806)
Q Consensus 476 ~r~~i~VLL~GdPGtGKS~llr~ia~~~pr----~~~tsg~~~~---------------------~~gLta~~~kd~~~g 530 (806)
+|..+ |.++|.|+.|||+|+.++...... +..+.+.... .-+........+...
T Consensus 3 ~r~p~-IaIiGh~d~GKSTL~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iDtPGh~ 81 (227)
T d1g7sa4 3 IRSPI-VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRETLPGLFFIDTPGHE 81 (227)
T ss_dssp ECCCE-EEEECSTTSSHHHHHHHHHHHHHSCC----CCCBTTEEEEEHHHHHHHSCGGGGGCGGGGTCCEEEEECCCTTS
T ss_pred CCCCE-EEEEECCCCCHHHHHHHHHHHCCHHEECCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEE
T ss_conf 89987-99996998549999999982366001457454531531232101223444332100110111342234641100
Q ss_pred CCCC-CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 3100-345201257731221211138999999999988624
Q 003637 531 ETVL-ESGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQ 570 (806)
Q Consensus 531 e~~l-e~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q 570 (806)
.+.. ...++..+|..++++|=.+-+...+...+..+.+.+
T Consensus 82 ~f~~~~~~~~~~~D~~ilVvda~~g~~~~~~~~~~~~~~~~ 122 (227)
T d1g7sa4 82 AFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILRMYR 122 (227)
T ss_dssp CCTTSBCSSSBSCSEEEEEEETTTCCCHHHHHHHHHHHHTT
T ss_pred CCCCCCHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCC
T ss_conf 00011100012464589998612376320257777764379
No 162
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=78.80 E-value=0.74 Score=20.60 Aligned_cols=23 Identities=35% Similarity=0.582 Sum_probs=20.4
Q ss_pred CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 64259987899949999999999
Q 003637 479 DINILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~ 501 (806)
.+.|.++|.+|+|||+|+.++..
T Consensus 8 ~~kV~iiG~~~~GKSTLin~l~~ 30 (186)
T d1mkya2 8 AIKVAIVGRPNVGKSTLFNAILN 30 (186)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHC
T ss_conf 88899999999999999999977
No 163
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=78.38 E-value=0.68 Score=20.84 Aligned_cols=21 Identities=38% Similarity=0.515 Sum_probs=19.4
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
.|.|+|.||+|||+|+.++.+
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 999997999989999999958
No 164
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=78.36 E-value=0.7 Score=20.76 Aligned_cols=23 Identities=26% Similarity=0.455 Sum_probs=19.6
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.-|||+|+.|+|||+|++.+...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 77999989999889999989509
No 165
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=78.35 E-value=0.47 Score=22.02 Aligned_cols=21 Identities=38% Similarity=0.591 Sum_probs=18.9
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
+|.|+|.|++|||+|+..+..
T Consensus 3 ~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899989999989999999968
No 166
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=78.26 E-value=1.1 Score=19.46 Aligned_cols=24 Identities=29% Similarity=0.321 Sum_probs=16.5
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.-++|+|++|+|||+.+--+|..+
T Consensus 13 ~vi~lvGptGvGKTTTiAKLA~~~ 36 (211)
T d1j8yf2 13 YVIMLVGVQGTGKATTAGKLAYFY 36 (211)
T ss_dssp EEEEEECSCCC----HHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 899998999999899999999999
No 167
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=77.99 E-value=0.68 Score=20.84 Aligned_cols=25 Identities=28% Similarity=0.437 Sum_probs=20.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-+.|+||.|.|||++++.++.+.+.
T Consensus 26 ~~~liGpnGaGKSTll~~i~Gl~~p 50 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIAGIVKP 50 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 9999979998099999999739998
No 168
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=77.86 E-value=0.79 Score=20.40 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=16.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-++|+|++|+|||+.+--+|..+
T Consensus 12 vi~lvGp~GvGKTTTiaKLA~~~ 34 (207)
T d1ls1a2 12 LWFLVGLQGSGKTTTAAKLALYY 34 (207)
T ss_dssp EEEEECCTTTTHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89998999998899999999999
No 169
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=77.80 E-value=0.9 Score=19.99 Aligned_cols=23 Identities=26% Similarity=0.468 Sum_probs=20.0
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
..|||.|++|.|||.++-.+.+.
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEEEECCCCCHHHHHHHHHHC
T ss_conf 99999808999989999999985
No 170
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=77.77 E-value=0.85 Score=20.17 Aligned_cols=25 Identities=32% Similarity=0.387 Sum_probs=18.3
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 6642599878999499999999997
Q 003637 478 GDINILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 478 ~~i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.+-|++++|.+|+|||.+++.+...
T Consensus 49 ~~~H~~I~G~tGsGKT~~l~~li~~ 73 (433)
T d1e9ra_ 49 EPRHLLVNGATGTGKSVLLRELAYT 73 (433)
T ss_dssp GGGCEEEEECTTSSHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 5265899907999689999999999
No 171
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=77.67 E-value=0.76 Score=20.51 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=16.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-++|+|++|+|||+.+--+|..+
T Consensus 8 vi~lvGptGvGKTTTiaKLA~~~ 30 (207)
T d1okkd2 8 VVLVVGVNGVGKTTTIAKLGRYY 30 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99998999998899999999999
No 172
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=77.58 E-value=1.2 Score=19.24 Aligned_cols=23 Identities=26% Similarity=0.366 Sum_probs=16.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-++|+|++|+|||+.+--+|..+
T Consensus 11 vi~lvGptGvGKTTTiAKLA~~~ 33 (211)
T d2qy9a2 11 VILMVGVNGVGKTTTIGKLARQF 33 (211)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99998999999899999999999
No 173
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.36 E-value=1.1 Score=19.42 Aligned_cols=26 Identities=23% Similarity=0.206 Sum_probs=22.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC
Q ss_conf 25998789994999999999978997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG 506 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~ 506 (806)
=|-+.|++|+|||++++.+++.+...
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCHH
T ss_conf 99998999787999999999996410
No 174
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=77.30 E-value=0.62 Score=21.12 Aligned_cols=23 Identities=30% Similarity=0.561 Sum_probs=20.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.+.++|+.|+|||+|++.+..+.
T Consensus 43 ~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 43 TVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp EEEEEECTTSSHHHHHHHHTTTT
T ss_pred EEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99999999985999999986216
No 175
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=77.29 E-value=0.25 Score=23.99 Aligned_cols=25 Identities=36% Similarity=0.517 Sum_probs=21.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-+.|+|+.|+|||+|++.++.+.+.
T Consensus 28 i~~liGpsGsGKSTLl~~i~Gl~~p 52 (232)
T d2awna2 28 FVVFVGPSGCGKSTLLRMIAGLETI 52 (232)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCC
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 9999989998299999999658788
No 176
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=76.92 E-value=0.95 Score=19.82 Aligned_cols=25 Identities=12% Similarity=0.119 Sum_probs=21.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 4259987899949999999999789
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
.-+++.|+||+|||+++-.++..+.
T Consensus 55 ~itei~G~~gsGKTtl~l~~~~~~q 79 (263)
T d1u94a1 55 RIVEIYGPESSGKTTLTLQVIAAAQ 79 (263)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 5899805777478999999999987
No 177
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=76.80 E-value=0.66 Score=20.97 Aligned_cols=24 Identities=33% Similarity=0.470 Sum_probs=20.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
.+.++|+.|.|||+|++.+..+.+
T Consensus 31 ~vaIvG~sGsGKSTLl~ll~gl~~ 54 (241)
T d2pmka1 31 VIGIVGRSGSGKSTLTKLIQRFYI 54 (241)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 999999999989999999973578
No 178
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=76.77 E-value=0.26 Score=23.82 Aligned_cols=24 Identities=29% Similarity=0.491 Sum_probs=21.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-+-|+|+.|.|||++++.++.+..
T Consensus 31 ~~~liG~sGaGKSTll~~i~gl~~ 54 (240)
T d1g2912 31 FMILLGPSGCGKTTTLRMIAGLEE 54 (240)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSSC
T ss_pred EEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 999999999809999999964878
No 179
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=76.24 E-value=0.41 Score=22.44 Aligned_cols=23 Identities=22% Similarity=0.401 Sum_probs=19.7
Q ss_pred CCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 64259987899949999999999
Q 003637 479 DINILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~ 501 (806)
...|.|+|.|++|||+|++++..
T Consensus 16 ~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 16 GIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp SEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCEEEEECCCCCCHHHHHHHHHC
T ss_conf 97899988999989999999858
No 180
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=76.22 E-value=0.66 Score=20.96 Aligned_cols=23 Identities=30% Similarity=0.488 Sum_probs=20.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-+-++|+.|+|||+|++.++.+.
T Consensus 33 ~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 33 FVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCCCHHHHHCCCCC
T ss_conf 99998899998216557506887
No 181
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.90 E-value=0.86 Score=20.13 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=22.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-+.++|+.|.|||+|++.+..+.+.
T Consensus 64 ~vaivG~nGsGKSTLl~~i~Gl~~p 88 (281)
T d1r0wa_ 64 MLAITGSTGSGKTSLLMLILGELEA 88 (281)
T ss_dssp EEEEEESTTSSHHHHHHHHHTSSCC
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 9999989998299999999579747
No 182
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.86 E-value=0.93 Score=19.89 Aligned_cols=25 Identities=20% Similarity=0.458 Sum_probs=21.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 4259987899949999999999789
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
+-|+++|+.|+|||.|++.+..--.
T Consensus 3 ~Kiv~lG~~~vGKTsll~r~~~~~~ 27 (200)
T d2bcjq2 3 LKLLLLGTGESGKSTFIKQMRIIHG 27 (200)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTS
T ss_pred EEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 5999999999988999999967999
No 183
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=75.28 E-value=0.73 Score=20.64 Aligned_cols=24 Identities=21% Similarity=0.452 Sum_probs=21.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-+.|+|+.|+|||++++.++.+.+
T Consensus 28 ~~~liGpsGaGKSTll~~l~Gl~~ 51 (229)
T d3d31a2 28 YFVILGPTGAGKTLFLELIAGFHV 51 (229)
T ss_dssp EEEEECCCTHHHHHHHHHHHTSSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 999998999829999999964768
No 184
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=75.13 E-value=0.97 Score=19.76 Aligned_cols=23 Identities=17% Similarity=0.154 Sum_probs=19.7
Q ss_pred EEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 59987899949999999999789
Q 003637 482 ILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 482 VLL~GdPGtGKS~llr~ia~~~p 504 (806)
+-++|.+|+|||+|+..+...+.
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~ 26 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAV 26 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHH
T ss_conf 99980999989999999999998
No 185
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=74.90 E-value=1.1 Score=19.43 Aligned_cols=25 Identities=28% Similarity=0.453 Sum_probs=20.7
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 6425998789994999999999978
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
+..|||.|++|.|||.++-.+.+.-
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~g 39 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKRG 39 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHTT
T ss_pred CEEEEEEECCCCCHHHHHHHHHHCC
T ss_conf 9999998089999999999999849
No 186
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=74.65 E-value=0.32 Score=23.18 Aligned_cols=21 Identities=33% Similarity=0.540 Sum_probs=17.5
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
-.+|+|.+|+|||+|+.++..
T Consensus 99 ~~vl~G~SGVGKSSLiN~L~~ 119 (231)
T d1t9ha2 99 TTVFAGQSGVGKSSLLNAISP 119 (231)
T ss_dssp EEEEEESHHHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHCC
T ss_conf 499987787348789875151
No 187
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=74.57 E-value=0.95 Score=19.83 Aligned_cols=23 Identities=22% Similarity=0.521 Sum_probs=19.7
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+.|+|+|+.|+|||+|++.+...
T Consensus 3 ~KivllG~~~vGKTsl~~r~~~~ 25 (195)
T d1svsa1 3 VKLLLLGAGESGKSTIVKQMKII 25 (195)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHC
T ss_conf 69999999998889999988408
No 188
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.41 E-value=0.9 Score=20.01 Aligned_cols=23 Identities=30% Similarity=0.430 Sum_probs=20.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.+.++|+.|+|||+|++.+..+.
T Consensus 42 ~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 42 VTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999984999999986143
No 189
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=74.39 E-value=1.8 Score=17.92 Aligned_cols=25 Identities=12% Similarity=0.008 Sum_probs=20.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
+.++..++|+|||.++-.++.....
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~~~ 111 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINELST 111 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHSCS
T ss_pred CCEEEECCCCCCEEHHHHHHHHHCC
T ss_conf 9099957899826437767877467
No 190
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=73.94 E-value=0.34 Score=22.99 Aligned_cols=24 Identities=29% Similarity=0.482 Sum_probs=21.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-+-|+|+.|+|||++++.+..+.+
T Consensus 34 ~~~liGpsGaGKSTLl~~i~Gl~~ 57 (239)
T d1v43a3 34 FLVLLGPSGCGKTTTLRMIAGLEE 57 (239)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSC
T ss_pred EEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 999999999829999999975899
No 191
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=73.85 E-value=0.88 Score=20.06 Aligned_cols=25 Identities=24% Similarity=0.293 Sum_probs=21.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-+.|+|+.|+|||+|++.++.+.+.
T Consensus 29 i~~l~G~NGsGKSTLl~~i~gl~~p 53 (200)
T d1sgwa_ 29 VVNFHGPNGIGKTTLLKTISTYLKP 53 (200)
T ss_dssp CEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCC
T ss_conf 9999999997199999999662056
No 192
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=73.66 E-value=1.1 Score=19.40 Aligned_cols=19 Identities=42% Similarity=0.662 Sum_probs=11.7
Q ss_pred EEECCCCCHHHHHHHHHHH
Q ss_conf 9987899949999999999
Q 003637 483 LLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 483 LL~GdPGtGKS~llr~ia~ 501 (806)
+|+|+.|+|||+++.+++.
T Consensus 27 ~IvG~NGsGKStiL~Ai~~ 45 (292)
T g1f2t.1 27 LIIGQNGSGKSSLLDAILV 45 (292)
T ss_dssp EEECCTTSSHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHH
T ss_conf 9998899889999999999
No 193
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=73.66 E-value=0.84 Score=20.20 Aligned_cols=21 Identities=38% Similarity=0.545 Sum_probs=18.5
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
.|-|+|.|++|||+|+..+..
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 699989999879999999968
No 194
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=73.52 E-value=0.28 Score=23.59 Aligned_cols=25 Identities=32% Similarity=0.515 Sum_probs=21.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-+-|+|+.|.|||++++.++.+.+.
T Consensus 30 i~~iiG~sGsGKSTLl~~i~Gl~~p 54 (258)
T d1b0ua_ 30 VISIIGSSGSGKSTFLRCINFLEKP 54 (258)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCC
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 9999989998299999999747667
No 195
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=73.48 E-value=0.28 Score=23.58 Aligned_cols=23 Identities=30% Similarity=0.404 Sum_probs=20.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-+-|+|+.|.|||+|++.++.+.
T Consensus 30 i~glvG~nGaGKSTLl~~l~G~~ 52 (238)
T d1vpla_ 30 IFGLIGPNGAGKTTTLRIISTLI 52 (238)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999999999999996698
No 196
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=72.97 E-value=1.1 Score=19.40 Aligned_cols=28 Identities=36% Similarity=0.716 Sum_probs=20.9
Q ss_pred EEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 998234576678647517865698666862238999
Q 003637 269 IFRCLVCGYYSDPIVVDRGRINEPSTCLKQECLAKN 304 (806)
Q Consensus 269 ~f~C~~C~~~~~~~~~~~~~~~~P~~C~~~~C~~~~ 304 (806)
-=+|.+||+++. .++..|..||. |++..
T Consensus 67 Pp~CrkCGfvFr------~~~kkPSRCP~--CKSE~ 94 (105)
T d2gmga1 67 PAQCRKCGFVFK------AEINIPSRCPK--CKSEW 94 (105)
T ss_dssp CCBBTTTCCBCC------CCSSCCSSCSS--SCCCC
T ss_pred CHHHHHCCCEEC------CCCCCCCCCCC--CCCCC
T ss_conf 841523677605------66899998998--88726
No 197
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=72.90 E-value=1.9 Score=17.68 Aligned_cols=23 Identities=35% Similarity=0.394 Sum_probs=20.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-+++.|++|+|||.|+..+++..
T Consensus 45 r~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 45 RGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 55686799988789999999977
No 198
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=72.80 E-value=0.96 Score=19.79 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=22.1
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 4259987899949999999999789
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
--+.++|+.|.|||+|++.+..+..
T Consensus 29 e~vaivG~sGsGKSTLl~ll~gl~~ 53 (242)
T d1mv5a_ 29 SIIAFAGPSGGGKSTIFSLLERFYQ 53 (242)
T ss_dssp EEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 9999999999979999999999609
No 199
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=72.65 E-value=1.9 Score=17.64 Aligned_cols=24 Identities=29% Similarity=0.502 Sum_probs=20.9
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.-|-+.|+||.|||+|+..+....
T Consensus 55 ~~IgitG~pGaGKSTLi~~l~~~~ 78 (327)
T d2p67a1 55 LRLGVTGTPGAGKSTFLEAFGMLL 78 (327)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 289743899998999999999999
No 200
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=72.61 E-value=1.9 Score=17.63 Aligned_cols=25 Identities=24% Similarity=0.256 Sum_probs=22.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-|+|.|+=|.|||+++|.+++.+.-
T Consensus 35 ii~L~G~LGaGKTtfvr~~~~~lg~ 59 (158)
T d1htwa_ 35 MVYLNGDLGAGKTTLTRGMLQGIGH 59 (158)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 9999668776588999998764223
No 201
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=72.42 E-value=0.82 Score=20.28 Aligned_cols=23 Identities=26% Similarity=0.449 Sum_probs=20.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-+-|+|+.|+|||++++.++.+.
T Consensus 33 ~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 33 IYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp EEEEEESTTSSHHHHHHHHTTSS
T ss_pred EEEEECCCCCCHHHHHHHHCCCC
T ss_conf 99998999898889999875886
No 202
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=72.14 E-value=1.1 Score=19.46 Aligned_cols=24 Identities=25% Similarity=0.378 Sum_probs=20.0
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 642599878999499999999997
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+..|||.|++|.|||.++-.+...
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 999999818999989999999985
No 203
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=71.52 E-value=1.8 Score=17.90 Aligned_cols=22 Identities=18% Similarity=0.249 Sum_probs=18.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-+++.|+||+|||+++..++.-
T Consensus 37 l~vi~G~~G~GKT~~~~~la~~ 58 (277)
T d1cr2a_ 37 VIMVTSGSGMGKSTFVRQQALQ 58 (277)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHH
T ss_conf 8999947999799999999972
No 204
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=71.14 E-value=2.1 Score=17.41 Aligned_cols=87 Identities=16% Similarity=0.124 Sum_probs=45.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCC---EECCCCCCC--CCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
Q ss_conf 25998789994999999999978997---001699731--0054144531888873100345201257731221211138
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRG---IYTSGKGSS--AVGLTAYVTKDPETGETVLESGALVLSDRGICCIDEFDKM 555 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~---~~tsg~~~~--~~gLta~~~kd~~~ge~~le~Gal~lad~GIl~IDEidkl 555 (806)
-||+.|++|.|||+.+..+....++. ++|-..+.- .-+..-..........|.--.-++...|.-+++|.|+-..
T Consensus 160 liLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiRd~ 239 (401)
T d1p9ra_ 160 IILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDL 239 (401)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCCSH
T ss_pred EEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCH
T ss_conf 48987678777447799986662578746999626743456788702655876779999999998413888984576875
Q ss_pred CHHHHHHHHHHHH
Q ss_conf 9999999999886
Q 003637 556 SESARSMLHEVME 568 (806)
Q Consensus 556 ~~~~q~~L~e~mE 568 (806)
.. ...++.-++.
T Consensus 240 ~t-a~~a~~aa~t 251 (401)
T d1p9ra_ 240 ET-AQIAVQASLT 251 (401)
T ss_dssp HH-HHHHHHHHHT
T ss_pred HH-HHHHHHHHHC
T ss_conf 99-9999999724
No 205
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.33 E-value=0.4 Score=22.51 Aligned_cols=23 Identities=30% Similarity=0.585 Sum_probs=20.3
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+.|.|+|.||+|||+|+.++...
T Consensus 1 ikI~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 1 LRMVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEEEECCHHHHTCHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 98999999999999999999589
No 206
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=69.43 E-value=1 Score=19.62 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=22.4
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 42599878999499999999997899
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
--+.++|+.|+|||++++.++.+.+.
T Consensus 32 e~~~iiG~sGsGKSTll~~i~gl~~p 57 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIAGLDVP 57 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTSSCC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 89999989998099999999758688
No 207
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.77 E-value=2.3 Score=17.07 Aligned_cols=23 Identities=22% Similarity=0.616 Sum_probs=20.7
Q ss_pred CCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 42599878999499999999997
Q 003637 480 INILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
++|.++|.||+|||+|+.++...
T Consensus 57 l~Iai~G~~n~GKSSLiNaL~G~ 79 (400)
T d1tq4a_ 57 LNVAVTGETGSGKSSFINTLRGI 79 (400)
T ss_dssp EEEEEEECTTSSHHHHHHHHHTC
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 17999899999789999999588
No 208
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=68.18 E-value=1.7 Score=18.06 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=18.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
=|-+.|.+|.|||++++++.+.
T Consensus 5 IIgitG~~gSGKstva~~l~~~ 26 (191)
T d1uf9a_ 5 IIGITGNIGSGKSTVAALLRSW 26 (191)
T ss_dssp EEEEEECTTSCHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999898877899999999987
No 209
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=67.72 E-value=0.45 Score=22.14 Aligned_cols=24 Identities=29% Similarity=0.400 Sum_probs=21.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-+-|+|+.|.|||++++.+..+.+
T Consensus 34 i~~liGpnGaGKSTl~~~i~Gl~~ 57 (240)
T d1ji0a_ 34 IVTLIGANGAGKTTTLSAIAGLVR 57 (240)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 999999999859999999967888
No 210
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=66.42 E-value=2 Score=17.53 Aligned_cols=23 Identities=22% Similarity=0.251 Sum_probs=20.4
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|.+.|..|+|||++++.+++.+
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l 24 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAF 24 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89998998789999999999999
No 211
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=65.65 E-value=0.55 Score=21.52 Aligned_cols=24 Identities=29% Similarity=0.477 Sum_probs=20.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-+-|+|+.|.|||+|++.+..+.+
T Consensus 32 i~~liG~nGaGKSTLl~~i~Gl~~ 55 (254)
T d1g6ha_ 32 VTLIIGPNGSGKSTLINVITGFLK 55 (254)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 999999999849999999977976
No 212
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=65.51 E-value=2.3 Score=17.15 Aligned_cols=23 Identities=35% Similarity=0.372 Sum_probs=18.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-.+|+|+-|+|||.++++++-.+
T Consensus 25 ~~vi~G~NgsGKTtileAI~~~l 47 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILVGL 47 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 19999789999999999999997
No 213
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=65.41 E-value=2.7 Score=16.62 Aligned_cols=23 Identities=26% Similarity=0.423 Sum_probs=20.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|-+.|+||.|||+|+..+....
T Consensus 53 ~igitG~pGaGKSTli~~l~~~~ 75 (323)
T d2qm8a1 53 RVGITGVPGVGKSTTIDALGSLL 75 (323)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 98611799888999999999987
No 214
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=65.35 E-value=1.9 Score=17.77 Aligned_cols=23 Identities=17% Similarity=0.216 Sum_probs=20.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|.+.|.+|+|||++++.+++.+
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89998998887999999999999
No 215
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=65.10 E-value=1.7 Score=18.11 Aligned_cols=23 Identities=26% Similarity=0.268 Sum_probs=19.1
Q ss_pred EEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 59987899949999999999789
Q 003637 482 ILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 482 VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-+|+|+.|+|||.++.++.-.+.
T Consensus 29 nvi~G~NGsGKS~il~AI~~~L~ 51 (329)
T g1xew.1 29 TAIVGANGSGKSNIGDAILFVLG 51 (329)
T ss_dssp EEEEECTTSSSHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHC
T ss_conf 99999999889999999999977
No 216
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=64.94 E-value=0.91 Score=19.97 Aligned_cols=20 Identities=35% Similarity=0.559 Sum_probs=9.5
Q ss_pred CEEEECCCCCHHHHHHHHHH
Q ss_conf 25998789994999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIH 500 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia 500 (806)
-+.++|+.|.|||+|++.+.
T Consensus 46 ~vaivG~sGsGKSTLl~ll~ 65 (255)
T d2hyda1 46 TVAFVGMSGGGKSTLINLIP 65 (255)
T ss_dssp EEEEECSTTSSHHHHHTTTT
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99998899980999999997
No 217
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.74 E-value=2.8 Score=16.53 Aligned_cols=91 Identities=16% Similarity=0.306 Sum_probs=54.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC---C-----EECC-C-----CCC----CCCCCEE---------------------
Q ss_conf 2599878999499999999997899---7-----0016-9-----973----1005414---------------------
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR---G-----IYTS-G-----KGS----SAVGLTA--------------------- 521 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr---~-----~~ts-g-----~~~----~~~gLta--------------------- 521 (806)
||.++|..+.|||+|+..+...... . -|+. . ++. +...+..
T Consensus 19 NI~iiGhvd~GKTTL~d~Ll~~~g~i~~~~~~~~~~~D~~~~E~eRgiTi~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i 98 (341)
T d1n0ua2 19 NMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLI 98 (341)
T ss_dssp EEEEECCGGGTHHHHHHHHHHHHBCCBC------------------CCCBCCCEEEEEEECCHHHHHHCSSCCCSSEEEE
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCEEECCEEEEEECCCCCCCCCHHCCCCCCCEEE
T ss_conf 89999688886999999999977986635563232244645677568369678789994267655420100235665379
Q ss_pred EEECCCCCCCCCCC-CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCE
Q ss_conf 45318888731003-452012577312212111389999999999886247
Q 003637 522 YVTKDPETGETVLE-SGALVLSDRGICCIDEFDKMSESARSMLHEVMEQQT 571 (806)
Q Consensus 522 ~~~kd~~~ge~~le-~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~q~ 571 (806)
.....|....+.-+ ..++..+|+.++++|=.+-........+..+.+++.
T Consensus 99 nliDtPGh~dF~~ev~~al~~~D~allVVda~eGv~~qT~~~~~~a~~~~~ 149 (341)
T d1n0ua2 99 NLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERI 149 (341)
T ss_dssp EEECCCCCCSSCHHHHHHHHTCSEEEEEEETTTBSCHHHHHHHHHHHHTTC
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 997378738899999988752372499986566820469999999987699
No 218
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=64.19 E-value=2.8 Score=16.46 Aligned_cols=20 Identities=20% Similarity=0.391 Sum_probs=15.6
Q ss_pred CCCCCEEEECCCCCHHHHHH
Q ss_conf 56642599878999499999
Q 003637 477 RGDINILLVGDPGTSKSQLL 496 (806)
Q Consensus 477 r~~i~VLL~GdPGtGKS~ll 496 (806)
+.+.+++|.++||+|||..+
T Consensus 5 ~~~~~~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 5 KKGMTTVLDFHPGAGKTRRF 24 (140)
T ss_dssp STTCEEEECCCTTSSTTTTH
T ss_pred HCCCCEEEECCCCCCHHHHH
T ss_conf 75996799817998855999
No 219
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=64.18 E-value=2.6 Score=16.78 Aligned_cols=22 Identities=27% Similarity=0.379 Sum_probs=18.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
=|-++|.+|+|||++++++.+.
T Consensus 5 iIgitG~igSGKStv~~~l~~~ 26 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFADL 26 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9997898868899999999987
No 220
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.87 E-value=2.9 Score=16.42 Aligned_cols=27 Identities=19% Similarity=0.298 Sum_probs=23.3
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCE
Q ss_conf 259987899949999999999789970
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPRGI 507 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr~~ 507 (806)
=|.+.|.-|+|||++++.+++.++...
T Consensus 4 ~IviEG~~GsGKST~~~~L~~~l~~~~ 30 (241)
T d2ocpa1 4 RLSIEGNIAVGKSTFVKLLTKTYPEWH 30 (241)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHCTTSE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 999989988859999999999873038
No 221
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=63.50 E-value=1.5 Score=18.33 Aligned_cols=26 Identities=23% Similarity=0.448 Sum_probs=22.2
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 42599878999499999999997899
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
.-|.+.|..|+|||++++.+++.++.
T Consensus 10 ~~I~ieG~~GsGKTTl~~~L~~~l~~ 35 (197)
T d2vp4a1 10 FTVLIEGNIGSGKTTYLNHFEKYKND 35 (197)
T ss_dssp EEEEEECSTTSCHHHHHHTTGGGTTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 19998899998889999999987078
No 222
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=63.47 E-value=2.9 Score=16.38 Aligned_cols=24 Identities=25% Similarity=0.214 Sum_probs=19.5
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
+=|-+.|.+|+|||+++..+...+
T Consensus 28 ~iIGi~G~qGSGKSTl~~~l~~~L 51 (286)
T d1odfa_ 28 LFIFFSGPQGSGKSFTSIQIYNHL 51 (286)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 899837998788999999999999
No 223
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=63.39 E-value=1.6 Score=18.23 Aligned_cols=26 Identities=31% Similarity=0.415 Sum_probs=21.4
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 66425998789994999999999978
Q 003637 478 GDINILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 478 ~~i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.+--+-|+|+.|.|||++++.++.+.
T Consensus 24 ~Gei~~iiG~nGaGKSTLl~~l~Gl~ 49 (231)
T d1l7vc_ 24 AGEILHLVGPNGAGKSTLLARMAGMT 49 (231)
T ss_dssp TTCEEECBCCTTSSHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89899999899980999999994887
No 224
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=62.81 E-value=3 Score=16.29 Aligned_cols=91 Identities=14% Similarity=0.126 Sum_probs=45.3
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHCC---CC-E----ECCCCC--CCCCCCEE----E----------EECCCCCCCCCC
Q ss_conf 64259987899949999999999789---97-0----016997--31005414----4----------531888873100
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLSP---RG-I----YTSGKG--SSAVGLTA----Y----------VTKDPETGETVL 534 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~p---r~-~----~tsg~~--~~~~gLta----~----------~~kd~~~ge~~l 534 (806)
.+||.++|-++.|||+|+.++...+. +. . .+.+.. --..|+|. . ....+....+.-
T Consensus 3 ~ini~iiGhvd~GKSTL~~~Ll~~~g~~~~~~~~~~~~~~d~~~eE~~rgiTi~~~~~~~~~~~~~i~iiDtPGh~df~~ 82 (204)
T d2c78a3 3 HVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIK 82 (204)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHHHHSCTTSCCCCHHHHSCSHHHHHHTCCCSCEEEEEECSSCEEEEEECCCSGGGHH
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCCCEEEEEEEEEEEECCEEEEEEECCCCHHHHH
T ss_conf 71999994789849999999999852304774113543113455775587579843799970881899982898265499
Q ss_pred C-CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3-4520125773122121113899999999998862
Q 003637 535 E-SGALVLSDRGICCIDEFDKMSESARSMLHEVMEQ 569 (806)
Q Consensus 535 e-~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE~ 569 (806)
+ ..++..+|..++++|=-+-+...++..+..+.+.
T Consensus 83 ~~~~~~~~aD~avlVvda~~Gv~~qt~~~~~~~~~~ 118 (204)
T d2c78a3 83 NMITGAAQMDGAILVVSAADGPMPQTREHILLARQV 118 (204)
T ss_dssp HHHHHHTTCSSEEEEEETTTCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 999999878999999989999847899999999985
No 225
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.67 E-value=2.9 Score=16.40 Aligned_cols=23 Identities=22% Similarity=0.114 Sum_probs=20.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
=|.|.|..|+|||++++.+++.+
T Consensus 5 lI~ieG~dGsGKsT~~~~L~~~L 27 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQSRKLVEAL 27 (209)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99998998889999999999999
No 226
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=60.01 E-value=2.7 Score=16.60 Aligned_cols=26 Identities=15% Similarity=0.073 Sum_probs=21.9
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 42599878999499999999997899
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
.=..+.|+||+|||+++..++..+.+
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~aqk 83 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQAQK 83 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 47898058765227999999999970
No 227
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=58.61 E-value=3 Score=16.34 Aligned_cols=22 Identities=23% Similarity=0.376 Sum_probs=18.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
=|-+.|.+|+|||++++++.+.
T Consensus 4 iIgITG~igSGKStv~~~l~~~ 25 (205)
T d1jjva_ 4 IVGLTGGIGSGKTTIANLFTDL 25 (205)
T ss_dssp EEEEECSTTSCHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9998888878899999999987
No 228
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.63 E-value=1.9 Score=17.77 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=22.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
=|.+.|+-|+|||++++.+++.+..
T Consensus 4 ~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 4 KISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHC
T ss_conf 8999878887799999999999735
No 229
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=53.89 E-value=4.1 Score=15.36 Aligned_cols=24 Identities=33% Similarity=0.551 Sum_probs=21.1
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 664259987899949999999999
Q 003637 478 GDINILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 478 ~~i~VLL~GdPGtGKS~llr~ia~ 501 (806)
..+.|+++|-|.+|||+++..+..
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~ 134 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAK 134 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHT
T ss_pred CCEEEEEEECCCCCHHHHHHHHHC
T ss_conf 752789986675443555425426
No 230
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.08 E-value=4.3 Score=15.19 Aligned_cols=27 Identities=11% Similarity=0.209 Sum_probs=20.8
Q ss_pred CCCEEECCCCCC-CCHHHHHHHHHHHHH
Q ss_conf 773122121113-899999999998862
Q 003637 543 DRGICCIDEFDK-MSESARSMLHEVMEQ 569 (806)
Q Consensus 543 d~GIl~IDEidk-l~~~~q~~L~e~mE~ 569 (806)
...++++||++. |++..+..+.+.|.+
T Consensus 354 ~~pililDE~d~~Ld~~~~~~~~~~l~~ 381 (427)
T d1w1wa_ 354 PSPFFVLDEVDAALDITNVQRIAAYIRR 381 (427)
T ss_dssp CCSEEEESSTTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 9977999688777899999999999999
No 231
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=52.80 E-value=3 Score=16.30 Aligned_cols=28 Identities=11% Similarity=0.322 Sum_probs=21.3
Q ss_pred CCCEEECCCCCC-CCHHHHHHHHHHHHHC
Q ss_conf 773122121113-8999999999988624
Q 003637 543 DRGICCIDEFDK-MSESARSMLHEVMEQQ 570 (806)
Q Consensus 543 d~GIl~IDEidk-l~~~~q~~L~e~mE~q 570 (806)
...+++|||++. +.+..+..|.+.|++.
T Consensus 241 ~~~~~~iDEpe~~Lhp~~~~~l~~~l~~~ 269 (308)
T d1e69a_ 241 PSPFYVLDEVDSPLDDYNAERFKRLLKEN 269 (308)
T ss_dssp CCSEEEEESCCSSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 67445543203357978999999999985
No 232
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=52.74 E-value=4.3 Score=15.15 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=45.8
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCCC---EE-----CC-CCCCCCCCCEEE--------------EECCCCCCCCCCC
Q ss_conf 6425998789994999999999978997---00-----16-997310054144--------------5318888731003
Q 003637 479 DINILLVGDPGTSKSQLLQYIHKLSPRG---IY-----TS-GKGSSAVGLTAY--------------VTKDPETGETVLE 535 (806)
Q Consensus 479 ~i~VLL~GdPGtGKS~llr~ia~~~pr~---~~-----ts-g~~~~~~gLta~--------------~~kd~~~ge~~le 535 (806)
.+||.++|-+..|||+|+.++...+... .. .. ...--..|+|.. ....+....+.-+
T Consensus 3 ~ini~iiGHvd~GKSTL~~~l~~~~~~~~~~~~~~~~~~~~~~~Er~rgiTi~~~~~~~~~~~~~~~~iDtPGh~~f~~~ 82 (196)
T d1d2ea3 3 HVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPGHADYVKN 82 (196)
T ss_dssp EEEEEEESSTTSSHHHHHHHHHHHHHHTTSBCCCCHHHHHSCCEEEETTEEEECEEEEEECSSCEEEEEECSSHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECEEEEEEECCCCHHHHHHH
T ss_conf 71899995889809999999999998737612556541046565507884177236999812156875237316778999
Q ss_pred -CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHH
Q ss_conf -452012577312212111389999999999886
Q 003637 536 -SGALVLSDRGICCIDEFDKMSESARSMLHEVME 568 (806)
Q Consensus 536 -~Gal~lad~GIl~IDEidkl~~~~q~~L~e~mE 568 (806)
..++..+|..++.+|--+-+.+.++..+..+.+
T Consensus 83 ~~~~~~~aD~allVVda~~G~~~QT~~~~~~a~~ 116 (196)
T d1d2ea3 83 MITGTAPLDGCILVVAANDGPMPQTREHLLLARQ 116 (196)
T ss_dssp HHHTSSCCSEEEEEEETTTCSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9998754376799998688876348999999998
No 233
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.55 E-value=4.5 Score=15.03 Aligned_cols=22 Identities=27% Similarity=0.232 Sum_probs=19.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
-|-++|+.++|||.|+..+...
T Consensus 34 vvsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 34 VVAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp EEEEEEBTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHCCC
T ss_conf 9998899999799999998099
No 234
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=51.31 E-value=4.6 Score=15.00 Aligned_cols=22 Identities=9% Similarity=0.122 Sum_probs=17.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
+.+++-++|.|||.++-.++..
T Consensus 130 ~~il~~pTGsGKT~i~~~i~~~ 151 (282)
T d1rifa_ 130 RRILNLPTSAGRSLIQALLARY 151 (282)
T ss_dssp EEEECCCTTSCHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHH
T ss_conf 7216887115830788999998
No 235
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=51.15 E-value=4.6 Score=14.98 Aligned_cols=27 Identities=26% Similarity=0.348 Sum_probs=22.7
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 456642599878999499999999997
Q 003637 476 FRGDINILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 476 ~r~~i~VLL~GdPGtGKS~llr~ia~~ 502 (806)
.+.+.-|=|+|-|.+|||+|..++...
T Consensus 7 ~~~~~kiGivG~Pn~GKSTlfnalT~~ 33 (296)
T d1ni3a1 7 PGNNLKTGIVGMPNVGKSTFFRAITKS 33 (296)
T ss_dssp SSSCCEEEEEECSSSSHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 788737999789999899999999778
No 236
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=50.34 E-value=4.7 Score=14.90 Aligned_cols=24 Identities=13% Similarity=0.036 Sum_probs=19.8
Q ss_pred CCEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 425998789994999999999978
Q 003637 480 INILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 480 i~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.-+.+.|+||+|||+++..++..+
T Consensus 61 ~i~e~~G~~~~GKT~l~l~~~~~~ 84 (269)
T d1mo6a1 61 RVIEIYGPESSGKTTVALHAVANA 84 (269)
T ss_dssp SEEEEECSSSSSHHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 369996488748899999999987
No 237
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=49.95 E-value=4.8 Score=14.86 Aligned_cols=23 Identities=22% Similarity=0.221 Sum_probs=19.7
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|-|.|..|+|||+++++++...
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~ 25 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNY 25 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHHC
T ss_conf 99997999988999999999868
No 238
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=47.82 E-value=5.1 Score=14.63 Aligned_cols=17 Identities=29% Similarity=0.387 Sum_probs=15.2
Q ss_pred CEEEECCCCCHHHHHHH
Q ss_conf 25998789994999999
Q 003637 481 NILLVGDPGTSKSQLLQ 497 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr 497 (806)
++++.+|+|+|||.++-
T Consensus 42 ~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 42 NLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp CEEEECSSHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHH
T ss_conf 98998689985117899
No 239
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=47.58 E-value=5.2 Score=14.61 Aligned_cols=22 Identities=36% Similarity=0.412 Sum_probs=18.8
Q ss_pred EEEECCCCCHHHHHHHHHHHHC
Q ss_conf 5998789994999999999978
Q 003637 482 ILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 482 VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.++.|-.|.|||++++.+.+..
T Consensus 6 ~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 6 TLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEEECCCCCHHHHHHHHHHCC
T ss_conf 9986488899999999998567
No 240
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=47.51 E-value=5.2 Score=14.60 Aligned_cols=25 Identities=24% Similarity=0.183 Sum_probs=22.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-|-+.|.-|+|||++++.+++.+..
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l~~ 32 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAASG 32 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGGGC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 9999888667899999999998656
No 241
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=44.60 E-value=5.7 Score=14.30 Aligned_cols=77 Identities=14% Similarity=0.219 Sum_probs=41.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC---CCCEECCCCCCCCCCCEEEE----ECCC-CCCC--CCCCC----CCCCCC-CCC
Q ss_conf 25998789994999999999978---99700169973100541445----3188-8873--10034----520125-773
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS---PRGIYTSGKGSSAVGLTAYV----TKDP-ETGE--TVLES----GALVLS-DRG 545 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~---pr~~~tsg~~~~~~gLta~~----~kd~-~~ge--~~le~----Gal~la-d~G 545 (806)
.+++.|+...|||.++|.++-.. .-+.|+........-...+. ..|. ..|. +..+. ..+..+ .+.
T Consensus 43 ~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~E~~~~~~il~~~~~~s 122 (234)
T d1wb9a2 43 MLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYS 122 (234)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHHHHHHHHHHHHCCTTE
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99995467313689999879999998729767417666134420234874675343653189999999999997454660
Q ss_pred EEECCCCCCCCH
Q ss_conf 122121113899
Q 003637 546 ICCIDEFDKMSE 557 (806)
Q Consensus 546 Il~IDEidkl~~ 557 (806)
.++|||+.+-..
T Consensus 123 LvliDE~~~gT~ 134 (234)
T d1wb9a2 123 LVLMDEIGRGTS 134 (234)
T ss_dssp EEEEESCCCCSS
T ss_pred EEEECCCCCCCC
T ss_conf 885322235877
No 242
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=44.26 E-value=1.7 Score=18.07 Aligned_cols=22 Identities=23% Similarity=0.226 Sum_probs=19.3
Q ss_pred EEEECCCCCHHHHHHHHHHHHC
Q ss_conf 5998789994999999999978
Q 003637 482 ILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 482 VLL~GdPGtGKS~llr~ia~~~ 503 (806)
.+|+|+.|+|||.++.++.-.+
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
T ss_conf 8998899998799999999996
No 243
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.10 E-value=6 Score=14.14 Aligned_cols=25 Identities=24% Similarity=0.133 Sum_probs=22.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
=|-+.|.-|+|||++++.+++.+..
T Consensus 5 ~I~iEG~DGsGKST~~~~L~~~L~~ 29 (214)
T d1tmka_ 5 LILIEGLDRTGKTTQCNILYKKLQP 29 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999899888699999999999971
No 244
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=39.81 E-value=6.7 Score=13.81 Aligned_cols=25 Identities=20% Similarity=0.125 Sum_probs=21.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
-|-+.|.-|+|||++++.+++.+..
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999888778899999999998734
No 245
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=38.39 E-value=4.2 Score=15.29 Aligned_cols=25 Identities=20% Similarity=0.321 Sum_probs=22.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
=|-+.|.+|.|||++++.+.+++.+
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~ 30 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRR 30 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999899978099999999999715
No 246
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=35.87 E-value=7.7 Score=13.38 Aligned_cols=23 Identities=35% Similarity=0.352 Sum_probs=19.0
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
+-||.||.|+|||.++-.++..+
T Consensus 106 ~rLL~GdvGSGKT~Va~~a~~~~ 128 (264)
T d1gm5a3 106 NRLLQGDVGSGKTVVAQLAILDN 128 (264)
T ss_dssp CCEEECCSSSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCHHHHHHHHHH
T ss_conf 15666353556659999999998
No 247
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=34.55 E-value=7.4 Score=13.53 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=20.8
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 259987899949999999999789
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSP 504 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~p 504 (806)
-|-+.|+-|+|||++++.+++.+.
T Consensus 6 rI~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEEECSCTTSSHHHHHHHHTC---
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 999989867789999999999817
No 248
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=34.52 E-value=8.1 Score=13.24 Aligned_cols=23 Identities=26% Similarity=0.403 Sum_probs=19.5
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-|-|+|-|.+|||+|..++...-
T Consensus 2 ~v~lvG~pn~GKStlfn~lt~~~ 24 (319)
T d1wxqa1 2 EIGVVGKPNVGKSTFFSAATLVD 24 (319)
T ss_dssp EEEEEECTTSSHHHHHHHHHC--
T ss_pred CEEEECCCCCCHHHHHHHHHCCC
T ss_conf 17688999998999999997889
No 249
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.08 E-value=8.2 Score=13.19 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=20.1
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 25998789994999999999978
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS 503 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~ 503 (806)
-+++.|++|+|||.|+..++.-.
T Consensus 70 r~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 70 KIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
T ss_conf 77766799989899999999988
No 250
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=31.74 E-value=8.9 Score=12.93 Aligned_cols=20 Identities=10% Similarity=0.125 Sum_probs=15.9
Q ss_pred CEEEECCCCCHHHHHHHHHH
Q ss_conf 25998789994999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIH 500 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia 500 (806)
++++++|+|+|||..+-..+
T Consensus 60 ~~~i~apTGsGKT~~~~~~~ 79 (237)
T d1gkub1 60 SFAATAPTGVGKTSFGLAMS 79 (237)
T ss_dssp CEECCCCBTSCSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHH
T ss_conf 77999268976999999999
No 251
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=31.07 E-value=9.2 Score=12.86 Aligned_cols=19 Identities=26% Similarity=0.443 Sum_probs=15.0
Q ss_pred CCCCCCEEEECCCCCHHHH
Q ss_conf 4566425998789994999
Q 003637 476 FRGDINILLVGDPGTSKSQ 494 (806)
Q Consensus 476 ~r~~i~VLL~GdPGtGKS~ 494 (806)
++.+-++++.+++|+|||.
T Consensus 6 ~~~~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTK 24 (305)
T ss_dssp SSTTCEEEECCCTTSSTTT
T ss_pred HHCCCCEEEEECCCCCHHH
T ss_conf 6469949999799997879
No 252
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=25.60 E-value=11 Score=12.21 Aligned_cols=21 Identities=29% Similarity=0.343 Sum_probs=16.8
Q ss_pred CEEEECCCCCHHHHHHHHHHH
Q ss_conf 259987899949999999999
Q 003637 481 NILLVGDPGTSKSQLLQYIHK 501 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~ 501 (806)
|+|+++|+|+|||.++-.++.
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~ 45 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAE 45 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHH
T ss_conf 969991899728899999999
No 253
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=24.46 E-value=12 Score=12.07 Aligned_cols=22 Identities=32% Similarity=0.227 Sum_probs=17.9
Q ss_pred CEEEECCCCCHHHHHHHHHHHH
Q ss_conf 2599878999499999999997
Q 003637 481 NILLVGDPGTSKSQLLQYIHKL 502 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~ 502 (806)
|+++.-|+|+|||..+......
T Consensus 42 ~vlv~apTGsGKT~~~~~~~~~ 63 (206)
T d1oywa2 42 DCLVVMPTGGGKSLCYQIPALL 63 (206)
T ss_dssp CEEEECSCHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCHHHHHHHH
T ss_conf 8899867889975231202554
No 254
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=20.87 E-value=14 Score=11.59 Aligned_cols=25 Identities=12% Similarity=0.159 Sum_probs=20.6
Q ss_pred CEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 2599878999499999999997899
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLSPR 505 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~pr 505 (806)
=+++.|.-|+|||+++-.++..+-+
T Consensus 10 ~i~~sGKGGVGKTTvaa~lA~~lA~ 34 (296)
T d1ihua1 10 YLFFTGKGGVGKTSISCATAIRLAE 34 (296)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 9999799867499999999999997
No 255
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=20.29 E-value=14 Score=11.50 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=41.2
Q ss_pred CEEEECCCCCHHHHHHHHHHHHC---CCCEECCCCCCCCCCCEEEE----ECCC-CCCC--CCCCC----CCCCCC-CCC
Q ss_conf 25998789994999999999978---99700169973100541445----3188-8873--10034----520125-773
Q 003637 481 NILLVGDPGTSKSQLLQYIHKLS---PRGIYTSGKGSSAVGLTAYV----TKDP-ETGE--TVLES----GALVLS-DRG 545 (806)
Q Consensus 481 ~VLL~GdPGtGKS~llr~ia~~~---pr~~~tsg~~~~~~gLta~~----~kd~-~~ge--~~le~----Gal~la-d~G 545 (806)
-+++.||...|||.++|.++-.. .-+.|+........-..... ..|. ..|. +..|. -.+..+ .+.
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~I~~~~~~~d~~~~~~StF~~el~~~~~il~~~~~~s 116 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVEMEEVALILKEATENS 116 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHHHHHHHHHHHHCCTTE
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 79997887345323455658999998525046137519940116999987776023783078986788987750289772
Q ss_pred EEECCCCCCCCHH
Q ss_conf 1221211138999
Q 003637 546 ICCIDEFDKMSES 558 (806)
Q Consensus 546 Il~IDEidkl~~~ 558 (806)
.++|||+.+=...
T Consensus 117 LvliDE~~~gT~~ 129 (224)
T d1ewqa2 117 LVLLDEVGRGTSS 129 (224)
T ss_dssp EEEEESTTTTSCH
T ss_pred EEEECCCCCCCCH
T ss_conf 7855454568623
Done!