BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003643
(805 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6UVJ0|SAS6_HUMAN Spindle assembly abnormal protein 6 homolog OS=Homo sapiens
GN=SASS6 PE=1 SV=1
Length = 657
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 489 LSESLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEYANVRLECNA 548
LSE L A N LT+ + S + +LK+++ ++EE++ E+ S R E + + +EC+
Sbjct: 254 LSE-LEAANKDLTERKYKGDSTIRELKAKLSGVEEELQRTKQEVLSLRRENSTLDVECHE 312
Query: 549 ADERAKILASEVIGLEEKA-----LRLRSNE---------LKLERQLENSQSEISSYKKK 594
++ L ++V LE++ L LR+ E + LE E +Q ++ +
Sbjct: 313 KEKHVNQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQKVVLEENGEKNQVQLGKLEAT 372
Query: 595 ISSLEKERQDFQSTIEALQEEKKMMQSKLR 624
I SL E I+ LQ + K + KL+
Sbjct: 373 IKSLSAELLKANEIIKKLQGDLKTLMGKLK 402
>sp|Q5ZMV2|SAS6_CHICK Spindle assembly abnormal protein 6 homolog OS=Gallus gallus
GN=SASS6 PE=2 SV=1
Length = 640
Score = 38.5 bits (88), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 480 QRSLEASRALSESLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEY 539
QRS++ + L N LT+ + S V +LK+++ +++E + E+ S R E
Sbjct: 249 QRSIQQLQNRLSELEVINKDLTERRYKGDSTVRELKAKLSGVEDECQRAKQEVVSLRREN 308
Query: 540 ANVRLECNAADERAKILASEVIGLEEKA-----LRLRSNE---------LKLERQLENSQ 585
+ EC+ ++ L + V LE++ L +R+ E + LE E Q
Sbjct: 309 TTLDAECHEKEKFINQLQTRVAVLEQEIKDKDQLVIRTKEVLDATQEQKVILEENTEKKQ 368
Query: 586 SEISSYKKKISSLEKERQDFQSTIEALQEEKKMMQSKLR 624
S I + I SL E I+ LQE+ K + SKL+
Sbjct: 369 SHIEKLETTIKSLSAELLKANEIIKKLQEDLKTLMSKLK 407
>sp|P58660|CAR10_MOUSE Caspase recruitment domain-containing protein 10 OS=Mus musculus
GN=Card10 PE=2 SV=1
Length = 1021
Score = 38.1 bits (87), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 87/175 (49%), Gaps = 10/175 (5%)
Query: 459 NEDFAALEQHIEDLTQEKFALQRSLEASRALSESLAAENSSLTDSYNQQRSVVNQLKSEM 518
N+ A Q +++ Q++ + + + R L + L + DS + ++ ++ E+
Sbjct: 281 NQRLTASLQELQEGLQQEMSRPGAAGSERILLDILEHDWREAQDSRQELCQKLHAVQGEL 340
Query: 519 EKLQEEIKVQLVELESFRNEYANVRLECNAADER-AKILAS--EVIGLEEKALRLRSNEL 575
+ +E L E+E R ++ + +C+ R A +LA E+ ++A++ R
Sbjct: 341 QWAEELRDKYLQEMEDLRLKHRTLLKDCDLYKHRMATVLAQLEEIEKERDQAIQSRDRI- 399
Query: 576 KLERQLENSQSEISS--YKKKISSLEKERQDFQSTIEALQEEKKMMQSKLRKASG 628
QL+ SQS I Y+K++ LE ER + +T+ +L+ K M++++L++ G
Sbjct: 400 ----QLQYSQSLIEKDQYRKQVRGLEAERDELLTTVTSLEGTKAMLEAQLQRTQG 450
>sp|O14248|TEA3_SCHPO Tip elongation aberrant protein 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tea3 PE=1 SV=1
Length = 1125
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 474 QEKFALQRSLEASRALSESLAAENSSLTDSYNQQRSVVNQ-------LKSEMEKLQEEIK 526
Q+ LQ+ L+ + + SE L + N L Y++ RSV + L+ E E LQ +I
Sbjct: 674 QKNTELQQLLKQNESASELLKSRNEKLCVDYDKLRSVFEEDSSKILSLQKENENLQSQIL 733
Query: 527 VQLVELESFRN-----EYANVRLECNAADERAKI-LASEVIGLEEKALRLRSNE-LKLER 579
EL +R+ EY N LE + ++ + + VI AL + + L E
Sbjct: 734 QISEELVDYRSRCEALEYGNYELETKLIEMHDRVEMQTNVIEASASALDVSNTAILSFED 793
Query: 580 QLENSQSEISSYKKKISSLEKERQDFQSTIEALQEEKKMMQSKLRKASGSGK 631
L + E S+ ++K +L+ E ++ + +E LQ ++S L ++ K
Sbjct: 794 SLRRERDEKSTLQQKCLNLQYEYENVRIELENLQSRALELESALEQSVSDAK 845
>sp|Q80UK7|SAS6_MOUSE Spindle assembly abnormal protein 6 homolog OS=Mus musculus
GN=Sass6 PE=2 SV=2
Length = 654
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 480 QRSLEASRALSESLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEY 539
QR++ ++ L A N LT+ + S V +LK+++ ++EE++ E+ S R E
Sbjct: 244 QRNIHQLQSRLSELEAANKELTERKYKGDSTVRELKAKLAGVEEELQRAKQEVLSLRREN 303
Query: 540 ANVRLECNAADERAKILASEVIGLEEKA-----LRLRSNE---------LKLERQLENSQ 585
+ EC+ ++ L ++V LE++ L LR+ E + LE E +Q
Sbjct: 304 CTLDTECHEKEKHINQLQTKVAVLEQEIKDKDQLVLRTKEAFDTIQEQKVALEENGEKNQ 363
Query: 586 SEISSYKKKISSLEKERQDFQSTIEALQEEKKMMQSKLR 624
++ + I SL E I+ LQ + K + KL+
Sbjct: 364 IQLGKLEATIKSLSAELLKANEIIKKLQGDLKTLMGKLK 402
>sp|Q9Y5S2|MRCKB_HUMAN Serine/threonine-protein kinase MRCK beta OS=Homo sapiens
GN=CDC42BPB PE=1 SV=2
Length = 1711
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 432 SDRGDIRRLGSNESSIENQHGFYSTKHNEDFAALEQHIEDLTQEKFALQRSLEASRALSE 491
SDRG ++ + + + +++ +H+ A E+ I L QEK L R L+ S +
Sbjct: 410 SDRGSLKSIMQSNTLTKDEDVQRDLEHSLQMEAYERRIRRLEQEKLELSRKLQESTQTVQ 469
Query: 492 SLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQLVELESFRNEYANV-RLECNAAD 550
SL + +L++S + E++KL EEI E +N+ A+ RLE D
Sbjct: 470 SLHGSSRALSNSNRDK---------EIKKLNEEI-------ERLKNKIADSNRLERQLED 513
Query: 551 ERAKILASE-----VIGLEEKALRLRSNELKLERQLENSQSEISSYKKKISSLEKERQ 603
A E + GLE++ +R + +L +QL + + S K++ ++R+
Sbjct: 514 TVALRQEREDSTQRLRGLEKQHRVVRQEKEELHKQLVEASERLKSQAKELKDAHQQRK 571
>sp|Q3KR99|SPDLY_RAT Protein Spindly OS=Rattus norvegicus GN=Spdl1 PE=2 SV=1
Length = 597
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 470 EDLTQEKFALQRSLEASRALSESLAAENSSLTDSYNQQRSVVNQLKSEMEKLQEEIKVQL 529
E+ QEK+ALQR +E + ESL+ E +L QQ++ + QL+ ++ + +
Sbjct: 52 ENYNQEKYALQREVELKSRMLESLSCECEALR---QQQKAQLEQLEMQLHRSHRQ----- 103
Query: 530 VELESFRNEYANVRLECNAA 549
E+ RN+ N+++E + A
Sbjct: 104 -EVHGLRNKLENLKVELDEA 122
>sp|P31111|ZIP1_YEAST Synaptonemal complex protein ZIP1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ZIP1 PE=1 SV=2
Length = 875
Score = 33.5 bits (75), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 507 QRSVVNQLKSEMEKLQEEIKVQLVELESFRNEYANVRLEC-NAADERAKILASEVIGL-- 563
Q +V L SE + L++ I+ QLVE++ + +LE +E+ + L EV+ L
Sbjct: 594 QNEIVKALVSENDTLKQRIQ-QLVEIKENEQKDHTTKLEAFQKNNEQLQKLNVEVVQLKA 652
Query: 564 -----EEKALRLRSNELKLERQLENSQSEISSYKKKISSLEKERQD-------FQSTIEA 611
EE+ L++ K E +E S S++ + K+++ L+ E+QD Q +E+
Sbjct: 653 HELELEEQNRHLKNCLEKKETGVEESLSDVKTLKQQVIVLKSEKQDITAEKLELQDNLES 712
Query: 612 LQEEKKMMQSKLR 624
L+E K +Q K++
Sbjct: 713 LEEVTKNLQQKVQ 725
>sp|Q5HZI1|MTUS1_MOUSE Microtubule-associated tumor suppressor 1 homolog OS=Mus musculus
GN=Mtus1 PE=1 SV=2
Length = 1210
Score = 33.1 bits (74), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 464 ALEQHIEDLTQEKFALQRSLEASRALSESLAAENSSLTDSY-------NQQRS-----VV 511
AL+QH + L+QE +L+ L A+ + E L + L +Y NQQ +
Sbjct: 886 ALKQH-KTLSQELVSLRGELVAASSACEKLEKARADLQTAYQEFVQKLNQQHQTDRTELE 944
Query: 512 NQLK----SEMEKLQEEIKVQLVELESFRNEYANVRLECNAADERAKILA----SEVIGL 563
N+LK +E EKLQ + + E E ++ + NAA E K+ SE + L
Sbjct: 945 NRLKDLYTAECEKLQ---SIYIEEAEKYKTQLQEQFDNLNAAHETTKLEIEASHSEKVEL 1001
Query: 564 EEKALRLRSNELKLERQLENSQSEISSYKKKISSLEKERQDFQSTIEALQEEKK 617
+K +E+K ++E E +K SLEK+ D +S +AL E K
Sbjct: 1002 LKKTYETSLSEIKKSHEMEKKSLE-DLLNEKQESLEKQINDLKSENDALNERLK 1054
>sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus GN=Cgnl1 PE=1 SV=2
Length = 1298
Score = 33.1 bits (74), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 455 STKHNEDF--AALEQHIEDLTQEKFALQRSLEASRALSESLAAENSSLTDSYNQQRSVVN 512
STK +ED AL IE+L Q K LQ L A + L LT + V+
Sbjct: 713 STKRSEDREKGAL---IEELLQAKQDLQDLLIAKEEQEDLLRKRERELTALKGALKEEVS 769
Query: 513 QLKSEMEKLQEEIKVQLVELESFRN--EYANVRLECNA------------ADERAKILAS 558
EM+KL+E+ EL++FR E A +E A AD R K+L
Sbjct: 770 SHDQEMDKLKEQYDA---ELQAFRESVEEATKNVEVLASRSNSSEQSQAEADLREKVLKE 826
Query: 559 EVIGLEEKALRLRSNELKLERQLENSQSEISSYKKKISSLEKERQDF-QSTIEALQEEK 616
E L+ + L +L+RQ+E+ + + + K+ + E E Q ++ + A +EEK
Sbjct: 827 ENEKLQGRIAELERRAAQLQRQMEDVKGDEAQAKETLRKCESEVQQLEEALVHARKEEK 885
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.121 0.317
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 272,519,608
Number of Sequences: 539616
Number of extensions: 11287059
Number of successful extensions: 55845
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 2473
Number of HSP's that attempted gapping in prelim test: 41827
Number of HSP's gapped (non-prelim): 10658
length of query: 805
length of database: 191,569,459
effective HSP length: 126
effective length of query: 679
effective length of database: 123,577,843
effective search space: 83909355397
effective search space used: 83909355397
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 65 (29.6 bits)