Query 003649
Match_columns 805
No_of_seqs 293 out of 1538
Neff 5.8
Searched_HMMs 29240
Date Tue Mar 26 18:03:00 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003649.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1699-1702//hhsearch_pdb/003649hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e8d_A Glycosyl hydrolase, fam 1.0 1 1 1144.7 46.5 551 28-728 3-585 (595)
2 3thd_A Beta-galactosidase; TIM 1.0 1 1 1128.3 44.5 569 23-729 5-620 (654)
3 1tg7_A Beta-galactosidase; TIM 1.0 1 1 1103.0 45.6 661 26-728 3-947 (971)
4 3d3a_A Beta-galactosidase; pro 1.0 1 1 1097.5 47.4 567 23-729 2-588 (612)
5 3og2_A Beta-galactosidase; TIM 1.0 1 1 961.1 50.9 660 23-727 20-978 (1003)
6 3u7v_A Beta-galactosidase; str 1.0 1 1 313.6 11.5 187 9-210 19-226 (552)
7 1vem_A Beta-amylase; beta-alph 1.0 1 1 214.3 5.5 240 41-304 12-296 (516)
8 3tty_A Beta-GAL, beta-galactos 1.0 1 1 212.8 19.6 284 42-348 7-390 (675)
9 1kwg_A Beta-galactosidase; TIM 1.0 1 1 206.9 18.7 271 45-345 1-391 (645)
10 3pzg_A Mannan endo-1,4-beta-ma 1.0 1 1 173.4 10.4 181 31-218 15-221 (383)
No 1
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=1.00 E-value=1 Score=1144.72 Aligned_cols=551 Identities=29% Similarity=0.542 Sum_probs=457.2
Q ss_pred EEEEECCCEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHH
Q ss_conf 39980671999797969999985199999768999999999779988998210787799894134306200999999999
Q 003649 28 TVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIKTVQ 107 (805)
Q Consensus 28 ~vt~d~~~~~idGk~~~l~sG~iHy~R~~~~~W~~~l~k~Ka~GlNtV~tyv~Wn~hEp~~G~ydF~G~~dl~~fl~la~ 107 (805)
+++++ ++|++||||++++||++||+|+||++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++||++|+
T Consensus 3 ~F~i~-~~f~~dG~p~~i~~G~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~ 81 (595)
T 4e8d_A 3 RFEIR-DDFYLDGKSFKILSGAIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQ 81 (595)
T ss_dssp CEEES-SSEEETTEECCCEEEEECGGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHH
T ss_pred EEEEC-CEEEECCEEEEEEEEEECHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHHHHHHHH
T ss_conf 07967-77999998989989985722299999999999999739977998536787089887541346366999999999
Q ss_pred HCCCEEEECCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 82979997048411210288988807333698154138945699999999999999770533413698549862355657
Q 003649 108 RVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYG 187 (805)
Q Consensus 108 ~~GL~vilR~GPYicaEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEyg 187 (805)
++||+|||||||||||||++||+|.||.++| +++|++|+.|++++++|+++|+++++ ++++++||||||+|||||||
T Consensus 82 ~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~--~~~~~~GgpVI~~QvENEyG 158 (595)
T 4e8d_A 82 DLGLYAIVRPSPFICAEWEFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLV--PRLLDNGGNILMMQVENEYG 158 (595)
T ss_dssp HTTCEEEEECCSCCCTTBGGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTG--GGBGGGTSCEEEEESSSSGG
T ss_pred HCCCEEEEECCCCEECCCCCCCCCHHHCCCC-CEECCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEECCCCCC
T ss_conf 8699899704774301217782775550687-45315897999999999999999998--87410699889997554346
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCC-------CC--CCCCCCCC-CCCC-CCC------CCCCCCC-C
Q ss_conf 8764579013999999999987089985527607889-------99--64323778-8755-777------9899999-9
Q 003649 188 PESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKEDD-------AP--DPVINSCN-GFYC-DAF------SPNKPYK-P 249 (805)
Q Consensus 188 ~~~~~~~~~~~~Y~~~l~~~~~~~g~~vP~~~~~~~~-------~p--~~vi~t~n-g~~~-~~~------~~~~p~~-P 249 (805)
++ + ++++||+||++++++.|++|||+||++.. +. +++++||| |.+| +.| .+++|++ |
T Consensus 159 ~~----~-~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~P 233 (595)
T 4e8d_A 159 SY----G-EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKWP 233 (595)
T ss_dssp GT----C-CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCCC
T ss_pred CC----C-CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 65----7-718999999999997599678998259513104588537888377761798566767788876303899998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC----C---CCCCCCCCCCCCC
Q ss_conf 20121254224554898777897889999999998099112222653278978779999----6---3346768998897
Q 003649 250 TLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGP----F---ITTSYDYDAPLDE 322 (805)
Q Consensus 250 ~~~tE~~~Gwf~~wG~~~~~r~~ed~a~~~~~~~~~g~s~~N~YM~hGGTNfG~~~G~~----~---~~TSYDydApl~E 322 (805)
+||+|||+|||++||+++++|++++++..+++++++| | +||||||||||||+|+|++ + ++|||||||||+|
T Consensus 234 ~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g-s-~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi~E 311 (595)
T 4e8d_A 234 LMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQG-S-INLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALLDE 311 (595)
T ss_dssp CEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHHS-E-EEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSBCT
T ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-C-CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 0898631654455699877789999999999999769-9-5498554532724246877777777787776677980586
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEECCCCC
Q ss_conf 89888624799999999997521134689994357898530123204976212353115777412899678242049973
Q 003649 323 YGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWS 402 (805)
Q Consensus 323 ~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~lp~~s 402 (805)
+|++ +|||.++|+++..+. .+...+. |.. .++..| ..|.+.. .
T Consensus 312 ~G~~-t~Ky~~lr~~i~~~~--~~~p~~~-P~~------~~~~~~-------------------~~v~l~~--------~ 354 (595)
T 4e8d_A 312 EGNP-TAKYLAVKKMMATHF--SEYPQLE-PLY------KESMEL-------------------DAIPLVE--------K 354 (595)
T ss_dssp TSCB-CHHHHHHHHHHHHHC--TTSCCCC-CCC------CCBCCE-------------------EEEEEEE--------E
T ss_pred CCCC-CHHHHHHHHHHHHHC--CCCCCCC-CCC------CCCCCC-------------------CEEEECC--------C
T ss_conf 7783-478999999999747--7999999-987------764356-------------------5087504--------1
Q ss_pred EEECCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEE
Q ss_conf 00048887100014221010000001356655566544---333433467787544442011107888995479999996
Q 003649 403 ISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWET---YDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSV 479 (805)
Q Consensus 403 vsilpdc~~v~~nta~v~~q~~~~~~~~~~~~~~~w~~---~~e~~~~~~~~~~~~~~~~lEql~~t~d~sgYlwY~T~v 479 (805)
++ .|+. +.+++.+. .|.+||+++| .+||++|+|++
T Consensus 355 ~~--------------------------------L~~~l~~l~~~~~s~-------~P~~mE~lgq---~~GyvlY~t~i 392 (595)
T 4e8d_A 355 VS--------------------------------LFETLDSLSSPVESL-------YPQKMEELGQ---SYGYLLYRTET 392 (595)
T ss_dssp EE--------------------------------HHHHHHHHCCCEEES-------SCCBTGGGTC---CSSEEEEEEEE
T ss_pred CC--------------------------------HHHHHHHCCCCCCCC-------CCCCHHHCCC---CCCEEEEEECC
T ss_conf 54--------------------------------899665507764369-------9889889299---76759998226
Q ss_pred ECCCCCCCCCCCCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCC-CEEEEEEECCCCCCCCCCC-
Q ss_conf 05898100158997715646845099999999999999743467403886101246897-7699998337952356788-
Q 003649 480 EISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGI-NKIALLSIAVGLPNVGLHY- 557 (805)
Q Consensus 480 ~~~~~~~~~~~g~~~~L~v~~~~d~~~vfVNg~~vGs~~g~~~~~~~~~~~~i~l~~G~-n~L~iLven~Gr~NyG~~~- 557 (805)
+.... ...|++..++|+|+|||||+++|++++.....++ +++...+. ++|+||||||||+|||+.+
T Consensus 393 ~~~~~--------~~~L~~~~~~Dra~Vfvdg~~~g~l~r~~~~~~i----~~~~~~~~~~~L~ILVEN~GRvNyG~~~~ 460 (595)
T 4e8d_A 393 NWDAE--------EERLRIIDGRDRAQLYVDGQWVKTQYQTEIGEDI----FYQGKKKGLSRLDILIENMGRVNYGHKFL 460 (595)
T ss_dssp ECSSS--------SEEEEEEEEESEEEEEETTEEEEEEEGGGTTSCE----EECCCSSSEEEEEEEEECCCCCCSGGGTT
T ss_pred CCCCC--------CCEEECCCCCEEEEEEECCEEEEEEECCCCCCEE----EEECCCCCCCEEEEEEECCCCCCCCCCCC
T ss_conf 88888--------7346327874489999899799999745676147----85357788778999998589751675568
Q ss_pred -CCCCCCEEECEEECCCCCCCCCCCCCCCE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
Q ss_conf -83444200009993304888457548927-9505851112346999888886567875535667741999999689999
Q 003649 558 -ETWETGVRGAVVLHGLDHGNKDLTWQKWS-YQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGN 635 (805)
Q Consensus 558 -~~~~kGI~G~V~l~g~~~g~~dLs~~~W~-y~vgL~gE~~~l~~~~~~~~~~W~~~~~~~~~~~~~twYkt~F~~p~g~ 635 (805)
+.++|||+|+|+|++. .|+ +|+ |.++|+.- ..+.|..... ...|+||+++|++++..
T Consensus 461 ~~~~~KGi~g~V~l~~~-----~l~--~W~~~~L~l~~~----------~~~~~~~~~~----~~~P~fy~g~f~~~~~~ 519 (595)
T 4e8d_A 461 ADTQRKGIRTGVCKDLH-----FLL--NWKHYPLPLDNP----------EKIDFSKGWT----QGQPAFYAYDFTVEEPK 519 (595)
T ss_dssp CGGGSCEEEEEEEETTE-----ECC--CEEEEEECCCCG----------GGCCTTSCCC----TTSCEEEEEEEEESSCC
T ss_pred CCCCCCCCCCCEEECCE-----ECC--CCEEEEECCCHH----------HHCCCCCCCC----CCCCEEEEEEEECCCCC
T ss_conf 68888787887699999-----857--848976333113----------2223455667----88975899999759988
Q ss_pred CCEEEEECCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEC
Q ss_conf 97189608984299999882201212034469876666678767754467889981001204866555775289999843
Q 003649 636 EPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLKPTKNLLVVFEEL 715 (805)
Q Consensus 636 dpv~Ldl~gmgKG~vwVNG~~iGRYWp~~~~g~~~~c~y~G~~~~~kc~~~cg~PqQtlYhVP~~~Lk~g~N~LVifEe~ 715 (805)
| |||||+|||||+|||||+||||||+ +| |||||| ||++|||+|.|+|||||++
T Consensus 520 D-TfLd~~gwgKG~v~VNG~nLGRYW~------------~G-------------PQ~tLY-vP~~~Lk~G~NeIvvfEl~ 572 (595)
T 4e8d_A 520 D-TYLDLSEFGKGVAFVNGQNLGRFWN------------VG-------------PTLSLY-IPHSYLKEGANRIIIFETE 572 (595)
T ss_dssp B-EEEECTTCCEEEEEETTEEEEEEET------------TC-------------SBCEEE-ECGGGSCSEEEEEEEEESS
T ss_pred C-EEEECCCCCEEEEEECCEEEECCCC------------CC-------------CEEEEE-ECHHHHCCCCCEEEEEEEC
T ss_conf 8-7996788864889988721352467------------79-------------768899-6389957687269999952
Q ss_pred CCCCCCEEEEEEC
Q ss_conf 8997424998322
Q 003649 716 GGDASRISLVKRS 728 (805)
Q Consensus 716 gg~p~~I~~~t~~ 728 (805)
+.....|+|.+..
T Consensus 573 ~~~~~~i~~~~~p 585 (595)
T 4e8d_A 573 GQYKEEIHLTRKP 585 (595)
T ss_dssp SCCCSEEEEESSC
T ss_pred CCCCCEEEEECCC
T ss_conf 7888547863466
No 2
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=1.00 E-value=1 Score=1128.32 Aligned_cols=569 Identities=29% Similarity=0.487 Sum_probs=452.4
Q ss_pred CCCCEEEEEECCCEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHH
Q ss_conf 23312399806719997979699999851999997689999999997799889982107877998941343062009999
Q 003649 23 LIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRF 102 (805)
Q Consensus 23 ~~~~~~vt~d~~~~~idGk~~~l~sG~iHy~R~~~~~W~~~l~k~Ka~GlNtV~tyv~Wn~hEp~~G~ydF~G~~dl~~f 102 (805)
....++|+||+++|++||||++++||++||+|+||++|+++|+|||++|+|+|++||+||.|||+||+|||+|++||++|
T Consensus 5 ~~r~~~v~~d~~~f~ldGkp~~i~sG~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~f 84 (654)
T 3thd_A 5 TQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYF 84 (654)
T ss_dssp -CCCEEEETTTTEEEETTEEECCEEEECCGGGSCGGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHH
T ss_pred CCCCEEEEECCCEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 78717999728979999978789888646454998999999999997199889999633640898984674553779999
Q ss_pred HHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
Q ss_conf 99999829799970484112102889888073336981541389456999999999999997705334136985498623
Q 003649 103 IKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQI 182 (805)
Q Consensus 103 l~la~~~GL~vilR~GPYicaEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QI 182 (805)
|++|+++||+|||||||||||||++||+|.||.++|++.+|++||.|++++++|+++|+++++ ++|+++||||||+||
T Consensus 85 l~~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~--~~~~~~ggpVI~~Qv 162 (654)
T 3thd_A 85 LRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMK--PLLYQNGGPVITVQV 162 (654)
T ss_dssp HHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEEC
T ss_pred HHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEEE
T ss_conf 999998699899556774321038886896785599845742998999999999999999852--431247997899983
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCEEECCCCCCCCCCCCCC---CCCCC-CCCCC-------------C
Q ss_conf 55657876457901399999999998708-9985527607889996432377---88755-77798-------------9
Q 003649 183 ENEYGPESKSLGAAGHAYVNWAAKMAVGL-DTGVPWVMCKEDDAPDPVINSC---NGFYC-DAFSP-------------N 244 (805)
Q Consensus 183 ENEyg~~~~~~~~~~~~Y~~~l~~~~~~~-g~~vP~~~~~~~~~p~~vi~t~---ng~~~-~~~~~-------------~ 244 (805)
|||||+ |+.|+++||+||++++++. |++||+++||+. .+.+.+| +|.+| .+|.+ .
T Consensus 163 ENEyG~----y~~~d~~Ym~~l~~~~~~~~Gi~v~l~t~D~~---~~~~~~~g~~~g~~~t~~f~~~~~~~~~~~~~~~~ 235 (654)
T 3thd_A 163 ENEYGS----YFACDFDYLRFLQKRFRHHLGDDVVLFTTDGA---HKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKC 235 (654)
T ss_dssp SSCGGG----SSCCCHHHHHHHHHHHHHHHCSSSEEEEEEES---SHHHHHHHCBTTBEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCC----CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC---CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHH
T ss_conf 144566----56561999999999998744996556960698---53443478757713102468796378999999974
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCC--C--CCCCCCCCCCC
Q ss_conf 9999920121254224554898777897889999999998099112222653278978779999--6--33467689988
Q 003649 245 KPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGP--F--ITTSYDYDAPL 320 (805)
Q Consensus 245 ~p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~a~~~~~~~~~g~s~~N~YM~hGGTNfG~~~G~~--~--~~TSYDydApl 320 (805)
+|++|+||+|||+|||++||++++.|++++++..+++++++|+| +||||||||||||||+|++ + ++|||||||||
T Consensus 236 ~p~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~g~s-~N~YM~hGGTNfG~~~Ga~~~~~~~~TSYDYdApi 314 (654)
T 3thd_A 236 EPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGAS-VNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPL 314 (654)
T ss_dssp CSSSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHHHHTTCE-EEEECSBCCBCCTTCBCEETTTEECCSBCCTTCSB
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89989599610153577579987788989999999999965984-58986345336232467887788735667678724
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEECCC
Q ss_conf 97898886247999999999975211346899943578985301232049762123531157774128996782420499
Q 003649 321 DEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPP 400 (805)
Q Consensus 321 ~E~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~lp~ 400 (805)
+|+|++ +|||.++|++. +.+.+......|.. .++..|. .|.+. ...+
T Consensus 315 ~E~G~~-t~Ky~~lr~li---~~~~~~~~~~~P~~------~p~~~~~-------------------~v~l~---~~~~- 361 (654)
T 3thd_A 315 SEAGDL-TEKYFALRNII---QKFEKVPEGPIPPS------TPKFAYG-------------------KVTLE---KLKT- 361 (654)
T ss_dssp CTTCCB-CHHHHHHHHHH---TTTSCCCCSCCCCC------CCBCCCE-------------------EEECE---EEEE-
T ss_pred CCCCCC-CHHHHHHHHHH---HHHCCCCCCCCCCC------CCCCCCC-------------------CEEEC---CCCC-
T ss_conf 635673-37899999999---97147998889998------7645667-------------------57522---2234-
Q ss_pred CCEEECCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCC---C--CCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEE
Q ss_conf 73000488871000142210100000013566555665443---3--343346778754444201110788899547999
Q 003649 401 WSISILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETY---D--EDISSLGESSTLTAIGLLEQINITRDTSDYLWY 475 (805)
Q Consensus 401 ~svsilpdc~~v~~nta~v~~q~~~~~~~~~~~~~~~w~~~---~--e~~~~~~~~~~~~~~~~lEql~~t~d~sgYlwY 475 (805)
.|+.+ . +++.+. .|..||+++| .+||++|
T Consensus 362 ------------------------------------L~~~l~~l~~~~~~~s~-------~P~tmE~l~Q---~~GyvlY 395 (654)
T 3thd_A 362 ------------------------------------VGAALDILCPSGPIKSL-------YPLTFIQVKQ---HYGFVLY 395 (654)
T ss_dssp ------------------------------------TTTTHHHHCTTCCEEES-------SCCBTGGGTC---CSSEEEE
T ss_pred ------------------------------------HHHHHHHHCCCCCCCCC-------CCCCHHHHCC---CCCEEEE
T ss_conf ------------------------------------89977762767775369-------9889899288---7576999
Q ss_pred EEEEECCCCCCCCCCCCCCEE--EECCCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 999605898100158997715--646845099999999999999743467403886101246897769999833795235
Q 003649 476 MTSVEISSSESFLRGGQKPTL--TVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNV 553 (805)
Q Consensus 476 ~T~v~~~~~~~~~~~g~~~~L--~v~~~~d~~~vfVNg~~vGs~~g~~~~~~~~~~~~i~l~~G~n~L~iLven~Gr~Ny 553 (805)
+|+++....++ ..| .+..++|+|+|||||+++|++++... . ++++..+.+ ++|+||||||||+||
T Consensus 396 ~t~i~~~~~~~-------~~l~l~~~~v~Dra~Vfvdg~~~G~l~r~~~---~--~l~~~~~~~-~~L~ILVEN~GRvNy 462 (654)
T 3thd_A 396 RTTLPQDCSNP-------APLSSPLNGVHDRAYVAVDGIPQGVLERNNV---I--TLNITGKAG-ATLDLLVENMGRVNY 462 (654)
T ss_dssp EEECSSCEEEE-------EEEECTTCCEESEEEEEETTEEEEEEETTTB---C--EEEEEECTT-CEEEEEEECCCCBCS
T ss_pred EEECCCCCCCC-------CCEEECCCCCCEEEEEEECCEEEEEEECCCC---E--EEECCCCCC-CEEEEEEECCCCCCC
T ss_conf 83257777888-------4034304786327999889979999961565---2--675058889-889999974886546
Q ss_pred CCCCCCCCCCEEECEEECCCCCCCCCCCCCCCE-EECCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 678883444200009993304888457548927-95058511123469-----998888865678755356677419999
Q 003649 554 GLHYETWETGVRGAVVLHGLDHGNKDLTWQKWS-YQVGLKGEAMNLVS-----PSEATSVDWTRGSLAAQGQQSLKWYKA 627 (805)
Q Consensus 554 G~~~~~~~kGI~G~V~l~g~~~g~~dLs~~~W~-y~vgL~gE~~~l~~-----~~~~~~~~W~~~~~~~~~~~~~twYkt 627 (805)
|..+ +++|||+|+|+|++. .|+ +|+ |.+.|+........ ..+.....|.... .. ...|+||++
T Consensus 463 G~~i-~d~KGi~g~V~l~~~-----~l~--~W~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~P~fy~g 531 (654)
T 3thd_A 463 GAYI-NDFKGLVSNLTLSSN-----ILT--DWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNS--SN-YTLPAFYMG 531 (654)
T ss_dssp SGGG-CCCCEECSCCEETTE-----ECC--CEEEEECCHHHHHHTTTTTTCCC----------------C-CCCCEEEEE
T ss_pred CCCC-CCCCCCCCCEEECCE-----ECC--CCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCC--CC-CCCCEEEEE
T ss_conf 8877-878988776578999-----827--848986526125544320122333322233445666--67-888779999
Q ss_pred EEECCCCC----CCEEEEECCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 99689999----97189608984299999882201212034469876666678767754467889981001204866555
Q 003649 628 YFDAPTGN----EPLALDLRSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLK 703 (805)
Q Consensus 628 ~F~~p~g~----dpv~Ldl~gmgKG~vwVNG~~iGRYWp~~~~g~~~~c~y~G~~~~~kc~~~cg~PqQtlYhVP~~~Lk 703 (805)
+|+++.+. .+|||||+|||||+|||||+||||||++ +| |||||| ||++|||
T Consensus 532 ~f~i~~~~~~~p~DTFLd~~gWgKGvV~VNG~NLGRYW~~-----------~G-------------PQ~TLY-vP~p~Lk 586 (654)
T 3thd_A 532 NFSIPSGIPDLPQDTFIQFPGWTKGQVWINGFNLGRYWPA-----------RG-------------PQLTLF-VPQHILM 586 (654)
T ss_dssp EECCCSSCTTCSCBEEEECTTCCSEEEEETTEEEEEECTT-----------TC-------------SCCCEE-ECGGGCC
T ss_pred EEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCC-----------CC-------------CEEEEE-ECHHHHC
T ss_conf 9972677788887779967888707999898025425477-----------79-------------768889-6489958
Q ss_pred CC-CCEEEEEEECCCCC-------CCEEEEEECH
Q ss_conf 77-52899998438997-------4249983221
Q 003649 704 PT-KNLLVVFEELGGDA-------SRISLVKRSV 729 (805)
Q Consensus 704 ~g-~N~LVifEe~gg~p-------~~I~~~t~~~ 729 (805)
+| .|+|||||+++... ..|.|.+..+
T Consensus 587 ~G~~NeIiVfEle~~~~~~~~~~~~~i~~~~~P~ 620 (654)
T 3thd_A 587 TSAPNTITVLELEWAPCSSDDPELCAVTFVDRPV 620 (654)
T ss_dssp SSSCEEEEEEESSCCSCSSSCGGGSEEEEESSCC
T ss_pred CCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCC
T ss_conf 8998469999951687655556652599635565
No 3
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=1.00 E-value=1 Score=1103.04 Aligned_cols=661 Identities=27% Similarity=0.437 Sum_probs=536.5
Q ss_pred CEEEEEECCCEEECCEEEEEEEEEECCCCCC-HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHHHH
Q ss_conf 1239980671999797969999985199999-768999999999779988998210787799894134306200999999
Q 003649 26 CSTVTYDRKAILINGQRRILISGSIHYPRST-PEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRFIK 104 (805)
Q Consensus 26 ~~~vt~d~~~~~idGk~~~l~sG~iHy~R~~-~~~W~~~l~k~Ka~GlNtV~tyv~Wn~hEp~~G~ydF~G~~dl~~fl~ 104 (805)
...|+||+++|+|||||++++||++||+|+| |++|+++|+|||++|+|+|++|||||.|||+||+|||+|++||++||+
T Consensus 3 ~~~v~~d~~~~~idG~p~~l~sG~~hy~r~p~~~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~ 82 (971)
T 1tg7_A 3 QKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFD 82 (971)
T ss_dssp CSSEEECSSCEEETTEEECEEEEECCGGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHH
T ss_pred CCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCEECCCCHHHHHHHHH
T ss_conf 53699848879999949999998888210894678999999999709999999646777089888322456678999999
Q ss_pred HHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
Q ss_conf 99982979997048411210288988807333698154138945699999999999999770533413698549862355
Q 003649 105 TVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIEN 184 (805)
Q Consensus 105 la~~~GL~vilR~GPYicaEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIEN 184 (805)
+|+++||+|||||||||||||++||+|.||.++|+ ++|++||.|++++++|+++|+++++ +++++|||||||+||||
T Consensus 83 ~a~e~Gl~ViLr~GPyi~aE~~~GG~P~WL~~~p~-~lR~~~p~y~~~~~~~~~~l~~~~~--~~~~~~ggpVI~~QveN 159 (971)
T 1tg7_A 83 AAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDG-ILRTSDEAYLKATDNYASNIAATIA--KAQITNGGPIILYQPEN 159 (971)
T ss_dssp HHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSS-CTTSSCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEECCSS
T ss_pred HHHHCCCEEEEECCCCCCCEECCCCCCEEECCCCC-EECCCCHHHHHHHHHHHHHHHHHHH--HHHHCCCCCEEEEECCC
T ss_conf 99985998997058742114447873156035688-7547998999999999999999986--43201799777873266
Q ss_pred CCCCCC-CCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCC----CCCCC---CCCC------CCCCCCC--------CC-
Q ss_conf 657876-457901399999999998708998552760788----99964---3237------7887557--------77-
Q 003649 185 EYGPES-KSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKED----DAPDP---VINS------CNGFYCD--------AF- 241 (805)
Q Consensus 185 Eyg~~~-~~~~~~~~~Y~~~l~~~~~~~g~~vP~~~~~~~----~~p~~---vi~t------~ng~~~~--------~~- 241 (805)
|||++. +.++..+++||+|+++++++.|++||++||++. ..+.. .++. +.+++|. .|
T Consensus 160 Eyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~~~~~~~~~~~~~~g~ldv~~~D~Yp~g~~~~~~~~~~~~~~~ 239 (971)
T 1tg7_A 160 EYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLP 239 (971)
T ss_dssp CCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCSC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 56766666531669999999999999709983399954754455465433573248753777665656775542000001
Q ss_pred -------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-----HHHHHCCCEEEEEEEECCCCCCCCCCCCC
Q ss_conf -------989999992012125422455489877789788999999-----99980991122226532789787799996
Q 003649 242 -------SPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVA-----RFIQKGGSFFNYYMYHGGTNFGRTAGGPF 309 (805)
Q Consensus 242 -------~~~~p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~a~~~~-----~~~~~g~s~~N~YM~hGGTNfG~~~G~~~ 309 (805)
+..+|++|.|++|+|+|||++||+.+++|++++.+..++ .+++.|++.+||||||||||||+++ ++.
T Consensus 240 ~~~~d~~r~~~p~~P~~~~E~~~Gw~~~Wg~~~~~~~~~~~~~~~~~~~~~~~la~Ga~~vnyYm~~GGTNfG~~~-g~~ 318 (971)
T 1tg7_A 240 TYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNLYMIFGGTNWGNLG-HPG 318 (971)
T ss_dssp CCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTTTCSEEEEECSBCCBCCTTCB-CTT
T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC-CCC
T ss_conf 5699986423899997998137857567788765666355768999999999997799789999710435776567-877
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--------------CCCCCC--CCCEEEE------
Q ss_conf 334676899889789888624799999999997521134689994--------------357898--5301232------
Q 003649 310 ITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPT--------------VTSLGT--YQQAHVF------ 367 (805)
Q Consensus 310 ~~TSYDydApl~E~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~~~--------------~~~~~~--~~~~~~y------ 367 (805)
++|||||||||+|+|++++|||.++|+||++++.+++. +..++. ...+.+ ..++..|
T Consensus 319 ~~tSYDy~Apl~E~G~~t~~ky~elr~l~~~l~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~f~~~r~~~ 397 (971)
T 1tg7_A 319 GYTSYDYGSAISESRNITREKYSELKLLGNFAKVSPGY-LVANPGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRHSD 397 (971)
T ss_dssp SCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTCHHH-HTSEECCCBSSSSBSCTTEEEEEEECSSTTSCEEEEEEESS
T ss_pred CCEEECCCCEECCCCCCCHHHHHHHHHHHHHHHHCHHH-HCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCC
T ss_conf 30052347560767883646899999999999867576-51587667654446787438999434789851899996567
Q ss_pred ----------------------------------------------------------E--C-C----------------
Q ss_conf ----------------------------------------------------------0--4-9----------------
Q 003649 368 ----------------------------------------------------------S--A-G---------------- 370 (805)
Q Consensus 368 ----------------------------------------------------------~--~-~---------------- 370 (805)
. . .
T Consensus 398 ~~~~~~~~~~l~v~ts~g~~~iP~~~g~i~l~gr~ski~~~d~~~g~~~l~ysTa~~~t~~~~~~~~v~vly~~~g~~~e 477 (971)
T 1tg7_A 398 YSSQASVEYKLTVPTSAGNLTIPQLGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEHHE 477 (971)
T ss_dssp TTCCCCEEECEEEEETTEEEEECSSSSCEEECTTCCEEEEEEEEETTEEEEEESSEEEEEEEETTEEEEEEEECTTCEEE
T ss_pred CCCCCCEEEEEEEECCCCCEECCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCCCCCEE
T ss_conf 87777448999975589877616778736788973089953432487689986200479888789049999848997337
Q ss_pred -----------CCCE-E---------EEEECCCCCCCEE-EEECCE-----------EEECCC-----------------
Q ss_conf -----------7621-2---------3531157774128-996782-----------420499-----------------
Q 003649 371 -----------QQKC-A---------AFLSNYNTKSAAR-VTFNGR-----------QYNLPP----------------- 400 (805)
Q Consensus 371 -----------~~~~-~---------~fl~n~~~~~~~~-v~~~~~-----------~~~lp~----------------- 400 (805)
.+.| + +|+.|.......+ |+|++. .|-+|+
T Consensus 478 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~lld~~~A~~~w~p~~~~~~~~~~~~~~~~~~ 557 (971)
T 1tg7_A 478 FAVSGASSSSVVEGSSSGISSKKVGKALVVAWDVSTARRIVQVGSLKVFLLDRNSAYNYWVPQVPTKGTAPGYSNQETTA 557 (971)
T ss_dssp EEEETCCCCEEEESCCTTCEEEEETTEEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCCCCSSSSCCCCCSHHHHH
T ss_pred EEEECCCCEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEEECCEEEEEECHHHHHEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 99953762035057665305843685499950468854899979989999645764108655446766667656655678
Q ss_pred -----------CCEEE-------------------C--C-CCCCEEECCCEEEEECCCCC----CCC----CC----CCC
Q ss_conf -----------73000-------------------4--8-88710001422101000000----135----66----555
Q 003649 401 -----------WSISI-------------------L--P-DCKNVVFNTAKVAVQHTKMQ----MLP----TG----SKL 435 (805)
Q Consensus 401 -----------~svsi-------------------l--p-dc~~v~~nta~v~~q~~~~~----~~~----~~----~~~ 435 (805)
||+|| + | +|++|+||+++|.+|++... +.+ .. ...
T Consensus 558 ~~v~v~g~ylvrsasi~~~~l~l~gd~~~~t~~ev~~~p~~~~~v~~Ng~~v~~~~~~~g~~~~~~~~~~~~~~~P~l~~ 637 (971)
T 1tg7_A 558 SSIIVKAGYLVRSAYLDGNDLHIQADFNATTPIEVVGAPSGAKNLVINGKKTQTKVDKNGIWSASVAYTAPKVQLPSLKS 637 (971)
T ss_dssp TCCEEECSSEEEEEEEETTEEEEEEEBSSCEEEEEESCCTTCCEEEETTEEECCEECTTCCEEEEECCCCCCCCCCCGGG
T ss_pred CEEEEECCCEEEEEEEECCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 51898667078999980988999852488822799856888668999998840577468618875477765424656677
Q ss_pred CCCCCCCC---CCCCCCCCCCCCCCCCHHHCCC----C----CCCCCE------EEEEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 66544333---4334677875444420111078----8----899547------99999960589810015899771564
Q 003649 436 LSWETYDE---DISSLGESSTLTAIGLLEQINI----T----RDTSDY------LWYMTSVEISSSESFLRGGQKPTLTV 498 (805)
Q Consensus 436 ~~w~~~~e---~~~~~~~~~~~~~~~~lEql~~----t----~d~sgY------lwY~T~v~~~~~~~~~~~g~~~~L~v 498 (805)
+.|+...| ..+.+ ++...+...+.|+.++ | .+.+|| +|||++|.+..++ ..|.+
T Consensus 638 l~Wk~~~~~pe~~~~~-dDs~W~~~~l~~~~n~~~p~t~p~~~~~sdYGf~~G~lwYR~~F~~~~~~--------~~L~~ 708 (971)
T 1tg7_A 638 LKWKSVDTLPEAKNTY-DDSAWTSADHAYTNNSAHSLQTPTSLFASDYGYHTGALLFRGHFTANGKE--------KTFFV 708 (971)
T ss_dssp SCCEEEESCGGGSTTC-CCTTSEECCCSSCCCTTCCCSSSSCCBGGGGTCCSSCEEEEEEEECCSCC--------CEEEE
T ss_pred CCEEEECCCCCCCCCC-CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC--------EEEEE
T ss_conf 8828957784346888-87776589870213434778877667777668667429999899878860--------38999
Q ss_pred C---CCCEEEEEEECCEEEEEEECCCC--CCEEEEEECCCCCC-CCCEEEEEEECCCCCCC---CCCCCCCCCCEEECEE
Q ss_conf 6---84509999999999999974346--74038861012468-97769999833795235---6788834442000099
Q 003649 499 E---SAGHAVHVFINGQFLGSAFGTRE--NRRFTFSGPANLRA-GINKIALLSIAVGLPNV---GLHYETWETGVRGAVV 569 (805)
Q Consensus 499 ~---~~~d~~~vfVNg~~vGs~~g~~~--~~~~~~~~~i~l~~-G~n~L~iLven~Gr~Ny---G~~~~~~~kGI~G~V~ 569 (805)
+ +++|.++|||||+++|+..+... ..++.|+. ..|+. |.|+|+|||+|+|++|+ |++++++++||. +|+
T Consensus 709 ~~~gG~~~~~~VwvNG~~lGs~~g~~~~~~~~~~~~l-~~L~~gg~NvI~Vlvdn~G~~nsWy~G~~~~~~~~GI~-~v~ 786 (971)
T 1tg7_A 709 QTKGGTAYGHSIWINETYVGSWAGTSINDNNNATYTL-PTLQSGKNYVITVVIDNMGLDEDWTIGSEDMKNPRGII-QYS 786 (971)
T ss_dssp EEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEC-CCCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEE-EEE
T ss_pred EECCCCCCEEEEEECCEEEEEEECCCCCCCCCEEEEE-EEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCE-EEE
T ss_conf 7157654239999999997655467875567668998-67447995189999936777766566733012687624-889
Q ss_pred ECCCCCCC--CCCCCCCC--EE---------ECCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEEEE--CCC
Q ss_conf 93304888--45754892--79---------505851112346999888886567875535-6677419999996--899
Q 003649 570 LHGLDHGN--KDLTWQKW--SY---------QVGLKGEAMNLVSPSEATSVDWTRGSLAAQ-GQQSLKWYKAYFD--APT 633 (805)
Q Consensus 570 l~g~~~g~--~dLs~~~W--~y---------~vgL~gE~~~l~~~~~~~~~~W~~~~~~~~-~~~~~twYkt~F~--~p~ 633 (805)
|.+.+.+. .+|+.+.| +| ++||.||++++|+| +.+...|.+.+..+. ....++|||++|+ +|+
T Consensus 787 L~g~~~~~~~w~l~g~~~ge~~~D~~RgplN~~GL~gE~~~w~~p-~~~~~~W~~~sp~~gl~~~Gv~wyr~~f~L~~p~ 865 (971)
T 1tg7_A 787 LSGQEASAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQP-QPPTQKWDSSSPFTGLTKPGIRFYSTSFDLDLPS 865 (971)
T ss_dssp ETTSCGGGCEEEEESSTTTTSCSCTTTCSSSCCSSHHHHTTTTSS-SCCCTTSBCCCTTTCBSSSEEEEEEEEEECCCCT
T ss_pred EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC
T ss_conf 964579874499850556655554334544544443422253279-9983466487876788888508999997456877
Q ss_pred CCC-CEEEEECCCC------EEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-CCC
Q ss_conf 999-7189608984------29999988220121203446987666667876775446788998100120486655-577
Q 003649 634 GNE-PLALDLRSMG------KGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWL-KPT 705 (805)
Q Consensus 634 g~d-pv~Ldl~gmg------KG~vwVNG~~iGRYWp~~~~g~~~~c~y~G~~~~~kc~~~cg~PqQtlYhVP~~~L-k~g 705 (805)
+.| |+.|+|.+|+ ||++||||++||||||.+ | || |+||||++|| |+|
T Consensus 866 g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~-----------~-------------pq-r~y~VP~giLn~~G 920 (971)
T 1tg7_A 866 GYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNI-----------G-------------PQ-TSFPVPEGILNYHG 920 (971)
T ss_dssp TEECCEEEEECCCCSSCCCEEEEEEETTEEEEEEETTT-----------C-------------SC-CEEEECBTTBCTTS
T ss_pred CCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCC-----------C-------------CC-EEEECCHHHHCCCC
T ss_conf 89830899857888777563289999999874012788-----------7-------------87-79977979938699
Q ss_pred CCEEEE----EEECCCCCCCEEEEEEC
Q ss_conf 528999----98438997424998322
Q 003649 706 KNLLVV----FEELGGDASRISLVKRS 728 (805)
Q Consensus 706 ~N~LVi----fEe~gg~p~~I~~~t~~ 728 (805)
.|+|+| ||+.||+|..|+|+++.
T Consensus 921 ~N~i~vrv~~~~~~Gg~~~~i~l~~~~ 947 (971)
T 1tg7_A 921 TNWLALSLWAQEDNGAKLDSFELINTT 947 (971)
T ss_dssp EEEEEEEEEECSTTCBCCSCEEEEECC
T ss_pred CCEEEEEEECCCCCCCCCCCEEEEECC
T ss_conf 638999986277778986506999750
No 4
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=1.00 E-value=1 Score=1097.54 Aligned_cols=567 Identities=29% Similarity=0.555 Sum_probs=475.3
Q ss_pred CCCCEEEEEECCCEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHH
Q ss_conf 23312399806719997979699999851999997689999999997799889982107877998941343062009999
Q 003649 23 LIQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVRF 102 (805)
Q Consensus 23 ~~~~~~vt~d~~~~~idGk~~~l~sG~iHy~R~~~~~W~~~l~k~Ka~GlNtV~tyv~Wn~hEp~~G~ydF~G~~dl~~f 102 (805)
+.....|++|++.|++||||++++||++||+|+++++|+++|++||++|+|+|++||||+.|||+||+|||++..|+++|
T Consensus 2 ~~~~r~v~~~~~~f~lnGkp~~i~gg~~Hy~r~~~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~f 81 (612)
T 3d3a_A 2 SLSEGTFEVGKNTFLLNGEPFVVKAAEIHYPRIPKEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAF 81 (612)
T ss_dssp CCCCCCEEECSSSEEETTEEECCEEEEECGGGSCGGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHH
T ss_pred CCCCCEEEEECCEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 86666699839999999989999888826766998999999999997399899972707732898983480689899999
Q ss_pred HHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
Q ss_conf 99999829799970484112102889888073336981541389456999999999999997705334136985498623
Q 003649 103 IKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQI 182 (805)
Q Consensus 103 l~la~~~GL~vilR~GPYicaEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QI 182 (805)
|++|+++||+||||+||||||||++||+|.||...+++.+|++||.|++++++|+++|+++++ +++++|+||||||||
T Consensus 82 l~la~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~--~~~~~n~p~II~wqI 159 (612)
T 3d3a_A 82 CRLAQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKKDIKLREQDPYYMERVKLFLNEVGKQLA--DLQISKGGNIIMVQV 159 (612)
T ss_dssp HHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEEC
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHH--HHHHCCCCCEEEEEE
T ss_conf 999997799999956854466011489735422478833437998999999999999999874--110006997778740
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CCCEEECCCC-----CCCCCCCCCCCCCCC-----CCCC---CCCCCC
Q ss_conf 5565787645790139999999999870899-8552760788-----999643237788755-----7779---899999
Q 003649 183 ENEYGPESKSLGAAGHAYVNWAAKMAVGLDT-GVPWVMCKED-----DAPDPVINSCNGFYC-----DAFS---PNKPYK 248 (805)
Q Consensus 183 ENEyg~~~~~~~~~~~~Y~~~l~~~~~~~g~-~vP~~~~~~~-----~~p~~vi~t~ng~~~-----~~~~---~~~p~~ 248 (805)
|||||++ + .+++|++++++++++.|+ +||+++|++. ...+.+++++| +.| +.|. +.+|++
T Consensus 160 eNEyg~y----g-~~~~y~~~l~~~l~~~g~~~vp~~~~~~~~~~~~~~~~~~~~t~n-f~s~~~~~~~~~~~~~~~p~~ 233 (612)
T 3d3a_A 160 ENEYGAF----G-IDKPYISEIRDMVKQAGFTGVPLFQCDWNSNFENNALDDLLWTIN-FGTGANIDEQFKRLKELRPDT 233 (612)
T ss_dssp SSCGGGT----C-CCHHHHHHHHHHHHHHTCCSSCEEEEECTTTGGGTCCTTSEEEEE-EETTCCHHHHHHHHHHHCTTS
T ss_pred CCCCCCC----C-CHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCC
T ss_conf 3445655----7-659999999999987189960330004563222577787666455-677721789999998745589
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC--C-C--CCCCCCCCCCCCCC
Q ss_conf 92012125422455489877789788999999999809911222265327897877999--9-6--33467689988978
Q 003649 249 PTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGG--P-F--ITTSYDYDAPLDEY 323 (805)
Q Consensus 249 P~~~tE~~~Gwf~~wG~~~~~r~~ed~a~~~~~~~~~g~s~~N~YM~hGGTNfG~~~G~--~-~--~~TSYDydApl~E~ 323 (805)
|.|++|||+|||++||++++.|++++++.++++++++|+| +||||||||||||+|+|+ + | ++|||||||||+|+
T Consensus 234 P~~~~E~~~Gwf~~wg~~~~~~~~~~~~~~~~~~l~~g~s-~n~YM~hGGTNfG~~~ga~~~~~~~~~tSYDy~Apl~E~ 312 (612)
T 3d3a_A 234 PLMCSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDRNIS-FSLYMTHGGTSFGHWGGANFPNFSPTCTSYDYDAPINES 312 (612)
T ss_dssp CCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHTTTCE-EEEECSBCCBCCTTCBCEETTTTEEBCSBCCTTCSBCTT
T ss_pred CCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
T ss_conf 9620023467650124777667999999999999986996-686353013477856666887766414531368724757
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEECCEEEECCCCCE
Q ss_conf 98886247999999999975211346899943578985301232049762123531157774128996782420499730
Q 003649 324 GLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTSLGTYQQAHVFSAGQQKCAAFLSNYNTKSAARVTFNGRQYNLPPWSI 403 (805)
Q Consensus 324 G~~~~pKy~~lr~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~fl~n~~~~~~~~v~~~~~~~~lp~~sv 403 (805)
|++ +|||.++|+++.. .+..+.+.. +|..+.+ .+.+|++++
T Consensus 313 g~~-~~ky~~lr~~~~~------~~~~~~~~~--------------------~~p~~~~------------~~~~~~~~~ 353 (612)
T 3d3a_A 313 GKV-TPKYLEVRNLLGN------YLPEGETLP--------------------EIPDSIP------------TIAIPTIKM 353 (612)
T ss_dssp SCC-CHHHHHHHHHHTT------SSCTTCCCC--------------------CCCCCCC------------BCCEEEEEC
T ss_pred CCC-CHHHHHHHHHHHH------HCCCCCCCC--------------------CCCCCCC------------CCCCCCEEE
T ss_conf 873-2789999999998------534677767--------------------7888876------------454565877
Q ss_pred EECCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECCC
Q ss_conf 00488871000142210100000013566555665443334334677875444420111078889954799999960589
Q 003649 404 SILPDCKNVVFNTAKVAVQHTKMQMLPTGSKLLSWETYDEDISSLGESSTLTAIGLLEQINITRDTSDYLWYMTSVEISS 483 (805)
Q Consensus 404 silpdc~~v~~nta~v~~q~~~~~~~~~~~~~~~w~~~~e~~~~~~~~~~~~~~~~lEql~~t~d~sgYlwY~T~v~~~~ 483 (805)
.++++ .|+.+.+++.+. .+.+|||++| .+||+||+|+++...
T Consensus 354 ----------~~~~~------------------l~~~~~~~~~~~-------~p~~~E~l~q---~~gy~lY~t~i~~~~ 395 (612)
T 3d3a_A 354 ----------TEMAV------------------LFDNLPHPKESE-------DIRTMEAFDQ---GWGSILYRTSLSASD 395 (612)
T ss_dssp ----------CEEEE------------------GGGGCCCCEEES-------SCCBGGGGTC---CSSEEEEEEEECCBS
T ss_pred ----------EEEEE------------------HHHHCCCCCCCC-------CCCCHHHHCC---CCCEEEEEEEECCCC
T ss_conf ----------42615------------------888478863478-------9889999598---777599998854788
Q ss_pred CCCCCCCCCCCEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 81001589977156468450999999999999997434674038861012468977699998337952356788834442
Q 003649 484 SESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETG 563 (805)
Q Consensus 484 ~~~~~~~g~~~~L~v~~~~d~~~vfVNg~~vGs~~g~~~~~~~~~~~~i~l~~G~n~L~iLven~Gr~NyG~~~~~~~kG 563 (805)
..++|++.+++|++||||||+++|++++......+.+ ++..|.|+|+||||||||+|||+++ .++||
T Consensus 396 --------~~~~L~i~~~~D~a~Vfvng~~~G~~~~~~~~~~~~~----~~~~~~~~L~iLven~Gr~NyG~~~-~~~kG 462 (612)
T 3d3a_A 396 --------KEQTLLITEAHDWAQVFLNGKKLATLSRLKGEGVVKL----PPLKEGDRLDILVEAMGRMNFGKGI-YDWKG 462 (612)
T ss_dssp --------SCEEEEEEEEESEEEEEETTEEEEEEETTTTCCEEEE----CCBCTTEEEEEEEECCCCCCSGGGG-CCCCE
T ss_pred --------CCCEEEECCCCEEEEEEECCEEEEEEECCCCCCEEEE----ECCCCCCEEEEEEEECCCCCCCCCC-CCCCC
T ss_conf --------8754985478708999999999999981147726986----5378985899999956987668545-57987
Q ss_pred EEECEEECCCCCCCCCCCCCCCE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEE
Q ss_conf 00009993304888457548927-95058511123469998888865678755356677419999996899999718960
Q 003649 564 VRGAVVLHGLDHGNKDLTWQKWS-YQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPTGNEPLALDL 642 (805)
Q Consensus 564 I~G~V~l~g~~~g~~dLs~~~W~-y~vgL~gE~~~l~~~~~~~~~~W~~~~~~~~~~~~~twYkt~F~~p~g~dpv~Ldl 642 (805)
|+|+|+|++ ++++.+|+ +|+ |+++|++|.. ..+.|..... . .++|+|||++|++|++.| |||||
T Consensus 463 i~g~V~l~~-~~~~~~l~--~W~~y~l~l~~~~~--------~~~~~~~~~~--~-~~~p~~yk~~f~~~~~~D-t~Ld~ 527 (612)
T 3d3a_A 463 ITEKVELQS-DKGVELVK--DWQVYTIPVDYSFA--------RDKQYKQQEN--A-ENQPAYYRSTFNLNELGD-TFLNM 527 (612)
T ss_dssp EEEEEEEEE-TTEEEECC--CEEEEEECCCHHHH--------HSSCCBC--------CCCEEEEEEEEESSCCB-EEEEC
T ss_pred CCCCEEECC-CCCCEECC--CCEEEEECCCCCCC--------CCCCCCCCCC--C-CCCCEEEEEEEECCCCCC-EEEEC
T ss_conf 776269858-86743436--86699834676422--------2355345677--7-889889999998899873-89965
Q ss_pred CCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCE
Q ss_conf 89842999998822012120344698766666787677544678899810012048665557752899998438997424
Q 003649 643 RSMGKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCGHPTQRWYHVPRSWLKPTKNLLVVFEELGGDASRI 722 (805)
Q Consensus 643 ~gmgKG~vwVNG~~iGRYWp~~~~g~~~~c~y~G~~~~~kc~~~cg~PqQtlYhVP~~~Lk~g~N~LVifEe~gg~p~~I 722 (805)
+|||||+|||||+||||||+ +| |||||| ||++|||+|.|+||||||+|..+..|
T Consensus 528 ~g~gKG~vwVNG~nlGRYW~------------~G-------------PqqtlY-vP~~~Lk~g~N~ivvfE~~~~~~~~i 581 (612)
T 3d3a_A 528 MNWSKGMVWVNGHAIGRYWE------------IG-------------PQQTLY-VPGCWLKKGENEIIILDMAGPSKAET 581 (612)
T ss_dssp TTCCEEEEEETTEEEEEEET------------TC-------------SCCEEE-ECGGGCCSEEEEEEEEESSCCSSSEE
T ss_pred CCCCCEEEEECCEEEEEEEE------------CC-------------CEEEEE-ECHHHCCCCCCEEEEEEECCCCCCEE
T ss_conf 77873799998875890895------------29-------------889988-15899178974899999768988548
Q ss_pred EEEEECH
Q ss_conf 9983221
Q 003649 723 SLVKRSV 729 (805)
Q Consensus 723 ~~~t~~~ 729 (805)
+|.+..+
T Consensus 582 ~~~~~p~ 588 (612)
T 3d3a_A 582 EGLRQPI 588 (612)
T ss_dssp EEESSCC
T ss_pred EEECCCC
T ss_conf 8546655
No 5
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=1.00 E-value=1 Score=961.06 Aligned_cols=660 Identities=24% Similarity=0.372 Sum_probs=472.0
Q ss_pred CCCCEEEEEECCCEEECCEEEEEEEEEECCCCCC-HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCHHHH
Q ss_conf 2331239980671999797969999985199999-768999999999779988998210787799894134306200999
Q 003649 23 LIQCSTVTYDRKAILINGQRRILISGSIHYPRST-PEMWEDLIRKAKDGGLDVIDTYVFWNGHEPSPGHYNFEGSYDLVR 101 (805)
Q Consensus 23 ~~~~~~vt~d~~~~~idGk~~~l~sG~iHy~R~~-~~~W~~~l~k~Ka~GlNtV~tyv~Wn~hEp~~G~ydF~G~~dl~~ 101 (805)
...+..|+||+++|++||||++++||+|||+|+| |++|+|+|+|||++|+|+|++|||||.|||+||+|||+|++||++
T Consensus 20 ~~~~~~v~~d~~~~~idG~p~~i~sGeiHy~R~p~pe~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~ 99 (1003)
T 3og2_A 20 GPLQNIVTWDEHSLFVHGERVVIFSGEVHPFRLPVPSLYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEP 99 (1003)
T ss_dssp SCSSSSEEECSSCEEETTEEECEEEEEECGGGCCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHH
T ss_pred CCCCCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHH
T ss_conf 67761699818869999979899999888755998899999999999739988998516443489788735555555999
Q ss_pred HHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
Q ss_conf 99999982979997048411210288988807333698154138945699999999999999770533413698549862
Q 003649 102 FIKTVQRVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQ 181 (805)
Q Consensus 102 fl~la~~~GL~vilR~GPYicaEw~~GG~P~WL~~~p~~~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~Q 181 (805)
||++|+|+||+|||||||||||||++||+|.||++.|+ ++|++||.|++++++|+++|+++++ ++++++||||||+|
T Consensus 100 fl~la~e~GL~VILRpGPYi~aEw~~GG~P~WL~~~~~-~lRt~~p~yl~~~~~~~~~l~~~~~--~~~~~~GGpII~~Q 176 (1003)
T 3og2_A 100 FFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKG-KLRTDAPDYLHATDNYVAHIASIIA--KAQITNGGPVILYQ 176 (1003)
T ss_dssp HHHHHHHHTCEEEEEEESCCCTTBGGGGCCGGGGGCCS-CTTSCCHHHHHHHHHHHHHHHHHHH--HTBGGGTSSEEEEE
T ss_pred HHHHHHHCCCEEEECCCCCEEEECCCCCCCCHHCCCCC-EECCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEE
T ss_conf 99999985998993278633335278876621025997-0057998999999999999999987--76423799789997
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCC----CCCCCCCCC---------CCCCCCCCC-------
Q ss_conf 355657876457901399999999998708998552760788----999643237---------788755777-------
Q 003649 182 IENEYGPESKSLGAAGHAYVNWAAKMAVGLDTGVPWVMCKED----DAPDPVINS---------CNGFYCDAF------- 241 (805)
Q Consensus 182 IENEyg~~~~~~~~~~~~Y~~~l~~~~~~~g~~vP~~~~~~~----~~p~~vi~t---------~ng~~~~~~------- 241 (805)
||||||++.+.++.++++||+||++|+++.|++|||+||++. .+++.++.+ +++++|+++
T Consensus 177 VENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t~d~~~~~~~~~g~~~g~vdiyg~d~yp~g~~c~~~~~w~~~~ 256 (1003)
T 3og2_A 177 PENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPDNG 256 (1003)
T ss_dssp ESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBCCBSSSCCTTCTTSCTTCCSBCEEEECTTCSCTTSTTCCCTTC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 24545753344567778999999999997499367997688522465777655513330245666743036876555554
Q ss_pred ---------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-----HHHHCCCEEEEEEEECCCCCCCCCCC
Q ss_conf ---------9899999920121254224554898777897889999999-----99809911222265327897877999
Q 003649 242 ---------SPNKPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVAR-----FIQKGGSFFNYYMYHGGTNFGRTAGG 307 (805)
Q Consensus 242 ---------~~~~p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~a~~~~~-----~~~~g~s~~N~YM~hGGTNfG~~~G~ 307 (805)
.+.+|++|+||+|||+|||++||+++++|++++++.++++ +++.|+|++||||||||||||+|+ +
T Consensus 257 ~~~~~~~~~~~~~p~~P~~~~Ef~~GWfd~WG~~~~~~~~~~~~~~~~~~~~~~~l~~G~s~vN~YM~hGGTNFG~~~-~ 335 (1003)
T 3og2_A 257 LPTTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAAGVTIFNIYMTFGGTNWGNLG-H 335 (1003)
T ss_dssp SCCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHSSHHHHHHHHHHHHHTTCSEEEEEEEECCBCCTTCB-C
T ss_pred CHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC-C
T ss_conf 157799876512899982887001433343588877777334059999999999885688557888721646865357-9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---CCCCCCEEEEE--CCCCCEEEEEECCC
Q ss_conf 96334676899889789888624799999999997521134689994357---89853012320--49762123531157
Q 003649 308 PFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAIKLCEYALVSSDPTVTS---LGTYQQAHVFS--AGQQKCAAFLSNYN 382 (805)
Q Consensus 308 ~~~~TSYDydApl~E~G~~~~pKy~~lr~l~~~i~~~~~~l~~~~~~~~~---~~~~~~~~~y~--~~~~~~~~fl~n~~ 382 (805)
+.++|||||||||+|+|++++|||.++|.+|.|++.+.. ++..+|...+ ...+....++. ...+..+-|+.+.+
T Consensus 336 ~~~~TSYDYdAPL~E~G~~~t~Ky~~lK~l~~fl~~~~~-~l~~~~~~~~~~~~~~~~~i~~t~lr~~~~~~Fyvvrh~~ 414 (1003)
T 3og2_A 336 PGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVSPG-YITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRHAN 414 (1003)
T ss_dssp TTSCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTCTH-HHHSEECCCBSSSSSSCSSEEEEEEECSSSCEEEEEEESS
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHH-HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCC
T ss_conf 984133467884464677583478999999998753837-6455646588761348986389998648985599998157
Q ss_pred CC----CCEEEEEC--CEE---------EECCCCCEEECCC-----CCCEEECCCEE-----------------------
Q ss_conf 77----41289967--824---------2049973000488-----87100014221-----------------------
Q 003649 383 TK----SAARVTFN--GRQ---------YNLPPWSISILPD-----CKNVVFNTAKV----------------------- 419 (805)
Q Consensus 383 ~~----~~~~v~~~--~~~---------~~lp~~svsilpd-----c~~v~~nta~v----------------------- 419 (805)
.. ...+++.. ... .+|+.+...|++- ..+++|.||+|
T Consensus 415 ~~s~~~~~~~l~l~ts~G~~tiP~~~g~ltL~grdskI~vtdy~~g~~~L~YSTAevlT~~~~~~~~vlvlyg~~Ge~~E 494 (1003)
T 3og2_A 415 YSSTDTASYTVKLPTSAGDLTIPQLGGSLTLTGRDSKIHVTDYPVGKFTLLYSTAEIFTWNEFAEKTVLVLYGGAQELHE 494 (1003)
T ss_dssp TTCCSCEEECEEECCTTCCEEECTTSCCEEECTTCEEEEEEEEEETTEEEEEESSEEEEEEECSSCEEEEEEECTTCEEE
T ss_pred CCCCCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCEEEEEEECCCCCCEE
T ss_conf 88777612899942788767867889727888865559850132488489997241178899899889999788998348
Q ss_pred -----------------------------------EE-EC----------------------------------------
Q ss_conf -----------------------------------01-00----------------------------------------
Q 003649 420 -----------------------------------AV-QH---------------------------------------- 423 (805)
Q Consensus 420 -----------------------------------~~-q~---------------------------------------- 423 (805)
+- +.
T Consensus 495 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~l~v~l~dr~~A~~~W~~~~~~~~~~~~~~~ 574 (1003)
T 3og2_A 495 FAVKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTASSARQVVQLGSLVIYMVDRNSAYNYWVPTLPGSGKQSAYGS 574 (1003)
T ss_dssp EEESCCSTTCSSCCCEEEECSSCEEEECTTCCEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCBCCCSSTTGGGCS
T ss_pred EEEECCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECCCCEEEEEECCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 99933444456788736427870587468958999885379649999799999997068876413553468876454345
Q ss_pred --------------CCCC----------------------C-CCC----------------------------------C
Q ss_conf --------------0000----------------------1-356----------------------------------6
Q 003649 424 --------------TKMQ----------------------M-LPT----------------------------------G 432 (805)
Q Consensus 424 --------------~~~~----------------------~-~~~----------------------------------~ 432 (805)
-+|+ . .+. .
T Consensus 575 ~~~~~~~vlV~g~yLvRsA~~~g~~l~l~GD~~~tt~lev~~~p~~v~~v~wNG~~~~~~~~~~g~~~~~~~~~~~~i~l 654 (1003)
T 3og2_A 575 SLMNPDSVIINGGYLIRSVAIKGNALSVQADFNVTTPLEIIGIPKGISKLAVNGKELGYSVSELGDWIAHPAIEIPHVQV 654 (1003)
T ss_dssp CSSSCCBCEEECCSEEEEEEEETTEEEEEEEBSSCCCEEEESCCTTCCEEEETTEEECCEECTTSCEEECCCCCCCCCCC
T ss_pred CCCCCCCEEEECCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEEECCCCCCCCC
T ss_conf 67888728997883799989719999998435898137999368775489999998514863787579983277876548
Q ss_pred C--CCCCCCCC---CCCCCCCC--------CCC------CCCCC--CCHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCC
Q ss_conf 5--55665443---33433467--------787------54444--2011107888995479999996058981001589
Q 003649 433 S--KLLSWETY---DEDISSLG--------ESS------TLTAI--GLLEQINITRDTSDYLWYMTSVEISSSESFLRGG 491 (805)
Q Consensus 433 ~--~~~~w~~~---~e~~~~~~--------~~~------~~~~~--~~lEql~~t~d~sgYlwY~T~v~~~~~~~~~~~g 491 (805)
+ ..+.|... +|-.+..+ ... |...| .-..+++. ++|.+|||.+|.....+
T Consensus 655 P~L~~l~Wk~~dslPE~~~~ydDs~W~~A~~~~t~n~~~p~~~p~~Lya~dYGf---h~G~~wYRG~F~a~~~~------ 725 (1003)
T 3og2_A 655 PELTKLKWYKVDSLPEIRSNYDDSRWPLANLRTSNNTYAPLKTPVSLYGSDYGF---HAGTLLFRGRFTARTAR------ 725 (1003)
T ss_dssp CCGGGSCCEEEESCGGGSTTCCCTTSCBCCCSCCCCSSSCCCSSSCCBGGGGTC---CSSCEEEEEEEECSSSS------
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCC---CCCCEEEEEEEECCCCC------
T ss_conf 877888714227886568999843260667656568556789984757645676---44878986189778871------
Q ss_pred CCCEEEECC-CCEEEEEEECCEEEEEEECCCCC--CEEEEEECCCCCCC-CCEEEEEEECCCCC-CC--CCCCCCCCCCE
Q ss_conf 977156468-45099999999999999743467--40388610124689-77699998337952-35--67888344420
Q 003649 492 QKPTLTVES-AGHAVHVFINGQFLGSAFGTREN--RRFTFSGPANLRAG-INKIALLSIAVGLP-NV--GLHYETWETGV 564 (805)
Q Consensus 492 ~~~~L~v~~-~~d~~~vfVNg~~vGs~~g~~~~--~~~~~~~~i~l~~G-~n~L~iLven~Gr~-Ny--G~~~~~~~kGI 564 (805)
+...|.+++ .+-...|||||+|+|+..|.... .+++|++| .|+.| +|+|+++++|||+. ++ |..-.+.++||
T Consensus 726 ~~v~L~~~GG~af~~sVWLNG~flGs~~g~g~~~~~~~~~~lP-~L~~g~~NVLtV~vDn~G~d~~w~~G~d~~k~PRGi 804 (1003)
T 3og2_A 726 QQLFLSTQGGSAFASSVWLNDRFIGSFTGFDAASAANSSYTLD-RLVRGRRYILTVVVDSTGLDENWTTGDDSMKAPRGI 804 (1003)
T ss_dssp EEEEEEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEEC-SCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEE
T ss_pred EEEEEEECCCCCCCCEEEECCEEECCCCCCCCCCCCCEEEECC-CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 4899998151243448999997822554788656566699787-556799608999992887655646675544488750
Q ss_pred EECEEECCCCCCCCCCCCCCCEEEC------------------CCCCCCCCCCCCCCCCCCCCCCC--------CCCC-C
Q ss_conf 0009993304888457548927950------------------58511123469998888865678--------7553-5
Q 003649 565 RGAVVLHGLDHGNKDLTWQKWSYQV------------------GLKGEAMNLVSPSEATSVDWTRG--------SLAA-Q 617 (805)
Q Consensus 565 ~G~V~l~g~~~g~~dLs~~~W~y~v------------------gL~gE~~~l~~~~~~~~~~W~~~--------~~~~-~ 617 (805)
++ .+|.+.....+++ .|+.+. ||.+|+.++|+|. .+...|.+. +... .
T Consensus 805 ~~-~~l~g~~~~~~~~---~Wki~Gn~GGe~~~D~vRGplNeGGly~ER~GwHLPg-~~~~~W~~~~~~~~~~~sp~~g~ 879 (1003)
T 3og2_A 805 LD-YALTSSSGANVSI---SWKLTGNLGGEDYRDVFRGPLNEGGLFFERQGFHLPS-PPLSDFTHGPSSSSSSSSPLDGI 879 (1003)
T ss_dssp EE-EEEEETTSCBCCC---EEEEESSTTTTSCSCTTTCSSSCCSSHHHHHTTTSSS-CCGGGSBCCCTTSTTCCCTTTCB
T ss_pred EE-EECCCCCCCCCCC---EEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 00-0523788776630---5898413588656786656655886557741323898-89432332444544567845577
Q ss_pred CCCCCEEEEEEEEC--C-CCCC-CEEEEECCC-----CEEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66774199999968--9-9999-718960898-----4299999882201212034469876666678767754467889
Q 003649 618 GQQSLKWYKAYFDA--P-TGNE-PLALDLRSM-----GKGQVWINGQSIGRYWMAYAKGDCKTCSYAGTFRPINCQRRCG 688 (805)
Q Consensus 618 ~~~~~twYkt~F~~--p-~g~d-pv~Ldl~gm-----gKG~vwVNG~~iGRYWp~~~~g~~~~c~y~G~~~~~kc~~~cg 688 (805)
.....+||+|+|++ | ++.| |+.+.+..- -+-++||||+++|||-+. +|
T Consensus 880 ~~~Gv~fyrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gkyv~~-----------iG------------ 936 (1003)
T 3og2_A 880 AHAGIAFYAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGKYVSN-----------IG------------ 936 (1003)
T ss_dssp SSSEEEEEEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEEEETT-----------TC------------
T ss_pred CCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECEEEEEECCC-----------CC------------
T ss_conf 8884579987852689965671038999777988763589999702021022178-----------78------------
Q ss_pred CCCEEEEECCCCCCC-CCCCEEEE----EEECCCCCCCEEEEEE
Q ss_conf 981001204866555-77528999----9843899742499832
Q 003649 689 HPTQRWYHVPRSWLK-PTKNLLVV----FEELGGDASRISLVKR 727 (805)
Q Consensus 689 ~PqQtlYhVP~~~Lk-~g~N~LVi----fEe~gg~p~~I~~~t~ 727 (805)
||.+ |+||..+|+ .|.|+|.| +|+.|+.+..++++..
T Consensus 937 -PQt~-FpvP~GILn~~G~NtialalWa~~~~ga~~~~~~L~~~ 978 (1003)
T 3og2_A 937 -PQTE-FPVPEGILDYNGDNWIGVALWALESRGAKVPGLALKSK 978 (1003)
T ss_dssp -CCCE-EEECBTTBCTEEEEEEEEEEEECSTTCBCCSCEEEEEC
T ss_pred -CCCE-ECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEC
T ss_conf -8603-05992011279962699999842688887771599974
No 6
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=1.00 E-value=1 Score=313.60 Aligned_cols=187 Identities=17% Similarity=0.233 Sum_probs=146.9
Q ss_pred HHHHHHHHHHHHHCC-----CCCEEEEEECCCEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
Q ss_conf 999999999984102-----331239980671999797969999985199999768999999999779988998210787
Q 003649 9 LLTWLWMALLLGTEL-----IQCSTVTYDRKAILINGQRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNG 83 (805)
Q Consensus 9 ~~~~~~~~~~~~~~~-----~~~~~vt~d~~~~~idGk~~~l~sG~iHy~R~~~~~W~~~l~k~Ka~GlNtV~tyv~Wn~ 83 (805)
|++++.+|++.+... .....++.++.+|++||||++++||++|+++..++.+++++++||++|+|+|++||+|+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~~f~lnGkPf~i~gg~~H~~~~y~r~~~~~W~~mKa~G~NtVr~~V~W~~ 98 (552)
T 3u7v_A 19 LALALVCGPLASGAHAADAAMPQLVTKDGRHALMVDGAPFLMLAAQVNNSSAWPSQMAKVWPAIEKVGANTVQVPIAWEQ 98 (552)
T ss_dssp -----------------CCCCCEEEEETTEEEEEETTEEECEEEEECCTTCCSGGGHHHHHHHHHHHTCSEEEEEEEHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHC
T ss_conf 99999960000013455456982999789688989998999998870798886331199999999809988999862432
Q ss_pred CCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC---CCEEECCCCCE--EEECCC-----------H
Q ss_conf 7998941343062009999999998297999704841121028898---88073336981--541389-----------4
Q 003649 84 HEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEWNFGG---FPVWLKYVPGI--SFRTDN-----------G 147 (805)
Q Consensus 84 hEp~~G~ydF~G~~dl~~fl~la~~~GL~vilR~GPYicaEw~~GG---~P~WL~~~p~~--~~Rt~d-----------~ 147 (805)
|||+||+|||+ +|++||++|+++||+|||| ||+||++|| +|.||.++|++ ++|+.| +
T Consensus 99 hEP~~G~yDF~---~LD~~ldla~e~GL~VIL~----i~aeW~~ggta~~P~WL~~d~~~~P~vrt~dG~~~~~~sp~~p 171 (552)
T 3u7v_A 99 IEPVEGQFDFS---YLDLLLEQARERKVRLVLL----WFGTWKNSSPSYAPEWVKLDDKRFPRLIKDDGERSYSMSPLAK 171 (552)
T ss_dssp HCSBTTBCCCH---HHHHHHHHHHHTTCEEEEE----EEEEEETTBCTTSCHHHHTCTTTSCEEECTTSCEEEEECTTCH
T ss_pred CCCCCCCCCHH---HHHHHHHHHHHCCCEEEEE----ECCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCEEECCCCCCH
T ss_conf 48989846806---4999999999879999998----4120146887678805651766575248899967514798867
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 569999999999999977053341369854986235565787645790139999999999870
Q 003649 148 PFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAAKMAVG 210 (805)
Q Consensus 148 ~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEyg~~~~~~~~~~~~Y~~~l~~~~~~ 210 (805)
.|++++++|+++|+++|+ +.+ .+||||||||||||||++. +++.|++.+++.+++
T Consensus 172 ~yl~a~r~~~~~l~~~La--~r~-~~~p~VI~wQIeNEyG~~g-----~~~~Y~~~~~~aFR~ 226 (552)
T 3u7v_A 172 STLDADRKAFVALMTHLK--AKD-AAQKTVIMVQVENETGTYG-----SVRDFGPAAQKVFNG 226 (552)
T ss_dssp HHHHHHHHHHHHHHHHHH--HHH-TTTCCEEEEEEEESCSBSS-----CSSCCSHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHH--HHH-CCCCCEEEEEECCCCCCCC-----CCCHHHHHHHHHHHH
T ss_conf 899999999999999999--971-8999489999615677777-----732151999999998
No 7
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=1.00 E-value=1 Score=214.27 Aligned_cols=240 Identities=13% Similarity=0.112 Sum_probs=159.8
Q ss_pred EEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-CCEEEECCCCHHHHHHHHHHHCCCEEEECCCC
Q ss_conf 79699999851999997689999999997799889982107877998-94134306200999999999829799970484
Q 003649 41 QRRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYVFWNGHEPS-PGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGP 119 (805)
Q Consensus 41 k~~~l~sG~iHy~R~~~~~W~~~l~k~Ka~GlNtV~tyv~Wn~hEp~-~G~ydF~G~~dl~~fl~la~~~GL~vilR~GP 119 (805)
..++++.++.+....+++.|+++|++||++|+|+|+++|.|+.|||+ ||+|||+ .++++|++|+++||+||+++++
T Consensus 12 ~~~vmlp~~~v~~~~~~~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf~---~~d~~id~a~~~GL~viv~L~~ 88 (516)
T 1vem_A 12 KAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFS---YAQRFAQSVKNAGMKMIPIIST 88 (516)
T ss_dssp EEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCH---HHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEEECC
T ss_conf 7499805655289999999999999999739999998423454138899936369---9999999999779989999311
Q ss_pred CCCCC----CCCCCCCEEECCC-C--CEEEECCC----HHH-----HHHHHHHHHHHHHHHHCCCCCCCCCCCEEE----
Q ss_conf 11210----2889888073336-9--81541389----456-----999999999999997705334136985498----
Q 003649 120 YVCAE----WNFGGFPVWLKYV-P--GISFRTDN----GPF-----KVAMQGFTQKIVQMMKNEKLFASQGGPIIL---- 179 (805)
Q Consensus 120 YicaE----w~~GG~P~WL~~~-p--~~~~Rt~d----~~y-----~~~~~~~~~~i~~~i~~~~l~~~~gGpII~---- 179 (805)
|+|+| |.++++|.||.+. | ++.+++.+ +.+ -......+.++++.++ +.+..+ ++||+
T Consensus 89 h~c~g~~g~~~~~~lP~WL~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la--~r~~~~-~~vI~eI~v 165 (516)
T 1vem_A 89 HQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFA--AAMKPY-KDVIAKIYL 165 (516)
T ss_dssp SCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHH--HHTGGG-GGGBCCEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--HHHCCC-CCEEEEEEC
T ss_conf 01377767787789997787259964326688999898453542346763899999999999--997438-998999622
Q ss_pred ------------ECCCCCCCCCCC----CCC-CCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ------------623556578764----579-013999999999987089985527607889996432377887557779
Q 003649 180 ------------SQIENEYGPESK----SLG-AAGHAYVNWAAKMAVGLDTGVPWVMCKEDDAPDPVINSCNGFYCDAFS 242 (805)
Q Consensus 180 ------------~QIENEyg~~~~----~~~-~~~~~Y~~~l~~~~~~~g~~vP~~~~~~~~~p~~vi~t~ng~~~~~~~ 242 (805)
+|||||||.... .|. .+.+.+.+|+++.+ | +++-.. ....+ . ...|.
T Consensus 166 glG~~GelryPs~qv~NE~g~~g~~~~~~y~~~~~~~fr~~l~~~y---g-tl~~ln--------~aWg~--~--~~~~~ 229 (516)
T 1vem_A 166 SGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKY---G-SLNEVN--------KAWGT--K--LISEL 229 (516)
T ss_dssp CCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHH---S-SHHHHH--------HHHTC--C--CSSGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHC---C-CHHHHH--------HHHCC--C--CCCHH
T ss_conf 4553454356554333576787765420048999999999999862---8-777788--------97687--9--78898
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCE------EEEEEEECCCCCCCC
Q ss_conf 89-999992012125422455489877789788999999999809911------222265327897877
Q 003649 243 PN-KPYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSF------FNYYMYHGGTNFGRT 304 (805)
Q Consensus 243 ~~-~p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~a~~~~~~~~~g~s~------~N~YM~hGGTNfG~~ 304 (805)
.. .|..+ ..+++.||+++||........+.++..+.++++.+.++ +.+..--.|.+|-..
T Consensus 230 ~i~~P~~~--~~~~~~gw~s~~~~df~~f~s~~l~~~~~~~l~~a~~~f~~~~~~~~~~kv~g~hw~y~ 296 (516)
T 1vem_A 230 AILPPSDG--EQFLMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYN 296 (516)
T ss_dssp GCCSCSCH--HHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTT
T ss_pred HHCCCCCC--CCCCCCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCC
T ss_conf 82786556--54357983366507298856378999999999987875488768428998474201688
No 8
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=1.00 E-value=1 Score=212.80 Aligned_cols=284 Identities=15% Similarity=0.203 Sum_probs=193.9
Q ss_pred EEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECC-CCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCCC
Q ss_conf 96999998519999976899999999977998899821-07877998941343062009999999998297999704841
Q 003649 42 RRILISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYV-FWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPY 120 (805)
Q Consensus 42 ~~~l~sG~iHy~R~~~~~W~~~l~k~Ka~GlNtV~tyv-~Wn~hEp~~G~ydF~G~~dl~~fl~la~~~GL~vilR~GPY 120 (805)
+.++++|++|+.+++++.|+++|++||++|+|+|+++| .|+.+||++|+|||+ +|+++|++|+++||+|||+++++
T Consensus 7 ~~~~~G~~y~pe~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~f~---~ld~~i~~~~~~Gi~vil~~~~~ 83 (675)
T 3tty_A 7 PKIWYGGDYNPEQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYDFT---WLDDIIERLTKENIYLCLATSTG 83 (675)
T ss_dssp CSCEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSCBCCH---HHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCCEEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCHH---HHHHHHHHHHHCCCEEEEECCCC
T ss_conf 876570057916499899999999999739988999411244218769863889---99999999998799999967877
Q ss_pred CCCCCCCCCCCEEECCCC-CE--------EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 121028898880733369-81--------541389456999999999999997705334136985498623556578764
Q 003649 121 VCAEWNFGGFPVWLKYVP-GI--------SFRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEYGPESK 191 (805)
Q Consensus 121 icaEw~~GG~P~WL~~~p-~~--------~~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEyg~~~~ 191 (805)
.+.+|-...+|.||.... |. ....++|.|++++.+++++|++++++ +++||+|||+|||+.. +
T Consensus 84 ~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~-------~p~Vi~w~v~NE~g~~-~ 155 (675)
T 3tty_A 84 AHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKD-------HPQIVMWHVSNEYGGY-C 155 (675)
T ss_dssp SCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTT-------CTTEEEEECSSSCCCC-C
T ss_pred CCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC-------CCCEEEEEECCCCCCC-C
T ss_conf 7873344338751566689968036875678999999999999999999997388-------9968999975666787-6
Q ss_pred CCCCCHHHHHHHHHHHHHC-------CCC-------------CCCEE---------ECCCC-------------------
Q ss_conf 5790139999999999870-------899-------------85527---------60788-------------------
Q 003649 192 SLGAAGHAYVNWAAKMAVG-------LDT-------------GVPWV---------MCKED------------------- 223 (805)
Q Consensus 192 ~~~~~~~~Y~~~l~~~~~~-------~g~-------------~vP~~---------~~~~~------------------- 223 (805)
.+..+.++|.+||++++.. -|+ ..|-. +....
T Consensus 156 y~~~~~~~Fr~wLk~kY~ti~~LN~aWgt~fWs~~y~~w~ei~~P~~~~~~~~~~~~~~p~~~lD~~rF~~~~~~~~~~~ 235 (675)
T 3tty_A 156 YCDNCEKQFRVWLKERYGTLEALNKAWNTSFWSHTFYDWDEIVAPNALSEEWSGNRTNFQGISLDYRRFQSDSLLECFKM 235 (675)
T ss_dssp CSHHHHHHHHHHHHHHHSSHHHHHHHTTTTGGGCCCSSGGGCCCCSTTTTEETTTEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89899999999999886579999998675523575577987169856565544456678589999999999999999999
Q ss_pred -------CCCCCCCCCCC--C-CCC-C--------------CC-----------------CCCCCCCCCCCCCCCCCCCC
Q ss_conf -------99964323778--8-755-7--------------77-----------------98999999201212542245
Q 003649 224 -------DAPDPVINSCN--G-FYC-D--------------AF-----------------SPNKPYKPTLWTEAWSGWFT 261 (805)
Q Consensus 224 -------~~p~~vi~t~n--g-~~~-~--------------~~-----------------~~~~p~~P~~~tE~~~Gwf~ 261 (805)
..|+-.+ |.| + +.. | .+ +.....+|.+.+|..+| ..
T Consensus 236 ~~d~iR~~~P~~pv-t~N~~~~~~~~D~~~~a~~~Dvvs~D~Yp~~~~~~~~~a~~~dl~R~~~~g~p~~~mE~~~~-~~ 313 (675)
T 3tty_A 236 ERDELKRWTPDIPV-TTNLMGFYPELDYFKWAKEMDVVSWDNYPSMDTPFSFTAMAHNLMRGLKSGQPFMLMEQTPG-VQ 313 (675)
T ss_dssp HHHHHHHHCTTSCE-ECEECTTCTTSCHHHHHTTCSSCEEECCCCTTSCHHHHHHHHHHHHHTTTTCCEEEEECCSS-CC
T ss_pred HHHHHHHHCCCCCE-EECCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC-CC
T ss_conf 99999975899877-97626566776999996159899977888867888899989988876047998699657778-88
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 54898777897889999999998099112222653278978779999633467689988978988862479999999999
Q 003649 262 EFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLMRQPKYGHLKQLHEAI 341 (805)
Q Consensus 262 ~wG~~~~~r~~ed~a~~~~~~~~~g~s~~N~YM~hGGTNfG~~~G~~~~~TSYDydApl~E~G~~~~pKy~~lr~l~~~i 341 (805)
.|..-.....+..+....-..++.|+..+.|+-++... +-.-.| -.|.|+-.|.++++.|.+++++.+.+
T Consensus 314 ~w~~~~~~~~pg~~r~~~~~~~A~Ga~~v~~f~wr~~~---------~g~E~~-h~g~~~~~g~~~~r~~~ev~~~~~~l 383 (675)
T 3tty_A 314 NWQPYNSAKRPGVMRLWSYQAVAHGADTVMFFQLRRSV---------GACEKY-HGAVIEHVGHEHTRVFRECAELGKEL 383 (675)
T ss_dssp TTSSBCCCCCTTHHHHHHHHHHHTTEEEEEESCSBCCC---------SGGGTT-SCCSBCTTCSSCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC---------CCHHHH-HCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 88577888995099999999985625767634116888---------855665-02645878998846999999999999
Q ss_pred HHHHCCC
Q ss_conf 7521134
Q 003649 342 KLCEYAL 348 (805)
Q Consensus 342 ~~~~~~l 348 (805)
+..++.+
T Consensus 384 ~~l~~~~ 390 (675)
T 3tty_A 384 QQLGDTI 390 (675)
T ss_dssp HHHTTTT
T ss_pred HHHHHHH
T ss_conf 9756664
No 9
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=1.00 E-value=1 Score=206.94 Aligned_cols=271 Identities=14% Similarity=0.138 Sum_probs=188.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECC-CCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCC
Q ss_conf 99998519999976899999999977998899821-07877998941343062009999999998297999704841121
Q 003649 45 LISGSIHYPRSTPEMWEDLIRKAKDGGLDVIDTYV-FWNGHEPSPGHYNFEGSYDLVRFIKTVQRVGLYAHLRIGPYVCA 123 (805)
Q Consensus 45 l~sG~iHy~R~~~~~W~~~l~k~Ka~GlNtV~tyv-~Wn~hEp~~G~ydF~G~~dl~~fl~la~~~GL~vilR~GPYica 123 (805)
++++++|+.+++++.|++++++||++|+|+|++++ .|+.+||+||+|||+ +|+++|++|+++||+||++..
T Consensus 1 ~~G~~y~pe~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~d~~---~ld~~ld~a~~~Gi~vil~~~----- 72 (645)
T 1kwg_A 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG---WLDEAIATLAAEGLKVVLGTP----- 72 (645)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCH---HHHHHHHHHHTTTCEEEEECS-----
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCHH---HHHHHHHHHHHCCCEEEEECC-----
T ss_conf 977767966589789999999999829988999245142048889945869---999999999978998999589-----
Q ss_pred CCCCCCCCEEECC-CCCEE----------------EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC
Q ss_conf 0288988807333-69815----------------413894569999999999999977053341369854986235565
Q 003649 124 EWNFGGFPVWLKY-VPGIS----------------FRTDNGPFKVAMQGFTQKIVQMMKNEKLFASQGGPIILSQIENEY 186 (805)
Q Consensus 124 Ew~~GG~P~WL~~-~p~~~----------------~Rt~d~~y~~~~~~~~~~i~~~i~~~~l~~~~gGpII~~QIENEy 186 (805)
.+++|.|+.. .|+.. ...+++.|++++++++++|+++++++ +.||+|||+||+
T Consensus 73 ---~~~~P~Wl~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~-------p~V~~w~i~NE~ 142 (645)
T 1kwg_A 73 ---TATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGL-------EAVAGFQTDNEY 142 (645)
T ss_dssp ---TTSCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTC-------TTEEEEECSSST
T ss_pred ---CCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC-------CCEEEEEECCCC
T ss_conf ---8889856762598526667998676667645679999999999999999999985999-------818999936867
Q ss_pred CCCC---CCCCCCHHH--------------------------------------------------------------HH
Q ss_conf 7876---457901399--------------------------------------------------------------99
Q 003649 187 GPES---KSLGAAGHA--------------------------------------------------------------YV 201 (805)
Q Consensus 187 g~~~---~~~~~~~~~--------------------------------------------------------------Y~ 201 (805)
+... +.+..+.++ |+
T Consensus 143 ~~~~~~~~y~~~~~~~f~~wL~~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~~~ 222 (645)
T 1kwg_A 143 GCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFN 222 (645)
T ss_dssp TTTTTSCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 77878886899999999999998866999999875745234555768554898766777884788889999999999999
Q ss_pred HHHHHHHHCCCCCCCEEECCCCCC-C-C-----CCCCCCC-CCCCC---C-----------CC-CCC-------------
Q ss_conf 999999870899855276078899-9-6-----4323778-87557---7-----------79-899-------------
Q 003649 202 NWAAKMAVGLDTGVPWVMCKEDDA-P-D-----PVINSCN-GFYCD---A-----------FS-PNK------------- 245 (805)
Q Consensus 202 ~~l~~~~~~~g~~vP~~~~~~~~~-p-~-----~vi~t~n-g~~~~---~-----------~~-~~~------------- 245 (805)
+++++.+++.+.++|.+++..... . + +.++... ..|.. . |. ...
T Consensus 223 ~~~~~~ir~~~p~~pvt~n~~~~~~~~d~~~~a~~lDv~~~d~Y~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~dl~r~ 302 (645)
T 1kwg_A 223 RLQVEILRAHAPGKFVTHNFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYRG 302 (645)
T ss_dssp HHHHHHHHHHSTTCEEECEECTTCCSSCHHHHGGGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999868998579847767777689998744959997778864444333333211123456755677777778876
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -9999201212542245548987778978899999999980991122226532789787799996334676899889789
Q 003649 246 -PYKPTLWTEAWSGWFTEFGGAVHRRPVQDLAFAVARFIQKGGSFFNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYG 324 (805)
Q Consensus 246 -p~~P~~~tE~~~Gwf~~wG~~~~~r~~ed~a~~~~~~~~~g~s~~N~YM~hGGTNfG~~~G~~~~~TSYDydApl~E~G 324 (805)
..+|.+.+|+..|..+ |+.......+..+.......++.|+..++|+-+ - ..++...+|+++ .|++.|
T Consensus 303 ~~~kP~~i~E~~~~~~~-w~~~~~~~~pg~~r~~~~~~~a~Ga~~~~~f~w--------~-~~~~~~E~~~~g-~l~~~g 371 (645)
T 1kwg_A 303 VGRGRFWVMEQQPGPVN-WAPHNPSPAPGMVRLWTWEALAHGAEVVSYFRW--------R-QAPFAQEQMHAG-LHRPDS 371 (645)
T ss_dssp HTTTCEEEEEECCSCCS-SSSSCCCCCTTHHHHHHHHHHHTTCSCEEEECS--------B-CCSSSTTTTSCC-SBCTTS
T ss_pred HCCCCEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEE--------C-CCCCCCCCCCCC-CCCCCC
T ss_conf 05998798568888888-766788899309999999998557877888631--------2-689971014434-338789
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 888624799999999997521
Q 003649 325 LMRQPKYGHLKQLHEAIKLCE 345 (805)
Q Consensus 325 ~~~~pKy~~lr~l~~~i~~~~ 345 (805)
.+ +++|..++++...++..+
T Consensus 372 ~~-~~~~~e~~~~~~~l~~~~ 391 (645)
T 1kwg_A 372 AP-DQGFFEAKRVAEELAALA 391 (645)
T ss_dssp CB-CHHHHHHHHHHHHHHTCC
T ss_pred CC-CHHHHHHHHHHHHHHHHC
T ss_conf 92-889999999999998633
No 10
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=1.00 E-value=1 Score=173.41 Aligned_cols=181 Identities=18% Similarity=0.335 Sum_probs=137.7
Q ss_pred EECCCEEECCEEEEEEEEEECCCCC-CHHHHHHHHHHHHHCCCCEEEECCCC----------CCCCCCCCEEE-------
Q ss_conf 8067199979796999998519999-97689999999997799889982107----------87799894134-------
Q 003649 31 YDRKAILINGQRRILISGSIHYPRS-TPEMWEDLIRKAKDGGLDVIDTYVFW----------NGHEPSPGHYN------- 92 (805)
Q Consensus 31 ~d~~~~~idGk~~~l~sG~iHy~R~-~~~~W~~~l~k~Ka~GlNtV~tyv~W----------n~hEp~~G~yd------- 92 (805)
.++..|.+||||+.+.+..+||.+. +++.|++.|+.||++|+|+|++++|| ..+||.+|+||
T Consensus 15 ~~g~~F~ldGkp~~f~G~N~y~~~~~~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~ 94 (383)
T 3pzg_A 15 VPRGSHMLNGKEFRFIGSNNYYMHYKSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISN 94 (383)
T ss_dssp ------------CCEEEEECSCTTTSCHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSS
T ss_pred CCCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 04998989999999988870245669999999999999976998899701156555566665433667985464334442
Q ss_pred -ECCCCHHHHHHHHHHHCCCEEEECCCCCCCCCC-CCCCCCEEECCCCCE--EEECCCHHHHHHHHHHHHHHHHHHHCC-
Q ss_conf -306200999999999829799970484112102-889888073336981--541389456999999999999997705-
Q 003649 93 -FEGSYDLVRFIKTVQRVGLYAHLRIGPYVCAEW-NFGGFPVWLKYVPGI--SFRTDNGPFKVAMQGFTQKIVQMMKNE- 167 (805)
Q Consensus 93 -F~G~~dl~~fl~la~~~GL~vilR~GPYicaEw-~~GG~P~WL~~~p~~--~~Rt~d~~y~~~~~~~~~~i~~~i~~~- 167 (805)
.++-..|+++|++|+++||+|||.+ +.+| .+||.|.|+....+. ...-+|+.++++.+++++.|++++...
T Consensus 95 ~~~~~~~LD~~i~~A~k~GI~viL~l----~~~w~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~t 170 (383)
T 3pzg_A 95 AQNGFERLDYTIAKAKELGIKLIIVL----VNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYT 170 (383)
T ss_dssp CEEHHHHHHHHHHHHHHHTCEEEEEC----CBSSSTTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTT
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEC----CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 47899999999999998899899973----66654557864113324898635556899999999999999985535456
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHH---HHHHCCCCCCCEE
Q ss_conf 33413698549862355657876457901399999999---9987089985527
Q 003649 168 KLFASQGGPIILSQIENEYGPESKSLGAAGHAYVNWAA---KMAVGLDTGVPWV 218 (805)
Q Consensus 168 ~l~~~~gGpII~~QIENEyg~~~~~~~~~~~~Y~~~l~---~~~~~~g~~vP~~ 218 (805)
.+.+++.+.|++|||.||+++... ..+..+.+|++ +..|+.+...|.+
T Consensus 171 G~~y~~~p~I~~w~l~NEp~~~~~---~~~~~~~~w~~~~~~~IR~~Dp~~lVt 221 (383)
T 3pzg_A 171 GVPYREEPTIMAWELANELRCETD---KSGNTLVEWVKEMSSYIKSLDPNHLVA 221 (383)
T ss_dssp CCBGGGCTTEEEEESCBTCCCTTC---TTSHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred CCCCCCCCCEEEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 731079985789995377776667---647999999999999999658996699
Done!