Query 003650
Match_columns 805
No_of_seqs 782 out of 2879
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 03:26:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003650.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003650hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 1E-123 2E-128 1082.8 34.5 784 1-805 5-848 (975)
2 PF03859 CG-1: CG-1 domain; I 100.0 1.8E-63 4E-68 449.6 9.8 117 25-142 2-118 (118)
3 KOG4412 26S proteasome regulat 99.9 2.4E-22 5.3E-27 194.4 9.0 134 535-676 37-173 (226)
4 KOG4412 26S proteasome regulat 99.8 6.7E-21 1.4E-25 184.5 10.7 132 534-673 70-203 (226)
5 PHA02791 ankyrin-like protein; 99.8 6.7E-19 1.5E-23 189.5 16.0 130 534-673 92-225 (284)
6 PHA02791 ankyrin-like protein; 99.8 1.2E-18 2.7E-23 187.5 15.2 130 534-673 59-191 (284)
7 KOG0509 Ankyrin repeat and DHH 99.8 1.1E-18 2.4E-23 196.9 13.5 131 534-672 76-208 (600)
8 PHA02743 Viral ankyrin protein 99.8 1.9E-18 4.2E-23 171.9 13.9 133 535-673 19-159 (166)
9 PHA02875 ankyrin repeat protei 99.8 3E-18 6.5E-23 194.1 17.2 130 534-671 100-231 (413)
10 PHA02859 ankyrin repeat protei 99.8 1.1E-17 2.3E-22 172.9 16.7 132 534-673 49-190 (209)
11 PHA02875 ankyrin repeat protei 99.8 8.2E-18 1.8E-22 190.5 16.0 147 518-672 46-198 (413)
12 KOG0509 Ankyrin repeat and DHH 99.8 2.2E-18 4.8E-23 194.4 11.1 149 520-675 91-245 (600)
13 PHA02741 hypothetical protein; 99.8 8.7E-18 1.9E-22 167.6 13.6 127 534-668 19-158 (169)
14 PHA03100 ankyrin repeat protei 99.7 1.8E-17 3.9E-22 191.1 15.2 144 519-670 155-311 (480)
15 PHA02878 ankyrin repeat protei 99.7 3E-17 6.4E-22 189.8 16.5 131 536-676 168-301 (477)
16 PHA02736 Viral ankyrin protein 99.7 9.9E-18 2.2E-22 164.2 10.6 129 534-669 15-153 (154)
17 PHA02874 ankyrin repeat protei 99.7 5.2E-17 1.1E-21 185.5 17.9 141 534-676 122-289 (434)
18 PHA02878 ankyrin repeat protei 99.7 3E-17 6.6E-22 189.7 15.5 114 553-672 149-265 (477)
19 PHA03095 ankyrin-like protein; 99.7 6.9E-17 1.5E-21 185.7 17.5 131 534-670 185-318 (471)
20 PLN03192 Voltage-dependent pot 99.7 2.2E-16 4.8E-21 193.8 22.8 129 537-673 526-686 (823)
21 PHA03100 ankyrin repeat protei 99.7 5.1E-17 1.1E-21 187.4 15.8 152 516-675 117-283 (480)
22 KOG0508 Ankyrin repeat protein 99.7 2.1E-17 4.5E-22 179.5 11.3 138 517-663 94-236 (615)
23 PHA02798 ankyrin-like protein; 99.7 6.4E-17 1.4E-21 187.6 16.2 157 520-677 89-293 (489)
24 PHA02874 ankyrin repeat protei 99.7 7E-17 1.5E-21 184.4 16.1 149 515-671 43-219 (434)
25 PHA02876 ankyrin repeat protei 99.7 2.3E-16 5.1E-21 190.1 18.8 136 533-675 338-476 (682)
26 PHA02716 CPXV016; CPX019; EVM0 99.7 1.4E-16 3E-21 189.6 16.2 136 534-675 210-399 (764)
27 KOG0508 Ankyrin repeat protein 99.7 4.3E-17 9.3E-22 177.1 10.5 130 534-671 82-212 (615)
28 PHA02859 ankyrin repeat protei 99.7 2.3E-16 5.1E-21 162.8 14.4 129 536-674 21-157 (209)
29 KOG4177 Ankyrin [Cell wall/mem 99.7 1.3E-16 2.7E-21 193.3 13.6 251 398-668 377-632 (1143)
30 PHA02716 CPXV016; CPX019; EVM0 99.7 2.1E-16 4.5E-21 188.1 15.3 152 517-674 152-351 (764)
31 PHA03095 ankyrin-like protein; 99.7 4.1E-16 8.9E-21 179.3 16.4 125 536-668 47-180 (471)
32 PHA02946 ankyin-like protein; 99.7 3.7E-16 8.1E-21 179.0 15.7 128 536-671 105-238 (446)
33 PHA02989 ankyrin repeat protei 99.7 4.8E-16 1E-20 180.6 16.8 137 535-673 107-287 (494)
34 PHA02884 ankyrin repeat protei 99.7 3.5E-16 7.6E-21 169.0 14.5 121 535-663 31-158 (300)
35 PHA02795 ankyrin-like protein; 99.7 3.3E-16 7.2E-21 175.7 14.8 146 517-670 128-290 (437)
36 PHA02946 ankyin-like protein; 99.7 7.6E-16 1.6E-20 176.5 17.2 134 533-675 69-208 (446)
37 PHA02876 ankyrin repeat protei 99.7 8.4E-16 1.8E-20 185.3 16.8 129 535-670 272-403 (682)
38 PHA02989 ankyrin repeat protei 99.7 9.8E-16 2.1E-20 177.9 15.8 151 517-673 47-216 (494)
39 KOG0510 Ankyrin repeat protein 99.7 4E-16 8.7E-21 179.0 12.0 135 534-673 271-408 (929)
40 KOG0512 Fetal globin-inducing 99.7 5E-16 1.1E-20 149.8 10.7 124 538-668 65-191 (228)
41 KOG0502 Integral membrane anky 99.6 2.8E-16 6E-21 156.6 8.3 130 534-672 158-288 (296)
42 PHA02798 ankyrin-like protein; 99.6 1.2E-15 2.7E-20 176.9 13.9 150 517-674 48-218 (489)
43 KOG0502 Integral membrane anky 99.6 4.7E-16 1E-20 154.9 7.5 128 536-672 129-256 (296)
44 KOG0514 Ankyrin repeat protein 99.6 9E-16 2E-20 162.6 8.6 131 535-674 267-406 (452)
45 PHA02917 ankyrin-like protein; 99.6 7E-15 1.5E-19 175.4 16.4 124 536-668 103-256 (661)
46 KOG0195 Integrin-linked kinase 99.6 2.1E-15 4.5E-20 155.2 9.5 127 533-667 31-158 (448)
47 PF12796 Ank_2: Ankyrin repeat 99.6 5.9E-15 1.3E-19 130.7 10.9 88 574-671 1-88 (89)
48 PHA02917 ankyrin-like protein; 99.6 9.9E-15 2.1E-19 174.1 15.5 152 518-674 46-228 (661)
49 KOG0514 Ankyrin repeat protein 99.6 6.3E-15 1.4E-19 156.3 11.8 140 520-665 281-430 (452)
50 PHA02795 ankyrin-like protein; 99.6 9.5E-15 2.1E-19 164.0 13.9 132 534-675 114-254 (437)
51 KOG4177 Ankyrin [Cell wall/mem 99.6 6.9E-15 1.5E-19 178.4 12.6 144 527-678 465-609 (1143)
52 PF12796 Ank_2: Ankyrin repeat 99.6 1.5E-14 3.2E-19 128.1 10.4 86 540-631 1-87 (89)
53 PHA02730 ankyrin-like protein; 99.6 2.7E-14 5.8E-19 167.4 14.9 143 519-668 358-524 (672)
54 PHA02741 hypothetical protein; 99.6 1.7E-14 3.6E-19 144.0 11.2 105 563-673 14-130 (169)
55 KOG0195 Integrin-linked kinase 99.5 4.8E-15 1E-19 152.5 5.7 127 541-674 5-132 (448)
56 KOG0505 Myosin phosphatase, re 99.5 1.6E-14 3.4E-19 160.5 9.6 134 533-674 70-263 (527)
57 cd01175 IPT_COE IPT domain of 99.5 3.5E-14 7.6E-19 120.8 8.3 72 366-444 2-74 (85)
58 KOG0510 Ankyrin repeat protein 99.5 1.5E-13 3.1E-18 158.3 14.3 122 534-663 185-327 (929)
59 KOG0505 Myosin phosphatase, re 99.5 5.5E-14 1.2E-18 156.1 10.5 139 538-678 42-234 (527)
60 PHA02743 Viral ankyrin protein 99.5 6.4E-14 1.4E-18 139.5 9.7 107 560-672 10-125 (166)
61 PHA02792 ankyrin-like protein; 99.5 1.4E-13 3E-18 160.0 13.5 143 519-669 320-480 (631)
62 cd00204 ANK ankyrin repeats; 99.5 5E-13 1.1E-17 122.9 14.0 121 534-662 5-126 (126)
63 PHA02884 ankyrin repeat protei 99.5 2.2E-13 4.7E-18 147.4 12.4 106 564-675 26-137 (300)
64 PHA02730 ankyrin-like protein; 99.5 1.9E-13 4.2E-18 160.3 12.6 133 534-669 39-182 (672)
65 PLN03192 Voltage-dependent pot 99.5 2.6E-13 5.7E-18 166.8 14.3 115 530-652 552-699 (823)
66 COG0666 Arp FOG: Ankyrin repea 99.5 5.4E-13 1.2E-17 135.1 12.8 123 535-665 72-203 (235)
67 KOG0515 p53-interacting protei 99.4 2.1E-13 4.4E-18 149.9 8.9 119 539-664 553-674 (752)
68 PHA02736 Viral ankyrin protein 99.4 3.2E-13 6.9E-18 132.3 8.3 97 534-630 53-153 (154)
69 KOG0507 CASK-interacting adapt 99.4 2.4E-13 5.2E-18 155.5 7.9 125 535-667 48-173 (854)
70 TIGR00870 trp transient-recept 99.4 5.6E-13 1.2E-17 162.4 11.8 154 508-667 54-242 (743)
71 KOG0512 Fetal globin-inducing 99.4 5.6E-13 1.2E-17 128.9 8.9 121 533-664 94-217 (228)
72 KOG4214 Myotrophin and similar 99.4 4.3E-13 9.3E-18 117.2 7.0 104 539-650 5-108 (117)
73 TIGR00870 trp transient-recept 99.4 4.7E-13 1E-17 163.1 10.0 130 534-665 126-280 (743)
74 KOG1710 MYND Zn-finger and ank 99.4 2.1E-12 4.6E-17 133.4 10.9 124 533-664 9-134 (396)
75 PHA02792 ankyrin-like protein; 99.4 2E-12 4.4E-17 150.4 12.2 132 526-664 61-239 (631)
76 KOG4214 Myotrophin and similar 99.3 7.7E-12 1.7E-16 109.4 8.2 95 572-673 4-98 (117)
77 cd00204 ANK ankyrin repeats; 99.3 3.6E-11 7.8E-16 110.5 12.4 99 565-669 2-100 (126)
78 PF13857 Ank_5: Ankyrin repeat 99.3 2.9E-12 6.3E-17 104.3 4.4 55 589-649 1-56 (56)
79 PF13637 Ank_4: Ankyrin repeat 99.3 7.9E-12 1.7E-16 100.7 6.4 54 570-623 1-54 (54)
80 PTZ00322 6-phosphofructo-2-kin 99.3 1.3E-11 2.9E-16 148.0 11.2 105 538-650 84-196 (664)
81 KOG3676 Ca2+-permeable cation 99.2 2.6E-11 5.7E-16 140.8 11.3 122 535-664 183-330 (782)
82 KOG0507 CASK-interacting adapt 99.2 1.2E-11 2.7E-16 141.8 8.2 131 538-676 5-149 (854)
83 PTZ00322 6-phosphofructo-2-kin 99.2 2.9E-11 6.2E-16 145.2 11.8 87 572-664 84-170 (664)
84 PF13857 Ank_5: Ankyrin repeat 99.2 9E-12 2E-16 101.4 4.6 51 560-610 5-56 (56)
85 KOG3676 Ca2+-permeable cation 99.2 7.6E-11 1.6E-15 137.1 10.3 127 534-667 141-298 (782)
86 PF13637 Ank_4: Ankyrin repeat 99.1 7.7E-11 1.7E-15 94.9 6.2 54 603-662 1-54 (54)
87 COG0666 Arp FOG: Ankyrin repea 99.1 5.4E-10 1.2E-14 113.1 14.0 106 560-671 63-176 (235)
88 KOG0515 p53-interacting protei 99.1 2.8E-10 6E-15 125.7 8.4 90 573-668 553-642 (752)
89 KOG4369 RTK signaling protein 99.0 3.8E-10 8.2E-15 132.6 8.8 249 398-668 760-1053(2131)
90 PF01833 TIG: IPT/TIG domain; 99.0 7.6E-10 1.6E-14 96.8 7.5 83 366-452 2-85 (85)
91 KOG0520 Uncharacterized conser 99.0 1.2E-09 2.7E-14 130.1 10.2 257 536-803 608-927 (975)
92 KOG4369 RTK signaling protein 99.0 3.3E-10 7.1E-15 133.1 5.2 123 535-665 756-880 (2131)
93 cd01179 IPT_plexin_repeat2 Sec 99.0 2.5E-09 5.3E-14 94.7 9.3 82 366-453 2-84 (85)
94 cd00102 IPT Immunoglobulin-lik 98.9 8E-09 1.7E-13 91.4 9.0 83 366-453 2-88 (89)
95 KOG0818 GTPase-activating prot 98.8 1.3E-08 2.9E-13 111.9 10.0 97 563-665 120-223 (669)
96 KOG1710 MYND Zn-finger and ank 98.8 1.4E-08 3E-13 105.6 8.5 87 534-622 43-131 (396)
97 KOG0783 Uncharacterized conser 98.7 7.2E-09 1.6E-13 119.6 3.6 83 563-651 45-128 (1267)
98 KOG0782 Predicted diacylglycer 98.7 6.4E-08 1.4E-12 107.7 9.2 121 538-665 868-990 (1004)
99 KOG0506 Glutaminase (contains 98.6 4.7E-08 1E-12 107.4 5.8 94 567-666 503-597 (622)
100 cd00603 IPT_PCSR IPT domain of 98.6 2.9E-07 6.4E-12 82.0 9.2 84 366-453 2-89 (90)
101 KOG0506 Glutaminase (contains 98.5 8E-08 1.7E-12 105.6 5.8 94 535-629 505-599 (622)
102 KOG0705 GTPase-activating prot 98.5 2.7E-07 5.8E-12 103.6 7.9 93 538-631 626-722 (749)
103 cd01180 IPT_plexin_repeat1 Fir 98.5 7.2E-07 1.6E-11 80.5 8.8 86 366-453 2-93 (94)
104 PF13606 Ank_3: Ankyrin repeat 98.5 1.7E-07 3.7E-12 66.3 3.7 29 602-630 1-29 (30)
105 KOG0818 GTPase-activating prot 98.4 4.1E-07 9E-12 100.4 8.0 88 536-624 133-221 (669)
106 smart00429 IPT ig-like, plexin 98.4 6.4E-07 1.4E-11 79.7 7.7 83 365-452 2-89 (90)
107 KOG0522 Ankyrin repeat protein 98.3 9.5E-07 2.1E-11 99.0 7.7 87 538-624 22-109 (560)
108 KOG0705 GTPase-activating prot 98.3 1.6E-06 3.4E-11 97.6 8.2 91 574-670 628-722 (749)
109 PF00023 Ank: Ankyrin repeat H 98.3 9.6E-07 2.1E-11 63.7 4.0 30 602-631 1-30 (33)
110 PF13606 Ank_3: Ankyrin repeat 98.3 1E-06 2.3E-11 62.3 4.0 30 569-598 1-30 (30)
111 PF00023 Ank: Ankyrin repeat H 98.3 1.2E-06 2.6E-11 63.2 4.4 33 569-601 1-33 (33)
112 KOG0522 Ankyrin repeat protein 98.2 3.1E-06 6.8E-11 95.0 7.8 87 572-664 22-110 (560)
113 cd01181 IPT_plexin_repeat3 Thi 98.1 8.5E-06 1.9E-10 74.3 7.5 59 366-427 2-61 (99)
114 KOG0521 Putative GTPase activa 98.1 3.7E-06 8.1E-11 101.6 6.3 100 559-664 643-744 (785)
115 cd02849 CGTase_C_term Cgtase ( 98.1 1.8E-05 3.8E-10 69.5 8.6 79 365-452 3-81 (81)
116 KOG2384 Major histocompatibili 98.0 7.6E-06 1.6E-10 81.2 6.2 68 560-627 2-70 (223)
117 KOG0783 Uncharacterized conser 97.8 8.3E-06 1.8E-10 95.0 2.7 73 596-674 45-118 (1267)
118 KOG3609 Receptor-activated Ca2 97.8 5.5E-05 1.2E-09 89.5 9.3 127 535-670 24-159 (822)
119 KOG0511 Ankyrin repeat protein 97.8 4.9E-05 1.1E-09 82.2 7.1 58 573-630 39-96 (516)
120 KOG2384 Major histocompatibili 97.7 5.7E-05 1.2E-09 75.1 6.3 67 593-665 2-69 (223)
121 KOG0160 Myosin class V heavy c 97.7 0.00018 3.8E-09 86.9 10.6 79 715-804 674-755 (862)
122 cd00604 IPT_CGTD IPT domain (d 97.6 0.00027 5.9E-09 62.0 8.2 79 366-453 2-80 (81)
123 KOG0511 Ankyrin repeat protein 97.4 0.00025 5.3E-09 76.9 5.9 67 605-677 38-104 (516)
124 PF00612 IQ: IQ calmodulin-bin 97.3 0.00028 6.2E-09 45.6 3.4 21 767-787 1-21 (21)
125 KOG0521 Putative GTPase activa 97.2 0.00026 5.6E-09 86.0 4.3 90 534-625 654-744 (785)
126 KOG0782 Predicted diacylglycer 97.2 0.00047 1E-08 77.7 5.5 89 534-624 897-988 (1004)
127 KOG2505 Ankyrin repeat protein 96.8 0.018 4E-07 64.9 13.4 62 583-650 404-471 (591)
128 PTZ00014 myosin-A; Provisional 96.6 0.0031 6.7E-08 77.5 6.7 38 767-804 777-814 (821)
129 KOG3836 HLH transcription fact 96.3 0.0018 3.8E-08 74.8 2.2 209 366-631 244-457 (605)
130 smart00015 IQ Short calmodulin 96.3 0.0034 7.4E-08 42.8 2.7 21 767-787 3-23 (26)
131 smart00248 ANK ankyrin repeats 96.1 0.0083 1.8E-07 39.4 3.8 27 603-629 2-28 (30)
132 KOG0160 Myosin class V heavy c 96.1 0.006 1.3E-07 74.1 4.8 40 765-804 671-710 (862)
133 smart00248 ANK ankyrin repeats 95.4 0.027 5.8E-07 36.8 4.0 29 569-597 1-29 (30)
134 KOG3609 Receptor-activated Ca2 95.3 0.029 6.3E-07 67.2 6.5 88 535-631 61-159 (822)
135 KOG0164 Myosin class I heavy c 95.2 0.029 6.3E-07 65.6 6.0 41 763-804 692-732 (1001)
136 KOG0164 Myosin class I heavy c 94.9 0.058 1.3E-06 63.2 7.2 60 714-788 696-755 (1001)
137 cd00602 IPT_TF IPT domain of e 94.9 0.097 2.1E-06 47.9 7.3 82 366-453 2-100 (101)
138 KOG3610 Plexins (functional se 94.8 0.064 1.4E-06 66.5 7.9 87 362-454 140-230 (1025)
139 KOG2505 Ankyrin repeat protein 94.8 0.04 8.8E-07 62.2 5.6 59 553-611 406-471 (591)
140 cd01178 IPT_NFAT IPT domain of 94.4 0.11 2.4E-06 47.3 6.4 82 364-453 1-100 (101)
141 PF00612 IQ: IQ calmodulin-bin 93.6 0.044 9.5E-07 35.4 1.6 15 790-804 1-15 (21)
142 cd01176 IPT_RBP-Jkappa IPT dom 93.4 0.21 4.6E-06 44.2 6.0 66 381-453 20-96 (97)
143 PF08549 SWI-SNF_Ssr4: Fungal 93.2 0.18 4E-06 59.4 7.0 101 33-142 30-154 (669)
144 cd01177 IPT_NFkappaB IPT domai 92.9 0.37 8E-06 44.0 7.0 82 366-453 2-101 (102)
145 COG5022 Myosin heavy chain [Cy 91.5 0.6 1.3E-05 59.4 8.8 76 715-798 746-824 (1463)
146 smart00015 IQ Short calmodulin 87.4 0.32 6.9E-06 33.0 1.3 16 789-804 2-17 (26)
147 PTZ00014 myosin-A; Provisional 82.6 2.7 5.8E-05 52.3 7.1 19 767-785 800-818 (821)
148 COG5022 Myosin heavy chain [Cy 82.1 2.7 5.8E-05 53.9 6.8 44 761-804 739-782 (1463)
149 PF06128 Shigella_OspC: Shigel 79.1 6.3 0.00014 41.1 7.2 95 570-668 179-280 (284)
150 PF08763 Ca_chan_IQ: Voltage g 77.7 2.5 5.3E-05 31.0 2.7 19 768-786 10-28 (35)
151 KOG4427 E3 ubiquitin protein l 75.4 7.4 0.00016 46.7 7.2 26 763-788 26-51 (1096)
152 KOG0162 Myosin class I heavy c 72.7 6.6 0.00014 47.0 6.0 37 760-796 689-725 (1106)
153 PF06128 Shigella_OspC: Shigel 66.3 9 0.00019 40.0 4.7 92 536-629 179-280 (284)
154 KOG3836 HLH transcription fact 61.8 7.2 0.00016 46.0 3.5 46 560-605 419-464 (605)
155 KOG0942 E3 ubiquitin protein l 60.3 17 0.00038 44.7 6.4 32 762-793 24-55 (1001)
156 KOG0163 Myosin class VI heavy 58.9 21 0.00046 43.0 6.6 31 768-798 814-844 (1259)
157 KOG3610 Plexins (functional se 58.6 11 0.00024 47.5 4.6 76 362-438 47-126 (1025)
158 PF03158 DUF249: Multigene fam 53.8 41 0.00088 34.3 6.8 111 538-663 47-191 (192)
159 PF03158 DUF249: Multigene fam 51.7 22 0.00048 36.1 4.6 46 573-624 146-191 (192)
160 KOG2128 Ras GTPase-activating 44.6 69 0.0015 41.6 8.3 38 767-804 592-636 (1401)
161 KOG1709 Guanidinoacetate methy 41.1 22 0.00047 37.2 2.7 48 622-675 1-48 (271)
162 KOG0161 Myosin class II heavy 41.0 43 0.00094 45.4 6.1 40 765-804 771-813 (1930)
163 PF11929 DUF3447: Domain of un 41.0 42 0.00091 28.8 4.2 48 571-625 7-54 (76)
164 PF09099 Qn_am_d_aIII: Quinohe 40.3 81 0.0018 27.8 5.8 63 366-437 3-70 (81)
165 PF14545 DBB: Dof, BCAP, and B 39.5 99 0.0021 30.3 6.8 67 370-442 3-78 (142)
166 PF03106 WRKY: WRKY DNA -bindi 38.6 13 0.00028 30.8 0.6 9 76-84 2-10 (60)
167 PF11929 DUF3447: Domain of un 37.3 49 0.0011 28.3 4.0 47 605-664 8-54 (76)
168 smart00774 WRKY DNA binding do 32.1 18 0.00038 30.0 0.4 9 76-84 2-10 (59)
169 COG4674 Uncharacterized ABC-ty 23.6 84 0.0018 32.7 3.5 45 398-442 8-55 (249)
170 KOG2128 Ras GTPase-activating 23.1 1.7E+02 0.0038 38.2 6.8 25 767-791 622-646 (1401)
171 PF01913 FTR: Formylmethanofur 23.0 34 0.00074 33.3 0.6 20 69-89 119-138 (144)
172 TIGR03437 Soli_cterm Solibacte 23.0 2.5E+02 0.0053 29.5 6.9 63 379-441 4-75 (215)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=1e-123 Score=1082.81 Aligned_cols=784 Identities=38% Similarity=0.599 Sum_probs=559.7
Q ss_pred CccccccccccCCCCCchhhHHHHHHHHHHhcCChhHHHHHHhcCccceeccCCCCCCCCccEEeeehhhhhcccccCcc
Q 003650 1 MAELLVGSEIHGFHTLKDLDVANMMEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHN 80 (805)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~w~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~~~~r~~~~~~~~dg~~ 80 (805)
+++++..++++.|.+.+.||+..|++|+++|||+|+||++||+||++|.|+++||+||.|||+||||||+|||||||||+
T Consensus 5 ~~n~~~is~~l~~~sl~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~ 84 (975)
T KOG0520|consen 5 SSNRHIISIILPFKSLQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHN 84 (975)
T ss_pred cccccccceeechhhhhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchh
Confidence 35688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeccCCCchhhhhhhcccCCEeeEEEEeeecCCCCcceeeEeecccCCCCceEEEeccccCCCCCC----C----CCCC
Q 003650 81 WKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETHEGTPA----T----PPNS 152 (805)
Q Consensus 81 w~~~~~~~~~~e~~~~lk~~~~~~~~~~y~~~~~~~~f~rr~y~~~~~~~~~~vlvhy~~~~~g~~~----~----~~~~ 152 (805)
|||||||||||||||||||||+|+||||||||+++||||||||||||+.++||||||||||++.+.. . ++.+
T Consensus 85 WkKkkDGKtirEaHe~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~~~~~~~~s~~s 164 (975)
T KOG0520|consen 85 WKKKKDGKTIREAHEKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAKGAGEIFSSIIS 164 (975)
T ss_pred hhhcCCCCcChHHHHhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccccccCcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999984321 1 1111
Q ss_pred CCC-C---CCCCCCCcc-----cccccCCCCCCcCCCCCccccCCCCCccccccccccccccccc-cccccccCCCCCCC
Q 003650 153 HSS-S---ISDQSAPLL-----LSEEFNSGAGHAYSAGGKELQAPNESLTVQNHEMRLHELNTLE-WDDLVVTNDSNDST 222 (805)
Q Consensus 153 ~~~-~---~~~~~~~~~-----~~~~~~s~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 222 (805)
+.. + ...++++++ ..+++++..+.+ .+.......+ ...+|...+++.++.+ |..++.+.++....
T Consensus 165 d~~~S~~~~~~q~~~~~~~~~s~~~~v~~i~s~~----~~~~~g~~~~-~s~~h~i~~~~~~s~~~~~~~p~s~~s~~~~ 239 (975)
T KOG0520|consen 165 DKAWSLNQLAGQLSPIFHNHSSVNEDVAEINSNQ----TGNALGSVFG-NSRNHRIRLHEVNSLDPLYKLPVSDDSLNLS 239 (975)
T ss_pred cccccHHHhhcccCcchhcccchHHHHHHHhhhc----cccccccccC-cchhhhhcccccCCccccccccccCCccccc
Confidence 110 0 111222211 112222221100 0000001111 1235666777776665 77776654432222
Q ss_pred CCCCCCCccccccccccccCCCCCCCCCCCCCCcc-cccCCCCc-CCCCCCccCCCC--------ccccCCccccccccc
Q 003650 223 EPRGDKFSHFDQQNHTAIKGAASNGSFFPSHDSYA-EVSSGGCL-TSLSQPIDRSNN--------TQFNNLDGVYSELMG 292 (805)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 292 (805)
.+....+ .+.....-..+.++........... +....++. ....+.+.+..+ +....++...+...+
T Consensus 240 ~~~~~~~---~~~~~~~~~rs~~~s~~te~l~n~~~~~~~~g~s~s~~l~~i~~~~~~~~~~~~~p~~~nf~~~ss~~s~ 316 (975)
T KOG0520|consen 240 APKPIDL---PKGPTSVKQRSSSPSYFTEILGNAPSGLVSQGNSLSSSLQRISSFTGLDNAAYEQPNSQNFEPNSSLNSH 316 (975)
T ss_pred cCCCccc---ccCCcchhhcCCCCcchhhhcccCCCcccccccccccchhhcccccccccccccCCccccccccccCCCC
Confidence 2211110 0000000000000000000000000 00000000 000111100000 000000001111100
Q ss_pred cccc--cccccccCCcccCCC-c----cc-ccccCCCCCcchhhhhhhhhhCCCCCC-------CC----CCCCCCCCCC
Q 003650 293 TQSS--VSSQRNEFGEVCTGD-S----LD-ILAGDGLQSQDSFGKWMNYIMTDSPGS-------VD----DPVLEPSISS 353 (805)
Q Consensus 293 ~~~~--~~~~~~~~~~~~~~~-~----~~-~~~~~~~~~~~sf~~w~~~~~~~~~~~-------~~----~~~~~~~~~~ 353 (805)
..+. ....+.++++....+ . .+ .+.++++++.|+|.+||+.....+... .- +++.++.+
T Consensus 317 ~~~~~~g~g~~~~~~sa~~~~~P~~~~~~~~~~~~~l~sgdsf~~~~~t~~e~~d~~q~~s~~~~~~p~~~~~~~~~s-- 394 (975)
T KOG0520|consen 317 VTGQSYGQGLQARSPSATSESRPITSAADAALSELGLKSGDSFSRWASTFGEISDLGQDPSGEAVWTPENDPMGPPGS-- 394 (975)
T ss_pred ccccccCccccCCCcccccccCCcchhhccccccccccccccccchhhhhcccccCCCCCccccccccCCCcCCCccc--
Confidence 0000 000111222211111 1 22 356889999999999999743322211 11 11122222
Q ss_pred CCCCCCCCCcceeeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeecceeeccccceeeeCCCCCCCeeE
Q 003650 354 GHHQFTVPEHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFL 433 (805)
Q Consensus 354 ~~~~s~~~~~~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph~~G~V~ 433 (805)
..+|| +++|+|+|+||||+|+|++||+||+|+|++. +.+..+|+||||+++|||++|++||||||||||.||.|+
T Consensus 395 ~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~~----~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~ 469 (975)
T KOG0520|consen 395 FLSPS-SPEQLFTITDFSPEWSYLDGGVKVLVTGFPQ----DETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVN 469 (975)
T ss_pred ccCCC-CCcceeeeeccCcccccCCCCcEEEEecCcc----ccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEE
Confidence 34555 3499999999999999999999999999733 335899999999999999999999999999999999999
Q ss_pred EEEEeC-CCCccccccccccCCCC--cccCCCCccccchhhHHHHHHHHHHHHhccccccccccCCCCCCchHHHhh--h
Q 003650 434 LYMSLD-GHKPISQVLNFEYRSPQ--LHAPVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSSKVPPNSLKEAKK--F 508 (805)
Q Consensus 434 l~v~~~-n~~~~se~~~Feyr~~~--~~~~~~~~~~~~~~~el~l~~Rl~~ll~~~~~~lqil~~k~~~~~l~d~~~--~ 508 (805)
|||+|+ ++..|+++++|+|...+ .+++.+ -++...++.++.||..++.... +++.++..+....+... +
T Consensus 470 l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s---~~d~~~~~sl~~rl~~~~~r~~---~~~~s~~~~~n~~~~~~~~l 543 (975)
T KOG0520|consen 470 LQVTCRISGLACSEVREFAYLVQPSQQIDKLS---WEDFLFQMSLLHRLETMLNRKQ---SILSSKPSTENTSDAESGNL 543 (975)
T ss_pred EEEEecccceeeeeehheeecccCcccccccc---cccchhhhHHHHHHHHHHHHhH---hHhhccCCccccccccchhH
Confidence 999999 89999999999999743 223222 1122345566666666654222 35566777777777776 8
Q ss_pred hhhhhcccCCHHH-HHHHhCCCCCCcccccchHHHHHHcCCcHHHHHHHHHc--CCCCCccCCCCChHHHHHHHcCCHHH
Q 003650 509 ASKSTCISNSWAY-LFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWA 585 (805)
Q Consensus 509 a~~i~~~~~~~~~-li~~l~~~~~~~~~~~t~L~~Aa~~~~l~~~lv~~Ll~--Gadin~~D~~G~T~LH~Aa~~G~~~~ 585 (805)
+.+++...+.|.+ +++....+.......+..++...++..+..||++.+++ |......|.+|+..+|++|..|+.++
T Consensus 544 ~skv~~l~~~~~~r~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA 623 (975)
T KOG0520|consen 544 ASKVVHLLNEWAYRLLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWA 623 (975)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCcee
Confidence 8999999999999 88888777777776666777666777778999999999 55566699999999999999999999
Q ss_pred HHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcc
Q 003650 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (805)
Q Consensus 586 v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~G 665 (805)
+.+.+..|..++.+|.+||||||||+.+||..++..|++.|++.+++|||+..+..|.|+.++|..+|+.++..+|.++.
T Consensus 624 ~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~ 703 (975)
T KOG0520|consen 624 FLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKA 703 (975)
T ss_pred EEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhH
Confidence 98888999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCcccccccc-ccccccccccchhhcccC---CcchhhhhhhhHHHHHhHHHHHHHHHHHHhhhhHHHHHHH-hhcCC
Q 003650 666 LVAQFNDMTLAG-NISGSLQTGSTITVDTQN---LTEDEVYLKDTLSAYRTAAEAAARIQAAFREHSLKVQTKA-IRFSS 740 (805)
Q Consensus 666 a~~~~~~~~l~~-~i~~~~~~~~~~~~~~~~---~~~~~~slkd~LaA~r~Aa~aA~~iQ~afR~~s~r~R~q~-~~~~~ 740 (805)
+..++.++.+.+ +++.......+....... -..+..+|+|.|+|+|+|++||+|||.+||+..++++... +..+.
T Consensus 704 L~~~~~~~~~~~~~~s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~~ 783 (975)
T KOG0520|consen 704 LSAHLSNLELADPNLSADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDAT 783 (975)
T ss_pred HHHHHhhccccccccCCCchhhhhhhccCCCCCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhhc
Confidence 888888888777 454444443333331211 1233345999999999999999999999999999954443 33334
Q ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhccC
Q 003650 741 PEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQVILLCIVL 805 (805)
Q Consensus 741 ~~~~a~~l~Aa~~iq~~~r~~~~~~~~~AAv~IQ~~~Rg~~~Rk~f~~~r~~~v~IQ~~~Rg~~~ 805 (805)
+...+..+...++++.+|+.+..+....||..||+.|||||.|++|+.+|+.+|+||+++|||++
T Consensus 784 ~~~i~~~~~~~m~~~~a~~~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~ 848 (975)
T KOG0520|consen 784 KEQISEELAVSMKASSAFSMCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQV 848 (975)
T ss_pred chhhhhhhhhhhhcccchhcCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhH
Confidence 55555778888999999988888888999999999999999999999999999999999999985
No 2
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=100.00 E-value=1.8e-63 Score=449.61 Aligned_cols=117 Identities=62% Similarity=1.077 Sum_probs=114.5
Q ss_pred HHHHHHhcCChhHHHHHHhcCccceeccCCCCCCCCccEEeeehhhhhcccccCccceeccCCCchhhhhhhcccCCEee
Q 003650 25 MEEAKTRWLRPNEIHAILCNSKYFSINAKPVNLPKSGTVVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEER 104 (805)
Q Consensus 25 ~~~~~~~w~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~~~~r~~~~~~~~dg~~w~~~~~~~~~~e~~~~lk~~~~~~ 104 (805)
++| ++|||+|+||++||+||++|.+..+||++|+|||+|||||+++||||||||+|||||||||||||||||||||+|+
T Consensus 2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~ 80 (118)
T PF03859_consen 2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV 80 (118)
T ss_pred chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence 455 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeecCCCCcceeeEeecccCCCCceEEEeccccC
Q 003650 105 IHVYYAHGEDSPTFVRRCYWLLDKTLENIVLVHYRETH 142 (805)
Q Consensus 105 ~~~~y~~~~~~~~f~rr~y~~~~~~~~~~vlvhy~~~~ 142 (805)
|||||||||+|||||||||||||++|+||||||||||+
T Consensus 81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence 99999999999999999999999999999999999985
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.87 E-value=2.4e-22 Score=194.39 Aligned_cols=134 Identities=19% Similarity=0.165 Sum_probs=114.6
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc--CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHC-CCCCCcccCCCCchhhHHH
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWS-GLSLDFRDKYGWTALHWAA 611 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~--Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~-Gadvn~~D~~G~TpLh~Aa 611 (805)
++++|||+||..|+.+ ++.+|+. +..+|.+|..||||||.||..|+.++|+.|+.+ |+|+|..++.|.|+||+|+
T Consensus 37 D~Rt~LHwa~S~g~~e--iv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAa 114 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVE--IVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAA 114 (226)
T ss_pred cCCceeeeeeecCchh--HHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhh
Confidence 6888999999888877 7888875 778888888899999999999999999988876 8999999889999999999
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCccccccc
Q 003650 612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 676 (805)
Q Consensus 612 ~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l~ 676 (805)
..|+.+|+++|++.||.+++ +|..|.||||-|+.-|..+++++|+..|+..+..+....
T Consensus 115 gK~r~eIaqlLle~ga~i~~------kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~ 173 (226)
T KOG4412|consen 115 GKGRLEIAQLLLEKGALIRI------KDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGF 173 (226)
T ss_pred cCChhhHHHHHHhcCCCCcc------cccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCc
Confidence 99999999999999988888 888999999999999999999999988877666555443
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=6.7e-21 Score=184.47 Aligned_cols=132 Identities=23% Similarity=0.246 Sum_probs=123.3
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc--CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHH
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~--Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa 611 (805)
+.|.+|||.||..|+.+ +++-|+. |+++|..+..|+|+|||||..|..+++++|++.|+.|+.+|..|.||||-||
T Consensus 70 daGWtPlhia~s~g~~e--vVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAA 147 (226)
T KOG4412|consen 70 DAGWTPLHIAASNGNDE--VVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAA 147 (226)
T ss_pred ccCCchhhhhhhcCcHH--HHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHH
Confidence 45889999999999876 6666665 9999999999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcccc
Q 003650 612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (805)
Q Consensus 612 ~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~ 673 (805)
.-|..+++++|+..||.+|. +|..|.||||.|...|+.+++.+|+++|++..+.+.
T Consensus 148 avGklkvie~Li~~~a~~n~------qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edk 203 (226)
T KOG4412|consen 148 AVGKLKVIEYLISQGAPLNT------QDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDK 203 (226)
T ss_pred hccchhhHHHHHhcCCCCCc------ccccCccHHHHHHhccCchHHHHHHHhccceeeccc
Confidence 99999999999999999998 999999999999888999999999999988776655
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.80 E-value=6.7e-19 Score=189.52 Aligned_cols=130 Identities=13% Similarity=0.040 Sum_probs=87.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCC-hHHHHHHHcCCHHHHHHHHHCCCCCCccc-CCCCchhhHH
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQ-GVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTALHWA 610 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~-T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D-~~G~TpLh~A 610 (805)
..+.||||.|+..++.. ++++|++ |++++..+..|+ ||||+|+..|+.++|++|+..|.+. .| ..|+||||+|
T Consensus 92 ~~G~TpLh~Aa~~g~~e--ivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~A 167 (284)
T PHA02791 92 DKGNTALYYAVDSGNMQ--TVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHIT 167 (284)
T ss_pred CCCCCHHHHHHHcCCHH--HHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHH
Confidence 34667777777777665 5666666 777776666663 6777777777777777777665432 22 2367777777
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcH-HHHHHHcCCHHHHHHHHHcccccCcccc
Q 003650 611 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNA-ADIASKKGFDGLAAFLSEQALVAQFNDM 673 (805)
Q Consensus 611 a~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~Tp-L~lA~~~g~~~iv~lLle~Ga~~~~~~~ 673 (805)
+..|+.++|++||++||+++. +|..|.|| ||+|+..|+.+++++|+++|++.+..+.
T Consensus 168 a~~g~~eiv~lLL~~gAd~n~------~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~ 225 (284)
T PHA02791 168 IKNGHVDMMILLLDYMTSTNT------NNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL 225 (284)
T ss_pred HHcCCHHHHHHHHHCCCCCCc------ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc
Confidence 777777777777777777766 56666665 7777777777777777777766655444
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=99.78 E-value=1.2e-18 Score=187.46 Aligned_cols=130 Identities=18% Similarity=0.215 Sum_probs=117.3
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCC-chhhHHH
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGW-TALHWAA 611 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~-TpLh~Aa 611 (805)
.++.||||.|+..++.. ++++|+. |++++.+|..|+||||+||..|+.+++++|+.+|++++.++..|+ ||||+|+
T Consensus 59 ~d~~TpLh~Aa~~g~~e--iV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa 136 (284)
T PHA02791 59 LENEFPLHQAATLEDTK--IVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAV 136 (284)
T ss_pred CCCCCHHHHHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHH
Confidence 35689999999999977 7888887 999999999999999999999999999999999999999999986 8999999
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcccccCcccc
Q 003650 612 YYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (805)
Q Consensus 612 ~~G~~~iV~~LL~~GAd~n~~td~~~~d-~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~ 673 (805)
..|+.++|++|++.|++. .| ..|.||||+|+..|+.+++++|+++|++.+..+.
T Consensus 137 ~~g~~eivk~LL~~~~~~--------~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~ 191 (284)
T PHA02791 137 MLNDVSIVSYFLSEIPST--------FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNS 191 (284)
T ss_pred HcCCHHHHHHHHhcCCcc--------cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Confidence 999999999999987643 22 3589999999999999999999999998776644
No 7
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.78 E-value=1.1e-18 Score=196.88 Aligned_cols=131 Identities=25% Similarity=0.317 Sum_probs=111.1
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccC-CCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHH
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D-~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa 611 (805)
.++.+.||.||+++++. ++++|++ |+++|..+ .-|.|||||||+.|+..+|.+|+++|||++.+|..|.||||+||
T Consensus 76 ~~g~tlLHWAAiNNrl~--v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~ 153 (600)
T KOG0509|consen 76 REGVTLLHWAAINNRLD--VARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAA 153 (600)
T ss_pred cCCccceeHHHHcCcHH--HHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHH
Confidence 36778889999988887 7888888 88888877 67888999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCccc
Q 003650 612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 672 (805)
Q Consensus 612 ~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~ 672 (805)
..|+.-+|.+||.+|+++|. +|.+|+|||++|+.+|+...++.|+..|+.....+
T Consensus 154 ~~~~~~~vayll~~~~d~d~------~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d 208 (600)
T KOG0509|consen 154 QFGHTALVAYLLSKGADIDL------RDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTD 208 (600)
T ss_pred HhCchHHHHHHHHhcccCCC------cCCCCCCHHHHHHHhcccHHHHHHHHhcccccccc
Confidence 99999888899888888888 88889999999988888887888888886554443
No 8
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.78 E-value=1.9e-18 Score=171.91 Aligned_cols=133 Identities=22% Similarity=0.184 Sum_probs=117.3
Q ss_pred cccchHHHHHHcCCcHH--HHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHH---HHHHHHCCCCCCccc-CCCCchh
Q 003650 535 EAKDSFFELTLKSKLKE--WLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWA---ILLFSWSGLSLDFRD-KYGWTAL 607 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~--~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~---v~~LL~~Gadvn~~D-~~G~TpL 607 (805)
++.+.||.||..+++.. .+++.|.+ |++++..|..|+||||+||..|+.++ +++|+..|+++|.+| ..|+|||
T Consensus 19 ~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpL 98 (166)
T PHA02743 19 DEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLL 98 (166)
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHH
Confidence 46689999999999753 14445566 88999999999999999999998654 789999999999998 4899999
Q ss_pred hHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcccc
Q 003650 608 HWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (805)
Q Consensus 608 h~Aa~~G~~~iV~~LL~-~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~ 673 (805)
|+|+..|+.+++++|+. .|++++. +|..|.||||+|+..++.+++++|+++|++.+..+.
T Consensus 99 h~A~~~g~~~iv~~Ll~~~gad~~~------~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~ 159 (166)
T PHA02743 99 HIAASTKNYELAEWLCRQLGVNLGA------INYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLS 159 (166)
T ss_pred HHHHHhCCHHHHHHHHhccCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccc
Confidence 99999999999999995 8999998 889999999999999999999999999988765544
No 9
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.78 E-value=3e-18 Score=194.12 Aligned_cols=130 Identities=19% Similarity=0.203 Sum_probs=120.1
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHh
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~ 612 (805)
.++.||||.|+..++.. ++++|++ |++++..+..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 100 ~~g~tpL~~A~~~~~~~--iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~ 177 (413)
T PHA02875 100 KDGMTPLHLATILKKLD--IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMA 177 (413)
T ss_pred CCCCCHHHHHHHhCCHH--HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 45789999999999987 7888888 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCC-CcHHHHHHHcCCHHHHHHHHHcccccCcc
Q 003650 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKKGFDGLAAFLSEQALVAQFN 671 (805)
Q Consensus 613 ~G~~~iV~~LL~~GAd~n~~td~~~~d~~G-~TpL~lA~~~g~~~iv~lLle~Ga~~~~~ 671 (805)
.|+.+++++|++.|++++. .+..| .||+|+|+..|+.+++++|+++|++.+..
T Consensus 178 ~g~~eiv~~Ll~~ga~~n~------~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~ 231 (413)
T PHA02875 178 KGDIAICKMLLDSGANIDY------FGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIM 231 (413)
T ss_pred cCCHHHHHHHHhCCCCCCc------CCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchH
Confidence 9999999999999999998 55666 58999999999999999999999987653
No 10
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.76 E-value=1.1e-17 Score=172.85 Aligned_cols=132 Identities=14% Similarity=0.073 Sum_probs=115.9
Q ss_pred ccccchHHHHHHcC--CcHHHHHHHHHc-CCCCCccC-CCCChHHHHHHHc---CCHHHHHHHHHCCCCCCcccCCCCch
Q 003650 534 PEAKDSFFELTLKS--KLKEWLLERVVE-GSKTTEYD-VHGQGVIHLCAML---GYTWAILLFSWSGLSLDFRDKYGWTA 606 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~--~l~~~lv~~Ll~-Gadin~~D-~~G~T~LH~Aa~~---G~~~~v~~LL~~Gadvn~~D~~G~Tp 606 (805)
..+.||||.|+..+ +.+ ++++|++ |+++|.++ ..|.||||+|+.. ++.+++++|+++|+++|.+|..|.||
T Consensus 49 ~~g~TpLh~a~~~~~~~~e--iv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~Tp 126 (209)
T PHA02859 49 DLYETPIFSCLEKDKVNVE--ILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNL 126 (209)
T ss_pred ccCCCHHHHHHHcCCCCHH--HHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 45789999999865 444 8888888 99999987 5899999998864 47999999999999999999999999
Q ss_pred hhHHHh--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHH-HHHcCCHHHHHHHHHcccccCcccc
Q 003650 607 LHWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADI-ASKKGFDGLAAFLSEQALVAQFNDM 673 (805)
Q Consensus 607 Lh~Aa~--~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~l-A~~~g~~~iv~lLle~Ga~~~~~~~ 673 (805)
||+|+. .++.+++++|++.|++++. +|..|.||||. |+..++.+++++|+++|++.+..+.
T Consensus 127 Lh~a~~~~~~~~~iv~~Li~~gadin~------~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~ 190 (209)
T PHA02859 127 LHMYMCNFNVRINVIKLLIDSGVSFLN------KDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNK 190 (209)
T ss_pred HHHHHHhccCCHHHHHHHHHcCCCccc------ccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCC
Confidence 999876 4689999999999999998 88999999996 5668899999999999988766544
No 11
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.75 E-value=8.2e-18 Score=190.54 Aligned_cols=147 Identities=17% Similarity=0.197 Sum_probs=127.5
Q ss_pred CHHHHHHHhCCCCC----CcccccchHHHHHHcCCcHHHHHHHHHc-CCCCC-ccCCCCChHHHHHHHcCCHHHHHHHHH
Q 003650 518 SWAYLFKSVGDKRT----SLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTT-EYDVHGQGVIHLCAMLGYTWAILLFSW 591 (805)
Q Consensus 518 ~~~~li~~l~~~~~----~~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin-~~D~~G~T~LH~Aa~~G~~~~v~~LL~ 591 (805)
+..++++.+...+. ....+.+|||.|+..|+.. +++.|++ |++++ ..+..|.||||+|+..|+.+++++|++
T Consensus 46 ~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~--~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~ 123 (413)
T PHA02875 46 RDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVK--AVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIA 123 (413)
T ss_pred CCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHH--HHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHh
Confidence 33445555543332 2345789999999999987 6777777 87665 467789999999999999999999999
Q ss_pred CCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcc
Q 003650 592 SGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 671 (805)
Q Consensus 592 ~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~ 671 (805)
.|++++.++..|+||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|+++|++.+..
T Consensus 124 ~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~------~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~ 197 (413)
T PHA02875 124 RGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI------EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYF 197 (413)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcC
Confidence 9999999999999999999999999999999999999998 8899999999999999999999999999988765
Q ss_pred c
Q 003650 672 D 672 (805)
Q Consensus 672 ~ 672 (805)
+
T Consensus 198 ~ 198 (413)
T PHA02875 198 G 198 (413)
T ss_pred C
Confidence 4
No 12
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.75 E-value=2.2e-18 Score=194.42 Aligned_cols=149 Identities=21% Similarity=0.221 Sum_probs=129.3
Q ss_pred HHHHHHhCCCCCC-----cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCC
Q 003650 520 AYLFKSVGDKRTS-----LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG 593 (805)
Q Consensus 520 ~~li~~l~~~~~~-----~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~G 593 (805)
.++++.+.+.+.+ -..+.||||+||.+|++. ++.+|++ |+|++.+|.+|.||||+||..|+.-+|.+||..|
T Consensus 91 l~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~--vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~ 168 (600)
T KOG0509|consen 91 LDVARYLISHGADVNAIGGVLGSTPLHWAARNGHIS--VVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG 168 (600)
T ss_pred HHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHH--HHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhc
Confidence 3455555333333 234679999999999998 7888888 9999999999999999999999999999999999
Q ss_pred CCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcccc
Q 003650 594 LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (805)
Q Consensus 594 advn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~ 673 (805)
+++|.+|.+|+|||||||..|+...++.||..|+.++.. .|..|.||||+|+..|+..++.+|++.|++....+.
T Consensus 169 ~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~-----d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~ 243 (600)
T KOG0509|consen 169 ADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLT-----DDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNT 243 (600)
T ss_pred ccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccc-----ccccCCchHHHHHhcCCcceEehhhhcCCccccccc
Confidence 999999999999999999999999899999999999983 248999999999999999999988888877766666
Q ss_pred cc
Q 003650 674 TL 675 (805)
Q Consensus 674 ~l 675 (805)
..
T Consensus 244 ~g 245 (600)
T KOG0509|consen 244 NG 245 (600)
T ss_pred CC
Confidence 53
No 13
>PHA02741 hypothetical protein; Provisional
Probab=99.75 E-value=8.7e-18 Score=167.60 Aligned_cols=127 Identities=20% Similarity=0.148 Sum_probs=114.6
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHH------c-CCCCCccCCCCChHHHHHHHcCC----HHHHHHHHHCCCCCCcccC-
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVV------E-GSKTTEYDVHGQGVIHLCAMLGY----TWAILLFSWSGLSLDFRDK- 601 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll------~-Gadin~~D~~G~T~LH~Aa~~G~----~~~v~~LL~~Gadvn~~D~- 601 (805)
..+.|+||.|+..|+.. +++.|+ . |++++.+|..|+||||+|+..|+ .+++++|+..|+++|.+|.
T Consensus 19 ~~g~t~Lh~Aa~~g~~~--~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~ 96 (169)
T PHA02741 19 SEGENFFHEAARCGCFD--IIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML 96 (169)
T ss_pred cCCCCHHHHHHHcCCHH--HHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence 45789999999999987 566552 2 68899999999999999999999 5889999999999999986
Q ss_pred CCCchhhHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHccccc
Q 003650 602 YGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 668 (805)
Q Consensus 602 ~G~TpLh~Aa~~G~~~iV~~LL~-~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~ 668 (805)
.|+||||+|+..++.+++++|+. .|++++. +|..|.||||+|...++.+++++|++.++..
T Consensus 97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~------~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 97 EGDTALHLAAHRRDHDLAEWLCCQPGIDLHF------CNADNKSPFELAIDNEDVAMMQILREIVATS 158 (169)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCc------CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 89999999999999999999997 5999988 8899999999999999999999999988653
No 14
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.74 E-value=1.8e-17 Score=191.13 Aligned_cols=144 Identities=21% Similarity=0.273 Sum_probs=121.1
Q ss_pred HHHHHHHhCCCCCC----cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCC------ChHHHHHHHcCC--HHH
Q 003650 519 WAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHG------QGVIHLCAMLGY--TWA 585 (805)
Q Consensus 519 ~~~li~~l~~~~~~----~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G------~T~LH~Aa~~G~--~~~ 585 (805)
..++++.+.+.+.+ ...+.||||.|+..++.. ++++|++ |++++..+..| .||||+|+..|+ .++
T Consensus 155 ~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~--iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~i 232 (480)
T PHA03100 155 DLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNID--VIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEV 232 (480)
T ss_pred hHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHH--HHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHH
Confidence 45555555444333 235778999999999876 7888887 99999888888 899999999999 999
Q ss_pred HHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcc
Q 003650 586 ILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (805)
Q Consensus 586 v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~G 665 (805)
+++|++.|+++|.+|..|+||||+|+..|+.+++++|++.||+++. +|..|.|||++|+..++.+++++|+++|
T Consensus 233 v~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~------~d~~g~tpl~~A~~~~~~~iv~~Ll~~g 306 (480)
T PHA03100 233 VNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNL------VNKYGDTPLHIAILNNNKEIFKLLLNNG 306 (480)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc------cCCCCCcHHHHHHHhCCHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999998888 7889999999999999999999999999
Q ss_pred cccCc
Q 003650 666 LVAQF 670 (805)
Q Consensus 666 a~~~~ 670 (805)
++.+.
T Consensus 307 ~~i~~ 311 (480)
T PHA03100 307 PSIKT 311 (480)
T ss_pred CCHHH
Confidence 76543
No 15
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.73 E-value=3e-17 Score=189.76 Aligned_cols=131 Identities=20% Similarity=0.131 Sum_probs=120.1
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhc-
Q 003650 536 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY- 613 (805)
Q Consensus 536 ~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~- 613 (805)
+.||||.|+..++.. ++++|++ |+++|..|..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..
T Consensus 168 g~tpLh~A~~~~~~~--iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~ 245 (477)
T PHA02878 168 GNTALHYATENKDQR--LTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYC 245 (477)
T ss_pred CCCHHHHHHhCCCHH--HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhc
Confidence 889999999999987 7888888 999999999999999999999999999999999999999999999999999975
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHcccccCccccccc
Q 003650 614 GREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 676 (805)
Q Consensus 614 G~~~iV~~LL~~GAd~n~~td~~~~d~-~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l~ 676 (805)
++.+++++|+++|++++. ++. .|.||||+| .++.+++++|+++|++.+..+....
T Consensus 246 ~~~~iv~~Ll~~gadvn~------~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~ 301 (477)
T PHA02878 246 KDYDILKLLLEHGVDVNA------KSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKL 301 (477)
T ss_pred CCHHHHHHHHHcCCCCCc------cCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCC
Confidence 789999999999999998 554 799999999 5788999999999998877655433
No 16
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.73 E-value=9.9e-18 Score=164.22 Aligned_cols=129 Identities=18% Similarity=0.198 Sum_probs=109.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHcCC-----CCCccCCCCChHHHHHHHcCCH---HHHHHHHHCCCCCCcccC-CCC
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVEGS-----KTTEYDVHGQGVIHLCAMLGYT---WAILLFSWSGLSLDFRDK-YGW 604 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~Ga-----din~~D~~G~T~LH~Aa~~G~~---~~v~~LL~~Gadvn~~D~-~G~ 604 (805)
.++.||||+|+..|+..+ ++....... .++..|..|+||||+||..|+. +++++|+..|+++|.+|. .|+
T Consensus 15 ~~g~tpLh~A~~~g~~~~-l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~ 93 (154)
T PHA02736 15 IEGENILHYLCRNGGVTD-LLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGN 93 (154)
T ss_pred CCCCCHHHHHHHhCCHHH-HHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCC
Confidence 358899999999998543 221111111 2345788999999999999986 468899999999999984 899
Q ss_pred chhhHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccC
Q 003650 605 TALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQ 669 (805)
Q Consensus 605 TpLh~Aa~~G~~~iV~~LL~-~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~ 669 (805)
||||+|+..|+.+++++|+. .|++++. +|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 94 T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~------~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 94 TPLHIAVYTQNYELATWLCNQPGVNMEI------LNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCcc------ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999999999999999998 5999988 88999999999999999999999999998764
No 17
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.73 E-value=5.2e-17 Score=185.46 Aligned_cols=141 Identities=20% Similarity=0.132 Sum_probs=112.9
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHh
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~ 612 (805)
..+.||||.|+..++.. ++++|++ |+++|.+|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+.
T Consensus 122 ~~g~T~Lh~A~~~~~~~--~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~ 199 (434)
T PHA02874 122 AELKTFLHYAIKKGDLE--SIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAE 199 (434)
T ss_pred CCCccHHHHHHHCCCHH--HHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 45778888888888876 6777777 88888888888888888888888888888888888888888888888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCC-------------------------CCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHHccc
Q 003650 613 YGREKMVVDLLSAGAKPNLV-------------------------TDPTSQNPGGLNAADIASKKG-FDGLAAFLSEQAL 666 (805)
Q Consensus 613 ~G~~~iV~~LL~~GAd~n~~-------------------------td~~~~d~~G~TpL~lA~~~g-~~~iv~lLle~Ga 666 (805)
.|+.+++++|++.|++++.. .+++.+|..|.||||+|+..+ +.+++++|+++|+
T Consensus 200 ~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~ga 279 (434)
T PHA02874 200 YGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKA 279 (434)
T ss_pred cCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcC
Confidence 88888888888888776543 134557888899999998765 7889999999998
Q ss_pred ccCccccccc
Q 003650 667 VAQFNDMTLA 676 (805)
Q Consensus 667 ~~~~~~~~l~ 676 (805)
+.+..+....
T Consensus 280 d~n~~d~~g~ 289 (434)
T PHA02874 280 DISIKDNKGE 289 (434)
T ss_pred CCCCCCCCCC
Confidence 8776655443
No 18
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.73 E-value=3e-17 Score=189.67 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=106.0
Q ss_pred HHHHHHc-CCCCCccCCC-CChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCC
Q 003650 553 LLERVVE-GSKTTEYDVH-GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPN 630 (805)
Q Consensus 553 lv~~Ll~-Gadin~~D~~-G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n 630 (805)
++++|++ |+++|..|.. |.||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 149 iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in 228 (477)
T PHA02878 149 ITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD 228 (477)
T ss_pred HHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5566666 9999999988 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHc-CCHHHHHHHHHcccccCccc
Q 003650 631 LVTDPTSQNPGGLNAADIASKK-GFDGLAAFLSEQALVAQFND 672 (805)
Q Consensus 631 ~~td~~~~d~~G~TpL~lA~~~-g~~~iv~lLle~Ga~~~~~~ 672 (805)
. +|..|.||||+|+.. ++.+++++|+++|++.+..+
T Consensus 229 ~------~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~ 265 (477)
T PHA02878 229 A------RDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKS 265 (477)
T ss_pred C------CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccC
Confidence 8 889999999999975 78999999999999876543
No 19
>PHA03095 ankyrin-like protein; Provisional
Probab=99.72 E-value=6.9e-17 Score=185.70 Aligned_cols=131 Identities=18% Similarity=0.246 Sum_probs=117.8
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCH--HHHHHHHHCCCCCCcccCCCCchhhHH
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYT--WAILLFSWSGLSLDFRDKYGWTALHWA 610 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~--~~v~~LL~~Gadvn~~D~~G~TpLh~A 610 (805)
..+.|+||.++.......-+++.|++ |++++.+|..|.||||+||..|+. .++..|+..|+++|.+|..|+||||+|
T Consensus 185 ~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A 264 (471)
T PHA03095 185 DRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYA 264 (471)
T ss_pred CCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 45789999998764433337777877 999999999999999999999975 578899999999999999999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCc
Q 003650 611 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 670 (805)
Q Consensus 611 a~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~ 670 (805)
+..|+.+++++|++.||+++. +|..|.||||+|+..|+.+++++|++++++...
T Consensus 265 ~~~~~~~~v~~LL~~gad~n~------~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~ 318 (471)
T PHA03095 265 AVFNNPRACRRLIALGADINA------VSSDGNTPLSLMVRNNNGRAVRAALAKNPSAET 318 (471)
T ss_pred HHcCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHH
Confidence 999999999999999999998 889999999999999999999999999976543
No 20
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.72 E-value=2.2e-16 Score=193.75 Aligned_cols=129 Identities=19% Similarity=0.237 Sum_probs=87.9
Q ss_pred cchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhh-------
Q 003650 537 KDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALH------- 608 (805)
Q Consensus 537 ~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh------- 608 (805)
.++|+.||..|+.. +++.|++ |+++|..|..|+||||+||..|+.+++++|+++|+++|.+|.+|+||||
T Consensus 526 ~~~L~~Aa~~g~~~--~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~ 603 (823)
T PLN03192 526 ASNLLTVASTGNAA--LLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH 603 (823)
T ss_pred hhHHHHHHHcCCHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCC
Confidence 34555555555543 3444444 5555555555555555555555555555555555555555555555555
Q ss_pred ------------------------HHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003650 609 ------------------------WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (805)
Q Consensus 609 ------------------------~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~ 664 (805)
+|+..|+.+++++|+++|+++|. +|.+|.||||+|+..|+.+++++|+++
T Consensus 604 ~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~------~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 677 (823)
T PLN03192 604 HKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDS------EDHQGATALQVAMAEDHVDMVRLLIMN 677 (823)
T ss_pred HHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence 55666666677777888888887 899999999999999999999999999
Q ss_pred ccccCcccc
Q 003650 665 ALVAQFNDM 673 (805)
Q Consensus 665 Ga~~~~~~~ 673 (805)
|++.+..+.
T Consensus 678 GAdv~~~~~ 686 (823)
T PLN03192 678 GADVDKANT 686 (823)
T ss_pred CCCCCCCCC
Confidence 998876554
No 21
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.72 E-value=5.1e-17 Score=187.35 Aligned_cols=152 Identities=17% Similarity=0.170 Sum_probs=132.8
Q ss_pred cCCHHHHHHHhCCCCCC----cccccchHHHHHHcC--CcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHH
Q 003650 516 SNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKS--KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILL 588 (805)
Q Consensus 516 ~~~~~~li~~l~~~~~~----~~~~~t~L~~Aa~~~--~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~ 588 (805)
..+..++++.+.+.+.+ ...+.++||.|+..+ +.. ++++|++ |++++..|..|.||||+|+..|+.+++++
T Consensus 117 ~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~--iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~ 194 (480)
T PHA03100 117 KSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLK--ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKF 194 (480)
T ss_pred ccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHH--HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHH
Confidence 34455566665444433 346889999999999 655 7888888 99999999999999999999999999999
Q ss_pred HHHCCCCCCcccCCC------CchhhHHHhcCC--HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 003650 589 FSWSGLSLDFRDKYG------WTALHWAAYYGR--EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAF 660 (805)
Q Consensus 589 LL~~Gadvn~~D~~G------~TpLh~Aa~~G~--~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~l 660 (805)
|+++|++++..+..| .||||+|+..|+ .+++++|++.|++++. +|..|.||||+|+..|+.+++++
T Consensus 195 Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~------~d~~g~TpL~~A~~~~~~~iv~~ 268 (480)
T PHA03100 195 LLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINI------KDVYGFTPLHYAVYNNNPEFVKY 268 (480)
T ss_pred HHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCC------CCCCCCCHHHHHHHcCCHHHHHH
Confidence 999999999999999 999999999999 9999999999999998 88999999999999999999999
Q ss_pred HHHcccccCcccccc
Q 003650 661 LSEQALVAQFNDMTL 675 (805)
Q Consensus 661 Lle~Ga~~~~~~~~l 675 (805)
|+++|++.+..+...
T Consensus 269 Ll~~gad~n~~d~~g 283 (480)
T PHA03100 269 LLDLGANPNLVNKYG 283 (480)
T ss_pred HHHcCCCCCccCCCC
Confidence 999999877665443
No 22
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.72 E-value=2.1e-17 Score=179.50 Aligned_cols=138 Identities=20% Similarity=0.220 Sum_probs=117.4
Q ss_pred CCHHHHHHHhCCCCCC----cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHH
Q 003650 517 NSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW 591 (805)
Q Consensus 517 ~~~~~li~~l~~~~~~----~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~ 591 (805)
.+..++++.+...+.+ +....|||-.||..|+++ ++++|++ |+|++..|..|.|.||+||..|+.+++++|++
T Consensus 94 AGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~le--ivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle 171 (615)
T KOG0508|consen 94 AGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLE--IVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLE 171 (615)
T ss_pred cCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhH--HHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHH
Confidence 4556666666444333 333558999999999988 7888888 99999999999999999999999999999999
Q ss_pred CCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 003650 592 SGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 663 (805)
Q Consensus 592 ~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle 663 (805)
.|+|+|.++..|+|+||.|+..|+.+++++|+.+|+.++. |..|.|||..|+..|+.++|.+|+.
T Consensus 172 ~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-------d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 172 QGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-------DGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred hCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee-------cCCCCchHHHHhhhcchHHHHHHhc
Confidence 9999999999999999999999999999999999998774 6779999999999999999999986
No 23
>PHA02798 ankyrin-like protein; Provisional
Probab=99.72 E-value=6.4e-17 Score=187.58 Aligned_cols=157 Identities=15% Similarity=0.117 Sum_probs=111.8
Q ss_pred HHHHHHhCCCCCC----cccccchHHHHHHcCCc--HHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCC---HHHHHHH
Q 003650 520 AYLFKSVGDKRTS----LPEAKDSFFELTLKSKL--KEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY---TWAILLF 589 (805)
Q Consensus 520 ~~li~~l~~~~~~----~~~~~t~L~~Aa~~~~l--~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~---~~~v~~L 589 (805)
.++++.+.+.+.+ ...|.||||.|+..+.. .+ ++++|++ |++++..|..|.||||+|+..|+ .+++++|
T Consensus 89 ~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~-iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~L 167 (489)
T PHA02798 89 LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLE-ILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLL 167 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHH-HHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHH
Confidence 4455554444333 23567777777776531 22 5666666 77777777777777777777776 7777777
Q ss_pred HHCCCCCCccc-CCCCchhhHHHhc----CCHHHHHHHHHcCCCCCCCC-------------------------------
Q 003650 590 SWSGLSLDFRD-KYGWTALHWAAYY----GREKMVVDLLSAGAKPNLVT------------------------------- 633 (805)
Q Consensus 590 L~~Gadvn~~D-~~G~TpLh~Aa~~----G~~~iV~~LL~~GAd~n~~t------------------------------- 633 (805)
++.|+++|.++ ..|.||||.++.. ++.+++++|+++|++++...
T Consensus 168 l~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~ 247 (489)
T PHA02798 168 LEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS 247 (489)
T ss_pred HHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh
Confidence 77777777764 3577777777653 36777777777777665421
Q ss_pred --CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcccccccc
Q 003650 634 --DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG 677 (805)
Q Consensus 634 --d~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l~~ 677 (805)
|++.+|..|.||||+|+..|+.+++++|+++|++.+..+.....
T Consensus 248 ~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~T 293 (489)
T PHA02798 248 YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNT 293 (489)
T ss_pred cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCc
Confidence 45668889999999999999999999999999998876654433
No 24
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.71 E-value=7e-17 Score=184.42 Aligned_cols=149 Identities=14% Similarity=0.117 Sum_probs=126.8
Q ss_pred ccCCHHHHHHHhCCCCCC----cccccchHHHHHHcCCcHHHHHHHHHc------------------------CCCCCcc
Q 003650 515 ISNSWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLKEWLLERVVE------------------------GSKTTEY 566 (805)
Q Consensus 515 ~~~~~~~li~~l~~~~~~----~~~~~t~L~~Aa~~~~l~~~lv~~Ll~------------------------Gadin~~ 566 (805)
...+..++++.+.+.+.. ...+.+||+.|+..++.. ++++|++ |++++.+
T Consensus 43 ~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~--iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~ 120 (434)
T PHA02874 43 IRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHD--IIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIK 120 (434)
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH--HHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCC
Confidence 334555666665544433 234678999999998875 5555543 5567788
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHH
Q 003650 567 DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAA 646 (805)
Q Consensus 567 D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL 646 (805)
|..|.||||+|+..|+.+++++|++.|+++|.+|..|.||||+|+..|+.+++++|++.|++++. .|..|.|||
T Consensus 121 ~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~------~~~~g~tpL 194 (434)
T PHA02874 121 DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANV------KDNNGESPL 194 (434)
T ss_pred CCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCC------CCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988 789999999
Q ss_pred HHHHHcCCHHHHHHHHHcccccCcc
Q 003650 647 DIASKKGFDGLAAFLSEQALVAQFN 671 (805)
Q Consensus 647 ~lA~~~g~~~iv~lLle~Ga~~~~~ 671 (805)
|+|+..|+.+++++|++.|++....
T Consensus 195 ~~A~~~g~~~iv~~Ll~~g~~i~~~ 219 (434)
T PHA02874 195 HNAAEYGDYACIKLLIDHGNHIMNK 219 (434)
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcCC
Confidence 9999999999999999999876544
No 25
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.70 E-value=2.3e-16 Score=190.10 Aligned_cols=136 Identities=18% Similarity=0.098 Sum_probs=120.2
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHH
Q 003650 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (805)
Q Consensus 533 ~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa 611 (805)
...+.||||.|+..++..+ ++.+|++ |+++|.+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+
T Consensus 338 d~~g~TpLh~A~~~~~~~~-iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~ 416 (682)
T PHA02876 338 DRLYITPLHQASTLDRNKD-IVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFAL 416 (682)
T ss_pred ccCCCcHHHHHHHhCCcHH-HHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHH
Confidence 3457899999998776655 6666777 9999999999999999999999999999999999999999999999999998
Q ss_pred hcCC-HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHHcccccCcccccc
Q 003650 612 YYGR-EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG-FDGLAAFLSEQALVAQFNDMTL 675 (805)
Q Consensus 612 ~~G~-~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g-~~~iv~lLle~Ga~~~~~~~~l 675 (805)
..+. ..++++|++.|+++|. +|..|.||||+|+..| +.+++++|+++|++.+..+...
T Consensus 417 ~~~~~~~~vk~Ll~~gadin~------~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g 476 (682)
T PHA02876 417 CGTNPYMSVKTLIDRGANVNS------KNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQN 476 (682)
T ss_pred HcCCHHHHHHHHHhCCCCCCc------CCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCC
Confidence 7765 5678999999999998 8899999999999876 6899999999999887765543
No 26
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.70 E-value=1.4e-16 Score=189.62 Aligned_cols=136 Identities=14% Similarity=0.056 Sum_probs=118.2
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHH-----------------------------------
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLC----------------------------------- 577 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~A----------------------------------- 577 (805)
..+.||||.|+..|+...-++++|++ |+++|.+|..|+||||+|
T Consensus 210 ~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i 289 (764)
T PHA02716 210 NHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYI 289 (764)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHH
Confidence 45889999999999753227888888 999999999999999975
Q ss_pred --HHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHh--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHH--
Q 003650 578 --AMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY--YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK-- 651 (805)
Q Consensus 578 --a~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~--~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~-- 651 (805)
|..|+.+++++|++.|+++|.+|..|+||||+|+. .++.+++++|++.|++++. +|..|.||||+|+.
T Consensus 290 ~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~------kD~~G~TPLH~A~~~l 363 (764)
T PHA02716 290 TLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE------PDNIGNTVLHTYLSML 363 (764)
T ss_pred HHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc------CCCCCCCHHHHHHHhh
Confidence 34578899999999999999999999999999875 4689999999999999998 88999999999875
Q ss_pred ------------cCCHHHHHHHHHcccccCcccccc
Q 003650 652 ------------KGFDGLAAFLSEQALVAQFNDMTL 675 (805)
Q Consensus 652 ------------~g~~~iv~lLle~Ga~~~~~~~~l 675 (805)
.++.+++++|+++|++.+..+...
T Consensus 364 av~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G 399 (764)
T PHA02716 364 SVVNILDPETDNDIRLDVIQCLISLGADITAVNCLG 399 (764)
T ss_pred hhhccccccccccChHHHHHHHHHCCCCCCCcCCCC
Confidence 378999999999999887655443
No 27
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.70 E-value=4.3e-17 Score=177.10 Aligned_cols=130 Identities=15% Similarity=0.212 Sum_probs=121.9
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHh
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~ 612 (805)
.++-.||..|+..|+++ +++.|++ |+++|.......|||-.||.-|+.++|++|+++|+|++..|..|.|.||+||+
T Consensus 82 IegappLWaAsaAGHl~--vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~y 159 (615)
T KOG0508|consen 82 IEGAPPLWAASAAGHLE--VVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACY 159 (615)
T ss_pred cCCCchhhHHhccCcHH--HHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeec
Confidence 35667888899999998 8898888 99999988888999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcc
Q 003650 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 671 (805)
Q Consensus 613 ~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~ 671 (805)
.||.+|+++|++.|||+|. ++..|.|+||.|+..|+.+++++|+.+|+.....
T Consensus 160 kGh~~I~qyLle~gADvn~------ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d 212 (615)
T KOG0508|consen 160 KGHVDIAQYLLEQGADVNA------KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVD 212 (615)
T ss_pred cCchHHHHHHHHhCCCcch------hcccCchHHHhhhhcccHHHHHHHHhCCceeeec
Confidence 9999999999999999999 8899999999999999999999999999765543
No 28
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.69 E-value=2.3e-16 Score=162.84 Aligned_cols=129 Identities=12% Similarity=0.132 Sum_probs=112.4
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCChHHHHHHHcC--CHHHHHHHHHCCCCCCcccC-CCCchhhHHHh
Q 003650 536 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLG--YTWAILLFSWSGLSLDFRDK-YGWTALHWAAY 612 (805)
Q Consensus 536 ~~t~L~~Aa~~~~l~~~lv~~Ll~Gadin~~D~~G~T~LH~Aa~~G--~~~~v~~LL~~Gadvn~~D~-~G~TpLh~Aa~ 612 (805)
..+||+.|+..++.. +++.|+.. +|..|..|.||||+|+..+ +.+++++|+++|+++|.++. .|+||||+|+.
T Consensus 21 ~~~pL~~A~~~~~~~--~vk~Li~~--~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~ 96 (209)
T PHA02859 21 YCNPLFYYVEKDDIE--GVKKWIKF--VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS 96 (209)
T ss_pred cCcHHHHHHHhCcHH--HHHHHHHh--hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence 568999999999988 67777753 5678899999999999865 89999999999999999974 89999999886
Q ss_pred c---CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHcccccCccccc
Q 003650 613 Y---GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK--KGFDGLAAFLSEQALVAQFNDMT 674 (805)
Q Consensus 613 ~---G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~--~g~~~iv~lLle~Ga~~~~~~~~ 674 (805)
. ++.+++++|+++|++++. +|..|.||||+|+. .++.+++++|+++|++.+..+..
T Consensus 97 ~~~~~~~eiv~~Ll~~gadin~------~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~ 157 (209)
T PHA02859 97 FNKNVEPEILKILIDSGSSITE------EDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFD 157 (209)
T ss_pred hCccccHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCC
Confidence 4 479999999999999998 88999999999876 46899999999999887665543
No 29
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.68 E-value=1.3e-16 Score=193.32 Aligned_cols=251 Identities=17% Similarity=0.216 Sum_probs=180.1
Q ss_pred CCcEEEEcCCeecceeeccccceeeeCCCCCCCeeEEEEEeCCCCccccccccccCCCCcccCCCCccccchhhHHHHHH
Q 003650 398 KSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPISQVLNFEYRSPQLHAPVASSEDKSKWEEFQVQM 477 (805)
Q Consensus 398 ~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph~~G~V~l~v~~~n~~~~se~~~Feyr~~~~~~~~~~~~~~~~~~el~l~~ 477 (805)
.....|.-|.+++.--+...|..-|..+ .+|..||+++..-..+ .++..-+... . .....+..+.+++|+..
T Consensus 377 pl~la~~~g~~~~v~Lll~~ga~~~~~g--k~gvTplh~aa~~~~~--~~v~l~l~~g--A--~~~~~~~lG~T~lhvaa 448 (1143)
T KOG4177|consen 377 PLHLAVKSGRVSVVELLLEAGADPNSAG--KNGVTPLHVAAHYGNP--RVVKLLLKRG--A--SPNAKAKLGYTPLHVAA 448 (1143)
T ss_pred chhhhcccCchhHHHhhhhccCCcccCC--CCCcceeeehhhccCc--ceEEEEeccC--C--ChhhHhhcCCChhhhhh
Confidence 3457788888888877888887633222 7899999998743321 1222222210 0 01112233457777665
Q ss_pred HHHHHHhccccccccccCCCCCCchHHHhhhhhhhhcccCCHHHHHHHhCCC----CCCcccccchHHHHHHcCCcHHHH
Q 003650 478 RLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDK----RTSLPEAKDSFFELTLKSKLKEWL 553 (805)
Q Consensus 478 Rl~~ll~~~~~~lqil~~k~~~~~l~d~~~~a~~i~~~~~~~~~li~~l~~~----~~~~~~~~t~L~~Aa~~~~l~~~l 553 (805)
...+++... ..++..+.+++..... .+...-.+...+|.++...+.+. .++.+.+-+++|.+...+... .
T Consensus 449 ~~g~~~~~~---~~l~~~g~~~n~~s~~-G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~--~ 522 (1143)
T KOG4177|consen 449 KKGRYLQIA---RLLLQYGADPNAVSKQ-GFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVK--V 522 (1143)
T ss_pred hcccHhhhh---hhHhhcCCCcchhccc-cCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHH--H
Confidence 544211111 1122334555533221 12222223346667776666543 344566779999999999876 4
Q ss_pred HHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCC
Q 003650 554 LERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLV 632 (805)
Q Consensus 554 v~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~ 632 (805)
...+.+ |++++.++.+|.||||.||..|+..+|++||++|+|++.+|+.|+||||.||..|+.+|+.+|+++||++|.
T Consensus 523 ~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna- 601 (1143)
T KOG4177|consen 523 AKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA- 601 (1143)
T ss_pred HHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc-
Confidence 555555 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHccccc
Q 003650 633 TDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 668 (805)
Q Consensus 633 td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~ 668 (805)
.|.+|.|||++|+..|+.+++++|+..++++
T Consensus 602 -----~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~ 632 (1143)
T KOG4177|consen 602 -----ADLDGFTPLHIAVRLGYLSVVKLLKVVTATP 632 (1143)
T ss_pred -----ccccCcchhHHHHHhcccchhhHHHhccCcc
Confidence 8899999999999999999999999999885
No 30
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.68 E-value=2.1e-16 Score=188.12 Aligned_cols=152 Identities=14% Similarity=0.024 Sum_probs=124.0
Q ss_pred CCHHHHHHHhCCCC-CC-----cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCC--HHHHH
Q 003650 517 NSWAYLFKSVGDKR-TS-----LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAIL 587 (805)
Q Consensus 517 ~~~~~li~~l~~~~-~~-----~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~--~~~v~ 587 (805)
+.-.++++.+.+.+ .+ ...+.||||.|+........++++|++ |+++|..|..|.||||+|+..|+ .++|+
T Consensus 152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVk 231 (764)
T PHA02716 152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIK 231 (764)
T ss_pred CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHH
Confidence 34456666665554 22 235789999876543322228888888 99999999999999999999995 58999
Q ss_pred HHHHCCCCCCcccCCCCchhhHH-------------------------------------HhcCCHHHHHHHHHcCCCCC
Q 003650 588 LFSWSGLSLDFRDKYGWTALHWA-------------------------------------AYYGREKMVVDLLSAGAKPN 630 (805)
Q Consensus 588 ~LL~~Gadvn~~D~~G~TpLh~A-------------------------------------a~~G~~~iV~~LL~~GAd~n 630 (805)
+|+++||++|.+|..|+||||+| +..|+.+++++|++.|++++
T Consensus 232 lLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN 311 (764)
T PHA02716 232 KIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLH 311 (764)
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee
Confidence 99999999999999999999975 44578899999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHcccccCccccc
Q 003650 631 LVTDPTSQNPGGLNAADIASK--KGFDGLAAFLSEQALVAQFNDMT 674 (805)
Q Consensus 631 ~~td~~~~d~~G~TpL~lA~~--~g~~~iv~lLle~Ga~~~~~~~~ 674 (805)
. +|..|.||||+|+. .++.+++++|+++|++.+..+..
T Consensus 312 ~------kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~ 351 (764)
T PHA02716 312 Y------KDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNI 351 (764)
T ss_pred c------cCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCC
Confidence 8 88999999999864 46889999999999987765543
No 31
>PHA03095 ankyrin-like protein; Provisional
Probab=99.68 E-value=4.1e-16 Score=179.30 Aligned_cols=125 Identities=21% Similarity=0.183 Sum_probs=63.3
Q ss_pred ccchHHHHHHcC---CcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcC-CHHHHHHHHHCCCCCCcccCCCCchhhHH
Q 003650 536 AKDSFFELTLKS---KLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG-YTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (805)
Q Consensus 536 ~~t~L~~Aa~~~---~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G-~~~~v~~LL~~Gadvn~~D~~G~TpLh~A 610 (805)
+.||||.|+..+ +.. +++.|++ |+++|.+|..|.||||+|+..| ..+++++|+++|+++|.+|..|+||||+|
T Consensus 47 g~t~Lh~a~~~~~~~~~~--iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a 124 (471)
T PHA03095 47 GKTPLHLYLHYSSEKVKD--IVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVY 124 (471)
T ss_pred CCCHHHHHHHhcCCChHH--HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 445555555544 222 4444444 5555555555555555555555 35555555555555555555555555555
Q ss_pred H--hcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHccccc
Q 003650 611 A--YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQALVA 668 (805)
Q Consensus 611 a--~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g--~~~iv~lLle~Ga~~ 668 (805)
+ ..++.+++++|+++|++++. .|..|.||||+|+..+ ..+++++|+++|++.
T Consensus 125 ~~~~~~~~~iv~~Ll~~gad~~~------~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~ 180 (471)
T PHA03095 125 LSGFNINPKVIRLLLRKGADVNA------LDLYGMTPLAVLLKSRNANVELLRLLIDAGADV 180 (471)
T ss_pred hhCCcCCHHHHHHHHHcCCCCCc------cCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCC
Confidence 5 33445555555555555554 4455555555544433 344555555555443
No 32
>PHA02946 ankyin-like protein; Provisional
Probab=99.68 E-value=3.7e-16 Score=178.98 Aligned_cols=128 Identities=15% Similarity=0.144 Sum_probs=61.8
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCCc-cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhc
Q 003650 536 AKDSFFELTLKSKLKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (805)
Q Consensus 536 ~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~-~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~ 613 (805)
+.||||.|+..++...-++++|++ |+++|. .|..|.|||| ||..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 105 g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~ 183 (446)
T PHA02946 105 HKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMS 183 (446)
T ss_pred CCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHh
Confidence 444555444433211113344444 444443 3444555554 3334445555555555555555555555555555443
Q ss_pred CC--HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcccccCcc
Q 003650 614 GR--EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQALVAQFN 671 (805)
Q Consensus 614 G~--~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g--~~~iv~lLle~Ga~~~~~ 671 (805)
++ .+++++|++.|++++. +|..|.||||+|+..| +.+++++|++ |++.+..
T Consensus 184 ~~~~~~~v~~Ll~~Gadin~------~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~ 238 (446)
T PHA02946 184 DNPKASTISWMMKLGISPSK------PDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQ 238 (446)
T ss_pred cCCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCC
Confidence 32 3455555555555554 5555666666666553 4555555553 4444433
No 33
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.68 E-value=4.8e-16 Score=180.57 Aligned_cols=137 Identities=14% Similarity=0.092 Sum_probs=81.6
Q ss_pred cccchHHHHHHcC---CcHHHHHHHHHc-CCCC-CccCCCCChHHHHHHHc--CCHHHHHHHHHCCCCCCc-ccCCCCch
Q 003650 535 EAKDSFFELTLKS---KLKEWLLERVVE-GSKT-TEYDVHGQGVIHLCAML--GYTWAILLFSWSGLSLDF-RDKYGWTA 606 (805)
Q Consensus 535 ~~~t~L~~Aa~~~---~l~~~lv~~Ll~-Gadi-n~~D~~G~T~LH~Aa~~--G~~~~v~~LL~~Gadvn~-~D~~G~Tp 606 (805)
.+.||||.|+..+ +.+ ++++|++ |+++ +..|..|.||||+|+.. ++.++|++|+++|++++. .+..|.||
T Consensus 107 ~g~tpL~~a~~~~~~~~~e--iv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tp 184 (494)
T PHA02989 107 NGVSPIVCFIYNSNINNCD--MLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTP 184 (494)
T ss_pred CCCcHHHHHHHhcccCcHH--HHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCCh
Confidence 4556666555432 222 5555555 6666 55666666666665543 456666666666666665 45566666
Q ss_pred hhHHHhcC----CHHHHHHHHHcCCCCCCCC--------------------------------CCCCCCCCCCcHHHHHH
Q 003650 607 LHWAAYYG----REKMVVDLLSAGAKPNLVT--------------------------------DPTSQNPGGLNAADIAS 650 (805)
Q Consensus 607 Lh~Aa~~G----~~~iV~~LL~~GAd~n~~t--------------------------------d~~~~d~~G~TpL~lA~ 650 (805)
||+|+..+ +.+++++|++.|++++..+ |++.+|..|.||||+|+
T Consensus 185 L~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa 264 (494)
T PHA02989 185 MNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISA 264 (494)
T ss_pred HHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHH
Confidence 66665443 5666666666666655432 23445666777777777
Q ss_pred HcCCHHHHHHHHHcccccCcccc
Q 003650 651 KKGFDGLAAFLSEQALVAQFNDM 673 (805)
Q Consensus 651 ~~g~~~iv~lLle~Ga~~~~~~~ 673 (805)
..|+.+++++|+++|++.+..+.
T Consensus 265 ~~~~~~~v~~LL~~Gadin~~d~ 287 (494)
T PHA02989 265 KVDNYEAFNYLLKLGDDIYNVSK 287 (494)
T ss_pred HhcCHHHHHHHHHcCCCccccCC
Confidence 77777777777777766655443
No 34
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.68 E-value=3.5e-16 Score=168.96 Aligned_cols=121 Identities=16% Similarity=0.099 Sum_probs=105.2
Q ss_pred cccchHHHHHHc-CCcHHHHHHHHHc-CCCCCcc----CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccc-CCCCchh
Q 003650 535 EAKDSFFELTLK-SKLKEWLLERVVE-GSKTTEY----DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD-KYGWTAL 607 (805)
Q Consensus 535 ~~~t~L~~Aa~~-~~l~~~lv~~Ll~-Gadin~~----D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D-~~G~TpL 607 (805)
.+.++++++|.. ++.+ ++++|++ |+++|.+ |..|.||||+|+..|+.+++++|+++||++|.++ ..|.|||
T Consensus 31 ~~~~~lL~~A~~~~~~e--ivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpL 108 (300)
T PHA02884 31 ICIANILYSSIKFHYTD--IIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPL 108 (300)
T ss_pred CCCCHHHHHHHHcCCHH--HHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHH
Confidence 355555555554 5555 7888888 9999987 4589999999999999999999999999999864 5799999
Q ss_pred hHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 003650 608 HWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 663 (805)
Q Consensus 608 h~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle 663 (805)
|+|+..|+.+++++|+.+||+++. +|..|.||||+|+..++.+++.++..
T Consensus 109 h~Aa~~~~~eivklLL~~GAdin~------kd~~G~TpL~~A~~~~~~~~~~~~~~ 158 (300)
T PHA02884 109 YISVLHGCLKCLEILLSYGADINI------QTNDMVTPIELALMICNNFLAFMICD 158 (300)
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHhCChhHHHHhcC
Confidence 999999999999999999999998 88999999999999998888766653
No 35
>PHA02795 ankyrin-like protein; Provisional
Probab=99.68 E-value=3.3e-16 Score=175.70 Aligned_cols=146 Identities=18% Similarity=0.113 Sum_probs=125.0
Q ss_pred CCHHHHHHHhCCCCCCc--ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCc-c-----CCCCChHHHHHHHcCCHHHHH
Q 003650 517 NSWAYLFKSVGDKRTSL--PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTE-Y-----DVHGQGVIHLCAMLGYTWAIL 587 (805)
Q Consensus 517 ~~~~~li~~l~~~~~~~--~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~-~-----D~~G~T~LH~Aa~~G~~~~v~ 587 (805)
.+..++++.+.+.|.+. .++.|++|.|+..++.+ ++++|+. |++.+. . +..|.|++|.|+..++.++++
T Consensus 128 ~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~~~~e--IVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve 205 (437)
T PHA02795 128 YVEIDIVDFMVDHGAVIYKIECLNAYFRGICKKESS--VVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYK 205 (437)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHcCcHH--HHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHH
Confidence 46667777776666553 34578999999998876 8899988 874332 2 235889999999999999999
Q ss_pred HHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcC--------CHHHHH
Q 003650 588 LFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--------FDGLAA 659 (805)
Q Consensus 588 ~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g--------~~~iv~ 659 (805)
+|+.+|+++|.+|..|+||||+|+..|+.+++++|+++||+++. +|..|.||||+|+..| +.++++
T Consensus 206 ~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~------~d~~G~TpLh~Aa~~g~~~~~~~~~~eIve 279 (437)
T PHA02795 206 LCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNA------VMSNGYTCLDVAVDRGSVIARRETHLKILE 279 (437)
T ss_pred HHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHcCCcccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999 8899999999999988 479999
Q ss_pred HHHHcccccCc
Q 003650 660 FLSEQALVAQF 670 (805)
Q Consensus 660 lLle~Ga~~~~ 670 (805)
+|+++|++.+.
T Consensus 280 lLL~~gadI~~ 290 (437)
T PHA02795 280 ILLREPLSIDC 290 (437)
T ss_pred HHHhCCCCCCc
Confidence 99999976544
No 36
>PHA02946 ankyin-like protein; Provisional
Probab=99.67 E-value=7.6e-16 Score=176.46 Aligned_cols=134 Identities=11% Similarity=0.068 Sum_probs=114.2
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCC--HHHHHHHHHCCCCCCc-ccCCCCchhh
Q 003650 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY--TWAILLFSWSGLSLDF-RDKYGWTALH 608 (805)
Q Consensus 533 ~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~--~~~v~~LL~~Gadvn~-~D~~G~TpLh 608 (805)
..++.||||.|+..++.. ++++|++ |+++|.+|..|+||||+|+..+. .+++++|+.+|+++|. .|..|.||||
T Consensus 69 d~~G~TpLh~Aa~~g~~e--iv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~ 146 (446)
T PHA02946 69 DDDGNYPLHIASKINNNR--IVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL 146 (446)
T ss_pred CCCCCCHHHHHHHcCCHH--HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH
Confidence 446889999999999876 7888888 99999999999999999988764 7889999999999995 6888999997
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcccccCcccccc
Q 003650 609 WAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG--FDGLAAFLSEQALVAQFNDMTL 675 (805)
Q Consensus 609 ~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g--~~~iv~lLle~Ga~~~~~~~~l 675 (805)
||..|+.+++++|++.|++++. +|..|.||||+|+..+ +.+++++|+++|++.+..+...
T Consensus 147 -aa~~~~~~vv~~Ll~~gad~~~------~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G 208 (446)
T PHA02946 147 -ACTDPSERVFKKIMSIGFEARI------VDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDG 208 (446)
T ss_pred -HHHCCChHHHHHHHhccccccc------cCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCC
Confidence 6677899999999999999988 8899999999987754 4689999999998877655433
No 37
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.66 E-value=8.4e-16 Score=185.31 Aligned_cols=129 Identities=19% Similarity=0.195 Sum_probs=80.2
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcC-CHHHHHHHHHCCCCCCcccCCCCchhhHHHh
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG-YTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G-~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~ 612 (805)
.+.||||.|+..++..+ ++++|++ |++++..|..|.||||+|+..| ..++++.|+..|+++|..|..|+||||+|+.
T Consensus 272 ~g~TpLh~Aa~~~~~~~-iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~ 350 (682)
T PHA02876 272 CKNTPLHHASQAPSLSR-LVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQAST 350 (682)
T ss_pred CCCCHHHHHHhCCCHHH-HHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHH
Confidence 35566666666666544 4555555 6666666666666666666666 3566666666666666666666666666665
Q ss_pred c-CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCc
Q 003650 613 Y-GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 670 (805)
Q Consensus 613 ~-G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~ 670 (805)
. ++.+++.+|++.|++++. +|..|.||||+|+..|+.+++++|+++|++.+.
T Consensus 351 ~~~~~~iv~lLl~~gadin~------~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~ 403 (682)
T PHA02876 351 LDRNKDIVITLLELGANVNA------RDYCDKTPIHYAAVRNNVVIINTLLDYGADIEA 403 (682)
T ss_pred hCCcHHHHHHHHHcCCCCcc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccc
Confidence 4 345666666666666665 556666666666666666666666666655443
No 38
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.65 E-value=9.8e-16 Score=177.95 Aligned_cols=151 Identities=13% Similarity=0.149 Sum_probs=124.0
Q ss_pred CCHHHHHHHhCCCCCCcc---cccchHHHHHHcCCc-----HHHHHHHHHc-CCCCCccCCCCChHHHHHHHc---CCHH
Q 003650 517 NSWAYLFKSVGDKRTSLP---EAKDSFFELTLKSKL-----KEWLLERVVE-GSKTTEYDVHGQGVIHLCAML---GYTW 584 (805)
Q Consensus 517 ~~~~~li~~l~~~~~~~~---~~~t~L~~Aa~~~~l-----~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~---G~~~ 584 (805)
+...++++.|.+.+.+.+ .+.||||.|+..+.. .+ ++++|++ |+++|.+|..|.||||.|+.. |+.+
T Consensus 47 ~~~~~iv~~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~-iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~e 125 (494)
T PHA02989 47 DVKIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKK-IVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCD 125 (494)
T ss_pred CCChHHHHHHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHH-HHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHH
Confidence 345667777766555432 357999988765532 23 7888888 999999999999999988765 6799
Q ss_pred HHHHHHHCCCCC-CcccCCCCchhhHHHhc--CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcC----CHHH
Q 003650 585 AILLFSWSGLSL-DFRDKYGWTALHWAAYY--GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG----FDGL 657 (805)
Q Consensus 585 ~v~~LL~~Gadv-n~~D~~G~TpLh~Aa~~--G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g----~~~i 657 (805)
++++|+++|+++ +.+|..|+||||+|+.. ++.++|++|+++|++++.. .+..|.||||+|+..+ +.++
T Consensus 126 iv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~-----~~~~g~tpL~~a~~~~~~~~~~~i 200 (494)
T PHA02989 126 MLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEK-----TSLYGLTPMNIYLRNDIDVISIKV 200 (494)
T ss_pred HHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc-----ccccCCChHHHHHhcccccccHHH
Confidence 999999999999 89999999999998764 6899999999999999872 3678999999998764 8999
Q ss_pred HHHHHHcccccCcccc
Q 003650 658 AAFLSEQALVAQFNDM 673 (805)
Q Consensus 658 v~lLle~Ga~~~~~~~ 673 (805)
+++|+++|++.+..+.
T Consensus 201 v~~Ll~~Ga~vn~~~~ 216 (494)
T PHA02989 201 IKYLIKKGVNIETNNN 216 (494)
T ss_pred HHHHHhCCCCccccCC
Confidence 9999999998776553
No 39
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.65 E-value=4e-16 Score=179.04 Aligned_cols=135 Identities=19% Similarity=0.188 Sum_probs=121.2
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHH-CC-CCCCcccCCCCchhhHH
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSW-SG-LSLDFRDKYGWTALHWA 610 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~-~G-advn~~D~~G~TpLh~A 610 (805)
.++.||||+||..|+.. .++.|+. |++++.+++++.||||.||..|+..+|+.||+ .| ..+|..|-.|.||||+|
T Consensus 271 ~dg~tpLH~a~r~G~~~--svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHla 348 (929)
T KOG0510|consen 271 NDGCTPLHYAARQGGPE--SVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLA 348 (929)
T ss_pred ccCCchHHHHHHcCChh--HHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhh
Confidence 45789999999999988 6888888 99999999999999999999999999999997 55 56888999999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcccc
Q 003650 611 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDM 673 (805)
Q Consensus 611 a~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~ 673 (805)
+..||.+++++||..||...... ..|.+|.||||+|+..|+..++++|+.+|++....+.
T Consensus 349 a~~gH~~v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~ 408 (929)
T KOG0510|consen 349 AKSGHDRVVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNK 408 (929)
T ss_pred hhcCHHHHHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccc
Confidence 99999999999999999987311 1589999999999999999999999999998755443
No 40
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.65 E-value=5e-16 Score=149.75 Aligned_cols=124 Identities=21% Similarity=0.217 Sum_probs=104.4
Q ss_pred chHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCH
Q 003650 538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 616 (805)
Q Consensus 538 t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~ 616 (805)
.-++.|+.++.+.+ +..+|.+ ...+|.+|.+|.||||.|+..||.++|+.|+..||+++++...||||||-||..++.
T Consensus 65 rl~lwaae~nrl~e-V~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~ 143 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTE-VQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNF 143 (228)
T ss_pred HHHHHHHhhccHHH-HHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccch
Confidence 45678888888885 4444444 556899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHH-ccccc
Q 003650 617 KMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGF-DGLAAFLSE-QALVA 668 (805)
Q Consensus 617 ~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~-~~iv~lLle-~Ga~~ 668 (805)
+++.+||++|||+|+ ......||||+|+...+ ...+.+|+. .+..+
T Consensus 144 ~va~~LLqhgaDVnA------~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~p 191 (228)
T KOG0512|consen 144 EVAGRLLQHGADVNA------QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHP 191 (228)
T ss_pred hHHHHHHhccCcccc------cccccchhhHHhhcccchHHHHHHHhhccccCh
Confidence 999999999999999 44678999999997654 455666654 34433
No 41
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.64 E-value=2.8e-16 Score=156.56 Aligned_cols=130 Identities=18% Similarity=0.218 Sum_probs=120.0
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHh
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~ 612 (805)
..|.|||++|+.+|++. ++++|++ |++++...+...|+|.+|+..|+.++|++||.+++|||.-|-+|-|||-+|+.
T Consensus 158 e~GfTpLiWAaa~G~i~--vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvr 235 (296)
T KOG0502|consen 158 EFGFTPLIWAAAKGHIP--VVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVR 235 (296)
T ss_pred ccCchHhHHHHhcCchH--HHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeec
Confidence 34789999999999998 7999998 99999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCccc
Q 003650 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 672 (805)
Q Consensus 613 ~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~ 672 (805)
.||.+||+.||..||+++. .+..|.+++++|+..|+. +|+..+++-+...+.+
T Consensus 236 gnhvkcve~Ll~sGAd~t~------e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~ 288 (296)
T KOG0502|consen 236 GNHVKCVESLLNSGADVTQ------EDDSGYWIMDLAVALGYR-IVQQVIEKHALKLCQD 288 (296)
T ss_pred CChHHHHHHHHhcCCCccc------ccccCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhc
Confidence 9999999999999999998 788999999999999998 8888888776554443
No 42
>PHA02798 ankyrin-like protein; Provisional
Probab=99.64 E-value=1.2e-15 Score=176.86 Aligned_cols=150 Identities=13% Similarity=0.145 Sum_probs=122.4
Q ss_pred CCHHHHHHHhCCCCCC----cccccchHHHHHHc-----CCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcC---CH
Q 003650 517 NSWAYLFKSVGDKRTS----LPEAKDSFFELTLK-----SKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG---YT 583 (805)
Q Consensus 517 ~~~~~li~~l~~~~~~----~~~~~t~L~~Aa~~-----~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G---~~ 583 (805)
+...++++.+.+.+.+ ...+.||||.++.. +... ++++|++ |+++|.+|..|+||||+|+..| +.
T Consensus 48 ~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~--iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~ 125 (489)
T PHA02798 48 SPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLD--IVKILIENGADINKKNSDGETPLYCLLSNGYINNL 125 (489)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHH--HHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChH
Confidence 4455666666555444 34688999988753 2223 7888888 9999999999999999999876 67
Q ss_pred HHHHHHHHCCCCCCcccCCCCchhhHHHhcCC---HHHHHHHHHcCCCCCCCCCCCCC-CCCCCcHHHHHHHcCC----H
Q 003650 584 WAILLFSWSGLSLDFRDKYGWTALHWAAYYGR---EKMVVDLLSAGAKPNLVTDPTSQ-NPGGLNAADIASKKGF----D 655 (805)
Q Consensus 584 ~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~---~~iV~~LL~~GAd~n~~td~~~~-d~~G~TpL~lA~~~g~----~ 655 (805)
+++++|+++|+++|.+|..|+||||+|+..|+ .+++++|++.|++++. + +..|.||||.+...+. .
T Consensus 126 ~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~------~~~~~~~t~Lh~~~~~~~~~~~~ 199 (489)
T PHA02798 126 EILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINT------HNNKEKYDTLHCYFKYNIDRIDA 199 (489)
T ss_pred HHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccc------ccCcCCCcHHHHHHHhccccCCH
Confidence 99999999999999999999999999999998 8999999999999987 4 3578999999887654 6
Q ss_pred HHHHHHHHcccccCccccc
Q 003650 656 GLAAFLSEQALVAQFNDMT 674 (805)
Q Consensus 656 ~iv~lLle~Ga~~~~~~~~ 674 (805)
+++++|+++|++.+..+..
T Consensus 200 ~ivk~Li~~Ga~i~~~~~~ 218 (489)
T PHA02798 200 DILKLFVDNGFIINKENKS 218 (489)
T ss_pred HHHHHHHHCCCCcccCCcc
Confidence 8999999999887665443
No 43
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.62 E-value=4.7e-16 Score=154.92 Aligned_cols=128 Identities=18% Similarity=0.073 Sum_probs=115.0
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCC
Q 003650 536 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR 615 (805)
Q Consensus 536 ~~t~L~~Aa~~~~l~~~lv~~Ll~Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~ 615 (805)
+.+++..+..+.++.. + .++....+|..|+.|.|||.||++.|++.+|++||..||+++..-+...|+|.+|+..|.
T Consensus 129 p~s~~slsVhql~L~~--~-~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggy 205 (296)
T KOG0502|consen 129 PWSPLSLSVHQLHLDV--V-DLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGY 205 (296)
T ss_pred cCChhhHHHHHHHHHH--H-HHHhhccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCCh
Confidence 4577888888776652 1 222367899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCccc
Q 003650 616 EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFND 672 (805)
Q Consensus 616 ~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~ 672 (805)
.++|++||.++.|+|. .|.+|.|||-+|++.||.+|++.|++.|++....+
T Consensus 206 tdiV~lLL~r~vdVNv------yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~ 256 (296)
T KOG0502|consen 206 TDIVELLLTREVDVNV------YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQED 256 (296)
T ss_pred HHHHHHHHhcCCCcce------eccCCCceeeeeecCChHHHHHHHHhcCCCccccc
Confidence 9999999999999999 89999999999999999999999999998876543
No 44
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.61 E-value=9e-16 Score=162.58 Aligned_cols=131 Identities=19% Similarity=0.238 Sum_probs=98.7
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc--CCCCCccCCCCChHHHHHHHc-----CCHHHHHHHHHCCCCCCcccC-CCCch
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVE--GSKTTEYDVHGQGVIHLCAML-----GYTWAILLFSWSGLSLDFRDK-YGWTA 606 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~--Gadin~~D~~G~T~LH~Aa~~-----G~~~~v~~LL~~Gadvn~~D~-~G~Tp 606 (805)
+|.|.||+++...++. ++..|++ -+++|..+.-|.||+++||.. .+..+|..|...| |||++-. .|.|+
T Consensus 267 NGNTALHYsVSHaNF~--VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQTA 343 (452)
T KOG0514|consen 267 NGNTALHYAVSHANFD--VVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQTA 343 (452)
T ss_pred CCCeeeeeeecccchH--HHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcchh
Confidence 4678888888888887 6777776 568888888888888887754 2456777777665 6777654 48888
Q ss_pred hhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc-ccccCccccc
Q 003650 607 LHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ-ALVAQFNDMT 674 (805)
Q Consensus 607 Lh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~-Ga~~~~~~~~ 674 (805)
|++|+.+|+.++|+.||.+|||+|+ +|.+|.|+|++|+.+||++|+++||.. +++..+.+..
T Consensus 344 LMLAVSHGr~d~vk~LLacgAdVNi------QDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~D 406 (452)
T KOG0514|consen 344 LMLAVSHGRVDMVKALLACGADVNI------QDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVD 406 (452)
T ss_pred hhhhhhcCcHHHHHHHHHccCCCcc------ccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCC
Confidence 8888888888888888888888888 788888888888888888888888765 3444444443
No 45
>PHA02917 ankyrin-like protein; Provisional
Probab=99.61 E-value=7e-15 Score=175.38 Aligned_cols=124 Identities=22% Similarity=0.184 Sum_probs=105.5
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHH--HcCCHHHHHHHHHCCCCCCcccC---CC------
Q 003650 536 AKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCA--MLGYTWAILLFSWSGLSLDFRDK---YG------ 603 (805)
Q Consensus 536 ~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa--~~G~~~~v~~LL~~Gadvn~~D~---~G------ 603 (805)
...+++.|+..++.+ ++++|++ |+++|.+|..|+||||+|+ ..|+.+++++|+++|+++|..|. .|
T Consensus 103 ~~~~~~~a~~~~~~e--~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~ 180 (661)
T PHA02917 103 FNIFSYMKSKNVDVD--LIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDY 180 (661)
T ss_pred cchHHHHHhhcCCHH--HHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccc
Confidence 334555666666766 8898888 9999999999999999654 47899999999999999987654 34
Q ss_pred -----CchhhHHHh-----------cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHHHcc
Q 003650 604 -----WTALHWAAY-----------YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFD--GLAAFLSEQA 665 (805)
Q Consensus 604 -----~TpLh~Aa~-----------~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~--~iv~lLle~G 665 (805)
.||||+|+. .|+.++|++|+++||++|. +|.+|.||||+|+..|+. +++++|++ |
T Consensus 181 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~------~d~~G~TpLh~A~~~g~~~~eivk~Li~-g 253 (661)
T PHA02917 181 QPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS------IDKNYCTALQYYIKSSHIDIDIVKLLMK-G 253 (661)
T ss_pred cccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc------CCCCCCcHHHHHHHcCCCcHHHHHHHHh-C
Confidence 599999986 5689999999999999999 889999999999999985 79999985 7
Q ss_pred ccc
Q 003650 666 LVA 668 (805)
Q Consensus 666 a~~ 668 (805)
++.
T Consensus 254 ~d~ 256 (661)
T PHA02917 254 IDN 256 (661)
T ss_pred Ccc
Confidence 644
No 46
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.60 E-value=2.1e-15 Score=155.22 Aligned_cols=127 Identities=18% Similarity=0.254 Sum_probs=112.3
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHH
Q 003650 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (805)
Q Consensus 533 ~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa 611 (805)
.+.+..|||+||..|+.. +++.|+. |+.+|..+....||||+||..||.++|..|++..+|+|+.+..|+|||||||
T Consensus 31 ddhgfsplhwaakegh~a--ivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyac 108 (448)
T KOG0195|consen 31 DDHGFSPLHWAAKEGHVA--IVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYAC 108 (448)
T ss_pred cccCcchhhhhhhcccHH--HHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhh
Confidence 356788999999999977 8998888 9999999999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccc
Q 003650 612 YYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 667 (805)
Q Consensus 612 ~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~ 667 (805)
..|...+++-|+.+||.+++ .|++|.|||+.|.-.-..-+.++--++|-.
T Consensus 109 fwgydqiaedli~~ga~v~i------cnk~g~tpldkakp~l~~~l~e~aek~gq~ 158 (448)
T KOG0195|consen 109 FWGYDQIAEDLISCGAAVNI------CNKKGMTPLDKAKPMLKNTLLEIAEKHGQS 158 (448)
T ss_pred hhcHHHHHHHHHhccceeee------cccCCCCchhhhchHHHHHHHHHHHHhCCC
Confidence 99999999999999999999 889999999988654333444444455643
No 47
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.60 E-value=5.9e-15 Score=130.66 Aligned_cols=88 Identities=28% Similarity=0.338 Sum_probs=68.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcC
Q 003650 574 IHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKG 653 (805)
Q Consensus 574 LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g 653 (805)
||+||..|+.+++++|++.+.+++. |.||||+||..|+.+++++|++.|++++. +|..|.||||+|+..|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~ 70 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINS------QDKNGNTALHYAAENG 70 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-------BSTTSSBHHHHHHHTT
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccc------cCCCCCCHHHHHHHcC
Confidence 6788888888888888887777776 77788888888888888888888888777 6678888888888888
Q ss_pred CHHHHHHHHHcccccCcc
Q 003650 654 FDGLAAFLSEQALVAQFN 671 (805)
Q Consensus 654 ~~~iv~lLle~Ga~~~~~ 671 (805)
+.+++++|+++|++.+.+
T Consensus 71 ~~~~~~~Ll~~g~~~~~~ 88 (89)
T PF12796_consen 71 NLEIVKLLLEHGADVNIR 88 (89)
T ss_dssp HHHHHHHHHHTTT-TTSS
T ss_pred CHHHHHHHHHcCCCCCCc
Confidence 888888888888766543
No 48
>PHA02917 ankyrin-like protein; Provisional
Probab=99.59 E-value=9.9e-15 Score=174.08 Aligned_cols=152 Identities=10% Similarity=-0.045 Sum_probs=115.0
Q ss_pred CHHHHHHHhCCCCCC----cccccchHHHHHHcCCcH--HHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHH
Q 003650 518 SWAYLFKSVGDKRTS----LPEAKDSFFELTLKSKLK--EWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFS 590 (805)
Q Consensus 518 ~~~~li~~l~~~~~~----~~~~~t~L~~Aa~~~~l~--~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL 590 (805)
+..++++.+.+.+.+ ...+.||||+|+..++.. ..+++.|++ +...|..|. .+++|+|+..|+.++|++|+
T Consensus 46 ~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll 123 (661)
T PHA02917 46 NNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLV 123 (661)
T ss_pred CcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHH
Confidence 445666655444333 345789999999988743 225677765 444555443 37788889999999999999
Q ss_pred HCCCCCCcccCCCCchhhHHH--hcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC-----------CcHHHHHHH------
Q 003650 591 WSGLSLDFRDKYGWTALHWAA--YYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-----------LNAADIASK------ 651 (805)
Q Consensus 591 ~~Gadvn~~D~~G~TpLh~Aa--~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G-----------~TpL~lA~~------ 651 (805)
++|+++|..|.+|+||||+|+ ..|+.++|++|+++||+++.... .+..| .||||+|+.
T Consensus 124 ~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~---~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~ 200 (661)
T PHA02917 124 EHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE---DDEYGYAYDDYQPRNCGTVLHLYIISHLYSE 200 (661)
T ss_pred HcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc---ccccccccccccccccccHHHHHHhhccccc
Confidence 999999999999999999654 57899999999999999986211 22233 699999986
Q ss_pred -----cCCHHHHHHHHHcccccCccccc
Q 003650 652 -----KGFDGLAAFLSEQALVAQFNDMT 674 (805)
Q Consensus 652 -----~g~~~iv~lLle~Ga~~~~~~~~ 674 (805)
.++.+++++|+++|++.+..+..
T Consensus 201 ~~~~~~~~~eiv~~Li~~Gadvn~~d~~ 228 (661)
T PHA02917 201 SDTRAYVRPEVVKCLINHGIKPSSIDKN 228 (661)
T ss_pred ccccccCcHHHHHHHHHCCCCcccCCCC
Confidence 46899999999999988776543
No 49
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.59 E-value=6.3e-15 Score=156.27 Aligned_cols=140 Identities=21% Similarity=0.206 Sum_probs=114.8
Q ss_pred HHHHHHhCCCCC-C----cccccchHHHHHHcC---CcHHHHHHHHHcCCCCCc-cCCCCChHHHHHHHcCCHHHHHHHH
Q 003650 520 AYLFKSVGDKRT-S----LPEAKDSFFELTLKS---KLKEWLLERVVEGSKTTE-YDVHGQGVIHLCAMLGYTWAILLFS 590 (805)
Q Consensus 520 ~~li~~l~~~~~-~----~~~~~t~L~~Aa~~~---~l~~~lv~~Ll~Gadin~-~D~~G~T~LH~Aa~~G~~~~v~~LL 590 (805)
..+++.+.+.++ + ...|.||++.+++.. .-..-+++.|-.-+|+|. ....|+|+|++|+..|+.++|+.||
T Consensus 281 F~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LL 360 (452)
T KOG0514|consen 281 FDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALL 360 (452)
T ss_pred hHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHH
Confidence 445555544432 2 234789999887642 222236777777668998 4568999999999999999999999
Q ss_pred HCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcc
Q 003650 591 WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (805)
Q Consensus 591 ~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~-~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~G 665 (805)
..|||||.+|.+|.|+|++||.+||.+||++||. .++|+.+ .|.+|.|+|.+|...||.+|.-+|..+-
T Consensus 361 acgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sL------tD~DgSTAl~IAleagh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 361 ACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISL------TDVDGSTALSIALEAGHREIAVMLYAHM 430 (452)
T ss_pred HccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccccee------ecCCCchhhhhHHhcCchHHHHHHHHHH
Confidence 9999999999999999999999999999999996 5688777 7899999999999999999999887664
No 50
>PHA02795 ankyrin-like protein; Provisional
Probab=99.58 E-value=9.5e-15 Score=164.02 Aligned_cols=132 Identities=10% Similarity=-0.015 Sum_probs=115.8
Q ss_pred ccccchHHHHHH--cCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcc------cCCCC
Q 003650 534 PEAKDSFFELTL--KSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR------DKYGW 604 (805)
Q Consensus 534 ~~~~t~L~~Aa~--~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~------D~~G~ 604 (805)
...+|+||.++. .++.+ ++++|++ |++++.. .+.||||+|+..|+.+++++|+++|++.+.. +..|.
T Consensus 114 ~~~~~~L~~~~~n~~n~~e--iV~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~ 189 (437)
T PHA02795 114 NSVQDLLLYYLSNAYVEID--IVDFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQY 189 (437)
T ss_pred ccccHHHHHHHHhcCCCHH--HHHHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhcc
Confidence 347899999999 66665 8999998 9999984 4589999999999999999999999854322 23588
Q ss_pred chhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcccccc
Q 003650 605 TALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 675 (805)
Q Consensus 605 TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l 675 (805)
||+|.|+..++.+++++|+++||++|. +|..|.||||+|+..|+.+++++|+++|++.+..+...
T Consensus 190 t~l~~a~~~~~~eIve~LIs~GADIN~------kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G 254 (437)
T PHA02795 190 TRGFLVDEPTVLEIYKLCIPYIEDINQ------LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNG 254 (437)
T ss_pred chhHHHHhcCHHHHHHHHHhCcCCcCc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 999999999999999999999999998 89999999999999999999999999999887765543
No 51
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.58 E-value=6.9e-15 Score=178.38 Aligned_cols=144 Identities=20% Similarity=0.254 Sum_probs=130.7
Q ss_pred CCCCCCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCc
Q 003650 527 GDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWT 605 (805)
Q Consensus 527 ~~~~~~~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~T 605 (805)
.+....+.++.|+||.|+..|+.. ++..+++ ++..+...+.|.|+||+|+..++..+++.++.+|++++.++..|.|
T Consensus 465 ~~~n~~s~~G~T~Lhlaaq~Gh~~--~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~T 542 (1143)
T KOG4177|consen 465 ADPNAVSKQGFTPLHLAAQEGHTE--VVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYT 542 (1143)
T ss_pred CCcchhccccCcchhhhhccCCch--HHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccc
Confidence 333455778999999999999987 6677777 7778888889999999999999999999999999999999999999
Q ss_pred hhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCccccccccc
Q 003650 606 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN 678 (805)
Q Consensus 606 pLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l~~~ 678 (805)
|||.||.+|+.++|++||++||++++ +++.|+||||.|+..|+.+|+.+|+++|++++..+......
T Consensus 543 pLh~A~~~g~v~~VkfLLe~gAdv~a------k~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~Tp 609 (1143)
T KOG4177|consen 543 PLHVAVHYGNVDLVKFLLEHGADVNA------KDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTP 609 (1143)
T ss_pred hHHHHHhcCCchHHHHhhhCCccccc------cCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcch
Confidence 99999999999999999999999999 88999999999999999999999999999998877766553
No 52
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.56 E-value=1.5e-14 Score=128.14 Aligned_cols=86 Identities=30% Similarity=0.392 Sum_probs=79.2
Q ss_pred HHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHH
Q 003650 540 FFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 618 (805)
Q Consensus 540 L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~i 618 (805)
||.|+..++.. +++.|++ +.+++. |.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.++
T Consensus 1 L~~A~~~~~~~--~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLE--ILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHH--HHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHH--HHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHH
Confidence 78999999988 7888887 877766 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCC
Q 003650 619 VVDLLSAGAKPNL 631 (805)
Q Consensus 619 V~~LL~~GAd~n~ 631 (805)
+++|+++|++++.
T Consensus 75 ~~~Ll~~g~~~~~ 87 (89)
T PF12796_consen 75 VKLLLEHGADVNI 87 (89)
T ss_dssp HHHHHHTTT-TTS
T ss_pred HHHHHHcCCCCCC
Confidence 9999999999987
No 53
>PHA02730 ankyrin-like protein; Provisional
Probab=99.56 E-value=2.7e-14 Score=167.44 Aligned_cols=143 Identities=13% Similarity=0.045 Sum_probs=113.4
Q ss_pred HHHHHHHhCCCCCC---cccccchHHHHHHcCCc---HHHHHHHHHc-CC--CCCccCCCCChHHHH---HHHcC-----
Q 003650 519 WAYLFKSVGDKRTS---LPEAKDSFFELTLKSKL---KEWLLERVVE-GS--KTTEYDVHGQGVIHL---CAMLG----- 581 (805)
Q Consensus 519 ~~~li~~l~~~~~~---~~~~~t~L~~Aa~~~~l---~~~lv~~Ll~-Ga--din~~D~~G~T~LH~---Aa~~G----- 581 (805)
..++++.|...+.+ ...+.||||.|+..++. .+ ++++|++ |+ ++|.+|..|.||||. |+..+
T Consensus 358 ~ieIvelLIs~GAdIN~k~~G~TpLH~Aa~~nnn~i~~e-IvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~ 436 (672)
T PHA02730 358 SIPILRCMLDNGATMDKTTDNNYPLHDYFVNNNNIVDVN-VVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHC 436 (672)
T ss_pred cHHHHHHHHHCCCCCCcCCCCCcHHHHHHHHcCCcchHH-HHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccc
Confidence 34555555444332 24678999999888752 23 8888887 76 688899999999984 33332
Q ss_pred ----CHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCC-CCCcHHHHHHHc--CC
Q 003650 582 ----YTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNP-GGLNAADIASKK--GF 654 (805)
Q Consensus 582 ----~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~-~G~TpL~lA~~~--g~ 654 (805)
..+++++|+.+|+++|.+|..|+||||+|+..++.+++++|+++||++|. +|. .|.||||+|+.. ++
T Consensus 437 ~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~------~d~~~g~TaL~~Aa~~~~~~ 510 (672)
T PHA02730 437 YETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNT------TSRSIINTAIQKSSYRRENK 510 (672)
T ss_pred cchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCcCCcCHHHHHHHhhcCc
Confidence 12568999999999999999999999999999999999999999999998 665 589999999874 78
Q ss_pred HHHHHHHHHccccc
Q 003650 655 DGLAAFLSEQALVA 668 (805)
Q Consensus 655 ~~iv~lLle~Ga~~ 668 (805)
.+++++|+++|++.
T Consensus 511 ~eIv~~LLs~ga~i 524 (672)
T PHA02730 511 TKLVDLLLSYHPTL 524 (672)
T ss_pred HHHHHHHHHcCCCH
Confidence 99999999999654
No 54
>PHA02741 hypothetical protein; Provisional
Probab=99.56 E-value=1.7e-14 Score=143.98 Aligned_cols=105 Identities=24% Similarity=0.261 Sum_probs=93.4
Q ss_pred CCccCCCCChHHHHHHHcCCHHHHHHHHH------CCCCCCcccCCCCchhhHHHhcCC----HHHHHHHHHcCCCCCCC
Q 003650 563 TTEYDVHGQGVIHLCAMLGYTWAILLFSW------SGLSLDFRDKYGWTALHWAAYYGR----EKMVVDLLSAGAKPNLV 632 (805)
Q Consensus 563 in~~D~~G~T~LH~Aa~~G~~~~v~~LL~------~Gadvn~~D~~G~TpLh~Aa~~G~----~~iV~~LL~~GAd~n~~ 632 (805)
++.+|..|.|+||+||..|+.++++.|+. .|++++.+|..|+||||+|+..|+ .+++++|++.|++++.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~- 92 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA- 92 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC-
Confidence 45678899999999999999999998853 478999999999999999999999 5899999999999998
Q ss_pred CCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHH-cccccCcccc
Q 003650 633 TDPTSQNP-GGLNAADIASKKGFDGLAAFLSE-QALVAQFNDM 673 (805)
Q Consensus 633 td~~~~d~-~G~TpL~lA~~~g~~~iv~lLle-~Ga~~~~~~~ 673 (805)
+|. .|.||||+|+..++.+++++|+. .|++.+..+.
T Consensus 93 -----~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~ 130 (169)
T PHA02741 93 -----QEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNA 130 (169)
T ss_pred -----CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence 774 89999999999999999999998 5877665543
No 55
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.54 E-value=4.8e-15 Score=152.54 Aligned_cols=127 Identities=21% Similarity=0.159 Sum_probs=109.4
Q ss_pred HHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHH
Q 003650 541 FELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMV 619 (805)
Q Consensus 541 ~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV 619 (805)
+.-|..|+-.+ +.-.|.+ ..|.|.-|..|.+||||||..|+..+++.|+.+|+.+|..+....||||+|+.+||.++|
T Consensus 5 f~wcregna~q-vrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdiv 83 (448)
T KOG0195|consen 5 FGWCREGNAFQ-VRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIV 83 (448)
T ss_pred hhhhhcCCeEE-EEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHH
Confidence 44455565332 1111223 668889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCccccc
Q 003650 620 VDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 674 (805)
Q Consensus 620 ~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~ 674 (805)
..||+..+|+|+ .|..|.||||+||..|...|++-|+..|+..++.+..
T Consensus 84 qkll~~kadvna------vnehgntplhyacfwgydqiaedli~~ga~v~icnk~ 132 (448)
T KOG0195|consen 84 QKLLSRKADVNA------VNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKK 132 (448)
T ss_pred HHHHHHhcccch------hhccCCCchhhhhhhcHHHHHHHHHhccceeeecccC
Confidence 999999999999 7899999999999999999999999999877665544
No 56
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.53 E-value=1.6e-14 Score=160.47 Aligned_cols=134 Identities=22% Similarity=0.254 Sum_probs=116.0
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcc------------
Q 003650 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR------------ 599 (805)
Q Consensus 533 ~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~------------ 599 (805)
..++.|+||.+|...+.. ++.+|++ |++||..|..||||||.|+..||..++++|+..|+++-..
T Consensus 70 n~DglTalhq~~id~~~e--~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e 147 (527)
T KOG0505|consen 70 NVDGLTALHQACIDDNLE--MVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAE 147 (527)
T ss_pred CCccchhHHHHHhcccHH--HHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCcccccc
Confidence 456889999999999877 7888888 9999999999999999999999999999999877653332
Q ss_pred -----------------------------------------------cCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCC
Q 003650 600 -----------------------------------------------DKYGWTALHWAAYYGREKMVVDLLSAGAKPNLV 632 (805)
Q Consensus 600 -----------------------------------------------D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~ 632 (805)
+..|-|+||.|+..|..++.++|+.+|.++++
T Consensus 148 ~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~- 226 (527)
T KOG0505|consen 148 DEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNI- 226 (527)
T ss_pred CcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCccc-
Confidence 34588999999999999999999999999998
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCccccc
Q 003650 633 TDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 674 (805)
Q Consensus 633 td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~ 674 (805)
+|.+|+||||.|+..|+.+++++|+++|++.+.....
T Consensus 227 -----~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~ 263 (527)
T KOG0505|consen 227 -----KDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKM 263 (527)
T ss_pred -----ccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhc
Confidence 8999999999999999999999999999877654443
No 57
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.52 E-value=3.5e-14 Score=120.83 Aligned_cols=72 Identities=22% Similarity=0.357 Sum_probs=65.3
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeecceeeccccceeeeCCC-CCCCeeEEEEEeCCCCcc
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPP-HSPGLFLLYMSLDGHKPI 444 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pp-h~~G~V~l~v~~~n~~~~ 444 (805)
.|+.++|+||++.||+||+|+|.+|.++ +.|+||++.+-.++|++.+|+|.+|| |.||.|.++++.....-|
T Consensus 2 ~I~ai~P~eG~~tGGt~VtI~GenF~~g-------l~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~~ 74 (85)
T cd01175 2 CIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFC 74 (85)
T ss_pred cccEecCCCCcccCCeEEEEECCCCCCC-------cEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceeec
Confidence 5999999999999999999999766543 89999999999999999999999999 799999999999776544
No 58
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.50 E-value=1.5e-13 Score=158.32 Aligned_cols=122 Identities=20% Similarity=0.142 Sum_probs=84.6
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc------CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCC------------
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE------GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS------------ 595 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~------Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gad------------ 595 (805)
..+..++|+|+..|..+ ..+..+. +..+|..+..|.||||.|+..|+.++++.+|..|+.
T Consensus 185 ~~~~~~iH~aa~s~s~e--~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~ 262 (929)
T KOG0510|consen 185 IDGNFPIHEAARSGSKE--CMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQE 262 (929)
T ss_pred CcCCchHHHHHHhcchh--hhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHH
Confidence 34556666666666654 3333322 445666777777777777777777777777766643
Q ss_pred ---CCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 003650 596 ---LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 663 (805)
Q Consensus 596 ---vn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle 663 (805)
+|..|++|.||||+||..|+.+++..|+..||+++. ++.++.||||.|+..|...+++-|++
T Consensus 263 kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~------kn~d~~spLH~AA~yg~~ntv~rLL~ 327 (929)
T KOG0510|consen 263 KELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINS------KNKDEESPLHFAAIYGRINTVERLLQ 327 (929)
T ss_pred HHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccc------cCCCCCCchHHHHHcccHHHHHHHHh
Confidence 233467777777777777777777777777777777 67777777777777777777777777
No 59
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.50 E-value=5.5e-14 Score=156.14 Aligned_cols=139 Identities=22% Similarity=0.346 Sum_probs=124.5
Q ss_pred chHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCH
Q 003650 538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 616 (805)
Q Consensus 538 t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~ 616 (805)
-.++.||..+++.+ ++.|+. |+++|..+.+|.|+||-+|.-.+.+||++|+++|++||..|..||||||-|+.+||.
T Consensus 42 a~~l~A~~~~d~~e--v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~ 119 (527)
T KOG0505|consen 42 AVFLEACSRGDLEE--VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYL 119 (527)
T ss_pred HHHHhccccccHHH--HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccH
Confidence 46778889999886 455555 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCC-----------------------------------------------------CCCCCCCCCC
Q 003650 617 KMVVDLLSAGAKPNLVT-----------------------------------------------------DPTSQNPGGL 643 (805)
Q Consensus 617 ~iV~~LL~~GAd~n~~t-----------------------------------------------------d~~~~d~~G~ 643 (805)
.++.+|+.+||++.+++ ++++.+..|.
T Consensus 120 ~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~ 199 (527)
T KOG0505|consen 120 NIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGA 199 (527)
T ss_pred HHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccc
Confidence 99999999999987763 6666777799
Q ss_pred cHHHHHHHcCCHHHHHHHHHcccccCccccccccc
Q 003650 644 NAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGN 678 (805)
Q Consensus 644 TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l~~~ 678 (805)
|+||+|+.+|+.+++++|+++|.+..+++......
T Consensus 200 T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtP 234 (527)
T KOG0505|consen 200 TALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTP 234 (527)
T ss_pred hHHHHHHhhhHHHHHHHHHHhccCcccccccCCCc
Confidence 99999999999999999999999888887765443
No 60
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.50 E-value=6.4e-14 Score=139.46 Aligned_cols=107 Identities=21% Similarity=0.171 Sum_probs=94.6
Q ss_pred CCCCCccCCCCChHHHHHHHcCCH----HHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHH---HHHHHHcCCCCCCC
Q 003650 560 GSKTTEYDVHGQGVIHLCAMLGYT----WAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM---VVDLLSAGAKPNLV 632 (805)
Q Consensus 560 Gadin~~D~~G~T~LH~Aa~~G~~----~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~i---V~~LL~~GAd~n~~ 632 (805)
|++++..+..+.++||.||..|+. +++++|+..|++++.+|..|+||||+|+..|+.++ +++|++.|++++.
T Consensus 10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~- 88 (166)
T PHA02743 10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA- 88 (166)
T ss_pred chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC-
Confidence 567777888999999999999997 56667889999999999999999999999998654 7999999999998
Q ss_pred CCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHH-cccccCccc
Q 003650 633 TDPTSQN-PGGLNAADIASKKGFDGLAAFLSE-QALVAQFND 672 (805)
Q Consensus 633 td~~~~d-~~G~TpL~lA~~~g~~~iv~lLle-~Ga~~~~~~ 672 (805)
+| ..|.||||+|+..|+.+++++|++ .|++....+
T Consensus 89 -----~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 125 (166)
T PHA02743 89 -----RELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAIN 125 (166)
T ss_pred -----CCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcC
Confidence 77 589999999999999999999995 787766544
No 61
>PHA02792 ankyrin-like protein; Provisional
Probab=99.49 E-value=1.4e-13 Score=159.98 Aligned_cols=143 Identities=15% Similarity=0.097 Sum_probs=117.6
Q ss_pred HHHHHHHhCCCCCCcc--cccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCC--ChHHHHHHHcCCHH---HHHHHH
Q 003650 519 WAYLFKSVGDKRTSLP--EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHG--QGVIHLCAMLGYTW---AILLFS 590 (805)
Q Consensus 519 ~~~li~~l~~~~~~~~--~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G--~T~LH~Aa~~G~~~---~v~~LL 590 (805)
..++++.+.+.+.... .....++.||..++.. ++++|++ |+++|.+|..| .||||+|+...... ++++|+
T Consensus 320 ~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~e--IVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLI 397 (631)
T PHA02792 320 YINVIKCMIDEGATLYRFKHINKYFQKFDNRDPK--VVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCK 397 (631)
T ss_pred cHHHHHHHHHCCCccccCCcchHHHHHHHcCCHH--HHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHH
Confidence 3456666666665432 3456788998888877 8999998 99999988775 69999987766543 578889
Q ss_pred HCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHH----------cCCHHHHHH
Q 003650 591 WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK----------KGFDGLAAF 660 (805)
Q Consensus 591 ~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~----------~g~~~iv~l 660 (805)
.+|+++|.+|..|+||||+|+..++.+++++|+++||+++. +|..|.|||++|+. ....+++++
T Consensus 398 s~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~------kD~~G~TpL~~A~~~~~~~~~~i~~~~~~il~l 471 (631)
T PHA02792 398 PYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI------TTKYGSTCIGICVILAHACIPEIAELYIKILEI 471 (631)
T ss_pred hcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 88999999999976 223567888
Q ss_pred HHHcccccC
Q 003650 661 LSEQALVAQ 669 (805)
Q Consensus 661 Lle~Ga~~~ 669 (805)
|+++|.+..
T Consensus 472 LLs~~p~i~ 480 (631)
T PHA02792 472 ILSKLPTIE 480 (631)
T ss_pred HHhcCCChh
Confidence 898885543
No 62
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.48 E-value=5e-13 Score=122.89 Aligned_cols=121 Identities=26% Similarity=0.344 Sum_probs=111.7
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHh
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~ 612 (805)
..+.++|+.|+..++.. +++.|++ |.+.+..+..|.||||+|+..+..+++++|+..|++++..+..|.||+|+|+.
T Consensus 5 ~~g~t~l~~a~~~~~~~--~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 5 EDGRTPLHLAASNGHLE--VVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred cCCCCHHHHHHHcCcHH--HHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 45789999999999975 6777777 88888999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 003650 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 662 (805)
Q Consensus 613 ~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLl 662 (805)
.++.+++++|+..|.+.+. .|..|.||+++|...++.+++++|+
T Consensus 83 ~~~~~~~~~L~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 83 NGNLDVVKLLLKHGADVNA------RDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred cCcHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 9999999999999988877 7889999999999999999999874
No 63
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.47 E-value=2.2e-13 Score=147.41 Aligned_cols=106 Identities=12% Similarity=-0.021 Sum_probs=92.6
Q ss_pred CccCCCCChH-HHHHHHcCCHHHHHHHHHCCCCCCccc----CCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 003650 564 TEYDVHGQGV-IHLCAMLGYTWAILLFSWSGLSLDFRD----KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQ 638 (805)
Q Consensus 564 n~~D~~G~T~-LH~Aa~~G~~~~v~~LL~~Gadvn~~D----~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~ 638 (805)
-.+|..|.|+ ||.|+..|+.+++++|+++|+++|.++ ..|.||||+|+..|+.+++++|+++||+++. +
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~------~ 99 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNR------Y 99 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCc------c
Confidence 3467777775 555666789999999999999999984 5899999999999999999999999999998 4
Q ss_pred -CCCCCcHHHHHHHcCCHHHHHHHHHcccccCcccccc
Q 003650 639 -NPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 675 (805)
Q Consensus 639 -d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l 675 (805)
+..|.||||+|+..|+.+++++|+++|++.+..+...
T Consensus 100 ~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G 137 (300)
T PHA02884 100 AEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDM 137 (300)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 3579999999999999999999999999988765444
No 64
>PHA02730 ankyrin-like protein; Provisional
Probab=99.47 E-value=1.9e-13 Score=160.29 Aligned_cols=133 Identities=9% Similarity=-0.024 Sum_probs=114.1
Q ss_pred ccccchHHHHHHcCC--cHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcC--CHHHHHHHHHCCC--CCCcccCCCCch
Q 003650 534 PEAKDSFFELTLKSK--LKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLG--YTWAILLFSWSGL--SLDFRDKYGWTA 606 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~--l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G--~~~~v~~LL~~Ga--dvn~~D~~G~Tp 606 (805)
..|.|+||.|+..++ ..+ ++++|++ |++++.+|..|+||||+|+..| +.++|++|+..|+ +++..|.-+++|
T Consensus 39 ~~G~TaLh~A~~~~~~~~~e-ivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~ 117 (672)
T PHA02730 39 RRGNNALHCYVSNKCDTDIK-IVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFD 117 (672)
T ss_pred CCCCcHHHHHHHcCCcCcHH-HHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCch
Confidence 358899999999875 133 8899998 9999999999999999999977 7999999999965 558888889999
Q ss_pred hhHHHh--cCCHHHHHHHHH-cCCCCCCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcccccC
Q 003650 607 LHWAAY--YGREKMVVDLLS-AGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQ 669 (805)
Q Consensus 607 Lh~Aa~--~G~~~iV~~LL~-~GAd~n~~td~~~~d-~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~ 669 (805)
||.++. .++.++|++|+. .|++++... +.++ ..|.+|+++|+..++.+++++|+++|++..
T Consensus 118 l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~--~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~ 182 (672)
T PHA02730 118 LYSYMSSDNIDLRLLKYLIVDKRIRPSKNT--NYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYST 182 (672)
T ss_pred HHHHHHhcCCcHHHHHHHHHhcCCChhhhh--hhhccccchhhhhHhcCCCchHHHHHHHHcCCccc
Confidence 999999 899999999996 778888621 1122 389999999999999999999999998873
No 65
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.47 E-value=2.6e-13 Score=166.78 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=98.5
Q ss_pred CCCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCC--------------------------
Q 003650 530 RTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-------------------------- 582 (805)
Q Consensus 530 ~~~~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~-------------------------- 582 (805)
+.....+.||||.|+..|+.. ++++|++ |+++|.+|..|.||||+|+..|+
T Consensus 552 n~~d~~G~TpLh~Aa~~g~~~--~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~A 629 (823)
T PLN03192 552 DIGDSKGRTPLHIAASKGYED--CVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTA 629 (823)
T ss_pred CCCCCCCCCHHHHHHHcChHH--HHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHH
Confidence 334456899999999999876 7788888 99999999999999886655554
Q ss_pred -----HHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCC-CcHHHHHHHc
Q 003650 583 -----TWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGG-LNAADIASKK 652 (805)
Q Consensus 583 -----~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G-~TpL~lA~~~ 652 (805)
.++++.|+++|+++|.+|..|+||||+|+..|+.+++++|+++||+++. .|..| .||++++...
T Consensus 630 a~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~------~~~~g~~t~~~l~~~~ 699 (823)
T PLN03192 630 AKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDK------ANTDDDFSPTELRELL 699 (823)
T ss_pred HHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCC------CCCCCCCCHHHHHHHH
Confidence 5566677889999999999999999999999999999999999999998 67777 9999887543
No 66
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.45 E-value=5.4e-13 Score=135.15 Aligned_cols=123 Identities=31% Similarity=0.429 Sum_probs=113.3
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCC-----HHHHHHHHHCCC---CCCcccCCCCc
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGY-----TWAILLFSWSGL---SLDFRDKYGWT 605 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~-----~~~v~~LL~~Ga---dvn~~D~~G~T 605 (805)
...++++.++..+... ++..++. |.+++.+|..|.||||+|+..|+ .++++.|+..|+ +.+.+|..|+|
T Consensus 72 ~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~t 149 (235)
T COG0666 72 DGRLPLHSAASKGDDK--IVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNT 149 (235)
T ss_pred cccCHHHHHHHcCcHH--HHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCc
Confidence 3678999999998876 4555555 99999999999999999999999 999999999999 66667999999
Q ss_pred hhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcc
Q 003650 606 ALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (805)
Q Consensus 606 pLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~G 665 (805)
|||+|+..|+.+++++|++.|++++. .+..|.|++++|+..++.+++..|+..+
T Consensus 150 pl~~A~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 150 PLHWAALNGDADIVELLLEAGADPNS------RNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred hhHHHHHcCchHHHHHHHhcCCCCcc------cccCCCcchhhhcccchHHHHHHHHhcC
Confidence 99999999999999999999999998 7899999999999999999999999987
No 67
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=2.1e-13 Score=149.90 Aligned_cols=119 Identities=22% Similarity=0.302 Sum_probs=104.9
Q ss_pred hHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHH
Q 003650 539 SFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREK 617 (805)
Q Consensus 539 ~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~ 617 (805)
-|+-|++.|.++ |++.++. -.|+...+..|-|+||-|+..||.++|++||..|+|||+.|.+||||||+||.+++..
T Consensus 553 LLLDaaLeGEld--lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~ 630 (752)
T KOG0515|consen 553 LLLDAALEGELD--LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVP 630 (752)
T ss_pred HHHhhhhcchHH--HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchH
Confidence 467788999887 6776665 6677788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHHHHc
Q 003650 618 MVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS--KKGFDGLAAFLSEQ 664 (805)
Q Consensus 618 iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~--~~g~~~iv~lLle~ 664 (805)
+++.|++.||.+-+.| -.++.||.+-+- ..|+.+|.+||...
T Consensus 631 ~ckqLVe~GaavfAsT-----lSDmeTa~eKCee~eeGY~~CsqyL~~v 674 (752)
T KOG0515|consen 631 MCKQLVESGAAVFAST-----LSDMETAAEKCEEMEEGYDQCSQYLYGV 674 (752)
T ss_pred HHHHHHhccceEEeee-----cccccchhhhcchhhhhHHHHHHHHHHH
Confidence 9999999999998744 368899998775 35899999999654
No 68
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.42 E-value=3.2e-13 Score=132.30 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=86.9
Q ss_pred ccccchHHHHHHcCCcHH-HHHHHHHc-CCCCCccC-CCCChHHHHHHHcCCHHHHHHHHH-CCCCCCcccCCCCchhhH
Q 003650 534 PEAKDSFFELTLKSKLKE-WLLERVVE-GSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSW-SGLSLDFRDKYGWTALHW 609 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~-~lv~~Ll~-Gadin~~D-~~G~T~LH~Aa~~G~~~~v~~LL~-~Gadvn~~D~~G~TpLh~ 609 (805)
..+.|+||.|+..++... -++++|++ |+++|.+| ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+
T Consensus 53 ~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~ 132 (154)
T PHA02736 53 RHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYV 132 (154)
T ss_pred CCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHH
Confidence 357899999999988641 15667777 99999998 589999999999999999999997 599999999999999999
Q ss_pred HHhcCCHHHHHHHHHcCCCCC
Q 003650 610 AAYYGREKMVVDLLSAGAKPN 630 (805)
Q Consensus 610 Aa~~G~~~iV~~LL~~GAd~n 630 (805)
|+..|+.+++++|+..|++++
T Consensus 133 A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 133 ACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHcCCHHHHHHHHHcCCCCC
Confidence 999999999999999999875
No 69
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.41 E-value=2.4e-13 Score=155.52 Aligned_cols=125 Identities=20% Similarity=0.185 Sum_probs=118.0
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhc
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~ 613 (805)
++.|.||+|+++|+.. ++.+|++ .+-++..|..|.+|||+||+.|+.++++.|+.++..+|.....|.||||.|+.+
T Consensus 48 ~gfTalhha~Lng~~~--is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqh 125 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQ--ISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQH 125 (854)
T ss_pred cchhHHHHHHhcCchH--HHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhh
Confidence 5789999999999988 8888888 888888999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccc
Q 003650 614 GREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALV 667 (805)
Q Consensus 614 G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~ 667 (805)
||.+++.+||.+|+|+-. +|+.+.|+|++|+..|..+++++|+.....
T Consensus 126 gh~dvv~~Ll~~~adp~i------~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~ 173 (854)
T KOG0507|consen 126 GHLEVVFYLLKKNADPFI------RNNSKETVLDLASRFGRAEVVQMLLQKKFP 173 (854)
T ss_pred cchHHHHHHHhcCCCccc------cCcccccHHHHHHHhhhhHHHHHHhhhccc
Confidence 999999999999999988 889999999999999999999999988533
No 70
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.41 E-value=5.6e-13 Score=162.38 Aligned_cols=154 Identities=17% Similarity=0.022 Sum_probs=116.9
Q ss_pred hhhhhhcccCCHHHHHHHhCCCCCCcccccchHHHHHHcCC-cHHHHHHHHHc-CCC------CCc----cCCCCChHHH
Q 003650 508 FASKSTCISNSWAYLFKSVGDKRTSLPEAKDSFFELTLKSK-LKEWLLERVVE-GSK------TTE----YDVHGQGVIH 575 (805)
Q Consensus 508 ~a~~i~~~~~~~~~li~~l~~~~~~~~~~~t~L~~Aa~~~~-l~~~lv~~Ll~-Gad------in~----~D~~G~T~LH 575 (805)
.+....+..++..++++.+...+.....|.|+||.|+..+. ..+.++..+.. +.+ ++. .+..|.||||
T Consensus 54 t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLh 133 (743)
T TIGR00870 54 SALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALH 133 (743)
T ss_pred hHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHH
Confidence 33333555677788888876666444568899999887322 12224455444 321 111 2356999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCccc--------------CCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 003650 576 LCAMLGYTWAILLFSWSGLSLDFRD--------------KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPG 641 (805)
Q Consensus 576 ~Aa~~G~~~~v~~LL~~Gadvn~~D--------------~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~ 641 (805)
+||..|+.++|++|+++|+++|.++ ..|.||||+|+..|+.+++++|++.|+|++. +|..
T Consensus 134 lAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~------~d~~ 207 (743)
T TIGR00870 134 LAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT------ADSL 207 (743)
T ss_pred HHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh------Hhhh
Confidence 9999999999999999999999764 2589999999999999999999999999988 8899
Q ss_pred CCcHHHHHHHcC---------CHHHHHHHHHcccc
Q 003650 642 GLNAADIASKKG---------FDGLAAFLSEQALV 667 (805)
Q Consensus 642 G~TpL~lA~~~g---------~~~iv~lLle~Ga~ 667 (805)
|.||||+|+..+ ...+.+++++.++.
T Consensus 208 g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~ 242 (743)
T TIGR00870 208 GNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDK 242 (743)
T ss_pred hhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 999999999986 34566777776644
No 71
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.41 E-value=5.6e-13 Score=128.87 Aligned_cols=121 Identities=18% Similarity=0.145 Sum_probs=101.5
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHH
Q 003650 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (805)
Q Consensus 533 ~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa 611 (805)
-.++.||||.|+..|++. ++..|+. |++++.+...||||||-||.-.+.+++.+||.+|+|||+.....+||||+||
T Consensus 94 D~D~YTpLHRAaYn~h~d--iv~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa 171 (228)
T KOG0512|consen 94 DEDEYTPLHRAAYNGHLD--IVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAA 171 (228)
T ss_pred ccccccHHHHHHhcCchH--HHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhh
Confidence 356889999999999998 5666555 9999999999999999999999999999999999999999999999999999
Q ss_pred hcCCH-HHHHHHH-HcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003650 612 YYGRE-KMVVDLL-SAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (805)
Q Consensus 612 ~~G~~-~iV~~LL-~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~ 664 (805)
...+. ..+.+|+ ..+..+.. ++..+.||+++|.+.+ +..+|.+.
T Consensus 172 ~~rn~r~t~~~Ll~dryi~pg~------~nn~eeta~~iARRT~---~s~~lfe~ 217 (228)
T KOG0512|consen 172 GNRNSRDTLELLLHDRYIHPGL------KNNLEETAFDIARRTS---MSHYLFEI 217 (228)
T ss_pred cccchHHHHHHHhhccccChhh------hcCccchHHHHHHHhh---hhHHHHHH
Confidence 87654 4566665 46677766 8899999999998764 33444443
No 72
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.41 E-value=4.3e-13 Score=117.21 Aligned_cols=104 Identities=25% Similarity=0.303 Sum_probs=88.2
Q ss_pred hHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHH
Q 003650 539 SFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKM 618 (805)
Q Consensus 539 ~L~~Aa~~~~l~~~lv~~Ll~Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~i 618 (805)
.+.++..+|.+.+ +.+.+.+|.++|..- .|+||||+||-+|...++++|+..||+|+.+|+.|-|||.-|+..||.+|
T Consensus 5 ~~~W~vkNG~~De-Vk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c 82 (117)
T KOG4214|consen 5 SVAWNVKNGEIDE-VKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC 82 (117)
T ss_pred hHhhhhccCcHHH-HHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence 4567777788776 666666687777643 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 003650 619 VVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 650 (805)
Q Consensus 619 V~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~ 650 (805)
|++||+.||+-.. +.++|.+.+..+-
T Consensus 83 VklLL~~GAdrt~------~~PdG~~~~eate 108 (117)
T KOG4214|consen 83 VKLLLQNGADRTI------HAPDGTALIEATE 108 (117)
T ss_pred HHHHHHcCcccce------eCCCchhHHhhcc
Confidence 9999999999877 6688888776543
No 73
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.40 E-value=4.7e-13 Score=163.10 Aligned_cols=130 Identities=19% Similarity=0.134 Sum_probs=109.8
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccC--------------CCCChHHHHHHHcCCHHHHHHHHHCCCCCCc
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYD--------------VHGQGVIHLCAMLGYTWAILLFSWSGLSLDF 598 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D--------------~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~ 598 (805)
..+.||||.|+..++.+ ++++|++ |+++|.++ ..|.||||+|+..|+.+++++|++.|+|+|.
T Consensus 126 ~~G~TpLhlAa~~~~~e--iVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~ 203 (743)
T TIGR00870 126 TPGITALHLAAHRQNYE--IVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILT 203 (743)
T ss_pred CCCCcHHHHHHHhCCHH--HHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhh
Confidence 45889999999999987 8898888 99998653 3599999999999999999999999999999
Q ss_pred ccCCCCchhhHHHhcC---------CHHHHHHHHHcCCCCCCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcc
Q 003650 599 RDKYGWTALHWAAYYG---------REKMVVDLLSAGAKPNLVT-DPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (805)
Q Consensus 599 ~D~~G~TpLh~Aa~~G---------~~~iV~~LL~~GAd~n~~t-d~~~~d~~G~TpL~lA~~~g~~~iv~lLle~G 665 (805)
+|..|+||||+|+..+ ...+.+++++.++...... ..+..|.+|.||||+|+..|+.+++++|++.+
T Consensus 204 ~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~ 280 (743)
T TIGR00870 204 ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK 280 (743)
T ss_pred HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence 9999999999999987 3456677777766652200 00237899999999999999999999999964
No 74
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.37 E-value=2.1e-12 Score=133.39 Aligned_cols=124 Identities=24% Similarity=0.261 Sum_probs=108.9
Q ss_pred cccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCc-ccCCCCchhhHH
Q 003650 533 LPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF-RDKYGWTALHWA 610 (805)
Q Consensus 533 ~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~-~D~~G~TpLh~A 610 (805)
.++...+|+.+..+|+... .. .|+. --++|.+|..|+|+|..|+..|+.++|++||+.|+|||. ++..++||||+|
T Consensus 9 ld~~~~~Lle~i~Kndt~~-a~-~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFA 86 (396)
T KOG1710|consen 9 LDAPKSPLLEAIDKNDTEA-AL-ALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFA 86 (396)
T ss_pred ccchhhHHHHHHccCcHHH-HH-HHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHH
Confidence 3456789999999999875 33 3445 345999999999999999999999999999999999996 455699999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003650 611 AYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (805)
Q Consensus 611 a~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~ 664 (805)
|..|+.++.++|++.||.+.. .|.-|+|+..+|+.-|+.+||..+-.+
T Consensus 87 ALSGn~dvcrllldaGa~~~~------vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 87 ALSGNQDVCRLLLDAGARMYL------VNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred HHcCCchHHHHHHhccCcccc------ccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 999999999999999999998 779999999999999999999877443
No 75
>PHA02792 ankyrin-like protein; Provisional
Probab=99.37 E-value=2e-12 Score=150.36 Aligned_cols=132 Identities=14% Similarity=-0.007 Sum_probs=112.0
Q ss_pred hCCCCCCcccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHH-cCCHHHHHHHHHCCCCCC------
Q 003650 526 VGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAM-LGYTWAILLFSWSGLSLD------ 597 (805)
Q Consensus 526 l~~~~~~~~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~-~G~~~~v~~LL~~Gadvn------ 597 (805)
+...+..-.++.++++.-|..+.-.+ ++++|+. |+++|.++..|.||||+|+. .|+.+++++|++.||+++
T Consensus 61 ~~~~~~~n~~~~~~~~~~~s~n~~lE-lvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g 139 (631)
T PHA02792 61 LSSVDYKNINDFDIFEYLCSDNIDIE-LLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYG 139 (631)
T ss_pred HhCCCcCccCCccHHHHHHHhcccHH-HHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccC
Confidence 34444444567789987776555444 8888888 99999999999999999976 699999999999998743
Q ss_pred ------------------------------cccCCCCchhhHHHhcC-------CHHHHHHHHHcCCCCCCCCCCCCCCC
Q 003650 598 ------------------------------FRDKYGWTALHWAAYYG-------REKMVVDLLSAGAKPNLVTDPTSQNP 640 (805)
Q Consensus 598 ------------------------------~~D~~G~TpLh~Aa~~G-------~~~iV~~LL~~GAd~n~~td~~~~d~ 640 (805)
..|..|.||||+|+..+ +.+++++|+++|++++. +|.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~------~d~ 213 (631)
T PHA02792 140 YKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRY------YTY 213 (631)
T ss_pred cchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCc------cCC
Confidence 34567999999999999 89999999999999998 788
Q ss_pred CCCcHHHHHHHcC--CHHHHHHHHHc
Q 003650 641 GGLNAADIASKKG--FDGLAAFLSEQ 664 (805)
Q Consensus 641 ~G~TpL~lA~~~g--~~~iv~lLle~ 664 (805)
.|.||||+|+.+. ..+++++|+..
T Consensus 214 ~g~t~l~~~~~~~~i~~ei~~~L~~~ 239 (631)
T PHA02792 214 REHTTLYYYVDKCDIKREIFDALFDS 239 (631)
T ss_pred CCChHHHHHHHcccchHHHHHHHHhc
Confidence 9999999999999 78999999874
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.30 E-value=7.7e-12 Score=109.44 Aligned_cols=95 Identities=20% Similarity=0.137 Sum_probs=87.0
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 003650 572 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 651 (805)
Q Consensus 572 T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~ 651 (805)
--+.|+..+|..+-|+..+..|.+||..- .|+||||+||-+|..+++++|+..||+++. +|+.|-|||--|+.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~------kDKygITPLLsAvw 76 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQD------KDKYGITPLLSAVW 76 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCC------ccccCCcHHHHHHH
Confidence 34689999999999999999998888665 899999999999999999999999999998 99999999999999
Q ss_pred cCCHHHHHHHHHcccccCcccc
Q 003650 652 KGFDGLAAFLSEQALVAQFNDM 673 (805)
Q Consensus 652 ~g~~~iv~lLle~Ga~~~~~~~ 673 (805)
.||.+||++|+..|++......
T Consensus 77 EGH~~cVklLL~~GAdrt~~~P 98 (117)
T KOG4214|consen 77 EGHRDCVKLLLQNGADRTIHAP 98 (117)
T ss_pred HhhHHHHHHHHHcCcccceeCC
Confidence 9999999999999988765433
No 77
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.28 E-value=3.6e-11 Score=110.47 Aligned_cols=99 Identities=26% Similarity=0.321 Sum_probs=91.7
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCc
Q 003650 565 EYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLN 644 (805)
Q Consensus 565 ~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~T 644 (805)
..|..|.||||+|+..|+.++++.|+..|++++..|..|.||||+|+..+..+++++|+..|++++. .+..|.|
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~------~~~~~~~ 75 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA------RDKDGNT 75 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCC
Confidence 3567899999999999999999999999999999999999999999999999999999999998877 7789999
Q ss_pred HHHHHHHcCCHHHHHHHHHcccccC
Q 003650 645 AADIASKKGFDGLAAFLSEQALVAQ 669 (805)
Q Consensus 645 pL~lA~~~g~~~iv~lLle~Ga~~~ 669 (805)
|+|+|+..++.+++++|+..|.+..
T Consensus 76 ~l~~a~~~~~~~~~~~L~~~~~~~~ 100 (126)
T cd00204 76 PLHLAARNGNLDVVKLLLKHGADVN 100 (126)
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCc
Confidence 9999999999999999999984433
No 78
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.28 E-value=2.9e-12 Score=104.25 Aligned_cols=55 Identities=40% Similarity=0.643 Sum_probs=21.7
Q ss_pred HHHCC-CCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH
Q 003650 589 FSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 649 (805)
Q Consensus 589 LL~~G-advn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA 649 (805)
||++| +++|.+|..|.||||+||..|+.++|++|++.|+++++ +|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~------~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA------KDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC------CcCCCCCHHHhC
Confidence 34455 56666666666666666666666666666666666665 556666666655
No 79
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.27 E-value=7.9e-12 Score=100.69 Aligned_cols=54 Identities=31% Similarity=0.374 Sum_probs=40.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHH
Q 003650 570 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLL 623 (805)
Q Consensus 570 G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL 623 (805)
|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 678888888888888888888888888888888888888888888888888875
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.27 E-value=1.3e-11 Score=148.02 Aligned_cols=105 Identities=19% Similarity=0.143 Sum_probs=94.0
Q ss_pred chHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCH
Q 003650 538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 616 (805)
Q Consensus 538 t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~ 616 (805)
..|+.|+..|+.. .+++|++ |+++|.+|..|+||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.
T Consensus 84 ~~L~~aa~~G~~~--~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~ 161 (664)
T PTZ00322 84 VELCQLAASGDAV--GARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR 161 (664)
T ss_pred HHHHHHHHcCCHH--HHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH
Confidence 4688999999987 6777777 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-------CCCCCCCCCCCCCCCCCCcHHHHHH
Q 003650 617 KMVVDLLSA-------GAKPNLVTDPTSQNPGGLNAADIAS 650 (805)
Q Consensus 617 ~iV~~LL~~-------GAd~n~~td~~~~d~~G~TpL~lA~ 650 (805)
+++++|+.+ |++++. .+..|.+|+..+.
T Consensus 162 ~iv~~Ll~~~~~~~~~ga~~~~------~~~~g~~~~~~~~ 196 (664)
T PTZ00322 162 EVVQLLSRHSQCHFELGANAKP------DSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHHhCCCcccccCCCCCc------cccCCCCccchhh
Confidence 999999998 666665 6777877766554
No 81
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.24 E-value=2.6e-11 Score=140.82 Aligned_cols=122 Identities=19% Similarity=0.200 Sum_probs=111.2
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCCcc--------CC---------------CCChHHHHHHHcCCHHHHHHHH
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEY--------DV---------------HGQGVIHLCAMLGYTWAILLFS 590 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~--------D~---------------~G~T~LH~Aa~~G~~~~v~~LL 590 (805)
.|.++||.|..+.+.+ ++.+|++ |||++.+ +. .|..||-+||..+..+++++|+
T Consensus 183 ~GqSaLHiAIv~~~~~--~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAE--LVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred cCcchHHHHHHhccHH--HHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 4789999999999987 8888888 9998841 11 2678999999999999999999
Q ss_pred HCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCC--CCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003650 591 WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAK--PNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (805)
Q Consensus 591 ~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd--~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~ 664 (805)
++|||+|++|.+|+|.||..+.+-..++-.++|++|++ ..+ +|..|.|||.+|+..|..++.+.+++.
T Consensus 261 ~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v------~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 261 AHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV------RNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred hcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc------cccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 99999999999999999999999889999999999999 444 899999999999999999999999998
No 82
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.24 E-value=1.2e-11 Score=141.79 Aligned_cols=131 Identities=17% Similarity=0.150 Sum_probs=114.1
Q ss_pred chHHHHHHcCCcHHHHHHHHHc--C------------CCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCC
Q 003650 538 DSFFELTLKSKLKEWLLERVVE--G------------SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYG 603 (805)
Q Consensus 538 t~L~~Aa~~~~l~~~lv~~Ll~--G------------adin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G 603 (805)
+-|..|+..++.. .+.++++ + .++|..|..|.|+||.||..|+..++++|+++.+-++..|..|
T Consensus 5 qel~~a~ka~d~~--tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg 82 (854)
T KOG0507|consen 5 QELIDACKAGDYD--TVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKG 82 (854)
T ss_pred hhHHHhhhcccHH--HHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccC
Confidence 4567777777776 3444544 1 2467789999999999999999999999999999999999999
Q ss_pred CchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCccccccc
Q 003650 604 WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLA 676 (805)
Q Consensus 604 ~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l~ 676 (805)
.+|||+|++.|+.++|++|+..+..+|+ .+..|.||||+|+.+||.+++.+|+.+|+++-..+-...
T Consensus 83 ~~plhlaaw~g~~e~vkmll~q~d~~na------~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~ 149 (854)
T KOG0507|consen 83 ILPLHLAAWNGNLEIVKMLLLQTDILNA------VNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKE 149 (854)
T ss_pred cceEEehhhcCcchHHHHHHhcccCCCc------ccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccc
Confidence 9999999999999999999999988888 678999999999999999999999999998877665543
No 83
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.24 E-value=2.9e-11 Score=145.20 Aligned_cols=87 Identities=28% Similarity=0.343 Sum_probs=84.5
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHH
Q 003650 572 GVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASK 651 (805)
Q Consensus 572 T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~ 651 (805)
+.||.||..|+.++++.|+..|+++|.+|..|+||||+||..|+.+++++|+++|++++. +|..|.||||+|+.
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~------~d~~G~TpLh~A~~ 157 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL------LDKDGKTPLELAEE 157 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHH
Confidence 458999999999999999999999999999999999999999999999999999999998 88999999999999
Q ss_pred cCCHHHHHHHHHc
Q 003650 652 KGFDGLAAFLSEQ 664 (805)
Q Consensus 652 ~g~~~iv~lLle~ 664 (805)
.|+.+++++|+++
T Consensus 158 ~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 158 NGFREVVQLLSRH 170 (664)
T ss_pred CCcHHHHHHHHhC
Confidence 9999999999999
No 84
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.22 E-value=9e-12 Score=101.35 Aligned_cols=51 Identities=29% Similarity=0.398 Sum_probs=33.6
Q ss_pred C-CCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHH
Q 003650 560 G-SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (805)
Q Consensus 560 G-adin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~A 610 (805)
| +++|..|..|.||||+||..|+.+++++|+..|++++.+|..|+||||+|
T Consensus 5 ~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 5 GPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 5 88999999999999999999999999999999999999999999999997
No 85
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.17 E-value=7.6e-11 Score=137.07 Aligned_cols=127 Identities=20% Similarity=0.218 Sum_probs=107.2
Q ss_pred ccccchHHHHHHcCC--cHHHHHHHHHc--CCCCCc----cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcc------
Q 003650 534 PEAKDSFFELTLKSK--LKEWLLERVVE--GSKTTE----YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR------ 599 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~--l~~~lv~~Ll~--Gadin~----~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~------ 599 (805)
..|.|.||.|+.+.. ..+ ++..|++ ..-+|. -...|+||||+|..+.+.++|++|++.||||+++
T Consensus 141 a~GET~Lh~~lL~~~~~~n~-la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF 219 (782)
T KOG3676|consen 141 ATGETLLHKALLNLSDGHNE-LARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFF 219 (782)
T ss_pred chhhhHHHHHHhcCchhHHH-HHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcccc
Confidence 458899999998543 223 5666665 322332 2347999999999999999999999999999985
Q ss_pred ---c--------------CCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 003650 600 ---D--------------KYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 662 (805)
Q Consensus 600 ---D--------------~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLl 662 (805)
| ..|..||.+||..++.+|+++|+++|||+++ +|..|+|.||+.+..-..++-.+++
T Consensus 220 ~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~a------qDS~GNTVLH~lVi~~~~~My~~~L 293 (782)
T KOG3676|consen 220 CPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNA------QDSNGNTVLHMLVIHFVTEMYDLAL 293 (782)
T ss_pred CcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCc------cccCCChHHHHHHHHHHHHHHHHHH
Confidence 1 1478999999999999999999999999999 9999999999999998899999999
Q ss_pred Hcccc
Q 003650 663 EQALV 667 (805)
Q Consensus 663 e~Ga~ 667 (805)
++|++
T Consensus 294 ~~ga~ 298 (782)
T KOG3676|consen 294 ELGAN 298 (782)
T ss_pred hcCCC
Confidence 99988
No 86
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.14 E-value=7.7e-11 Score=94.92 Aligned_cols=54 Identities=39% Similarity=0.510 Sum_probs=46.4
Q ss_pred CCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 003650 603 GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLS 662 (805)
Q Consensus 603 G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLl 662 (805)
|+||||+||..|+.+++++|++.|++++. +|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~------~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINA------QDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHccCHHHHHHHC
Confidence 78999999999999999999999999998 7899999999999999999999986
No 87
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.14 E-value=5.4e-10 Score=113.09 Aligned_cols=106 Identities=26% Similarity=0.269 Sum_probs=96.4
Q ss_pred CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCC-----HHHHHHHHHcCC---CCCC
Q 003650 560 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGR-----EKMVVDLLSAGA---KPNL 631 (805)
Q Consensus 560 Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~-----~~iV~~LL~~GA---d~n~ 631 (805)
....+..+..+.+++|.++..+...++.+|+..|++++.+|..|.||||+|+..|+ .+++++|++.|+ +.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~ 142 (235)
T COG0666 63 DRHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNL 142 (235)
T ss_pred ccccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccc
Confidence 33445577789999999999999999999999999999999999999999999999 999999999999 4444
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcc
Q 003650 632 VTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFN 671 (805)
Q Consensus 632 ~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~ 671 (805)
+|..|.||||+|+..|+.+++++|++.|++....
T Consensus 143 ------~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~ 176 (235)
T COG0666 143 ------RDEDGNTPLHWAALNGDADIVELLLEAGADPNSR 176 (235)
T ss_pred ------cCCCCCchhHHHHHcCchHHHHHHHhcCCCCccc
Confidence 7899999999999999999999999999877665
No 88
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=2.8e-10 Score=125.68 Aligned_cols=90 Identities=20% Similarity=0.130 Sum_probs=84.1
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHc
Q 003650 573 VIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKK 652 (805)
Q Consensus 573 ~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~ 652 (805)
.|.-|+..|..++|+-.+..--|+...+..|.||||-|+..||.+||++||+.|+++|+ .|.+|+||||+|+.+
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa------~DSdGWTPLHCAASC 626 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA------ADSDGWTPLHCAASC 626 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC------ccCCCCchhhhhhhc
Confidence 34558889999999999988889999999999999999999999999999999999999 899999999999999
Q ss_pred CCHHHHHHHHHccccc
Q 003650 653 GFDGLAAFLSEQALVA 668 (805)
Q Consensus 653 g~~~iv~lLle~Ga~~ 668 (805)
++..+++.|+++|+..
T Consensus 627 Nnv~~ckqLVe~Gaav 642 (752)
T KOG0515|consen 627 NNVPMCKQLVESGAAV 642 (752)
T ss_pred CchHHHHHHHhccceE
Confidence 9999999999999654
No 89
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.04 E-value=3.8e-10 Score=132.55 Aligned_cols=249 Identities=17% Similarity=0.178 Sum_probs=161.4
Q ss_pred CCcEEEEcCCeecceeeccccceeeeCCCC--CCCeeEEEEEeCCCCccccccccccCCC-CcccCCCCccccchhhHHH
Q 003650 398 KSNMFCVCGEVRVPAEFVQAGVYRCFLPPH--SPGLFLLYMSLDGHKPISQVLNFEYRSP-QLHAPVASSEDKSKWEEFQ 474 (805)
Q Consensus 398 ~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph--~~G~V~l~v~~~n~~~~se~~~Feyr~~-~~~~~~~~~~~~~~~~el~ 474 (805)
.....|--|+.+..--+|..|.- =.| ..|.||+-++...++ +.+++.--+.. .+....+.+.| +.+.
T Consensus 760 ~LT~acaggh~e~vellv~rgan----iehrdkkgf~plImaatagh--~tvV~~llk~ha~veaQsdrtkd----t~lS 829 (2131)
T KOG4369|consen 760 NLTSACAGGHREEVELLVVRGAN----IEHRDKKGFVPLIMAATAGH--ITVVQDLLKAHADVEAQSDRTKD----TMLS 829 (2131)
T ss_pred cccccccCccHHHHHHHHHhccc----ccccccccchhhhhhcccCc--hHHHHHHHhhhhhhhhhcccccC----ceEE
Confidence 45577888888766666666642 134 789999999886665 22222222110 01110000000 1111
Q ss_pred H-----HHHHHHHHhccccccccccCCCCCCchHHHhhhhhhhhcccCCHHHHHHHhCCCC--CC----cccccchHHHH
Q 003650 475 V-----QMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWAYLFKSVGDKR--TS----LPEAKDSFFEL 543 (805)
Q Consensus 475 l-----~~Rl~~ll~~~~~~lqil~~k~~~~~l~d~~~~a~~i~~~~~~~~~li~~l~~~~--~~----~~~~~t~L~~A 543 (805)
+ -.|.+++|..-. -.|. ..+..+...+-.+..++...+++.+...+ +. ..-+-.||+.|
T Consensus 830 lacsggr~~vvelLl~~g------anke----hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmla 899 (2131)
T KOG4369|consen 830 LACSGGRTRVVELLLNAG------ANKE----HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLA 899 (2131)
T ss_pred EecCCCcchHHHHHHHhh------cccc----ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhh
Confidence 1 135555552211 0111 12233344445555688899999875554 22 33466899999
Q ss_pred HHcCCcHHHHHHHHHc-CCCCCc-cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHH
Q 003650 544 TLKSKLKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVD 621 (805)
Q Consensus 544 a~~~~l~~~lv~~Ll~-Gadin~-~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~ 621 (805)
.+.|+-.. ...|++ |.|+|. ...+-+|+|-+|+..|+.++|.+||.+.+++..+-..|.|||+-+|..|..++-++
T Consensus 900 tmngh~~a--t~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~ 977 (2131)
T KOG4369|consen 900 TMNGHQAA--TLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNL 977 (2131)
T ss_pred hhccccHH--HHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchh
Confidence 99999873 455566 999998 45567899999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCC-----------------------------CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHccccc
Q 003650 622 LLSAGAKPNLVT-----------------------------DPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVA 668 (805)
Q Consensus 622 LL~~GAd~n~~t-----------------------------d~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~ 668 (805)
||..|||+|+.. ....+|..|+|+|-+|+..|+...+.+|++++++.
T Consensus 978 li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~ 1053 (2131)
T KOG4369|consen 978 LIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADA 1053 (2131)
T ss_pred hhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccCh
Confidence 999999999852 11224455556665555555555555555555544
No 90
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=99.01 E-value=7.6e-10 Score=96.78 Aligned_cols=83 Identities=23% Similarity=0.297 Sum_probs=73.9
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeeccee-eccccceeeeCCCCCCCeeEEEEEeCCCCcc
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAE-FVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 444 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~-~~~~gvLrC~~Pph~~G~V~l~v~~~n~~~~ 444 (805)
.|++|+|.|++..||++|+|.|.+|.. ....+.|+||+...+.. .+++..|+|.+|++.+|.+++.|..++...+
T Consensus 2 ~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~~ 77 (85)
T PF01833_consen 2 VITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQIY 77 (85)
T ss_dssp EEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEEE
T ss_pred EEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCeE
Confidence 699999999999999999999998822 36679999999999999 9999999999999999999999999986778
Q ss_pred cccccccc
Q 003650 445 SQVLNFEY 452 (805)
Q Consensus 445 se~~~Fey 452 (805)
++...|+|
T Consensus 78 ~~~~~F~Y 85 (85)
T PF01833_consen 78 SNNTSFTY 85 (85)
T ss_dssp EEEEEEEE
T ss_pred ECCeeeEC
Confidence 88888887
No 91
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.99 E-value=1.2e-09 Score=130.14 Aligned_cols=257 Identities=17% Similarity=0.152 Sum_probs=146.5
Q ss_pred ccchHHHHHHcCCcHHHHHHHH-HcCCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCc------ccCCCCchhh
Q 003650 536 AKDSFFELTLKSKLKEWLLERV-VEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDF------RDKYGWTALH 608 (805)
Q Consensus 536 ~~t~L~~Aa~~~~l~~~lv~~L-l~Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~------~D~~G~TpLh 608 (805)
+..-+|. |..+++. |.+.++ ..|..++.+|..||||||||+..|+..++..|+..|++.++ .+..|.|+--
T Consensus 608 ~qgV~hf-ca~lg~e-wA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~ 685 (975)
T KOG0520|consen 608 GQGVIHF-CAALGYE-WAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAAD 685 (975)
T ss_pred CCChhhH-hhhcCCc-eeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhh
Confidence 4455666 5555544 333332 33899999999999999999999999999999988865543 3457999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCccccccccccccccccc
Q 003650 609 WAAYYGREKMVVDLLSAGAKPNL--VTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAGNISGSLQTG 686 (805)
Q Consensus 609 ~Aa~~G~~~iV~~LL~~GAd~n~--~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l~~~i~~~~~~~ 686 (805)
.|...|+..+..+|-+....... .+... .+..+.+|..-|.... .+......-....|.+++.+...+.
T Consensus 686 la~s~g~~gia~~lse~~L~~~~~~~~~~~-~~~s~~~~~~~~~~t~--------~e~s~~~~~~~~sl~Dtl~avrdAa 756 (975)
T KOG0520|consen 686 LARANGHKGIAGYLSEKALSAHLSNLELAD-PNLSADSEEDKAEKTS--------SEGSPNPDEDSDSLKDTLAAVRDAA 756 (975)
T ss_pred hhhcccccchHHHHhhhHHHHHHhhccccc-cccCCCchhhhhhhcc--------CCCCCCCCccccccccccccccchH
Confidence 99999999999988765211110 00000 1223455555444331 1111010000001222111111111
Q ss_pred cchhhcccCCc----------------c------hhhhhhhh----HHHHHhHHHHHHHHHHHHhhhhHHHHHHH-----
Q 003650 687 STITVDTQNLT----------------E------DEVYLKDT----LSAYRTAAEAAARIQAAFREHSLKVQTKA----- 735 (805)
Q Consensus 687 ~~~~~~~~~~~----------------~------~~~slkd~----LaA~r~Aa~aA~~iQ~afR~~s~r~R~q~----- 735 (805)
..+......+. . ...+++.. +-..|.-..||.+||.-||.|..++-+.-
T Consensus 757 ~aa~r~q~vfr~~~~~~~~a~~i~~~~~~~i~~~~~~~m~~~~a~~~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~ 836 (975)
T KOG0520|consen 757 QAAARIQAVFRAQSFQKKQAREIMDATKEQISEELAVSMKASSAFSMCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPI 836 (975)
T ss_pred HHHHhhhhhhhhhhhhhhhHHHHHhhcchhhhhhhhhhhhcccchhcCccccchhHHHHhhhhhhhHHhhhhhcccCCcc
Confidence 11100000000 0 00000000 00112234577888888888776542221
Q ss_pred --hhcCC--------------cHHHH-HHHHHHHHHHHHHhhHHHHHH----HHHHHHHHHHhhhHHHH--HHHHHHHHH
Q 003650 736 --IRFSS--------------PEEEA-QNIIAALKIQHAFRNFEVRKK----MAAAARIQHRFRSWKVR--KEFLNMRRQ 792 (805)
Q Consensus 736 --~~~~~--------------~~~~a-~~l~Aa~~iq~~~r~~~~~~~----~~AAv~IQ~~~Rg~~~R--k~f~~~r~~ 792 (805)
++... +.... ..+.++.+++.+||+|+.+.+ ..||+.||..||-+|.- .-|.+|-++
T Consensus 837 v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A 916 (975)
T KOG0520|consen 837 VKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLTRA 916 (975)
T ss_pred ccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 22222 345688899999999977764 35889999999999987 777888899
Q ss_pred HHHHHHhhhhc
Q 003650 793 AIKIQVILLCI 803 (805)
Q Consensus 793 ~v~IQ~~~Rg~ 803 (805)
+++||+.+|-+
T Consensus 917 ~~~VQsm~rs~ 927 (975)
T KOG0520|consen 917 VVRVQSMFRSP 927 (975)
T ss_pred HHHHHHHhcCH
Confidence 99999998854
No 92
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.98 E-value=3.3e-10 Score=133.07 Aligned_cols=123 Identities=20% Similarity=0.187 Sum_probs=79.2
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcc-cCCCCchhhHHHh
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFR-DKYGWTALHWAAY 612 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~-D~~G~TpLh~Aa~ 612 (805)
+-.|+|..||..|+-+ ++++|+. |+++..+|+.|.+||.+|+-.||..+|+.|+++-++++.+ |+.+.|+|.+||.
T Consensus 756 n~~t~LT~acaggh~e--~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs 833 (2131)
T KOG4369|consen 756 NIKTNLTSACAGGHRE--EVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS 833 (2131)
T ss_pred cccccccccccCccHH--HHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC
Confidence 3456677777766655 4666555 7777777777777777777777777777777666666653 4556666666666
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcc
Q 003650 613 YGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (805)
Q Consensus 613 ~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~G 665 (805)
.|+.++|++||.+||+-.. ++-...|||.+|...|+.+|+.+|+.+|
T Consensus 834 ggr~~vvelLl~~gankeh------rnvsDytPlsla~Sggy~~iI~~llS~G 880 (2131)
T KOG4369|consen 834 GGRTRVVELLLNAGANKEH------RNVSDYTPLSLARSGGYTKIIHALLSSG 880 (2131)
T ss_pred CCcchHHHHHHHhhccccc------cchhhcCchhhhcCcchHHHHHHHhhcc
Confidence 6666666666666666544 4455555555555555555555555555
No 93
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.97 E-value=2.5e-09 Score=94.70 Aligned_cols=82 Identities=27% Similarity=0.387 Sum_probs=69.8
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeecceeeccccceeeeCCCC-CCCeeEEEEEeCCCCcc
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHKPI 444 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph-~~G~V~l~v~~~n~~~~ 444 (805)
.|++|+|..|+..|||+|+|.|.+|.. .....|+||+.+....-+.+..|.|.+|++ ..|.++|.|.-++.. .
T Consensus 2 ~I~~i~P~~Gp~~GGT~vtI~G~~~~~-----~~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~~-~ 75 (85)
T cd01179 2 SITSLSPSYGPQSGGTRLTITGKHLNA-----GSSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGAR-R 75 (85)
T ss_pred eeeEEcCCCCCCCCCEEEEEEEECCCC-----CCeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCcc-c
Confidence 699999999999999999999999865 344899999998777767899999999998 678999999988763 4
Q ss_pred ccccccccC
Q 003650 445 SQVLNFEYR 453 (805)
Q Consensus 445 se~~~Feyr 453 (805)
+....|+|.
T Consensus 76 ~~~~~F~Y~ 84 (85)
T cd01179 76 LAPLVFTYT 84 (85)
T ss_pred CCCccEEEe
Confidence 445788885
No 94
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=98.88 E-value=8e-09 Score=91.36 Aligned_cols=83 Identities=24% Similarity=0.261 Sum_probs=69.6
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEc-CCeecceeeccccceeeeCCCCCC---CeeEEEEEeCCC
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVC-GEVRVPAEFVQAGVYRCFLPPHSP---GLFLLYMSLDGH 441 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~F-G~v~Vpa~~~~~gvLrC~~Pph~~---G~V~l~v~~~n~ 441 (805)
.|+.|+|.+|+..||++|+|.|.+|... ..+.|+| |+.......+.+..|.|.+|++.. |.|.+.+...+.
T Consensus 2 ~I~~i~P~~g~~~GGt~itI~G~~f~~~-----~~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (89)
T cd00102 2 VITSISPSSGPVSGGTEVTITGSNFGSG-----SNLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGNG 76 (89)
T ss_pred EEeEEECCcCCCCCCeEEEEEEECCCCC-----CcEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCCC
Confidence 6999999999999999999999998652 2699999 898877777799999999999843 888888876653
Q ss_pred CccccccccccC
Q 003650 442 KPISQVLNFEYR 453 (805)
Q Consensus 442 ~~~se~~~Feyr 453 (805)
...+....|+|.
T Consensus 77 ~~~~~~~~F~Y~ 88 (89)
T cd00102 77 GITSSPLTFTYV 88 (89)
T ss_pred cccCCCccEEee
Confidence 356777888885
No 95
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.82 E-value=1.3e-08 Score=111.90 Aligned_cols=97 Identities=27% Similarity=0.220 Sum_probs=87.6
Q ss_pred CCccCCCCChH------HHHHHHcCCHHHHHHHHHCCCCCCcccCC-CCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCC
Q 003650 563 TTEYDVHGQGV------IHLCAMLGYTWAILLFSWSGLSLDFRDKY-GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDP 635 (805)
Q Consensus 563 in~~D~~G~T~------LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~-G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~ 635 (805)
...+|.+|.|. ||-.++.|+.++.--||..||++|..+.. |.||||.|+..|...-+++|+-+|||+++
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a---- 195 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA---- 195 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC----
Confidence 45577777665 89999999999999999999999998875 99999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHcc
Q 003650 636 TSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (805)
Q Consensus 636 ~~~d~~G~TpL~lA~~~g~~~iv~lLle~G 665 (805)
.|.+|.||+++|...||.++++-|++.-
T Consensus 196 --~d~~GmtP~~~AR~~gH~~laeRl~e~~ 223 (669)
T KOG0818|consen 196 --QDSSGMTPVDYARQGGHHELAERLVEIQ 223 (669)
T ss_pred --CCCCCCcHHHHHHhcCchHHHHHHHHHH
Confidence 8999999999999999999998887754
No 96
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.79 E-value=1.4e-08 Score=105.59 Aligned_cols=87 Identities=21% Similarity=0.249 Sum_probs=82.2
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCc-cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHH
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTE-YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~-~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa 611 (805)
+.|.++|.+|+.+|++. ++++|++ |+|+|. .+..+.||||+||..|+.++..+|++.|+.+...+.-|+|+-.+||
T Consensus 43 ~sGMs~LahAaykGnl~--~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAA 120 (396)
T KOG1710|consen 43 PSGMSVLAHAAYKGNLT--LVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAA 120 (396)
T ss_pred CCcccHHHHHHhcCcHH--HHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHH
Confidence 45789999999999998 8999999 999998 7788999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHH
Q 003650 612 YYGREKMVVDL 622 (805)
Q Consensus 612 ~~G~~~iV~~L 622 (805)
.-|+.+||..+
T Consensus 121 FVG~H~CV~iI 131 (396)
T KOG1710|consen 121 FVGHHECVAII 131 (396)
T ss_pred HhcchHHHHHH
Confidence 99999999865
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.70 E-value=7.2e-09 Score=119.57 Aligned_cols=83 Identities=25% Similarity=0.360 Sum_probs=79.0
Q ss_pred CCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCC-CCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 003650 563 TTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKY-GWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPG 641 (805)
Q Consensus 563 in~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~-G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~ 641 (805)
.|.+|..|+|+||+|+..|...++++||.+|++++.+|.. ||||||-|.++|+.+|+-+||.+|+...+ +|.+
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i------~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI------KDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE------eccc
Confidence 6779999999999999999999999999999999999986 99999999999999999999999999988 8999
Q ss_pred CCcHHHHHHH
Q 003650 642 GLNAADIASK 651 (805)
Q Consensus 642 G~TpL~lA~~ 651 (805)
|..||+.-++
T Consensus 119 glsplq~~~r 128 (1267)
T KOG0783|consen 119 GLSPLQFLSR 128 (1267)
T ss_pred CCCHHHHHhh
Confidence 9999997765
No 98
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.66 E-value=6.4e-08 Score=107.69 Aligned_cols=121 Identities=26% Similarity=0.275 Sum_probs=108.5
Q ss_pred chHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCC--CCcccCCCCchhhHHHhcCC
Q 003650 538 DSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS--LDFRDKYGWTALHWAAYYGR 615 (805)
Q Consensus 538 t~L~~Aa~~~~l~~~lv~~Ll~Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gad--vn~~D~~G~TpLh~Aa~~G~ 615 (805)
..++.|+..+++.. +.+.-+.|.++-.++.+-.|.||+|+..|+-++|++||.+|.. ++..|..|.|+||-|+..++
T Consensus 868 eeil~av~~~D~~k-lqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 868 EEILRAVLSSDLMK-LQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHHHhccHHH-HHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence 34788999999776 6666666888888999999999999999999999999999854 67788999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcc
Q 003650 616 EKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (805)
Q Consensus 616 ~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~G 665 (805)
..+..+|++.||.... .|..|.||-.-|...|..+++.||....
T Consensus 947 r~vc~~lvdagasl~k------td~kg~tp~eraqqa~d~dlaayle~rq 990 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRK------TDSKGKTPQERAQQAGDPDLAAYLESRQ 990 (1004)
T ss_pred hHHHHHHHhcchhhee------cccCCCChHHHHHhcCCchHHHHHhhhh
Confidence 9999999999999987 7899999999999999999999997654
No 99
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.60 E-value=4.7e-08 Score=107.39 Aligned_cols=94 Identities=24% Similarity=0.221 Sum_probs=83.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCcH
Q 003650 567 DVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS-AGAKPNLVTDPTSQNPGGLNA 645 (805)
Q Consensus 567 D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~-~GAd~n~~td~~~~d~~G~Tp 645 (805)
+.++.-.+++||..|....++-+.-.|.|++.+|.+.+|+||.||..||.+++++||+ .+.+++. +|..|+||
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~------kDRw~rtP 576 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDP------KDRWGRTP 576 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCCh------hhccCCCc
Confidence 3456778999999999999998888899999999999999999999999999999997 5677766 89999999
Q ss_pred HHHHHHcCCHHHHHHHHHccc
Q 003650 646 ADIASKKGFDGLAAFLSEQAL 666 (805)
Q Consensus 646 L~lA~~~g~~~iv~lLle~Ga 666 (805)
|+-|...+|.+++++|-+.--
T Consensus 577 lDdA~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 577 LDDAKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred chHhHhcCcHHHHHHHHHHhc
Confidence 999999999999999987763
No 100
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.57 E-value=2.9e-07 Score=81.96 Aligned_cols=84 Identities=19% Similarity=0.196 Sum_probs=63.8
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeecceeeccccceeeeCCCC-CC--CeeEEEEEeCCC-
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SP--GLFLLYMSLDGH- 441 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph-~~--G~V~l~v~~~n~- 441 (805)
.|+.|+|.+|+..|||.|+|.|.+|... .....|.||+.+....-+.+..|.|.+|+. .+ +.|.+.+...+.
T Consensus 2 ~I~~i~P~~g~~~Ggt~vtI~G~~f~~~----~~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~~ 77 (90)
T cd00603 2 VITSISPSSGPLSGGTRLTITGSNLGSG----SPRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANVS 77 (90)
T ss_pred eEEEEcCCCCCCCCCeEEEEEEECCCCC----CceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCcccc
Confidence 6999999999999999999999988652 247899999998777777899999999998 43 445555543321
Q ss_pred CccccccccccC
Q 003650 442 KPISQVLNFEYR 453 (805)
Q Consensus 442 ~~~se~~~Feyr 453 (805)
...+....|+|.
T Consensus 78 ~~~~~~~~F~Y~ 89 (90)
T cd00603 78 ARVLSNTTFTYV 89 (90)
T ss_pred ccccCCcceEEe
Confidence 124555667774
No 101
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.54 E-value=8e-08 Score=105.61 Aligned_cols=94 Identities=17% Similarity=0.157 Sum_probs=85.3
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCChHHHHHHHcCCHHHHHHHH-HCCCCCCcccCCCCchhhHHHhc
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFS-WSGLSLDFRDKYGWTALHWAAYY 613 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL-~~Gadvn~~D~~G~TpLh~Aa~~ 613 (805)
+...++++|+..|++.. +..+++.|.|++.+|.+.+|+||.||..|+.+++++|| ..+++++.+|.+|+|||.-|..+
T Consensus 505 ~~~i~~~~aa~~GD~~a-lrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F 583 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSA-LRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF 583 (622)
T ss_pred cchhhhhhhhhcCCHHH-HHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence 45568999999999986 77888889999999999999999999999999999999 57899999999999999999999
Q ss_pred CCHHHHHHHHHcCCCC
Q 003650 614 GREKMVVDLLSAGAKP 629 (805)
Q Consensus 614 G~~~iV~~LL~~GAd~ 629 (805)
+|.+++++|-++-...
T Consensus 584 ~h~~v~k~L~~~~~~y 599 (622)
T KOG0506|consen 584 KHKEVVKLLEEAQYPY 599 (622)
T ss_pred CcHHHHHHHHHHhccc
Confidence 9999999998765433
No 102
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.48 E-value=2.7e-07 Score=103.56 Aligned_cols=93 Identities=25% Similarity=0.349 Sum_probs=68.7
Q ss_pred chHHHHHHcCCcHHHHHHHHHcCC--CCCc--cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhc
Q 003650 538 DSFFELTLKSKLKEWLLERVVEGS--KTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYY 613 (805)
Q Consensus 538 t~L~~Aa~~~~l~~~lv~~Ll~Ga--din~--~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~ 613 (805)
..|+.|....++.. ++-+|..|. .+|. -+.+|+|+||+||..|+..+.++|+++|+|+-.+|..|+|||.||-..
T Consensus 626 qqLl~A~~~~Dl~t-~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a 704 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQT-AILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQA 704 (749)
T ss_pred HHHHHHHHHHHHHH-HHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhc
Confidence 45677777777663 333333343 3333 456678888888888888888888888888888888888888888888
Q ss_pred CCHHHHHHHHHcCCCCCC
Q 003650 614 GREKMVVDLLSAGAKPNL 631 (805)
Q Consensus 614 G~~~iV~~LL~~GAd~n~ 631 (805)
|..+|+.+||.+|+....
T Consensus 705 ~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 705 GSQECIDVLLQYGCPDEC 722 (749)
T ss_pred ccHHHHHHHHHcCCCccc
Confidence 888888888888876543
No 103
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.46 E-value=7.2e-07 Score=80.54 Aligned_cols=86 Identities=14% Similarity=0.070 Sum_probs=64.8
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeecce---eeccccceeeeCCCCC-C-CeeEEEEEeCC
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPA---EFVQAGVYRCFLPPHS-P-GLFLLYMSLDG 440 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa---~~~~~gvLrC~~Pph~-~-G~V~l~v~~~n 440 (805)
.|++|+|..|+..|||+|+|.|.+|..... .....+++|+.+-.- .......|+|.+||+. + +..++.|.-++
T Consensus 2 ~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~--~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~~ 79 (94)
T cd01180 2 VITEFFPLSGPLEGGTRLTICGSNLGLRKN--DVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVGH 79 (94)
T ss_pred eeEEEeCCCCCCCCCEEEEEEEEcCCCCcc--cceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEECC
Confidence 599999999999999999999999876321 245789999985222 2566778999999984 3 67777777766
Q ss_pred CC-ccccccccccC
Q 003650 441 HK-PISQVLNFEYR 453 (805)
Q Consensus 441 ~~-~~se~~~Feyr 453 (805)
.. .++....|.|.
T Consensus 80 ~~~~~~~~~~F~Y~ 93 (94)
T cd01180 80 GSFRTESSEGFSFV 93 (94)
T ss_pred ceecccccCceEEe
Confidence 53 35556778775
No 104
>PF13606 Ank_3: Ankyrin repeat
Probab=98.46 E-value=1.7e-07 Score=66.30 Aligned_cols=29 Identities=45% Similarity=0.471 Sum_probs=20.4
Q ss_pred CCCchhhHHHhcCCHHHHHHHHHcCCCCC
Q 003650 602 YGWTALHWAAYYGREKMVVDLLSAGAKPN 630 (805)
Q Consensus 602 ~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n 630 (805)
+|+||||+||..|+.++|++||++|+|+|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 46777777777777777777777777665
No 105
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.44 E-value=4.1e-07 Score=100.45 Aligned_cols=88 Identities=17% Similarity=0.240 Sum_probs=76.7
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCCccC-CCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcC
Q 003650 536 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYD-VHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYG 614 (805)
Q Consensus 536 ~~t~L~~Aa~~~~l~~~lv~~Ll~Gadin~~D-~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G 614 (805)
-.-.||-.+..++++. .+.+|..|+++|..+ ..|.||||.||..|..--+++|+-+|||+++.|.+|.||+.+|-..|
T Consensus 133 LsrQLhasvRt~nlet-~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~g 211 (669)
T KOG0818|consen 133 LSKQLHSSVRTGNLET-CLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGG 211 (669)
T ss_pred HHHHHHHHhhcccHHH-HHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcC
Confidence 3457888888888875 566666699999955 57999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHH
Q 003650 615 REKMVVDLLS 624 (805)
Q Consensus 615 ~~~iV~~LL~ 624 (805)
|.++++-|++
T Consensus 212 H~~laeRl~e 221 (669)
T KOG0818|consen 212 HHELAERLVE 221 (669)
T ss_pred chHHHHHHHH
Confidence 9988887765
No 106
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.43 E-value=6.4e-07 Score=79.72 Aligned_cols=83 Identities=25% Similarity=0.296 Sum_probs=62.9
Q ss_pred eeeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeecceeec--cccceeeeCCCC--CCCeeEE-EEEeC
Q 003650 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFV--QAGVYRCFLPPH--SPGLFLL-YMSLD 439 (805)
Q Consensus 365 f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~~~--~~gvLrC~~Pph--~~G~V~l-~v~~~ 439 (805)
..|+.|+|.+|+..||++|+|+|.+|.. .....|.|+...++..++ .+..|+|.+|+. .++.+++ .+...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~-----~~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDS-----ISVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCc-----ceEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 4699999999999999999999999876 455778887756666664 578999999987 4677777 66665
Q ss_pred CCCcccccccccc
Q 003650 440 GHKPISQVLNFEY 452 (805)
Q Consensus 440 n~~~~se~~~Fey 452 (805)
+...-++...|+|
T Consensus 77 ~~~~~~~~~~f~y 89 (90)
T smart00429 77 NGGVPSSPQPFTY 89 (90)
T ss_pred CCCccCcccCeEE
Confidence 5543343345665
No 107
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.33 E-value=9.5e-07 Score=99.01 Aligned_cols=87 Identities=20% Similarity=0.314 Sum_probs=73.5
Q ss_pred chHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCH
Q 003650 538 DSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGRE 616 (805)
Q Consensus 538 t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~ 616 (805)
-++|.++...+....-.+++.+ +..++..|..|.||||+|+..|+...++.|+.+|+++-.+++.||+|||-|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 3578888777766522223333 668888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 003650 617 KMVVDLLS 624 (805)
Q Consensus 617 ~iV~~LL~ 624 (805)
.++..+|.
T Consensus 102 q~i~~vlr 109 (560)
T KOG0522|consen 102 QIITEVLR 109 (560)
T ss_pred HHHHHHHH
Confidence 88877664
No 108
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.29 E-value=1.6e-06 Score=97.59 Aligned_cols=91 Identities=19% Similarity=0.111 Sum_probs=77.6
Q ss_pred HHHHHHcCCHHHHHHHHHCCCC--CC--cccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH
Q 003650 574 IHLCAMLGYTWAILLFSWSGLS--LD--FRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 649 (805)
Q Consensus 574 LH~Aa~~G~~~~v~~LL~~Gad--vn--~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA 649 (805)
|..|........+-+||.+|.. +| ..+.+|+||||+||..|+..+.++|+=+|+|+.+ +|..|+|||.||
T Consensus 628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~------rda~g~t~l~ya 701 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA------RDAHGRTALFYA 701 (749)
T ss_pred HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee------cccCCchhhhhH
Confidence 4445565667777888888843 33 3466789999999999999999999999999998 899999999999
Q ss_pred HHcCCHHHHHHHHHcccccCc
Q 003650 650 SKKGFDGLAAFLSEQALVAQF 670 (805)
Q Consensus 650 ~~~g~~~iv~lLle~Ga~~~~ 670 (805)
...|..+|+.+|+.+|+.+..
T Consensus 702 r~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 702 RQAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred hhcccHHHHHHHHHcCCCccc
Confidence 999999999999999976654
No 109
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.27 E-value=9.6e-07 Score=63.69 Aligned_cols=30 Identities=43% Similarity=0.474 Sum_probs=18.9
Q ss_pred CCCchhhHHHhcCCHHHHHHHHHcCCCCCC
Q 003650 602 YGWTALHWAAYYGREKMVVDLLSAGAKPNL 631 (805)
Q Consensus 602 ~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~ 631 (805)
+|+||||+|+..|+.+++++|+++|++++.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~ 30 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINA 30 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCC
Confidence 356666666666666666666666666655
No 110
>PF13606 Ank_3: Ankyrin repeat
Probab=98.26 E-value=1e-06 Score=62.27 Aligned_cols=30 Identities=20% Similarity=0.229 Sum_probs=28.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCc
Q 003650 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLDF 598 (805)
Q Consensus 569 ~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~ 598 (805)
+|+||||+||..|+.++|++||++|+|||.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 111
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.26 E-value=1.2e-06 Score=63.16 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=31.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCCcccC
Q 003650 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK 601 (805)
Q Consensus 569 ~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~ 601 (805)
+|+||||+||..|+.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999999874
No 112
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.19 E-value=3.1e-06 Score=94.96 Aligned_cols=87 Identities=24% Similarity=0.242 Sum_probs=74.3
Q ss_pred hHHHHHHHcCCHHHHHH-HH-HCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHH
Q 003650 572 GVIHLCAMLGYTWAILL-FS-WSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIA 649 (805)
Q Consensus 572 T~LH~Aa~~G~~~~v~~-LL-~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA 649 (805)
-|||+++.....+-+.. |. +.+..|+.+|..|.||||+|+..||...++.|+.+||++.+ +|..|++|||-|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~------kN~~gWs~L~EA 95 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI------KNNEGWSPLHEA 95 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc------cccccccHHHHH
Confidence 45999998876655443 33 55678999999999999999999999999999999999998 999999999999
Q ss_pred HHcCCHHHHHHHHHc
Q 003650 650 SKKGFDGLAAFLSEQ 664 (805)
Q Consensus 650 ~~~g~~~iv~lLle~ 664 (805)
+..|+..++.-++.+
T Consensus 96 v~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 96 VSTGNEQIITEVLRH 110 (560)
T ss_pred HHcCCHHHHHHHHHH
Confidence 999999877666543
No 113
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.10 E-value=8.5e-06 Score=74.29 Aligned_cols=59 Identities=24% Similarity=0.409 Sum_probs=49.9
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCee-cceeeccccceeeeCCCC
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVR-VPAEFVQAGVYRCFLPPH 427 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~-Vpa~~~~~gvLrC~~Pph 427 (805)
+|++|+|.||+..|||.|+|+|.+|... ....+.++||+.. ++-.+.++..++|.+|+.
T Consensus 2 ~I~~i~P~~g~~SGGt~itV~G~~Lds~---q~p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~ 61 (99)
T cd01181 2 TITRIEPEWSFLSGGTPITVTGTNLNTV---QEPRIRVKYGGVEKTSCKVRNSTLMTCPAPSL 61 (99)
T ss_pred EEEEeccCCCccCCCEEEEEEeeccCcc---cccEEEEEECCceeccceeCCCCEEEeCCCCC
Confidence 6999999999999999999999999764 3457899999953 455567888999999976
No 114
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.09 E-value=3.7e-06 Score=101.60 Aligned_cols=100 Identities=26% Similarity=0.299 Sum_probs=88.4
Q ss_pred cCCCCCc--cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCC
Q 003650 559 EGSKTTE--YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPT 636 (805)
Q Consensus 559 ~Gadin~--~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~ 636 (805)
.++++|. .-..|.|+||.|+..|..-++++|+..|+++|..|..|+||||.+...|+...+..|++.||++++
T Consensus 643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a----- 717 (785)
T KOG0521|consen 643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNA----- 717 (785)
T ss_pred chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccc-----
Confidence 3555654 335689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003650 637 SQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (805)
Q Consensus 637 ~~d~~G~TpL~lA~~~g~~~iv~lLle~ 664 (805)
.+.+|.+||++|....+.+++-+|.-.
T Consensus 718 -~~~~~~~~l~~a~~~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 718 -FDPDGKLPLDIAMEAANADIVLLLRLA 744 (785)
T ss_pred -cCccCcchhhHHhhhccccHHHHHhhh
Confidence 789999999999877777777666443
No 115
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.07 E-value=1.8e-05 Score=69.49 Aligned_cols=79 Identities=14% Similarity=0.058 Sum_probs=66.4
Q ss_pred eeeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeecceeeccccceeeeCCCCCCCeeEEEEEeCCCCcc
Q 003650 365 FSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPI 444 (805)
Q Consensus 365 f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph~~G~V~l~v~~~n~~~~ 444 (805)
..|..++|.-|.. |++|+|.|+.|.+ ..-.++||+.+++...|++..|.|.+|.+.+|...+.|...++. -
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~-~ 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGS------APGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGA-T 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCC------CCcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCc-c
Confidence 4699999999987 8899999998864 12578999999998899999999999999999999999987553 4
Q ss_pred cccccccc
Q 003650 445 SQVLNFEY 452 (805)
Q Consensus 445 se~~~Fey 452 (805)
|+...|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 66555654
No 116
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.03 E-value=7.6e-06 Score=81.15 Aligned_cols=68 Identities=19% Similarity=0.163 Sum_probs=51.9
Q ss_pred CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCC-CCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCC
Q 003650 560 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSG-LSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGA 627 (805)
Q Consensus 560 Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~G-advn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GA 627 (805)
+.++|.+|..|||+|+.||..|..+++.+|+.+| +.|...|..|.+++.+|-..|+.++|..|.+.-.
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ 70 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR 70 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence 3567777777888888887777777778777777 7777777777788888777777777777777633
No 117
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.83 E-value=8.3e-06 Score=95.03 Aligned_cols=73 Identities=26% Similarity=0.295 Sum_probs=66.3
Q ss_pred CCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHHcccccCccccc
Q 003650 596 LDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQN-PGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMT 674 (805)
Q Consensus 596 vn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d-~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~ 674 (805)
.|..|..|+|+||+|+..|..++++.||++|++++. +| ..|.||||-|...|+.+|+-+|+.+|+...+.+-.
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~v------qD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dke 118 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFV------QDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKE 118 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeee------ccccccchHhhHhhhhchHHHHHHHHhcCCceEEeccc
Confidence 688999999999999999999999999999999998 66 57999999999999999999999999766665543
No 118
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.82 E-value=5.5e-05 Score=89.55 Aligned_cols=127 Identities=13% Similarity=0.007 Sum_probs=101.7
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc---C--CCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhH
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVE---G--SKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHW 609 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~---G--adin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~ 609 (805)
.+....+.|+..|+.. .+++.++ . -++|+.|.-|+++||+|..+.+.+++++|++.+..+ .-+|.+
T Consensus 24 ~~e~~fL~a~E~gd~~--~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~ 94 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVP--LVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLL 94 (822)
T ss_pred hhhHHHHHHHHcCChH--HHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHH
Confidence 4556788899999987 4555544 2 467889999999999999999999999999987665 248999
Q ss_pred HHhcCCHHHHHHHHHcCCCCC----CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCc
Q 003650 610 AAYYGREKMVVDLLSAGAKPN----LVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQF 670 (805)
Q Consensus 610 Aa~~G~~~iV~~LL~~GAd~n----~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~ 670 (805)
|+..|..++|++|+.+-.... ..+++.+.-..+.||+.+||..++.+|+++|+.+|++...
T Consensus 95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 999999999999998643331 1123334556789999999999999999999999977644
No 119
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.76 E-value=4.9e-05 Score=82.16 Aligned_cols=58 Identities=21% Similarity=0.228 Sum_probs=33.5
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcCCCCC
Q 003650 573 VIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAGAKPN 630 (805)
Q Consensus 573 ~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n 630 (805)
-|..||+.|..+.|+.|++.|++||.+|.+...||.+|+.+||+.+|++||++||-..
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~ 96 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS 96 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc
Confidence 4555555555555555555555555555555555555555555555555555555443
No 120
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.72 E-value=5.7e-05 Score=75.11 Aligned_cols=67 Identities=34% Similarity=0.471 Sum_probs=63.1
Q ss_pred CCCCCcccCCCCchhhHHHhcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcc
Q 003650 593 GLSLDFRDKYGWTALHWAAYYGREKMVVDLLSAG-AKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQA 665 (805)
Q Consensus 593 Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~G-Ad~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~G 665 (805)
+.+||.+|..|||||++|+..|..+.|.+|+.+| +.+.+ .|..|.+++.+|-..|+.+++..|.+.-
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv------~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGV------TDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccc------cccccchHHHHHHhcChHHHHHHHHHHh
Confidence 5789999999999999999999999999999999 88887 8899999999999999999999998874
No 121
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=97.67 E-value=0.00018 Score=86.91 Aligned_cols=79 Identities=27% Similarity=0.268 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHhhHHHHH---HHHHHHHHHHHhhhHHHHHHHHHHHH
Q 003650 715 EAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRSWKVRKEFLNMRR 791 (805)
Q Consensus 715 ~aA~~iQ~afR~~s~r~R~q~~~~~~~~~~a~~l~Aa~~iq~~~r~~~~~~---~~~AAv~IQ~~~Rg~~~Rk~f~~~r~ 791 (805)
.++..||..+|.+..|+++...+ .++..+|...|++..|. +..||+.||+.+|+|..||+|+.++.
T Consensus 674 ~~~~~iq~~~r~~~~r~~f~~~r-----------~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y~~~~~ 742 (862)
T KOG0160|consen 674 AAKVLIQRQIRGYLARKKFLQLR-----------SAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRYRALIP 742 (862)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 35666999999999998877666 44555666666665555 78999999999999999999999999
Q ss_pred HHHHHHHhhhhcc
Q 003650 792 QAIKIQVILLCIV 804 (805)
Q Consensus 792 ~~v~IQ~~~Rg~~ 804 (805)
+++.||+.+||+.
T Consensus 743 ~~~~~qs~~r~~~ 755 (862)
T KOG0160|consen 743 ASITIQSGVRAML 755 (862)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999985
No 122
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=97.60 E-value=0.00027 Score=61.99 Aligned_cols=79 Identities=15% Similarity=0.092 Sum_probs=65.7
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeecceeeccccceeeeCCCCCCCeeEEEEEeCCCCccc
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPHSPGLFLLYMSLDGHKPIS 445 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph~~G~V~l~v~~~n~~~~s 445 (805)
.|..++|.-|. -|++|+|.|+.|.+ ..-.++||+.+++...|++..|.|.+|.+.+|...+.|...++. -|
T Consensus 2 ~I~~i~P~~g~--pG~~VtI~G~gFg~------~~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G~-~S 72 (81)
T cd00604 2 LIGSVGPVMGK--PGNTVTISGEGFGS------TGGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDGV-TS 72 (81)
T ss_pred eEeeEcCCCCC--CCCEEEEEEECCCC------CccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCCc-cc
Confidence 58889998776 68899999998854 12468999999988899999999999999999999999976553 57
Q ss_pred cccccccC
Q 003650 446 QVLNFEYR 453 (805)
Q Consensus 446 e~~~Feyr 453 (805)
+...|+|.
T Consensus 73 n~~~f~~l 80 (81)
T cd00604 73 NGYNFEVL 80 (81)
T ss_pred CcEeEEEc
Confidence 77778874
No 123
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.37 E-value=0.00025 Score=76.91 Aligned_cols=67 Identities=18% Similarity=0.113 Sum_probs=59.2
Q ss_pred chhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcccccccc
Q 003650 605 TALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTLAG 677 (805)
Q Consensus 605 TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l~~ 677 (805)
--|..||..|..+.|+.|++.|.++|. .|.....||.+|+-.||..+|++|+++||.........+.
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~------vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~R 104 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNA------VDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDR 104 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcch------hhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcch
Confidence 357899999999999999999999999 8899999999999999999999999999876655554433
No 124
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=97.31 E-value=0.00028 Score=45.63 Aligned_cols=21 Identities=33% Similarity=0.419 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhhhHHHHHHHH
Q 003650 767 MAAAARIQHRFRSWKVRKEFL 787 (805)
Q Consensus 767 ~~AAv~IQ~~~Rg~~~Rk~f~ 787 (805)
++||+.||+.+|||+.|++|.
T Consensus 1 ~~aai~iQ~~~R~~~~Rk~~k 21 (21)
T PF00612_consen 1 RKAAIIIQSYWRGYLARKRYK 21 (21)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcC
Confidence 368999999999999999984
No 125
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.21 E-value=0.00026 Score=86.01 Aligned_cols=90 Identities=18% Similarity=0.091 Sum_probs=80.8
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHh
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAY 612 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~ 612 (805)
..+.+.||.|+..+... ++++|++ |+++|.+|..|.||||.+...|+...+..|+++|++.++.|..|.+||++|..
T Consensus 654 ~~~~s~lh~a~~~~~~~--~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSG--AVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAME 731 (785)
T ss_pred hcccchhhhhhccchHH--HHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhh
Confidence 45678999999999877 7888888 99999999999999999999999999999999999999999999999999988
Q ss_pred cCCHHHHHHHHHc
Q 003650 613 YGREKMVVDLLSA 625 (805)
Q Consensus 613 ~G~~~iV~~LL~~ 625 (805)
..+.+++-+|...
T Consensus 732 ~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 732 AANADIVLLLRLA 744 (785)
T ss_pred hccccHHHHHhhh
Confidence 8777777665543
No 126
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.17 E-value=0.00047 Score=77.69 Aligned_cols=89 Identities=19% Similarity=0.158 Sum_probs=79.6
Q ss_pred ccccchHHHHHHcCCcHHHHHHHHHc-CC--CCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHH
Q 003650 534 PEAKDSFFELTLKSKLKEWLLERVVE-GS--KTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWA 610 (805)
Q Consensus 534 ~~~~t~L~~Aa~~~~l~~~lv~~Ll~-Ga--din~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~A 610 (805)
.+..+-||+|+..|+.+ +++++++ |. -++..|+.|.|+||-||..++..++.+|++.|+.+...|..|.||-.-|
T Consensus 897 ~~~~sllh~a~~tg~~e--ivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~era 974 (1004)
T KOG0782|consen 897 PDHCSLLHYAAKTGNGE--IVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERA 974 (1004)
T ss_pred cchhhHHHHHHhcCChH--HHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHH
Confidence 45567899999999987 8888888 43 3566889999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHH
Q 003650 611 AYYGREKMVVDLLS 624 (805)
Q Consensus 611 a~~G~~~iV~~LL~ 624 (805)
-..|..+++.+|-.
T Consensus 975 qqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 975 QQAGDPDLAAYLES 988 (1004)
T ss_pred HhcCCchHHHHHhh
Confidence 99999999999865
No 127
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.76 E-value=0.018 Score=64.87 Aligned_cols=62 Identities=27% Similarity=0.292 Sum_probs=52.7
Q ss_pred HHHHHHHHHCCCCCCcc------cCCCCchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHH
Q 003650 583 TWAILLFSWSGLSLDFR------DKYGWTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIAS 650 (805)
Q Consensus 583 ~~~v~~LL~~Gadvn~~------D~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~ 650 (805)
...|++|.+++++.|.. |..--|+||+|+..|..++|.+||+.|+|+.. +|..|.||.+++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~------kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST------KDGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh------cccCCCCcccccc
Confidence 56778888888877653 34467999999999999999999999988777 9999999999987
No 128
>PTZ00014 myosin-A; Provisional
Probab=96.61 E-value=0.0031 Score=77.45 Aligned_cols=38 Identities=11% Similarity=0.076 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhcc
Q 003650 767 MAAAARIQHRFRSWKVRKEFLNMRRQAIKIQVILLCIV 804 (805)
Q Consensus 767 ~~AAv~IQ~~~Rg~~~Rk~f~~~r~~~v~IQ~~~Rg~~ 804 (805)
...+..||+.+|||+.||+|++++++++.||+++|||+
T Consensus 777 ~~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l 814 (821)
T PTZ00014 777 EPLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHL 814 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999986
No 129
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=96.34 E-value=0.0018 Score=74.81 Aligned_cols=209 Identities=16% Similarity=0.213 Sum_probs=120.4
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCeecceeeccccceeeeCCCC-CCCeeEEEEEeCCCCcc
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGHKPI 444 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph-~~G~V~l~v~~~n~~~~ 444 (805)
.|.|+.|-.+.+.+|++|+..|..+.+ ......+|..+...-|+||. .+|.|.+.++.-...+-
T Consensus 244 vprd~~~~Q~~i~~~~~v~~~g~n~~~---------------~als~~~~~~s~~~~~l~~~d~~~~v~~~i~~~~~~~~ 308 (605)
T KOG3836|consen 244 VPRDMRRFQVLINGGVEVTLLGANFKD---------------IALSTQCSEESTMVNYLPPSDNPGSVSVSITDPSETSD 308 (605)
T ss_pred Cccccccccccccccceecccccchhh---------------hhhcccccccccceeeccccccCCCceeeecccccccc
Confidence 799999999999999999999998754 45567799999999999888 99999999986433322
Q ss_pred ccccccccCC----CCcccCCCCccccchhhHHHHHHHHHHHHhccccccccccCCCCCCchHHHhhhhhhhhcccCCHH
Q 003650 445 SQVLNFEYRS----PQLHAPVASSEDKSKWEEFQVQMRLAHLLFSSFKGLNILSSKVPPNSLKEAKKFASKSTCISNSWA 520 (805)
Q Consensus 445 se~~~Feyr~----~~~~~~~~~~~~~~~~~el~l~~Rl~~ll~~~~~~lqil~~k~~~~~l~d~~~~a~~i~~~~~~~~ 520 (805)
+..-..+-+. +..+.+.++++. +++.+. ++|++.++.+. ++++...+.... +|.
T Consensus 309 ~~~~~~~~~~~~~~~~i~~yvp~t~~-----------q~~~~a------l~ivg~n~~~~-l~~a~~~~~~s~----~~~ 366 (605)
T KOG3836|consen 309 SNNSNSSPPTSSSTKAIFTYVPSTDR-----------QLIEYA------LQIVGLNMNGK-LEDARNIANSSL----SPT 366 (605)
T ss_pred ccccccCCccCCCcccceeeecCCCc-----------eeeeeE------EEEecccccCc-hhhhcCCccccC----CCC
Confidence 2211111111 224445544442 344333 67888888776 444443320000 010
Q ss_pred HHHHHhCCCCCCcccccchHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccc
Q 003650 521 YLFKSVGDKRTSLPEAKDSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRD 600 (805)
Q Consensus 521 ~li~~l~~~~~~~~~~~t~L~~Aa~~~~l~~~lv~~Ll~Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D 600 (805)
...+......+..++.. +.. ..-..+.. +--...++ |+..+....+-.|++.|+.++..|
T Consensus 367 ---------~~~~~~n~~~~s~~aI~-------~~~--~~~~~s~~-~lSl~~~~-~~~~~~ss~v~~lik~~~~~~~~d 426 (605)
T KOG3836|consen 367 ---------SPMMNNNSEQLSPYAIM-------SQK--PTNNLSTV-NLSLCDVR-AALNNSSSLVFTLIKKGAHPNDDD 426 (605)
T ss_pred ---------CcceeccccccCcccee-------eec--CCCCCCcc-ceeeehhh-hhhcCCccceeeeecccCccchhc
Confidence 00000000111000000 000 00001100 00011122 566666667777778888888888
Q ss_pred CCCCchhhHHHhcCCHHHHHHHHHcCCCCCC
Q 003650 601 KYGWTALHWAAYYGREKMVVDLLSAGAKPNL 631 (805)
Q Consensus 601 ~~G~TpLh~Aa~~G~~~iV~~LL~~GAd~n~ 631 (805)
..|.||+|+++..|..++.+.++....+.+.
T Consensus 427 ~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~ 457 (605)
T KOG3836|consen 427 KFGFTPLHIPQISGDPRIIQLLLNCKVAISL 457 (605)
T ss_pred ccccccccccCCCCCHHHhhhhhhhhhhhhc
Confidence 8888888888888888888887765555444
No 130
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=96.32 E-value=0.0034 Score=42.78 Aligned_cols=21 Identities=33% Similarity=0.442 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhhhHHHHHHHH
Q 003650 767 MAAAARIQHRFRSWKVRKEFL 787 (805)
Q Consensus 767 ~~AAv~IQ~~~Rg~~~Rk~f~ 787 (805)
.++|+.||+.+|||+.|++|.
T Consensus 3 ~~aa~~IQa~~Rg~~~r~~y~ 23 (26)
T smart00015 3 TRAAIIIQAAWRGYLARKRYK 23 (26)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 478999999999999999994
No 131
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.10 E-value=0.0083 Score=39.38 Aligned_cols=27 Identities=44% Similarity=0.463 Sum_probs=16.3
Q ss_pred CCchhhHHHhcCCHHHHHHHHHcCCCC
Q 003650 603 GWTALHWAAYYGREKMVVDLLSAGAKP 629 (805)
Q Consensus 603 G~TpLh~Aa~~G~~~iV~~LL~~GAd~ 629 (805)
|.||||+|+..|+.++++.|+..|.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666655544
No 132
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]
Probab=96.05 E-value=0.006 Score=74.08 Aligned_cols=40 Identities=33% Similarity=0.407 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhcc
Q 003650 765 KKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQVILLCIV 804 (805)
Q Consensus 765 ~~~~AAv~IQ~~~Rg~~~Rk~f~~~r~~~v~IQ~~~Rg~~ 804 (805)
.+.++++.||+.+|+|..||.|+++|++++.||+.+||++
T Consensus 671 vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~ 710 (862)
T KOG0160|consen 671 VLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVL 710 (862)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Confidence 3456667777777777777777777777777777777764
No 133
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.38 E-value=0.027 Score=36.82 Aligned_cols=29 Identities=24% Similarity=0.309 Sum_probs=26.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q 003650 569 HGQGVIHLCAMLGYTWAILLFSWSGLSLD 597 (805)
Q Consensus 569 ~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn 597 (805)
.|.|+||+|+..|+.++++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999998765
No 134
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.28 E-value=0.029 Score=67.21 Aligned_cols=88 Identities=16% Similarity=0.061 Sum_probs=69.6
Q ss_pred cccchHHHHHHcCCcHHHHHHHHHc-CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC----------cccCCC
Q 003650 535 EAKDSFFELTLKSKLKEWLLERVVE-GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLD----------FRDKYG 603 (805)
Q Consensus 535 ~~~t~L~~Aa~~~~l~~~lv~~Ll~-Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn----------~~D~~G 603 (805)
-|++.|+.|....+++ ++++|++ +..+ .-+|.+|...|+.++|+.++.+-.... ..-.-+
T Consensus 61 lGr~al~iai~nenle--~~eLLl~~~~~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~d 131 (822)
T KOG3609|consen 61 LGRLALHIAIDNENLE--LQELLLDTSSEE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPD 131 (822)
T ss_pred HhhhceecccccccHH--HHHHHhcCcccc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCC
Confidence 4778888888888887 8888877 4333 457888999999999999997543221 122347
Q ss_pred CchhhHHHhcCCHHHHHHHHHcCCCCCC
Q 003650 604 WTALHWAAYYGREKMVVDLLSAGAKPNL 631 (805)
Q Consensus 604 ~TpLh~Aa~~G~~~iV~~LL~~GAd~n~ 631 (805)
.|||.+||..++.+|+++||..|+++-.
T Consensus 132 itPliLAAh~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 132 ITPLMLAAHLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred ccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence 7999999999999999999999999866
No 135
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=95.23 E-value=0.029 Score=65.60 Aligned_cols=41 Identities=17% Similarity=0.298 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhcc
Q 003650 763 VRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQVILLCIV 804 (805)
Q Consensus 763 ~~~~~~AAv~IQ~~~Rg~~~Rk~f~~~r~~~v~IQ~~~Rg~~ 804 (805)
...+-.-++.|||.+|||..|.+|++||++++.|+ .||.|.
T Consensus 692 ~~~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K 732 (1001)
T KOG0164|consen 692 AERLPSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYK 732 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 33445678999999999999999999999999988 666553
No 136
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=94.88 E-value=0.058 Score=63.22 Aligned_cols=60 Identities=20% Similarity=0.289 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 003650 714 AEAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRKKMAAAARIQHRFRSWKVRKEFLN 788 (805)
Q Consensus 714 a~aA~~iQ~afR~~s~r~R~q~~~~~~~~~~a~~l~Aa~~iq~~~r~~~~~~~~~AAv~IQ~~~Rg~~~Rk~f~~ 788 (805)
.+.+..||+++|.+..|.|+++++ |+..|-.+||. -|.+.++..||+.+|||+.|+.|-+
T Consensus 696 ~~lvtllQK~~RG~~~R~ry~rmk------------a~~~ii~wyR~---~K~ks~v~el~~~~rg~k~~r~ygk 755 (1001)
T KOG0164|consen 696 PSLVTLLQKAWRGWLARQRYRRMK------------ASATIIRWYRR---YKLKSYVQELQRRFRGAKQMRDYGK 755 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHH---HHHHHHHHHHHHHHHhhhhccccCC
Confidence 458899999999999999999765 44444447664 4677889999999999999998743
No 137
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=94.87 E-value=0.097 Score=47.94 Aligned_cols=82 Identities=20% Similarity=0.159 Sum_probs=64.4
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCC-------eecceeec----cccceeeeCCCC------C
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-------VRVPAEFV----QAGVYRCFLPPH------S 428 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~-------v~Vpa~~~----~~gvLrC~~Pph------~ 428 (805)
.|..+|-.-++..||-+|.++|..+. +....+.|++ .++-+.+- +...|+|-+||= .
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~------k~dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVN------KPDIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCC------CCCCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 58889999999999999999998653 2347899998 55555542 666789988875 5
Q ss_pred CCeeEEEEEeCCCCccccccccccC
Q 003650 429 PGLFLLYMSLDGHKPISQVLNFEYR 453 (805)
Q Consensus 429 ~G~V~l~v~~~n~~~~se~~~Feyr 453 (805)
|=.|++++...++...|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 5668888887766679999999995
No 138
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=94.85 E-value=0.064 Score=66.55 Aligned_cols=87 Identities=17% Similarity=0.141 Sum_probs=72.7
Q ss_pred CcceeeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCe-ecceeeccccc-eeeeCCCC-CCCeeEEEEEe
Q 003650 362 EHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-RVPAEFVQAGV-YRCFLPPH-SPGLFLLYMSL 438 (805)
Q Consensus 362 ~~~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v-~Vpa~~~~~gv-LrC~~Pph-~~G~V~l~v~~ 438 (805)
=|.+.|..+.|.||+..|||.|+++|+.+.. .++-.|++|.. +-+....+++. ++|..++- .++.-++.|..
T Consensus 140 ~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~-----gs~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~v~f 214 (1025)
T KOG3610|consen 140 LQGPCFLSAEPVNGPASGGTQVHCTGSPLDT-----GSCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVLVSF 214 (1025)
T ss_pred ecceeEEeeccCcCCCCCCcceEEecccccc-----CCCceEEecCCccceeEeecCceEEEEecCCCCCCCccceEEEe
Confidence 4567899999999999999999999999865 47789999998 77788888887 99999988 44778888888
Q ss_pred CCCCcccc-ccccccCC
Q 003650 439 DGHKPISQ-VLNFEYRS 454 (805)
Q Consensus 439 ~n~~~~se-~~~Feyr~ 454 (805)
+... +.. ...|+|..
T Consensus 215 ~~~~-~~~~~~~f~y~~ 230 (1025)
T KOG3610|consen 215 DRTP-QKLTPLAFNYTA 230 (1025)
T ss_pred cccc-cccCCCCccccc
Confidence 7654 444 57888887
No 139
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.84 E-value=0.04 Score=62.25 Aligned_cols=59 Identities=20% Similarity=0.134 Sum_probs=49.5
Q ss_pred HHHHHHc-CCCCCc------cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHH
Q 003650 553 LLERVVE-GSKTTE------YDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAA 611 (805)
Q Consensus 553 lv~~Ll~-Gadin~------~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa 611 (805)
.++.|.+ +.++|. .+..--|+||+|+..|...+|..||..|+|+...|..|+||..+++
T Consensus 406 ~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 406 SIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred HHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 5566665 555543 4445689999999999999999999999999999999999999887
No 140
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=94.42 E-value=0.11 Score=47.31 Aligned_cols=82 Identities=21% Similarity=0.145 Sum_probs=58.9
Q ss_pred ceeeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCe--------e----cceeeccccceeeeCCCC----
Q 003650 364 LFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV--------R----VPAEFVQAGVYRCFLPPH---- 427 (805)
Q Consensus 364 ~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v--------~----Vpa~~~~~gvLrC~~Pph---- 427 (805)
+..|.+.|-.-++..||-||.++|..+... -.|.|-+. + +..+.++...|+|.+||=
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~kD-------ikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~ 73 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLKD-------SKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH 73 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCCC-------CEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence 357999999999999999999999765331 33444321 1 223445678999999975
Q ss_pred --CCCeeEEEEEeCCCCccccccccccC
Q 003650 428 --SPGLFLLYMSLDGHKPISQVLNFEYR 453 (805)
Q Consensus 428 --~~G~V~l~v~~~n~~~~se~~~Feyr 453 (805)
.|=.|.|++....+ ..|+...|+|.
T Consensus 74 I~~pV~V~~~l~~~~~-~~S~~~~FtY~ 100 (101)
T cd01178 74 VAAPVQVQFYVVNGKR-KRSQPQTFTYT 100 (101)
T ss_pred cCCceEEEEEEEcCCC-CcCCCCCcEec
Confidence 56667777765434 57999999995
No 141
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K. The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....
Probab=93.58 E-value=0.044 Score=35.37 Aligned_cols=15 Identities=33% Similarity=0.284 Sum_probs=13.5
Q ss_pred HHHHHHHHHhhhhcc
Q 003650 790 RRQAIKIQVILLCIV 804 (805)
Q Consensus 790 r~~~v~IQ~~~Rg~~ 804 (805)
++++|+||++||||+
T Consensus 1 ~~aai~iQ~~~R~~~ 15 (21)
T PF00612_consen 1 RKAAIIIQSYWRGYL 15 (21)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 578999999999985
No 142
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=93.43 E-value=0.21 Score=44.19 Aligned_cols=66 Identities=15% Similarity=0.201 Sum_probs=52.5
Q ss_pred eEEEEECCCCCCcccCCCCcEEEEcCCeecceeeccccceeeeCCCC-----------CCCeeEEEEEeCCCCccccccc
Q 003650 381 TKILVTGFFHKDCLHLSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-----------SPGLFLLYMSLDGHKPISQVLN 449 (805)
Q Consensus 381 ~kVlI~G~f~~~~~~~~~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph-----------~~G~V~l~v~~~n~~~~se~~~ 449 (805)
.-+-++|.+| ..++.+-||++++-+.+=.+-.|.|..|+- +|..||+.+--..+..-+.-..
T Consensus 20 amlEl~GenF-------~pnLkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENF-------TPNLKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcC-------CCCceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 4566889988 446999999999998888888999999964 6678999888877765566666
Q ss_pred cccC
Q 003650 450 FEYR 453 (805)
Q Consensus 450 Feyr 453 (805)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 7774
No 143
>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function.
Probab=93.18 E-value=0.18 Score=59.40 Aligned_cols=101 Identities=26% Similarity=0.411 Sum_probs=67.4
Q ss_pred CChhHHHHHHhcCcc-------ceeccCCCCCCCCccEEe-ee--hhhhhcccccCccceeccCCCchhhhhhhcccCCE
Q 003650 33 LRPNEIHAILCNSKY-------FSINAKPVNLPKSGTVVL-FD--RKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNE 102 (805)
Q Consensus 33 ~~~~e~~~~l~~~~~-------~~~~~~~~~~p~~g~~~~-~~--r~~~~~~~~dg~~w~~~~~~~~~~e~~~~lk~~~~ 102 (805)
|..++|+++|..--+ |..+. -.+|+-||||| |- -++.-.|-.|||.|.- -|.--+..|+|.
T Consensus 30 l~~~~~~~~Ll~ap~i~r~~~P~~Wty--lD~P~DGtv~L~wqp~~~lg~~fasDGy~wad-------~E~~y~~~~~G~ 100 (669)
T PF08549_consen 30 LPPETVVEYLLKAPQIARDTAPFFWTY--LDKPPDGTVLLTWQPLNRLGTNFASDGYVWAD-------PEQAYTHEVNGY 100 (669)
T ss_pred CCHHHHHHHHHhchhhhccCCCeEeec--ccCCCCCcEEEEecCchhcCCcCCCCcceecC-------hhheeeecCCCe
Confidence 455666777755433 22222 36789999987 43 2445779999999975 355566667665
Q ss_pred ee-----EEEEeeecCCCCcceeeEeecccCCC---------CceEEEeccccC
Q 003650 103 ER-----IHVYYAHGEDSPTFVRRCYWLLDKTL---------ENIVLVHYRETH 142 (805)
Q Consensus 103 ~~-----~~~~y~~~~~~~~f~rr~y~~~~~~~---------~~~vlvhy~~~~ 142 (805)
.+ =++|+-=+|.....-||.|-|+-... ++.+||||-.-.
T Consensus 101 ~lEi~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~ 154 (669)
T PF08549_consen 101 TLEIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAP 154 (669)
T ss_pred EEEEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCC
Confidence 53 12233336888899999999995433 578999998754
No 144
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=92.91 E-value=0.37 Score=43.97 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=57.4
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCCe-------e-----cceeeccccceeeeCCCC------
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGEV-------R-----VPAEFVQAGVYRCFLPPH------ 427 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~v-------~-----Vpa~~~~~gvLrC~~Pph------ 427 (805)
.|.++|=.-|++.||.||.+++.... +-...+.|-+. + -++.+-....+++-+||=
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~------K~dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQ------KEDIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccC------CCCCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 69999999999999999999997543 22244544432 1 133445567799999975
Q ss_pred CCCeeEEEEEeCCCCccccccccccC
Q 003650 428 SPGLFLLYMSLDGHKPISQVLNFEYR 453 (805)
Q Consensus 428 ~~G~V~l~v~~~n~~~~se~~~Feyr 453 (805)
.|=.|-+++.-.....+|+...|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 45556666666544568999999995
No 145
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=91.50 E-value=0.6 Score=59.41 Aligned_cols=76 Identities=28% Similarity=0.250 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHhhHHHHH---HHHHHHHHHHHhhhHHHHHHHHHHHH
Q 003650 715 EAAARIQAAFREHSLKVQTKAIRFSSPEEEAQNIIAALKIQHAFRNFEVRK---KMAAAARIQHRFRSWKVRKEFLNMRR 791 (805)
Q Consensus 715 ~aA~~iQ~afR~~s~r~R~q~~~~~~~~~~a~~l~Aa~~iq~~~r~~~~~~---~~~AAv~IQ~~~Rg~~~Rk~f~~~r~ 791 (805)
.+|.+||+++|++..|+|+.+.. ..+.+...++..++-++... ...+++.||..+|....|++|.....
T Consensus 746 ~~~~~iq~aiR~~~~rrr~~~~~--------k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~ 817 (1463)
T COG5022 746 NIATRIQRAIRGRYLRRRYLQAL--------KRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLA 817 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHH
Confidence 58999999999999998887543 33444555555555443322 24889999999999999999999999
Q ss_pred HHHHHHH
Q 003650 792 QAIKIQV 798 (805)
Q Consensus 792 ~~v~IQ~ 798 (805)
.|+++|.
T Consensus 818 ~i~~lq~ 824 (1463)
T COG5022 818 CIIKLQK 824 (1463)
T ss_pred HHHHHHH
Confidence 9999993
No 146
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues. Calmodulin-binding motif.
Probab=87.35 E-value=0.32 Score=33.05 Aligned_cols=16 Identities=31% Similarity=0.285 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhhhhcc
Q 003650 789 MRRQAIKIQVILLCIV 804 (805)
Q Consensus 789 ~r~~~v~IQ~~~Rg~~ 804 (805)
+..++++||+.||||.
T Consensus 2 ~~~aa~~IQa~~Rg~~ 17 (26)
T smart00015 2 LTRAAIIIQAAWRGYL 17 (26)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5678999999999985
No 147
>PTZ00014 myosin-A; Provisional
Probab=82.62 E-value=2.7 Score=52.29 Aligned_cols=19 Identities=32% Similarity=0.371 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhhhHHHHHH
Q 003650 767 MAAAARIQHRFRSWKVRKE 785 (805)
Q Consensus 767 ~~AAv~IQ~~~Rg~~~Rk~ 785 (805)
+.|+++||+.+|+|+.||+
T Consensus 800 ~~~~~~iQ~~~R~~l~~~~ 818 (821)
T PTZ00014 800 IKSLVRIQAHLRRHLVIAE 818 (821)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999975
No 148
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=82.10 E-value=2.7 Score=53.85 Aligned_cols=44 Identities=30% Similarity=0.311 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhcc
Q 003650 761 FEVRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKIQVILLCIV 804 (805)
Q Consensus 761 ~~~~~~~~AAv~IQ~~~Rg~~~Rk~f~~~r~~~v~IQ~~~Rg~~ 804 (805)
.|..+....|++||+++||+..||+|+...+.+.+||...+|.+
T Consensus 739 ~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~ 782 (1463)
T COG5022 739 MRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFR 782 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34556678999999999999999999999999999999888865
No 149
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=79.07 E-value=6.3 Score=41.09 Aligned_cols=95 Identities=14% Similarity=0.068 Sum_probs=62.3
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCcccC----CCCchhhHHHh--cCCHHHHHHHHHcC-CCCCCCCCCCCCCCCC
Q 003650 570 GQGVIHLCAMLGYTWAILLFSWSGLSLDFRDK----YGWTALHWAAY--YGREKMVVDLLSAG-AKPNLVTDPTSQNPGG 642 (805)
Q Consensus 570 G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~----~G~TpLh~Aa~--~G~~~iV~~LL~~G-Ad~n~~td~~~~d~~G 642 (805)
-.++|-+|...+..+++.+|+.. -+....|. .+.--+-++.. .-...+.+..|+.| +++|. +-.+-..|
T Consensus 179 A~~Am~~si~~~K~dva~~lls~-f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~---~F~~~NSG 254 (284)
T PF06128_consen 179 AHQAMWLSIGNAKEDVALYLLSK-FNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNK---KFQKVNSG 254 (284)
T ss_pred HHHHHHHHhcccHHHHHHHHHhh-cceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccch---hhhccCCc
Confidence 36777788877778888888753 11111221 12222333322 23467778888887 56665 22245789
Q ss_pred CcHHHHHHHcCCHHHHHHHHHccccc
Q 003650 643 LNAADIASKKGFDGLAAFLSEQALVA 668 (805)
Q Consensus 643 ~TpL~lA~~~g~~~iv~lLle~Ga~~ 668 (805)
.|-|+-|...+..+++.+|+++||..
T Consensus 255 dtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 255 DTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred chHHHhHHhcCcHHHHHHHHHcCccc
Confidence 99999999999999999999999753
No 150
>PF08763 Ca_chan_IQ: Voltage gated calcium channel IQ domain; InterPro: IPR014873 Ca2+ ions are unique in that they not only carry charge but they are also the most widely used of diffusible second messengers. Voltage-dependent Ca2+ channels (VDCC) are a family of molecules that allow cells to couple electrical activity to intracellular Ca2+ signalling. The opening and closing of these channels by depolarizing stimuli, such as action potentials, allows Ca2+ ions to enter neurons down a steep electrochemical gradient, producing transient intracellular Ca2+ signals. Many of the processes that occur in neurons, including transmitter release, gene transcription and metabolism are controlled by Ca2+ influx occurring simultaneously at different cellular locales. The pore is formed by the alpha-1 subunit which incorporates the conduction pore, the voltage sensor and gating apparatus, and the known sites of channel regulation by second messengers, drugs, and toxins []. The activity of this pore is modulated by 4 tightly-coupled subunits: an intracellular beta subunit; a transmembrane gamma subunit; and a disulphide-linked complex of alpha-2 and delta subunits, which are proteolytically cleaved from the same gene product. Properties of the protein including gating voltage-dependence, G protein modulation and kinase susceptibility can be influenced by these subunits. Voltage-gated calcium channels are classified as T, L, N, P, Q and R, and are distinguished by their sensitivity to pharmacological blocks, single-channel conductance kinetics, and voltage-dependence. On the basis of their voltage activation properties, the voltage-gated calcium classes can be further divided into two broad groups: the low (T-type) and high (L, N, P, Q and R-type) threshold-activated channels. The voltage-gated calcium channel alpha 1 subunit contains an IQ domain, named for its isoleucine-glutamine (IQ) motif, which interacts with hydrophobic pockets of Ca2+/calmodulin []. The interaction regulates two self-regulatory calcium dependent feedback mechanisms, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF). ; PDB: 3OXQ_F 2F3Z_B 3G43_E 2F3Y_B 2BE6_D 3DVM_B 3BXK_D 2VAY_B 3DVK_B 3BXL_B ....
Probab=77.66 E-value=2.5 Score=31.01 Aligned_cols=19 Identities=47% Similarity=0.503 Sum_probs=17.1
Q ss_pred HHHHHHHHHhhhHHHHHHH
Q 003650 768 AAAARIQHRFRSWKVRKEF 786 (805)
Q Consensus 768 ~AAv~IQ~~~Rg~~~Rk~f 786 (805)
-||..||..||.||.||.-
T Consensus 10 YAt~lI~dyfr~~K~rk~~ 28 (35)
T PF08763_consen 10 YATLLIQDYFRQFKKRKEQ 28 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999874
No 151
>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=75.39 E-value=7.4 Score=46.73 Aligned_cols=26 Identities=42% Similarity=0.404 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHH
Q 003650 763 VRKKMAAAARIQHRFRSWKVRKEFLN 788 (805)
Q Consensus 763 ~~~~~~AAv~IQ~~~Rg~~~Rk~f~~ 788 (805)
.++..+||+.||..+|||..||+|..
T Consensus 26 qrrr~~aa~~iq~~lrsyl~Rkk~~~ 51 (1096)
T KOG4427|consen 26 QRRREAAALFIQRVLRSYLVRKKAQI 51 (1096)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455799999999999999988853
No 152
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=72.68 E-value=6.6 Score=46.97 Aligned_cols=37 Identities=32% Similarity=0.506 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 003650 760 NFEVRKKMAAAARIQHRFRSWKVRKEFLNMRRQAIKI 796 (805)
Q Consensus 760 ~~~~~~~~~AAv~IQ~~~Rg~~~Rk~f~~~r~~~v~I 796 (805)
..|+++-..-|.+||+.||.+..||+|.++|..+.++
T Consensus 689 emRer~~d~~A~~IQkAWRrfv~rrky~k~ree~t~l 725 (1106)
T KOG0162|consen 689 EMRERKWDGMARRIQKAWRRFVARRKYEKMREEATKL 725 (1106)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666677999999999999999999999987765
No 153
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=66.26 E-value=9 Score=40.01 Aligned_cols=92 Identities=20% Similarity=0.086 Sum_probs=60.0
Q ss_pred ccchHHHHHHcCCcHHHHHHHHHcCCCCCccC----CCCChHHHHHHHc--CCHHHHHHHHHCC-CCCCc---ccCCCCc
Q 003650 536 AKDSFFELTLKSKLKEWLLERVVEGSKTTEYD----VHGQGVIHLCAML--GYTWAILLFSWSG-LSLDF---RDKYGWT 605 (805)
Q Consensus 536 ~~t~L~~Aa~~~~l~~~lv~~Ll~Gadin~~D----~~G~T~LH~Aa~~--G~~~~v~~LL~~G-advn~---~D~~G~T 605 (805)
..+.+.++.-+++ +.+..+|+..-+....| ..+.--+-++-.. ....+++.+|.+| ++||. +-+.|.|
T Consensus 179 A~~Am~~si~~~K--~dva~~lls~f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdt 256 (284)
T PF06128_consen 179 AHQAMWLSIGNAK--EDVALYLLSKFNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDT 256 (284)
T ss_pred HHHHHHHHhcccH--HHHHHHHHhhcceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcch
Confidence 3455555553333 33566666533332222 1233344444332 3567888999888 67875 3457999
Q ss_pred hhhHHHhcCCHHHHHHHHHcCCCC
Q 003650 606 ALHWAAYYGREKMVVDLLSAGAKP 629 (805)
Q Consensus 606 pLh~Aa~~G~~~iV~~LL~~GAd~ 629 (805)
-|--|..++..+++.+||++||-.
T Consensus 257 MLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 257 MLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred HHHhHHhcCcHHHHHHHHHcCccc
Confidence 999999999999999999999954
No 154
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=61.82 E-value=7.2 Score=45.96 Aligned_cols=46 Identities=17% Similarity=0.277 Sum_probs=35.9
Q ss_pred CCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCc
Q 003650 560 GSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWT 605 (805)
Q Consensus 560 Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~T 605 (805)
++.++..|..|.+|+|+++..|..++++.++..-.+++.....|.+
T Consensus 419 ~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~ 464 (605)
T KOG3836|consen 419 GAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI 464 (605)
T ss_pred cCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence 6778888999999999999999999999888665555554444443
No 155
>KOG0942 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]
Probab=60.26 E-value=17 Score=44.73 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 003650 762 EVRKKMAAAARIQHRFRSWKVRKEFLNMRRQA 793 (805)
Q Consensus 762 ~~~~~~~AAv~IQ~~~Rg~~~Rk~f~~~r~~~ 793 (805)
+.|+..++|+.+|+.+||+..|+++..+-|..
T Consensus 24 e~rk~e~~av~vQs~~Rg~~~r~~~~~~~R~~ 55 (1001)
T KOG0942|consen 24 EERKQEKNAVKVQSFWRGFRVRHNQKLLFREE 55 (1001)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667789999999999999999998887764
No 156
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton]
Probab=58.88 E-value=21 Score=43.04 Aligned_cols=31 Identities=19% Similarity=0.124 Sum_probs=26.1
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 003650 768 AAAARIQHRFRSWKVRKEFLNMRRQAIKIQV 798 (805)
Q Consensus 768 ~AAv~IQ~~~Rg~~~Rk~f~~~r~~~v~IQ~ 798 (805)
.+.+++|+..|||..||+|.....-++||=+
T Consensus 814 e~v~k~Q~~~Rg~L~rkr~~~ri~~~~K~~~ 844 (1259)
T KOG0163|consen 814 ECVLKAQRIARGYLARKRHRPRIAGIRKINA 844 (1259)
T ss_pred HHHHHHHHHHHHHHHHhhhchHHHHHHHHHH
Confidence 5788999999999999999887777766644
No 157
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=58.59 E-value=11 Score=47.50 Aligned_cols=76 Identities=22% Similarity=0.202 Sum_probs=52.4
Q ss_pred CcceeeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCC--eecceeeccccceeeeCCCCC--CCeeEEEEE
Q 003650 362 EHLFSITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE--VRVPAEFVQAGVYRCFLPPHS--PGLFLLYMS 437 (805)
Q Consensus 362 ~~~f~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~--v~Vpa~~~~~gvLrC~~Pph~--~G~V~l~v~ 437 (805)
-+.++|++|+|.-++.+||+.|+|.|.++...-+....... +=|- ..++.+..-..-+.|..-++. ||.|.+.|-
T Consensus 47 c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v~-Va~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v~ 125 (1025)
T KOG3610|consen 47 CPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGVK-VAGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAVG 125 (1025)
T ss_pred cCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCce-EeeeecCCCccccccccceeeccCCCCCCCCceeEEec
Confidence 56778999999999999999999999988653211111111 1111 124445555667889888884 799998888
Q ss_pred e
Q 003650 438 L 438 (805)
Q Consensus 438 ~ 438 (805)
.
T Consensus 126 ~ 126 (1025)
T KOG3610|consen 126 V 126 (1025)
T ss_pred c
Confidence 4
No 158
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=53.78 E-value=41 Score=34.28 Aligned_cols=111 Identities=14% Similarity=0.059 Sum_probs=68.0
Q ss_pred chHHHHHHcCCcHHHHHHHHHcCCCCCccCCCCChHHHHHHHcCCHHHHHHHHHCCCC----------CCcccC------
Q 003650 538 DSFFELTLKSKLKEWLLERVVEGSKTTEYDVHGQGVIHLCAMLGYTWAILLFSWSGLS----------LDFRDK------ 601 (805)
Q Consensus 538 t~L~~Aa~~~~l~~~lv~~Ll~Gadin~~D~~G~T~LH~Aa~~G~~~~v~~LL~~Gad----------vn~~D~------ 601 (805)
.+|+..|.+.+.-. ++++..+-...+ -...++..-+||...+.++|+++-..=.- +..+|-
T Consensus 47 ~CLl~HAVk~nmL~-ILqkyke~L~~~--~~~~q~LFElAC~~qkydiV~WI~qnL~i~~~~~iFdIA~~~kDlsLyslG 123 (192)
T PF03158_consen 47 WCLLYHAVKYNMLS-ILQKYKEDLENE--RYLNQELFELACEEQKYDIVKWIGQNLHIYNPEDIFDIAFAKKDLSLYSLG 123 (192)
T ss_pred HHHHHHHHHcCcHH-HHHHHHHHhhcc--hhHHHHHHHHHHHHccccHHHHHhhccCCCCchhhhhhhhhccchhHHHHH
Confidence 45655555544333 444444411111 13457777788888888888777321000 000110
Q ss_pred -----------CC-------CchhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH
Q 003650 602 -----------YG-------WTALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSE 663 (805)
Q Consensus 602 -----------~G-------~TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle 663 (805)
.+ .--|.+|+..|-...|--.|++|.+++. ++|..|+..+|..|+.+++.
T Consensus 124 Y~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 124 YKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------------HHHHHHHHhhHHHHHHHhhc
Confidence 01 1236789999999999888999887642 78999999999999988863
No 159
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=51.73 E-value=22 Score=36.14 Aligned_cols=46 Identities=20% Similarity=0.140 Sum_probs=41.2
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHH
Q 003650 573 VIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLS 624 (805)
Q Consensus 573 ~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~ 624 (805)
-|.+|+..|....+...+++|.+++. ++|..|+.++|..++.+++.
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 36789999999999999999998874 79999999999999998874
No 160
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=44.62 E-value=69 Score=41.61 Aligned_cols=38 Identities=21% Similarity=0.155 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHH-------HHHHHHHhhhhcc
Q 003650 767 MAAAARIQHRFRSWKVRKEFLNMRR-------QAIKIQVILLCIV 804 (805)
Q Consensus 767 ~~AAv~IQ~~~Rg~~~Rk~f~~~r~-------~~v~IQ~~~Rg~~ 804 (805)
..-++.+|+..||...|+.|.+..+ ++++||.++|+.+
T Consensus 592 ~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~ 636 (1401)
T KOG2128|consen 592 KKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFP 636 (1401)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhcc
Confidence 3567888888888888888777665 5788888888753
No 161
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=41.09 E-value=22 Score=37.16 Aligned_cols=48 Identities=23% Similarity=0.199 Sum_probs=39.6
Q ss_pred HHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcccccCcccccc
Q 003650 622 LLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQALVAQFNDMTL 675 (805)
Q Consensus 622 LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~Ga~~~~~~~~l 675 (805)
|++.||-.|. .|....||=++|..+|+..+-+.|++.|+.+.+--..+
T Consensus 1 lle~ga~wn~------id~~n~t~gd~a~ern~~rly~~lv~~gv~Selll~~l 48 (271)
T KOG1709|consen 1 LLEYGAGWNF------IDYENKTVGDLALERNQSRLYRRLVEAGVPSELLLFAL 48 (271)
T ss_pred CcccCCCccc------cChhhCCchHHHHHccHHHHHHHHHHcCCchhhhhhcc
Confidence 4678888888 78899999999999999999999999998776544443
No 162
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]
Probab=41.03 E-value=43 Score=45.36 Aligned_cols=40 Identities=23% Similarity=0.176 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHHHHhhhhcc
Q 003650 765 KKMAAAARIQHRFRSWKVRKEFLNMRR---QAIKIQVILLCIV 804 (805)
Q Consensus 765 ~~~~AAv~IQ~~~Rg~~~Rk~f~~~r~---~~v~IQ~~~Rg~~ 804 (805)
+...--+.+|..+|||..|+.|.+.+. ++..||+.+|-|.
T Consensus 771 ~ls~ii~~fQA~~Rg~l~r~~~~kr~~~~~ai~~iQ~N~r~~~ 813 (1930)
T KOG0161|consen 771 KLSQIITLFQAAIRGYLARKEFKKRLQQLDAIKVIQRNIRAYL 813 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344667788999999999999998876 6788899998763
No 163
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=40.99 E-value=42 Score=28.76 Aligned_cols=48 Identities=13% Similarity=0.037 Sum_probs=35.1
Q ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCchhhHHHhcCCHHHHHHHHHc
Q 003650 571 QGVIHLCAMLGYTWAILLFSWSGLSLDFRDKYGWTALHWAAYYGREKMVVDLLSA 625 (805)
Q Consensus 571 ~T~LH~Aa~~G~~~~v~~LL~~Gadvn~~D~~G~TpLh~Aa~~G~~~iV~~LL~~ 625 (805)
...|..|...|+.++++.+++.+ .++ ...|..|+..-+.+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 34578888888888888887654 222 3468888888888888888874
No 164
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=40.30 E-value=81 Score=27.84 Aligned_cols=63 Identities=21% Similarity=0.170 Sum_probs=38.3
Q ss_pred eeEEecCCCccCCCCeEEEEECCCCCCcccCCCCcEEEEcCC-eecceee-cccccee--eeCCCC-CCCeeEEEEE
Q 003650 366 SITDVSPAWAFSNEKTKILVTGFFHKDCLHLSKSNMFCVCGE-VRVPAEF-VQAGVYR--CFLPPH-SPGLFLLYMS 437 (805)
Q Consensus 366 ~I~d~sP~w~~~~gg~kVlI~G~f~~~~~~~~~~~~~c~FG~-v~Vpa~~-~~~gvLr--C~~Pph-~~G~V~l~v~ 437 (805)
.|.-++|.---..++++|+|.|..|.. .++||. ++|.... ..++-++ -.++.. .||.+.+.+.
T Consensus 3 ~i~aV~P~~lkaG~~t~vti~Gt~L~~---------~v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~vg 70 (81)
T PF09099_consen 3 TILAVSPAGLKAGEETTVTIVGTGLAG---------TVDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRVG 70 (81)
T ss_dssp EEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEET
T ss_pred eEEEECchhccCCCeEEEEEEecCccc---------ceecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEec
Confidence 588999999999999999999999843 266666 4444432 2333222 233333 5677766654
No 165
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=39.55 E-value=99 Score=30.26 Aligned_cols=67 Identities=15% Similarity=0.189 Sum_probs=50.0
Q ss_pred ecCCCccCCCCeEEEEECC-CCCCcccCCCCcEEEEcCC----e-ecceeeccccceeeeCCCC---CCCeeEEEEEeCC
Q 003650 370 VSPAWAFSNEKTKILVTGF-FHKDCLHLSKSNMFCVCGE----V-RVPAEFVQAGVYRCFLPPH---SPGLFLLYMSLDG 440 (805)
Q Consensus 370 ~sP~w~~~~gg~kVlI~G~-f~~~~~~~~~~~~~c~FG~----v-~Vpa~~~~~gvLrC~~Pph---~~G~V~l~v~~~n 440 (805)
+-|+-=.++.. ||.|+=. .+.. .....|.|-. + .+++.+|.+-|++.-+|-. -+|.|.+.|.|++
T Consensus 3 V~P~rI~cg~~-~vfIiL~~~l~~-----~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g 76 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRDPLDE-----EDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDG 76 (142)
T ss_pred ecCceeecCCC-EEEEEEeCCCCC-----CCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECC
Confidence 34666677777 8888743 2211 2356776654 3 5889999999999999999 9999999999987
Q ss_pred CC
Q 003650 441 HK 442 (805)
Q Consensus 441 ~~ 442 (805)
-.
T Consensus 77 ~~ 78 (142)
T PF14545_consen 77 VS 78 (142)
T ss_pred EE
Confidence 54
No 166
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=38.56 E-value=13 Score=30.77 Aligned_cols=9 Identities=44% Similarity=1.032 Sum_probs=5.7
Q ss_pred ccCccceec
Q 003650 76 KDGHNWKKK 84 (805)
Q Consensus 76 ~dg~~w~~~ 84 (805)
.|||.|||=
T Consensus 2 ~Dgy~WRKY 10 (60)
T PF03106_consen 2 DDGYRWRKY 10 (60)
T ss_dssp -SSS-EEEE
T ss_pred CCCCchhhc
Confidence 499999874
No 167
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=37.29 E-value=49 Score=28.34 Aligned_cols=47 Identities=23% Similarity=0.283 Sum_probs=39.4
Q ss_pred chhhHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 003650 605 TALHWAAYYGREKMVVDLLSAGAKPNLVTDPTSQNPGGLNAADIASKKGFDGLAAFLSEQ 664 (805)
Q Consensus 605 TpLh~Aa~~G~~~iV~~LL~~GAd~n~~td~~~~d~~G~TpL~lA~~~g~~~iv~lLle~ 664 (805)
.-|..|...|+.++++.+++.+ .+ ....+..|....+.+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~------------~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KP------------DNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-cc------------HHHHHHHHHHHhhHHHHHHHHHh
Confidence 4578999999999999999765 11 14579999999999999999886
No 168
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=32.09 E-value=18 Score=29.99 Aligned_cols=9 Identities=44% Similarity=1.047 Sum_probs=7.0
Q ss_pred ccCccceec
Q 003650 76 KDGHNWKKK 84 (805)
Q Consensus 76 ~dg~~w~~~ 84 (805)
.|||.|||=
T Consensus 2 ~DGy~WRKY 10 (59)
T smart00774 2 DDGYQWRKY 10 (59)
T ss_pred CCccccccc
Confidence 599999763
No 169
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=23.64 E-value=84 Score=32.70 Aligned_cols=45 Identities=18% Similarity=0.293 Sum_probs=36.2
Q ss_pred CCcEEEEcCCeeccee---eccccceeeeCCCCCCCeeEEEEEeCCCC
Q 003650 398 KSNMFCVCGEVRVPAE---FVQAGVYRCFLPPHSPGLFLLYMSLDGHK 442 (805)
Q Consensus 398 ~~~~~c~FG~v~Vpa~---~~~~gvLrC~~Pph~~G~V~l~v~~~n~~ 442 (805)
-.+.+|-||.+.+--. .+.+|-|||..-|+.+|+..+.=.-.+..
T Consensus 8 ~~~vsVsF~GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKt 55 (249)
T COG4674 8 LDGVSVSFGGFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKT 55 (249)
T ss_pred EeceEEEEcceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccC
Confidence 3458899999887666 38999999999999999998875555544
No 170
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]
Probab=23.10 E-value=1.7e+02 Score=38.22 Aligned_cols=25 Identities=24% Similarity=0.420 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHH
Q 003650 767 MAAAARIQHRFRSWKVRKEFLNMRR 791 (805)
Q Consensus 767 ~~AAv~IQ~~~Rg~~~Rk~f~~~r~ 791 (805)
..+++.||+.+|+++.|+.|..++-
T Consensus 622 ~~~~i~iqs~~r~f~~r~~y~~L~~ 646 (1401)
T KOG2128|consen 622 MTKIIKIQSKIRKFPNRKDYKLLFT 646 (1401)
T ss_pred hhhHHHHHHHHHhcccchHHHHHhc
Confidence 4789999999999999999998875
No 171
>PF01913 FTR: Formylmethanofuran-tetrahydromethanopterin formyltransferase; InterPro: IPR022667 Formylmethanofuran:tetrahyromethanopterin formyltransferase (Ftr) is involved in C1 metabolism in methanogenic archaea, sulphate-reducing archaea and methylotrophic bacteria. It catalyses the following reversible reaction: N-formylmethanofuran + 5,6,7,8-tetrahydromethanopterin = methanofuran + 5-formyl-5,6,7,8-tetrahydromethanopterin Ftr from the thermophilic methanogen Methanopyrus kandleri (optimum growth temperature 98 degrees C) is a hyperthermophilic enzyme that is absolutely dependent on the presence of lyotropic salts for activity and thermostability. The crystal structure of Ftr, determined to a reveals a homotetramer composed essentially of two dimers. Each subunit is subdivided into two tightly associated lobes both consisting of a predominantly antiparallel beta sheet flanked by alpha helices forming an alpha/beta sandwich structure. The approximate location of the active site was detected in a region close to the dimer interface []. Ftr from the mesophilic methanogen Methanosarcina barkeri and the sulphate-reducing archaeon Archaeoglobus fulgidus have a similar structure []. In the methylotrophic bacterium Methylobacterium extorquens, Ftr interacts with three other polypeptides to form an Ftr/cyclohydrolase complex which catalyses the hydrolysis of formyl-tetrahydromethanopterin to formate during growth on C1 substrates [].; GO: 0016740 transferase activity, 0006730 one-carbon metabolic process; PDB: 1M5H_E 1M5S_C 1FTR_C 2FHJ_B 2FHK_D.
Probab=23.02 E-value=34 Score=33.29 Aligned_cols=20 Identities=40% Similarity=0.549 Sum_probs=14.5
Q ss_pred hhhhcccccCccceeccCCCc
Q 003650 69 KMLRNFRKDGHNWKKKKDGKT 89 (805)
Q Consensus 69 ~~~~~~~~dg~~w~~~~~~~~ 89 (805)
+.|||| =|||.|.|+-+|+.
T Consensus 119 ~~lr~F-GDG~q~sk~~~grr 138 (144)
T PF01913_consen 119 KKLRFF-GDGYQISKEIGGRR 138 (144)
T ss_dssp HHHHGG-GTT--EEEEETTEE
T ss_pred ccccCc-cCCceEEEEECCEE
Confidence 468886 69999999998853
No 172
>TIGR03437 Soli_cterm Solibacter uncharacterized C-terminal domain. This model describes a protein domain found in 90 proteins of Solibacter usitatus Ellin6076, nearly always as the C-terminal domain of a much larger protein. No homologs to this domain are detected outside of S. usitatus, a member of the Acidobacteria.
Probab=22.98 E-value=2.5e+02 Score=29.50 Aligned_cols=63 Identities=16% Similarity=0.208 Sum_probs=48.3
Q ss_pred CCeEEEEECCCCCCccc--------CCCCcEEEEcCCeecceeeccccceeeeCCCC-CCCeeEEEEEeCCC
Q 003650 379 EKTKILVTGFFHKDCLH--------LSKSNMFCVCGEVRVPAEFVQAGVYRCFLPPH-SPGLFLLYMSLDGH 441 (805)
Q Consensus 379 gg~kVlI~G~f~~~~~~--------~~~~~~~c~FG~v~Vpa~~~~~gvLrC~~Pph-~~G~V~l~v~~~n~ 441 (805)
-|.=|+|.|+++..... .+-..-++.|+++.+|-..++++=+.+.+|.. .+|.+.+.|...+.
T Consensus 4 PG~~vsIfG~~L~~~t~~~~~~plpt~l~Gv~V~vnG~~APl~yvSp~QIN~qvP~~~~~g~~~v~V~~~g~ 75 (215)
T TIGR03437 4 PGSIVSIFGTNLAPATLTAAGGPLPTSLGGVSVTVNGVAAPLLYVSPGQINAQVPYEVAPGAATVTVTYNGG 75 (215)
T ss_pred CCcEEEEEeccCCCccccccCCCCccccCCeEEEECCEEEEEEEeCcceEEEEeCCCcCCCcEEEEEEeCCc
Confidence 35567788877753210 11245789999999999999999999999987 68999999997654
Done!