Query 003651
Match_columns 805
No_of_seqs 305 out of 1450
Neff 6.3
Searched_HMMs 29240
Date Tue Mar 26 18:45:21 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003651.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1699-1702//hhsearch_pdb/003651hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhm_A Phosphatidylinositol-4, 1.0 1 1 1270.5 53.0 698 9-803 348-1088(1091)
2 2y3a_A Phosphatidylinositol-4, 1.0 1 1 1263.6 56.1 689 9-805 346-1091(1092)
3 2wxf_A Phosphatidylinositol-4, 1.0 1 1 1247.7 59.6 682 9-805 210-939 (940)
4 1e7u_A Phosphatidylinositol 3- 1.0 1 1 1225.0 64.2 683 10-803 212-953 (961)
5 3ls8_A Phosphatidylinositol 3- 1.0 1 1 1164.0 48.7 533 264-798 3-614 (614)
6 2x6h_A GH13170P, VPS34, phosph 1.0 1 1 1151.8 52.1 554 250-805 2-695 (696)
7 1dqv_A Synaptotagmin III; beta 1.0 1 1 40.9 6.0 75 51-129 39-114 (296)
8 3l4c_A Dedicator of cytokinesi 1.0 1 1 40.9 10.8 66 80-146 87-157 (220)
9 1rsy_A Synaptotagmin I; calciu 1.0 1 1 40.6 10.4 76 51-130 61-136 (152)
10 1w15_A Synaptotagmin IV; metal 1.0 1 1 40.2 10.3 92 18-127 32-123 (153)
No 1
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=1.00 E-value=1 Score=1270.45 Aligned_cols=698 Identities=27% Similarity=0.431 Sum_probs=589.0
Q ss_pred EEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 95078898859999832089999999998778788778766779845899999768911236501042358999621131
Q 003651 9 FLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEP 88 (805)
Q Consensus 9 ~~s~dl~~~~~ikI~~LeG~~~~~~~~~l~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~f~~~~~Wnew 88 (805)
...-|++.+++|+|.+..+-+. .....+++||+|+||||+++||.|++|+++++++.. ||||
T Consensus 348 ~slw~~~~~f~v~i~~~~~~n~-----------------~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~-Wne~ 409 (1091)
T 3hhm_A 348 KSLWVINSALRIKILCATYVNV-----------------NIRDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPR-WNEW 409 (1091)
T ss_dssp EEGGGCCSEEEEEEEEESCCCC-----------------CCSSCCCCCEEEEEESSSCSSCCEECCCCCCTTSCE-EEEE
T ss_pred CCHHHCCCCEEEEEEEECCCCC-----------------CCCCCCEEEEEEEEEECCEECCCCEECCCCCCCCCC-CCEE
T ss_conf 1253178877999997358888-----------------755565079999999999875583453556778987-8701
Q ss_pred EEECCCCCCCCCCCCEEEEEEEECCC----CCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 78013435768347068999960699----87224768999732277621223336663048989999998999999988
Q 003651 89 ITLSTKYRDLTAHSQLALTVWDVSCG----KDERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSLPTSTPGKVPKN 164 (805)
Q Consensus 89 l~fpI~~~dLP~~a~L~~ti~~~~~~----~~~~~iG~t~~~LFd~~~~Lr~G~~~L~lwp~~~~d~~~~~~~p~~~~~~ 164 (805)
|+|||+|+||||+|+||||||++..+ ++..++||+|++|||++|+|++|.+.|++||. +|+...
T Consensus 410 l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW~~--~~~~~~---------- 477 (1091)
T 3hhm_A 410 LNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWPV--PHGLED---------- 477 (1091)
T ss_dssp EEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBCTTCBBCCEEEEEECEEC--CTTCCC----------
T ss_pred EEECCCCCCCCHHCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEECCCEEEEEECC--CCCHHH----------
T ss_conf 78067321698324799999972276676666644688523568557818747768886058--765444----------
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 31467999999865310334566213456299999988653114899735999994888830597259988778988667
Q 003651 165 ERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSGANFLLPAPITS 244 (805)
Q Consensus 165 ~~~~~~rl~~l~~~~~~g~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~Iefp~f~~pVvy~~~~~~~~~~~~~~~ 244 (805)
++ ++.|....++ ... .+.+.|+|+.+++||+|++.+... .
T Consensus 478 ----------~~--~p~g~~~~np--------------------~~~-~~~~~l~~~~~~~~v~fp~~~~~~-------~ 517 (1091)
T 3hhm_A 478 ----------LL--NPIGVTGSNP--------------------NKE-TPCLELEFDWFSSVVKFPDMSVIE-------E 517 (1091)
T ss_dssp ----------SC--CTTSCCSCCS--------------------CSS-SCEEEEEECCCSSCEECCCHHHHH-------H
T ss_pred ----------HC--CCCCCCCCCC--------------------CCC-CCCEEEEEECCCCCEEECCCCHHH-------H
T ss_conf ----------23--7544567899--------------------877-762799997489986847841344-------4
Q ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCH
Q ss_conf 77521312887778994178999998520258766689999587998988733899999998889999973586410601
Q 003651 245 TNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKR 324 (805)
Q Consensus 245 ~~~~~~~~d~~~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~r~~L~~i~~~~p~~~L~~~ek~llW~~R~~l~~~~~ 324 (805)
......|++.+..++ ++++ ++..++++||+.+++++|+.|+++||+++|+++||++||+|||++.++|+
T Consensus 518 --~~~~~~~~e~~~~~~----~~~l-----~~~~~~~~k~~~~~~~~L~~i~~~~p~~~Lt~~ek~llW~~R~~l~~~p~ 586 (1091)
T 3hhm_A 518 --HANWSVSREAGFSYS----HAGL-----SNRLARDNELRENDKEQLKAISTRDPLSEITEQEKDFLWSHRHYCVTIPE 586 (1091)
T ss_dssp --HHHHHHHHHTTSCSC----CSSS-----CCC-------CCCGGGGGGTTSSSCTTSCCCHHHHHHHHHTHHHHTTSGG
T ss_pred --HHHHCCCCCCCCCCC----CCCC-----CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHH
T ss_conf --443214632133443----2011-----34444444667578999999964799888999999999987888640816
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 58643134568998879999997425689996345230799999987999999998-20991579998999999862044
Q 003651 325 ALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCIL-ERADDDELQCYLLQLVQALRFER 403 (805)
Q Consensus 325 aL~kfL~sV~W~~~~e~~~a~~lL~~W~~~~~~~aLeLL~~~f~~~~VR~yAV~~L-~~~~d~~L~~yL~QLVQaLkyE~ 403 (805)
||||||+||+|+++.|++||++||..|++++|++|||||++.|+|+.||+|||++| ++++||+|++||||||||||||+
T Consensus 587 aL~k~L~sV~W~~~~e~~e~~~LL~~W~~i~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~~ddeLl~YLlQLVQALKyE~ 666 (1091)
T 3hhm_A 587 ILPKLLLSVKWNSRDEVAQMYCLVKDWPPIKPEQAMELLDCNYPDPMVRGFAVRCLEKYLTDDKLSQYLIQLVQVLKYEQ 666 (1091)
T ss_dssp GHHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHTTSTTCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHGGGGCS
T ss_pred HHHHHHEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 88898632788998999999999855788998899985766689989999999998754888999999999999970143
Q ss_pred CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 54016999999982028102458864432112494034553779999999998419999997405789999999999999
Q 003651 404 SDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQ 483 (805)
Q Consensus 404 ~~~s~La~fLi~ra~~n~~i~~~l~W~L~~e~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~~~~ 483 (805)
+++|+|++|||+||++|++|||+|||||++|++++....|+ ..+++.++.. ++ ..++.+.+|++|+++
T Consensus 667 ~~ds~La~FLl~RAl~n~~igh~lfW~L~~E~~~~~~~~r~----~~lLe~~~~~----~~----~~~~~l~rQ~~~~~~ 734 (1091)
T 3hhm_A 667 YLDNLLVRFLLKKALTNQRIGHFFFWHLKSEMHNKTVSQRF----GLLLESYCRA----CG----MYLKHLNRQVEAMEK 734 (1091)
T ss_dssp SSSCHHHHHHHHHHTTCHHHHHHHHHHHHTTTTCTTTHHHH----HHHHHHHHHH----SC----THHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCHHHHHH----HHHHHHHHHH----CH----HHHHHHHHHHHHHHH
T ss_conf 35548999999998609788888877701102583078999----9999999851----89----999999999999999
Q ss_pred HHHHHHHHCCCC-C-CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCEEEEEEEECC--
Q ss_conf 999998833687-8-805899999999973310246578884358999379998841864000566612899999669--
Q 003651 484 LCSIMRDVGNVR-G-NTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTAS-- 559 (805)
Q Consensus 484 L~~i~~~i~~~~-~-~~~kk~e~L~~~L~~~~~~l~~~~~~~~lPl~p~~~i~~i~~~~~~v~~S~~~Pl~l~f~~~d-- 559 (805)
|.+++..||..+ + ++++|++.|++.|++.... ..+ .++++|+||+++|.+|.+++|+||+|+++|++|+|+++|
T Consensus 735 L~~is~~ik~~~~~~~~~~k~~~L~~~L~~~~~~-~~~-~~~~lPl~P~~~I~~i~~~~~~V~~S~~~P~~L~f~g~D~~ 812 (1091)
T 3hhm_A 735 LINLTDILKQEKKDETQKVQMKFLVEQMRRPDFM-DAL-QGFLSPLNPAHQLGNLRLEECRIMSSAKRPLWLNWENPDIM 812 (1091)
T ss_dssp HHHHHHHTTSTTCCSCHHHHHHHHHHHHHSHHHH-HHS-SSEEETTEEEEEECSBCGGGCEECCSSSCCEEEEECCCSTT
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHH-HCC-CCCCCCCCCCEEEEEEEECEEEEEECCCCCEEEEEECCCCC
T ss_conf 9999999863144433688999999998351101-024-67889999500898986154798621058179999547888
Q ss_pred CCEE----EEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCEEEECCC-CCHHHHC--CC-CCC
Q ss_conf 9903----57998388732579999999999999850799821103269994289860000168-7713110--89-999
Q 003651 560 GGTC----KMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIPS-RSLAQKF--HP-DEH 631 (805)
Q Consensus 560 g~~~----~~IfK~GDDLRQD~lvlQli~lmd~ll~~~~ldl~l~~Y~vi~t~~~~GlIE~V~s-~tl~~~~--~~-~~~ 631 (805)
|+.| .+|||.|||||||++++|+|++||++|+++++|++++||+|+|||+++|+||||++ .|+++.. .. ...
T Consensus 813 G~~y~~~~~~i~K~gDDLRQD~~v~Qli~lmn~il~~~~~dL~l~~Y~Vip~s~~~GlIE~V~ns~Tl~~I~~~~~~~~~ 892 (1091)
T 3hhm_A 813 SELLFQNNEIIFKNGDDLRQDMLTLQIIRIMENIWQNQGLDLRMLPYGCLSIGDCVGLIEVVRNSHTIMQIQCKGGLKGA 892 (1091)
T ss_dssp STTTSCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCEEEEETTEEEEECCSSEEEHHHHHHSCTTTCT
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCC
T ss_conf 76113443279974863318899999999999999857998067622699846987643453872509999986186510
Q ss_pred CCC---------------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCC-----
Q ss_conf 998---------------881899999999988899998765257989996348069988999712113888988-----
Q 003651 632 GPF---------------GITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDGRLFHVDFGYILGRDPKP----- 691 (805)
Q Consensus 632 ~~~---------------~~~~~~~~~F~~S~Agysv~tYiLGIgDRH~dNIli~~~G~lfHIDFG~ilg~~pk~----- 691 (805)
..+ .....+++||++|||||||+||||||||||+|||||+++|++||||||++||++|++
T Consensus 893 ~~f~~~~L~~~f~~~~~~~~~~~ar~nF~~S~A~ysvv~YiLgigDRH~~NILid~tG~v~HIDFG~~f~~~~~~~~~~~ 972 (1091)
T 3hhm_A 893 LQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGIGDRHNSNIMVKDDGQLFHIDFGHFLDHKKKKFGYKR 972 (1091)
T ss_dssp TCCCTTHHHHHHHTTSCTTSHHHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEEEETTSCEEECCCCCCSCC---------
T ss_pred CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEECCCCEEEEEEHHHHCCCCCCCCCCC
T ss_conf 02474679999986087689999999999976424243788760688876469907999898702545403876677776
Q ss_pred CCCCCCCCHHHHHHHC--CCC---CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 8898434398999827--987---60010389999999999971902899999997049999876792468999999709
Q 003651 692 FPPPMKLCKEMVEAMG--GAE---SQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFR 766 (805)
Q Consensus 692 f~~PfrLT~~mv~~mG--g~~---s~~~~~F~~~c~~a~~~LRk~~~lil~L~~lm~~~~ip~~~~~~~~~i~~v~~~l~ 766 (805)
+.+|||||++|+++|| +.+ ++.||.|+.+|+.||.+||+|+++|+++|++|+++++||++..+ ++.++++||+
T Consensus 973 E~vPFrLT~~mv~vmg~G~~~~e~s~~fg~Fr~~c~~a~~~LR~~~~~il~LlelM~~s~lp~~~~~~--~i~~lr~rf~ 1050 (1091)
T 3hhm_A 973 ERVPFVLTQDFLIVISKGAQECTKTREFERFQEMCYKAYLAIRQHANLFINLFSMMLGSGMPELQSFD--DIAYIRKTLA 1050 (1091)
T ss_dssp ---CCCCCHHHHHHSSCSSSCCSSSHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHGGGSCCTTCSSHH--HHHHHHHHSC
T ss_pred CCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHC
T ss_conf 78884327999999825777765552077899999999999986567899999998069997657657--9999999748
Q ss_pred CCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999987-36457999999998741
Q 003651 767 LDLDDEACVHFFQDLINESV-SALFPQMVETIHRWAQY 803 (805)
Q Consensus 767 l~~seeeA~~~f~~lI~~S~-~s~~t~i~~~~H~~aq~ 803 (805)
+++||+||.++|+++|++|+ +++.|++++++|++||.
T Consensus 1051 l~lseeeA~~~f~~~i~~s~~~~~~t~~n~~~H~~a~~ 1088 (1091)
T 3hhm_A 1051 LDKTEQEALEYFMKQMNDARHGGWTTKMDWIFHTIKQH 1088 (1091)
T ss_dssp CSSCHHHHHHHHHHHHHHCCCCCCCSSSCSSSCCC---
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHCC
T ss_conf 99899999999999999998538624335789986023
No 2
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=1.00 E-value=1 Score=1263.63 Aligned_cols=689 Identities=27% Similarity=0.426 Sum_probs=605.1
Q ss_pred EEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 95078898859999832089999999998778788778766779845899999768911236501042358999621131
Q 003651 9 FLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEP 88 (805)
Q Consensus 9 ~~s~dl~~~~~ikI~~LeG~~~~~~~~~l~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~f~~~~~Wnew 88 (805)
..+.|++.+++|+|.++.+- |.+..+++||+|+||||+++||.|++|++++|.+.+.||||
T Consensus 346 ~s~~~~~~~f~i~i~~~~~~-------------------~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnew 406 (1092)
T 2y3a_A 346 SHIWDNNNPFQITLVKGNKL-------------------NTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQ 406 (1092)
T ss_dssp --CCCCCSEEEEEECCCCCC-------------------CCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEE
T ss_pred EEHHHCCCCEEEEEEEECCC-------------------CCCCCCEEEEEEEEEECCEECCCCEECCCCCCCCCCCCCEE
T ss_conf 35110578779999874267-------------------87887449999999999988458366553467788746606
Q ss_pred EEECCCCCCCCCCCCEEEEEEEEC----CC------------------CCCEEEEEEEEEEECCCCCCCCCCEEEEEECC
Q ss_conf 780134357683470689999606----99------------------87224768999732277621223336663048
Q 003651 89 ITLSTKYRDLTAHSQLALTVWDVS----CG------------------KDERLVGGTTILLFNSKMQLKTGKQKLRLWPG 146 (805)
Q Consensus 89 l~fpI~~~dLP~~a~L~~ti~~~~----~~------------------~~~~~iG~t~~~LFd~~~~Lr~G~~~L~lwp~ 146 (805)
|+|||+|+||||+|+||||||++. ++ +...++||+|++|||++|+|++|.+.|++||.
T Consensus 407 l~f~i~~~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~~ 486 (1092)
T 2y3a_A 407 LEFDINICDLPRMARLCFAVYAVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSWSS 486 (1092)
T ss_dssp EEEEEESSSCCTTCEEEEECCCC------------------------------CCEEEEESBCTTCBBCCEEEECCCCTT
T ss_pred EEECCCCCCCCHHCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEC
T ss_conf 99177020699410799999984475566654433443221101124465532678855238875822077868997657
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC-
Q ss_conf 9899999989999999883146799999986531033456621345629999998865311489973599999488883-
Q 003651 147 KEADGSLPTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEH- 225 (805)
Q Consensus 147 ~~~d~~~~~~~p~~~~~~~~~~~~rl~~l~~~~~~g~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~Iefp~f~~- 225 (805)
.++ +.....+|+. .... +++.+++++|+||||.|++
T Consensus 487 ~~~-~~~~~~~p~g----------------------~~~~--------------------~~~~~~~~~L~ief~~~~~~ 523 (1092)
T 2y3a_A 487 FPD-ELEEMLNPMG----------------------TVQT--------------------NPYAENATALHITFPENKKQ 523 (1092)
T ss_dssp CCC-SCCSSSCCSS----------------------CSSC--------------------CSCCTTSCCCEEEECCCSSS
T ss_pred CCC-CCCCCCCCCC----------------------CCCC--------------------CCCCCCCEEEEEEECCCCCC
T ss_conf 765-6555578886----------------------5578--------------------98978746999995556897
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 05972599887789886677752131288777899417899999852025876668999958799898873389999999
Q 003651 226 RVVFQDSGANFLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLS 305 (805)
Q Consensus 226 pVvy~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~r~~L~~i~~~~p~~~L~ 305 (805)
||+|++. +++|+|++++.++ +..++++||+++++++|+.|+.+||++.|+
T Consensus 524 ~V~~~~~---------------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~~i~~~~p~~~L~ 573 (1092)
T 2y3a_A 524 PCYYPPF---------------------------DKIIEKAAELASG---DSANVSSRGGKKFLAVLKEILDRDPLSQLC 573 (1092)
T ss_dssp CCBCCCT---------------------------THHHHHHHHHC--------------CTTHHHHHHTTTTSCTTSCCC
T ss_pred EEEECCC---------------------------CHHHHHHHHHCCC---CCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
T ss_conf 0880694---------------------------0566667775027---765333489989999999998447877899
Q ss_pred HHHHHHHHHHHHHHHCC-CHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
Q ss_conf 88899999735864106-01586431345689988799999974256899963452307999999879999999982099
Q 003651 306 GDEKQLLWKFRFSLMSE-KRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERAD 384 (805)
Q Consensus 306 ~~ek~llW~~R~~l~~~-~~aL~kfL~sV~W~~~~e~~~a~~lL~~W~~~~~~~aLeLL~~~f~~~~VR~yAV~~L~~~~ 384 (805)
++||++||+||+||.++ |+||||||+||+|+++.|++|+++||..|++++|++|||||++.|+|+.||+|||++|++++
T Consensus 574 ~~ek~llW~~R~~~~~~~p~aL~k~l~sv~w~~~~e~~e~~~lL~~W~~i~p~~ALeLL~~~f~d~~VR~yAV~~L~~~~ 653 (1092)
T 2y3a_A 574 ENEMDLIWTLRQDCRENFPQSLPKLLLSIKWNKLEDVAQLQALLQIWPKLPPREALELLDFNYPDQYVREYAVGCLRQMS 653 (1092)
T ss_dssp HHHHHHHHHTHHHHHHHCGGGHHHHHHHSCTTCHHHHHHHHHHHHTSCCCCHHHHGGGGSTTCCCTTHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999719998756807889998416889988999999997058999999999866865899899999999997399
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 15799989999998620445401699999998202810245886443211249403455377999999999841999999
Q 003651 385 DDELQCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDG 464 (805)
Q Consensus 385 d~~L~~yL~QLVQaLkyE~~~~s~La~fLi~ra~~n~~i~~~l~W~L~~e~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 464 (805)
|++|++||||||||||||++++|+|++|||+||++|++|||+|||+|++|++++....+ |..+++.+.... +
T Consensus 654 d~~l~~yLpQLVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~L~~e~~~~~~~~r----~~~lle~~~~~~----~ 725 (1092)
T 2y3a_A 654 DEELSQYLLQLVQVLKYEPFLDCALSRFLLERALDNRRIGQFLFWHLRSEVHTPAVSVQ----FGVILEAYCRGS----V 725 (1092)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSSCHHHHHHHHHHTSCSSHHHHHHHHHHHHHTSHHHHHH----HHHHHHHHHHHT----T
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHEEECCCCCHHHHH----HHHHHHHHHHHC----H
T ss_conf 99999999999999860655656799999999864857789999771222069158999----999999998426----7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCE
Q ss_conf 740578999999999999999999883368--788058999999999733102465788843589993799988418640
Q 003651 465 EDGYKLWQSLVRQTELTAQLCSIMRDVGNV--RGNTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESS 542 (805)
Q Consensus 465 ~~~~~~~~~l~~Q~~~~~~L~~i~~~i~~~--~~~~~kk~e~L~~~L~~~~~~l~~~~~~~~lPl~p~~~i~~i~~~~~~ 542 (805)
..++.+.+|++|+++|++|+..+|.. ++.++++.+.|++.|++... ...+ .++++|++|++.|.+|.+++|+
T Consensus 726 ----~~~~~l~~Q~~~~~~L~~is~~ik~~~~~~~r~k~~e~L~~~l~~~~~-~~~~-~~~~lP~~P~v~I~~~~~~~~~ 799 (1092)
T 2y3a_A 726 ----GHMKVLSKQVEALNKLKTLNSLIKLNAVKLSRAKGKEAMHTCLKQSAY-REAL-SDLQSPLNPCVILSELYVEKCK 799 (1092)
T ss_dssp ----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHSTTH-HHHT-SSSCCSSCSSBCCCCCCGGGCE
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH-HHCC-CCCCCCCCCCEEEEEEECCCEE
T ss_conf ----889999999999999999999985246544378899999998604211-2137-8987899975478888447238
Q ss_pred ECCCCCCEEEEEEEECC--CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCEEEECC-C
Q ss_conf 00566612899999669--99035799838873257999999999999985079982110326999428986000016-8
Q 003651 543 IFKSALHPLRLTFRTAS--GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP-S 619 (805)
Q Consensus 543 v~~S~~~Pl~l~f~~~d--g~~~~~IfK~GDDLRQD~lvlQli~lmd~ll~~~~ldl~l~~Y~vi~t~~~~GlIE~V~-s 619 (805)
||+|+++|++|+|+|+| |+.|++|||.|||||||++++|+|++||.+|+++++|++++||+|+|||+++|+||||+ +
T Consensus 800 V~~S~~~P~rL~~~gsD~~G~~y~~L~K~gDDLRQD~rv~Ql~~lmn~ll~~~~~~L~i~~Y~Vipls~~~GLIE~V~ns 879 (1092)
T 2y3a_A 800 YMDSKMKPLWLVYSSRAFGEDSVGVIFKNGDDLRQDMLTLQMLRLMDLLWKEAGLDLRMLPYGCLATGDRSGLIEVVSTS 879 (1092)
T ss_dssp ECSSTTCCEEEEEECTTTSSSEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCEECCSSSCCEEECCTTC
T ss_pred EECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCEEEECCCC
T ss_conf 80311285699999337788614579844832112489999999999999848988188633489845988857557997
Q ss_pred CCHHHHCCCC----CCCCCC---------------CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEE
Q ss_conf 7713110899----999988---------------818999999999888999987652579899963480699889997
Q 003651 620 RSLAQKFHPD----EHGPFG---------------ITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDGRLFHVD 680 (805)
Q Consensus 620 ~tl~~~~~~~----~~~~~~---------------~~~~~~~~F~~S~Agysv~tYiLGIgDRH~dNIli~~~G~lfHID 680 (805)
.|+++..... ..+.+. ....+++||++|||||||+||||||||||+|||||+++|++||||
T Consensus 880 ~TL~~I~~~~~~~~~~~~f~~~~L~~~~~~~~~~~~~~~ar~nF~~SlA~ySvv~YILGlGDRH~~NILid~tG~v~HID 959 (1092)
T 2y3a_A 880 ETIADIQLNSSNVAATAAFNKDALLNWLKEYNSGDDLDRAIEEFTLSCAGYCVASYVLGIGDRHSDNIMVKKTGQLFHID 959 (1092)
T ss_dssp CBHHHHHSSSCTTTTTSCSSTTHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCTTTEEECTTSCEEECC
T ss_pred CCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEE
T ss_conf 45999998635620221048467999999769888899999999999999999999811778997637893578789984
Q ss_pred ECCCCCCCCC-----CCCCCCCCCHHHHHHHC-C--CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 1211388898-----88898434398999827-9--87600103899999999999719028999999970499998767
Q 003651 681 FGYILGRDPK-----PFPPPMKLCKEMVEAMG-G--AESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIAS 752 (805)
Q Consensus 681 FG~ilg~~pk-----~f~~PfrLT~~mv~~mG-g--~~s~~~~~F~~~c~~a~~~LRk~~~lil~L~~lm~~~~ip~~~~ 752 (805)
||++||+.++ |+++|||||++|+++|| | ..++.||.|+..|+.+|.+||+|++.|++++++|+++++|||+.
T Consensus 960 FG~~f~~~~~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s~~fg~Fr~~c~~a~~~LR~~~~~Il~ll~lml~~~Lp~~~~ 1039 (1092)
T 2y3a_A 960 FGHILGNFKSKFGIKRERVPFILTYDFIHVIQQGKTGNTEKFGRFRQCCEDAYLILRRHGNLFITLFALMLTAGLPELTS 1039 (1092)
T ss_dssp CSCCSSCCCCGGGCCCCCCCCCCCHHHHHHHHTTCSSCSSSTTHHHHHHHHHHHHHHHTHHHHHHHHHHTSTTCCSSCSS
T ss_pred EHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCC
T ss_conf 23344037766888888898047799999970687777754225999999999999868899999999994799953353
Q ss_pred CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHCC
Q ss_conf 9246899999970999999999999999999987-3645799999999874109
Q 003651 753 DPEKGILKLQEKFRLDLDDEACVHFFQDLINESV-SALFPQMVETIHRWAQYWR 805 (805)
Q Consensus 753 ~~~~~i~~v~~~l~l~~seeeA~~~f~~lI~~S~-~s~~t~i~~~~H~~aq~~r 805 (805)
.+ ++.++++||++++||++|.++|+++|++|+ +++.|++++++|++||+-|
T Consensus 1040 ~~--~i~~lr~rf~l~~seeeA~~~~~~~I~~s~~~~~~t~~n~~~H~~~~~~~ 1091 (1092)
T 2y3a_A 1040 VK--DIQYLKDSLALGKSEEEALKQFKQKFDEALRESWTTKVNWMAHTVRKDYR 1091 (1092)
T ss_dssp HH--HHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHSCC------
T ss_pred HH--HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCC
T ss_conf 65--79999986189999999999999999998743730013678898605578
No 3
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=1.00 E-value=1 Score=1247.74 Aligned_cols=682 Identities=28% Similarity=0.459 Sum_probs=594.3
Q ss_pred EEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 95078898859999832089999999998778788778766779845899999768911236501042358999621131
Q 003651 9 FLSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEP 88 (805)
Q Consensus 9 ~~s~dl~~~~~ikI~~LeG~~~~~~~~~l~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~f~~~~~Wnew 88 (805)
..+.|++.+++|+|.++.+- |.+..+++||+|+||||+++||.|++|++++|.+.+.||||
T Consensus 210 ~s~~~~~~~f~i~i~~~~~~-------------------~~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~ 270 (940)
T 2wxf_A 210 VSLWSLEQPFSIELIEGRKV-------------------NADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQR 270 (940)
T ss_dssp --CTTCCSEEEEEEEEEECC-------------------CC---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEE
T ss_pred EEHHHCCCCEEEEEEEECCC-------------------CCCCCCEEEEEEEEEECCEECCCCEECCCCCCCCCCCCCEE
T ss_conf 04312577659999874466-------------------88887469999999989988557155353467777644417
Q ss_pred EEECCCCCCCCCCCCEEEEEEEECCC--C----------CCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 78013435768347068999960699--8----------72247689997322776212233366630489899999989
Q 003651 89 ITLSTKYRDLTAHSQLALTVWDVSCG--K----------DERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSLPTS 156 (805)
Q Consensus 89 l~fpI~~~dLP~~a~L~~ti~~~~~~--~----------~~~~iG~t~~~LFd~~~~Lr~G~~~L~lwp~~~~d~~~~~~ 156 (805)
|+|||+|+||||+|+||||||++.++ + +..++||+|++|||++|+|++|.+.|++||..++ +.....
T Consensus 271 l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~~~~~-~~~~~~ 349 (940)
T 2wxf_A 271 LEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMWPSVPD-EKGELL 349 (940)
T ss_dssp EEEEEEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESBCTTSBBCCEEEEEECEECC-------CC
T ss_pred EECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEECCCC-CCCCCC
T ss_conf 9816613159813579999997047766753212245566513788856578875721067779998417765-654457
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC-EEEEECCCCC
Q ss_conf 999999883146799999986531033456621345629999998865311489973599999488883-0597259988
Q 003651 157 TPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEH-RVVFQDSGAN 235 (805)
Q Consensus 157 ~p~~~~~~~~~~~~rl~~l~~~~~~g~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~Iefp~f~~-pVvy~~~~~~ 235 (805)
+|+. .... +++..++++|+||||.|++ ||+|++.+
T Consensus 350 ~p~g----------------------~~~~--------------------~~~~~~~~~L~ief~~~~~~pV~~~~~~-- 385 (940)
T 2wxf_A 350 NPAG----------------------TVRG--------------------NPNTESAAALVIYLPEVAPHPVYFPALE-- 385 (940)
T ss_dssp CTTS----------------------CSSC--------------------CSCTTTSCEEEEEECCCCC--CBCCCHH--
T ss_pred CCCC----------------------CCCC--------------------CCCCCCCEEEEEEECCCCCCCEECCCCC--
T ss_conf 8886----------------------5578--------------------9887776599999645689857857843--
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 77898866777521312887778994178999998520258766689999587998988733899999998889999973
Q 003651 236 FLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKF 315 (805)
Q Consensus 236 ~~~~~~~~~~~~~~~~~d~~~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~r~~L~~i~~~~p~~~L~~~ek~llW~~ 315 (805)
...+++.|.+++++. ++++++|+.|+++||++.|+++||++||+|
T Consensus 386 --------------------~~~~~~~~~~~~~l~---------------~~~~~~l~~i~~~~p~~~L~~~ek~llW~~ 430 (940)
T 2wxf_A 386 --------------------KILELGRHGERGRIT---------------EEEQLQLREILERRGSGELYEHEKDLVWKM 430 (940)
T ss_dssp --------------------HHHHC-------------------------------CHHHHCC----CCCHHHHHHHHHT
T ss_pred --------------------HHHHCCCCCCCCCCC---------------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf --------------------222063324665689---------------899999999970598545998999999987
Q ss_pred HHHHHCC-CHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 5864106-015864313456899887999999742568999634523079999998799999999820991579998999
Q 003651 316 RFSLMSE-KRALTKFLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQ 394 (805)
Q Consensus 316 R~~l~~~-~~aL~kfL~sV~W~~~~e~~~a~~lL~~W~~~~~~~aLeLL~~~f~~~~VR~yAV~~L~~~~d~~L~~yL~Q 394 (805)
||||.++ |+||||||+||+|+++.|++|+++||..|++++|++|||||++.|+|+.||+|||++|++++|++|++||||
T Consensus 431 R~~~~~~~p~aL~~~l~sv~w~~~~~~~~~~~ll~~W~~~~~~~ALeLL~~~f~d~~Vr~yAv~~L~~~~d~~l~~yL~Q 510 (940)
T 2wxf_A 431 RHEVQEHFPEALARLLLVTKWNKHEDVAQMLYLLCSWPELPVLSALELLDFSFPDCYVGSFAIKSLRKLTDDELFQYLLQ 510 (940)
T ss_dssp HHHHHHHCGGGHHHHHTTSCTTCHHHHHHHHHHHHTCCCCCHHHHHHHTSTTCCCHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 99987558168889880147899899999999970578999999998658758998999999999872998999999999
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf 99986204454016999999982028102458864432112494034553779999999998419999997405789999
Q 003651 395 LVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHAKRFYSTHEILEESMMKLTPGVDGEDGYKLWQSL 474 (805)
Q Consensus 395 LVQaLkyE~~~~s~La~fLi~ra~~n~~i~~~l~W~L~~e~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l 474 (805)
||||||||++++|+|++|||+||+.|+++||+|||+|++|++++....+ |..+++.+.... + ..++.+
T Consensus 511 LVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~~~~~r----~~~ile~~~~~~----~----~~~~~l 578 (940)
T 2wxf_A 511 LVQVLKYESYLDCELTKFLLGRALANRKIGHFLFWHLRSEMHVPSVALR----FGLIMEAYCRGS----T----HHMKVL 578 (940)
T ss_dssp HHHHGGGCSSSSCHHHHHHHHHHHHCHHHHHHHHHHHHTTTTCHHHHHH----HHHHHHHHHHHC----H----HHHHHH
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHEECCCCCHHHHH----HHHHHHHHHHHC----H----HHHHHH
T ss_conf 9999860544655899999999875757789999883103169069999----999999998426----7----889999
Q ss_pred HHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCEEE
Q ss_conf 99999999999999883368--7880589999999997331024657888435899937999884186400056661289
Q 003651 475 VRQTELTAQLCSIMRDVGNV--RGNTQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSIFKSALHPLR 552 (805)
Q Consensus 475 ~~Q~~~~~~L~~i~~~i~~~--~~~~~kk~e~L~~~L~~~~~~l~~~~~~~~lPl~p~~~i~~i~~~~~~v~~S~~~Pl~ 552 (805)
.+|++|+++|++++..+|.. ++.++++.+.|++.|++... ...+ .++++|++|++.|.+|.+++|+||+|+++|++
T Consensus 579 ~~q~~~~~~L~~i~~~ik~~~~~~~r~k~~~~L~~~l~~~~~-~~~~-~~~~lP~~P~~~I~~~~~~~~~V~~S~~~P~~ 656 (940)
T 2wxf_A 579 MKQGEALSKLKALNDFVKVSSQKTTKPQTKEMMHMCMRQETY-MEAL-SHLQSPLDPSTLLEEVCVEQCTFMDSKMKPLW 656 (940)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHTSHHH-HHHH-SSEEETTEEEEEECEECGGGCEECSSTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH-HHCC-CCCCCCCCCCEEEEEECCCCEEECCCCCCCEE
T ss_conf 999999999999999985246533178999999998714112-3306-89878999862577760671488331128749
Q ss_pred EEEEECC---CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCEEEECCC-CCHHHHCCC
Q ss_conf 9999669---990357998388732579999999999999850799821103269994289860000168-771311089
Q 003651 553 LTFRTAS---GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIPS-RSLAQKFHP 628 (805)
Q Consensus 553 l~f~~~d---g~~~~~IfK~GDDLRQD~lvlQli~lmd~ll~~~~ldl~l~~Y~vi~t~~~~GlIE~V~s-~tl~~~~~~ 628 (805)
|+|+++| |+.|++|||.|||||||++++|+|++||.+|+++++|++++||+|+|||+++|+||||++ .|+++....
T Consensus 657 l~~~gsD~~~G~~~~~i~K~gDDLRqD~rv~Ql~~lmn~il~~~~~~L~i~~Y~Vipls~~~GlIE~V~ns~tl~~I~~~ 736 (940)
T 2wxf_A 657 IMYSSEEAGSAGNVGIIFKNGDDLRQDMLTLQMIQLMDVLWKQEGLDLRMTPYGCLPTGDRTGLIEVVLHSDTIANIQLN 736 (940)
T ss_dssp EEEECTTTGGGGCEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEETTEEEEECCSSEEEHHHHHTC
T ss_pred EEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEECCCCCCHHHHHHH
T ss_conf 99983476778632379833754331289999999999999838997189951499823778868677997369999986
Q ss_pred C----CCCCC---------------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCC
Q ss_conf 9----99998---------------8818999999999888999987652579899963480699889997121138889
Q 003651 629 D----EHGPF---------------GITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDGRLFHVDFGYILGRDP 689 (805)
Q Consensus 629 ~----~~~~~---------------~~~~~~~~~F~~S~Agysv~tYiLGIgDRH~dNIli~~~G~lfHIDFG~ilg~~p 689 (805)
. ..+.+ .....+++||++|||||||+||||||||||+|||||+++|++||||||++||+.+
T Consensus 737 ~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~a~~~F~~S~A~~Svv~YILGlgDRH~~NILid~tG~v~HIDFG~~f~~~~ 816 (940)
T 2wxf_A 737 KSNMAATAAFNKDALLNWLKSKNPGEALDRAIEEFTLSCAGYCVATYVLGIGDRHSDNIMIRESGQLFHIDFGHFLGNFK 816 (940)
T ss_dssp CSSSTTCCSSGGGHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHHHHHHTCCCCCGGGEEEETTSCEEECCCCCCTTCC-
T ss_pred HCCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEHHHHCCCC
T ss_conf 16630220258556999999759888899999999998899999999800678984437995588789884133330456
Q ss_pred C-----CCCCCCCCCHHHHHHHC-C--CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 8-----88898434398999827-9--87600103899999999999719028999999970499998767924689999
Q 003651 690 K-----PFPPPMKLCKEMVEAMG-G--AESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKL 761 (805)
Q Consensus 690 k-----~f~~PfrLT~~mv~~mG-g--~~s~~~~~F~~~c~~a~~~LRk~~~lil~L~~lm~~~~ip~~~~~~~~~i~~v 761 (805)
+ |+.+|||||++|+++|| | ..++.||.|+..|+.+|.+||+|++.|++++++|+++++|||+..+ ++.++
T Consensus 817 ~~l~~~pE~VPFRLT~~mv~~mg~g~~~~s~~~g~Fr~~c~~~~~~LR~~~~~ll~ll~lml~~~lp~~~~~~--~i~~l 894 (940)
T 2wxf_A 817 TKFGINRERVPFILTYDFVHVIQQGKTNNSEKFERFRGYCERAYTILRRHGLLFLHLFALMRAAGLPELSCSK--DIQYL 894 (940)
T ss_dssp --------CCCCCCCHHHHHHHTTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHGGGCCTTSCSHH--HHHHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHH
T ss_conf 6568888889814779999997078777774345699999999999986789999999999579995457667--99999
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHCC
Q ss_conf 9970999999999999999999987-3645799999999874109
Q 003651 762 QEKFRLDLDDEACVHFFQDLINESV-SALFPQMVETIHRWAQYWR 805 (805)
Q Consensus 762 ~~~l~l~~seeeA~~~f~~lI~~S~-~s~~t~i~~~~H~~aq~~r 805 (805)
++||++++||++|.++|+++|++|+ +++.|++++++|++||+-|
T Consensus 895 ~~r~~l~~se~ea~~~~~~~i~~s~~~~~~t~~n~~~H~~~~~~~ 939 (940)
T 2wxf_A 895 KDSLALGKTEEEALKHFRVKFNEALRESWKTKVNWLAHNVSKDNR 939 (940)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHHHHCC----------------
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCC
T ss_conf 997189989999999999999999734721112678898605568
No 4
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=1.00 E-value=1 Score=1225.01 Aligned_cols=683 Identities=27% Similarity=0.477 Sum_probs=584.0
Q ss_pred EECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCE
Q ss_conf 50788988599998320899999999987787887787667798458999997689112365010423589996211317
Q 003651 10 LSCDINLPVKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPI 89 (805)
Q Consensus 10 ~s~dl~~~~~ikI~~LeG~~~~~~~~~l~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~f~~~~~Wnewl 89 (805)
.+-|++.+++|+|.+++. +. ++....+++||+|+||||+++||.+ .|++++|++.+.|||||
T Consensus 212 slw~~~~~f~i~i~~~~~--~~---------------~~~~~~~~~~V~~~l~~G~~~l~~~-~t~~~~~~~~~~Wne~l 273 (961)
T 1e7u_A 212 SLWDCDRKFRVKIRGIDI--PV---------------LPRTADLTVFVEANIQYGQQVLCQR-RTSPKPFTEEVLWNVWL 273 (961)
T ss_dssp BCSCCCSEEEEEEEEEEC--SS---------------CCTTSCEEEEEEEEEEETTEEEEEE-ECCCEECCSEEEEEEEE
T ss_pred EEEECCCCEEEEEEECCC--CC---------------CCCCCCCEEEEEEEEEECCEECCCC-EEECCCCCCCCCCCEEE
T ss_conf 531126754999950234--45---------------5677773089999999899883441-12023567776556047
Q ss_pred EECCCCCCCCCCCCEEEEEEEECCCC----------------CCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 80134357683470689999606998----------------72247689997322776212233366630489899999
Q 003651 90 TLSTKYRDLTAHSQLALTVWDVSCGK----------------DERLVGGTTILLFNSKMQLKTGKQKLRLWPGKEADGSL 153 (805)
Q Consensus 90 ~fpI~~~dLP~~a~L~~ti~~~~~~~----------------~~~~iG~t~~~LFd~~~~Lr~G~~~L~lwp~~~~d~~~ 153 (805)
+|||+|+||||+|+||||||++.+++ +..++||+|++|||+++.|++|.+.|++||..++++..
T Consensus 274 ~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~l~~G~~~L~lw~~~~~~~~~ 353 (961)
T 1e7u_A 274 EFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFLLRHGEYVLHMWQLSGKGEDQ 353 (961)
T ss_dssp EEEEEGGGCCTTCEEEEEEEEEEC--------------------CEEEEEEEESBCTTSBBCCEEEEEECEECCSCC---
T ss_pred EECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCC
T ss_conf 70650205980137999999504675555565444332234663157888466654788222578899875476554533
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCC
Q ss_conf 98999999988314679999998653103345662134562999999886531148997359999948888305972599
Q 003651 154 PTSTPGKVPKNERGELERLEKLINKYEREQIQRVDWLDRLTFKALEKIKEQENFRNGNSYLYLVVDFGRLEHRVVFQDSG 233 (805)
Q Consensus 154 ~~~~p~~~~~~~~~~~~rl~~l~~~~~~g~~~~~~wlD~l~~~~i~~~~~~~~~~~~~~~~~L~Iefp~f~~pVvy~~~~ 233 (805)
.+-.|. .|... ..+..++.+.|+||||+|++||+|++.+
T Consensus 354 ~~~~~~---------------------~~~~~--------------------~~p~~~~~~~l~ie~~~~~~~v~~p~~~ 392 (961)
T 1e7u_A 354 GSFNAD---------------------KLTSA--------------------TNPDKENSMSISILLDNYCHPIALPKHR 392 (961)
T ss_dssp --CCGG---------------------GGCCC--------------------CCSCTTTSCEEEEEECCSSCBBCCCCCC
T ss_pred CCCCCC---------------------CCCCC--------------------CCCCCCCCEEEEEEECCCCCCEEECCCC
T ss_conf 433555---------------------67676--------------------8988777748999964788865636765
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 88778988667775213128877789941789999985202587666899995879989887338999999988899999
Q 003651 234 ANFLLPAPITSTNELVIVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLW 313 (805)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~d~~~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~r~~L~~i~~~~p~~~L~~~ek~llW 313 (805)
..+|++.. ..+++|+++++++|+.|+.+||++.|+++||++||
T Consensus 393 ----------------~~~~~~~~---------------------~~~~~~~~~~~~~l~~i~~~~p~~~L~~~ek~llW 435 (961)
T 1e7u_A 393 ----------------PTPDPEGD---------------------RVRAEMPNQLRKQLEAIIATDPLNPLTAEDKELLW 435 (961)
T ss_dssp ----------------CC-----C---------------------CCCCCCCHHHHHHHHHHHTSCTTSCCCHHHHHHHH
T ss_pred ----------------CCCCCCCC---------------------CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf ----------------55661113---------------------45567898999999999715766789999999999
Q ss_pred HHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHCC---C--CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf 7358641060158643134568998879999997425---6--8999634523079999998799999999820991579
Q 003651 314 KFRFSLMSEKRALTKFLRSVEWSDVQEAKQALELMGR---W--EMIDVCDALELLSPVFESEEVRAYAVCILERADDDEL 388 (805)
Q Consensus 314 ~~R~~l~~~~~aL~kfL~sV~W~~~~e~~~a~~lL~~---W--~~~~~~~aLeLL~~~f~~~~VR~yAV~~L~~~~d~~L 388 (805)
+||+||.++|+||||||+||+|+++.+++||++||.. | ++++|++|||||++.|+|+.||+|||++|++++|++|
T Consensus 436 ~~R~~~~~~p~aL~k~l~sv~w~~~~~v~e~~~lL~~~~~W~~~~~~~~~ALeLL~~~f~d~~VR~yAV~~L~~~~d~~l 515 (961)
T 1e7u_A 436 HFRYESLKDPKAYPKLFSSVKWGQQEIVAKTYQLLAKREVWDQSALDVGLTMQLLDCNFSDENVRAIAVQKLESLEDDDV 515 (961)
T ss_dssp HTHHHHTTCGGGHHHHHTSSCTTCHHHHHHHHHHHHCCHHHHHSCCCHHHHHHTTSTTCCCHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHCCHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHH
T ss_conf 87998733847887875456789989999999987336777788989999998568768997899999999982999999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 998999999862044540169999999820281024588644321124-9403455377999999999841999999740
Q 003651 389 QCYLLQLVQALRFERSDKSRLSQFLVQRSSHNIELASFLRWYVSVEFH-DPVHAKRFYSTHEILEESMMKLTPGVDGEDG 467 (805)
Q Consensus 389 ~~yL~QLVQaLkyE~~~~s~La~fLi~ra~~n~~i~~~l~W~L~~e~~-~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~ 467 (805)
++||||||||||||++++|+|++|||+||+.|++|||+|||+|++|++ ++.+..| |..+++.++. ++ +
T Consensus 516 ~~YL~QLVQaLkyE~~~~s~L~~fLl~ra~~n~~i~h~l~W~l~~e~~~~~~~~~r----~~~ll~~~l~---~~----~ 584 (961)
T 1e7u_A 516 LHYLLQLVQAVKFEPYHDSALARFLLKRGLRNKRIGHFLFWFLRSEIAQSRHYQQR----FAVILEAYLR---GC----G 584 (961)
T ss_dssp HHHHHHHHHHGGGCSSSSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCTTTHHH----HHHHHHHHHT---TS----C
T ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH----HHHHHHHHHH---HC----C
T ss_conf 99999999998533346776999999998618377899998855231578668999----9999999986---44----2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCEE
Q ss_conf 578999999999999999999883368788----0589999999997331024657888435899937999884186400
Q 003651 468 YKLWQSLVRQTELTAQLCSIMRDVGNVRGN----TQKKIEKLRQLLSGLLSELTYFEEPIRSPLAPNILITGIVPSESSI 543 (805)
Q Consensus 468 ~~~~~~l~~Q~~~~~~L~~i~~~i~~~~~~----~~kk~e~L~~~L~~~~~~l~~~~~~~~lPl~p~~~i~~i~~~~~~v 543 (805)
..+++.+.+|++++++|.+++..||..++. .+++.+.+++.|++. .+. .++..+.+|++|++.|.++.+++|+|
T Consensus 585 ~~~~~~~~~q~~~~~~L~~i~~~ik~~~~~~~~~~~~~~~~l~~~L~~l-~~i-~vP~~~~lP~dP~v~i~~i~~~~~~V 662 (961)
T 1e7u_A 585 TAMLHDFTQQVQVIDMLQKVTIDIKSLSAEKYDVSSQVISQLKQKLENL-QNL-NLPQSFRVPYDPGLKAGALVIEKCKV 662 (961)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSGGGGCCSSCCCHHHHHHHHHHHHHH-HHT-TSCSCEEETTEEEEEEEEECGGGCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH-HCC-CCCCCCCCCCCCCEEEEEEECCEEEE
T ss_conf 9899999999999999999999987640000231166799999999864-207-58987657999954898763343798
Q ss_pred CCCCCCEEEEEEEECCCC-----EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEEECCCCCEEEECC
Q ss_conf 056661289999966999-----035799838873257999999999999985079982110326999428986000016
Q 003651 544 FKSALHPLRLTFRTASGG-----TCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPYNVLATGQDEGLLEFIP 618 (805)
Q Consensus 544 ~~S~~~Pl~l~f~~~dg~-----~~~~IfK~GDDLRQD~lvlQli~lmd~ll~~~~ldl~l~~Y~vi~t~~~~GlIE~V~ 618 (805)
|+|+++|++|+|+++||. .|.+|||.|||||||++++|+|++||.+|+++++|++++||+|+|||+++|+||||+
T Consensus 663 ~~S~~~P~~l~~~g~Dg~~~~~~~~~~i~K~gDDLRQD~~v~Ql~~lmn~il~~~~~~L~i~~Y~Vipls~~~GlIE~V~ 742 (961)
T 1e7u_A 663 MASKKKPLWLEFKCADPTALSNETIGIIFKHGDDLRQDMLILQILRIMESIWETESLDLCLLPYGCISTGDKIGMIEIVK 742 (961)
T ss_dssp CSSTTCCEEEEEEESCTTCSCCCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCEEEEETTEEEEECCS
T ss_pred ECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEEECC
T ss_conf 50257956999972687756677523898458544343649999999999986358882888304998778877577659
Q ss_pred C-CCHHHH--CCCCCCCCCC----------------CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEE
Q ss_conf 8-771311--0899999988----------------81899999999988899998765257989996348069988999
Q 003651 619 S-RSLAQK--FHPDEHGPFG----------------ITATCLETFIKSCAGYSVITYILGIGDRHLDNLLLRDDGRLFHV 679 (805)
Q Consensus 619 s-~tl~~~--~~~~~~~~~~----------------~~~~~~~~F~~S~Agysv~tYiLGIgDRH~dNIli~~~G~lfHI 679 (805)
+ .|+++. ......+.+. ....+++||++|||||||+||||||||||+|||||+++|++|||
T Consensus 743 ns~tl~~I~~~~~g~~~~f~~~~L~~w~~~~~~~~~~~~~ar~~F~~S~A~ySvv~YILGigDRH~~NILid~tG~v~HI 822 (961)
T 1e7u_A 743 DATTIAKIQQSTVGNTGAFKDEVLSHWLKEKCPIEEKFQAAVERFVYSCAGYCVATFVLGIGDRHNDNIMISETGNLFHI 822 (961)
T ss_dssp SEEEHHHHHHHHSCSSSCCCSSHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEETTCCEEEC
T ss_pred CCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEE
T ss_conf 97469999985367522244168999999859986899999999999889998998970055788765688357778988
Q ss_pred EECCCCCCCCC-----CCCCCCCCCHHHHHHHCCC---CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 71211388898-----8889843439899982798---760010389999999999971902899999997049999876
Q 003651 680 DFGYILGRDPK-----PFPPPMKLCKEMVEAMGGA---ESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIA 751 (805)
Q Consensus 680 DFG~ilg~~pk-----~f~~PfrLT~~mv~~mGg~---~s~~~~~F~~~c~~a~~~LRk~~~lil~L~~lm~~~~ip~~~ 751 (805)
|||++||+.++ |+++|||||++|+++||+. +|+.||.|+..|+.+|.+||+|++.|++++++|+++++|||+
T Consensus 823 DFG~~f~~~~~~l~~~pE~vPFRLT~~mv~~mG~~g~e~s~~fg~F~~~c~~~~~~LR~~~~~l~~ll~lm~~~~lp~~~ 902 (961)
T 1e7u_A 823 DFGHILGNYKSFLGINKERVPFVLTPDFLFVMGTSGKKTSLHFQKFQDVCVKAYLALRHHTNLLIILFSMMLMTGMPQLT 902 (961)
T ss_dssp CCCCC----------CCCCCSSCCCHHHHHHTTCCSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSCSSCC
T ss_pred EEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 53343246865567788889842479999985656776645278999999999999997589999999998469997658
Q ss_pred CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHH
Q ss_conf 792468999999709999999999999999999873-6457999999998741
Q 003651 752 SDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVS-ALFPQMVETIHRWAQY 803 (805)
Q Consensus 752 ~~~~~~i~~v~~~l~l~~seeeA~~~f~~lI~~S~~-s~~t~i~~~~H~~aq~ 803 (805)
..+ ++.+++++|++++||++|.++|.++|++|.+ ++.++++.++|.+|+.
T Consensus 903 ~~~--~i~~lr~rf~l~~se~eA~~~~~~lI~~s~~~~~t~~~n~~~h~~~gi 953 (961)
T 1e7u_A 903 SKE--DIEYIRDALTVGKSEEDAKKYFLDQIEVCRDKGWTVQFNWFLHLVLGI 953 (961)
T ss_dssp CHH--HHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTTCC
T ss_pred CHH--HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHH
T ss_conf 658--999999974799999999999999999997268758743599998751
No 5
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=1.00 E-value=1 Score=1163.97 Aligned_cols=533 Identities=51% Similarity=0.847 Sum_probs=501.8
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHH
Q ss_conf 89999985202587666899995879989887338999999988899999735864106015864313456899887999
Q 003651 264 HKQLKLARSLTRGIIDRDLKPSNAERKSIQRILKYPPTRTLSGDEKQLLWKFRFSLMSEKRALTKFLRSVEWSDVQEAKQ 343 (805)
Q Consensus 264 ~k~~~l~rs~~~~~~d~~lkp~~~~r~~L~~i~~~~p~~~L~~~ek~llW~~R~~l~~~~~aL~kfL~sV~W~~~~e~~~ 343 (805)
.|||||+||+|+|++|+|+|||+++|++|+.|+++||+.+|+++||+++|+|||||.++|+||||||+||+|+++.|++|
T Consensus 3 ~k~~~l~rs~~~~~~d~~lkP~~~~r~~L~~I~~~~p~~~Lt~~ek~llWk~R~~l~~~~~aL~kfL~sV~W~~~~e~~~ 82 (614)
T 3ls8_A 3 SKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLPQEAKQ 82 (614)
T ss_dssp --------------CGGGCCCCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHTHHHHTTCGGGHHHHHTTCCTTSHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHH
T ss_conf 78888987333789987889598999999999648999889999999999999998438267888852289999899999
Q ss_pred HHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC-----------------
Q ss_conf 999742568999634523079999998799999999820991579998999999862044540-----------------
Q 003651 344 ALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRFERSDK----------------- 406 (805)
Q Consensus 344 a~~lL~~W~~~~~~~aLeLL~~~f~~~~VR~yAV~~L~~~~d~~L~~yL~QLVQaLkyE~~~~----------------- 406 (805)
|++||..|+|++|+||||||+++|+|+.||+|||+||++++||||++||||||||||||++++
T Consensus 83 a~~LL~~W~~i~~~dALELL~~~f~d~~VR~yAV~~L~~~~D~eL~lYLlQLVQALKyE~~~~~~~~~~~~~~~~~~~~~ 162 (614)
T 3ls8_A 83 ALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDSQSSVS 162 (614)
T ss_dssp HHHHHHHSCCCCHHHHGGGGSTTCCCHHHHHHHHHHHTTSCHHHHHHTHHHHHHHGGGSCHHHHHHTC------------
T ss_pred HHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99998507889988998747666898899999999997289689999999877764203323211012321112234432
Q ss_pred ---------------------------------------------HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf ---------------------------------------------16999999982028102458864432112494034
Q 003651 407 ---------------------------------------------SRLSQFLVQRSSHNIELASFLRWYVSVEFHDPVHA 441 (805)
Q Consensus 407 ---------------------------------------------s~La~fLi~ra~~n~~i~~~l~W~L~~e~~~~~~~ 441 (805)
|+||+|||+||++|++|||+|||||++|++++...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~La~FLi~RAl~n~~ig~~lyW~L~~E~~~~~~~ 242 (614)
T 3ls8_A 163 ENVSNSGINSAEIDSSQIITSPLPSVSSPPPASKTKEVPDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQ 242 (614)
T ss_dssp ------------CCGGGSTTCCCCC-------------------CCCHHHHHHHHHHTCHHHHHHHHHHHHHHHHCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCC
T ss_conf 22344433222233221112333333345521012222224446783899999987348888877776602323575322
Q ss_pred ---HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-CCCC
Q ss_conf ---553779999999998419999997405789999999999999999998833687880589999999997331-0246
Q 003651 442 ---KRFYSTHEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKLRQLLSGLL-SELT 517 (805)
Q Consensus 442 ---~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~~~~L~~i~~~i~~~~~~~~kk~e~L~~~L~~~~-~~l~ 517 (805)
..+..+|..+++.++..+..+++. ...+++.|.+|++|+++|.++++.|+..++++.+|+++|+++|++.. .++.
T Consensus 243 ~~~~~~~~~Y~~vl~~~l~~l~~g~~~-~~~~r~~L~~Q~~~~~~L~~l~~~v~~~~~~~~kk~e~L~~~L~~~~~~~l~ 321 (614)
T 3ls8_A 243 QRDPKTHEMYLNVMRRFSQALLKGDKS-VRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLS 321 (614)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHSCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHCHHHHCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHCCCC
T ss_conf 112278899999999999998726814-6899999999999999999999999850243688999999997150010124
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCEECCCCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 57888435899937999884186400056661289999966999035799838873257999999999999985079982
Q 003651 518 YFEEPIRSPLAPNILITGIVPSESSIFKSALHPLRLTFRTASGGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDL 597 (805)
Q Consensus 518 ~~~~~~~lPl~p~~~i~~i~~~~~~v~~S~~~Pl~l~f~~~dg~~~~~IfK~GDDLRQD~lvlQli~lmd~ll~~~~ldl 597 (805)
.+ +++++|+||++.|.+|.+++|+||+|+++|++|+|+|+||..|.+|||.|||||||++++|+|++||++|+++++|+
T Consensus 322 ~~-~~~~lPl~P~v~I~~i~p~~~~V~~Sk~~P~~l~~~gsDG~~y~~i~K~gDDLRQD~~~~Ql~~l~n~il~~~~ldL 400 (614)
T 3ls8_A 322 DV-ELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDL 400 (614)
T ss_dssp SC-SSEEETTEEEEEEEEECGGGCEECSSTTCCEEEEEEETTSCEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CC-CCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 57-88789999866999996580688511468279999926998877887438851398999999999999999669984
Q ss_pred EECCCEEEEECCCCCEEEECCCCCHHH-------------HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 110326999428986000016877131-------------1089999998881899999999988899998765257989
Q 003651 598 HLTPYNVLATGQDEGLLEFIPSRSLAQ-------------KFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDRH 664 (805)
Q Consensus 598 ~l~~Y~vi~t~~~~GlIE~V~s~tl~~-------------~~~~~~~~~~~~~~~~~~~F~~S~Agysv~tYiLGIgDRH 664 (805)
+++||+|+|||+++|+||||++.|+++ +++++..+++++.+++++||++|||||||+||||||||||
T Consensus 401 ~i~~Y~Vipls~~~GlIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGigDRH 480 (614)
T 3ls8_A 401 KLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRH 480 (614)
T ss_dssp CCCCCCEEESSSSEEEEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred EEECCEEEEECCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCC
T ss_conf 45410799945987658871786589998705869999998588866654455999999999877776751032346888
Q ss_pred CCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
Q ss_conf 99634806998899971211388898888984343989998279876001038999999999997190289999999704
Q 003651 665 LDNLLLRDDGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAG 744 (805)
Q Consensus 665 ~dNIli~~~G~lfHIDFG~ilg~~pk~f~~PfrLT~~mv~~mGg~~s~~~~~F~~~c~~a~~~LRk~~~lil~L~~lm~~ 744 (805)
+|||||+++|++||||||++||++|+|++||||||++|+++|||.+++.|+.|+..|+.+|.+||+|+++|++++++|++
T Consensus 481 ~~NILld~tG~v~HIDFG~~f~~~p~pe~vPFRLT~~mv~~mG~~~~e~f~~Fr~~c~~~~~~LR~~~~~il~l~~lM~~ 560 (614)
T 3ls8_A 481 LDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVD 560 (614)
T ss_dssp TTSEEECTTSCEEECCCSSCTTCCSSSSCCSSCCCHHHHHHTTCTTSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTTT
T ss_pred CCCEEECCCCCEEEEEHHHHHCCCCCCCCCCEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
T ss_conf 76666737898866411776535887788874348999998399887218899999999999998777899999999705
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 999987679246899999970999999999999999999987364579999999
Q 003651 745 SNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIH 798 (805)
Q Consensus 745 ~~ip~~~~~~~~~i~~v~~~l~l~~seeeA~~~f~~lI~~S~~s~~t~i~~~~H 798 (805)
+++||++..++++|.++++||++++||+||.++|+++|++|++|++|+++|.+|
T Consensus 561 s~lp~~~~~~~~~i~~l~~rf~l~lse~ea~~~~~~lI~~S~~s~~~~~~d~~h 614 (614)
T 3ls8_A 561 ANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIH 614 (614)
T ss_dssp SCCHHHHTSGGGHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHC--------
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 999744557589999999973899999999999999999988504998888519
No 6
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=1.00 E-value=1 Score=1151.82 Aligned_cols=554 Identities=48% Similarity=0.823 Sum_probs=520.7
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 312887778994178999998520258766689999587998988733-8999999988899999735864106015864
Q 003651 250 IVWDPEVGKINPSEHKQLKLARSLTRGIIDRDLKPSNAERKSIQRILK-YPPTRTLSGDEKQLLWKFRFSLMSEKRALTK 328 (805)
Q Consensus 250 ~~~d~~~~~~n~~e~k~~~l~rs~~~~~~d~~lkp~~~~r~~L~~i~~-~~p~~~L~~~ek~llW~~R~~l~~~~~aL~k 328 (805)
.++|||+.++||+|.|||+|+||+++|..|+|+|||+++|++|+.|+. +||++.|+++||++||+|||||+++|+||||
T Consensus 2 ~~~d~~~~~~n~~e~k~~~l~r~~~~~~~d~~lkP~~~~r~~L~~i~~r~~p~~~Lt~eek~llWk~R~~l~~~~~aL~k 81 (696)
T 2x6h_A 2 SHMDSEIQMENLVERKHHRLARSERSGISDRDAKPTASIRDQLHTIVYRYPPTYVLSSEEQDLVWKFRFYLSSHKKALTK 81 (696)
T ss_dssp ------------------------------------CTTHHHHHHHHHHSCSSCCCCSSHHHHHHHHHTTCCCCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf 97870116788589999997653015888756797989999999999608997769999999999729998418068889
Q ss_pred HHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC-----
Q ss_conf 313456899887999999742568999634523079999998799999999820991579998999999862044-----
Q 003651 329 FLRSVEWSDVQEAKQALELMGRWEMIDVCDALELLSPVFESEEVRAYAVCILERADDDELQCYLLQLVQALRFER----- 403 (805)
Q Consensus 329 fL~sV~W~~~~e~~~a~~lL~~W~~~~~~~aLeLL~~~f~~~~VR~yAV~~L~~~~d~~L~~yL~QLVQaLkyE~----- 403 (805)
||+||+|+++.|++||++||..|+|++|+||||||++.|+|+.||+|||+||++++||+|++||||||||||||.
T Consensus 82 fL~sv~W~~~~e~~~a~~lL~~W~~~~~~dALeLL~~~f~~~~VR~yAV~~L~~~~de~L~~YLlQLVQALKyE~~~~~~ 161 (696)
T 2x6h_A 82 FLKCINWKLEDEVTQALWMLANWAPMDVEDALELLSPTFTHPQVRKYAVSRLAQAPDEDLLLYLLQLVQALKYEDPRHIV 161 (696)
T ss_dssp HGGGTTTSCHHHHHHHHHHHHHSCCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHGGGSCHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHC
T ss_conf 99437899989999999998468899999999870643799899999999997189689999999999999704522211
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003651 404 -------------------------------------------------------------------------------- 403 (805)
Q Consensus 404 -------------------------------------------------------------------------------- 403 (805)
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (696)
T 2x6h_A 162 HLHGCIFPERDVVRSILDDNGSLLDQSSLSDLSATSSGLHASVIPANQRAASVLAAIKSDKSVSPGSAGGSGSGGQGSVA 241 (696)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23332000000000112221000001111233322334332233210001111012233222334445554444323234
Q ss_pred --------------------------CC-------CHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC-CHHH---HHHHH
Q ss_conf --------------------------54-------01699999998202810245886443211249-4034---55377
Q 003651 404 --------------------------SD-------KSRLSQFLVQRSSHNIELASFLRWYVSVEFHD-PVHA---KRFYS 446 (805)
Q Consensus 404 --------------------------~~-------~s~La~fLi~ra~~n~~i~~~l~W~L~~e~~~-~~~~---~~~~~ 446 (805)
++ +++|++|||+||++|++|||+|||||++|+++ +... ..+..
T Consensus 242 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~La~FLl~rA~~n~~i~h~l~W~L~~e~~~~~~~~~~~~~~~~ 321 (696)
T 2x6h_A 242 LPNPSAPATPGSSSLPCDSNSNALMLAEGISFGSVPANLCTFLIQRACTNATLANYFYWYLSIEVEEVESVRKQDERAHD 321 (696)
T ss_dssp -------------------------------------CHHHHHHHHHTTCHHHHHHHHHHHHHHHCC-----CCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 66544433334445664433322232100135556777999999998528666899998757123476311211306899
Q ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH---HCCCCCCCCCC
Q ss_conf 999999999841999999740578999999999999999999883368788058999999999733---10246578884
Q 003651 447 THEILEESMMKLTPGVDGEDGYKLWQSLVRQTELTAQLCSIMRDVGNVRGNTQKKIEKLRQLLSGL---LSELTYFEEPI 523 (805)
Q Consensus 447 ~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~Q~~~~~~L~~i~~~i~~~~~~~~kk~e~L~~~L~~~---~~~l~~~~~~~ 523 (805)
+|..+++.++..+.+++ ..|.++++.+.+|++|+++|++|++.++..++++.+|+++|++.|++. +.++..++ ++
T Consensus 322 ~~~~il~~~l~~l~~g~-~~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~~~~~~~k~e~L~~~L~~~~~~~~~l~~~~-~~ 399 (696)
T 2x6h_A 322 MYAMVLKMFLKVLENGN-FNLRGIFYNLRKQRRFIDELVKLVKLVAKEPGNRNKKTEKFQKLLAEQDMFKVNFTNFE-PI 399 (696)
T ss_dssp HHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHSTTSSSSCTTSCC-CE
T ss_pred HHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCC-CC
T ss_conf 99999999999863347-53189999999999999999999998711686378899999998532111000102378-75
Q ss_pred CCCCCCCEEEEEEECCCCEECCCCCCEEEEEEEECC-CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCC
Q ss_conf 358999379998841864000566612899999669-9903579983887325799999999999998507998211032
Q 003651 524 RSPLAPNILITGIVPSESSIFKSALHPLRLTFRTAS-GGTCKMIFKKGDDIRQDQLVVQMVSLMDRLLKLENLDLHLTPY 602 (805)
Q Consensus 524 ~lPl~p~~~i~~i~~~~~~v~~S~~~Pl~l~f~~~d-g~~~~~IfK~GDDLRQD~lvlQli~lmd~ll~~~~ldl~l~~Y 602 (805)
++|++|.+.|.+|.++.|+||+|+++|++|+|+++| |+.|.+|||.|||||||++++|+|++||.+|++++++++++||
T Consensus 400 ~lP~~p~v~I~~~~~~~~~V~~S~~~P~~l~~~gsD~G~~y~~i~K~gDDLRQD~rv~Ql~~lmn~il~~~~~~L~i~~Y 479 (696)
T 2x6h_A 400 PFPLDPEIYITKIVPMRTSLFKSALMPAKLTFVTSIAHHEYAAIFKHGDDLRQDQLILQMITLMDKLLRRENLDLKLTPY 479 (696)
T ss_dssp ECSSCTTSEEEEECGGGCEECSSSSCCEEEEEEETTTTCEEEEEEECSSCTHHHHHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred CCCCCCCEEEEEEECCEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECC
T ss_conf 67999876999994371798330469748999963788704578743765421689999999999999847998377530
Q ss_pred EEEEECCCCCEEEECCCCCHHH-------------HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
Q ss_conf 6999428986000016877131-------------108999999888189999999998889999876525798999634
Q 003651 603 NVLATGQDEGLLEFIPSRSLAQ-------------KFHPDEHGPFGITATCLETFIKSCAGYSVITYILGIGDRHLDNLL 669 (805)
Q Consensus 603 ~vi~t~~~~GlIE~V~s~tl~~-------------~~~~~~~~~~~~~~~~~~~F~~S~Agysv~tYiLGIgDRH~dNIl 669 (805)
+|+|||+++|+||||++.|+++ +.+|+...++++..++++||++|||+|||+||||||||||++|||
T Consensus 480 ~Vipls~~~GLIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGlGDRH~~NIL 559 (696)
T 2x6h_A 480 KVLATSSKHGFLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNLL 559 (696)
T ss_dssp CEEESSTTCEEEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEE
T ss_pred EEEECCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 79963677872345797559999870670999999878896201242799999999999999999998348889976568
Q ss_pred ECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
Q ss_conf 80699889997121138889888898434398999827987600103899999999999719028999999970499998
Q 003651 670 LRDDGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAESQYYTRFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPD 749 (805)
Q Consensus 670 i~~~G~lfHIDFG~ilg~~pk~f~~PfrLT~~mv~~mGg~~s~~~~~F~~~c~~a~~~LRk~~~lil~L~~lm~~~~ip~ 749 (805)
|+++|++||||||++||++|+||+||||||++|+++|||.+++.|+.|+..|+.+|.+||+|++.|++++++|+++++||
T Consensus 560 id~tG~v~HIDFG~~f~~~p~pe~VPFRLT~~mv~~mG~~g~eg~~~Fr~~c~~~~~~LR~~~~~il~ll~lml~~~lp~ 639 (696)
T 2x6h_A 560 LTTNGKLFHIDFGYILGRDPKPMPPPMKLSKEMVEAMGGISSEHHHEFRKQCYTAYLHLRRHANVMLNLFSLMVDATVPD 639 (696)
T ss_dssp ECTTSCEEECCCCSCTTCCSSSCCCSSCCCHHHHHHTTSSSSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTCCCTT
T ss_pred EECCCCEEEEEEHHHHCCCCCCCCCCEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC
T ss_conf 80789989885345536688776798631799999838977610899999999999999867899999999997589975
Q ss_pred CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
Q ss_conf 76792468999999709999999999999999999873645799999999874109
Q 003651 750 IASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 805 (805)
Q Consensus 750 ~~~~~~~~i~~v~~~l~l~~seeeA~~~f~~lI~~S~~s~~t~i~~~~H~~aq~~r 805 (805)
|+..++.+|.++++||+++++|++|.++|+++|++|+++++|+++|++|+||||||
T Consensus 640 ~~~~~~~~i~~l~~rf~l~lseeea~~~~~~lI~~S~~s~~t~~~d~~h~~aq~~r 695 (696)
T 2x6h_A 640 IALEPDKAVKKVEENLQLGLTDEEAVQHLQSLLDVSITAVMPALVEQIHRFTQYWR 695 (696)
T ss_dssp TTSSGGGHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 46687899999999837999999999999999999985344889999999999963
No 7
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=1.00 E-value=1 Score=40.94 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=54.8
Q ss_pred CCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEE-EEC
Q ss_conf 7984589999976891123650104235899962113178013435768347068999960699872247689997-322
Q 003651 51 RRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTIL-LFN 129 (805)
Q Consensus 51 ~~~~l~V~~~l~~~~~~l~~p~~T~~~~f~~~~~Wnewl~fpI~~~dLP~~a~L~~ti~~~~~~~~~~~iG~t~~~-LFd 129 (805)
..+|-||.+.+..+++ ...+|..+.-+.++.|||...|++...+|. +..|.|+|||...-.+...+|.+.++ +++
T Consensus 39 g~~dPyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~ 114 (296)
T 1dqv_A 39 GFSDPYVKIYLLPDRK---KKFQTKVHRKTLNPIFNETFQFSVPLAELA-QRKLHFSVYDFDRFSRHDLIGQVVLDNLLE 114 (296)
T ss_dssp SCCCEEEEEECTTSTT---SCEECCCCCSCSSCEEEEEEEEECCGGGGS-SCCCEEEEEECCSSSCCCEEEEEECCCTTG
T ss_pred CCCCEEEEEEEECCCC---EEEECCCCCCCCCCCEEEEEEEEECHHHHC-CCEEEEEEEECCCCCCCCEEEEEEECCCCC
T ss_conf 9808399999985897---147687247999973820799993689926-788999999758988774679999253102
No 8
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=1.00 E-value=1 Score=40.92 Aligned_cols=66 Identities=20% Similarity=0.297 Sum_probs=54.9
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCC----CCCEEEEEEEEEEECCCCC-CCCCCEEEEEECC
Q ss_conf 99962113178013435768347068999960699----8722476899973227762-1223336663048
Q 003651 80 GPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCG----KDERLVGGTTILLFNSKMQ-LKTGKQKLRLWPG 146 (805)
Q Consensus 80 ~~~~~Wnewl~fpI~~~dLP~~a~L~~ti~~~~~~----~~~~~iG~t~~~LFd~~~~-Lr~G~~~L~lwp~ 146 (805)
.+.+.|+|.|++.|...+. ..+-|.||++-++.. +.+.|+|-+-+||++.+|+ |+.|.+.|.++..
T Consensus 87 nk~P~w~EtIKi~LP~~~~-~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~dG~~L~DG~H~L~vyk~ 157 (220)
T 3l4c_A 87 VKQPRWFETVKVAIPIEDV-NRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRYDGTTLRDGEHDLIVYKA 157 (220)
T ss_dssp CSSCCCCEEEEEEECTTSS-TTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCTTSCBCCSEEEEEEEEEC
T ss_pred CCCCCCEEEEEEEECHHHC-CCEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCEECCCCEEEEEEEC
T ss_conf 7999850759995070126-7817999999730453455667802899997325788587549888889974
No 9
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=1.00 E-value=1 Score=40.64 Aligned_cols=76 Identities=18% Similarity=0.272 Sum_probs=57.4
Q ss_pred CCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEECC
Q ss_conf 79845899999768911236501042358999621131780134357683470689999606998722476899973227
Q 003651 51 RRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRDLTAHSQLALTVWDVSCGKDERLVGGTTILLFNS 130 (805)
Q Consensus 51 ~~~~l~V~~~l~~~~~~l~~p~~T~~~~f~~~~~Wnewl~fpI~~~dLP~~a~L~~ti~~~~~~~~~~~iG~t~~~LFd~ 130 (805)
..+|-||.+.+..+++ ...+|+.+.-+.++.|||...|++...+|. +..|.|+|||.....+...+|.+.++|-+-
T Consensus 61 g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~-~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l 136 (152)
T 1rsy_A 61 GTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELG-GKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 136 (152)
T ss_dssp SCCCEEEEEEEETTCC---SCEECCCCTTCSSCEEEEEEEECCCHHHHT-TCEEEEEEEECCSSSCCEEEEEEEEEGGGC
T ss_pred CCCCEEEEEEEECCCC---CEEECCCCCCCCCCCCCCCEEEEECHHHCC-CCEEEEEEEECCCCCCCCEEEEEEEECHHC
T ss_conf 9928399999985998---458336517999983865389750689948-888999999899998996889899971351
No 10
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=1.00 E-value=1 Score=40.20 Aligned_cols=92 Identities=15% Similarity=0.211 Sum_probs=0.0
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 59999832089999999998778788778766779845899999768911236501042358999621131780134357
Q 003651 18 VKFRVDRLEGTLPSIKSPNSVNDRSGISSTTEERRPELYVECALYIDGAPFGLPMRTRLESMGPMYCWNEPITLSTKYRD 97 (805)
Q Consensus 18 ~~ikI~~LeG~~~~~~~~~l~~~~~~~~~~~~~~~~~l~V~~~l~~~~~~l~~p~~T~~~~f~~~~~Wnewl~fpI~~~d 97 (805)
+.|+|..-.+- ........+|-||.+.+..+++.. ...+|..+.-+.++.|||...|++...+
T Consensus 32 L~v~v~~a~~L----------------~~~d~~g~~dpyv~v~~~~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~ 94 (153)
T 1w15_A 32 LTVVVLKARHL----------------PKSDVSGLSDPYVKVNLYHAKKRI-SKKKTHVKKCTPNAVFNELFVFDIPCES 94 (153)
T ss_dssp EEEEEEEEESC----------------C------CCCEEEEEEEEETTEEE-EEEECCCCCSCSSEEEEEEEEEECCSSS
T ss_pred EEEEEEEEECC----------------CCCCCCCCCCEEEEEEEEECCEEE-CEEECCCCCCCCCCEECCEEEEECCHHH
T ss_conf 99999985889----------------976789997869999998599072-5582671508999754644998789799
Q ss_pred CCCCCCEEEEEEEECCCCCCEEEEEEEEEE
Q ss_conf 683470689999606998722476899973
Q 003651 98 LTAHSQLALTVWDVSCGKDERLVGGTTILL 127 (805)
Q Consensus 98 LP~~a~L~~ti~~~~~~~~~~~iG~t~~~L 127 (805)
|. +..|.|+|||.....+...+|.+.++|
T Consensus 95 l~-~~~l~v~V~d~d~~~~~~~lG~~~i~l 123 (153)
T 1w15_A 95 LE-EISVEFLVLDSERGSRNEVIGRLVLGA 123 (153)
T ss_dssp ST-TEEEEEEEEECCTTSCCEEEEEEEEST
T ss_pred HC-CEEEEEEEEECCCCCCCCEEEEEEECC
T ss_conf 58-638999999689997886789899787
Done!