Query 003654
Match_columns 805
No_of_seqs 461 out of 2128
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 03:30:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003654.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003654hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1737 Oxysterol-binding prot 100.0 3E-126 7E-131 1101.4 40.7 672 106-795 76-799 (799)
2 KOG2209 Oxysterol-binding prot 100.0 1E-109 2E-114 859.0 13.8 374 415-795 25-445 (445)
3 PF01237 Oxysterol_BP: Oxyster 100.0 5.1E-96 1E-100 810.1 23.0 343 433-781 1-353 (354)
4 KOG2210 Oxysterol-binding prot 100.0 3.7E-61 7.9E-66 524.6 21.2 328 431-781 34-378 (392)
5 cd01247 PH_GPBP Goodpasture an 99.9 9.1E-23 2E-27 183.7 12.0 89 109-229 1-90 (91)
6 cd01265 PH_PARIS-1 PARIS-1 ple 99.8 1E-20 2.2E-25 171.7 10.8 89 109-231 1-94 (95)
7 PF15413 PH_11: Pleckstrin hom 99.8 7.2E-20 1.6E-24 171.1 9.1 110 109-230 1-112 (112)
8 cd01251 PH_centaurin_alpha Cen 99.8 9.9E-19 2.1E-23 161.1 11.8 90 109-232 1-101 (103)
9 cd01233 Unc104 Unc-104 pleckst 99.8 1.5E-18 3.2E-23 159.0 12.2 91 107-231 2-98 (100)
10 cd01264 PH_melted Melted pleck 99.7 7.7E-18 1.7E-22 154.0 11.1 89 109-230 2-100 (101)
11 PF15409 PH_8: Pleckstrin homo 99.7 8E-18 1.7E-22 149.9 9.9 86 111-231 1-89 (89)
12 cd01235 PH_SETbf Set binding f 99.7 1.7E-17 3.6E-22 151.2 11.6 88 110-231 2-101 (101)
13 cd01238 PH_Tec Tec pleckstrin 99.7 1.9E-17 4.1E-22 153.4 10.8 90 108-229 1-105 (106)
14 cd01246 PH_oxysterol_bp Oxyste 99.7 6.5E-17 1.4E-21 143.6 11.9 90 109-230 1-91 (91)
15 cd01260 PH_CNK Connector enhan 99.7 7.2E-17 1.6E-21 146.2 11.2 88 109-230 2-96 (96)
16 cd01252 PH_cytohesin Cytohesin 99.7 4.5E-16 9.7E-21 148.1 12.8 92 109-234 2-116 (125)
17 cd01236 PH_outspread Outspread 99.7 2.9E-16 6.3E-21 144.7 10.9 87 110-229 2-102 (104)
18 cd01257 PH_IRS Insulin recepto 99.7 8E-16 1.7E-20 141.2 12.1 90 107-229 2-100 (101)
19 cd01266 PH_Gab Gab (Grb2-assoc 99.6 7.5E-16 1.6E-20 143.0 10.8 87 109-229 1-106 (108)
20 cd01250 PH_centaurin Centaurin 99.6 2.2E-15 4.7E-20 134.6 10.6 90 109-230 1-94 (94)
21 cd01241 PH_Akt Akt pleckstrin 99.6 1E-14 2.2E-19 134.2 11.0 93 107-230 1-101 (102)
22 cd01245 PH_RasGAP_CG5898 RAS G 99.5 1.5E-14 3.2E-19 131.9 9.0 85 110-229 2-97 (98)
23 PF00169 PH: PH domain; Inter 99.5 9.8E-14 2.1E-18 123.9 13.6 94 107-231 1-103 (104)
24 cd01244 PH_RasGAP_CG9209 RAS_G 99.5 1.2E-13 2.5E-18 126.3 10.7 85 111-230 5-98 (98)
25 cd01219 PH_FGD FGD (faciogenit 99.5 5.6E-13 1.2E-17 122.5 12.4 96 108-232 3-100 (101)
26 cd01263 PH_anillin Anillin Ple 99.4 5E-13 1.1E-17 126.5 9.8 92 108-230 2-122 (122)
27 KOG0930 Guanine nucleotide exc 99.4 1.9E-12 4.2E-17 134.3 9.6 96 107-236 260-380 (395)
28 cd01237 Unc112 Unc-112 pleckst 99.3 3.6E-12 7.8E-17 116.9 9.4 81 119-231 16-103 (106)
29 cd01254 PH_PLD Phospholipase D 99.3 7.5E-12 1.6E-16 118.8 10.1 75 122-230 32-121 (121)
30 smart00233 PH Pleckstrin homol 99.3 3.8E-11 8.2E-16 105.3 12.7 93 108-231 2-101 (102)
31 KOG1739 Serine/threonine prote 99.2 2.4E-11 5.1E-16 134.0 10.3 94 107-232 24-117 (611)
32 cd01253 PH_beta_spectrin Beta- 99.2 1.3E-10 2.8E-15 106.8 10.2 92 109-230 1-104 (104)
33 cd01220 PH_CDEP Chondrocyte-de 99.1 5.1E-10 1.1E-14 102.6 12.1 93 108-232 3-98 (99)
34 cd00821 PH Pleckstrin homology 99.1 3E-10 6.6E-15 98.6 9.5 91 109-230 1-96 (96)
35 KOG1090 Predicted dual-specifi 99.1 2.4E-11 5.3E-16 141.7 3.1 97 101-231 1628-1731(1732)
36 cd00900 PH-like Pleckstrin hom 99.0 4.4E-09 9.6E-14 91.9 11.3 87 110-230 2-99 (99)
37 KOG0690 Serine/threonine prote 98.9 8.6E-10 1.9E-14 117.9 5.2 99 106-235 14-120 (516)
38 cd01230 PH_EFA6 EFA6 Pleckstri 98.9 2E-08 4.4E-13 94.8 11.4 89 120-235 23-115 (117)
39 PF14593 PH_3: PH domain; PDB: 98.7 7.2E-08 1.6E-12 89.1 9.6 90 106-234 12-102 (104)
40 cd01256 PH_dynamin Dynamin ple 98.7 1.1E-07 2.4E-12 85.5 10.0 90 107-230 1-104 (110)
41 cd01234 PH_CADPS CADPS (Ca2+-d 98.6 6.1E-08 1.3E-12 87.8 6.4 95 108-232 3-111 (117)
42 cd01218 PH_phafin2 Phafin2 Pl 98.6 4.4E-07 9.5E-12 84.0 12.0 94 108-234 5-101 (104)
43 PF15410 PH_9: Pleckstrin homo 98.4 1.5E-06 3.3E-11 82.3 10.5 103 109-231 2-118 (119)
44 cd01243 PH_MRCK MRCK (myotonic 98.3 6.5E-06 1.4E-10 77.2 12.0 99 106-232 1-120 (122)
45 KOG0705 GTPase-activating prot 98.2 4.3E-07 9.4E-12 102.8 2.8 113 31-143 216-341 (749)
46 cd01261 PH_SOS Son of Sevenles 98.2 1E-05 2.2E-10 75.9 11.3 104 107-233 4-111 (112)
47 cd01242 PH_ROK Rok (Rho- assoc 98.2 9.1E-06 2E-10 75.2 10.6 92 109-231 2-110 (112)
48 cd01249 PH_oligophrenin Oligop 98.2 5.2E-06 1.1E-10 76.4 8.8 90 109-228 1-102 (104)
49 KOG0248 Cytoplasmic protein Ma 98.2 4.5E-06 9.7E-11 96.2 8.5 97 106-234 248-344 (936)
50 KOG0521 Putative GTPase activa 98.0 2.4E-06 5.1E-11 103.6 2.3 95 107-235 274-372 (785)
51 cd01259 PH_Apbb1ip Apbb1ip (Am 97.9 2.8E-05 6E-10 72.2 7.1 93 109-232 2-109 (114)
52 cd01239 PH_PKD Protein kinase 97.9 9E-05 1.9E-09 69.1 9.6 88 109-230 2-117 (117)
53 KOG3640 Actin binding protein 97.8 2E-05 4.3E-10 93.8 6.0 98 105-233 988-1108(1116)
54 cd01262 PH_PDK1 3-Phosphoinosi 97.8 9.6E-05 2.1E-09 66.2 8.2 86 108-231 2-88 (89)
55 KOG2059 Ras GTPase-activating 97.7 5.9E-05 1.3E-09 87.9 6.6 97 103-234 560-667 (800)
56 KOG3723 PH domain protein Melt 97.6 2.8E-05 6.1E-10 88.2 2.2 97 107-236 735-841 (851)
57 PTZ00267 NIMA-related protein 97.5 0.00021 4.6E-09 82.8 8.6 97 106-231 376-476 (478)
58 PLN00188 enhanced disease resi 97.4 0.00064 1.4E-08 80.7 10.8 96 106-234 3-112 (719)
59 PF12814 Mcp5_PH: Meiotic cell 97.4 0.0013 2.7E-08 62.9 10.6 92 111-232 13-122 (123)
60 cd01222 PH_clg Clg (common-sit 97.3 0.003 6.5E-08 58.0 11.4 88 107-231 4-95 (97)
61 cd01224 PH_Collybistin Collybi 97.3 0.004 8.6E-08 58.2 12.0 90 108-231 3-107 (109)
62 PLN02866 phospholipase D 97.2 0.0022 4.7E-08 79.1 11.8 111 105-234 180-310 (1068)
63 cd01258 PH_syntrophin Syntroph 97.1 0.0016 3.4E-08 60.8 7.3 99 111-229 3-107 (108)
64 cd01221 PH_ephexin Ephexin Ple 97.0 0.0033 7.1E-08 60.2 8.8 79 123-228 27-119 (125)
65 KOG1117 Rho- and Arf-GTPase ac 96.8 0.00071 1.5E-08 80.3 2.7 99 101-234 81-180 (1186)
66 KOG3751 Growth factor receptor 96.7 0.0032 7E-08 71.7 7.2 100 105-233 315-426 (622)
67 PF15406 PH_6: Pleckstrin homo 96.7 0.0037 7.9E-08 57.9 6.1 49 180-229 63-111 (112)
68 cd01240 PH_beta-ARK Beta adren 96.4 0.0034 7.3E-08 58.1 3.9 96 107-235 3-102 (116)
69 KOG3531 Rho guanine nucleotide 96.2 0.0011 2.4E-08 78.6 -0.1 96 105-234 922-1022(1036)
70 KOG0248 Cytoplasmic protein Ma 96.1 0.0045 9.7E-08 72.3 3.6 88 107-230 259-347 (936)
71 KOG4424 Predicted Rho/Rac guan 95.8 0.011 2.3E-07 68.5 5.2 103 105-236 270-374 (623)
72 KOG1738 Membrane-associated gu 95.5 0.0056 1.2E-07 71.4 1.5 40 107-146 562-604 (638)
73 PF15404 PH_4: Pleckstrin homo 95.4 0.097 2.1E-06 53.5 9.7 32 109-140 1-32 (185)
74 KOG1451 Oligophrenin-1 and rel 95.2 0.042 9.2E-07 63.5 7.0 101 106-234 264-370 (812)
75 KOG0932 Guanine nucleotide exc 94.9 0.011 2.5E-07 67.7 1.7 106 105-236 504-622 (774)
76 KOG3543 Ca2+-dependent activat 94.8 0.0067 1.4E-07 70.0 -0.6 92 107-233 464-567 (1218)
77 cd01226 PH_exo84 Exocyst compl 94.7 0.39 8.5E-06 44.4 10.7 52 181-232 45-99 (100)
78 PTZ00283 serine/threonine prot 94.4 0.093 2E-06 61.5 7.5 35 198-232 455-490 (496)
79 cd01228 PH_BCR-related BCR (br 94.3 0.28 6.2E-06 44.7 8.6 90 108-231 4-94 (96)
80 cd01232 PH_TRIO Trio pleckstri 94.1 0.88 1.9E-05 43.1 11.9 99 108-232 6-113 (114)
81 cd01248 PH_PLC Phospholipase C 94.0 0.22 4.7E-06 46.8 7.9 34 196-229 77-114 (115)
82 cd01225 PH_Cool_Pix Cool (clon 91.8 1 2.2E-05 42.3 8.7 80 120-230 25-108 (111)
83 cd01227 PH_Dbs Dbs (DBL's big 90.2 4.2 9E-05 39.7 11.5 53 181-233 62-117 (133)
84 KOG1117 Rho- and Arf-GTPase ac 90.1 0.31 6.6E-06 59.0 4.4 91 105-233 190-281 (1186)
85 KOG4807 F-actin binding protei 89.8 0.0054 1.2E-07 67.4 -9.4 78 122-230 34-113 (593)
86 cd01223 PH_Vav Vav pleckstrin 89.3 3.7 8E-05 39.1 10.1 97 110-234 7-114 (116)
87 KOG3727 Mitogen inducible gene 80.7 0.31 6.8E-06 56.5 -1.6 52 180-231 400-458 (664)
88 PF15408 PH_7: Pleckstrin homo 80.5 0.81 1.8E-05 40.9 1.2 86 110-232 1-98 (104)
89 KOG0592 3-phosphoinositide-dep 79.5 5.5 0.00012 46.9 7.7 90 107-235 451-541 (604)
90 KOG4424 Predicted Rho/Rac guan 78.0 2.4 5.2E-05 49.8 4.2 94 106-233 496-597 (623)
91 KOG1170 Diacylglycerol kinase 74.4 0.16 3.4E-06 60.9 -6.5 90 109-233 4-96 (1099)
92 KOG3520 Predicted guanine nucl 66.2 6.5 0.00014 50.0 4.5 58 180-237 666-727 (1167)
93 KOG3523 Putative guanine nucle 63.9 9.3 0.0002 45.3 4.9 94 108-228 470-591 (695)
94 PF15405 PH_5: Pleckstrin homo 58.6 36 0.00077 33.2 7.2 34 108-141 2-35 (135)
95 cd01231 PH_Lnk LNK-family Plec 58.1 51 0.0011 30.8 7.6 36 195-230 71-107 (107)
96 KOG3551 Syntrophins (type beta 54.8 7.6 0.00017 43.7 2.1 98 107-229 292-399 (506)
97 KOG4236 Serine/threonine prote 49.8 19 0.00041 42.6 4.2 90 107-231 413-523 (888)
98 KOG3551 Syntrophins (type beta 49.3 24 0.00051 40.0 4.7 53 181-233 215-273 (506)
99 KOG1924 RhoA GTPase effector D 47.6 54 0.0012 40.4 7.6 18 5-22 515-534 (1102)
100 PLN02372 violaxanthin de-epoxi 45.7 4.9E+02 0.011 30.2 14.2 16 221-236 329-344 (455)
101 KOG3003 Molecular chaperone of 45.6 40 0.00087 35.8 5.5 40 508-559 181-221 (236)
102 KOG3531 Rho guanine nucleotide 44.5 14 0.00031 45.3 2.4 98 107-237 750-850 (1036)
103 KOG2070 Guanine nucleotide exc 41.1 37 0.00081 39.6 4.8 76 123-229 325-404 (661)
104 PF08458 PH_2: Plant pleckstri 40.7 42 0.0009 31.8 4.3 34 199-232 71-104 (110)
105 KOG1737 Oxysterol-binding prot 39.1 12 0.00026 46.2 0.7 57 179-237 117-174 (799)
106 cd05394 RasGAP_RASA2 RASA2 (or 32.4 14 0.0003 41.0 -0.2 29 104-132 280-313 (313)
107 PF10504 DUF2452: Protein of u 32.3 77 0.0017 31.9 4.9 25 510-534 85-109 (159)
108 PF10146 zf-C4H2: Zinc finger- 32.3 1.6E+02 0.0035 31.4 7.7 28 285-312 51-78 (230)
109 cd05134 RasGAP_RASA3 RASA3 (or 30.7 19 0.00042 40.0 0.5 27 106-132 279-310 (310)
110 KOG4047 Docking protein 1 (p62 26.2 34 0.00073 39.6 1.4 30 106-135 7-38 (429)
111 cd05135 RasGAP_RASAL Ras GTPas 26.2 20 0.00042 40.3 -0.4 26 106-131 302-333 (333)
112 cd05128 RasGAP_GAP1_like The G 25.7 23 0.00049 39.5 -0.1 27 105-131 284-315 (315)
113 cd01255 PH_TIAM TIAM Pleckstri 24.9 4.2E+02 0.0091 26.4 8.3 28 206-233 129-156 (160)
114 PF14254 DUF4348: Domain of un 23.9 92 0.002 33.9 4.0 40 592-631 225-266 (273)
115 PF05278 PEARLI-4: Arabidopsis 22.7 5E+02 0.011 28.5 9.3 107 212-318 116-252 (269)
116 KOG4797 Transcriptional regula 21.1 2.6E+02 0.0055 26.5 5.8 44 286-332 66-109 (123)
No 1
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=100.00 E-value=3.2e-126 Score=1101.39 Aligned_cols=672 Identities=40% Similarity=0.663 Sum_probs=538.5
Q ss_pred CceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhh-hhcccCCCCC---------C
Q 003654 106 QHGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSM-RRMSRNGNSQ---------S 175 (805)
Q Consensus 106 ~~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~-~~~~~~~~~~---------~ 175 (805)
+..++|||+||++++++|++|||+|.+|+|+||++++..+........+....|+.... ..+.-..... .
T Consensus 76 ~~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~q~~~~~~~~~~ 155 (799)
T KOG1737|consen 76 GASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTAWIQNGERMDICSVDGSCQIYLVELSKKL 155 (799)
T ss_pred cccccceeeccccccCCcccceEEecCcceeeeccCCccccCCCCcccccccccccCCCcccchhhcccchhhhhhhHHH
Confidence 45678999999999999999999999999999999998777766555565666664432 2222222111 1
Q ss_pred CCCccceEEEcc-ceEEEecCCCCccEEEEeCCeEEEEEcCC---H-HHHHHHHHHHHHHHHHcccccCCC---CCCCCC
Q 003654 176 RQRIPVGEIHLK-VASIRESKSDDKKFSIYTGTKRVHLRAET---R-EDRVKWMEALQAVKEMFPRISNSD---YFVPMD 247 (805)
Q Consensus 176 ~~~~p~G~I~L~-~~si~~~~~d~~~F~I~t~~kt~~L~A~s---~-~dr~~Wi~AL~~a~~~~~~~~~~~---~~~~~~ 247 (805)
..++..+.++|. ...++.. ++...+.+.+.+++.+++... . ..+..|+.+++.+....++..... +....+
T Consensus 156 ~~~~~~~~~~l~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~~~ 234 (799)
T KOG1737|consen 156 QRQGWLHALELAPLIAVEQT-SEYENENKSVMTKRIPLSIAVISVAQETREINVDVLRLLSSLPNLTGQLLLRELNALLE 234 (799)
T ss_pred hhcchhhhhhhccchhhhcc-ccccccccccccccccchhhhhcccccchhhhhhhhhhccccccchhhhhhhhhccccc
Confidence 334456777777 5566666 777888888888888888774 2 778999999999999887643221 111111
Q ss_pred C---------CccccHHHHHHHHHhHhHhHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccchh
Q 003654 248 N---------GVAVSTEKLRQRLLDEGVTEDAIQESEDIMRDEFSALHKHLVVLKQRQLLLIDTLRQLETEKVDLEDTVV 318 (805)
Q Consensus 248 ~---------~~~~s~~~L~~rl~e~~~~~~lik~~e~~~~~e~s~l~~~l~~~~~~~~~l~~~l~~le~~~~~le~~~~ 318 (805)
. .+...++++..++...+.....+++||+++++++...+.++.+..+....|.+++.|||.|+.+|+..+.
T Consensus 235 ~~~~~s~s~~k~~~~~e~~~~k~~~s~~s~~a~~~~e~~~~s~~~~~s~~s~~~~~q~~~l~~~l~~le~q~~~le~a~~ 314 (799)
T KOG1737|consen 235 DKKEQSSSKSKLQERTERIALKVLTSLASVFAECDDEAELLSQSRIESDASHSESEQRIRLQEALSALENQNTDLEVALR 314 (799)
T ss_pred cccccccchhhhHHHHHHHHHHHhhhhHHHHhHHHHHHHHHHHhHhhhhhhcchhhhhhhhhhHHHHHHhhhhhHHHHHh
Confidence 1 1234477888888888888888999999999999999999999999999999999999999999988875
Q ss_pred chhhhhhhhcCCCcccccccCCCCCCCCCCCccccccc-CCcccccccccccccccC--ccccC------CCCCCCCCCC
Q 003654 319 NESQRQWKEQGASPRLRQDKCSEGSASNSDEHDRYDAA-ETDEDDNAFFDTRDFLSS--SSFRS------NGSDHHQSPL 389 (805)
Q Consensus 319 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~~~e~~f~Da~~~~~~--~~~~~------~~~~~~~~~~ 389 (805)
....++.+..... .+.. +.. ..++. ...+++++||||.+.++. ....+ .+.....+..
T Consensus 315 ~~~~~~~~~~~~~----------~~~~-~~~--~~~~~~~~~~e~~e~~da~s~~s~~~~~~~s~~~~e~~~s~~~~s~~ 381 (799)
T KOG1737|consen 315 RAHAAQAALDLSK----------VTRL-SLL--HEEESFSESDELTEQFDAESSLSDAQESLDSNSESENEGSEDEESYT 381 (799)
T ss_pred HhhhhhhccCccc----------cccc-ccc--ccccccccccccccccccccccchhhhccCCcccccccccccccccc
Confidence 3222221111100 0010 000 01112 445667899999886531 11101 0011000000
Q ss_pred C---CCCccccccCCCcccc----cccCC-CCccccccccCCCcccccccchhHHHhhhhcCCCCCcccccccccccCCh
Q 003654 390 D---SDDEESVDSEDIDPLI----RHVGS-NHPYVRRRKKLPDPVEKEKGISLWSMIKDNIGKDLTKVCLPVYFNEPISS 461 (805)
Q Consensus 390 ~---~~~~~~~~~~~~~~~~----~~~~~-~~~~~~rR~~lP~~~~~~~~~~lwsilK~~iGkDLskIslPv~~~EP~S~ 461 (805)
. ..........+...+. .+.+. ..+.++||++||++..++.+++||+|||+|||||||+|+|||+||||+|+
T Consensus 382 s~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~rr~~lp~~~~~~~~islw~~~k~~iGkDlskv~~PV~~nEP~S~ 461 (799)
T KOG1737|consen 382 SDISDNGSSDALSADGDKSSQALNEKVPSGSGAEVARRTNLPAPSKPSSSISLWSILRNNIGKDLSKVSMPVEFNEPLSL 461 (799)
T ss_pred cccccCCCccccccccccccccccccccccccccccccccCCCCcCcCCCccHHHHHhhcccccccccccceecCCcchH
Confidence 0 0000000000000000 00000 13447899999998888999999999999999999999999999999999
Q ss_pred hhhhhhcccchHHHHHHHhccCCCChHHHHHHHHHHHhhhccccCCCCCCCCCCCCCCeEEEEecCCCEEEEEEeccCCC
Q 003654 462 LQKCFEELEYSYLLDRAYEWGKQGNSLMRILNIAAFAVSGYASTDGRHCKPFNPLLGETYEADYPDKGLRFFSEKVSHHP 541 (805)
Q Consensus 462 LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~aF~vS~y~~~~~r~~KPfNPiLGETfe~~~~d~g~r~iaEQVSHHP 541 (805)
|||++|+|||++|||+|+++ +|+++||+||+||+||+|+++..|++|||||||||||||+++|+|+|||+|||||||
T Consensus 462 LQr~~EdlEYs~LLd~A~~~---~d~~~R~~~vaafavS~Ya~t~~r~~KPFNPlLgETyE~~r~dkg~rf~sEqVSHhP 538 (799)
T KOG1737|consen 462 LQRVAEDLEYSELLDKAANY---EDPLERMVYVAAFAVSSYSSTSRRTAKPFNPLLGETYEMDRPDKGLRFFSEQVSHHP 538 (799)
T ss_pred HHHhhhhccchhhhHHHHhc---CCcHHHHHHHHHHHhhhcchhcccccCCCCcccccceEeeccCCceeeeeeeeccCC
Confidence 99999999999999999997 789999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEecCcEEEEEEeeeeeEEEEeEEEEEeceEEEEEecC-CcEEEecccceeeeeeecceeeEeecceEEEEcCC-
Q 003654 542 MVVACHCEGRGWKFWADSNLKSKFWGRSIQLDPVGALTLEFDD-GEIFQWSKVTTSIYNLILGKLYCDHYGTMRIDGNR- 619 (805)
Q Consensus 542 PisA~~~e~~g~~~~g~~~~kskF~G~si~v~~~G~~~l~f~~-ge~Y~~~~pt~~i~nii~G~~~~e~~G~~~I~~~~- 619 (805)
||+|||||+++|.|||++.+++||||+||+|.|.|.++|+|++ |++|+|.+|+++|||||+|++|||++|+|.|+|++
T Consensus 539 Pi~A~h~es~~w~~~~ds~~~sKF~Gksi~v~P~G~l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~D~~ge~~i~n~~~ 618 (799)
T KOG1737|consen 539 PISACHAESNNWTFWGDSKVKSKFWGKSIEVPPLGILHVTLKNIGEHYSWAKVTTTVHNIILGKLWVDHYGEMEITNHTT 618 (799)
T ss_pred CcccccccCCCceeeccccccccccccceeecCCceEEEEEcCCCccccccCccceecceeeccccccccccEEEecCCC
Confidence 9999999999999999999999999999999999999999996 99999999999999999999999999999999974
Q ss_pred c-ceEEEEEeecCCCCCCCceEEEEEEecCCcEEEEEeeeecceeEEEeCCCCCCCC-CCcceEEEecCCCCcccccccc
Q 003654 620 E-YSCKLKFKEQSIIDRNPHQVQGVVQDKNGKTVATLFGKWDESMHFMNGDGSGKGK-GSELQLLWKRSKPPKYQTRYNF 697 (805)
Q Consensus 620 g-~~~~i~F~~~~~f~~~~~~V~G~V~d~~g~~~~~i~G~Wd~~l~~~~~~~~~~~k-~~~~~~lW~~~~~~~~~~~y~f 697 (805)
+ .+|+|+|++.|||+++.|+|+|.|+|.+|++++++.|+||+.|++..++..+-.. .....++|++++.|+| .+|+|
T Consensus 619 ~~~~c~L~F~~~~~~~~~~~ev~g~V~~~s~~~~~~l~GkW~e~~~~~~~~~~~~~~~~~~~~~iWk~~~~Pkn-~~y~f 697 (799)
T KOG1737|consen 619 GSDKCKLKFVKAGYFSRNAREVEGSVRNKSGKKVEVLTGKWDESLYYFKVDKVGLPEPETSEKLIWKANDLPKN-NKYNF 697 (799)
T ss_pred CcceeEEEEeeecccCCCcceeEEEEeCCCCceeEEEeeeehhhhhhccccccccccCCccceeeeecCCCCCC-ccccc
Confidence 5 5699999999999999999999999999999999999999999987655432111 1257899999999998 89999
Q ss_pred ccceeeccCCChhhhcCCCCCCCCChHhHHHHHcCChHHHHHHHHHHHHHHHHHHHhcc---CCCccceeEecCCCC-cE
Q 003654 698 SRFAITLNELSPELKEKLPPTDSRLRPDQRCLENGEYDMANAEKLRLEQRQRQARTMQE---RGWKPRWFTKDKGSG-TY 773 (805)
Q Consensus 698 t~fa~~LNe~~~~~~~~l~pTDSR~RpD~raLe~Gd~d~A~~eK~rLEe~QR~~Rk~re---~~w~P~~F~~~~~~~-~~ 773 (805)
|.||++||+++|.+++.|||||||||||||+||+|+||+|+.||.||||+||++|+.|+ ..|+|+||.++.+.. .|
T Consensus 698 t~fai~LNel~p~l~~~lpPTDSRlRPDqr~lE~G~~~~a~~EK~rlEe~QR~~r~~re~~~~~~~prwF~~~~~~~~~~ 777 (799)
T KOG1737|consen 698 TGFAIELNELTPHLKKLLPPTDSRLRPDQRALENGEYDEANAEKLRLEEKQRARRRKREENGEEYEPRWFEKVKDPSTYW 777 (799)
T ss_pred chhheecccCCchhhccCCCCCcccCcchhhhhccChhhhhhhhHhHHHHHHHHHHHHHhhccccccccccccCCCcceE
Confidence 99999999999999999999999999999999999999999999999999999988764 359999999998765 79
Q ss_pred EEcCChhhhhccCCCCCCCCCC
Q 003654 774 RYIGGYWEAREKGSWESCPDIF 795 (805)
Q Consensus 774 ~y~g~YWe~r~~~~w~~~~dif 795 (805)
+|+|+||++|++.+|..|+|||
T Consensus 778 ~~ng~Ywe~r~~~d~~~~~~if 799 (799)
T KOG1737|consen 778 VYNGGYWEAREKQDWKDCPDIF 799 (799)
T ss_pred EecCchheeecccCccccccCC
Confidence 9999999999999999999998
No 2
>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-109 Score=858.99 Aligned_cols=374 Identities=41% Similarity=0.775 Sum_probs=349.2
Q ss_pred cccccccCCCcccccccchhHHHhhhhcCCCCCcccccccccccCChhhhhhhcccchHHHHHHHhccCCCChHHHHHHH
Q 003654 415 YVRRRKKLPDPVEKEKGISLWSMIKDNIGKDLTKVCLPVYFNEPISSLQKCFEELEYSYLLDRAYEWGKQGNSLMRILNI 494 (805)
Q Consensus 415 ~~~rR~~lP~~~~~~~~~~lwsilK~~iGkDLskIslPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V 494 (805)
..+.||+||+++-....+|||+|||+|||||||||+|||.||||+||||||+|.|+|.+||.+|+.+ .||+|||.||
T Consensus 25 ~hk~RT~LPa~m~sr~d~SIW~Ilr~ciGkelSkiTmPV~~NEPLSFLQRltEyme~~yLi~kAs~~---~~p~eRmqyV 101 (445)
T KOG2209|consen 25 IHKHRTSLPAPMFSRNDFSIWSILRKCIGKELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSQ---SDPVERMQYV 101 (445)
T ss_pred hhhhcccCCccccccccccHHHHHHhhhchhhhheeeeeeeCCcHHHHHHHHHHHHHHHHHHHHhhC---CChHHHHHHH
Confidence 3468999999999999999999999999999999999999999999999999999999999999986 8999999999
Q ss_pred HHHHhhhccccCCCCCCCCCCCCCCeEEEEecCCCEEEEEEeccCCCccceeEEe--cCcEEEEEEeeeeeEEEEeEEEE
Q 003654 495 AAFAVSGYASTDGRHCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCE--GRGWKFWADSNLKSKFWGRSIQL 572 (805)
Q Consensus 495 ~aF~vS~y~~~~~r~~KPfNPiLGETfe~~~~d~g~r~iaEQVSHHPPisA~~~e--~~g~~~~g~~~~kskF~G~si~v 572 (805)
+|||||+.++...|+.||||||||||||+.+.|.|+|||||||||||||||||+| ++.|.|+|.+.++.||||+||++
T Consensus 102 AAFAvsavas~weR~gKPFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl~~dF~fhGsi~PklkFWgksvea 181 (445)
T KOG2209|consen 102 AAFAVSAVASQWERTGKPFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEA 181 (445)
T ss_pred HHHHHHHHHHhHHHhcCCCcchhhhhhhheecccceEEeehhhccCCChhHhhhcccCcceEEeeeecccceeccceeec
Confidence 9999999999999999999999999999999999999999999999999999999 57999999999999999999999
Q ss_pred EeceEEEEEec-CCcEEEecccceeeeeeecceeeEeecceEEEEcC-CcceEEEEEeecCCCCCCCceEEEEEEecCCc
Q 003654 573 DPVGALTLEFD-DGEIFQWSKVTTSIYNLILGKLYCDHYGTMRIDGN-REYSCKLKFKEQSIIDRNPHQVQGVVQDKNGK 650 (805)
Q Consensus 573 ~~~G~~~l~f~-~ge~Y~~~~pt~~i~nii~G~~~~e~~G~~~I~~~-~g~~~~i~F~~~~~f~~~~~~V~G~V~d~~g~ 650 (805)
.|.|.++|+|. +||.|+|+.|+++|||||+|++||+++|+|.|.|+ ||+.|++.|++.|+||++.|+|+|.|+|++.+
T Consensus 182 ~Pkgtitle~~k~nEaYtWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~~~vl~Fk~~G~~gk~lHkVEG~i~d~~k~ 261 (445)
T KOG2209|consen 182 EPKGTITLELLKHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGHKCVLNFKPCGLFGKELHKVEGHIQDKSKK 261 (445)
T ss_pred CCCceEEEEecccCcceeccCCcceeeeehhhhhhHhhcCcEEEEecCccceeEEecccccccccchhheeehhhccccc
Confidence 99999999997 59999999999999999999999999999999997 89999999999999999999999999999999
Q ss_pred EEEEEeeeecceeEEEeCCCC----------------CCC------C-------------CCcceEEEecCCCCccc-cc
Q 003654 651 TVATLFGKWDESMHFMNGDGS----------------GKG------K-------------GSELQLLWKRSKPPKYQ-TR 694 (805)
Q Consensus 651 ~~~~i~G~Wd~~l~~~~~~~~----------------~~~------k-------------~~~~~~lW~~~~~~~~~-~~ 694 (805)
++|.|.|+|++.|+.++.... ++. + -++.++||..++.|++. .+
T Consensus 262 kl~~lYGkWTe~l~~cd~esf~~~~Kq~~r~~~~r~~s~~~~~see~dd~P~~ds~~v~~iPgSk~LW~~n~rP~n~~~~ 341 (445)
T KOG2209|consen 262 KLCALYGKWTECLYSCDPESFDAFKKQDKRNTEERKNSKQMSTSEELDDMPVPDSESVFIIPGSKLLWRINPRPPNSAQM 341 (445)
T ss_pred cchhhhccHHHHHhcCCHHHHHHHHHhhhhcchhhhhhccCCchhhccCCCCCCcceeEecCCCeEEEEecCCCCCHHHh
Confidence 999999999999987532110 000 0 01578999999988876 69
Q ss_pred cccccceeeccCCChhhhcCCCCCCCCChHhHHHHHcCChHHHHHHHHHHHHHHHHHHHhc---cCCCccceeEecCCC-
Q 003654 695 YNFSRFAITLNELSPELKEKLPPTDSRLRPDQRCLENGEYDMANAEKLRLEQRQRQARTMQ---ERGWKPRWFTKDKGS- 770 (805)
Q Consensus 695 y~ft~fa~~LNe~~~~~~~~l~pTDSR~RpD~raLe~Gd~d~A~~eK~rLEe~QR~~Rk~r---e~~w~P~~F~~~~~~- 770 (805)
|+||.||+.|||+.+++...+||||||+|||+|+||+|++|+|.+||.||||+||++||.| +..|+|+||++.+..
T Consensus 342 y~FT~FalsLNem~~~M~~tl~pTD~RlRpDi~~mE~G~~D~AseeK~rlEEkQRe~Rk~rs~~~~dw~~rWF~~~~np~ 421 (445)
T KOG2209|consen 342 YNFTSFALSLNEMDKGMESTLPPTDCRLRPDIRAMENGNIDQASEEKKRLEEKQREARKNRSKSEEDWKTRWFHQGPNPY 421 (445)
T ss_pred hchhhheeehhhhccCcccccCCcccccCchhhhhhcCCcchhHHHHHHHHHHHHHHHhhcccccccCcchhcccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999988 567999999998643
Q ss_pred ---CcEEEcCChhhhhccCCCCCCCCCC
Q 003654 771 ---GTYRYIGGYWEAREKGSWESCPDIF 795 (805)
Q Consensus 771 ---~~~~y~g~YWe~r~~~~w~~~~dif 795 (805)
..|.|.||||+ +++++|||||
T Consensus 422 t~~~dWlYsGgYwd----R~ysn~~~i~ 445 (445)
T KOG2209|consen 422 TGAQDWLYSGGYWD----RNYSNCPDIY 445 (445)
T ss_pred CCcccceeecCccc----cccccCcccC
Confidence 46999999998 7899999998
No 3
>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related. These include mammalian oxysterol-binding protein (OSBP), a protein of about 800 amino-acid residues that binds a variety of oxysterols (oxygenated derivatives of cholesterol); yeast OSH1, a protein of 859 residues that also plays a role in ergosterol synthesis; yeast proteins HES1 and KES1, highly related proteins of 434 residues that seem to play a role in ergosterol synthesis; and yeast hypothetical proteins YHR001w, YHR073w and YKR003w.; PDB: 3SPW_A 1ZI7_C 1ZHW_A 1ZHX_A 1ZHY_A 1ZHZ_A 1ZHT_A.
Probab=100.00 E-value=5.1e-96 Score=810.10 Aligned_cols=343 Identities=48% Similarity=0.890 Sum_probs=266.3
Q ss_pred hhHHHhhhhcCCCCCcccccccccccCChhhhhhhcccchHHHHHHHhccCCCChHHHHHHHHHHHhhhccccCCCCCCC
Q 003654 433 SLWSMIKDNIGKDLTKVCLPVYFNEPISSLQKCFEELEYSYLLDRAYEWGKQGNSLMRILNIAAFAVSGYASTDGRHCKP 512 (805)
Q Consensus 433 ~lwsilK~~iGkDLskIslPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~aF~vS~y~~~~~r~~KP 512 (805)
|||++||++|||||++|+|||+||||+|+|||++++|+|++||++|+.+ .||++||++|++|+||+|+.+..|++||
T Consensus 1 s~w~~lK~~~G~dLs~islPv~~~eP~S~Lqr~~~~~~y~~lL~~Aa~~---~d~~eR~~~V~~f~~S~~~~~~~~~~KP 77 (354)
T PF01237_consen 1 SIWSFLKQKIGKDLSRISLPVFFNEPRSFLQRLAEDFEYPDLLDKAAEE---DDPLERMLYVAAFALSSYSSTPGRTKKP 77 (354)
T ss_dssp HHHHHHHHT--S-GGGS---GGGEEEEEGGGGGGGGSSSHHHHHGGGGS----HHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHhhhcCCCChhcCccCceecCCCcHHHhhhhhhhChHHHhccCCC---CCHHHHHHHHHHHHHhhhhhhcCCCCcC
Confidence 6999999999999999999999999999999999999999999999874 8999999999999999999887788999
Q ss_pred CCCCCCCeEEEEecCCCEEEEEEeccCCCccceeEEecCcEEEEEEeeeeeEEEEeEEEEEeceEEEEEecC-CcEEEec
Q 003654 513 FNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADSNLKSKFWGRSIQLDPVGALTLEFDD-GEIFQWS 591 (805)
Q Consensus 513 fNPiLGETfe~~~~d~g~r~iaEQVSHHPPisA~~~e~~g~~~~g~~~~kskF~G~si~v~~~G~~~l~f~~-ge~Y~~~ 591 (805)
||||||||||+.++ +|++||||||||||||+|||++++||+++|++.+++||+|+||++.+.|.++|+|++ ||+|+|+
T Consensus 78 fNPiLGETfe~~~~-~~~~~~aEQVSHHPPisa~~~~~~~~~~~g~~~~~~kf~g~sv~~~~~G~~~i~f~~~~e~Y~~~ 156 (354)
T PF01237_consen 78 FNPILGETFELVRP-DGTRFIAEQVSHHPPISAFHAEGRGWKFYGHIEPKSKFWGNSVEVNPIGKVTITFPDGGETYTWT 156 (354)
T ss_dssp E---TT-EE--TT--T-EEEEEEEEETTTTEEEEEEEETTEEEEEEEEEEEEE-TT-EEEEEEEEEEEEET--TEEEEEE
T ss_pred cCCCCcceeeeccC-ceEEEEEecccCCCCceEEEEEcCCEEEEEEEeeeEEEeceEEEEEECCcEEEEEcCCceEEEEe
Confidence 99999999999988 799999999999999999999999999999999999999999999999999999987 6999999
Q ss_pred ccceeeeeeecceeeEeecceEEEEcC-CcceEEEEEeecCCCCCCCceEEEEEEecCCcEEEEEeeeecceeEEEeCCC
Q 003654 592 KVTTSIYNLILGKLYCDHYGTMRIDGN-REYSCKLKFKEQSIIDRNPHQVQGVVQDKNGKTVATLFGKWDESMHFMNGDG 670 (805)
Q Consensus 592 ~pt~~i~nii~G~~~~e~~G~~~I~~~-~g~~~~i~F~~~~~f~~~~~~V~G~V~d~~g~~~~~i~G~Wd~~l~~~~~~~ 670 (805)
+|++.|+||++|++|+|++|+|+|+|. +|++|+|+|+++|||+++.+.|+|.|++.+|++++.|.|+||+.|++...+.
T Consensus 157 ~p~~~i~gi~~G~~~~e~~G~~~i~~~~tg~~~~i~f~~~~~f~~~~~~v~G~I~~~~~~~~~~i~G~W~~~i~~~~~~~ 236 (354)
T PF01237_consen 157 KPTTYIRGIIFGKRYIEHVGKMVITCHKTGLKAEIEFKPKGWFSGKSNEVEGKIYDSKGKPIYKISGKWDEEIYIKDVKN 236 (354)
T ss_dssp --SEEEESTTTTS-EEEEESEEEEEET-TS-EEEEEEETSSSTSSSTTEEEEEEESSGGG-SEEEEEETTSEEEEEETT-
T ss_pred cCcEEEeeeecccEEEEecCCEEEEcCCcceEEEEEEecCCcccccceeeEEEEEEccCceeEEeeeeeCCeEEEEeccc
Confidence 999999999999999999999999996 8999999999999999999999999999889999999999999999977652
Q ss_pred CCCCCCCcceEEEecCCCCccc-cccccccceeeccCCChhhhcCCCCCCCCChHhHHHHHcCChHHHHHHHHHHHHHHH
Q 003654 671 SGKGKGSELQLLWKRSKPPKYQ-TRYNFSRFAITLNELSPELKEKLPPTDSRLRPDQRCLENGEYDMANAEKLRLEQRQR 749 (805)
Q Consensus 671 ~~~~k~~~~~~lW~~~~~~~~~-~~y~ft~fa~~LNe~~~~~~~~l~pTDSR~RpD~raLe~Gd~d~A~~eK~rLEe~QR 749 (805)
.. ......++|++++.+.+. .+|+||.||++|||+++++.+.++|||||+|||+|||++||+|+|++||.+|||+||
T Consensus 237 ~~--~~~~~~~lw~~~~~~~~~~~~~~ft~fa~~LNe~~~~~~~~~~ptDSr~R~d~~al~~gd~~~A~~eK~~lEe~QR 314 (354)
T PF01237_consen 237 DS--DTGESKLLWDANPLPPNPKKYYGFTQFAIPLNELTPELEEKLPPTDSRWRPDQRALENGDIDKAQEEKKRLEEKQR 314 (354)
T ss_dssp -----GGGEEEEEETTTS-SS--B----------G-------G-GS-TTBHHHHHHHHHHHHT-HHHHHHHHHHHHHHHH
T ss_pred cc--cCCCceEEEECCCCcccccceecccccccccccccccccccCCchhccchHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 11 012578999999877755 579999999999999998878999999999999999999999999999999999999
Q ss_pred HHHHhcc---CCCccceeEecCC----CCcEEEcCChhh
Q 003654 750 QARTMQE---RGWKPRWFTKDKG----SGTYRYIGGYWE 781 (805)
Q Consensus 750 ~~Rk~re---~~w~P~~F~~~~~----~~~~~y~g~YWe 781 (805)
++||+|+ ..|+|+||+++.+ ...|+|+||||+
T Consensus 315 ~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~w~~~g~YW~ 353 (354)
T PF01237_consen 315 ADRKERKEKGEEWKPRWFEKVEDPSTEEEEWVYKGGYWE 353 (354)
T ss_dssp HHHHHHHHCT--GGGSSEEEEE-SSS--T----------
T ss_pred HHHHHHHHcCCCccCCeEEECCCCCCccccccccccccC
Confidence 9998774 5799999998854 356999999998
No 4
>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-61 Score=524.58 Aligned_cols=328 Identities=24% Similarity=0.358 Sum_probs=279.8
Q ss_pred cchhHHHhhh-hcCCCCCcccccccccccCChhhhhhhcccchHHHHHHHhccCCCChHHHHHHHHHHHhhhccccCCCC
Q 003654 431 GISLWSMIKD-NIGKDLTKVCLPVYFNEPISSLQKCFEELEYSYLLDRAYEWGKQGNSLMRILNIAAFAVSGYASTDGRH 509 (805)
Q Consensus 431 ~~~lwsilK~-~iGkDLskIslPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~aF~vS~y~~~~~r~ 509 (805)
...||.++++ .+|+|||+|+||.|++||+|+||++++.+.+.+||-.+.. ..||++||+.|++|++|+|+......
T Consensus 34 ~s~i~~L~sq~rpg~DLs~v~LPtfile~rs~Le~~~~~~~~~dll~~~~~---~~~p~~R~~~VvkwylS~~~~~~~~~ 110 (392)
T KOG2210|consen 34 KSIILDLLSQLRPGMDLSRVVLPTFILEPRSLLEKYTDFSYHPDLLLEASS---EADPLERMLAVVKWYLSGFHAGPKGR 110 (392)
T ss_pred cceeecHhhhccCCCCcccccchhhhhhhHHHHHHhhhhhhccchhccccc---CCCHHHHhhhheeeeehhcccccccc
Confidence 3457999987 8999999999999999999999999998888888877765 58999999999999999999887777
Q ss_pred CCCCCCCCCCeEEEEec-----C-CCEEEEEEeccCCCccceeEEec--CcEEEEEEeeeeeEEEEeEEEEEeceEEEEE
Q 003654 510 CKPFNPLLGETYEADYP-----D-KGLRFFSEKVSHHPMVVACHCEG--RGWKFWADSNLKSKFWGRSIQLDPVGALTLE 581 (805)
Q Consensus 510 ~KPfNPiLGETfe~~~~-----d-~g~r~iaEQVSHHPPisA~~~e~--~g~~~~g~~~~kskF~G~si~v~~~G~~~l~ 581 (805)
+|||||||||||.|.|. + ..+.|+||||||||||||||++. +|+++.|++.++++|.|+||.|.+.|...|+
T Consensus 111 ~~PyNPILGEtF~~~w~~~~~p~~~~~~~iAEQVSHHPPvSAf~~~~~~~~i~v~g~v~~kSkF~G~s~~V~~~G~~~l~ 190 (392)
T KOG2210|consen 111 KKPYNPILGETFTCHWKYPPHPSKGDTVFVAEQVSHHPPVSAFYVTCPKKGIQVDGHVWAKSKFLGNSIAVAMIGKGVLK 190 (392)
T ss_pred cCCCCccchhhcccccccCCCCCCceEEEEeecccCCCCcceeeEEccccCeEEEEEEeecccccccceeEEEcCCcEEE
Confidence 88999999999999883 2 34899999999999999999865 6999999999999999999999999999999
Q ss_pred ec-CCcEEEecccceeeeeeecceeeEeecceEEEEcC-CcceEEEEEeecCCCCCCCceEEEEEEecC-CcEEEEEeee
Q 003654 582 FD-DGEIFQWSKVTTSIYNLILGKLYCDHYGTMRIDGN-REYSCKLKFKEQSIIDRNPHQVQGVVQDKN-GKTVATLFGK 658 (805)
Q Consensus 582 f~-~ge~Y~~~~pt~~i~nii~G~~~~e~~G~~~I~~~-~g~~~~i~F~~~~~f~~~~~~V~G~V~d~~-g~~~~~i~G~ 658 (805)
|. .+|+|.++.|...+.||++|.+|+++.|+++|.|+ +++.+.+.|+.++|+|+..+.+.|.|+... .+..+.|+|+
T Consensus 191 ll~~~E~Y~~t~P~~~~rg~~~~~p~velggkv~I~c~kt~~~a~~~~~~~~f~g~~~s~~~~~ik~~~~~~~~~~i~G~ 270 (392)
T KOG2210|consen 191 LLDHDETYLITFPNAYARGILLGAPWVELGGKVVIECPKTGLSAILESILKPFLGGKNSFNARSIKGPIDKKDFCSISGE 270 (392)
T ss_pred EEecCcceeeccCCceeeeeeeccceEecCceEEEEcCCcceeeeEeeccCcccccccccceEEEEccccccccccccee
Confidence 86 49999999999999999999999999999999995 799999999999999999999999999643 4456789999
Q ss_pred ecceeEEEeCCCCCCCCCCcceEEEecCCCCccccccccccceeeccCCChhhhcCCCCCCCCC--hHhHHHHHcCChHH
Q 003654 659 WDESMHFMNGDGSGKGKGSELQLLWKRSKPPKYQTRYNFSRFAITLNELSPELKEKLPPTDSRL--RPDQRCLENGEYDM 736 (805)
Q Consensus 659 Wd~~l~~~~~~~~~~~k~~~~~~lW~~~~~~~~~~~y~ft~fa~~LNe~~~~~~~~l~pTDSR~--RpD~raLe~Gd~d~ 736 (805)
||+.|+++..+.. . .|...... .+....-.+.| .+.+-|.+||. +++++||..||++.
T Consensus 271 W~~~~~~k~~~~~-------~--~~~~~d~~---------~~~~~~~~v~p--LeEQ~e~ESrrlWk~Vt~ai~~~d~~~ 330 (392)
T KOG2210|consen 271 WDGVMYAKYAKSG-------E--SRNFVDCK---------KLPVTKPKVRP--LEEQGEYESRRLWKEVTEAILAGDIEQ 330 (392)
T ss_pred ecccEEEEEcCCC-------c--eeeccccc---------ccCcCCCCcCC--hHHcCcHHHHHHHHHHHHHHHhccHHH
Confidence 9999999776531 1 22222111 11111111122 34568899985 68999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCCccceeEecCCCCcEEEcCChhh
Q 003654 737 ANAEKLRLEQRQRQARTMQE---RGWKPRWFTKDKGSGTYRYIGGYWE 781 (805)
Q Consensus 737 A~~eK~rLEe~QR~~Rk~re---~~w~P~~F~~~~~~~~~~y~g~YWe 781 (805)
|+++|..|||+||++||+|+ ..|+|+||..+++++.|.|...-|.
T Consensus 331 Ate~K~~iEe~QR~~ak~ree~g~~W~pk~F~~~~~~~~~~~~~~~~~ 378 (392)
T KOG2210|consen 331 ATEEKFELEEKQRELAKKREESGEEWKPKLFKVDEDGGDWDYRNYLPK 378 (392)
T ss_pred HhHHHhHHHHHHHHHHHHHHHhCCcceecceeEcCCCCCccccccccC
Confidence 99999999999999988775 4699999999988889999876554
No 5
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.89 E-value=9.1e-23 Score=183.75 Aligned_cols=89 Identities=40% Similarity=0.683 Sum_probs=78.8
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccc
Q 003654 109 ISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKV 188 (805)
Q Consensus 109 ~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ 188 (805)
++|||+||||+.|+||+|||||++|+|+||+++.+. ...|+|.|+|+.
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~--------------------------------~~~~~G~I~L~~ 48 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEK--------------------------------SHGCRGSIFLKK 48 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccC--------------------------------cCCCcEEEECcc
Confidence 369999999999999999999999999999997641 013689999999
Q ss_pred eEEEecCCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHH
Q 003654 189 ASIRESKSDDKKFSIYTGT-KRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 189 ~si~~~~~d~~~F~I~t~~-kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
|.|.....+.++|.|.++. ++|+|+|+|++||+.||+||+.
T Consensus 49 ~~i~~~~~~~~~F~i~~~~~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 49 AIIAAHEFDENRFDISVNENVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred cEEEcCCCCCCEEEEEeCCCeEEEEEeCCHHHHHHHHHHHhh
Confidence 9998776778999997766 9999999999999999999984
No 6
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.84 E-value=1e-20 Score=171.69 Aligned_cols=89 Identities=29% Similarity=0.514 Sum_probs=77.9
Q ss_pred eEEEEEeecC--CCCCceeeEEEEe--CCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 109 ISGILFKWVN--YGRGWRPRWFVLK--EGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 109 ~~G~L~K~~n--~~kgWr~RWFVL~--~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
++|||+|+++ ..|+||+|||||+ +++|+||+++.+ .+|+|.|
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d----------------------------------~~p~G~I 46 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQD----------------------------------AKPLGRV 46 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCc----------------------------------ccccceE
Confidence 4799999986 5899999999997 468999998764 2478999
Q ss_pred EccceEEEecCCC-CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 185 HLKVASIRESKSD-DKKFSIYTGTKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 185 ~L~~~si~~~~~d-~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
+|..+++.....+ ++.|.|.|++|+|+|+|+|++||+.||+||+.++
T Consensus 47 ~L~~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~~~ 94 (95)
T cd01265 47 DLSGAAFTYDPREEKGRFEIHSNNEVIALKASSDKQMNYWLQALQSKR 94 (95)
T ss_pred ECCccEEEcCCCCCCCEEEEEcCCcEEEEECCCHHHHHHHHHHHHhhc
Confidence 9999887755544 7899999999999999999999999999999875
No 7
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.80 E-value=7.2e-20 Score=171.13 Aligned_cols=110 Identities=47% Similarity=0.788 Sum_probs=60.1
Q ss_pred eEEEEEeecCC-CCCceeeEEEEe-CCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 109 ISGILFKWVNY-GRGWRPRWFVLK-EGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 109 ~~G~L~K~~n~-~kgWr~RWFVL~-~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
++|||+||+|+ ++|||+|||||. ||+|+|||++.+ ..+.+|++..+.+.+.+..............++.
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRD---------KKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKD 71 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS----------------------TT-SB-SEEEE---GGGT-EEEES
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccc---------cccccccccchhceEeecccCccccccccccccc
Confidence 58999999999 999999999999 999999999554 2345666655533332222221111111111111
Q ss_pred cceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 187 KVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 187 ~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
. . .....+.+.|.|+|++|+|||+|+|.+|+.+||+||+.|
T Consensus 72 ~-~--~~~~~~~~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 72 K-N--PFGEIHLKVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp --T----SS-SSEEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred C-C--cccCcCCCCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 1 0 112345678899999999999999999999999999986
No 8
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.78 E-value=9.9e-19 Score=161.08 Aligned_cols=90 Identities=27% Similarity=0.455 Sum_probs=74.7
Q ss_pred eEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 109 ISGILFKWVNY-GRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 109 ~~G~L~K~~n~-~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
++|||.|+|.. .++||+|||||+++.|+||+++.+ ..|.|+|.|.
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d----------------------------------~~~~G~I~L~ 46 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLD----------------------------------AFAKGEVFLG 46 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCC----------------------------------cCcCcEEEee
Confidence 47999999986 699999999999999999998764 1367999997
Q ss_pred ce----EEEec-----CCC-CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 188 VA----SIRES-----KSD-DKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 188 ~~----si~~~-----~~d-~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
.+ +|... ..+ ...|.|.|+.|+|+|+|+|++||..||+||+.|+.
T Consensus 47 ~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 47 SQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred ccccceeEeccCCccccccccceEEEEeCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 43 34322 112 23899999999999999999999999999999975
No 9
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.78 E-value=1.5e-18 Score=158.98 Aligned_cols=91 Identities=21% Similarity=0.380 Sum_probs=79.8
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
+.++|||.|+++..+.|++|||||+++.|+||+++.+ ..|.|.|.|
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~----------------------------------~~~~~~I~L 47 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKD----------------------------------PVERGVINL 47 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCC----------------------------------ccEeeEEEe
Confidence 5688999999999999999999999999999999764 136799999
Q ss_pred cceEEEecCC------CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 187 KVASIRESKS------DDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 187 ~~~si~~~~~------d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
..+.|..... .++.|.|.++.|+|+|+|+|++|++.||+||+.+.
T Consensus 48 ~~~~v~~~~~~~~~~~~~~~F~I~t~~rt~~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 48 STARVEHSEDQAAMVKGPNTFAVCTKHRGYLFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred cccEEEEccchhhhcCCCcEEEEECCCCEEEEEcCCHHHHHHHHHHhhhhh
Confidence 9887765543 35789999999999999999999999999998764
No 10
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.74 E-value=7.7e-18 Score=153.98 Aligned_cols=89 Identities=22% Similarity=0.374 Sum_probs=74.9
Q ss_pred eEEEEEeecC---CCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEE
Q 003654 109 ISGILFKWVN---YGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIH 185 (805)
Q Consensus 109 ~~G~L~K~~n---~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~ 185 (805)
++|||.|.++ ..|.|++|||||+++.|+|||.+.. .+.+.|+|+
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~---------------------------------~~~~~g~Id 48 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSK---------------------------------DDPDDCSID 48 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCc---------------------------------cCCCCceEE
Confidence 6899999998 8999999999999999999998653 112459999
Q ss_pred ccceEE-EecCC------CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 186 LKVASI-RESKS------DDKKFSIYTGTKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 186 L~~~si-~~~~~------d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
|..|.. ..... .++.|.|.|++|||+|+|+|++++++||++|+.|
T Consensus 49 L~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 49 LSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred cccceEEeeccccccccccCcEEEEEcCCceEEEEeCCHHHHHHHHHHHHhh
Confidence 998763 33221 1368999999999999999999999999999976
No 11
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.74 E-value=8e-18 Score=149.92 Aligned_cols=86 Identities=36% Similarity=0.630 Sum_probs=76.8
Q ss_pred EEEEee-cCCCCCceeeEEEE--eCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 111 GILFKW-VNYGRGWRPRWFVL--KEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 111 G~L~K~-~n~~kgWr~RWFVL--~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
|||.|+ ++.++||++||||| .+|+|+||+++.+ .+++|+|+|.
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~----------------------------------~~~rGsi~v~ 46 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNS----------------------------------GKLRGSIDVS 46 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCC----------------------------------CeeEeEEEcc
Confidence 788887 68999999999999 9999999998664 1367999999
Q ss_pred ceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 188 VASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 188 ~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
.+.|... .+.++|.|.+++..|||+|.|.+|++.||.||+.|+
T Consensus 47 ~a~is~~-~~~~~I~idsg~~i~hLKa~s~~~f~~Wv~aL~~a~ 89 (89)
T PF15409_consen 47 LAVISAN-KKSRRIDIDSGDEIWHLKAKSQEDFQRWVSALQKAK 89 (89)
T ss_pred ceEEEec-CCCCEEEEEcCCeEEEEEcCCHHHHHHHHHHHHhcC
Confidence 9988765 468899999999999999999999999999999874
No 12
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.73 E-value=1.7e-17 Score=151.17 Aligned_cols=88 Identities=28% Similarity=0.529 Sum_probs=72.5
Q ss_pred EEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 110 SGILFKWVNYGRGWRPRWFVLK--EGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 110 ~G~L~K~~n~~kgWr~RWFVL~--~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
+|||+|+++..++|++|||||. ++.|+||+++.+ .+|+|.|+|.
T Consensus 2 ~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~----------------------------------~~~~g~I~L~ 47 (101)
T cd01235 2 EGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFED----------------------------------TAEKGCIDLA 47 (101)
T ss_pred eEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCC----------------------------------CccceEEEcc
Confidence 6999999999999999999998 569999998654 2478999999
Q ss_pred ceE-EEecC---------CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 188 VAS-IRESK---------SDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 188 ~~s-i~~~~---------~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
.+. |.... .....|.|.++.|+|+|+|+|.+|++.||.||+.++
T Consensus 48 ~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 48 EVKSVNLAQPGMGAPKHTSRKGFFDLKTSKRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred eeEEEeecCCCCCCCCCCCCceEEEEEeCCceEEEECCCHHHHHHHHHHHHhhC
Confidence 754 33211 123457888999999999999999999999999874
No 13
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.73 E-value=1.9e-17 Score=153.38 Aligned_cols=90 Identities=27% Similarity=0.340 Sum_probs=72.6
Q ss_pred eeEEEEEeecCC-----CCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccce
Q 003654 108 GISGILFKWVNY-----GRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVG 182 (805)
Q Consensus 108 ~~~G~L~K~~n~-----~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G 182 (805)
+++|||+|++.. .++||+|||||+++.|+||+++.+. ...|+|
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~--------------------------------~~~~kG 48 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEK--------------------------------RGSKKG 48 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCccc--------------------------------ccCcce
Confidence 368999999732 2489999999999999999986641 123789
Q ss_pred EEEccceEEEec-C---------CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003654 183 EIHLKVASIRES-K---------SDDKKFSIYTGTKRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 183 ~I~L~~~si~~~-~---------~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
+|+|..+.+.+. . .+.+.|.|.++.++|+|.|+|++||++||+||+.
T Consensus 49 ~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 49 SIDLSKIKCVETVKPEKNPPIPERFKYPFQVVHDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred eEECCcceEEEEecCCcCcccccccCccEEEEeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 999997754321 1 1356799999999999999999999999999985
No 14
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.71 E-value=6.5e-17 Score=143.56 Aligned_cols=90 Identities=50% Similarity=0.914 Sum_probs=79.5
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccc
Q 003654 109 ISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKV 188 (805)
Q Consensus 109 ~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ 188 (805)
++|||+|+++..++|++|||||+++.|+||+++.+.. ..|.|.|+|..
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~~--------------------------------~~~~~~i~l~~ 48 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSMR--------------------------------GKPRGTILLSG 48 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCccCC--------------------------------CCceEEEEece
Confidence 5799999998889999999999999999999976410 13679999999
Q ss_pred eEEEecCCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003654 189 ASIRESKSDDKKFSIYTGT-KRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 189 ~si~~~~~d~~~F~I~t~~-kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
+.+.....+...|.|.++. ++|+|+|+|.+|+.+||.||+.|
T Consensus 49 ~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 49 AVISEDDSDDKCFTIDTGGDKTLHLRANSEEERQRWVDALELA 91 (91)
T ss_pred EEEEECCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHhC
Confidence 9888776678899999887 99999999999999999999875
No 15
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.70 E-value=7.2e-17 Score=146.21 Aligned_cols=88 Identities=30% Similarity=0.499 Sum_probs=74.2
Q ss_pred eEEEEEeecCCC----CCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 109 ISGILFKWVNYG----RGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 109 ~~G~L~K~~n~~----kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
++|||+|++..+ +.|++|||||.++.|+||+++.+. +|.|.|
T Consensus 2 ~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~----------------------------------~~~~~I 47 (96)
T cd01260 2 CDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDE----------------------------------KAEGLI 47 (96)
T ss_pred ceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCC----------------------------------ccceEE
Confidence 579999998644 489999999999999999987651 356999
Q ss_pred EccceEEEecCC--CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003654 185 HLKVASIRESKS--DDKKFSIYTGT-KRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 185 ~L~~~si~~~~~--d~~~F~I~t~~-kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
.|..+.|..... ...+|.|.++. ++|+|+|+|.+|++.||.||+.|
T Consensus 48 ~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 48 FLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred EccCCEEEEchhcCCceEEEECCCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 999888764422 35678998887 99999999999999999999875
No 16
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.67 E-value=4.5e-16 Score=148.11 Aligned_cols=92 Identities=25% Similarity=0.484 Sum_probs=77.6
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccc
Q 003654 109 ISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKV 188 (805)
Q Consensus 109 ~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ 188 (805)
++|||+|+++..++|++|||||.++.|+||++..+ .+|.|.|+|..
T Consensus 2 k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~----------------------------------~~~~g~I~L~~ 47 (125)
T cd01252 2 REGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------KEPRGIIPLEN 47 (125)
T ss_pred cEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCCC----------------------------------CCceEEEECCC
Confidence 57999999999999999999999999999998654 13689999998
Q ss_pred eEEEecCC--CCccEEEEeCC---------------------eEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 189 ASIRESKS--DDKKFSIYTGT---------------------KRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 189 ~si~~~~~--d~~~F~I~t~~---------------------kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
+.|..... ....|.|.+++ ++|+|+|+|.+|+++||+||+.++..-
T Consensus 48 ~~v~~~~~~~~~~~F~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~~ 116 (125)
T cd01252 48 VSIREVEDPSKPFCFELFSPSDKQQIKACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISPN 116 (125)
T ss_pred cEEEEcccCCCCeeEEEECCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 88765533 45678877644 588999999999999999999998744
No 17
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.67 E-value=2.9e-16 Score=144.66 Aligned_cols=87 Identities=25% Similarity=0.462 Sum_probs=69.8
Q ss_pred EEEEEeecC---------CCCCceeeEEEEe-CCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCc
Q 003654 110 SGILFKWVN---------YGRGWRPRWFVLK-EGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRI 179 (805)
Q Consensus 110 ~G~L~K~~n---------~~kgWr~RWFVL~-~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 179 (805)
+|||+|... ..|+||+|||||+ ++.|+||+....+ .+
T Consensus 2 ~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~---------------------------------~~ 48 (104)
T cd01236 2 CGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPT---------------------------------TL 48 (104)
T ss_pred cceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCC---------------------------------cc
Confidence 699999852 3789999999997 6888888764321 24
Q ss_pred cceEEEccceEEEecCCC----CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003654 180 PVGEIHLKVASIRESKSD----DKKFSIYTGTKRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 180 p~G~I~L~~~si~~~~~d----~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
|.|+|+|..|.......+ .+.|.|.|+.|+|+|.|+|++|++.||++|..
T Consensus 49 p~G~IdL~~~~~V~~~~~~~~~~~~f~I~tp~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 49 PQGTIDMNQCTDVVDAEARTGQKFSICILTPDKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred cceEEEccceEEEeecccccCCccEEEEECCCceEEEEeCCHHHHHHHHHHHHh
Confidence 789999998875433322 46799999999999999999999999999864
No 18
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.66 E-value=8e-16 Score=141.15 Aligned_cols=90 Identities=24% Similarity=0.372 Sum_probs=72.9
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEeCC------eEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCcc
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLKEG------VLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIP 180 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~~g------~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p 180 (805)
+.++|||.|+ |.||+|||||+++ .|.||+++.. . ..+..+|
T Consensus 2 v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~---~--------------------------~~~~~~p 48 (101)
T cd01257 2 VRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKK---F--------------------------LQKGSAP 48 (101)
T ss_pred ccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhh---c--------------------------cccCCCc
Confidence 6789999998 8999999999877 8999998653 0 0112458
Q ss_pred ceEEEccceEEEecCCC---CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003654 181 VGEIHLKVASIRESKSD---DKKFSIYTGTKRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 181 ~G~I~L~~~si~~~~~d---~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
.|.|+|..|.......| .+.|.|.|+.++|.|.|+|++|++.||+||..
T Consensus 49 ~~vI~L~~c~~v~~~~d~k~~~~f~i~t~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 49 KRVIPLESCFNINKRADAKHRHLIALYTRDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred eEEEEccceEEEeeccccccCeEEEEEeCCceEEEEeCCHHHHHHHHHHHhh
Confidence 99999999874433222 46789999999999999999999999999863
No 19
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.65 E-value=7.5e-16 Score=143.03 Aligned_cols=87 Identities=28% Similarity=0.362 Sum_probs=70.1
Q ss_pred eEEEEEeecCCCC----CceeeEEEEeCCe-------EEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCC
Q 003654 109 ISGILFKWVNYGR----GWRPRWFVLKEGV-------LSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQ 177 (805)
Q Consensus 109 ~~G~L~K~~n~~k----gWr~RWFVL~~g~-------LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~ 177 (805)
++|||.|++...+ +||+|||||+++. |+||+++.+
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~---------------------------------- 46 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRK---------------------------------- 46 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCC----------------------------------
Confidence 3699999998554 9999999998875 699998654
Q ss_pred CccceEEEccceEEEecC----CCC----ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003654 178 RIPVGEIHLKVASIRESK----SDD----KKFSIYTGTKRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 178 ~~p~G~I~L~~~si~~~~----~d~----~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
.+|.|.|+|..+.+.... ... ..|.|.++.|+|+|.|+|++||+.||.||+.
T Consensus 47 ~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~ 106 (108)
T cd01266 47 FKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDIETIVRDLYLVAKNEEEMTLWVNCICK 106 (108)
T ss_pred CccceEEECCccEEEcccccccccCcccceEEEEEeCCccEEEEECCHHHHHHHHHHHHh
Confidence 247899999987654321 112 2488999999999999999999999999964
No 20
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.62 E-value=2.2e-15 Score=134.56 Aligned_cols=90 Identities=31% Similarity=0.581 Sum_probs=74.5
Q ss_pred eEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 109 ISGILFKWVNY-GRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 109 ~~G~L~K~~n~-~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
++|||+|++.. .++|++|||||.++.|.||++..+.+ ..+.|.|+|.
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~~--------------------------------~~~~~~i~l~ 48 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDYD--------------------------------NAHVKEIDLR 48 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcccc--------------------------------cccceEEecc
Confidence 47999999865 78899999999999999999865310 1256899999
Q ss_pred ceEEEecCC---CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 188 VASIRESKS---DDKKFSIYTGTKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 188 ~~si~~~~~---d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
.++|..... ....|.|.++.++|+|+|+|.++++.||.||+.+
T Consensus 49 ~~~v~~~~~~~~~~~~f~i~~~~~~~~f~a~s~~~~~~Wi~al~~~ 94 (94)
T cd01250 49 RCTVRHNGKQPDRRFCFEVISPTKTWHFQADSEEERDDWISAIQES 94 (94)
T ss_pred ceEEecCccccCCceEEEEEcCCcEEEEECCCHHHHHHHHHHHhcC
Confidence 877765443 3568999999999999999999999999999863
No 21
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.58 E-value=1e-14 Score=134.16 Aligned_cols=93 Identities=26% Similarity=0.442 Sum_probs=66.3
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEE
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLK-EGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIH 185 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~-~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~ 185 (805)
+.++|||.|+++..++|++|||||+ ++.|.||+....+. . ....|.+.+.
T Consensus 1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~~-~----------------------------~~~i~l~~~~ 51 (102)
T cd01241 1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPEDG-D----------------------------PFLPPLNNFS 51 (102)
T ss_pred CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCCcc-C----------------------------ccccccCCeE
Confidence 3689999999999999999999998 88999999755311 0 0011334445
Q ss_pred ccceEEEe-cCCCCccEEEE------eCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 186 LKVASIRE-SKSDDKKFSIY------TGTKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 186 L~~~si~~-~~~d~~~F~I~------t~~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
|..|.+.. .......|.|. +..|+| .|+|++||+.||.||+.+
T Consensus 52 v~~~~~~~~~~~~~~~F~i~~~~~~~~~~r~f--~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 52 VAECQLMKTERPRPNTFIIRCLQWTTVIERTF--HVESPEEREEWIHAIQTV 101 (102)
T ss_pred EeeeeeeeccCCCcceEEEEeccCCcccCEEE--EeCCHHHHHHHHHHHHhh
Confidence 55554432 22345689987 234555 599999999999999876
No 22
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.55 E-value=1.5e-14 Score=131.88 Aligned_cols=85 Identities=26% Similarity=0.328 Sum_probs=73.7
Q ss_pred EEEEEeecCC-CCCceeeEEEEeC----CeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 110 SGILFKWVNY-GRGWRPRWFVLKE----GVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 110 ~G~L~K~~n~-~kgWr~RWFVL~~----g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
.|||.|+|+. .|.||+|||+|.+ +.|+||+.+.+ .+|+|.|
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~----------------------------------~~p~gli 47 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKK----------------------------------TKPIGLI 47 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCC----------------------------------CCcccee
Confidence 4999999987 9999999999986 99999998775 2478999
Q ss_pred EccceEEEecCC----CCccEEEEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 003654 185 HLKVASIRESKS----DDKKFSIYTGTK--RVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 185 ~L~~~si~~~~~----d~~~F~I~t~~k--t~~L~A~s~~dr~~Wi~AL~~ 229 (805)
+|..+.|....+ .+++|.|.++.+ +|+++|++ +||++||++|+.
T Consensus 48 ~l~~~~V~~v~ds~~~r~~cFel~~~~~~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 48 DLSDAYLYPVHDSLFGRPNCFQIVERALPTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred eccccEEEEccccccCCCeEEEEecCCCCeEEEEeCCH-HHHHHHHHHHhc
Confidence 999998876432 368999999876 99999999 999999999985
No 23
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.54 E-value=9.8e-14 Score=123.90 Aligned_cols=94 Identities=30% Similarity=0.503 Sum_probs=79.9
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
++++|||+|++...++|++|||||.++.|+||++..+. ....|.+.|.|
T Consensus 1 ~~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~-------------------------------~~~~~~~~i~l 49 (104)
T PF00169_consen 1 CIKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDK-------------------------------SDSKPKGSIPL 49 (104)
T ss_dssp EEEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTT-------------------------------TESSESEEEEG
T ss_pred CEEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccc-------------------------------cceeeeEEEEe
Confidence 36899999999889999999999999999999986630 11247899999
Q ss_pred cceEEEecCC--------CCccEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 003654 187 KVASIRESKS--------DDKKFSIYTGTK-RVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 187 ~~~si~~~~~--------d~~~F~I~t~~k-t~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
..+.|..... ..+.|.|.+..+ +|+|+|+|.+++..||+||+.|.
T Consensus 50 ~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 50 DDCTVRPDPSSDFLSNKKRKNCFEITTPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp TTEEEEEETSSTSTSTSSSSSEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cCceEEEcCccccccccCCCcEEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 9998875433 467899999875 99999999999999999999885
No 24
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.50 E-value=1.2e-13 Score=126.28 Aligned_cols=85 Identities=18% Similarity=0.179 Sum_probs=67.4
Q ss_pred EEEEeec----CCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 111 GILFKWV----NYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 111 G~L~K~~----n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
|.|.|+. ...++|++|||+|.+..|+||+++.+ +|.|+|+|
T Consensus 5 ~~~~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y~k~~~~-----------------------------------~~~g~I~L 49 (98)
T cd01244 5 LQQVDRSRLAWKKVLHFKKRYFQLTTTHLSWAKDVQC-----------------------------------KKSALIKL 49 (98)
T ss_pred cEEEEcccCCCccCcCCceeEEEECCCEEEEECCCCC-----------------------------------ceeeeEEc
Confidence 5556654 23578999999999999999997552 47899999
Q ss_pred cceEEEec-CC----CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 187 KVASIRES-KS----DDKKFSIYTGTKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 187 ~~~si~~~-~~----d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
+.....+. .+ ..+.|.|+++.++|+|.|+|++||++||.||+.+
T Consensus 50 ~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi~al~k~ 98 (98)
T cd01244 50 AAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWLNALEKQ 98 (98)
T ss_pred cceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHHHHHhcC
Confidence 87654322 22 2357999999999999999999999999999853
No 25
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.46 E-value=5.6e-13 Score=122.47 Aligned_cols=96 Identities=16% Similarity=0.233 Sum_probs=80.1
Q ss_pred eeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 108 GISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 108 ~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
+++|||+|.+...++||+|||.|-+++|.|++.... . .+..-++++.|+|.
T Consensus 3 ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~---~--------------------------~~~~y~~~~~i~l~ 53 (101)
T cd01219 3 LKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKM---I--------------------------GGSKFKVRARIDVS 53 (101)
T ss_pred ccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccc---c--------------------------CCCcEEEEEEEecc
Confidence 578999999999999999999998889999996421 0 01123467999999
Q ss_pred ceEEEecC--CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 188 VASIRESK--SDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 188 ~~si~~~~--~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
...|.... ..++.|.|.+..|+|+|.|+|++||..||.||+.|++
T Consensus 54 ~~~v~~~~~~~~~~~F~I~~~~rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 54 GMQVCEGDNLERPHSFLVSGKQRCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred cEEEEeCCCCCcCceEEEecCCcEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 98887543 2478999999999999999999999999999999986
No 26
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.43 E-value=5e-13 Score=126.52 Aligned_cols=92 Identities=25% Similarity=0.452 Sum_probs=70.1
Q ss_pred eeEEEEEe-e-cCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEE
Q 003654 108 GISGILFK-W-VNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIH 185 (805)
Q Consensus 108 ~~~G~L~K-~-~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~ 185 (805)
...|||.- + .+..|.|++|||||+++.|+||+.+.++. ...|.|.|+
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~~-------------------------------~~~Plg~I~ 50 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDEK-------------------------------RKGPTGLID 50 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCccc-------------------------------cCCceEEEE
Confidence 45799984 3 46789999999999999999999877521 135899999
Q ss_pred ccceEEEec-------CCCCccEEEEe--C-----------------CeEE-EEEcCCHHHHHHHHHHHHHH
Q 003654 186 LKVASIRES-------KSDDKKFSIYT--G-----------------TKRV-HLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 186 L~~~si~~~-------~~d~~~F~I~t--~-----------------~kt~-~L~A~s~~dr~~Wi~AL~~a 230 (805)
|..|.+... ....+.|.|.. + .+++ .|.|+|.+||+.||.||+.|
T Consensus 51 L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 51 LSTCTSSEGASAVRDICARPNTFHLDVWRPKMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred hhhCcccccccCChhhcCCCCeEEEEEecccccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 999886433 22467788743 1 1444 58999999999999999854
No 27
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.36 E-value=1.9e-12 Score=134.25 Aligned_cols=96 Identities=27% Similarity=0.513 Sum_probs=79.8
Q ss_pred ceeEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEE
Q 003654 107 HGISGILFKWVN-YGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIH 185 (805)
Q Consensus 107 ~~~~G~L~K~~n-~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~ 185 (805)
+.-+|||.|.++ ..|.|++|||+|.+++|+||.-..| ..|+|.|.
T Consensus 260 pdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTD----------------------------------KEPrGIIp 305 (395)
T KOG0930|consen 260 PDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------KEPRGIIP 305 (395)
T ss_pred ccccceeeeecCCcccchhheeEEeecceeeeeeeccC----------------------------------CCCCccee
Confidence 567899999985 7899999999999999999987554 34899999
Q ss_pred ccceEEEecC--CCCccEEEEeCC----------------------eEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003654 186 LKVASIRESK--SDDKKFSIYTGT----------------------KRVHLRAETREDRVKWMEALQAVKEMFPR 236 (805)
Q Consensus 186 L~~~si~~~~--~d~~~F~I~t~~----------------------kt~~L~A~s~~dr~~Wi~AL~~a~~~~~~ 236 (805)
|..-+|+... ..+.+|.|+.+. ..|.++|.+.+|+..||++|++++++.|-
T Consensus 306 LeNlsir~VedP~kP~cfEly~ps~~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~~Pf 380 (395)
T KOG0930|consen 306 LENLSIREVEDPKKPNCFELYIPSNKGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISRDPF 380 (395)
T ss_pred ccccceeeccCCCCCCeEEEecCCCCcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhccCcH
Confidence 9998887543 347788876532 25999999999999999999999987653
No 28
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.34 E-value=3.6e-12 Score=116.90 Aligned_cols=81 Identities=23% Similarity=0.525 Sum_probs=63.6
Q ss_pred CCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccceEEEecC---
Q 003654 119 YGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKVASIRESK--- 195 (805)
Q Consensus 119 ~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~~si~~~~--- 195 (805)
..|+|++|||+|+++.|+|||++.+.+ ..|.+.|+|.+|.|....
T Consensus 16 ~~K~~KrrwF~lk~~~L~YyK~kee~~--------------------------------~~p~i~lnl~gcev~~dv~~~ 63 (106)
T cd01237 16 TLKGYKQYWFTFRDTSISYYKSKEDSN--------------------------------GAPIGQLNLKGCEVTPDVNVA 63 (106)
T ss_pred hhhhheeEEEEEeCCEEEEEccchhcC--------------------------------CCCeEEEecCceEEccccccc
Confidence 368999999999999999999966411 246788888999886543
Q ss_pred CCCccEEEEeCC----eEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 196 SDDKKFSIYTGT----KRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 196 ~d~~~F~I~t~~----kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
.....|.+.++. ++|+|+|+|++++++||.|++.|-
T Consensus 64 ~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~Wmaa~rlas 103 (106)
T cd01237 64 QQKFHIKLLIPTAEGMNEVWLRCDNEKQYAKWMAACRLAS 103 (106)
T ss_pred ccceEEEEecCCccCCeEEEEECCCHHHHHHHHHHHHHhh
Confidence 223334455555 999999999999999999999873
No 29
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.31 E-value=7.5e-12 Score=118.76 Aligned_cols=75 Identities=20% Similarity=0.463 Sum_probs=58.7
Q ss_pred CceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccc-eEEEecC-----
Q 003654 122 GWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKV-ASIRESK----- 195 (805)
Q Consensus 122 gWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~-~si~~~~----- 195 (805)
+|++|||||+++.|.||+++.+ .+|+|+|.|.. ..|....
T Consensus 32 ~w~kRWFvlr~s~L~Y~~~~~~----------------------------------~~~~~vil~D~~f~v~~~~~~~~~ 77 (121)
T cd01254 32 RWQKRWFIVKESFLAYMDDPSS----------------------------------AQILDVILFDVDFKVNGGGKEDIS 77 (121)
T ss_pred CCcceeEEEeCCEEEEEcCCCC----------------------------------CceeeEEEEcCCccEEeCCccccc
Confidence 6999999999999999998664 13557666642 2233211
Q ss_pred ---------CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 196 ---------SDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 196 ---------~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
...+.|.|.+++|+|+|.|+|+.++++||++|+.|
T Consensus 78 ~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 78 LAVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred ccccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 22467899999999999999999999999999875
No 30
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.29 E-value=3.8e-11 Score=105.27 Aligned_cols=93 Identities=32% Similarity=0.546 Sum_probs=77.8
Q ss_pred eeEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 108 GISGILFKWVN-YGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 108 ~~~G~L~K~~n-~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
.++|||+++.. ....|++|||+|.++.|.||+...... ...+.+.|.|
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~-------------------------------~~~~~~~i~l 50 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKK-------------------------------DYKPKGSIDL 50 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccc-------------------------------cCCCceEEEC
Confidence 57899999997 667899999999999999999865311 0236799999
Q ss_pred cceEEEecCC-----CCccEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 003654 187 KVASIRESKS-----DDKKFSIYTGTK-RVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 187 ~~~si~~~~~-----d~~~F~I~t~~k-t~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
..+.|..... ....|.|.+..+ +|+|+|+|.++++.|+.+|+.+.
T Consensus 51 ~~~~v~~~~~~~~~~~~~~f~l~~~~~~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 51 SGITVREAPDPDSAKKPHCFEIKTADRRSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred CcCEEEeCCCCccCCCceEEEEEecCCceEEEEcCCHHHHHHHHHHHHHhh
Confidence 9988776554 367899998887 99999999999999999999875
No 31
>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]
Probab=99.24 E-value=2.4e-11 Score=134.01 Aligned_cols=94 Identities=36% Similarity=0.618 Sum_probs=86.4
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
+.++|+|.||+||..||+.|||||++|.|+||++... ..|+| ||.|-|
T Consensus 24 ~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E------------------------------~~hGc--Rgsi~l 71 (611)
T KOG1739|consen 24 VERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDE------------------------------TEHGC--RGSICL 71 (611)
T ss_pred hhhcceeeeeecccccccceEEEEcccchhhhhhhhh------------------------------hhccc--ceeeEe
Confidence 6788999999999999999999999999999998653 13444 799999
Q ss_pred cceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 187 KVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 187 ~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
+.+.|..+..|.++|.|.++...+.|+|.+...++.|+++|+-.+.
T Consensus 72 ~ka~i~ahEfDe~rfdIsvn~nv~~lra~~~~hr~~w~d~L~wmk~ 117 (611)
T KOG1739|consen 72 SKAVITAHEFDECRFDISVNDNVWYLRAQDPDHRQQWIDALEWMKT 117 (611)
T ss_pred ccCCcccccchhheeeeEeccceeeehhcCcHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999998887
No 32
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.17 E-value=1.3e-10 Score=106.79 Aligned_cols=92 Identities=20% Similarity=0.234 Sum_probs=65.4
Q ss_pred eEEEEEee-c-------CCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCcc
Q 003654 109 ISGILFKW-V-------NYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIP 180 (805)
Q Consensus 109 ~~G~L~K~-~-------n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p 180 (805)
++|+|+.+ . ...+.|++|||||+++.|+||++....... ...
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~~~------------------------------~~~ 50 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAAEN------------------------------VHG 50 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccccC------------------------------CCC
Confidence 36888843 2 146789999999999999999986531100 000
Q ss_pred ceEEEccceEEEecCC---CCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 181 VGEIHLKVASIRESKS---DDKKFSIYT-GTKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 181 ~G~I~L~~~si~~~~~---d~~~F~I~t-~~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
...|+|..+.|....+ ....|.|.+ ++++|.|+|+|.++++.||.||+++
T Consensus 51 ~~~i~l~~~~i~~~~~~~k~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~aL~~~ 104 (104)
T cd01253 51 EPPVDLTGAQCEVASDYTKKKHVFRLRLPDGAEFLFQAPDEEEMSSWVRALKSA 104 (104)
T ss_pred CCcEeccCCEEEecCCcccCceEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 1267776666544322 357798865 4599999999999999999999864
No 33
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.13 E-value=5.1e-10 Score=102.61 Aligned_cols=93 Identities=24% Similarity=0.344 Sum_probs=67.7
Q ss_pred eeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 108 GISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 108 ~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
+.+|+|+|....+ .|+ |+|.|-+..|-|+.....++ ..-+++|.|.|.
T Consensus 3 ikEG~L~K~~~k~-~~~-R~~FLFnD~LlY~~~~~~~~------------------------------~~y~~~~~i~L~ 50 (99)
T cd01220 3 IRQGCLLKLSKKG-LQQ-RMFFLFSDLLLYTSKSPTDQ------------------------------NSFRILGHLPLR 50 (99)
T ss_pred eeEEEEEEEeCCC-Cce-EEEEEccceEEEEEeecCCC------------------------------ceEEEEEEEEcC
Confidence 5789999987632 455 55555444555554322101 011367999999
Q ss_pred ceEEEecCCC---CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 188 VASIRESKSD---DKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 188 ~~si~~~~~d---~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
...|.....+ .++|.|.++.++|.|.|.|.+|+++||++|+.|++
T Consensus 51 ~~~V~~~~~~~~~~~~F~I~~~~ks~~l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 51 GMLTEESEHEWGVPHCFTIFGGQCAITVAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred ceEEeeccCCcCCceeEEEEcCCeEEEEECCCHHHHHHHHHHHHHHhh
Confidence 9988755442 68999999999999999999999999999999975
No 34
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.12 E-value=3e-10 Score=98.57 Aligned_cols=91 Identities=41% Similarity=0.656 Sum_probs=75.4
Q ss_pred eEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 109 ISGILFKWVNYG-RGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 109 ~~G~L~K~~n~~-kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
++|||+++.... ..|++|||+|.++.|.+|+...+.. ...+.+.|.|.
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~-------------------------------~~~~~~~i~l~ 49 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKK-------------------------------SYKPKGSIPLS 49 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCc-------------------------------CCCCcceEEcC
Confidence 369999998765 7899999999999999998755311 12467999999
Q ss_pred ceEEEecCCC---CccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003654 188 VASIRESKSD---DKKFSIYTGT-KRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 188 ~~si~~~~~d---~~~F~I~t~~-kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
.+.|...... .+.|.|.+.. +.|+|+|+|.+|+..|+.+|+.|
T Consensus 50 ~~~v~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 50 GAEVEESPDDSGRKNCFEIRTPDGRSYLLQAESEEEREEWIEALQSA 96 (96)
T ss_pred CCEEEECCCcCCCCcEEEEecCCCcEEEEEeCCHHHHHHHHHHHhcC
Confidence 9888766553 6889998887 99999999999999999999864
No 35
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=99.11 E-value=2.4e-11 Score=141.72 Aligned_cols=97 Identities=28% Similarity=0.440 Sum_probs=78.2
Q ss_pred CCcCCCceeEEEEEeecCCCCCceeeEEEE--eCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCC
Q 003654 101 MLFADQHGISGILFKWVNYGRGWRPRWFVL--KEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQR 178 (805)
Q Consensus 101 s~pa~~~~~~G~L~K~~n~~kgWr~RWFVL--~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 178 (805)
+.|+...+.+|||||+|..+|+|++||||| ....|+||....+ .
T Consensus 1628 s~~teNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~ed----------------------------------t 1673 (1732)
T KOG1090|consen 1628 SPPTENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFED----------------------------------T 1673 (1732)
T ss_pred CCcccccCcccchhhcchhhcccccceeEecCCccceeeeccccc----------------------------------c
Confidence 344445566899999999999999999999 5689999998664 2
Q ss_pred ccceEEEccce-E---EEecCCCCcc-EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 179 IPVGEIHLKVA-S---IRESKSDDKK-FSIYTGTKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 179 ~p~G~I~L~~~-s---i~~~~~d~~~-F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
+|+|.|+|..- + +.....|.+. |.+.|..|+|.|+|.+....++|++.||+|.
T Consensus 1674 ~pkG~IdLaevesv~~~~~k~vdekgffdlktt~rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1674 KPKGCIDLAEVESVALIGPKTVDEKGFFDLKTTNRVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred cccchhhhhhhhhhcccCccccCccceeeeehhhHHHHHHhccchHHHHHHHHHHHhh
Confidence 47899999732 2 3334445554 5699999999999999999999999999985
No 36
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=98.98 E-value=4.4e-09 Score=91.93 Aligned_cols=87 Identities=31% Similarity=0.540 Sum_probs=70.4
Q ss_pred EEEEEeecCCC----CCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccc-eEE
Q 003654 110 SGILFKWVNYG----RGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPV-GEI 184 (805)
Q Consensus 110 ~G~L~K~~n~~----kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~-G~I 184 (805)
+|||.+++... ..|++|||+|.++.|.||+...+.. +. +.+
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~~----------------------------------~~~~~~ 47 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKKE----------------------------------IKPGSI 47 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCCc----------------------------------CCCCEE
Confidence 59999998764 7899999999999999999865411 11 567
Q ss_pred EccceEEEecCC---CCccEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 185 HLKVASIRESKS---DDKKFSIYTG---TKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 185 ~L~~~si~~~~~---d~~~F~I~t~---~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
.|....|..... .+..|.|.+. .+.++|+|+|.++++.|+.||+.|
T Consensus 48 ~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 48 PLSEISVEEDPDGSDDPNCFAIVTKDRGRRVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred EccceEEEECCCCCCCCceEEEECCCCCcEEEEEEcCCHHHHHHHHHHHhcC
Confidence 777766655443 4688999988 899999999999999999999864
No 37
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=8.6e-10 Score=117.85 Aligned_cols=99 Identities=24% Similarity=0.426 Sum_probs=72.7
Q ss_pred CceeEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 106 QHGISGILFKWVNYGRGWRPRWFVL-KEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 106 ~~~~~G~L~K~~n~~kgWr~RWFVL-~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
.++++|||+|+|.+.|+||+|||+| .||.|-=|+....+.-. ...|..-.
T Consensus 14 ~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~~~-----------------------------~p~pLNnF 64 (516)
T KOG0690|consen 14 DVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEVQP-----------------------------TPEPLNNF 64 (516)
T ss_pred hhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccCCC-----------------------------Ccccccch
Confidence 3789999999999999999999999 78999999986531110 11233333
Q ss_pred EccceE-EEecCCCCccEEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003654 185 HLKVAS-IRESKSDDKKFSIYTG------TKRVHLRAETREDRVKWMEALQAVKEMFP 235 (805)
Q Consensus 185 ~L~~~s-i~~~~~d~~~F~I~t~------~kt~~L~A~s~~dr~~Wi~AL~~a~~~~~ 235 (805)
.++.|. +...+..++.|.|.+- .|||| ++|.++|++|+.|||++.....
T Consensus 65 ~v~~cq~m~~erPrPntFiiRcLQWTTVIERTF~--ves~~eRq~W~~AIq~vsn~l~ 120 (516)
T KOG0690|consen 65 MVRDCQTMKTERPRPNTFIIRCLQWTTVIERTFY--VESAEERQEWIEAIQAVSNRLK 120 (516)
T ss_pred hhhhhhhhhccCCCCceEEEEeeeeeeeeeeeee--cCCHHHHHHHHHHHHHHhhhhh
Confidence 344443 2334567889998763 37776 8999999999999999976543
No 38
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.86 E-value=2e-08 Score=94.78 Aligned_cols=89 Identities=16% Similarity=0.249 Sum_probs=65.3
Q ss_pred CCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccceEEEecCC---
Q 003654 120 GRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKVASIRESKS--- 196 (805)
Q Consensus 120 ~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~~si~~~~~--- 196 (805)
.+.|++||.||+++.|+.||++....... ......-.|.|..+.......
T Consensus 23 ~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~---------------------------~~~~~~~~Isi~~a~~~ia~dy~K 75 (117)
T cd01230 23 KRSWKMFYGILRGLVLYLQKDEHKPGKSL---------------------------SETELKNAISIHHALATRASDYSK 75 (117)
T ss_pred CCcceEEEEEEECCEEEEEccCccccccc---------------------------ccccccceEEeccceeEeeccccC
Confidence 35799999999999999999875311100 000123567777665333322
Q ss_pred CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003654 197 DDKKFSIYTGT-KRVHLRAETREDRVKWMEALQAVKEMFP 235 (805)
Q Consensus 197 d~~~F~I~t~~-kt~~L~A~s~~dr~~Wi~AL~~a~~~~~ 235 (805)
..+.|.|.++. +.|.|+|.+.+||+.||.+|+.+.+.++
T Consensus 76 r~~VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~~s 115 (117)
T cd01230 76 KPHVFRLRTADWREFLFQTSSLKELQSWIERINVVAAAFS 115 (117)
T ss_pred CCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 36789999875 9999999999999999999999998774
No 39
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.71 E-value=7.2e-08 Score=89.06 Aligned_cols=90 Identities=22% Similarity=0.235 Sum_probs=68.2
Q ss_pred CceeEEEEEeecCCCCCceeeEEEEeCC-eEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 106 QHGISGILFKWVNYGRGWRPRWFVLKEG-VLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 106 ~~~~~G~L~K~~n~~kgWr~RWFVL~~g-~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
.+.++|+|.|+.+.. +|+|||+|.++ -|.|+..... ..+|+|
T Consensus 12 ~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~~-----------------------------------~~KGeI 54 (104)
T PF14593_consen 12 LILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKKM-----------------------------------VLKGEI 54 (104)
T ss_dssp -EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTTT-----------------------------------EEEEEE
T ss_pred eEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCCC-----------------------------------eECcEE
Confidence 378999999998877 99999999888 8888886442 135999
Q ss_pred EccceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 185 HLKVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 185 ~L~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
.+.... .....+...|.|.|+.|+|+|... ..+...|++||+.++..+
T Consensus 55 ~~~~~l-~v~~k~~~~F~I~tp~RtY~l~d~-~~~A~~W~~~I~~~~~~~ 102 (104)
T PF14593_consen 55 PWSKEL-SVEVKSFKTFFIHTPKRTYYLEDP-EGNAQQWVEAIEEVKKQY 102 (104)
T ss_dssp --STT--EEEECSSSEEEEEETTEEEEEE-T-TS-HHHHHHHHHHHHHHH
T ss_pred ecCCce-EEEEccCCEEEEECCCcEEEEECC-CCCHHHHHHHHHHHHHHh
Confidence 998542 223355679999999999999874 466888999999998764
No 40
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.69 E-value=1.1e-07 Score=85.47 Aligned_cols=90 Identities=23% Similarity=0.326 Sum_probs=69.7
Q ss_pred ceeEEEEEeec-CCCC-CceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 107 HGISGILFKWV-NYGR-GWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 107 ~~~~G~L~K~~-n~~k-gWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
++-.|||.-.. ..++ |=|.|||||.+.+|+|||...+ ..|+|.|
T Consensus 1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~ee----------------------------------KE~kyil 46 (110)
T cd01256 1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEE----------------------------------KEKKYML 46 (110)
T ss_pred CeeeeeEEeeccceecCCCcceEEEEecceeeeeccccc----------------------------------cccccee
Confidence 35679998764 3444 4899999999999999998654 2378999
Q ss_pred EccceEEEecCC----CCccEEEEeCC--------eEEEEEcCCHHHHHHHHHHHHHH
Q 003654 185 HLKVASIRESKS----DDKKFSIYTGT--------KRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 185 ~L~~~si~~~~~----d~~~F~I~t~~--------kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
.|..-.++.-.. ....|.++.+. |++.|.|+|.++...|...+-.|
T Consensus 47 pLdnLk~Rdve~gf~sk~~~FeLfnpd~rnvykd~k~lel~~~~~e~vdswkasflra 104 (110)
T cd01256 47 PLDGLKLRDIEGGFMSRNHKFALFYPDGRNVYKDYKQLELGCETLEEVDSWKASFLRA 104 (110)
T ss_pred eccccEEEeecccccCCCcEEEEEcCcccccccchheeeecCCCHHHHHHHHHHHHhc
Confidence 998887775433 46788888653 78999999999999998775443
No 41
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.63 E-value=6.1e-08 Score=87.84 Aligned_cols=95 Identities=19% Similarity=0.341 Sum_probs=65.4
Q ss_pred eeEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 108 GISGILFKWVN-YGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 108 ~~~G~L~K~~n-~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
..+|||+|.|. ..|.|++|||||.+ + +-|.-... .. ..+...|.-.|.|
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~q-v-sQYtfamc---sy-------------------------~ekks~P~e~~ql 52 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLVQ-V-SQYTFAMC---SY-------------------------REKKAEPTEFIQL 52 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEEc-h-hHHHHHHH---hh-------------------------hhhcCCchhheee
Confidence 36899999997 88999999999983 2 32222111 00 0011236677888
Q ss_pred cceEEEecCCCC-------------ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 187 KVASIRESKSDD-------------KKFSIYTGTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 187 ~~~si~~~~~d~-------------~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
.+.+|......+ ..|..+..+.++.|..+++.||+-||+||=.|-.
T Consensus 53 dGyTvDy~~~~~~~~~~~~~~~gg~~ff~avkegd~~~fa~~de~~r~lwvqa~yratg 111 (117)
T cd01234 53 DGYTVDYMPESDPDPNSELSLQGGRHFFNAVKEGDELKFATDDENERHLWVQAMYRATG 111 (117)
T ss_pred cceEEeccCCCCCCcccccccccchhhhheeccCcEEEEeccchHHHHHHHHHHHHHcC
Confidence 888877554322 2345566678899999999999999999976643
No 42
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.62 E-value=4.4e-07 Score=84.02 Aligned_cols=94 Identities=21% Similarity=0.232 Sum_probs=74.9
Q ss_pred eeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 108 GISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 108 ~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
+.+|-|+|-. .|+-++|||.|-+.+|-|-+.-.. ...-+..+.|.|.
T Consensus 5 i~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~~~-------------------------------~~~~~~~~~i~L~ 51 (104)
T cd01218 5 VGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIVIS-------------------------------KKKYNKQHILPLE 51 (104)
T ss_pred EecCcEEEee--cCCCceEEEEEecCEEEEEEeecC-------------------------------CceeeEeeEEEcc
Confidence 5689999988 678999999999999999653110 0112245889998
Q ss_pred ceEEEecCCC---CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 188 VASIRESKSD---DKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 188 ~~si~~~~~d---~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
...|....++ .+.|.|.++.|+|.+.|+|.+|+..||++|+.|++..
T Consensus 52 ~~~v~~~~d~~~~~n~f~I~~~~kSf~v~A~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 52 GVQVESIEDDGIERNGWIIKTPTKSFAVYAATETEKREWMLHINKCVTDL 101 (104)
T ss_pred ceEEEecCCcccccceEEEecCCeEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 8877644432 5899999999999999999999999999999999864
No 43
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=98.42 E-value=1.5e-06 Score=82.33 Aligned_cols=103 Identities=21% Similarity=0.321 Sum_probs=61.1
Q ss_pred eEEEEEeecC----------CCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCC
Q 003654 109 ISGILFKWVN----------YGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQR 178 (805)
Q Consensus 109 ~~G~L~K~~n----------~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 178 (805)
++|||+.+.. ..+.|+.-|.||++++|+.||+........ . .........
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~-~-------------------~~~~~~~~~ 61 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASST-P-------------------PDIQSVENA 61 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT--B-------------------S---SS--E
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCC-c-------------------ccccccccC
Confidence 5799987521 245699999999999999999843200000 0 000001223
Q ss_pred ccceEEEccceEEEecCC---CCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 179 IPVGEIHLKVASIRESKS---DDKKFSIYTG-TKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 179 ~p~G~I~L~~~si~~~~~---d~~~F~I~t~-~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
+|.+.|.|..|......+ .++.|.+.+. +..|.|+|.|.+||+.||++|..+.
T Consensus 62 ~p~~~i~L~~a~a~~a~dY~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 62 KPDSSISLHHALAEIASDYTKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp -----EE-TT-EEEEETTBTTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred cceeEEEecceEEEeCcccccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence 467889998877654322 4778999986 5899999999999999999998774
No 44
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.33 E-value=6.5e-06 Score=77.19 Aligned_cols=99 Identities=21% Similarity=0.279 Sum_probs=66.2
Q ss_pred CceeEEEEEee--cCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceE
Q 003654 106 QHGISGILFKW--VNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGE 183 (805)
Q Consensus 106 ~~~~~G~L~K~--~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~ 183 (805)
|..++|||.-- ++..|||+++|.||.+..|+.|....+..-... ..+.-.
T Consensus 1 gt~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~p~----------------------------~~~~~v 52 (122)
T cd01243 1 GTAYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQPS----------------------------VVISQV 52 (122)
T ss_pred CccceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCCcc----------------------------CceeEE
Confidence 35789999543 455689999999999999999998664211000 012223
Q ss_pred EEccc-----eE------EEecCCC-CccEEEEe-------CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 184 IHLKV-----AS------IRESKSD-DKKFSIYT-------GTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 184 I~L~~-----~s------i~~~~~d-~~~F~I~t-------~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
|+|+. .+ |...+.| ++-|.|.+ +..+++|-|+|..|+++||.||.....
T Consensus 53 LdlrD~~fsV~~VtasDvi~a~~kDiP~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l~~ 120 (122)
T cd01243 53 LDMRDPEFSVSSVLESDVIHASKKDIPCIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSELHK 120 (122)
T ss_pred EEcCCCCEEEEEecHHHccccCcccCCeEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHHHh
Confidence 34421 11 1222233 67788765 348899999999999999999987654
No 45
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.25 E-value=4.3e-07 Score=102.75 Aligned_cols=113 Identities=19% Similarity=0.150 Sum_probs=79.1
Q ss_pred ccCCCCCCCCcccCCCccCCCCCCCCCCCCCCCCCCCCCCCCCcCCCcccccccccccccccCCCCCCCCCCcC------
Q 003654 31 LSMPSSKTTTPYRSLSASTSCNRSRGSPPQPFSSSSSPSNNATAENGRRSMRRSATLESLCGLSSFRESQMLFA------ 104 (805)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssp~~~~s~pa------ 104 (805)
..+++.+.+....+++.++++.++.++..+..+-...++..++++...++..|..++.+..-.+-|......+.
T Consensus 216 s~vhig~~~ngg~s~~~ysss~pstpsisq~d~r~~~~~ta~tpTPv~k~s~R~SnlFts~Kgs~~dkekk~~e~~adti 295 (749)
T KOG0705|consen 216 STVHAGQSRNGGGSLSDYSSSIPSTPSTSQEDLRFEVAPTANTPTPVCKQSKRWSNLFTSRKGSDPDKEKKALENHADTI 295 (749)
T ss_pred hhhhhhhcccCCcchhhhhccCCCCcchhhhhhccccccccCCCchhhHHHHHHHhhhhcccCCCccccccchhhhhhhh
Confidence 34566677778888888888888887777765555566667777777777777777765544432322111111
Q ss_pred ----CCceeEEEEEeecC-CC-CCceeeEEEE-eCCeEEEEeecCC
Q 003654 105 ----DQHGISGILFKWVN-YG-RGWRPRWFVL-KEGVLSYYKIHGS 143 (805)
Q Consensus 105 ----~~~~~~G~L~K~~n-~~-kgWr~RWFVL-~~g~LsYYk~~~~ 143 (805)
+-++++|.|+|+.. .. |.|++.|..| .+|+|.||-+-++
T Consensus 296 gsGRAIPIKQg~LlKrSgk~L~keWKKKYVtlcsnG~LtYh~sL~d 341 (749)
T KOG0705|consen 296 GSGRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCSNGVLTYHPSLGD 341 (749)
T ss_pred cCCcccchhhhhHHHhcchHHHHHHhhhheeeccCcceeecccHHH
Confidence 23789999999975 33 8999999999 7899999976554
No 46
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.24 E-value=1e-05 Score=75.94 Aligned_cols=104 Identities=18% Similarity=0.275 Sum_probs=76.0
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
-+.+|-|.|-+...+.++.|+|.|-|++|-|.|.... + .++.|.. +..-+-++.|.|
T Consensus 4 lI~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~-~----------~~~~g~~------------~~~y~~k~~~~l 60 (112)
T cd01261 4 FIMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHG-Q----------PRLPGAS------------SAEYRLKEKFFM 60 (112)
T ss_pred ccccCcEEEEecccCCcceEEEEEecCeEEEEEeccC-c----------ccccccc------------cceEEEEEEEee
Confidence 3578999998865577999999999999999996442 0 0111111 112234678888
Q ss_pred cceEEEecCC-C--CccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 187 KVASIRESKS-D--DKKFSIYTG-TKRVHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 187 ~~~si~~~~~-d--~~~F~I~t~-~kt~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
....|...++ + .+.|.|.+. .+.|.|+|.|++++..||+||..++.+
T Consensus 61 ~~~~V~d~~d~~~~knaF~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~~ 111 (112)
T cd01261 61 RKVDINDKPDSSEYKNAFEIILKDGNSVIFSAKNAEEKNNWMAALISVQTK 111 (112)
T ss_pred eeeEEEEcCCCcccCceEEEEcCCCCEEEEEECCHHHHHHHHHHHHHHhcC
Confidence 8777653322 2 588999985 688999999999999999999998753
No 47
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.24 E-value=9.1e-06 Score=75.18 Aligned_cols=92 Identities=18% Similarity=0.324 Sum_probs=63.7
Q ss_pred eEEEEEeec--CC--CCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 109 ISGILFKWV--NY--GRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 109 ~~G~L~K~~--n~--~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
++|||.--. +. .+||+++|.||.+..|..|....+..- ..|.-.+
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~~-------------------------------~~p~~vl 50 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKEN-------------------------------STPSMIL 50 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCccccC-------------------------------CCcEEEE
Confidence 689996543 33 369999999999999999998665210 0122333
Q ss_pred Eccc---------e-EEEecCCC-CccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 185 HLKV---------A-SIRESKSD-DKKFSIYTGT--KRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 185 ~L~~---------~-si~~~~~d-~~~F~I~t~~--kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
+|.. + .|.....| ++-|.|..+. ++++|-|++..|++.||.||..-+
T Consensus 51 dl~~~fhv~~V~asDVi~a~~kDiP~IF~I~~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 51 DIDKLFHVRPVTQGDVYRADAKEIPKIFQILYANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred EccceeeeecccHHHeeecCcccCCeEEEEEeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 3321 1 12223334 7888887754 999999999999999999997643
No 48
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.23 E-value=5.2e-06 Score=76.43 Aligned_cols=90 Identities=24% Similarity=0.396 Sum_probs=61.4
Q ss_pred eEEEEEeecCC--CCCceeeEEEEeC--CeEEEE----eecCCcccccccccccCceeecchhhhhcccCCCCCCCCCcc
Q 003654 109 ISGILFKWVNY--GRGWRPRWFVLKE--GVLSYY----KIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIP 180 (805)
Q Consensus 109 ~~G~L~K~~n~--~kgWr~RWFVL~~--g~LsYY----k~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p 180 (805)
++|||+.+... +-.|-+.|+.++. +.+.+- +++.+..-.+ .-
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v------------------------------~~ 50 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAV------------------------------AQ 50 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCccc------------------------------cc
Confidence 46999999753 3359988888754 354332 2211100000 00
Q ss_pred ceEEEccceEEEecCCCCccE--EEEeCCe--EEEEEcCCHHHHHHHHHHHH
Q 003654 181 VGEIHLKVASIRESKSDDKKF--SIYTGTK--RVHLRAETREDRVKWMEALQ 228 (805)
Q Consensus 181 ~G~I~L~~~si~~~~~d~~~F--~I~t~~k--t~~L~A~s~~dr~~Wi~AL~ 228 (805)
--.|.|..|+++..+..++|| .|.+.++ ++.|+|+|+.++..||+|+.
T Consensus 51 ~e~~~l~sc~~r~~~~~dRRFCFei~~~~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 51 DETLTLKSCSRRKTESIDKRFCFDVEVEEKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred ceEEeeeeccccccCCccceeeEeeeecCCCCeEEEEecCHHHHHHHHHhhc
Confidence 145788899999888777665 5877776 89999999999999999985
No 49
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=98.16 E-value=4.5e-06 Score=96.17 Aligned_cols=97 Identities=20% Similarity=0.381 Sum_probs=82.7
Q ss_pred CceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEE
Q 003654 106 QHGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIH 185 (805)
Q Consensus 106 ~~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~ 185 (805)
.-.++||+.|-+...|.|++||||+++|..+||+.++++- .+|.|.|+
T Consensus 248 ~~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~--------------------------------~~p~s~~d 295 (936)
T KOG0248|consen 248 TMEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNRD--------------------------------EEPASKID 295 (936)
T ss_pred hhhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCcc--------------------------------ccccCccc
Confidence 3578899999999999999999999999999999988622 24667777
Q ss_pred ccceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 186 LKVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 186 L~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
+..-.+.+..+....|..++.++++.|-++|.---..|+.-|++++...
T Consensus 296 ~~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~~lt~dw~~iL~~~iKv~ 344 (936)
T KOG0248|consen 296 IRSVTKLEQQGAAYAFQLITSTDKMNFMTESERTTHDWVTILSAAIKAT 344 (936)
T ss_pred ccccceeeccchhHHhhhhhhceeEEEeccChhhhhhhHHHHHHHHHHH
Confidence 7766666667778889999999999999999999999999999988653
No 50
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.00 E-value=2.4e-06 Score=103.56 Aligned_cols=95 Identities=26% Similarity=0.385 Sum_probs=78.4
Q ss_pred ceeEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEE
Q 003654 107 HGISGILFKWVNY-GRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIH 185 (805)
Q Consensus 107 ~~~~G~L~K~~n~-~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~ 185 (805)
..+.|+|+|++.. .+.|.+|||-.+++.|.|+..-.+. .....++
T Consensus 274 ~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~~----------------------------------~~~~~~d 319 (785)
T KOG0521|consen 274 YRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGADA----------------------------------ENVLIED 319 (785)
T ss_pred hhhhhhhhhhcccchhhHHhhhhhhhccccccccccccc----------------------------------ccccccc
Confidence 6678999998754 7889999999999999998864420 0147778
Q ss_pred ccceEEEecCC---CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003654 186 LKVASIRESKS---DDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMFP 235 (805)
Q Consensus 186 L~~~si~~~~~---d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~~ 235 (805)
|..|+|..... ..++|.|++++|+|+|+|+|+.++++||.+|+..+...-
T Consensus 320 L~~csvk~~~~~~drr~CF~iiS~tks~~lQAes~~d~~~Wi~~i~nsi~s~l 372 (785)
T KOG0521|consen 320 LRTCSVKPDAEQRDRRFCFEIISPTKSYLLQAESEKDCQDWISALQNSILSAL 372 (785)
T ss_pred chhccccCCcccccceeeEEEecCCcceEEecCchhHHHHHHHHHHHHHHHHH
Confidence 88899876555 356788999999999999999999999999999997643
No 51
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.91 E-value=2.8e-05 Score=72.17 Aligned_cols=93 Identities=20% Similarity=0.247 Sum_probs=60.9
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc-
Q 003654 109 ISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK- 187 (805)
Q Consensus 109 ~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~- 187 (805)
++|+||-+..-.|.|++|||+|+..-|+|+-...- + + + +++- -...+.
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgks-k-~--s---rdL~------------------------cl~~f~~ 50 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKT-K-N--T---RDLA------------------------CLNLLHG 50 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCCc-C-C--H---HHHH------------------------HHHhccc
Confidence 67999999888899999999999988988765331 1 0 0 1100 011111
Q ss_pred --ceEEE-----ecCCCCccEEEEeCC-------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 188 --VASIR-----ESKSDDKKFSIYTGT-------KRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 188 --~~si~-----~~~~d~~~F~I~t~~-------kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
+.... .....+.+|.|..+. -.-.|||++++.+..||.||+.++-
T Consensus 51 ~nvY~~~~~kKk~kAPTd~~F~~K~~~~q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~Ky 109 (114)
T cd01259 51 HNVYTGLGWRKKYKSPTDYCFGFKAVGDQSKGSQSIKYLCAEDLPTLDRWLTAIRIAKY 109 (114)
T ss_pred CcEEEEechhhccCCCCCceEEEeccccCcccchhheeeccCCHHHHHHHHHHHHHHhh
Confidence 11111 122346778875432 2357899999999999999999874
No 52
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.86 E-value=9e-05 Score=69.12 Aligned_cols=88 Identities=17% Similarity=0.278 Sum_probs=65.7
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccc
Q 003654 109 ISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKV 188 (805)
Q Consensus 109 ~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ 188 (805)
++|||.-.++.-+.|||+||+|+...|++|++.... ++--+|.|+.
T Consensus 2 kEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~~s----------------------------------kyyKeIPLsE 47 (117)
T cd01239 2 KEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEESGS----------------------------------RYYKEIPLAE 47 (117)
T ss_pred ccceEEEEecCccceeeeEEEecCCeEEEEEcCCCC----------------------------------eeeEEeehHH
Confidence 689999999999999999999999999999986542 2334555542
Q ss_pred e-EEEe-------cCCCCccEEEEeCCeEEEEEcC--------------------CHHHHHHHHHHHHHH
Q 003654 189 A-SIRE-------SKSDDKKFSIYTGTKRVHLRAE--------------------TREDRVKWMEALQAV 230 (805)
Q Consensus 189 ~-si~~-------~~~d~~~F~I~t~~kt~~L~A~--------------------s~~dr~~Wi~AL~~a 230 (805)
- +|.. ....+++|.|.|.+.+|+.-++ ..+..+.|-.||+.|
T Consensus 48 Il~V~~~~~~~~~~~~~~hcFEi~T~~~vY~VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 48 ILSVSSNNGDSVLAKHPPHCFEIRTTTNVYFVGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred heEEeccCCCcCCCCCCCcEEEEEecCEEEEecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 1 2221 2346889999999999998653 345567888888764
No 53
>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=97.83 E-value=2e-05 Score=93.83 Aligned_cols=98 Identities=24% Similarity=0.501 Sum_probs=74.9
Q ss_pred CCceeEEEEEeec--CCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccce
Q 003654 105 DQHGISGILFKWV--NYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVG 182 (805)
Q Consensus 105 ~~~~~~G~L~K~~--n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G 182 (805)
..+...|+|+-.- ..+..|.+||++|.+|++.|+|.+.|+| +..|.|
T Consensus 988 idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEk-------------------------------rK~Pig 1036 (1116)
T KOG3640|consen 988 IDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEK-------------------------------RKVPIG 1036 (1116)
T ss_pred cceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhc-------------------------------ccCcce
Confidence 3478899999873 2334599999999999999999988855 234889
Q ss_pred EEEccceE---EEecCC----CCccEEEEe-------------CCe-EEEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 183 EIHLKVAS---IRESKS----DDKKFSIYT-------------GTK-RVHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 183 ~I~L~~~s---i~~~~~----d~~~F~I~t-------------~~k-t~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
.|+|..|+ |.+... ..+.|.|.+ ..| ...|.|+|.++++.|+.+|..+-..
T Consensus 1037 ~IDLt~CTsq~ie~a~rdicar~ntFhie~~rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~ 1108 (1116)
T KOG3640|consen 1037 QIDLTKCTSQSIEEARRDICARPNTFHIEVWRPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQ 1108 (1116)
T ss_pred eeehhhhhccccccchhhhccCCceeEEEeecccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHH
Confidence 99999886 333332 367788873 113 6779999999999999999887543
No 54
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.79 E-value=9.6e-05 Score=66.20 Aligned_cols=86 Identities=19% Similarity=0.251 Sum_probs=66.5
Q ss_pred eeEEEEEeecCCCCCceeeEEEEeCC-eEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 108 GISGILFKWVNYGRGWRPRWFVLKEG-VLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 108 ~~~G~L~K~~n~~kgWr~RWFVL~~g-~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
.+.|.+.|+.+. -+|+|=|+|.++ .|.|+..... ..+|+|.+
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~~~-----------------------------------~~KgeIp~ 44 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPVKK-----------------------------------VVKGEIPW 44 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEecCceEEEEcCCcC-----------------------------------eEEeEecc
Confidence 467999999886 479999999664 7777765321 24699999
Q ss_pred cceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 187 KVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 187 ~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
+...+.......+.|.|.|++|+|+|. +.....++|+++|..+.
T Consensus 45 s~~~l~v~~~~~~~F~I~Tp~rty~le-D~~~~a~~W~~~I~~~~ 88 (89)
T cd01262 45 SDVELRVEVKNSSHFFVHTPNKVYSFE-DPKGRASQWKKAIEDLQ 88 (89)
T ss_pred cccceEEEEecCccEEEECCCceEEEE-CCCCCHHHHHHHHHHHh
Confidence 884454445556899999999999995 55688899999998764
No 55
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.68 E-value=5.9e-05 Score=87.85 Aligned_cols=97 Identities=21% Similarity=0.319 Sum_probs=73.8
Q ss_pred cCCCceeEEEEEeecC-----CC-CCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCC
Q 003654 103 FADQHGISGILFKWVN-----YG-RGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSR 176 (805)
Q Consensus 103 pa~~~~~~G~L~K~~n-----~~-kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 176 (805)
|..++.++|.|+++.. .+ +.+|+|||-|.+..|+|.|+.+.
T Consensus 560 p~~p~v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~--------------------------------- 606 (800)
T KOG2059|consen 560 PQEPVVLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPGK--------------------------------- 606 (800)
T ss_pred CCCCceecccceEeccccccchhhhhhhheEEEeccceeEEecCCcc---------------------------------
Confidence 4456666666666543 22 55799999999999999999774
Q ss_pred CCccceEEEccceE----EEecC-CCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 177 QRIPVGEIHLKVAS----IRESK-SDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 177 ~~~p~G~I~L~~~s----i~~~~-~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
+|.+.|.|+.-. +.+.. ...+.|.|+..+|+++|+|.+-.|...|++||..+..+-
T Consensus 607 --q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~drtly~Q~~n~vEandWldaL~kvs~~N 667 (800)
T KOG2059|consen 607 --QPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTDRTLYVQAKNCVEANDWLDALRKVSCCN 667 (800)
T ss_pred --CcccceeHHHHHHHHHhhhhccCCCceEEEEecCcceeEecCCchHHHHHHHHHHHHhccC
Confidence 567888887432 11111 236789999999999999999999999999999887653
No 56
>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]
Probab=97.59 E-value=2.8e-05 Score=88.24 Aligned_cols=97 Identities=23% Similarity=0.341 Sum_probs=70.4
Q ss_pred ceeEEEEEee-cC--CCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceE
Q 003654 107 HGISGILFKW-VN--YGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGE 183 (805)
Q Consensus 107 ~~~~G~L~K~-~n--~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~ 183 (805)
+.++|-|.-+ |. ..|+|+.|||.|.+-.|.|.|.+..+.... -.
T Consensus 735 p~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~~---------------------------------~~ 781 (851)
T KOG3723|consen 735 PLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSDD---------------------------------CP 781 (851)
T ss_pred chhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCCC---------------------------------CC
Confidence 5788888644 32 579999999999999999988766522110 22
Q ss_pred EEccc-eEEE------ecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003654 184 IHLKV-ASIR------ESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMFPR 236 (805)
Q Consensus 184 I~L~~-~si~------~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~~~ 236 (805)
|+|.. -+|+ ..++=++.|.|||..+||.|+|.+++..++|++.|+-|.+-..+
T Consensus 782 IDl~~IRSVk~v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~~ 841 (851)
T KOG3723|consen 782 IDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAKE 841 (851)
T ss_pred ccHHHhhhHHHHHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHHH
Confidence 33321 0111 11223678999999999999999999999999999999876543
No 57
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.53 E-value=0.00021 Score=82.82 Aligned_cols=97 Identities=20% Similarity=0.313 Sum_probs=63.7
Q ss_pred CceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEE
Q 003654 106 QHGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIH 185 (805)
Q Consensus 106 ~~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~ 185 (805)
.....|||+|.+...+ |++|||.|.++.|+......+++.. ...++.+...
T Consensus 376 Dv~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~~~~~~~~~----------------------------~~~~~~~l~~ 426 (478)
T PTZ00267 376 DVTHGGYLYKYSSDMR-WKKRYFYIGNGQLRISLSENPENDG----------------------------VAPKSVNLET 426 (478)
T ss_pred CcccceEEeccCCCcc-hhhheEEecCCceEEEeccccccCC----------------------------CCCccccHHH
Confidence 3678899999998886 9999999988877766543331111 0011112212
Q ss_pred ccceE-EEe--cCCCCccEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 186 LKVAS-IRE--SKSDDKKFSIYT-GTKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 186 L~~~s-i~~--~~~d~~~F~I~t-~~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
+..+. +.. ....++.|.|.+ ..+.+.+.|+|.++|.+||.+||.+.
T Consensus 427 ~~~v~pv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 427 VNDVFPVPEVYSQKHPNQLVLWFNNGQKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred hcccccccHHhcCCCCceEEEEecCCcEEEEecCChHHHHHHHHHHHHHh
Confidence 22222 211 223477788865 45777788899999999999999885
No 58
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.43 E-value=0.00064 Score=80.70 Aligned_cols=96 Identities=20% Similarity=0.357 Sum_probs=64.9
Q ss_pred CceeEEEEEeecC--CCCC-ceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCcc--
Q 003654 106 QHGISGILFKWVN--YGRG-WRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIP-- 180 (805)
Q Consensus 106 ~~~~~G~L~K~~n--~~kg-Wr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p-- 180 (805)
.+.++||||..+. .|.. -++|||||++..|.|||....++ ++ |
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~-~~-------------------------------pir 50 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDN-QV-------------------------------PIK 50 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccc-cc-------------------------------cce
Confidence 4679999999874 3333 69999999999999999865433 11 1
Q ss_pred ceEEEccceEEEecCC---CCccEEEEe------CCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 181 VGEIHLKVASIRESKS---DDKKFSIYT------GTKRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 181 ~G~I~L~~~si~~~~~---d~~~F~I~t------~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
.|.|+-. +.|....- ..+.|+|.+ ..+.+.|.|.+.+|..+||+||+.|++..
T Consensus 51 s~~id~~-~rVed~Gr~~~~g~~~yvl~~Yn~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 51 TLLIDGN-CRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred eeccCCC-ceEeecCceEEcCceEEEEEEecCCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 1333221 12221111 123344433 45889999999999999999999999964
No 59
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.41 E-value=0.0013 Score=62.90 Aligned_cols=92 Identities=20% Similarity=0.330 Sum_probs=60.2
Q ss_pred EEEEeecCCC-----CCceeeEEEEeC--CeEEEEeecCC-cccccccccccCceeecchhhhhcccCCCCCCCCCccce
Q 003654 111 GILFKWVNYG-----RGWRPRWFVLKE--GVLSYYKIHGS-HKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVG 182 (805)
Q Consensus 111 G~L~K~~n~~-----kgWr~RWFVL~~--g~LsYYk~~~~-~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G 182 (805)
.||+|++..+ ....+|||-|+. .+|+|+..... ++... .-.+
T Consensus 13 ~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~------------------------------~~~~ 62 (123)
T PF12814_consen 13 EWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSE------------------------------SKAK 62 (123)
T ss_pred cEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCcccccc------------------------------cccc
Confidence 7999999876 579999999954 78888775321 11000 0012
Q ss_pred EEEccc-eEEEec--------CC-CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 183 EIHLKV-ASIRES--------KS-DDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 183 ~I~L~~-~si~~~--------~~-d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
.|.|.. ..|... .. -.+.|.|.++.|++.|.|.|.++...|++||+...+
T Consensus 63 ~i~I~~v~~V~~~~~~~~~~~~~~~~~si~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~~ 122 (123)
T PF12814_consen 63 SIRIESVTEVKDGNPSPPGLKKPDHNKSIIIVTPDRSLDLTAPSRERHEIWFNALRYLLQ 122 (123)
T ss_pred ceEEeeeEEecCCCCCCccccccccceEEEEEcCCeEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 233321 112111 00 134567889999999999999999999999987653
No 60
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.31 E-value=0.003 Score=57.97 Aligned_cols=88 Identities=20% Similarity=0.202 Sum_probs=67.2
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
-.++|.|.-++. =+.|+.-|-+..|-|.|..++ +. .-+..|.+
T Consensus 4 Llleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~~-~y--------------------------------~~K~~i~~ 46 (97)
T cd01222 4 LLLEGRFREHGG----GKPRLLFLFQTMLLIAKPRGD-KY--------------------------------QFKAYIPC 46 (97)
T ss_pred eeeeceEEeecC----CCceEEEEecccEEEEEecCC-ee--------------------------------EEEEEEEe
Confidence 357788874443 346999999999999997653 21 23577777
Q ss_pred cceEEEecCC-CCccEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 187 KVASIRESKS-DDKKFSIYTGT---KRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 187 ~~~si~~~~~-d~~~F~I~t~~---kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
..-.|.++.. |+++|.|.... +.|.|+|.|.++++.||++|+.++
T Consensus 47 ~~l~i~e~~~~d~~~F~v~~~~~p~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 47 KNLMLVEHLPGEPLCFRVIPFDDPKGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred cceEEecCCCCCCcEEEEEecCCCceEEEEEecCHHHHHHHHHHHHHHh
Confidence 7666665543 68999996654 799999999999999999999875
No 61
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.28 E-value=0.004 Score=58.17 Aligned_cols=90 Identities=16% Similarity=0.311 Sum_probs=67.4
Q ss_pred eeEEEEEeecCCCCCc-eeeEEEEeCCeEEEEee---cCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceE
Q 003654 108 GISGILFKWVNYGRGW-RPRWFVLKEGVLSYYKI---HGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGE 183 (805)
Q Consensus 108 ~~~G~L~K~~n~~kgW-r~RWFVL~~g~LsYYk~---~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~ 183 (805)
+++|-|.+.+. .+|| +.|.|-|-|++|.|.|. .++ .-.-+|.
T Consensus 3 i~~Gel~~~s~-~~g~~q~R~~FLFD~~LI~CKkd~~r~~---------------------------------~~~yKgr 48 (109)
T cd01224 3 FLQGEATRQKQ-NKGWNSSRVLFLFDHQMVLCKKDLIRRD---------------------------------HLYYKGR 48 (109)
T ss_pred eEeeeEEEEec-ccCCcccEEEEEecceEEEEecccccCC---------------------------------cEEEEEE
Confidence 56788887773 3455 67999999999999994 221 1124699
Q ss_pred EEccceEEEecCCC---------CccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 184 IHLKVASIRESKSD---------DKKFSIYTGT--KRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 184 I~L~~~si~~~~~d---------~~~F~I~t~~--kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
|.|..+.|....+. .+.|.|+..+ +.|.|+|.|.++.+.||+||..-+
T Consensus 49 i~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~~~~~~f~~Kt~e~K~~Wm~a~~~er 107 (109)
T cd01224 49 IDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSESTDEWYLFSFKSAERKHRWLSAFALER 107 (109)
T ss_pred EEcccEEEEECCCCccccCCceeEEEEEEEEcCCCeEEEEEECCHHHHHHHHHHHHHhh
Confidence 99998888744332 3467777654 789999999999999999997644
No 62
>PLN02866 phospholipase D
Probab=97.18 E-value=0.0022 Score=79.06 Aligned_cols=111 Identities=19% Similarity=0.275 Sum_probs=73.3
Q ss_pred CCceeEEEEEeec-----C---------------CCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhh
Q 003654 105 DQHGISGILFKWV-----N---------------YGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSM 164 (805)
Q Consensus 105 ~~~~~~G~L~K~~-----n---------------~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~ 164 (805)
.+..++||++|+. . ...+|++|||||+++.|.|.+.+-+.++. .+-++...
T Consensus 180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~-------~v~lfD~~-- 250 (1068)
T PLN02866 180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPL-------DIIVFDVL-- 250 (1068)
T ss_pred CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCcee-------EEEEEecc--
Confidence 3478999999992 1 01469999999999999999876654432 11111110
Q ss_pred hhcccCCCCCCCCCccceEEEccceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 165 RRMSRNGNSQSRQRIPVGEIHLKVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 165 ~~~~~~~~~~~~~~~p~G~I~L~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
. .-+.+--|.|.|+.- +.+...-...|.|.+++|++.|+|.|......|+.+|+.+....
T Consensus 251 -------~--~~~~~~~~~~~~~~~-~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~ 310 (1068)
T PLN02866 251 -------P--ASNGNGEGQISLAKE-IKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRP 310 (1068)
T ss_pred -------c--ccccCCCcceeeccc-ccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhcc
Confidence 0 001111244444322 11112235689999999999999999999999999999997544
No 63
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.09 E-value=0.0016 Score=60.83 Aligned_cols=99 Identities=23% Similarity=0.297 Sum_probs=61.3
Q ss_pred EEEEeecC----CCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 111 GILFKWVN----YGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 111 G~L~K~~n----~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
|||..+.. ..+.||+|+++|+++-|..|++..-.+-.-+.+. ....++-. . .-.++.
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~-~~y~L~~~-a-----------------trvv~~ 63 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPL-YVYKLYDV-A-----------------TRLVKN 63 (108)
T ss_pred eecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChh-hhChhHHh-h-----------------hheecc
Confidence 89988854 3488999999999999999998653221111100 00000000 0 000111
Q ss_pred cceEEEecCCCCccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHH
Q 003654 187 KVASIRESKSDDKKFSIYTGT--KRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 187 ~~~si~~~~~d~~~F~I~t~~--kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
... -+.....+.+|.|.+++ .+..|+.++..|+..|..||+.
T Consensus 64 ~~~-~~~~~~~~~~F~irtg~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 64 SST-RRLNDQRDNCFLIRTGTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred CCc-cCcCCCCceEEEEEcCCceeeEEEEecCHHHHHHHHHHHhc
Confidence 000 00012456789999997 5889999999999999999974
No 64
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.00 E-value=0.0033 Score=60.16 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=52.6
Q ss_pred ceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccceEEEe--------c
Q 003654 123 WRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKVASIRE--------S 194 (805)
Q Consensus 123 Wr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~~si~~--------~ 194 (805)
-++||+.|-+++|-|-|....++..+-+- -+++.|.+....... .
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V~dy---------------------------~~r~~l~V~~~e~~~~~~~~~~~~ 79 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVVFDY---------------------------APRSFLRVEKIEPDNQKIPLGSNL 79 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEEEee---------------------------ccccceEEeecccccccccccccc
Confidence 46889999999999999776655543211 134444443322110 1
Q ss_pred CCCCccEEEE------eCCeEEEEEcCCHHHHHHHHHHHH
Q 003654 195 KSDDKKFSIY------TGTKRVHLRAETREDRVKWMEALQ 228 (805)
Q Consensus 195 ~~d~~~F~I~------t~~kt~~L~A~s~~dr~~Wi~AL~ 228 (805)
...++.|.|. .-++.+.|+|+|+.||.+||+||.
T Consensus 80 ~~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al~ 119 (125)
T cd01221 80 VGRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSALA 119 (125)
T ss_pred cCCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhcC
Confidence 1346778875 234789999999999999999984
No 65
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=96.78 E-value=0.00071 Score=80.28 Aligned_cols=99 Identities=22% Similarity=0.302 Sum_probs=79.1
Q ss_pred CCcCCCceeEEEEEeecCCCC-CceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCc
Q 003654 101 MLFADQHGISGILFKWVNYGR-GWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRI 179 (805)
Q Consensus 101 s~pa~~~~~~G~L~K~~n~~k-gWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 179 (805)
+.+.+++.++|||-|-..-+. -.++||--+.+..|.||.+..+ . -
T Consensus 81 s~~isp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k~---p-------------------------------y 126 (1186)
T KOG1117|consen 81 STPISPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPKD---P-------------------------------Y 126 (1186)
T ss_pred CCccCchhhcchhhccCcCcccccCccceecCCCCccccCCCCC---C-------------------------------C
Confidence 445566899999999876543 3899999999999999998765 1 1
Q ss_pred cceEEEccceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 180 PVGEIHLKVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 180 p~G~I~L~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
+.|.|.|...+.. ....+..|.|+++.|+|.+++++..+|..||++|+.+-..-
T Consensus 127 ~k~~i~va~is~v-~~~gd~kfevitn~r~fvfr~e~~~~r~~w~s~l~s~~~~Q 180 (1186)
T KOG1117|consen 127 SKGPIPVAAISAV-RNFGDNKFEVITNQRTFVFRQESEGERFIWVSPLQSALKEQ 180 (1186)
T ss_pred CCCceeeehhhhh-hhccCceEEEEecceEEEEecCCcccceeeechhhhcchhh
Confidence 3577777655432 23467889999999999999999999999999999986543
No 66
>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]
Probab=96.72 E-value=0.0032 Score=71.71 Aligned_cols=100 Identities=23% Similarity=0.330 Sum_probs=64.4
Q ss_pred CCceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 105 DQHGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 105 ~~~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
..+.+.|+||-+....|+||+-||||+..-|||+..... .++ |++ .+...+
T Consensus 315 ~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~ts------k~~-r~L----------------------q~l~~~ 365 (622)
T KOG3751|consen 315 SPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTS------KEP-RHL----------------------QCLADL 365 (622)
T ss_pred CCccccceeeecccccccceeEEEEEecCcceEccCCCC------CCc-hhh----------------------HHHHhc
Confidence 347899999999999999999999999988998865321 000 110 001111
Q ss_pred Ecc-ceEEE-----ecCCCCccEEEEeCC-----eE-EEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 185 HLK-VASIR-----ESKSDDKKFSIYTGT-----KR-VHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 185 ~L~-~~si~-----~~~~d~~~F~I~t~~-----kt-~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
|=. +++.. .....+.+|.|.... |- =.|||+++..|..|+.||+.+|.-
T Consensus 366 ~~snVYt~i~~rKkyksPTd~~f~~K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl~KyG 426 (622)
T KOG3751|consen 366 HSSNVYTGIGGRKKYKSPTDYGFCIKPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRLLKYG 426 (622)
T ss_pred ccCceEEeecchhccCCCCCceEEeeeccccCcccceeeeecccchhHHHHHHHHHHHHHH
Confidence 110 11111 112246778876532 33 358999999999999999999853
No 67
>PF15406 PH_6: Pleckstrin homology domain
Probab=96.70 E-value=0.0037 Score=57.87 Aligned_cols=49 Identities=29% Similarity=0.441 Sum_probs=40.5
Q ss_pred cceEEEccceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003654 180 PVGEIHLKVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 180 p~G~I~L~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
|.|.|+|..++- +..+....|.+...+....|+|.|..||+.||.+|.+
T Consensus 63 P~GiinLadase-~~~~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk~ 111 (112)
T PF15406_consen 63 PSGIINLADASE-PEKDGSNKFHFKIKGHKHTFEAASAAERDNWVAQLKA 111 (112)
T ss_pred CcceEehhhccc-cccCCCceEEEEeCCceeeeecCCHHHhccHHHHhhc
Confidence 789999976652 1345577888888999999999999999999999864
No 68
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=96.40 E-value=0.0034 Score=58.08 Aligned_cols=96 Identities=17% Similarity=0.253 Sum_probs=62.2
Q ss_pred ceeEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEE
Q 003654 107 HGISGILFKWVNYG-RGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIH 185 (805)
Q Consensus 107 ~~~~G~L~K~~n~~-kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~ 185 (805)
.++.||+.|.|+.+ ..||+|||-|-.+-|-+|...+..+.+ +|-- -+
T Consensus 3 cIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~~~e----------Li~M----------------------~~ 50 (116)
T cd01240 3 CIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEANKPE----------LITM----------------------DQ 50 (116)
T ss_pred eEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccccCCc----------EEEe----------------------eh
Confidence 57899999999865 569999999999999997543321111 1110 01
Q ss_pred cc-ce-EEEecCCCCccEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003654 186 LK-VA-SIRESKSDDKKFSI-YTGTKRVHLRAETREDRVKWMEALQAVKEMFP 235 (805)
Q Consensus 186 L~-~~-si~~~~~d~~~F~I-~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~~ 235 (805)
+. ++ .....+ +++++.| ..+++.|.|++++.-+..+|...|+.+-....
T Consensus 51 i~~V~~e~~~iK-~~~CI~ik~k~~~k~vlt~~d~i~l~qW~~elr~a~r~Sq 102 (116)
T cd01240 51 IEDVSVEFQQIK-EENCILLKIRDEKKIVLTNSDEIELKQWKKELRDAHRESQ 102 (116)
T ss_pred hhhcchhheeec-cCceEEEEEcCCceEEEecCCcHHHHHHHHHHHHHHHHHH
Confidence 11 11 011112 3444554 44678899999999999999999988755443
No 69
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=96.23 E-value=0.0011 Score=78.61 Aligned_cols=96 Identities=23% Similarity=0.402 Sum_probs=74.9
Q ss_pred CCceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 105 DQHGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 105 ~~~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
....++|||...-..-.||++=|.|..+-+|++||+++|+- |..++
T Consensus 922 ~e~qLsg~LlrkfknssgwqkLwvvft~fcl~fyKS~qD~~----------------------------------~lasl 967 (1036)
T KOG3531|consen 922 VENQLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQDSE----------------------------------PLASL 967 (1036)
T ss_pred HHhhhhHHHHHHhhccccceeeeeeecceeeEeeccccccc----------------------------------ccccc
Confidence 44789999987765566999999999999999999999722 33455
Q ss_pred EccceEEEecCC-----CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 185 HLKVASIRESKS-----DDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 185 ~L~~~si~~~~~-----d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
.|-+.++..... .+..|.+.-..-.|.++|++.=....||+.|+.+-...
T Consensus 968 PlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffraes~yt~~rw~evi~~a~~s~ 1022 (1036)
T KOG3531|consen 968 PLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFRAESYYTFERWMEVITDAPSSA 1022 (1036)
T ss_pred cccccccCCCCCCCCcchhheeeeehhhhHHHHhhhhhhhhhhHHHHhhcCCccC
Confidence 565555543322 35678888888999999999999999999999886544
No 70
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=96.06 E-value=0.0045 Score=72.29 Aligned_cols=88 Identities=6% Similarity=-0.231 Sum_probs=64.5
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
....|+|.|+-..+|.||.|||++.+|.+.||+++-+ ++.|.+.+
T Consensus 259 ~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d-----------------------------------~~s~~~~~ 303 (936)
T KOG0248|consen 259 TSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKID-----------------------------------IRSVTKLE 303 (936)
T ss_pred hHHHHHHHhHheeeccceEEEEEcCCCccccccCccc-----------------------------------ccccceee
Confidence 4667999999889999999999999999999998764 13355555
Q ss_pred cc-eEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 187 KV-ASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 187 ~~-~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
.. |++. -.....+-...+.+.++.|-++...-.+.||.+++..
T Consensus 304 ~~~~s~~-fqli~~t~~~~~~~~s~~lt~dw~~iL~~~iKv~~~~ 347 (936)
T KOG0248|consen 304 QQGAAYA-FQLITSTDKMNFMTESERTTHDWVTILSAAIKATTLR 347 (936)
T ss_pred ccchhHH-hhhhhhceeEEEeccChhhhhhhHHHHHHHHHHHhcc
Confidence 43 2321 1111223344555678889999999999999998865
No 71
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=95.82 E-value=0.011 Score=68.45 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=74.4
Q ss_pred CCceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 105 DQHGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 105 ~~~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
...+++|.|+|.......-+.||.+|-+..|-|.+-... . .| ..-.++-.+
T Consensus 270 reLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~---~-----------~~---------------~k~~~r~~~ 320 (623)
T KOG4424|consen 270 RELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKR---L-----------PG---------------SKYEVRARC 320 (623)
T ss_pred HHHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhh---c-----------cc---------------ceeccceee
Confidence 347899999999987777999999999999999875331 0 00 000123333
Q ss_pred EccceEEEecCCC--CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003654 185 HLKVASIRESKSD--DKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMFPR 236 (805)
Q Consensus 185 ~L~~~si~~~~~d--~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~~~ 236 (805)
.+....+...... .+.|.+....|.+.|.|.|.++...||++|+.+++.+..
T Consensus 321 s~~~~~v~~~~~~~~~~tF~~~G~~r~vel~a~t~~ek~eWv~~I~~~Id~~kq 374 (623)
T KOG4424|consen 321 SISHMQVQEDDNEELPHTFILTGKKRGVELQARTEQEKKEWVQAIQDAIDKHKQ 374 (623)
T ss_pred ccCcchhcccccccCCceEEEecccceEEeecCchhhHHHHHHHHHHHHHHHHH
Confidence 3333333322222 678988888999999999999999999999999988653
No 72
>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]
Probab=95.51 E-value=0.0056 Score=71.41 Aligned_cols=40 Identities=25% Similarity=0.427 Sum_probs=31.7
Q ss_pred ceeEEEEEeecC--CC-CCceeeEEEEeCCeEEEEeecCCccc
Q 003654 107 HGISGILFKWVN--YG-RGWRPRWFVLKEGVLSYYKIHGSHKI 146 (805)
Q Consensus 107 ~~~~G~L~K~~n--~~-kgWr~RWFVL~~g~LsYYk~~~~~k~ 146 (805)
.-.+|||++..- ++ ..|++-||||.+..|+.|+++...++
T Consensus 562 G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~~~~ 604 (638)
T KOG1738|consen 562 GDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRVRAA 604 (638)
T ss_pred chhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhhhch
Confidence 446699998863 33 34999999999999999999886443
No 73
>PF15404 PH_4: Pleckstrin homology domain
Probab=95.38 E-value=0.097 Score=53.51 Aligned_cols=32 Identities=22% Similarity=0.439 Sum_probs=29.2
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEee
Q 003654 109 ISGILFKWVNYGRGWRPRWFVLKEGVLSYYKI 140 (805)
Q Consensus 109 ~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~ 140 (805)
++|+||.+.+....|+++++||..|.|.-|+.
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~ 32 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQL 32 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEE
Confidence 46999999988889999999999999988887
No 74
>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]
Probab=95.17 E-value=0.042 Score=63.55 Aligned_cols=101 Identities=21% Similarity=0.367 Sum_probs=67.2
Q ss_pred CceeEEEEEeec--CCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceE
Q 003654 106 QHGISGILFKWV--NYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGE 183 (805)
Q Consensus 106 ~~~~~G~L~K~~--n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~ 183 (805)
+..++||||-+- ..++.|-+.|++....+-.+--.+.+ + + .+....+..+
T Consensus 264 p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~------q---k-------------------~g~k~g~~~~ 315 (812)
T KOG1451|consen 264 PSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPAN------Q---K-------------------TGTKMGQTAT 315 (812)
T ss_pred CcccceeeeehhhhhccchhhhheeEeecccceEEEeecc------c---C-------------------CCCcCCCcce
Confidence 357899999885 57899999999875443222222111 0 0 0111124567
Q ss_pred EEccceEEEecCCCCccE--EEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 184 IHLKVASIRESKSDDKKF--SIYTGT--KRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 184 I~L~~~si~~~~~d~~~F--~I~t~~--kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
+.|+.|+=+..++-++|| .|-+.. .++.++|-|++||..||+|+-.+.-.|
T Consensus 316 ~~lKsC~RRktdSIdKRFCFDve~~erpgviTmQALSE~drrlWmeAMDG~ep~Y 370 (812)
T KOG1451|consen 316 FKLKSCSRRKTDSIDKRFCFDVEVEERPGVITMQALSEKDRRLWMEAMDGAEPSY 370 (812)
T ss_pred EEehhhccCcccccccceeeeeeecccCCeeehHhhhhhHHHHHHHHhcCCCccc
Confidence 889998866555555655 466655 589999999999999999998774333
No 75
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.94 E-value=0.011 Score=67.75 Aligned_cols=106 Identities=25% Similarity=0.340 Sum_probs=68.4
Q ss_pred CCceeEEEEEeecC---------CC-CCceeeEEEEeCCeEEEEeecCC-cccccccccccCceeecchhhhhcccCCCC
Q 003654 105 DQHGISGILFKWVN---------YG-RGWRPRWFVLKEGVLSYYKIHGS-HKIIVNEETEKGSKVIGEVSMRRMSRNGNS 173 (805)
Q Consensus 105 ~~~~~~G~L~K~~n---------~~-kgWr~RWFVL~~g~LsYYk~~~~-~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 173 (805)
+.+-+.|+|..+.. .+ +|||.-|-||++-+||+-|++-. ++.....+. +
T Consensus 504 a~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~l-k------------------- 563 (774)
T KOG0932|consen 504 AATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESDL-K------------------- 563 (774)
T ss_pred chhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhhh-h-------------------
Confidence 34678899986642 33 56999999999999999886432 111110000 0
Q ss_pred CCCCCccceEEEccceEEEe-cCCCCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHHccc
Q 003654 174 QSRQRIPVGEIHLKVASIRE-SKSDDKKFSIYTGT-KRVHLRAETREDRVKWMEALQAVKEMFPR 236 (805)
Q Consensus 174 ~~~~~~p~G~I~L~~~si~~-~~~d~~~F~I~t~~-kt~~L~A~s~~dr~~Wi~AL~~a~~~~~~ 236 (805)
.+.+ ||=+.++-.. -...++.|.+.|.. |.|.|+|.+.++|+.||..|..+.+.|..
T Consensus 564 -----navs-vHHALAt~AtdY~KKp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA~fSa 622 (774)
T KOG0932|consen 564 -----NAVS-VHHALATPATDYSKKPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAAAFSA 622 (774)
T ss_pred -----hhhh-hhhhhcCCCcccccCCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHHhccC
Confidence 0000 1111111000 12246789999876 99999999999999999999999998864
No 76
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=94.80 E-value=0.0067 Score=70.01 Aligned_cols=92 Identities=21% Similarity=0.339 Sum_probs=65.4
Q ss_pred ceeEEEEEeec-CCCCCceeeEEEEeCC-----eEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCcc
Q 003654 107 HGISGILFKWV-NYGRGWRPRWFVLKEG-----VLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIP 180 (805)
Q Consensus 107 ~~~~G~L~K~~-n~~kgWr~RWFVL~~g-----~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p 180 (805)
-..+||||--| |..|.|++|+|||-.- .+.-|+... ..|
T Consensus 464 mkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyrekk-----------------------------------aep 508 (1218)
T KOG3543|consen 464 MKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYREKK-----------------------------------AEP 508 (1218)
T ss_pred cccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhhcc-----------------------------------cCh
Confidence 45789999887 5689999999999432 111222211 135
Q ss_pred ceEEEccceEEEecCCCC------ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 181 VGEIHLKVASIRESKSDD------KKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 181 ~G~I~L~~~si~~~~~d~------~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
.-.|.|.+..|...+..+ ..|.-+..+.++.|..+++.||.-||+|+-.|...
T Consensus 509 qel~qldgytvdytdp~pglqgg~~ffnavkegdtvifasddeqdr~lwvqamyratgq 567 (1218)
T KOG3543|consen 509 QELIQLDGYTVDYTDPSPGLQGGKHFFNAVKEGDTVIFASDDEQDRHLWVQAMYRATGQ 567 (1218)
T ss_pred HHHhhccCeeeccCCCCCccccchHHHHHhccCceEEeccCchhhhhHHHHHHHHhhCC
Confidence 678889888887654422 23555667789999999999999999999877544
No 77
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.70 E-value=0.39 Score=44.40 Aligned_cols=52 Identities=13% Similarity=0.268 Sum_probs=40.2
Q ss_pred ceEEEccceEEE---ecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 181 VGEIHLKVASIR---ESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 181 ~G~I~L~~~si~---~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
..++.|..-.|. .++.-.+.|.|.++.+++.++|+|.+++.+||..|+.|+.
T Consensus 45 ~~~~~L~~i~V~ni~D~~~~kNafki~t~~~s~i~qaes~~~K~eWl~~le~a~~ 99 (100)
T cd01226 45 ESTYSLNSVAVVNVKDRENAKKVLKLLIFPESRIYQCESARIKTEWFEELEQAKR 99 (100)
T ss_pred EEEEehHHeEEEecCCCcCcCceEEEEeCCccEEEEeCCHHHHHHHHHHHHHHhc
Confidence 356666543332 1222367899999999999999999999999999999973
No 78
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=94.37 E-value=0.093 Score=61.48 Aligned_cols=35 Identities=23% Similarity=0.485 Sum_probs=30.4
Q ss_pred CccEEEE-eCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 198 DKKFSIY-TGTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 198 ~~~F~I~-t~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
.+.|.+. +++|.+.|.|.+.++|+.||.+||.+..
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 455 AHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred CcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 6678764 4679999999999999999999998864
No 79
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.28 E-value=0.28 Score=44.69 Aligned_cols=90 Identities=20% Similarity=0.190 Sum_probs=60.8
Q ss_pred eeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 108 GISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 108 ~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
..+|+|.|-. .+.=+.|-|-|-+.+|.|-+.... . ......-+..=.|.|.
T Consensus 4 v~eg~lvel~--~~~rK~R~~FLFnDlLvc~~ik~~---~------------------------~~k~~kY~~~w~IPL~ 54 (96)
T cd01228 4 VKDSFLVELV--EGSRKLRHLFLFTDVLLCAKLKKT---S------------------------RGKHQQYDCKWYIPLA 54 (96)
T ss_pred cccceeeeeh--hCCCcceEEEeeccEEEEEEeeec---c------------------------CccccccceeEEEEhH
Confidence 3468998877 344688999999999999887421 0 0000112234567776
Q ss_pred ceEEEecCCCCccEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 188 VASIRESKSDDKKFSI-YTGTKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 188 ~~si~~~~~d~~~F~I-~t~~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
.-.+.... |.+ .+++|+|.+.|.|..|+.+||.+|+...
T Consensus 55 dl~~~~~~-----~~~~~~~~KSf~~~asS~~Er~eW~~hI~~~~ 94 (96)
T cd01228 55 DLSFPSEP-----FRIHNKNGKSYTFLLSSDYERSEWRESIQKLQ 94 (96)
T ss_pred Hheecchh-----hhccccCCceEEEEecCHHHHHHHHHHHHHHh
Confidence 55553221 444 4578999999999999999999997643
No 80
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.05 E-value=0.88 Score=43.13 Aligned_cols=99 Identities=17% Similarity=0.316 Sum_probs=63.3
Q ss_pred eeEEEEEeecCC---CCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEE
Q 003654 108 GISGILFKWVNY---GRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEI 184 (805)
Q Consensus 108 ~~~G~L~K~~n~---~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I 184 (805)
.+.|-+.=|... .+.=+.|-+-|-+..|-|.|...+.+ .. ....-.-+..|
T Consensus 6 l~Q~~f~v~~~~~~~~~K~~eR~vFLFe~~lvfsk~~~~~~-~~-------------------------~~~~Y~yK~~i 59 (114)
T cd01232 6 LLQDTFQVWDPKAGLIQKGRERRVFLFEQSIIFAKEVKKKK-QF-------------------------GNPKYIYKSKL 59 (114)
T ss_pred EEEccEEEEeCCccccCCCceeEEEEeeceEEEEEEeccCC-CC-------------------------CceeEEEecce
Confidence 445555555442 22345566668888888888754310 00 00001124666
Q ss_pred EccceEEEecC-CCCccEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 185 HLKVASIRESK-SDDKKFSIYTGT-----KRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 185 ~L~~~si~~~~-~d~~~F~I~t~~-----kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
.|..-.+.++. .|+++|.|...+ .+|.|+|.|.+.++.||..|+.+.+
T Consensus 60 kls~l~l~e~v~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 60 QVSKMGLTEHVEGDPCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred eeeeeEeEEccCCCCceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 67666666544 578999986643 6999999999999999999987653
No 81
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.02 E-value=0.22 Score=46.81 Aligned_cols=34 Identities=29% Similarity=0.574 Sum_probs=29.1
Q ss_pred CCCccEEEEeCC----eEEEEEcCCHHHHHHHHHHHHH
Q 003654 196 SDDKKFSIYTGT----KRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 196 ~d~~~F~I~t~~----kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
..++.|+|+-+. +++||.|+|.++++.|++.|+.
T Consensus 77 ~e~~~fTIiy~~~~~~k~L~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 77 LEERCFTIVYGTDLNLKSLDLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred ccccEEEEEECCCCCeeEEEEEECCHHHHHHHHHHHhh
Confidence 457889987654 6999999999999999999974
No 82
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=91.84 E-value=1 Score=42.28 Aligned_cols=80 Identities=23% Similarity=0.318 Sum_probs=57.7
Q ss_pred CCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccceEEEe---cCC
Q 003654 120 GRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKVASIRE---SKS 196 (805)
Q Consensus 120 ~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~~si~~---~~~ 196 (805)
...=..|||||-.++|........ + .+ -.-.|.+.|+.-+|.. ...
T Consensus 25 ~qe~~eRyLvLFp~~LlilS~s~r----~-------------------------sG--f~yqGkLPL~~i~v~~lEd~e~ 73 (111)
T cd01225 25 GEEKRERYLVLFPNVLLMLSASPR----M-------------------------SG--FIYQGKLPLTGIIVTRLEDTEA 73 (111)
T ss_pred ccccceeEEEEcCceEEEEEcCCC----c-------------------------cc--eEEeeeecccccEEechHhccC
Confidence 344678999999998887665221 0 00 1124889998888763 222
Q ss_pred CCccEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003654 197 DDKKFSIYTGT-KRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 197 d~~~F~I~t~~-kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
..+.|.|.... .++.+.+.+.+|.++||..|+.-
T Consensus 74 ~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~hL~~~ 108 (111)
T cd01225 74 LKNAFEISGPLIERIVVVCNNPQDAQEWVELLNAN 108 (111)
T ss_pred ccceEEEeccCcCcEEEEeCCHHHHHHHHHHHHhh
Confidence 35789998776 78888899999999999999863
No 83
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=90.20 E-value=4.2 Score=39.67 Aligned_cols=53 Identities=26% Similarity=0.437 Sum_probs=41.3
Q ss_pred ceEEEccceEEEec-CCCCccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 181 VGEIHLKVASIRES-KSDDKKFSIYTGT--KRVHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 181 ~G~I~L~~~si~~~-~~d~~~F~I~t~~--kt~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
+..|.|..-.+.++ ..|+++|.|-+.. .+|.|+|.|.+.++.||..|......
T Consensus 62 K~~ikls~lglte~v~gd~~kFeiw~~~~~~~yilqA~t~e~K~~Wv~~I~~iL~~ 117 (133)
T cd01227 62 KQSLKMTAVGITENVKGDTKKFEIWYNAREEVYILQAPTPEIKAAWVNEIRKVLTS 117 (133)
T ss_pred eeeEEeecccccccCCCCccEEEEEeCCCCcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 46677765556554 3468899997754 68999999999999999999877554
No 84
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=90.13 E-value=0.31 Score=58.97 Aligned_cols=91 Identities=24% Similarity=0.345 Sum_probs=69.4
Q ss_pred CCceeEEEEEeecCCCCCceeeEEE-EeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceE
Q 003654 105 DQHGISGILFKWVNYGRGWRPRWFV-LKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGE 183 (805)
Q Consensus 105 ~~~~~~G~L~K~~n~~kgWr~RWFV-L~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~ 183 (805)
.++..+|||--+ |+|..-|+ |.++.+--||+..+=++ |. -.-.
T Consensus 190 ~pP~raG~lelr-----g~kak~f~~vsp~~vqL~knlq~f~l-------------gi------------------git~ 233 (1186)
T KOG1117|consen 190 VPPPRAGWLELR-----GFKAKLFVAVSPERVQLYKNLQSFPL-------------GI------------------GITF 233 (1186)
T ss_pred CCCCCccchhcc-----ccccceeEEecCceeeeecccccccC-------------Cc------------------eeEE
Confidence 446778999654 45555555 58999999998765111 11 1356
Q ss_pred EEccceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 184 IHLKVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 184 I~L~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
|.+.++.+.+. |.+-|.+.|+-|.|-|.|++..+|+.|+.|+|.+++.
T Consensus 234 I~m~~~nvk~v--dr~sfdl~Tp~r~fsftaese~erq~w~ea~q~siAe 281 (1186)
T KOG1117|consen 234 IYMEVSNVKEV--DRRSFDLNTPYREFSFTAESETERQIWGEAPQPSIAE 281 (1186)
T ss_pred Eeccccccccc--ccceeccCCceeeeeeeeccchhhhhhhhccCccccc
Confidence 88888888644 4588999999999999999999999999999988764
No 85
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=89.83 E-value=0.0054 Score=67.43 Aligned_cols=78 Identities=29% Similarity=0.493 Sum_probs=62.2
Q ss_pred CceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccceE--EEecCCCCc
Q 003654 122 GWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKVAS--IRESKSDDK 199 (805)
Q Consensus 122 gWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~~s--i~~~~~d~~ 199 (805)
.|++-||||.+..|.||.....+.+ ...-|+|+|..|. ..++...+.
T Consensus 34 ~~~k~~~~~~~~~~~~~~d~~A~~~-------------------------------~~L~~~~~LR~C~~v~e~a~q~nY 82 (593)
T KOG4807|consen 34 QWKKHWFVLTDSSLKYYRDSTAEEA-------------------------------DELDGEIDLRSCTDVTEYAVQRNY 82 (593)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhc-------------------------------ccCCccccHHHHHHHHHHHHHhcc
Confidence 4999999999999999997443111 1134999999886 223345688
Q ss_pred cEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 200 KFSIYTGTKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 200 ~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
.|.|.+.+..|.|.|.+..-+..||.|+...
T Consensus 83 ~~~i~~~~~~~tL~~~~s~Ir~~~~~A~~kT 113 (593)
T KOG4807|consen 83 GFQIHTKDAVYTLSAMTSGIRRNWIEALRKT 113 (593)
T ss_pred ceeecccchhhhhHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999844
No 86
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=89.33 E-value=3.7 Score=39.07 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=59.5
Q ss_pred EEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccce
Q 003654 110 SGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKVA 189 (805)
Q Consensus 110 ~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~~ 189 (805)
-|.|.-.......=+.|+.-|-|++|-..|..++.- | .....-+-.+.|...
T Consensus 7 DGelk~k~~~~~k~k~RyiFLFDk~lI~CK~~~~~~--------------~--------------~~~Y~~Ke~~~l~~~ 58 (116)
T cd01223 7 DGEVRIKASEDQKTKLRYIFLFDKAVIVCKALGDNT--------------G--------------DMQYTYKDIHDLADY 58 (116)
T ss_pred CCceEEeEeccCCCceeEEEEecceEEEEEecCCCC--------------C--------------CccEEhHHhhhhhee
Confidence 355544443333356899889999999999765400 0 000111234444444
Q ss_pred EEEecC---CC------CccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHHc
Q 003654 190 SIRESK---SD------DKKFSIYTGT--KRVHLRAETREDRVKWMEALQAVKEMF 234 (805)
Q Consensus 190 si~~~~---~d------~~~F~I~t~~--kt~~L~A~s~~dr~~Wi~AL~~a~~~~ 234 (805)
.|.... .+ .+.|.|.... ..|.|.|.|++++..||.||..|++..
T Consensus 59 ~I~~~~~~d~~~~~~~~~~~f~L~~~~~~~~~~f~~Ktee~K~kWm~al~~a~sni 114 (116)
T cd01223 59 KIENNPSRDTEGRDTRWKYGFYLAHKQGKTGFTFYFKTEHLRKKWLKALEMAMSNI 114 (116)
T ss_pred eeEecCccCcccCCcceEEEEEEEecCCCccEEEEeCCHHHHHHHHHHHHHHHhcC
Confidence 454432 11 1345565533 679999999999999999999998753
No 87
>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]
Probab=80.74 E-value=0.31 Score=56.51 Aligned_cols=52 Identities=19% Similarity=0.327 Sum_probs=38.5
Q ss_pred cceEEEccceEEEecCCCC----ccEEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003654 180 PVGEIHLKVASIRESKSDD----KKFSIYT---GTKRVHLRAETREDRVKWMEALQAVK 231 (805)
Q Consensus 180 p~G~I~L~~~si~~~~~d~----~~F~I~t---~~kt~~L~A~s~~dr~~Wi~AL~~a~ 231 (805)
|-+.|.|++|.+.+.-.+. ..|.|.. ++..+.|||++++...+||.|-+.|-
T Consensus 400 p~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~WMAaCrLAS 458 (664)
T KOG3727|consen 400 PAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYARWMAACRLAS 458 (664)
T ss_pred CCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHHHHHHhhHhh
Confidence 5688889888876554442 2233322 56899999999999999999987764
No 88
>PF15408 PH_7: Pleckstrin homology domain
Probab=80.53 E-value=0.81 Score=40.90 Aligned_cols=86 Identities=14% Similarity=0.334 Sum_probs=53.1
Q ss_pred EEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccce
Q 003654 110 SGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKVA 189 (805)
Q Consensus 110 ~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~~ 189 (805)
+||||.--. ..-|+|+-+|++-.|.+|...+.--+ -+..|+..
T Consensus 1 EGYLY~~E~--~si~rRF~~L~~K~~~~~~~KGG~~L-----------------------------------~sF~L~~s 43 (104)
T PF15408_consen 1 EGYLYRDED--SSIQRRFVMLRSKQFNMYEDKGGQYL-----------------------------------CSFQLSSS 43 (104)
T ss_pred CCeEEEecc--chHHHHHHhhhhceeEEecccCCcee-----------------------------------eeeehhhh
Confidence 489986532 23789999999999999998775211 22222211
Q ss_pred E-------EEecCC--CCccEE--EEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 190 S-------IRESKS--DDKKFS--IYTG-TKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 190 s-------i~~~~~--d~~~F~--I~t~-~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
. ..+..+ .-..|- ...+ .+.+.+-|+|.+-++.||++|..-..
T Consensus 44 ~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~~~FA~S~~~~~~Wi~~mN~~s~ 98 (104)
T PF15408_consen 44 VVSHPMVNFSQAVPNLGINAFGFLMYSPSRRHVQCFASSKKVCQSWIQVMNSPSF 98 (104)
T ss_pred hhhcccccccccCCCCCeeEEEEEEecCCcchhhhhhhHHHHHHHHHHHhcChhh
Confidence 1 111111 112233 3333 47788889999999999999875443
No 89
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=79.54 E-value=5.5 Score=46.89 Aligned_cols=90 Identities=22% Similarity=0.220 Sum_probs=62.0
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEE
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLK-EGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIH 185 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~-~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~ 185 (805)
..+.|+|-|+...+ =|+|.|+|. ++.|.|+..... . ..|+|.
T Consensus 451 i~k~~~l~k~~~lf--~rkr~lllTn~~rll~~~~~~~---~--------------------------------lk~eip 493 (604)
T KOG0592|consen 451 ILKEGALEKRQGLF--ARKRMLLLTNGPRLLYVDPQNL---V--------------------------------LKGEIP 493 (604)
T ss_pred HHhHHHHHhhhhhh--hceeEEEecCCCeEEEEecccc---e--------------------------------eccccc
Confidence 55667777774433 366999995 567777773221 1 247887
Q ss_pred ccceEEEecCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcc
Q 003654 186 LKVASIRESKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMFP 235 (805)
Q Consensus 186 L~~~si~~~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~~ 235 (805)
++.+. +......+.|.|.|+.|+|.|-- =+.....|-.||..++.++.
T Consensus 494 ~~~~~-~~e~~n~~~~~i~TP~k~~~l~d-~~~~as~w~~ai~~~~~~~~ 541 (604)
T KOG0592|consen 494 WSPDL-RVELKNSSTFFIHTPNKVYYLED-PEQRASVWCKAIETVRKRYS 541 (604)
T ss_pred cCccc-ceeeccCcceEEECCccceeccC-cccchhHHHHhhhhhhhccc
Confidence 77633 22344578899999999999865 34667889999999966654
No 90
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=77.99 E-value=2.4 Score=49.82 Aligned_cols=94 Identities=17% Similarity=0.132 Sum_probs=66.2
Q ss_pred CceeEEEEEeecCCCCCceeeEEEE---eCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccce
Q 003654 106 QHGISGILFKWVNYGRGWRPRWFVL---KEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVG 182 (805)
Q Consensus 106 ~~~~~G~L~K~~n~~kgWr~RWFVL---~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G 182 (805)
+..+++.|.+--..+++|..-|++. ++-+++-|....|-. ...
T Consensus 496 ~~~~~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~qDv~----------------------------------a~~ 541 (623)
T KOG4424|consen 496 ENVICSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSPQDVR----------------------------------AQA 541 (623)
T ss_pred CceehhhHHHHhhcCccceeeeeeccCCCCccccccCCccccc----------------------------------ccc
Confidence 3566677766666788999999999 567888888877511 235
Q ss_pred EEEccceEEEe-----cCCCCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 183 EIHLKVASIRE-----SKSDDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 183 ~I~L~~~si~~-----~~~d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
.|.|.++.+.. ..+-.+.|.++.....+||.|+|++-.+.|+.-|-.|..-
T Consensus 542 ~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~~~a~~~q~qq~wl~~l~~A~~~ 597 (623)
T KOG4424|consen 542 TIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSWHLAADDEQLQQRWLEVLLLAVSG 597 (623)
T ss_pred ccccCccccCCCcccccchhcchhhhhhhcceeeeccCCHHHHHHHHHHHHhhhcc
Confidence 56666665541 1111334455556689999999999999999999888653
No 91
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=74.35 E-value=0.16 Score=60.94 Aligned_cols=90 Identities=18% Similarity=0.287 Sum_probs=68.9
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCe-EEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEcc
Q 003654 109 ISGILFKWVNYGRGWRPRWFVLKEGV-LSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLK 187 (805)
Q Consensus 109 ~~G~L~K~~n~~kgWr~RWFVL~~g~-LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~ 187 (805)
..|-+.++.|-...|+.|+|.+++.. +.|-++... ..+-+++|.
T Consensus 4 ~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~g-----------------------------------~~~~~~d~t 48 (1099)
T KOG1170|consen 4 TRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTASG-----------------------------------PLFALLDLT 48 (1099)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHhccCC-----------------------------------ccHHHHhcc
Confidence 45777777788888999999998876 555554221 124566777
Q ss_pred ceEEEecCCC--CccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 188 VASIRESKSD--DKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 188 ~~si~~~~~d--~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
.+.+.++... ...|.|+|+-|+..++|++..++..||.|++.....
T Consensus 49 ~a~~~eSs~~n~~~sf~vi~~~rk~r~~adn~ke~e~wi~~~kt~q~~ 96 (1099)
T KOG1170|consen 49 SAHVAESSTNNPRPSFCVITPVRKHRLCADNRKEMEKWINQSKTPQHL 96 (1099)
T ss_pred cccccccccCCCCCCeeEecccHHhhhhccchhHHHHhhccccchhhc
Confidence 7777665543 567999999999999999999999999999988754
No 92
>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=66.21 E-value=6.5 Score=49.97 Aligned_cols=58 Identities=24% Similarity=0.416 Sum_probs=47.8
Q ss_pred cceEEEccceEEEecCCCCccEEEEe-C---CeEEEEEcCCHHHHHHHHHHHHHHHHHcccc
Q 003654 180 PVGEIHLKVASIRESKSDDKKFSIYT-G---TKRVHLRAETREDRVKWMEALQAVKEMFPRI 237 (805)
Q Consensus 180 p~G~I~L~~~si~~~~~d~~~F~I~t-~---~kt~~L~A~s~~dr~~Wi~AL~~a~~~~~~~ 237 (805)
-.+.|.|..-.|++...|.+.|.|+. . -..|.|.|.|..||..||+.|+.++...++-
T Consensus 666 ~spVisL~~livRevAtd~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~~~ 727 (1167)
T KOG3520|consen 666 KSPVISLQKLIVREVATDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCPRN 727 (1167)
T ss_pred CCCceehHHHHHHHHhccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCCcc
Confidence 35888888776777777888777654 3 3789999999999999999999999988763
No 93
>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]
Probab=63.92 E-value=9.3 Score=45.35 Aligned_cols=94 Identities=20% Similarity=0.254 Sum_probs=56.0
Q ss_pred eeEEEEEeecCCC--------------CCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCC
Q 003654 108 GISGILFKWVNYG--------------RGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNS 173 (805)
Q Consensus 108 ~~~G~L~K~~n~~--------------kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 173 (805)
..+-||.|+|... +.-+.=|+.|-+.+|...|....++..+.+-.
T Consensus 470 S~sRwLvk~GELt~l~~~~~s~~l~~k~~~~~vylfLFnD~Llitk~k~~~~f~V~Dya--------------------- 528 (695)
T KOG3523|consen 470 SQSRWLVKRGELTQLVERRASPLLFSKRLSKTVYLFLFNDLLLITKKKSEGSFQVFDYA--------------------- 528 (695)
T ss_pred cchhhhhhccccceeecccccchhhcccccceeeeeeecceeeEeeecCCCceEEeecc---------------------
Confidence 3456777776531 11334588888888888887776555543311
Q ss_pred CCCCCccceEEEccceE--EEe------cCCCCccEEEEe--C----CeEEEEEcCCHHHHHHHHHHHH
Q 003654 174 QSRQRIPVGEIHLKVAS--IRE------SKSDDKKFSIYT--G----TKRVHLRAETREDRVKWMEALQ 228 (805)
Q Consensus 174 ~~~~~~p~G~I~L~~~s--i~~------~~~d~~~F~I~t--~----~kt~~L~A~s~~dr~~Wi~AL~ 228 (805)
+++.|.+..+. ... ..+.++-|.+.- + .-.|.|+|+|..||++||.||.
T Consensus 529 ------~r~~l~ve~~e~~~~lp~~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 529 ------PRSLLQVEKCEPELKLPGGANSLSSRPHLFLLTLLSNHQGRQTELLLSAESQSDRQRWISALR 591 (695)
T ss_pred ------chhhhhhhhcCcccCCCCCCcccccccceEEEehhhccCCCceeeeecCCchHHHHHHHHhcC
Confidence 33333333222 000 112245566532 1 2469999999999999999998
No 94
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=58.64 E-value=36 Score=33.23 Aligned_cols=34 Identities=18% Similarity=0.023 Sum_probs=13.8
Q ss_pred eeEEEEEeecCCCCCceeeEEEEeCCeEEEEeec
Q 003654 108 GISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIH 141 (805)
Q Consensus 108 ~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~ 141 (805)
+.+|-|.|++.....|-.=-..|-|+.|---|..
T Consensus 2 i~~G~L~Rk~~~~~~~~di~~~LFDh~Lll~K~k 35 (135)
T PF15405_consen 2 IYKGDLKRKGDNSFNWVDIHVYLFDHYLLLTKPK 35 (135)
T ss_dssp ---------------S-EEEEEEESSEEEEEEEE
T ss_pred ccccccccccccccccceeEEEeeccEEEEEEEE
Confidence 4679999999888889877777888888777764
No 95
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=58.14 E-value=51 Score=30.76 Aligned_cols=36 Identities=8% Similarity=0.231 Sum_probs=29.5
Q ss_pred CCCCccEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHH
Q 003654 195 KSDDKKFSIYTG-TKRVHLRAETREDRVKWMEALQAV 230 (805)
Q Consensus 195 ~~d~~~F~I~t~-~kt~~L~A~s~~dr~~Wi~AL~~a 230 (805)
++..++|.+... .-.|.|.|.+.++++.||..|+.|
T Consensus 71 PD~~nTFvLK~~~~~eyI~Ea~d~~q~~SWla~Ir~C 107 (107)
T cd01231 71 PDNLYTFVLKVDDNTDIIFEVGDEQQLNSWLAELRYC 107 (107)
T ss_pred cCcccEEEEEecCCceEEEEcCCHHHHHHHHHHHhcC
Confidence 445788998664 468999999999999999999753
No 96
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=54.85 E-value=7.6 Score=43.74 Aligned_cols=98 Identities=22% Similarity=0.264 Sum_probs=58.3
Q ss_pred ceeEEEEEeecCC--CCCceeeEEEEeCCeEEEEeecCCcccccccccccC----ceeecchhhhhcccCCCCCCCCCcc
Q 003654 107 HGISGILFKWVNY--GRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKG----SKVIGEVSMRRMSRNGNSQSRQRIP 180 (805)
Q Consensus 107 ~~~~G~L~K~~n~--~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~----~~vi~~~~~~~~~~~~~~~~~~~~p 180 (805)
+..=|||.++... .+.|++-..+|.+--|..|.+-.-.+-+-+.+.+-- .|+++..+ .
T Consensus 292 vkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~-------------~--- 355 (506)
T KOG3551|consen 292 VKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGS-------------G--- 355 (506)
T ss_pred hhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCC-------------C---
Confidence 4556999999643 456999999998877777776432121111110000 01111111 0
Q ss_pred ceEEEccceEEEecCCCCccEEEEeCC----eEEEEEcCCHHHHHHHHHHHHH
Q 003654 181 VGEIHLKVASIRESKSDDKKFSIYTGT----KRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 181 ~G~I~L~~~si~~~~~d~~~F~I~t~~----kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
.|.+ ...-+..|.+.|++ .|+.|+++|..|+..|..+|..
T Consensus 356 ~~s~---------~~g~~lsFa~RtGTrqGV~thlfrvEThrdLa~WtRslVq 399 (506)
T KOG3551|consen 356 KGSV---------IKGLTLSFATRTGTRQGVETHLFRVETHRELAAWTRSLVQ 399 (506)
T ss_pred CCCC---------cCCceEEEEEecccccceEEEEEEeccHHHHHHHHHHHHH
Confidence 0110 01113468888887 5899999999999999988753
No 97
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=49.82 E-value=19 Score=42.59 Aligned_cols=90 Identities=16% Similarity=0.211 Sum_probs=54.6
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
..++||+.-.++.-..-++.|..|+-.++.-|.+....+ =. .+|.|
T Consensus 413 ~~kEGWmvHyt~~d~lRkrHYWrldsk~itlfqn~s~~r---------yY-------------------------keIPL 458 (888)
T KOG4236|consen 413 KLKEGWMVHYTSKDNLRKRHYWRLDSKCITLFQNESTNR---------YY-------------------------KEIPL 458 (888)
T ss_pred hhhcceEEEEechhhhhhhhhheeccceeEeeecCCCce---------eE-------------------------EeecH
Confidence 568999998886543344456667766666666533211 01 22222
Q ss_pred c---------ceEEEecCCCCccEEEEeCCeEEEEEcCC------------HHHHHHHHHHHHHHH
Q 003654 187 K---------VASIRESKSDDKKFSIYTGTKRVHLRAET------------REDRVKWMEALQAVK 231 (805)
Q Consensus 187 ~---------~~si~~~~~d~~~F~I~t~~kt~~L~A~s------------~~dr~~Wi~AL~~a~ 231 (805)
+ ..+.......+++|.|.|++-+|. -.++ ....+.|-.||+.|-
T Consensus 459 sEIl~v~~~~~~~~vp~~~~phcFEI~T~~~vyf-Vge~p~~~~~~~~g~g~d~a~~w~~ai~~al 523 (888)
T KOG4236|consen 459 SEILSVSSNNGFSLVPAGTNPHCFEIRTATTVYF-VGENPSSTPGGESGVGLDAAQGWETAIQQAL 523 (888)
T ss_pred HHhheeeccCCcccCCCCCCCceEEEEeeeEEEE-ecCCCCCCccccccccchhhccCchhhhhcc
Confidence 1 111223456789999999995554 4555 555888999988763
No 98
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=49.30 E-value=24 Score=40.02 Aligned_cols=53 Identities=23% Similarity=0.397 Sum_probs=42.5
Q ss_pred ceEEEccceEEEe----cCCCCccEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 181 VGEIHLKVASIRE----SKSDDKKFSIYTGT--KRVHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 181 ~G~I~L~~~si~~----~~~d~~~F~I~t~~--kt~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
+..|.|+-|-+.. .+.+++.|.|.++. .++.|||.+..+...|..||.++...
T Consensus 215 ~k~IpLKm~yvaR~~~~~DpEnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~~ 273 (506)
T KOG3551|consen 215 RKTIPLKMAYVARNLIDADPENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVNT 273 (506)
T ss_pred ccccchhhHHHHhhCCCCCcccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHhh
Confidence 5788888766432 23457889999975 79999999999999999999998654
No 99
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=47.60 E-value=54 Score=40.39 Aligned_cols=18 Identities=28% Similarity=0.364 Sum_probs=10.0
Q ss_pred ccccccc--cCCCCCCCCCC
Q 003654 5 CCASTVL--DQNPTNPRLQP 22 (805)
Q Consensus 5 ~~~~~~~--~~~~~~~~~~~ 22 (805)
-.-++++ |-|+|.||+.|
T Consensus 515 ~s~~~~~~~~~~iP~PP~~p 534 (1102)
T KOG1924|consen 515 SSPSQLLPIDGGIPPPPPLP 534 (1102)
T ss_pred cCcccCCCCCCCCCCCCCCC
Confidence 3345555 66666655554
No 100
>PLN02372 violaxanthin de-epoxidase
Probab=45.69 E-value=4.9e+02 Score=30.23 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHccc
Q 003654 221 VKWMEALQAVKEMFPR 236 (805)
Q Consensus 221 ~~Wi~AL~~a~~~~~~ 236 (805)
..|+..|+.|.....+
T Consensus 329 ~~~~p~L~~Aa~kvG~ 344 (455)
T PLN02372 329 ESIVPELEKAAKKVGR 344 (455)
T ss_pred hhhhHHHHHHHHHcCC
Confidence 5699999999776543
No 101
>KOG3003 consensus Molecular chaperone of the GrpE family [Posttranslational modification, protein turnover, chaperones]
Probab=45.62 E-value=40 Score=35.81 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=30.4
Q ss_pred CCCCCCCCCCCC-eEEEEecCCCEEEEEEeccCCCccceeEEecCcEEEEEEe
Q 003654 508 RHCKPFNPLLGE-TYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADS 559 (805)
Q Consensus 508 r~~KPfNPiLGE-Tfe~~~~d~g~r~iaEQVSHHPPisA~~~e~~g~~~~g~~ 559 (805)
-+.+||||-+=| +|++ ++ .--||=+.+||...||+++|-.
T Consensus 181 PigekFDPn~HEAvfq~--p~----------~~k~pgtV~~v~k~Gy~L~~R~ 221 (236)
T KOG3003|consen 181 PIGEKFDPNEHEAVFQV--PD----------AAKEPGTVALVTKKGYKLNGRV 221 (236)
T ss_pred CCCCCCCcchhheeEec--cc----------cCCCCCeEEEEeccCcccCCee
Confidence 468999999877 4444 22 2278888999999999998754
No 102
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=44.53 E-value=14 Score=45.33 Aligned_cols=98 Identities=26% Similarity=0.357 Sum_probs=68.2
Q ss_pred ceeEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEc
Q 003654 107 HGISGILFKWVNYGRGWRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHL 186 (805)
Q Consensus 107 ~~~~G~L~K~~n~~kgWr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L 186 (805)
.+..|-|.|-.. ||-|+|-|.|-..+|-|-.. +. .+ .+.. +..|.|.|
T Consensus 750 ~ir~g~llK~sk--kgLqqrmfFLfsdillytsk-~~---~~----~~~f----------------------ri~g~lP~ 797 (1036)
T KOG3531|consen 750 FIRSGCLLKLSK--KGLQQRMFFLFSDILLYTSK-GP---DV----QKCF----------------------RINGDLPL 797 (1036)
T ss_pred hhhcCCchhhcc--ccchhhhhhhhhhhheeccC-CC---Ch----hhee----------------------EeccCCce
Confidence 345677777654 77899999998877776433 31 00 0111 23466666
Q ss_pred cceEEEecCC---CCccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHHcccc
Q 003654 187 KVASIRESKS---DDKKFSIYTGTKRVHLRAETREDRVKWMEALQAVKEMFPRI 237 (805)
Q Consensus 187 ~~~si~~~~~---d~~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~~~~ 237 (805)
. -.+..+.. -+++|.|+++.+..+..|.+..+..+|+.-++.++...++.
T Consensus 798 ~-l~~en~en~~s~p~~~ti~~~qk~i~vsast~~~sk~~~~~r~~~i~~~~k~ 850 (1036)
T KOG3531|consen 798 T-LTMENSENEWSVPHCFTISGAQKQIYVSASTRRESKKWEFDRRKAIDLAPKK 850 (1036)
T ss_pred E-eeeecccccccCCceEEEeccceEEEEeccchhhhhhhhhccchhhhhcccc
Confidence 5 33332222 15899999999999999999999999999999999887764
No 103
>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]
Probab=41.08 E-value=37 Score=39.58 Aligned_cols=76 Identities=17% Similarity=0.321 Sum_probs=49.3
Q ss_pred ceeeEEEEeCCeEEEEeecCCcccccccccccCceeecchhhhhcccCCCCCCCCCccceEEEccceEEEecC---CCCc
Q 003654 123 WRPRWFVLKEGVLSYYKIHGSHKIIVNEETEKGSKVIGEVSMRRMSRNGNSQSRQRIPVGEIHLKVASIRESK---SDDK 199 (805)
Q Consensus 123 Wr~RWFVL~~g~LsYYk~~~~~k~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~p~G~I~L~~~si~~~~---~d~~ 199 (805)
=+-|||+|-..+|.++....+....+ --|.+.+.+-.|..-. ...+
T Consensus 325 ~~dRy~~LF~~~llflsvs~rMs~fI-------------------------------yegKlp~tG~iV~klEdte~~~n 373 (661)
T KOG2070|consen 325 EKDRYLLLFPNVLLFLSVSPRMSGFI-------------------------------YEGKLPTTGMIVTKLEDTENHRN 373 (661)
T ss_pred hhhheeeeccceeeeeEeccccchhh-------------------------------hccccccceeEEeehhhhhcccc
Confidence 56999999888888777654311110 1245555554444221 1256
Q ss_pred cEEEEeCC-eEEEEEcCCHHHHHHHHHHHHH
Q 003654 200 KFSIYTGT-KRVHLRAETREDRVKWMEALQA 229 (805)
Q Consensus 200 ~F~I~t~~-kt~~L~A~s~~dr~~Wi~AL~~ 229 (805)
+|.|...+ -.+...+....+.++|+++|..
T Consensus 374 afeis~~ti~rIv~~c~~~~~l~~wve~ln~ 404 (661)
T KOG2070|consen 374 AFEISGSTIERIVVSCNNQQDLQEWVEHLNK 404 (661)
T ss_pred cccccccchhheeeccCChHHHHHHHHHhhh
Confidence 78886655 4455678999999999999875
No 104
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=40.70 E-value=42 Score=31.78 Aligned_cols=34 Identities=15% Similarity=0.449 Sum_probs=29.5
Q ss_pred ccEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003654 199 KKFSIYTGTKRVHLRAETREDRVKWMEALQAVKE 232 (805)
Q Consensus 199 ~~F~I~t~~kt~~L~A~s~~dr~~Wi~AL~~a~~ 232 (805)
+-|.|.|....+.|.++|..+.+.|+++|+..-.
T Consensus 71 ~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~ 104 (110)
T PF08458_consen 71 RYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLS 104 (110)
T ss_pred EEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHH
Confidence 4466899999999999999999999999987644
No 105
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=39.07 E-value=12 Score=46.23 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=43.0
Q ss_pred ccceEEEccceEEEecCCCCccEEEE-eCCeEEEEEcCCHHHHHHHHHHHHHHHHHcccc
Q 003654 179 IPVGEIHLKVASIRESKSDDKKFSIY-TGTKRVHLRAETREDRVKWMEALQAVKEMFPRI 237 (805)
Q Consensus 179 ~p~G~I~L~~~si~~~~~d~~~F~I~-t~~kt~~L~A~s~~dr~~Wi~AL~~a~~~~~~~ 237 (805)
.++|.|.+..+.|. ..+.+.+.+. .+.+++|+.+.+..+++.|+.|++.+.....+.
T Consensus 117 ~~~~~~~~~~a~i~--~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (799)
T KOG1737|consen 117 TCGGGINLVTAWIQ--NGERMDICSVDGSCQIYLVELSKKLQRQGWLHALELAPLIAVEQ 174 (799)
T ss_pred CCCCcccccccccc--cCCCcccchhhcccchhhhhhhHHHhhcchhhhhhhccchhhhc
Confidence 35799999888875 3334444444 347899999999999999999999996655543
No 106
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=32.38 E-value=14 Score=41.05 Aligned_cols=29 Identities=24% Similarity=0.563 Sum_probs=22.0
Q ss_pred CCCceeEEEEEeecC----C-CCCceeeEEEEeC
Q 003654 104 ADQHGISGILFKWVN----Y-GRGWRPRWFVLKE 132 (805)
Q Consensus 104 a~~~~~~G~L~K~~n----~-~kgWr~RWFVL~~ 132 (805)
...+.++|+|+|+.. . .+.|++|||.|.+
T Consensus 280 ~~~~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~~ 313 (313)
T cd05394 280 EPVHLKEGEMYKRAQGRTRIGKKNFKKRWFCLTS 313 (313)
T ss_pred CchhhHHHHHHhhccCCCccccccchhheeecCC
Confidence 344789999999862 2 3579999999863
No 107
>PF10504 DUF2452: Protein of unknown function (DUF2452); InterPro: IPR019534 This entry contains proteins that have no known function.
Probab=32.32 E-value=77 Score=31.87 Aligned_cols=25 Identities=24% Similarity=0.484 Sum_probs=20.2
Q ss_pred CCCCCCCCCCeEEEEecCCCEEEEE
Q 003654 510 CKPFNPLLGETYEADYPDKGLRFFS 534 (805)
Q Consensus 510 ~KPfNPiLGETfe~~~~d~g~r~ia 534 (805)
+==|.|+.|+||.+...++|..|++
T Consensus 85 ~cnF~pipG~iYhLY~r~~G~~ylS 109 (159)
T PF10504_consen 85 KCNFEPIPGQIYHLYRRENGQDYLS 109 (159)
T ss_pred ccCceecCCCEEEEEECCCCCEEEE
Confidence 3458999999999988777877765
No 108
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a family of proteins which appears to have a highly conserved zinc finger domain at the C-terminal end, described as -C-X2-CH-X3-H-X5-C-X2-C-. The structure is predicted to contain a coiled coil. Members of this family are annotated as being tumour-associated antigen HCA127 in humans, but this could not be confirmed.
Probab=32.27 E-value=1.6e+02 Score=31.41 Aligned_cols=28 Identities=21% Similarity=0.211 Sum_probs=15.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 003654 285 LHKHLVVLKQRQLLLIDTLRQLETEKVD 312 (805)
Q Consensus 285 l~~~l~~~~~~~~~l~~~l~~le~~~~~ 312 (805)
.-+.|.+..+++..|=+.+++++.++.+
T Consensus 51 h~eeLrqI~~DIn~lE~iIkqa~~er~~ 78 (230)
T PF10146_consen 51 HVEELRQINQDINTLENIIKQAESERNK 78 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666666655555555544433
No 109
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=30.65 E-value=19 Score=39.95 Aligned_cols=27 Identities=22% Similarity=0.527 Sum_probs=20.3
Q ss_pred CceeEEEEEeec--C--C-CCCceeeEEEEeC
Q 003654 106 QHGISGILFKWV--N--Y-GRGWRPRWFVLKE 132 (805)
Q Consensus 106 ~~~~~G~L~K~~--n--~-~kgWr~RWFVL~~ 132 (805)
-+.++|.|+|+. . . .|.||+|||.|.+
T Consensus 279 ~~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~ 310 (310)
T cd05134 279 ILLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN 310 (310)
T ss_pred chhhhhhHHHhcccCCcccccchhheeeecCC
Confidence 378899999854 1 2 3579999999964
No 110
>KOG4047 consensus Docking protein 1 (p62dok) [Signal transduction mechanisms]
Probab=26.19 E-value=34 Score=39.64 Aligned_cols=30 Identities=17% Similarity=-0.045 Sum_probs=23.8
Q ss_pred CceeEEEEEeecCCC--CCceeeEEEEeCCeE
Q 003654 106 QHGISGILFKWVNYG--RGWRPRWFVLKEGVL 135 (805)
Q Consensus 106 ~~~~~G~L~K~~n~~--kgWr~RWFVL~~g~L 135 (805)
..++.|+++-+.+.+ |.|+++|.+|..|.+
T Consensus 7 ~~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~ 38 (429)
T KOG4047|consen 7 CLVKDGVPDNHRNKFKVKNVRDDGAELGSGSM 38 (429)
T ss_pred cccccCccchhhhhhccccccccceeeecccc
Confidence 357789999887755 489999999977654
No 111
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=26.16 E-value=20 Score=40.32 Aligned_cols=26 Identities=27% Similarity=0.390 Sum_probs=19.9
Q ss_pred CceeEEEEEeecC-----CCC-CceeeEEEEe
Q 003654 106 QHGISGILFKWVN-----YGR-GWRPRWFVLK 131 (805)
Q Consensus 106 ~~~~~G~L~K~~n-----~~k-gWr~RWFVL~ 131 (805)
-..++|+++|+.. .++ +|++|||.|.
T Consensus 302 ~~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 302 VTVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred chhhhhHhhhccccCCCCcccccccceeeecC
Confidence 3688999999873 223 6999999873
No 112
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=25.68 E-value=23 Score=39.51 Aligned_cols=27 Identities=19% Similarity=0.310 Sum_probs=20.8
Q ss_pred CCceeEEEEEeecC-----CCCCceeeEEEEe
Q 003654 105 DQHGISGILFKWVN-----YGRGWRPRWFVLK 131 (805)
Q Consensus 105 ~~~~~~G~L~K~~n-----~~kgWr~RWFVL~ 131 (805)
..+.++|++.|+.. ..+.||+|||.|.
T Consensus 284 ~~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt 315 (315)
T cd05128 284 PVVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT 315 (315)
T ss_pred chhhhhhhhHhhcccCCCccccchhheeeecC
Confidence 34789999999862 3457999999983
No 113
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=24.93 E-value=4.2e+02 Score=26.44 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=24.8
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHH
Q 003654 206 GTKRVHLRAETREDRVKWMEALQAVKEM 233 (805)
Q Consensus 206 ~~kt~~L~A~s~~dr~~Wi~AL~~a~~~ 233 (805)
+.++|+||+.+.+.+...|..++.....
T Consensus 129 pE~vfqLCcS~~E~k~~flK~Irsilre 156 (160)
T cd01255 129 PEKVFVLCCSTAESRNAFLKTIRSILRE 156 (160)
T ss_pred CcceEEEecCCHHHHHHHHHHHHHHHHH
Confidence 4589999999999999999999987654
No 114
>PF14254 DUF4348: Domain of unknown function (DUF4348); PDB: 3SBU_A.
Probab=23.95 E-value=92 Score=33.90 Aligned_cols=40 Identities=23% Similarity=0.396 Sum_probs=24.0
Q ss_pred ccceeeeeeecceeeEeecceE-EEEc-CCcceEEEEEeecC
Q 003654 592 KVTTSIYNLILGKLYCDHYGTM-RIDG-NREYSCKLKFKEQS 631 (805)
Q Consensus 592 ~pt~~i~nii~G~~~~e~~G~~-~I~~-~~g~~~~i~F~~~~ 631 (805)
.|...|+||+.|..|.+-..++ .|++ .+|+..+|.|+..|
T Consensus 225 lP~~~i~NI~YGQky~~s~~KIl~~rGi~NG~e~~l~Fk~~~ 266 (273)
T PF14254_consen 225 LPKGKIYNINYGQKYTESNQKILVFRGIANGLETELYFKKRG 266 (273)
T ss_dssp --SSEEEEEESS----T-SEEEEEEEESSS--EEEEEEEEET
T ss_pred CCccceeeeecccccCCCCceEEEEEeecCceeEEEEEEEcC
Confidence 5888999999999999944444 3446 58999999998753
No 115
>PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4.
Probab=22.65 E-value=5e+02 Score=28.47 Aligned_cols=107 Identities=17% Similarity=0.234 Sum_probs=58.9
Q ss_pred EEcCCHHHHHHHHHHHHHHHHHcccccCCCCCCCC--------CC--CccccHHHHHHHHHhHhHhHHHHHH--------
Q 003654 212 LRAETREDRVKWMEALQAVKEMFPRISNSDYFVPM--------DN--GVAVSTEKLRQRLLDEGVTEDAIQE-------- 273 (805)
Q Consensus 212 L~A~s~~dr~~Wi~AL~~a~~~~~~~~~~~~~~~~--------~~--~~~~s~~~L~~rl~e~~~~~~lik~-------- 273 (805)
++..|..-|..-|++|-..+.........+++... .| .+.+...+||.+|.+..........
T Consensus 116 c~lkS~~~RS~yLe~Lc~IIqeLq~t~~~~LS~~dl~e~~~~l~DLesa~vkV~WLR~~L~Ei~Ea~e~~~~~~~~e~ek 195 (269)
T PF05278_consen 116 CKLKSQQFRSYYLECLCDIIQELQSTPLKELSESDLKEMIATLKDLESAKVKVDWLRSKLEEILEAKEIYDQHETREEEK 195 (269)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHhcCcHhhhhHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34678889999999999999887432112222110 00 2457777899998665433221111
Q ss_pred --HHHH---hhhhhhhh-------HHHHHHHHHHHHHHHHHHHHHHHhhhccccchh
Q 003654 274 --SEDI---MRDEFSAL-------HKHLVVLKQRQLLLIDTLRQLETEKVDLEDTVV 318 (805)
Q Consensus 274 --~e~~---~~~e~s~l-------~~~l~~~~~~~~~l~~~l~~le~~~~~le~~~~ 318 (805)
++.. +..|++.+ ...++.++++...+.+.|.+|+.+..++..++.
T Consensus 196 e~~~r~l~~~~~ELe~~~EeL~~~Eke~~e~~~~i~e~~~rl~~l~~~~~~l~k~~~ 252 (269)
T PF05278_consen 196 EEKDRKLELKKEELEELEEELKQKEKEVKEIKERITEMKGRLGELEMESTRLSKTIK 252 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 12233333 344445555666666666667766666666654
No 116
>KOG4797 consensus Transcriptional regulator [Transcription]
Probab=21.11 E-value=2.6e+02 Score=26.47 Aligned_cols=44 Identities=25% Similarity=0.176 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccchhchhhhhhhhcCCCc
Q 003654 286 HKHLVVLKQRQLLLIDTLRQLETEKVDLEDTVVNESQRQWKEQGASP 332 (805)
Q Consensus 286 ~~~l~~~~~~~~~l~~~l~~le~~~~~le~~~~~~~~~~l~~~~~~~ 332 (805)
.+.+..|+.++..|.+...+||+|+.-|...+ |.++|+.-+..+
T Consensus 66 REEVe~Lk~qI~eL~er~~~Le~EN~lLk~~~---spe~L~ql~~~~ 109 (123)
T KOG4797|consen 66 REEVEVLKEQIRELEERNSALERENSLLKTLA---SPEQLAQLPAQL 109 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CHHHHHHHHHhc
Confidence 34445566666778888888888766554444 346666655443
Done!