Query 003655
Match_columns 805
No_of_seqs 393 out of 3621
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 03:31:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003655.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003655hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 1E-199 2E-204 1739.2 73.9 805 1-805 2-809 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 1E-192 2E-197 1680.6 76.2 780 24-803 1-784 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 3E-171 7E-176 1393.4 30.7 548 7-554 1-550 (550)
4 TIGR02468 sucrsPsyn_pln sucros 100.0 8.7E-59 1.9E-63 555.8 40.1 454 276-767 169-671 (1050)
5 KOG0853 Glycosyltransferase [C 100.0 7.2E-60 1.6E-64 525.5 26.9 494 193-794 1-495 (495)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 1.3E-51 2.8E-56 470.5 41.0 426 277-764 1-438 (439)
7 PLN02939 transferase, transfer 100.0 6.2E-46 1.3E-50 439.2 48.6 515 199-767 383-967 (977)
8 PRK00654 glgA glycogen synthas 100.0 2E-43 4.4E-48 406.0 39.3 427 277-766 1-462 (466)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 8.1E-43 1.8E-47 392.3 39.0 399 279-766 1-401 (405)
10 TIGR02095 glgA glycogen/starch 100.0 4.8E-42 1E-46 395.3 40.5 434 277-766 1-472 (473)
11 cd03800 GT1_Sucrose_synthase T 100.0 2.5E-41 5.5E-46 376.1 39.7 397 278-761 1-397 (398)
12 PLN02316 synthase/transferase 100.0 7.3E-41 1.6E-45 403.0 42.6 407 276-766 587-1033(1036)
13 PRK14098 glycogen synthase; Pr 100.0 1.1E-40 2.3E-45 384.7 39.9 440 274-766 4-485 (489)
14 PRK10307 putative glycosyl tra 100.0 1.9E-40 4.2E-45 374.7 38.9 396 277-766 1-407 (412)
15 cd03791 GT1_Glycogen_synthase_ 100.0 4.2E-40 9.2E-45 378.8 40.0 432 278-765 1-475 (476)
16 cd03796 GT1_PIG-A_like This fa 100.0 4.8E-40 1E-44 370.2 36.5 365 278-766 1-367 (398)
17 PRK14099 glycogen synthase; Pr 100.0 2.2E-39 4.8E-44 373.4 40.6 438 276-767 3-479 (485)
18 TIGR02149 glgA_Coryne glycogen 100.0 1.1E-38 2.4E-43 355.5 38.2 378 277-766 1-386 (388)
19 cd04962 GT1_like_5 This family 100.0 2.9E-38 6.4E-43 349.0 39.4 366 277-766 1-370 (371)
20 PRK15427 colanic acid biosynth 100.0 1.7E-38 3.7E-43 359.1 37.2 281 403-766 116-405 (406)
21 PLN02871 UDP-sulfoquinovose:DA 100.0 1.6E-38 3.5E-43 365.3 37.2 375 274-767 56-435 (465)
22 PRK15484 lipopolysaccharide 1, 100.0 5.9E-38 1.3E-42 351.6 38.2 375 275-767 1-378 (380)
23 cd03818 GT1_ExpC_like This fam 100.0 1.1E-36 2.3E-41 342.6 38.8 364 316-761 15-395 (396)
24 cd03805 GT1_ALG2_like This fam 100.0 5.7E-37 1.2E-41 342.3 35.2 386 277-760 1-392 (392)
25 TIGR03088 stp2 sugar transfera 100.0 1.9E-36 4E-41 336.8 36.5 365 278-766 3-372 (374)
26 cd05844 GT1_like_7 Glycosyltra 100.0 1.6E-36 3.4E-41 334.7 33.7 280 404-762 81-366 (367)
27 PRK15179 Vi polysaccharide bio 100.0 3.5E-36 7.6E-41 355.9 37.2 460 200-766 203-693 (694)
28 cd04955 GT1_like_6 This family 100.0 1.3E-35 2.9E-40 325.7 38.6 361 278-765 1-363 (363)
29 PRK15490 Vi polysaccharide bio 100.0 6.8E-36 1.5E-40 339.6 34.8 400 295-766 169-575 (578)
30 KOG1111 N-acetylglucosaminyltr 100.0 9.6E-37 2.1E-41 321.3 25.7 362 277-764 1-364 (426)
31 cd03792 GT1_Trehalose_phosphor 100.0 1.9E-35 4.2E-40 329.3 34.8 287 403-766 83-371 (372)
32 cd03821 GT1_Bme6_like This fam 100.0 6E-35 1.3E-39 317.2 36.8 372 278-761 1-374 (375)
33 cd03819 GT1_WavL_like This fam 100.0 1.7E-35 3.8E-40 324.1 32.7 347 298-756 8-355 (355)
34 cd03799 GT1_amsK_like This is 100.0 5.6E-34 1.2E-38 311.4 36.6 271 404-760 78-355 (355)
35 cd03813 GT1_like_3 This family 100.0 3.8E-35 8.3E-40 338.3 27.2 292 404-765 172-475 (475)
36 cd03795 GT1_like_4 This family 100.0 8.3E-34 1.8E-38 310.3 36.5 354 278-757 1-357 (357)
37 cd03794 GT1_wbuB_like This fam 100.0 1.3E-33 2.8E-38 307.7 37.3 387 278-761 1-394 (394)
38 cd03801 GT1_YqgM_like This fam 100.0 2.7E-33 5.8E-38 301.3 38.5 374 278-765 1-374 (374)
39 cd03814 GT1_like_2 This family 100.0 1.6E-33 3.5E-38 306.7 36.2 363 278-765 1-364 (364)
40 cd03802 GT1_AviGT4_like This f 100.0 2.1E-33 4.6E-38 305.2 36.5 333 277-765 1-335 (335)
41 cd03817 GT1_UGDG_like This fam 100.0 4.1E-33 8.9E-38 303.2 37.6 370 278-765 1-372 (374)
42 cd04951 GT1_WbdM_like This fam 100.0 3.4E-33 7.4E-38 305.8 36.5 281 404-765 78-359 (360)
43 cd03822 GT1_ecORF704_like This 100.0 6.3E-33 1.4E-37 302.7 38.5 357 278-765 1-366 (366)
44 cd03807 GT1_WbnK_like This fam 100.0 3.4E-33 7.3E-38 302.3 34.4 363 278-765 1-365 (365)
45 cd03816 GT1_ALG1_like This fam 100.0 3.5E-33 7.6E-38 316.7 35.7 393 274-761 1-411 (415)
46 PRK09922 UDP-D-galactose:(gluc 100.0 1.2E-33 2.6E-38 314.0 29.9 267 404-765 83-354 (359)
47 cd03812 GT1_CapH_like This fam 100.0 2.1E-33 4.5E-38 308.0 31.3 347 278-749 1-348 (358)
48 PLN02846 digalactosyldiacylgly 100.0 7.5E-33 1.6E-37 313.6 33.7 373 275-767 3-392 (462)
49 cd03806 GT1_ALG11_like This fa 100.0 9.5E-33 2.1E-37 313.5 34.7 379 279-758 3-418 (419)
50 cd03825 GT1_wcfI_like This fam 100.0 9.2E-33 2E-37 303.0 33.5 343 277-766 1-364 (365)
51 PLN02949 transferase, transfer 100.0 2.1E-32 4.5E-37 313.2 36.5 395 271-766 28-456 (463)
52 cd03820 GT1_amsD_like This fam 100.0 3.7E-32 8E-37 291.6 34.9 345 278-761 1-347 (348)
53 cd03808 GT1_cap1E_like This fa 100.0 5.5E-32 1.2E-36 291.6 35.8 356 278-761 1-358 (359)
54 cd03809 GT1_mtfB_like This fam 100.0 1.1E-32 2.4E-37 300.6 30.0 364 278-761 1-364 (365)
55 cd03798 GT1_wlbH_like This fam 100.0 1.7E-31 3.7E-36 288.7 37.7 284 403-765 91-375 (377)
56 cd03823 GT1_ExpE7_like This fa 100.0 8.7E-32 1.9E-36 292.0 34.9 354 278-765 1-358 (359)
57 PRK10125 putative glycosyl tra 100.0 2.1E-32 4.5E-37 309.1 30.6 278 403-766 92-404 (405)
58 cd03811 GT1_WabH_like This fam 100.0 3.2E-31 6.9E-36 284.5 32.6 272 404-752 80-352 (353)
59 TIGR03087 stp1 sugar transfera 100.0 4.4E-32 9.5E-37 305.4 26.4 283 404-765 103-395 (397)
60 TIGR02918 accessory Sec system 100.0 1.5E-31 3.3E-36 308.8 30.8 280 403-766 209-499 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 9.5E-31 2.1E-35 296.1 31.3 276 403-761 125-406 (407)
62 COG0297 GlgA Glycogen synthase 100.0 2.8E-29 6.1E-34 284.7 34.5 438 277-767 1-478 (487)
63 PLN02275 transferase, transfer 100.0 2.4E-29 5.3E-34 281.1 29.9 318 316-725 23-370 (371)
64 cd04949 GT1_gtfA_like This fam 100.0 3.2E-29 6.8E-34 278.4 30.0 273 404-760 98-372 (372)
65 cd03804 GT1_wbaZ_like This fam 100.0 1.8E-29 4E-34 278.3 24.7 263 404-760 82-350 (351)
66 PHA01630 putative group 1 glyc 100.0 9.3E-29 2E-33 272.1 25.9 258 411-767 52-331 (331)
67 PLN02501 digalactosyldiacylgly 100.0 1.1E-27 2.4E-32 274.9 33.9 273 404-766 433-709 (794)
68 cd03793 GT1_Glycogen_synthase_ 100.0 2.1E-26 4.6E-31 262.4 31.5 335 403-766 146-586 (590)
69 PRK00726 murG undecaprenyldiph 99.9 1.9E-25 4.1E-30 247.7 30.9 343 277-765 2-356 (357)
70 PHA01633 putative glycosyl tra 99.9 2.8E-25 6.2E-30 243.1 26.9 224 469-761 89-334 (335)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 1.5E-25 3.3E-30 257.2 24.7 322 393-762 120-457 (460)
72 cd03785 GT1_MurG MurG is an N- 99.9 2.1E-24 4.6E-29 237.7 30.0 324 298-757 8-348 (350)
73 TIGR01133 murG undecaprenyldip 99.9 4.2E-24 9.1E-29 235.2 28.9 314 316-757 19-345 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 1.4E-23 3.1E-28 239.9 27.8 323 391-763 114-453 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 2.6E-23 5.6E-28 236.4 29.0 285 404-765 123-418 (425)
76 PRK13609 diacylglycerol glucos 99.9 2.7E-22 5.8E-27 224.6 26.4 263 404-766 103-371 (380)
77 PF00534 Glycos_transf_1: Glyc 99.9 3.2E-23 7E-28 205.2 16.5 165 560-746 7-172 (172)
78 cd04950 GT1_like_1 Glycosyltra 99.9 5.2E-21 1.1E-25 214.1 31.5 267 402-765 99-370 (373)
79 PLN03063 alpha,alpha-trehalose 99.9 2.4E-21 5.1E-26 234.5 26.5 333 384-766 127-477 (797)
80 PLN02605 monogalactosyldiacylg 99.9 1.2E-20 2.5E-25 212.0 27.8 263 404-764 99-379 (382)
81 TIGR02094 more_P_ylases alpha- 99.9 1E-19 2.2E-24 213.3 30.8 345 397-764 153-598 (601)
82 cd01635 Glycosyltransferase_GT 99.9 7E-20 1.5E-24 186.1 25.2 121 575-710 109-229 (229)
83 PRK14501 putative bifunctional 99.9 1.9E-20 4E-25 226.4 23.9 326 392-767 121-463 (726)
84 COG0438 RfaG Glycosyltransfera 99.8 4.7E-19 1E-23 187.7 27.3 291 406-767 84-377 (381)
85 PRK13608 diacylglycerol glucos 99.8 2.8E-19 6.2E-24 201.5 25.4 262 404-765 103-370 (391)
86 TIGR00236 wecB UDP-N-acetylglu 99.8 4.8E-18 1E-22 189.4 22.7 273 404-762 85-363 (365)
87 TIGR02398 gluc_glyc_Psyn gluco 99.8 3.4E-17 7.3E-22 187.2 28.8 323 394-762 122-478 (487)
88 PRK09814 beta-1,6-galactofuran 99.8 2.5E-17 5.4E-22 181.8 24.5 245 405-759 63-324 (333)
89 PRK00025 lpxB lipid-A-disaccha 99.8 1.1E-16 2.5E-21 178.8 26.1 249 404-747 84-356 (380)
90 KOG1387 Glycosyltransferase [C 99.8 7.8E-16 1.7E-20 162.5 30.2 295 398-764 143-456 (465)
91 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 7.3E-17 1.6E-21 178.9 22.9 252 404-740 87-345 (363)
92 cd04299 GT1_Glycogen_Phosphory 99.7 3.5E-16 7.5E-21 186.8 28.7 344 398-764 241-687 (778)
93 PLN03064 alpha,alpha-trehalose 99.7 4.4E-15 9.4E-20 179.8 28.6 321 392-764 219-559 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 5.7E-15 1.2E-19 171.4 26.4 169 570-763 319-518 (519)
95 PF13692 Glyco_trans_1_4: Glyc 99.6 5.8E-15 1.3E-19 140.3 9.6 130 570-726 2-133 (135)
96 PF05693 Glycogen_syn: Glycoge 99.6 2E-13 4.2E-18 155.8 21.8 344 394-767 131-582 (633)
97 KOG2941 Beta-1,4-mannosyltrans 99.5 3.2E-12 7E-17 135.6 27.4 376 318-761 33-436 (444)
98 TIGR00215 lpxB lipid-A-disacch 99.5 1.4E-12 3E-17 147.1 25.5 250 404-745 88-364 (385)
99 PF13524 Glyco_trans_1_2: Glyc 99.4 3.6E-12 7.7E-17 113.9 10.8 92 665-762 1-92 (92)
100 PF00982 Glyco_transf_20: Glyc 99.3 1.4E-10 3E-15 133.4 22.3 323 393-764 130-472 (474)
101 PF13579 Glyco_trans_4_4: Glyc 99.3 1.1E-11 2.4E-16 119.3 7.9 160 300-525 1-160 (160)
102 PF13439 Glyco_transf_4: Glyco 99.2 3.9E-11 8.5E-16 117.4 11.6 168 297-531 9-176 (177)
103 PRK12446 undecaprenyldiphospho 99.2 1.1E-08 2.4E-13 114.1 31.2 248 403-763 89-348 (352)
104 PRK10117 trehalose-6-phosphate 99.2 3.9E-09 8.5E-14 120.3 26.0 325 393-765 112-452 (474)
105 COG0707 MurG UDP-N-acetylgluco 99.2 4.2E-08 9.2E-13 109.1 33.3 239 404-747 90-339 (357)
106 PLN02205 alpha,alpha-trehalose 99.2 4.6E-09 1E-13 128.4 26.3 335 384-764 180-549 (854)
107 TIGR02919 accessory Sec system 99.1 7E-09 1.5E-13 118.3 24.7 144 570-747 282-426 (438)
108 COG0380 OtsA Trehalose-6-phosp 99.1 5.2E-08 1.1E-12 110.9 26.5 327 392-764 135-477 (486)
109 cd03784 GT1_Gtf_like This fami 99.0 9.8E-08 2.1E-12 107.7 25.5 123 568-726 238-370 (401)
110 PF09314 DUF1972: Domain of un 98.9 3.5E-08 7.7E-13 99.4 15.1 182 276-527 1-185 (185)
111 TIGR01426 MGT glycosyltransfer 98.9 1.8E-06 3.9E-11 97.4 29.6 111 636-763 273-389 (392)
112 PF08323 Glyco_transf_5: Starc 98.9 6.7E-09 1.4E-13 110.1 8.9 186 278-489 1-232 (245)
113 TIGR03492 conserved hypothetic 98.8 1.9E-06 4.2E-11 97.7 26.1 271 403-761 91-393 (396)
114 PF13528 Glyco_trans_1_3: Glyc 98.7 7.8E-07 1.7E-11 97.1 21.3 115 568-722 191-314 (318)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 1.4E-06 2.9E-11 97.9 22.7 266 404-763 92-364 (365)
116 COG1519 KdtA 3-deoxy-D-manno-o 98.6 5E-05 1.1E-09 84.6 29.1 168 570-764 231-415 (419)
117 PF13477 Glyco_trans_4_2: Glyc 98.5 1.4E-06 3.1E-11 83.2 13.3 123 316-480 15-139 (139)
118 PF02350 Epimerase_2: UDP-N-ac 98.4 1.5E-05 3.4E-10 88.7 21.1 268 405-764 67-345 (346)
119 TIGR00661 MJ1255 conserved hyp 98.3 0.0001 2.2E-09 81.1 23.6 69 637-715 228-302 (321)
120 TIGR03590 PseG pseudaminic aci 98.3 5.4E-05 1.2E-09 81.9 20.5 97 570-694 171-268 (279)
121 PHA03392 egt ecdysteroid UDP-g 98.3 0.00046 1E-08 80.9 29.5 140 570-747 297-447 (507)
122 PF13844 Glyco_transf_41: Glyc 98.3 2.3E-05 4.9E-10 89.6 17.3 184 557-766 274-466 (468)
123 PF04007 DUF354: Protein of un 98.1 0.00052 1.1E-08 76.0 22.4 276 315-724 17-306 (335)
124 COG1819 Glycosyl transferases, 97.9 0.00071 1.5E-08 77.2 19.9 156 569-764 237-399 (406)
125 cd04300 GT1_Glycogen_Phosphory 97.9 0.00044 9.6E-09 83.4 18.7 151 560-719 520-688 (797)
126 PLN02448 UDP-glycosyltransfera 97.9 0.014 3E-07 67.7 30.4 144 568-745 273-429 (459)
127 KOG3742 Glycogen synthase [Car 97.8 0.00014 3E-09 80.3 11.5 98 662-760 500-606 (692)
128 PF02684 LpxB: Lipid-A-disacch 97.8 0.0031 6.7E-08 70.8 21.7 240 404-738 81-346 (373)
129 COG0381 WecB UDP-N-acetylgluco 97.7 0.024 5.2E-07 63.1 26.1 275 404-767 91-371 (383)
130 COG3914 Spy Predicted O-linked 97.6 0.0011 2.3E-08 76.2 15.7 181 559-765 421-612 (620)
131 COG4641 Uncharacterized protei 97.6 0.0045 9.8E-08 68.2 18.7 117 638-765 237-360 (373)
132 COG0763 LpxB Lipid A disacchar 97.5 0.0063 1.4E-07 67.5 18.8 199 403-692 83-289 (381)
133 PRK14986 glycogen phosphorylas 97.4 0.0019 4.2E-08 78.0 14.9 153 560-721 533-703 (815)
134 TIGR02093 P_ylase glycogen/sta 97.4 0.0019 4E-08 78.0 14.7 151 560-719 517-685 (794)
135 PRK14985 maltodextrin phosphor 97.4 0.0021 4.5E-08 77.5 14.2 145 560-712 519-681 (798)
136 COG0058 GlgP Glucan phosphoryl 97.3 0.0047 1E-07 73.9 16.4 144 562-713 479-631 (750)
137 PLN02208 glycosyltransferase f 97.1 0.76 1.6E-05 53.2 31.4 94 638-745 311-415 (442)
138 PRK01021 lpxB lipid-A-disaccha 97.1 0.055 1.2E-06 63.9 21.8 196 404-692 309-513 (608)
139 PF00343 Phosphorylase: Carboh 96.9 0.055 1.2E-06 64.9 20.1 149 560-717 434-600 (713)
140 PLN02562 UDP-glycosyltransfera 96.9 1 2.2E-05 52.3 30.2 88 637-738 327-419 (448)
141 PRK10017 colanic acid biosynth 96.9 0.79 1.7E-05 52.8 29.0 104 628-746 297-406 (426)
142 PF12000 Glyco_trans_4_3: Gkyc 96.9 0.0092 2E-07 59.8 11.0 110 393-531 55-170 (171)
143 PLN03007 UDP-glucosyltransfera 96.7 1.9 4.1E-05 50.5 34.1 80 637-726 344-438 (482)
144 PRK02797 4-alpha-L-fucosyltran 96.7 0.28 6E-06 53.4 21.3 169 570-766 145-316 (322)
145 PLN02863 UDP-glucoronosyl/UDP- 96.5 2.7 5.9E-05 49.2 31.8 118 638-768 343-473 (477)
146 PLN02554 UDP-glycosyltransfera 96.3 3.3 7.1E-05 48.5 30.3 88 638-738 342-447 (481)
147 PLN02210 UDP-glucosyl transfer 96.3 3.2 6.9E-05 48.3 33.5 133 569-726 269-413 (456)
148 PLN00414 glycosyltransferase f 96.1 4 8.7E-05 47.4 30.4 92 640-745 314-416 (446)
149 KOG1050 Trehalose-6-phosphate 95.9 0.56 1.2E-05 57.1 20.3 154 568-727 274-439 (732)
150 PRK14089 ipid-A-disaccharide s 95.8 0.14 3.1E-06 57.2 14.2 90 571-692 169-260 (347)
151 PF06258 Mito_fiss_Elm1: Mitoc 95.8 0.78 1.7E-05 50.6 19.6 110 568-696 145-259 (311)
152 COG1817 Uncharacterized protei 95.8 0.67 1.4E-05 50.3 18.1 56 663-725 253-311 (346)
153 PLN02173 UDP-glucosyl transfer 95.8 5.4 0.00012 46.3 32.7 80 637-726 316-406 (449)
154 PF08288 PIGA: PIGA (GPI ancho 95.5 0.072 1.6E-06 47.1 8.0 71 357-438 13-85 (90)
155 COG4671 Predicted glycosyl tra 95.3 3 6.6E-05 46.2 21.1 133 568-726 218-363 (400)
156 PF07429 Glyco_transf_56: 4-al 95.0 1.4 3.1E-05 48.7 17.8 122 570-704 184-308 (360)
157 PF11440 AGT: DNA alpha-glucos 94.9 2.2 4.8E-05 45.7 18.2 145 567-725 177-350 (355)
158 PF04464 Glyphos_transf: CDP-G 94.2 1.1 2.4E-05 50.1 15.6 238 406-726 79-334 (369)
159 COG3980 spsG Spore coat polysa 94.1 1.7 3.7E-05 46.7 15.3 140 569-744 158-305 (318)
160 PLN02992 coniferyl-alcohol glu 93.2 21 0.00046 41.8 30.2 78 639-726 339-425 (481)
161 COG3660 Predicted nucleoside-d 93.2 6.8 0.00015 41.8 17.7 112 567-697 159-276 (329)
162 PF00201 UDPGT: UDP-glucoronos 92.9 0.31 6.8E-06 56.9 8.6 137 569-741 276-418 (500)
163 PF05159 Capsule_synth: Capsul 92.1 14 0.0003 39.6 19.3 102 567-692 114-224 (269)
164 PF04101 Glyco_tran_28_C: Glyc 91.6 0.1 2.3E-06 51.5 2.1 91 638-743 55-155 (167)
165 PLN02670 transferase, transfer 90.0 11 0.00023 44.2 17.0 111 640-765 341-464 (472)
166 PLN02167 UDP-glycosyltransfera 88.6 5.6 0.00012 46.5 13.4 79 638-726 340-432 (475)
167 PLN02410 UDP-glucoronosyl/UDP- 88.5 8.1 0.00017 44.9 14.5 92 638-744 324-421 (451)
168 cd03789 GT1_LPS_heptosyltransf 88.1 3 6.4E-05 44.8 10.1 98 572-692 124-223 (279)
169 PLN03004 UDP-glycosyltransfera 88.1 11 0.00024 43.8 15.2 84 638-737 334-429 (451)
170 PLN02152 indole-3-acetate beta 83.9 25 0.00055 40.9 15.4 141 569-726 261-415 (455)
171 PLN02764 glycosyltransferase f 83.0 42 0.0009 39.1 16.6 77 640-726 319-405 (453)
172 PRK10422 lipopolysaccharide co 82.9 9 0.00019 42.7 11.0 103 569-692 183-287 (352)
173 PRK05562 precorrin-2 dehydroge 82.7 56 0.0012 34.4 15.9 158 601-789 48-212 (223)
174 PLN00164 glucosyltransferase; 82.7 18 0.00039 42.5 13.7 92 640-745 341-445 (480)
175 PF01075 Glyco_transf_9: Glyco 82.6 9.5 0.00021 39.9 10.5 103 568-692 104-208 (247)
176 PLN03015 UDP-glucosyl transfer 82.3 1.1E+02 0.0024 35.9 31.4 77 640-726 337-424 (470)
177 TIGR02195 heptsyl_trn_II lipop 82.2 12 0.00026 41.3 11.5 102 567-692 171-276 (334)
178 PLN02555 limonoid glucosyltran 81.7 38 0.00082 39.8 15.8 94 637-745 336-441 (480)
179 PF11997 DUF3492: Domain of un 81.6 2.3 5.1E-05 45.8 5.5 80 404-483 171-256 (268)
180 TIGR03609 S_layer_CsaB polysac 80.9 79 0.0017 34.2 17.2 86 585-692 190-275 (298)
181 COG2327 WcaK Polysaccharide py 80.7 1.1E+02 0.0024 34.9 27.3 88 638-738 266-357 (385)
182 PF10087 DUF2325: Uncharacteri 78.1 5.2 0.00011 36.1 5.7 84 604-701 2-90 (97)
183 PF06925 MGDG_synth: Monogalac 77.1 14 0.00031 36.6 9.2 60 404-486 88-151 (169)
184 TIGR02201 heptsyl_trn_III lipo 76.5 21 0.00045 39.5 11.2 102 570-692 182-285 (344)
185 PF12038 DUF3524: Domain of un 74.6 8.1 0.00018 38.6 6.4 110 404-526 58-168 (168)
186 TIGR02193 heptsyl_trn_I lipopo 74.5 28 0.0006 38.0 11.4 99 569-692 179-279 (319)
187 PLN02207 UDP-glycosyltransfera 73.2 1.5E+02 0.0032 34.8 17.4 79 638-726 332-424 (468)
188 COG0859 RfaF ADP-heptose:LPS h 72.5 29 0.00062 38.6 11.0 98 570-692 176-276 (334)
189 KOG1192 UDP-glucuronosyl and U 70.4 1E+02 0.0023 35.6 15.6 143 569-744 277-434 (496)
190 PF01975 SurE: Survival protei 68.8 34 0.00074 35.2 9.7 38 277-340 1-38 (196)
191 PRK10964 ADP-heptose:LPS hepto 68.4 47 0.001 36.4 11.5 96 572-692 181-278 (322)
192 PF04413 Glycos_transf_N: 3-De 67.1 28 0.00061 35.4 8.7 69 405-488 95-165 (186)
193 PF03016 Exostosin: Exostosin 66.0 15 0.00031 39.7 6.8 70 652-722 227-299 (302)
194 PF03401 TctC: Tripartite tric 65.6 96 0.0021 33.4 13.0 151 570-744 78-244 (274)
195 PF08660 Alg14: Oligosaccharid 63.8 17 0.00037 36.5 6.3 64 403-485 90-159 (170)
196 PRK00676 hemA glutamyl-tRNA re 63.2 2E+02 0.0043 32.3 14.9 125 600-747 173-305 (338)
197 PLN02534 UDP-glycosyltransfera 62.4 2E+02 0.0043 34.0 15.6 77 638-726 344-442 (491)
198 KOG4626 O-linked N-acetylgluco 61.6 94 0.002 37.3 12.2 191 559-776 750-948 (966)
199 PF04230 PS_pyruv_trans: Polys 60.8 2E+02 0.0044 29.4 15.6 94 582-693 189-283 (286)
200 PRK10916 ADP-heptose:LPS hepto 60.7 62 0.0013 35.9 10.7 99 571-692 182-286 (348)
201 PF03033 Glyco_transf_28: Glyc 56.4 6.7 0.00015 37.0 1.8 21 417-437 110-130 (139)
202 COG1703 ArgK Putative periplas 53.0 1.7E+02 0.0037 32.3 11.8 103 316-438 70-176 (323)
203 KOG1021 Acetylglucosaminyltran 49.9 1.3E+02 0.0028 35.2 11.4 96 653-754 335-433 (464)
204 PF05686 Glyco_transf_90: Glyc 49.6 43 0.00093 38.3 7.2 85 680-768 231-319 (395)
205 COG2910 Putative NADH-flavin r 49.5 16 0.00034 37.3 3.1 34 277-339 1-34 (211)
206 TIGR01470 cysG_Nterm siroheme 49.3 3.2E+02 0.0069 28.2 16.1 135 591-751 24-166 (205)
207 PRK13932 stationary phase surv 48.4 2.9E+02 0.0062 29.8 12.7 39 274-339 3-41 (257)
208 PF10933 DUF2827: Protein of u 47.7 1.8E+02 0.0038 32.8 11.2 159 561-747 180-345 (364)
209 smart00672 CAP10 Putative lipo 46.9 89 0.0019 33.5 8.7 86 679-768 161-250 (256)
210 PF15024 Glyco_transf_18: Glyc 43.2 3E+02 0.0065 32.9 12.7 155 569-767 276-456 (559)
211 TIGR00087 surE 5'/3'-nucleotid 41.6 4.1E+02 0.009 28.3 12.6 36 402-437 83-129 (244)
212 COG1647 Esterase/lipase [Gener 40.6 1.3E+02 0.0028 31.7 8.2 34 404-437 83-116 (243)
213 COG1618 Predicted nucleotide k 38.0 4.4E+02 0.0096 26.6 11.6 36 273-329 2-37 (179)
214 PF09752 DUF2048: Uncharacteri 34.8 2.9E+02 0.0064 31.1 10.5 33 404-436 173-205 (348)
215 PRK12342 hypothetical protein; 32.3 1.3E+02 0.0027 32.4 7.0 34 405-438 109-146 (254)
216 TIGR03642 cas_csx13 CRISPR-ass 32.2 1.7E+02 0.0037 28.0 7.0 101 316-428 9-116 (124)
217 PF10649 DUF2478: Protein of u 32.0 84 0.0018 31.3 5.2 42 654-695 85-132 (159)
218 COG4195 Phage-related replicat 31.9 54 0.0012 33.3 3.7 62 243-321 7-68 (208)
219 PRK13935 stationary phase surv 31.3 6.2E+02 0.014 27.2 12.0 34 403-436 84-128 (253)
220 PRK13933 stationary phase surv 31.3 6.3E+02 0.014 27.1 12.0 35 402-436 84-129 (253)
221 COG0569 TrkA K+ transport syst 30.9 2.7E+02 0.0058 29.1 9.1 33 404-436 65-101 (225)
222 PRK09213 pur operon repressor; 30.4 4.7E+02 0.01 28.4 11.0 33 404-436 129-161 (271)
223 PRK03359 putative electron tra 30.1 1.7E+02 0.0037 31.4 7.6 33 405-437 112-148 (256)
224 PLN00016 RNA-binding protein; 29.7 48 0.001 37.2 3.5 20 316-339 71-90 (378)
225 PLN03228 methylthioalkylmalate 29.7 9.8E+02 0.021 28.4 14.3 110 131-257 18-144 (503)
226 PF08672 APC2: Anaphase promot 29.4 31 0.00068 28.5 1.4 36 5-40 13-51 (60)
227 TIGR00715 precor6x_red precorr 29.0 2.9E+02 0.0063 29.7 9.1 53 663-723 198-252 (256)
228 PRK06988 putative formyltransf 28.5 2.8E+02 0.006 30.6 9.1 14 316-329 16-29 (312)
229 PF05728 UPF0227: Uncharacteri 28.3 4.6E+02 0.0099 26.7 10.0 31 408-438 61-91 (187)
230 PRK05331 putative phosphate ac 28.3 5E+02 0.011 29.0 11.1 44 561-609 169-212 (334)
231 CHL00200 trpA tryptophan synth 27.6 8E+02 0.017 26.4 14.1 122 569-711 91-231 (263)
232 TIGR02990 ectoine_eutA ectoine 27.5 3.3E+02 0.0072 28.9 9.1 34 403-436 179-214 (239)
233 PRK04531 acetylglutamate kinas 26.6 1.7E+02 0.0038 33.5 7.3 73 568-660 35-108 (398)
234 COG2236 Predicted phosphoribos 26.2 1.4E+02 0.003 30.7 5.7 50 383-433 8-57 (192)
235 TIGR00732 dprA DNA protecting 24.9 4.1E+02 0.0089 27.8 9.2 124 582-719 82-217 (220)
236 PRK04020 rps2P 30S ribosomal p 24.8 4.8E+02 0.01 27.1 9.4 104 580-701 47-153 (204)
237 TIGR01012 Sa_S2_E_A ribosomal 24.7 1.8E+02 0.0038 30.1 6.2 104 580-701 41-147 (196)
238 PRK13398 3-deoxy-7-phosphohept 24.5 9.1E+02 0.02 26.0 12.2 111 573-694 28-142 (266)
239 COG2204 AtoC Response regulato 24.1 9.4E+02 0.02 28.3 12.6 108 602-727 5-121 (464)
240 PLN02670 transferase, transfer 24.1 6.2E+02 0.013 29.7 11.3 105 316-433 25-136 (472)
241 cd01020 TroA_b Metal binding p 24.0 3.9E+02 0.0085 28.5 9.1 90 655-749 46-136 (264)
242 TIGR01568 A_thal_3678 uncharac 23.7 1.3E+02 0.0027 25.6 4.0 50 220-270 7-58 (66)
243 PRK10840 transcriptional regul 23.5 7.6E+02 0.016 24.8 12.6 109 602-726 4-124 (216)
244 PLN02657 3,8-divinyl protochlo 23.5 71 0.0015 36.3 3.5 52 259-339 43-94 (390)
245 KOG0780 Signal recognition par 23.1 1.2E+03 0.026 26.9 16.0 176 573-766 157-342 (483)
246 TIGR01278 DPOR_BchB light-inde 22.3 1.2E+03 0.027 27.4 13.6 62 622-691 175-238 (511)
247 COG3171 Uncharacterized protei 22.2 79 0.0017 29.5 2.7 33 230-262 25-61 (119)
248 KOG0832 Mitochondrial/chloropl 21.7 9.5E+02 0.021 25.5 10.7 37 664-701 175-212 (251)
249 COG0373 HemA Glutamyl-tRNA red 21.6 1.3E+03 0.028 26.7 17.8 127 602-769 203-335 (414)
250 PRK02122 glucosamine-6-phospha 21.5 83 0.0018 38.4 3.6 43 273-338 366-408 (652)
251 PF13407 Peripla_BP_4: Peripla 21.2 5E+02 0.011 26.6 9.2 38 658-695 51-89 (257)
252 PRK05331 putative phosphate ac 21.1 1.1E+03 0.024 26.3 12.1 52 579-644 9-61 (334)
253 PF04844 Ovate: Transcriptiona 20.9 1.4E+02 0.0031 24.7 3.7 48 221-270 2-51 (59)
254 cd02071 MM_CoA_mut_B12_BD meth 20.4 6.6E+02 0.014 23.3 8.8 60 583-660 62-121 (122)
255 cd06533 Glyco_transf_WecG_TagA 20.3 8.5E+02 0.018 24.1 10.2 133 580-735 27-166 (171)
256 COG1618 Predicted nucleotide k 20.1 2.3E+02 0.0049 28.7 5.6 71 654-726 93-175 (179)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=1e-199 Score=1739.24 Aligned_cols=805 Identities=78% Similarity=1.265 Sum_probs=780.1
Q ss_pred CcccccccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhh--HhhhcccCCCcHHHHHhhcceee
Q 003655 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAI 78 (805)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (805)
|++++|+|++||+|+++++|++|||+|++||+||+++||++|++|||+++|+++. +.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 5668999999999999999999999999999999999999999999999999994 44577899999999999999999
Q ss_pred EcCCeEEEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCcCCCCceeeeeccccccCCCCCCCCCCCCchhh
Q 003655 79 VLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVE 158 (805)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (805)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+|+||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhHhhhhhhcCCCCCcchHHHHHhhcccCCeeeecccCCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCccc
Q 003655 159 FLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLER 238 (805)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (805)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCcHHHHHHHHHHHHHhhcCCCcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHH
Q 003655 239 GWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEML 318 (805)
Q Consensus 239 gw~~~~~r~~~~~~~l~~~~~~p~~~~~~~f~~~~p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa 318 (805)
||||||+||+|||++|+|+|++|||++||+|++||||+|||+|||+||+|+|.+++|.||||||++||+|||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHH
Q 003655 319 LRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEI 398 (805)
Q Consensus 319 ~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i 398 (805)
++|+++||+|+|+|+|+||.+++..|++|++++|.+.++++++|+|+||++.++++++|++|+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEe
Q 003655 399 AKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (805)
Q Consensus 399 ~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 478 (805)
.++.+++||+||+|||+++++|.++++++|||+|+|+|++++.|+..++.+|+..++.|+|++++++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 88777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhh
Q 003655 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 479 ~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 558 (805)
+|.++++++++.++||++|.+|+||++|++++||+++++|++|||||+|...|.|+....++.+.+++.|++++|++.+.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888889999999999999999
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCC-CCCccHHHHHHHHHHHHHHHhcCCC
Q 003655 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQYKLN 637 (805)
Q Consensus 559 ~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~-~~~~d~ee~~e~~~l~~li~~~~L~ 637 (805)
++++|++.++++|+|+++||+++.||++.|++|++++.+.+++++|+|||++.+ ..+.+.++.+++++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 999998878889999999999999999999999999988778899999999843 4455677777888999999999999
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~ 717 (805)
++|+|+|.+.+..+.+++++++++++|+||+||.+|+||++++||||||+|||||+.||+.|+|.+|++|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999999768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhchhhhhchhhHHhhhhHHHHHHhhhhhhhh
Q 003655 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLA 797 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~~~w~~~~~~~~~~~~~y~~~~~~~~~~~~~ 797 (805)
+|++|.+++++|+.||+.|++|+++|++++.++|||+.++++++++..+||||++++|++|++++|||||||+||||+||
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 801 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELA 801 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHh
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccCC
Q 003655 798 ESVPLAVE 805 (805)
Q Consensus 798 ~~~~~~~~ 805 (805)
++||+++|
T Consensus 802 ~~~~~~~~ 809 (815)
T PLN00142 802 KTVPLAVD 809 (815)
T ss_pred hcCCcccc
Confidence 99999976
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=1.1e-192 Score=1680.60 Aligned_cols=780 Identities=74% Similarity=1.213 Sum_probs=754.6
Q ss_pred HHHHHHHHHHHHhcCCCccchhHHHHHHHhhh--HhhhcccCCCcHHHHHhhcceeeEcCCeEEEEEcCCCceEEEEEEe
Q 003655 24 RNEILALLSRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVN 101 (805)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (805)
|++|++||+||+++||++||+|||+++|++++ +.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 68999999999999999999999999999995 3346689999999999999999999999999999999999999999
Q ss_pred cCcceeeecCHHHHhhhcccccCCcCCCCceeeeeccccccCCCCCCCCCCCCchhhhhhHhhhhhhcCCCCCcchHHHH
Q 003655 102 VHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181 (805)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (805)
++||+||+|||+|||+|||+|||++.+++++|||||+|||++||+||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccCCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCC
Q 003655 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAP 261 (805)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p 261 (805)
||.|+|+|++|||||||+|+.+||++|++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCC
Q 003655 262 DPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPD 341 (805)
Q Consensus 262 ~~~~~~~f~~~~p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~ 341 (805)
||++||+|++||||+|||+|||+||+|+|.+++|.||||||++||+||||+||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccceeeecCccCeEEEEeccccCCc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003655 342 AVGTTCGQRLEKVYGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420 (805)
Q Consensus 342 ~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~-~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva 420 (805)
..++.|+++++.+.++++++|+|+|+++..+ ++++|++++++|||+..|+.++.+.+.++.+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 9999999999999999999999999999877 799999999999999999999999998877789999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhcccccccccccccc
Q 003655 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAF 500 (805)
Q Consensus 421 ~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f 500 (805)
.++++++|+|+|+|+|++++.|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeecc
Q 003655 501 TLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLD 580 (805)
Q Consensus 501 ~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~ 580 (805)
|||++|++++||+++++|++|||||+|++.|+|+....++....++.++.++|++++.++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888899999999999999999998888999999999999
Q ss_pred CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCC-CCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHH
Q 003655 581 RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 659 (805)
Q Consensus 581 ~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~-~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~i 659 (805)
+.||++.|++|+++++++.++++|+|||++.+ ..+.|.++.+++++++++++++++.++|+|+|.+.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999887777899999999865 55677888889999999999999999999999877677888999999
Q ss_pred HccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHH
Q 003655 660 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 739 (805)
Q Consensus 660 a~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~m 739 (805)
++++|+||+||++|+||++++||||||+|||||++||+.|+|.+|++|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhchhhhhchhhHHhhhhHHHHHHhhhhhhhhccCCcc
Q 003655 740 SLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 803 (805)
Q Consensus 740 s~~ar~~v~e~ysw~~~a~rll~Ly~~~~~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 803 (805)
+++|++++.++|||+.++++++++..+||||++++|++|++++|||||||+|||||||++||++
T Consensus 721 s~~a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=3.2e-171 Score=1393.37 Aligned_cols=548 Identities=72% Similarity=1.186 Sum_probs=472.6
Q ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhhHhhhc--ccCCCcHHHHHhhcceeeEcCCeE
Q 003655 7 TRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK--HLTEGAFGEVLRATQEAIVLPPWV 84 (805)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 84 (805)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++++++++ +..+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 699999999999999999999999999999999999999999999999876655 557899999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCcCCCCceeeeeccccccCCCCCCCCCCCCchhhhhhHhh
Q 003655 85 ALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHL 164 (805)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (805)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCcchHHHHHhhcccCCeeeecccCCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCcCCcH
Q 003655 165 SAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTA 244 (805)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~~~ 244 (805)
|||||+|++++++||||||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHC
Q 003655 245 ERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ 324 (805)
Q Consensus 245 ~r~~~~~~~l~~~~~~p~~~~~~~f~~~~p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~ 324 (805)
+||+|||++|+|+|+||||++||+|++||||+|+||++||||||+|+||+|+||||||++||+|||||||++|..+++.+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCC
Q 003655 325 GLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQG 404 (805)
Q Consensus 325 Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~ 404 (805)
|.+|.|+|+|+||.+|++.|++|++++|++.+++|++|+|+||++.+|++++|++|+++|||++.|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHH
Q 003655 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 405 kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
+||+||+||++||++|+++++++|+|+|+|+|+++++||+.++++|++++.+|||+|||+||.++|++||+|||||+|++
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcc
Q 003655 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYS 554 (805)
Q Consensus 485 ~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~ 554 (805)
++.++.+|||++|++||||||||+++||++|+|||+|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 4
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=8.7e-59 Score=555.79 Aligned_cols=454 Identities=27% Similarity=0.471 Sum_probs=355.3
Q ss_pred cceEEEEcccccccccCc-CC-CCCcccccchhHHHHHHHHHHHHHHHHHCC--CccccceeEEeCCCCCC-CCCccccc
Q 003655 276 VFNVVILTPHGYFAQDDV-LG-YPDTGGQVVYILDQVRALEDEMLLRIKQQG--LDITPQILIITRLLPDA-VGTTCGQR 350 (805)
Q Consensus 276 ~~rI~iis~h~~~~~~~~-lg-~pdtGG~~vyvld~araL~~eLa~~L~~~G--h~V~~~I~VvT~~~~~~-~g~~~~~~ 350 (805)
.|.|++||+||+|+.+++ +| .+|||||.+||+ +|+++|++.| |+|+ |+||.+.++ .+..|.+.
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 588999999999998887 88 599999999999 5555567888 7899 999997643 34556666
Q ss_pred eeee------------cCccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHH-------Hc----CCCce
Q 003655 351 LEKV------------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAK-------EL----QGKPD 407 (805)
Q Consensus 351 ~e~i------------~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~-------~l----~~kPD 407 (805)
.|.+ ...+|++|+|+|+++.. +++++..+|+|+..|+..+...+.+ ++ ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5433 34469999999998753 3677899999999999998877653 11 12499
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCC----CChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003655 408 LIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYP----DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 408 lIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~----~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
+||+|||+++.+|.++++.+++|+|+|.|++...++. .....+......|++..++.+|..++..||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999776643 233355667778999999999999999999999999999
Q ss_pred Hhhccccccccccccccccccceee-----eccCCC---CCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcch
Q 003655 484 IAGSKDTVGQYESHTAFTLPGLYRV-----VHGIDV---FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSD 555 (805)
Q Consensus 484 ~~~~~~~vgqY~~~~~f~~p~l~~~-----~~gI~~---~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~ 555 (805)
++. ||..|.+|. |.++++ .+|+.. +.+|+.|||||||++.|.|......+... ..+.....+
T Consensus 393 ~~e------q~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IEE------QWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HHH------HHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 873 555555555 544443 334442 46799999999999999986432211000 000000000
Q ss_pred hh----hhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC--CeEEEEEeCCCCCCCccHHHHHHHHHHHH
Q 003655 556 VE----NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYS 629 (805)
Q Consensus 556 ~~----~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~--~v~LvIVG~g~~~~~~d~ee~~e~~~l~~ 629 (805)
.. .-..++. ++++|+|+++||+++.||++.|++||+.+++..+ ++. +|+|++++..........+..++.+
T Consensus 463 ~~~~~~~l~r~~~--~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~ 539 (1050)
T TIGR02468 463 DPPIWSEIMRFFT--NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLK 539 (1050)
T ss_pred cchhhHHHHhhcc--cCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHH
Confidence 00 0012222 6789999999999999999999999999875433 444 4678765421111112345677889
Q ss_pred HHHhcCCCCcEEEecCCCCcCChHHHHHHHHcc---CcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCce
Q 003655 630 LIDQYKLNGQFRWISSQMNRVRNGELYRYICDT---KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKS 706 (805)
Q Consensus 630 li~~~~L~~~V~flG~~~~~v~~~el~~~ia~a---aDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~ 706 (805)
+++++++.++|.|+| +++.+++..+|+.+ +|+||+||++|+||++++||||||+|||||+.||+.|+|.++.+
T Consensus 540 li~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~n 615 (1050)
T TIGR02468 540 LIDKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDN 615 (1050)
T ss_pred HHHHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCc
Confidence 999999999999999 77778898888752 27999999999999999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 707 GYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 707 G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
|++++|.|++++|++|.+++ +|++.|++|+++|++++ ++|||+.++++|++.+...
T Consensus 616 GlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 616 GLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred EEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 99999999999999996655 89999999999999998 5799999999999988765
No 5
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=7.2e-60 Score=525.49 Aligned_cols=494 Identities=41% Similarity=0.644 Sum_probs=435.1
Q ss_pred ecccCCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCCCcccHhHHhcc
Q 003655 193 MLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGR 272 (805)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p~~~~~~~f~~~ 272 (805)
|.||++++...+|+.+.+|+..++.. .+||+..|.+.+++.++++|||.++.+|..++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999888
Q ss_pred CCCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccee
Q 003655 273 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLE 352 (805)
Q Consensus 273 ~p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e 352 (805)
++. ++|.||+||+++|+++++++|+.++..+..+++.+++++|.+++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 455 8999999999999999999999999999999999999999999999988876 4556
Q ss_pred eecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003655 353 KVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (805)
Q Consensus 353 ~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v 432 (805)
...++.+++|+++|+ +++.+|+ +.+|+++..|+ .+...+.+++++ ||++|.++++.+..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~----~~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPF----GILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEecc----chhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 667778899999999 4566777 88999999998 566788888777 999999999999999999999999999
Q ss_pred EEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhcccccccccccccccccc-ceeeecc
Q 003655 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPG-LYRVVHG 511 (805)
Q Consensus 433 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~-l~~~~~g 511 (805)
.+.|.++..+++..+.+|+.+...|+++++|.++...++++| ++++++++++.....+||+++..|++|+ .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999999 8899999
Q ss_pred CCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHH
Q 003655 512 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEW 591 (805)
Q Consensus 512 I~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA 591 (805)
++++.++++++++|.|.+.+.|.-.. ++.. + +.
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~------~~~~----------------i--~~----------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTL------LHDS----------------I--PE----------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHh------hhcc----------------c--CC-----------------------
Confidence 99999999999999998887762111 1100 0 00
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC
Q 003655 592 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 671 (805)
Q Consensus 592 ~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~ 671 (805)
...++.+++++|+. ..++.+.|+.+++++|+++++++++.++++|.-. ..+..+.|++++++..+|++|+.
T Consensus 305 -----~~~~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa~ 375 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPAN 375 (495)
T ss_pred -----CCCCceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCCC
Confidence 11245667777732 1346788999999999999999999755555532 33446679999998899999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhC
Q 003655 672 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKY 751 (805)
Q Consensus 672 ~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~y 751 (805)
|.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.+ ....+.+++.+|..||++|.+|+++|+++|++.|
T Consensus 376 -E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e-~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~f 452 (495)
T KOG0853|consen 376 -EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQE-AVAELADALLKLRRDPELWARMGKNGLKRVKEMF 452 (495)
T ss_pred -CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 444 3333334446777999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhchhhhhchhhHHhhhhHHHHHHhhhhh
Q 003655 752 TWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYR 794 (805)
Q Consensus 752 sw~~~a~rll~Ly~~~~~w~~~~~~~~~~~~~y~~~~~~~~~~ 794 (805)
||+.+.+++.++...|.+|+.++...+...+||++|||.|+||
T Consensus 453 s~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 453 SWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred hHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999986
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=1.3e-51 Score=470.50 Aligned_cols=426 Identities=31% Similarity=0.562 Sum_probs=317.5
Q ss_pred ceEEEEcccccccccC-cCC-CCCcccccchhHHHHHHHHHHHHHHHHHCCC--ccccceeEEeCCCCCCC-CCccccce
Q 003655 277 FNVVILTPHGYFAQDD-VLG-YPDTGGQVVYILDQVRALEDEMLLRIKQQGL--DITPQILIITRLLPDAV-GTTCGQRL 351 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~-~lg-~pdtGG~~vyvld~araL~~eLa~~L~~~Gh--~V~~~I~VvT~~~~~~~-g~~~~~~~ 351 (805)
++|+++|+||+|+|.+ ++| .|+.||+++|+. +|+++|+++|| +|+ |+|+..++.. ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4799999999999998 677 599999999999 67777799997 899 9998765431 12333333
Q ss_pred eeecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003655 352 EKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ 431 (805)
Q Consensus 352 e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~ 431 (805)
+.+ ..|+.++|+|+.+. .+.++...++++..|...+.+.+.+. ..+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 35789999998643 23445667888877776666555432 34799999999888899999999999999
Q ss_pred EEEecCCCcccCC---CChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceee
Q 003655 432 CTIAHALEKTKYP---DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRV 508 (805)
Q Consensus 432 v~t~H~l~~~k~~---~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~ 508 (805)
|+|.|+....+.. .....+..+...|.+......++.+++.+|.||++|.+++... +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~------------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQ------------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHH------------------HHh
Confidence 9999986432210 0111122222234444454567889999999999997654411 111
Q ss_pred eccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHH
Q 003655 509 VHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGL 588 (805)
Q Consensus 509 ~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~L 588 (805)
..+++ +.|+.+||||+|.+.|.|........ .+ ....+.++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~-----~~-------~~~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETS-----EI-------DNLLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccch-----hH-------HHHHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 11343 67999999999999987753221100 00 000122333 5667899999999999999999
Q ss_pred HHHHHHhHccCCCeEEE-EEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHcc---Cc
Q 003655 589 VEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT---KG 664 (805)
Q Consensus 589 leA~~~l~~~~~~v~Lv-IVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~a---aD 664 (805)
++|++.+....+..+++ |+|+|++............+++.++++++++.++|+|+| .++.+++..+|+.+ +|
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~D 342 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSRG 342 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcCC
Confidence 99998754332334454 567776532222223344566778899999999999999 67778999988852 29
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003655 665 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 665 vfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +||+.+++|+++|+
T Consensus 343 v~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 343 IFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRNGI 418 (439)
T ss_pred EEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999996665 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHH
Q 003655 745 KRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 745 ~~v~e~ysw~~~a~rll~Ly 764 (805)
+++.++|||+.++++|+++.
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999875
No 7
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.2e-46 Score=439.20 Aligned_cols=515 Identities=17% Similarity=0.199 Sum_probs=367.6
Q ss_pred CCHHHHHHHHHHHHHHhhcCCCCCC--------chHHHHHhhhcCcccCcCCcHHHHHHHH---------HHHHHhhcCC
Q 003655 199 QNLNSLQHVLRKAEEYLTTVVPETP--------FSELALRFQEIGLERGWGDTAERALEMI---------QLLLDLLEAP 261 (805)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~gw~~~~~r~~~~~---------~~l~~~~~~p 261 (805)
++++.+|+.|.+..+.-++...+.| |+++..++++|=+++-.+.+.+..+..| ....++.+.+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~~~ 462 (977)
T PLN02939 383 ESIKEFQDTLSKLKEESKKRSLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKN 462 (977)
T ss_pred HHHHHHHHHHHHHHhhhhcccccCchhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhcCc
Confidence 4788899999999999999888888 9999999999999999999999998888 4778889999
Q ss_pred CcccHhHHhccC----CCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeC
Q 003655 262 DPCTLETFLGRI----PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITR 337 (805)
Q Consensus 262 ~~~~~~~f~~~~----p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~ 337 (805)
|.+.++.|+.-. .+.|||++||.--.| ...+||..-++- .|.++|+++||+|. |+++
T Consensus 463 ~~~~~~~~~~~~~~~~~~~mkILfVasE~aP-------~aKtGGLaDVv~--------sLPkAL~~~GhdV~----VIlP 523 (977)
T PLN02939 463 EREAVENFLKLTLSGTSSGLHIVHIAAEMAP-------VAKVGGLADVVS--------GLGKALQKKGHLVE----IVLP 523 (977)
T ss_pred hHHHHHHHHHhccCCCCCCCEEEEEEccccc-------ccccccHHHHHH--------HHHHHHHHcCCeEE----EEeC
Confidence 999998888522 245999999976653 356899999999 66777799999999 9998
Q ss_pred CCCCCCCCccc-c-----cee-eecC-----------ccCeEEEEeccccCCcccccccccccchhh---HHH--HHHHH
Q 003655 338 LLPDAVGTTCG-Q-----RLE-KVYG-----------TKYSDILRVPFRTEKGVVRKWISRFEVWPY---LET--YTEDV 394 (805)
Q Consensus 338 ~~~~~~g~~~~-~-----~~e-~i~~-----------~~~v~I~rvp~~~~~~~~~~~isr~~i~~~---l~~--f~~~~ 394 (805)
.++........ . ... .+.+ .+|+.++.+...... .+..+..++.+ .++ |...+
T Consensus 524 ~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~RF~~FsrA 599 (977)
T PLN02939 524 KYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFKRFSYFSRA 599 (977)
T ss_pred CCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHHHHHHHHHH
Confidence 87533200000 0 000 0100 123333333210000 01112222211 122 23334
Q ss_pred HHHHHHHcCCCceEEEEcCCCchHHHHHHHHH------cCCcEEEEecCCCcccCCC-Chh-----hhhhcc--ccc--c
Q 003655 395 AVEIAKELQGKPDLIIGNYSDGNIVASLLAHK------LGVTQCTIAHALEKTKYPD-SDI-----YWKNLD--DKY--H 458 (805)
Q Consensus 395 ~~~i~~~l~~kPDlIh~h~~~~~lva~llar~------lgip~v~t~H~l~~~k~~~-s~~-----~~~~~~--~~y--~ 458 (805)
.-++....+.+|||||||.|..++++.++.+. .++|.|+|+|++.....-. ... .+..+. ... .
T Consensus 600 aLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~ 679 (977)
T PLN02939 600 ALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDN 679 (977)
T ss_pred HHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhc
Confidence 44455555679999999999998886655542 3579999999986544221 111 111110 000 1
Q ss_pred cchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHH
Q 003655 459 FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK 538 (805)
Q Consensus 459 f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~ 538 (805)
+..++..-+.++..||.|+|+|+..+..+... +.++ +.+. +.....|+.+|+||||.+.|.|.++..
T Consensus 680 ~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te-~G~G------L~~~------L~~~~~Kl~gIlNGID~e~wnPatD~~ 746 (977)
T PLN02939 680 AHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE-GGRG------LQDT------LKFHSKKFVGILNGIDTDTWNPSTDRF 746 (977)
T ss_pred cCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH-hccc------hHHH------hccccCCceEEecceehhhcCCccccc
Confidence 12222233346668999999999988765431 1111 1110 122267999999999999999976421
Q ss_pred HhhhcCchhhHHhhcchhhhhhhhccccC-CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCcc
Q 003655 539 RRLKSFHPEIEELLYSDVENKEHLCVLKD-RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD 617 (805)
Q Consensus 539 ~rl~~~~~~i~~~l~~~~~~~~~lG~l~~-~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d 617 (805)
-....-...++....++...++++|+..+ ++.|+|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|+..
T Consensus 747 L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGdGp~~---- 820 (977)
T PLN02939 747 LKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGSSPVP---- 820 (977)
T ss_pred cccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeCCCcH----
Confidence 00000012233333445667888999532 467999999999999999999999998765 47899999999752
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003655 618 LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 697 (805)
Q Consensus 618 ~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~ 697 (805)
...+.++++++++++.++|.|+| ..+......+|+. +|+||+||.+|+||++++|||+||+|+|++++||.
T Consensus 821 ----~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYAa-ADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL 891 (977)
T PLN02939 821 ----HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYAA-SDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL 891 (977)
T ss_pred ----HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHHh-CCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC
Confidence 33567889999999999999999 5566667788884 99999999999999999999999999999999999
Q ss_pred cccccc---------CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 698 AEIIVN---------GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 698 ~EiI~d---------g~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
.|+|.+ +.+||+++++|+++++++|.+++..+..||+.|++|++++. .++|||+.++++|+++|+..
T Consensus 892 ~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~qYeeLY~~l 967 (977)
T PLN02939 892 NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQYEELYQRA 967 (977)
T ss_pred cceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHH
Confidence 999975 57999999999999999999888666679999999998765 36899999999999998643
No 8
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=2e-43 Score=405.99 Aligned_cols=427 Identities=17% Similarity=0.222 Sum_probs=291.0
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCc-cccceeee-
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT-CGQRLEKV- 354 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~-~~~~~e~i- 354 (805)
|||++||.+.+|- ..+||+..+|. .|+++|+++||+|+ |+|+.++...... -......+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998743 34899999999 66777799999999 9998765432110 00011111
Q ss_pred --------cCccCeEEEEeccccCCcccccccccccchhhH---HHH--HHHHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 003655 355 --------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYL---ETY--TEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421 (805)
Q Consensus 355 --------~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l---~~f--~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~ 421 (805)
...+|+++++++.... ..+..++.+. ++| ...+..++...++.+|||||+|+|.+++++.
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~ 134 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPA 134 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHH
Confidence 1124677777764221 1111222221 222 2223334444455699999999999999988
Q ss_pred HHHHHc-----CCcEEEEecCCCcccCCCC-hhhh-----hhc-ccccccchhhhHhHHHhhcCCEEEecCHHHHhhccc
Q 003655 422 LLAHKL-----GVTQCTIAHALEKTKYPDS-DIYW-----KNL-DDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKD 489 (805)
Q Consensus 422 llar~l-----gip~v~t~H~l~~~k~~~s-~~~~-----~~~-~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~ 489 (805)
++++.+ ++|+|+|+|++........ ...+ ..+ .....+...+...+.++..||.|+|+|+...+.+..
T Consensus 135 ~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~ 214 (466)
T PRK00654 135 LLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITT 214 (466)
T ss_pred HHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhcc
Confidence 888763 7999999999754321110 0000 000 011111112333456789999999999987765433
Q ss_pred cccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCc-hhhHHhhcchhhhhhhhccccCC
Q 003655 490 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFH-PEIEELLYSDVENKEHLCVLKDR 568 (805)
Q Consensus 490 ~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~-~~i~~~l~~~~~~~~~lG~l~~~ 568 (805)
....|+ +.+. +.....|+.+||||||.+.|.|..+..-.. .+. ..++....++...++++|+. ++
T Consensus 215 ~~~~~g------l~~~------~~~~~~ki~vI~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 215 PEFGYG------LEGL------LRARSGKLSGILNGIDYDIWNPETDPLLAA-NYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred ccCCcC------hHHH------HHhcccCceEecCCCCccccCCccCccccc-ccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 210000 0000 011156899999999999998865321000 000 01111112234456778884 34
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE-ecCCC
Q 003655 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW-ISSQM 647 (805)
Q Consensus 569 ~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f-lG~~~ 647 (805)
+.++|+++||+.+.||++.+++|++++.+. +++|+|+|+|+. ...+++++++++++ +++.+ .|
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~---------~~~~~l~~l~~~~~--~~v~~~~g--- 344 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP---------ELEEAFRALAARYP--GKVGVQIG--- 344 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH---------HHHHHHHHHHHHCC--CcEEEEEe---
Confidence 789999999999999999999999998763 799999999853 34567888888886 45665 45
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHHHH
Q 003655 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQAAEI 721 (805)
Q Consensus 648 ~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg------~~G~l~~p~d~e~lA~a 721 (805)
.+.+.+..+++ ++|++|+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|+++++++
T Consensus 345 --~~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~ 421 (466)
T PRK00654 345 --YDEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRA 421 (466)
T ss_pred --CCHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHH
Confidence 23344567777 5999999999999999999999999999999999999999988 89999999999999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 722 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 722 I~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
|.+++. +..|++.|++|++++++ ++|||+.++++|+++|+.
T Consensus 422 i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 422 LRRALE-LYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 988763 33578889999988864 689999999999999974
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=8.1e-43 Score=392.25 Aligned_cols=399 Identities=21% Similarity=0.293 Sum_probs=298.1
Q ss_pred EEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCcc
Q 003655 279 VVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 358 (805)
Q Consensus 279 I~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~ 358 (805)
|++++.|+.|.. +++..+.||.++|+. +|+++|+++||+|+ |+|.......+. . ....+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~---~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP----V---VEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC----c---cccCC
Confidence 578888887542 345556799999999 77777899999999 999764322111 1 11224
Q ss_pred CeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003655 359 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 359 ~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l 438 (805)
++++.+++..+..+ .....+..++..|.....+.++.....+||+||+|.+.+++.+.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 68888887654321 1111122222334434444444433458999999998888888888999999999999986
Q ss_pred CcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCc
Q 003655 439 EKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 518 (805)
Q Consensus 439 ~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~k 518 (805)
...+ ..++...... ........+...++.+|.|+++|+...+.+.+. .|.+ ..|
T Consensus 135 ~~~~----~~~~~~~~~~-~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVK----NAALADGDTP-EPEARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHH----HHhccCCCCC-chHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 4211 0011000000 001112235567899999999998766532221 1232 568
Q ss_pred EEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHcc
Q 003655 519 FNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKL 598 (805)
Q Consensus 519 i~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~ 598 (805)
+.+||||+|.+.|.|..... .+.++|+ ++++++|+++||+.+.||++.+++|++++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~-------------------~~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRAT-------------------ERARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHH-------------------HHHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 99999999998887653221 1244666 56789999999999999999999999999777
Q ss_pred CCC--eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003655 599 REL--VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 599 ~~~--v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fG 676 (805)
.++ ++|+|+|++.... ..+.++++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+||
T Consensus 248 ~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~g 316 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESFG 316 (405)
T ss_pred CCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCcC
Confidence 776 9999999753210 023467888899999999999999 7788999999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003655 677 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIY 756 (805)
Q Consensus 677 ltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~ 756 (805)
++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.+
T Consensus 317 ~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~~ 391 (405)
T TIGR03449 317 LVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAAT 391 (405)
T ss_pred hHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999999999999999999999999997766 79999999999999987 78999999
Q ss_pred HHHHHHHHHH
Q 003655 757 SQRLLTLTGV 766 (805)
Q Consensus 757 a~rll~Ly~~ 766 (805)
+++++++|..
T Consensus 392 ~~~~~~~y~~ 401 (405)
T TIGR03449 392 ADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=4.8e-42 Score=395.31 Aligned_cols=434 Identities=16% Similarity=0.192 Sum_probs=295.9
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccc-----ce
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQ-----RL 351 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~-----~~ 351 (805)
|||+++|+..+|- -.+||+..++- .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999997642 34899999999 66667799999999 9998765432110000 00
Q ss_pred e--------e----ecCccCeEEEEeccccCCcccccc--ccc---ccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCC
Q 003655 352 E--------K----VYGTKYSDILRVPFRTEKGVVRKW--ISR---FEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS 414 (805)
Q Consensus 352 e--------~----i~~~~~v~I~rvp~~~~~~~~~~~--isr---~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~ 414 (805)
. . ....+++.++++..... ..+. +.. .+.......|...+. ++....+.+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~---~~r~~~~y~~~~~d~~~r~~~f~~a~~-~~~~~~~~~~DiiH~hdw 137 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSL---FDRPGGIYGDDYPDNAERFAFFSRAAA-ELLSGLGWQPDVVHAHDW 137 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHH---cCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHHhcCCCCCEEEECCc
Confidence 0 0 01113566666543210 0000 110 011111122333333 333434578999999999
Q ss_pred CchHHHHHHHHHcC---CcEEEEecCCCcccC-CCChhhh-----hhcc-cccccchhhhHhHHHhhcCCEEEecCHHHH
Q 003655 415 DGNIVASLLAHKLG---VTQCTIAHALEKTKY-PDSDIYW-----KNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 415 ~~~lva~llar~lg---ip~v~t~H~l~~~k~-~~s~~~~-----~~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
.+++++.++++..+ +|.|+|+|++..... +.....+ ..+. ..+.+...+...+.++..||.|+|+|+..+
T Consensus 138 ~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~ 217 (473)
T TIGR02095 138 HTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYA 217 (473)
T ss_pred HHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHH
Confidence 99999998988776 999999999764322 1111111 0000 111111123445678999999999999877
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhcc
Q 003655 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCV 564 (805)
Q Consensus 485 ~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~ 564 (805)
+.+......+ .+.+. +.....|+.+|+||+|.+.|.|..+..-....-....+....++...++++|+
T Consensus 218 ~ei~~~~~~~------~l~~~------l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl 285 (473)
T TIGR02095 218 REILTPEFGY------GLDGV------LKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGL 285 (473)
T ss_pred HHhcCCcCCc------cchhH------HHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCC
Confidence 6443321000 00000 01125689999999999999886432100000000011111223455678898
Q ss_pred ccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEec
Q 003655 565 LKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 565 l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG 644 (805)
..++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|+. ...+++++++++++ +++.+.+
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~l~~~~~~~~--~~v~~~~ 352 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP---------ELEEALRELAERYP--GNVRVII 352 (473)
T ss_pred CccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH---------HHHHHHHHHHHHCC--CcEEEEE
Confidence 5555889999999999999999999999998763 599999999853 33467777777664 5788887
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHH
Q 003655 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQA 718 (805)
Q Consensus 645 ~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg------~~G~l~~p~d~e~l 718 (805)
..+.+++..+++. +|++++||.+|+||++++|||+||+|+|+|+.||..|+|.++ .+|++++|.|++++
T Consensus 353 ----~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~l 427 (473)
T TIGR02095 353 ----GYDEALAHLIYAG-ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427 (473)
T ss_pred ----cCCHHHHHHHHHh-CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHH
Confidence 5566777888884 999999999999999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 719 AEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 719 A~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
+++|.+++....+||+.|++|++++++ ++|||+.++++|+++|+.
T Consensus 428 a~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 428 LAALSRALRLYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHHh
Confidence 999988775444499999999998863 689999999999999973
No 11
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=2.5e-41 Score=376.09 Aligned_cols=397 Identities=33% Similarity=0.546 Sum_probs=302.8
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+|++.|+.+.. ..|.|+.||.+.++. +|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 5889999986532 245699999999999 66667789999999 998654332111 01122
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
.++.+.+++..+.. ..++...++++..|...+.+.+.... .+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRREG-GRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhcC-CCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 46778887765421 12333456666666666666555432 3899999999888888888999999999999998
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003655 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ 517 (805)
+...........+. +........+..+++.+|.|+++|......+.... +.. ..
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-------------------~~~--~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSLY-------------------GAY--PR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHc-------------------ccc--cc
Confidence 75433221111111 11222334567789999999999988765332221 111 44
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003655 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 597 (805)
++.+||||+|.+.|.+....... +..++. .+++++|+++||+++.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEAR------------------RARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhH------------------HHhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 68999999999888665432210 122333 5678899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcH
Q 003655 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 677 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGl 677 (805)
..++++|+++|++..... ......++.+++.+++.++|.|+| .++.+++..+++. +|++++||..|+||+
T Consensus 248 ~~~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~~ 317 (398)
T cd03800 248 LRERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFGL 317 (398)
T ss_pred hCCCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccCc
Confidence 788999999999875211 112244678888999999999999 7888999999996 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003655 678 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 678 tvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a 757 (805)
+++|||+||+|||+|+.||..|+++++.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.++|||+.++
T Consensus 318 ~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~ 393 (398)
T cd03800 318 TALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERVA 393 (398)
T ss_pred HHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999999999999999999999997665 899999999999999999999999999
Q ss_pred HHHH
Q 003655 758 QRLL 761 (805)
Q Consensus 758 ~rll 761 (805)
++++
T Consensus 394 ~~~~ 397 (398)
T cd03800 394 ARLL 397 (398)
T ss_pred HHHh
Confidence 9886
No 12
>PLN02316 synthase/transferase
Probab=100.00 E-value=7.3e-41 Score=402.97 Aligned_cols=407 Identities=14% Similarity=0.094 Sum_probs=283.3
Q ss_pred cceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcc-ccce-ee
Q 003655 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTC-GQRL-EK 353 (805)
Q Consensus 276 ~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~-~~~~-e~ 353 (805)
+|||++||.+..|- -.+||+..+|. .|+++|+++||+|. |+|+.++....... .... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 59999999998743 35799999999 66667799999999 99998753210000 0000 00
Q ss_pred e-----------cCccCeEEEEeccccCCcccccccccccchhh---HHHH--HHHHHHHHHHHcCCCceEEEEcCCCch
Q 003655 354 V-----------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPY---LETY--TEDVAVEIAKELQGKPDLIIGNYSDGN 417 (805)
Q Consensus 354 i-----------~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~---l~~f--~~~~~~~i~~~l~~kPDlIh~h~~~~~ 417 (805)
+ ...+++.++.+.... ++ ..+..++.+ .++| ...+..++......+|||||||+|.++
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~~----F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~ta 721 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--GM----FWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSA 721 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--cc----cCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHH
Confidence 0 011244444443211 11 111111211 1222 222333444444578999999999998
Q ss_pred HHHHHHHHHc------CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccc
Q 003655 418 IVASLLAHKL------GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTV 491 (805)
Q Consensus 418 lva~llar~l------gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v 491 (805)
+++.++++.+ ++|+|+|+|++.... ++ -..++..||.|+|+|+..++.+...
T Consensus 722 lva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~- 779 (1036)
T PLN02316 722 PVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN- 779 (1036)
T ss_pred HHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc-
Confidence 9888887753 589999999864211 00 1246789999999999877643221
Q ss_pred cccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchh-hHHhhcchhhhhhhhccccCCCC
Q 003655 492 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPE-IEELLYSDVENKEHLCVLKDRNK 570 (805)
Q Consensus 492 gqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~-i~~~l~~~~~~~~~lG~l~~~~k 570 (805)
.++.....|+.+|+||||.+.|.|.++.......-... ++....++...++.+|+. +++.
T Consensus 780 ------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d~ 840 (1036)
T PLN02316 780 ------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QADL 840 (1036)
T ss_pred ------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-cccC
Confidence 11221246899999999999998865321000000000 011112233456778984 2478
Q ss_pred cEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCC--CCcEEEecCCCC
Q 003655 571 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL--NGQFRWISSQMN 648 (805)
Q Consensus 571 ~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L--~~~V~flG~~~~ 648 (805)
|+|+++|||.+.||++.|++|+..+.+ .+++|+|+|+|++. .....+.++++++++ +++|.|.|
T Consensus 841 plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f~g---- 906 (1036)
T PLN02316 841 PLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARLCL---- 906 (1036)
T ss_pred eEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEEEe----
Confidence 999999999999999999999999865 47999999999752 345678889998866 57899988
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------ceEEEECCCCH
Q 003655 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG-------------KSGYHIDPYHG 715 (805)
Q Consensus 649 ~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg-------------~~G~l~~p~d~ 715 (805)
..+......+|+ ++|+||+||++|+||++++|||+||+|+|++++||++|+|.++ .+||++++.|+
T Consensus 907 ~~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~ 985 (1036)
T PLN02316 907 TYDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADA 985 (1036)
T ss_pred cCCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCH
Confidence 333333346777 5999999999999999999999999999999999999999884 69999999999
Q ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 716 EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 716 e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
++++.+|.+++... ++....+++.+++.+.++|||+.++++|+++|+.
T Consensus 986 ~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 986 AGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred HHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 99999998877321 3445557777888888899999999999999964
No 13
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=1.1e-40 Score=384.72 Aligned_cols=440 Identities=16% Similarity=0.193 Sum_probs=296.6
Q ss_pred CCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCc--ccc--
Q 003655 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT--CGQ-- 349 (805)
Q Consensus 274 p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~--~~~-- 349 (805)
|| |||+++|.--.| -..|||..-++- .|.++|+++||+|. |+++.+....... ...
T Consensus 4 ~~-~~il~v~~E~~p-------~~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSP-------FVRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchh-------hcccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 999999976653 357899998888 56667799999999 9998765432210 000
Q ss_pred ceeeec-C-ccCeEEEEec--cccCCc---c-c--ccccccccch----------hhHHHHH--HHHHHHHHHHcCCCce
Q 003655 350 RLEKVY-G-TKYSDILRVP--FRTEKG---V-V--RKWISRFEVW----------PYLETYT--EDVAVEIAKELQGKPD 407 (805)
Q Consensus 350 ~~e~i~-~-~~~v~I~rvp--~~~~~~---~-~--~~~isr~~i~----------~~l~~f~--~~~~~~i~~~l~~kPD 407 (805)
....+. . .....+.++- ..+..+ + + ..+..|..++ .-.++|+ ..+..++......+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pD 143 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPD 143 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 011110 0 0011122110 000000 0 0 0011111111 1122222 2223333444456899
Q ss_pred EEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCCcccCCCChhh-----hhhcccccccchhhhHhHHHhhcCCE
Q 003655 408 LIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYPDSDIY-----WKNLDDKYHFSCQFTADLIAMNHTDF 475 (805)
Q Consensus 408 lIh~h~~~~~lva~llar~l-------gip~v~t~H~l~~~k~~~s~~~-----~~~~~~~y~f~~~~~~e~~a~~~AD~ 475 (805)
|||+|.|.+++++.+++++. ++|.|+|+|++........... +........+...+...+.++..||.
T Consensus 144 iiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~ 223 (489)
T PRK14098 144 IIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADL 223 (489)
T ss_pred EEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCc
Confidence 99999999999998888765 7999999999764432111100 00000000111123345668899999
Q ss_pred EEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcch
Q 003655 476 IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSD 555 (805)
Q Consensus 476 IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~ 555 (805)
|+|+|+..++.+.+. +.+ .+.+++..+ ....|+.+|+||||.+.|.|..+..-+..--...++...-++
T Consensus 224 VitVS~~~a~ei~~~-~~~----~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k 292 (489)
T PRK14098 224 LTTTSPRYAEEIAGD-GEE----AFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENK 292 (489)
T ss_pred ceeeCHHHHHHhCcC-CCC----CcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHH
Confidence 999999888755431 000 111111111 115689999999999999987543211000001122222234
Q ss_pred hhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcC
Q 003655 556 VENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 556 ~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~ 635 (805)
...++.+|++.+++.|+|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. .+.+.+++++++++
T Consensus 293 ~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~~ 361 (489)
T PRK14098 293 KALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK---------EYEKRFQDFAEEHP 361 (489)
T ss_pred HHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH---------HHHHHHHHHHHHCC
Confidence 456678899767789999999999999999999999999875 4799999999853 34567888888874
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CceEEEEC
Q 003655 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN----GKSGYHID 711 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~d----g~~G~l~~ 711 (805)
++|.|.| .++.+++..+++. +|+||+||.+|+||++.+|||+||+|+|++++||..|.|.+ +.+|++++
T Consensus 362 --~~V~~~g----~~~~~~~~~~~a~-aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~ 434 (489)
T PRK14098 362 --EQVSVQT----EFTDAFFHLAIAG-LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFH 434 (489)
T ss_pred --CCEEEEE----ecCHHHHHHHHHh-CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeC
Confidence 7899999 6777888999995 99999999999999999999999999999999999998864 67999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 712 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 712 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
++|+++++++|.+++ .+..|++.|+++++++. .++|||+..+++|+++|+.
T Consensus 435 ~~d~~~la~ai~~~l-~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 435 DYTPEALVAKLGEAL-ALYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred CCCHHHHHHHHHHHH-HHHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 999999999998876 35578999999988764 3789999999999999964
No 14
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.9e-40 Score=374.69 Aligned_cols=396 Identities=12% Similarity=0.104 Sum_probs=286.1
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCC---ccccceee
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT---TCGQRLEK 353 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~---~~~~~~e~ 353 (805)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+....+.+. ........
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998876 56799999999 77777899999999 999652111100 00100111
Q ss_pred ecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcE
Q 003655 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQ 431 (805)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~--~lva~llar~lgip~ 431 (805)
.....+++++|+|...... ...+. .+..+ ..|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLHL-GSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHHH-HHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123578999988642110 00000 11111 22333444444443336899999998654 456778888899999
Q ss_pred EEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003655 432 CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 511 (805)
Q Consensus 432 v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~g 511 (805)
++++|+.+........ .++. ....++. ...+..+++.||.||++|+...+.+++ .|
T Consensus 135 v~~~~d~~~~~~~~~~-~~~~-~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLG-LLKG-GKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhC-CccC-cHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 9999975431100000 0000 0000011 124677899999999999988774321 23
Q ss_pred CCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHH
Q 003655 512 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEW 591 (805)
Q Consensus 512 I~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA 591 (805)
++ ..++.+||||+|.+.|.|...... ...++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~----------------~~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADV----------------DALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccch----------------HHHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 668999999999988876532110 012344666 6678899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC
Q 003655 592 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 671 (805)
Q Consensus 592 ~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~ 671 (805)
++.+.+ .++++|+|+|+|+. .++++++++++++. +|+|+| +++.+++..+++. +|++|+||.
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps~ 312 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQK 312 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEeec
Confidence 998754 57899999999964 46788889999986 799999 7778999999995 999999999
Q ss_pred CCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 003655 672 YEA----FGLTVVEAMTCGLPTFATCKGG--PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 745 (805)
Q Consensus 672 ~E~----fGltvlEAMA~GlPVVaT~~GG--~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~ 745 (805)
.|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|+++++++|.+++ +|++.+++|+++|++
T Consensus 313 ~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~ 386 (412)
T PRK10307 313 AGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVARE 386 (412)
T ss_pred cCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHH
Confidence 998 5778999999999999998877 458886 5999999999999999996655 899999999999999
Q ss_pred HHHHhCCHHHHHHHHHHHHHH
Q 003655 746 RIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 746 ~v~e~ysw~~~a~rll~Ly~~ 766 (805)
++.++|||+.++++++++|+.
T Consensus 387 ~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 387 YAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHcCHHHHHHHHHHHHHH
Confidence 999999999999999999874
No 15
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=4.2e-40 Score=378.76 Aligned_cols=432 Identities=17% Similarity=0.181 Sum_probs=295.0
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccc--ccee---
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG--QRLE--- 352 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~--~~~e--- 352 (805)
||++||+-.+|- ..+||...++. .|+++|+++||+|. |+|+.++........ ....
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 689999876532 36899999999 66667799999999 999876543211000 0000
Q ss_pred ------------eecCccCeEEEEeccccCCccccccc--ccccchhh-H---HHHHHHHHHHHHHHcCCCceEEEEcCC
Q 003655 353 ------------KVYGTKYSDILRVPFRTEKGVVRKWI--SRFEVWPY-L---ETYTEDVAVEIAKELQGKPDLIIGNYS 414 (805)
Q Consensus 353 ------------~i~~~~~v~I~rvp~~~~~~~~~~~i--sr~~i~~~-l---~~f~~~~~~~i~~~l~~kPDlIh~h~~ 414 (805)
.....+++.++.++.....+ +.++ .....|.. . ..|...+.. ++..+..+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~l~~~~~~pDviH~hd~ 138 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAALE-LLRRLGWKPDIIHCHDW 138 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHHH-HHHhcCCCCcEEEECch
Confidence 00112356666664322110 0000 00011111 1 223333333 33333579999999999
Q ss_pred CchHHHHHHHHHc------CCcEEEEecCCCcccCCCChhh------h--hhcccccccchhhhHhHHHhhcCCEEEecC
Q 003655 415 DGNIVASLLAHKL------GVTQCTIAHALEKTKYPDSDIY------W--KNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 415 ~~~lva~llar~l------gip~v~t~H~l~~~k~~~s~~~------~--~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 480 (805)
.+++++.+++... ++|+|+|+|++........... | ......+.+...+..++.++..||.|+|+|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 9988888887764 8999999999765432111100 0 000111123334556778999999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003655 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 481 ~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 560 (805)
+...+.+.+..+.+ .+.+ .+.....|+.+|+||+|.+.|.|..+............+....++...++
T Consensus 219 ~~~~~~i~~~~~~~------gl~~------~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 219 PTYAREILTPEFGE------GLDG------LLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HhHHHHhCCCCCCc------chHH------HHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 88776543321100 0000 00111468999999999999988654321110000111222334455677
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcE
Q 003655 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 561 ~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V 640 (805)
++|+..++++++|+++||+.+.||++.+++++.++.+. +++|+|+|+|+. ...+.++++++++ .++|
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~~~~~~~~~--~~~v 353 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP---------EYEEALRELAARY--PGRV 353 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH---------HHHHHHHHHHHhC--CCcE
Confidence 88886567899999999999999999999999998764 499999999853 3346677777766 5678
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc------eEEEECCCC
Q 003655 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK------SGYHIDPYH 714 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~------~G~l~~p~d 714 (805)
.+++ ..+.+++..+++. +|++++||.+|+||++++|||+||+|||+|+.||..|+|.++. +|++++|.|
T Consensus 354 ~~~~----~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~ 428 (476)
T cd03791 354 AVLI----GYDEALAHLIYAG-ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN 428 (476)
T ss_pred EEEE----eCCHHHHHHHHHh-CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC
Confidence 8776 4455666778884 9999999999999999999999999999999999999999988 999999999
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 715 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 715 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
+++++++|.++++ ...+++.|.+|++++.+ +.|||+.++++|+++|+
T Consensus 429 ~~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 429 ADALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 9999999988763 44678999999998865 47999999999999985
No 16
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=4.8e-40 Score=370.17 Aligned_cols=365 Identities=17% Similarity=0.228 Sum_probs=272.2
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++..+ |..||.+.++. +|++.|+++||+|. |+|...++..+. . ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~----~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI----R----YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc----c----ccc
Confidence 6899987776 56799999999 77777899999999 998754322111 0 112
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEe
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGN--IVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~--lva~llar~lgip~v~t~ 435 (805)
.++.+.++|...... ...+..+ ..+...+.+.+. +.+|||||+|.+.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~~~-~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLPTF-FGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Cccccch-hhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888887653210 0011111 111112222222 348999999987653 346777888999999999
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003655 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~ 515 (805)
|+..... +... . +.. ......++++|.+|++|....+... ...+++
T Consensus 121 h~~~~~~----~~~~-~------~~~--~~~~~~~~~~d~ii~~s~~~~~~~~-------------------~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASS-I------HTN--KLLRFSLADVDHVICVSHTSKENTV-------------------LRASLD-- 166 (398)
T ss_pred ccccccc----chhh-H------Hhh--HHHHHhhccCCEEEEecHhHhhHHH-------------------HHhCCC--
Confidence 9853210 0000 0 000 1124567899999999987654110 112333
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003655 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l 595 (805)
..|+.+||||+|.+.|.|.... .++++++|+++||+.+.||++.+++|+..+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999887664321 045778999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003655 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~f 675 (805)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 219 ~~~~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~~ 282 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEAF 282 (398)
T ss_pred HhhCCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhcc
Confidence 88889999999999853 366888999999999999999 7788999999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003655 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~ 755 (805)
|++++||||||+|||+|+.||..|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+.
T Consensus 283 g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 283 CIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred CHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHHH
Confidence 999999999999999999999999998764 44454 48999999997766 5666666788999999999999999
Q ss_pred HHHHHHHHHHH
Q 003655 756 YSQRLLTLTGV 766 (805)
Q Consensus 756 ~a~rll~Ly~~ 766 (805)
++++++++|+.
T Consensus 357 ~~~~~~~~y~~ 367 (398)
T cd03796 357 VAKRTEKVYDR 367 (398)
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 17
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2.2e-39 Score=373.40 Aligned_cols=438 Identities=16% Similarity=0.166 Sum_probs=285.3
Q ss_pred cceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccc-cceeee
Q 003655 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-QRLEKV 354 (805)
Q Consensus 276 ~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~-~~~e~i 354 (805)
.|||+++|.--. +-..|||..-++- .|.++|+++||+|. |+++.+......... .....+
T Consensus 3 ~~~il~v~~E~~-------p~~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~~~~~~~~~~~ 63 (485)
T PRK14099 3 PLRVLSVASEIF-------PLIKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAGIEDAEQVHSF 63 (485)
T ss_pred CcEEEEEEeccc-------cccCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhhhcCceEEEEE
Confidence 489999986655 4467999998888 66677799999999 999876543210000 011111
Q ss_pred cCc-c-CeEEEEecccc------CCc-cc-ccc-ccc----ccchhhHHHH--HHHHHHHHHHHc--CCCceEEEEcCCC
Q 003655 355 YGT-K-YSDILRVPFRT------EKG-VV-RKW-ISR----FEVWPYLETY--TEDVAVEIAKEL--QGKPDLIIGNYSD 415 (805)
Q Consensus 355 ~~~-~-~v~I~rvp~~~------~~~-~~-~~~-isr----~~i~~~l~~f--~~~~~~~i~~~l--~~kPDlIh~h~~~ 415 (805)
... . .+++....... .++ +. +.. +.. .+...-.++| ...+.-++.... +.+|||||+|.|.
T Consensus 64 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~ 143 (485)
T PRK14099 64 PDLFGGPARLLAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQ 143 (485)
T ss_pred eeeCCceEEEEEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcH
Confidence 100 0 11222111100 000 00 000 000 0111112233 223333444332 4689999999999
Q ss_pred chHHHHHHHH--HcCCcEEEEecCCCcccCCCChh------hhhhcc-cccccchhhhHhHHHhhcCCEEEecCHHHHhh
Q 003655 416 GNIVASLLAH--KLGVTQCTIAHALEKTKYPDSDI------YWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIAG 486 (805)
Q Consensus 416 ~~lva~llar--~lgip~v~t~H~l~~~k~~~s~~------~~~~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~ 486 (805)
+++++.++.. ..++|.|+|+|++.....-.... .+..+. ....+.......+.++..||.|+|+|+..++.
T Consensus 144 ~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~e 223 (485)
T PRK14099 144 AGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALE 223 (485)
T ss_pred HHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHH
Confidence 9888877654 24689999999975433111100 010000 00011111123456889999999999988765
Q ss_pred ccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhcccc
Q 003655 487 SKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLK 566 (805)
Q Consensus 487 ~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~ 566 (805)
+.+....+ .+.+.+ .....|+.+|+||||.+.|.|.++..-....-...++....++...++++|+..
T Consensus 224 i~~~~~g~------gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~ 291 (485)
T PRK14099 224 IQGPEAGM------GLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDP 291 (485)
T ss_pred HhcccCCc------ChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCc
Confidence 43221000 000000 011568999999999999988754311000000111111223345567889854
Q ss_pred CCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcE-EEecC
Q 003655 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF-RWISS 645 (805)
Q Consensus 567 ~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V-~flG~ 645 (805)
+++.++|+++||+.+.||++.|++|+..+.+ .+++|+|+|+|+. ...+.+++++++++ +++ .|+|+
T Consensus 292 ~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~~--~~v~~~~G~ 358 (485)
T PRK14099 292 DPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA---------ELEARFRAAAQAYP--GQIGVVIGY 358 (485)
T ss_pred ccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH---------HHHHHHHHHHHHCC--CCEEEEeCC
Confidence 5678899999999999999999999998875 4689999999853 33466778887765 455 78883
Q ss_pred CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEECCCCHH
Q 003655 646 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHIDPYHGE 716 (805)
Q Consensus 646 ~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg---------~~G~l~~p~d~e 716 (805)
.+++..+|..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|++
T Consensus 359 ------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~ 432 (485)
T PRK14099 359 ------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTAD 432 (485)
T ss_pred ------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHH
Confidence 46788877435999999999999999999999999999999999999999875 689999999999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
+++++|.+++ .+++|++.|++|++++++ ++|||+.++++|+++|+..
T Consensus 433 ~La~ai~~a~-~l~~d~~~~~~l~~~~~~---~~fSw~~~a~~y~~lY~~l 479 (485)
T PRK14099 433 ALAAALRKTA-ALFADPVAWRRLQRNGMT---TDVSWRNPAQHYAALYRSL 479 (485)
T ss_pred HHHHHHHHHH-HHhcCHHHHHHHHHHhhh---hcCChHHHHHHHHHHHHHH
Confidence 9999998754 255899999999999863 6899999999999998743
No 18
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=1.1e-38 Score=355.47 Aligned_cols=378 Identities=21% Similarity=0.323 Sum_probs=274.1
Q ss_pred ceEEEEcccccccccCcCCCCC-cccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeec
Q 003655 277 FNVVILTPHGYFAQDDVLGYPD-TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pd-tGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~ 355 (805)
|||++++..+. |+ .||.+.++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987664 44 499999999 566666766 7777 66643210 1
Q ss_pred CccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003655 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 356 ~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~ 435 (805)
...++.+.+++..... ......+..+..++. ......+||+||+|.+.+++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235666666432110 011111222222211 1111247999999998877777777788899999999
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003655 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~ 515 (805)
|++........ ......+.+.. ..+..+++.+|.||++|+...+.+.+.. .+++
T Consensus 114 h~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~~------------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKE----EQLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKYY------------------PDLD-- 167 (388)
T ss_pred ecccccccccc----cccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHHc------------------CCCC--
Confidence 98743221000 00111122222 2356788999999999988766433221 1233
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003655 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l 595 (805)
..++.+||||+|.+.|.|..... .+..+|+ ++++++|+++||+.+.||++.|++|++++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNV-------------------VLDRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHH-------------------HHHHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 56899999999998887653321 1344666 67788999999999999999999999987
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCC-CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCC
Q 003655 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL-NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 674 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L-~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~ 674 (805)
. ++++++++|++++. ....+++++.+..++. .++|.|++ +.++.+++..+++. +|++|+||.+|+
T Consensus 227 ~---~~~~l~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e~ 292 (388)
T TIGR02149 227 P---KDVQVVLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYEP 292 (388)
T ss_pred h---hcCcEEEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccCC
Confidence 5 46899999988652 1234566777777665 34588765 16778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH------HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003655 675 FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG------EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 748 (805)
Q Consensus 675 fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~------e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 748 (805)
||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +||+.+++|+++|++.+.
T Consensus 293 ~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~ 368 (388)
T TIGR02149 293 LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRAE 368 (388)
T ss_pred CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888 78888885554 899999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHH
Q 003655 749 EKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 749 e~ysw~~~a~rll~Ly~~ 766 (805)
++|||+.+++++.++|+.
T Consensus 369 ~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 369 EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HhCCHHHHHHHHHHHHHh
Confidence 999999999999999863
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.9e-38 Score=348.96 Aligned_cols=366 Identities=20% Similarity=0.276 Sum_probs=266.6
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecC
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 68999973 34599999999 67777899999999 88865322100 01
Q ss_pred ccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH----cCCcEE
Q 003655 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK----LGVTQC 432 (805)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~----lgip~v 432 (805)
..++.+..++.... + ......+.......+.+.+. +.+||+||+|++.+...+..++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-P-------LFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-c-------hhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11233333332111 0 00111111122222222222 248999999987654444444432 279999
Q ss_pred EEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003655 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (805)
Q Consensus 433 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI 512 (805)
++.|+....... ....+. ...+.+++.+|.|++.|....+.+.+. +
T Consensus 116 ~~~h~~~~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~- 161 (371)
T cd04962 116 TTLHGTDITLVG--------QDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------F- 161 (371)
T ss_pred EEEcCCcccccc--------ccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------c-
Confidence 999975321100 011111 123467889999999998876633221 0
Q ss_pred CCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHH
Q 003655 513 DVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWY 592 (805)
Q Consensus 513 ~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~ 592 (805)
....++.+||||+|...|.+...... +..+++ .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEAL-------------------KRRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHH-------------------HHhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 01568999999999887765443211 233555 56788999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC
Q 003655 593 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 672 (805)
Q Consensus 593 ~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~ 672 (805)
..+.+. .+++|+++|+|++ .+.+++.++++++.++|.|+|.+ +++..+++. +|++|+||..
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~~ 280 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE-----------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSEK 280 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC-----------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCCc
Confidence 998765 5689999999965 35677888899999999999943 358888885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCC
Q 003655 673 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYT 752 (805)
Q Consensus 673 E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ys 752 (805)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +||+.+.+|++++++.+.++||
T Consensus 281 E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs 356 (371)
T cd04962 281 ESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERFD 356 (371)
T ss_pred CCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999996655 8999999999999999889999
Q ss_pred HHHHHHHHHHHHHH
Q 003655 753 WKIYSQRLLTLTGV 766 (805)
Q Consensus 753 w~~~a~rll~Ly~~ 766 (805)
|+.+++++.++|+.
T Consensus 357 ~~~~~~~~~~~y~~ 370 (371)
T cd04962 357 SERIVPQYEALYRR 370 (371)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999863
No 20
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.7e-38 Score=359.07 Aligned_cols=281 Identities=18% Similarity=0.269 Sum_probs=231.5
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--HcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecC
Q 003655 403 QGKPDLIIGNYSDGNIVASLLAH--KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 403 ~~kPDlIh~h~~~~~lva~llar--~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 480 (805)
+.+||+||+|++..+..+..+++ ..+.|.++|+|+..... ......+. ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISS--------REVLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccccccc--------chhhhhhh-----HHHHHHHHhCCEEEECC
Confidence 35799999999877777777766 34557789999853211 00001111 01234678999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003655 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 481 ~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 560 (805)
+...+.+.+ .|++ ..|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l~~--------------------~g~~--~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRLQK--------------------MGCP--PEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHHHH--------------------cCCC--HHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 877663221 1343 56899999999998886532110
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcE
Q 003655 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 561 ~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V 640 (805)
..+...|+++||+.+.||++.+++|++.+.+..++++|+|+|+|+. .++++++++++++.++|
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~-----------~~~l~~~~~~~~l~~~V 281 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW-----------ERRLRTLIEQYQLEDVV 281 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 2345679999999999999999999999988788999999999954 46788999999999999
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCC
Q 003655 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 714 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~------E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d 714 (805)
.|+| .++.+++..+++. +|+||+||.. ||||++++||||||+|||+|+.||..|+|.++.+|++++|+|
T Consensus 282 ~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d 356 (406)
T PRK15427 282 EMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEND 356 (406)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCC
Confidence 9999 7788999999996 9999999974 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 715 GEQAAEILVDFFEKCKA-DPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 715 ~e~lA~aI~~~l~~l~~-dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
+++++++|.+++ + ||+.+++|+++|++++.++|||+..++++.++|+.
T Consensus 357 ~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 357 AQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999997665 7 99999999999999999999999999999999864
No 21
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=1.6e-38 Score=365.29 Aligned_cols=375 Identities=17% Similarity=0.219 Sum_probs=264.9
Q ss_pred CCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceee
Q 003655 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (805)
Q Consensus 274 p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~ 353 (805)
-++|||++++ +.. +-+..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~-------~~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPS-------PFSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCc-------CCcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 4568999996 322 1245799999999 66777799999999 998653211 00
Q ss_pred ecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEE
Q 003655 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQC 432 (805)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~-~lva~llar~lgip~v 432 (805)
..++.+++++..+. +... .. .+.+ .+...+.+.+. +.+|||||+|.+.. .+.+..+++..++|+|
T Consensus 107 ---~~g~~v~~~~~~~~-~~~~----~~-~~~~--~~~~~l~~~i~---~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 ---FHGAKVIGSWSFPC-PFYQ----KV-PLSL--ALSPRIISEVA---RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred ---ccCceeeccCCcCC-ccCC----Cc-eeec--cCCHHHHHHHH---hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 12344443322111 0000 00 0000 01112222222 24799999998654 3456667888999999
Q ss_pred EEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003655 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (805)
Q Consensus 433 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI 512 (805)
++.|+......+.. .+..+.. . .....+..++.+|.|+++|....+.+.+. ...
T Consensus 173 ~~~h~~~~~~~~~~--~~~~~~~---~--~~~~~r~~~~~ad~ii~~S~~~~~~l~~~-------------------~~~ 226 (465)
T PLN02871 173 MSYHTHVPVYIPRY--TFSWLVK---P--MWDIIRFLHRAADLTLVTSPALGKELEAA-------------------GVT 226 (465)
T ss_pred EEEecCchhhhhcc--cchhhHH---H--HHHHHHHHHhhCCEEEECCHHHHHHHHHc-------------------CCC
Confidence 99997533211111 0111100 0 01124567789999999998876633221 011
Q ss_pred CCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHH
Q 003655 513 DVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWY 592 (805)
Q Consensus 513 ~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~ 592 (805)
+ ..++.+||||+|.+.|.|....... +..+.. ..+++++|+|+||+.+.||++.+++++
T Consensus 227 ~--~~kv~vi~nGvd~~~f~p~~~~~~~------------------~~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 227 A--ANRIRVWNKGVDSESFHPRFRSEEM------------------RARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred C--cCeEEEeCCccCccccCCccccHHH------------------HHHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 2 4689999999999998775432211 111211 134678999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC
Q 003655 593 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 672 (805)
Q Consensus 593 ~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~ 672 (805)
+++ ++++|+|+|+|+. .++++++++. .+|.|+| .++.+++..+|+. +|++|+||..
T Consensus 286 ~~~----~~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~ 341 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY-----------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSES 341 (465)
T ss_pred HhC----CCcEEEEEeCChH-----------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCcc
Confidence 876 5799999999854 3455555553 4799999 7778999999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccccccc---CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q 003655 673 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVN---GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 749 (805)
Q Consensus 673 E~fGltvlEAMA~GlPVVaT~~GG~~EiI~d---g~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e 749 (805)
|+||++++||||||+|||+|+.||..|++++ +.+|++++|+|+++++++|.+++ +|++.+++|++++++.+ +
T Consensus 342 E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~-~ 416 (465)
T PLN02871 342 ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV-E 416 (465)
T ss_pred cccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999999999 99999999999999999996665 89999999999999988 6
Q ss_pred hCCHHHHHHHHHH-HHHHh
Q 003655 750 KYTWKIYSQRLLT-LTGVY 767 (805)
Q Consensus 750 ~ysw~~~a~rll~-Ly~~~ 767 (805)
+|||+.+++++++ .|+..
T Consensus 417 ~fsw~~~a~~l~~~~Y~~~ 435 (465)
T PLN02871 417 KWDWRAATRKLRNEQYSAA 435 (465)
T ss_pred hCCHHHHHHHHHHHHHHHH
Confidence 8999999999998 57644
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=5.9e-38 Score=351.64 Aligned_cols=375 Identities=18% Similarity=0.228 Sum_probs=276.1
Q ss_pred CcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeee
Q 003655 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (805)
Q Consensus 275 ~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i 354 (805)
|+-||++++.--+|-|. ...||.++++. +++++|+. +|+ |+|...+.-. ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 67899999987776543 34699999999 66666643 898 9998765311 011
Q ss_pred cCccCeEEEEeccccCCc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003655 355 YGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (805)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~-~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~ 433 (805)
...+|+.++++++....+ ...+|.+. ..++ |.......+......++||||+|... .+...+..+..++|.+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPLP----YSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cchh----HHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 112356777776643211 11222222 2233 33333333333323579999999754 35555556666789999
Q ss_pred EecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003655 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (805)
Q Consensus 434 t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~ 513 (805)
+.|.... ...+..++.||++|....+...+ +.+
T Consensus 127 ~~h~~~~--------------------------~~~~~~~~~ii~~S~~~~~~~~~---------------------~~~ 159 (380)
T PRK15484 127 HMHNAFE--------------------------PELLDKNAKIIVPSQFLKKFYEE---------------------RLP 159 (380)
T ss_pred EEecccC--------------------------hhHhccCCEEEEcCHHHHHHHHh---------------------hCC
Confidence 9996311 01235779999999877653221 112
Q ss_pred CCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHH
Q 003655 514 VFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYG 593 (805)
Q Consensus 514 ~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~ 593 (805)
..++.+||||+|.+.|.+..... .++.+|+ ++++++|+|+||+.+.||++.|++|+.
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~-------------------~~~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPN-------------------LRQQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHH-------------------HHHHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 45789999999998887643321 1234566 567789999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC-
Q 003655 594 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY- 672 (805)
Q Consensus 594 ~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~- 672 (805)
++.+.+|+++|+|+|+++... +.+...+.+++++++++++ .+|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~~--~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~~ 287 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTASS--KGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQVE 287 (380)
T ss_pred HHHHhCCCeEEEEEeCCcccc--ccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCCc
Confidence 998888999999999986521 1122345567777777765 5799999 7778999999995 9999999975
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEE-EECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhC
Q 003655 673 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY-HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKY 751 (805)
Q Consensus 673 E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~-l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~y 751 (805)
|+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.+++ +|++. .+|+++|++.+.++|
T Consensus 288 E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~f 362 (380)
T PRK15484 288 EAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSKY 362 (380)
T ss_pred cccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999 568899999999996655 89985 789999999999999
Q ss_pred CHHHHHHHHHHHHHHh
Q 003655 752 TWKIYSQRLLTLTGVY 767 (805)
Q Consensus 752 sw~~~a~rll~Ly~~~ 767 (805)
||+.++++++++|+.|
T Consensus 363 sw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 363 SWEGVTQRFEEQIHNW 378 (380)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998754
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1.1e-36 Score=342.56 Aligned_cols=364 Identities=15% Similarity=0.203 Sum_probs=247.7
Q ss_pred HHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccccccchhhHHHHHH---
Q 003655 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTE--- 392 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~--- 392 (805)
+|+++|+++||+|+ ++|....... .+ ++++++++..+... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67788899999999 9987643210 11 57888877543211 123333322211
Q ss_pred ---HHHHHHHH--HcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhh-hcccc----cccch
Q 003655 393 ---DVAVEIAK--ELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWK-NLDDK----YHFSC 461 (805)
Q Consensus 393 ---~~~~~i~~--~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~-~~~~~----y~f~~ 461 (805)
.+...+.. ..+.+||+||+|...+ .+..+++. .++|+|..+|.+..... ++.... ..... .+...
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 145 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEG--ADVGFDPEFPPSLDDALRLRN 145 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCC--CCCCCCCCCCCchhHHHHHHH
Confidence 11222222 2245899999997554 22234444 46888876653221110 100000 00000 01011
Q ss_pred hhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhh
Q 003655 462 QFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541 (805)
Q Consensus 462 ~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl 541 (805)
........++.+|.||++|....+.+.+. +..|+.|||||+|.+.|.|........
T Consensus 146 ~~~~~~~~~~~ad~vi~~s~~~~~~~~~~------------------------~~~ki~vI~ngvd~~~f~~~~~~~~~~ 201 (396)
T cd03818 146 RNALILLALAQADAGVSPTRWQRSTFPAE------------------------LRSRISVIHDGIDTDRLRPDPQARLRL 201 (396)
T ss_pred hhhHhHHHHHhCCEEECCCHHHHhhCcHh------------------------hccceEEeCCCccccccCCCchhhhcc
Confidence 11113457899999999998876632211 146899999999999988765432211
Q ss_pred hcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEee-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHH
Q 003655 542 KSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEE 620 (805)
Q Consensus 542 ~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGR-L~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee 620 (805)
. ...++ .+++++|+|+|| +.+.||++.+++|+..+.+..++++|+|+|++....+...+.
T Consensus 202 ~-----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~ 262 (396)
T cd03818 202 P-----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPD 262 (396)
T ss_pred c-----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCC
Confidence 0 11122 457789999998 999999999999999998888999999999853211000000
Q ss_pred H-HHHHHH-HHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 003655 621 Q-AEMKKM-YSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 698 (805)
Q Consensus 621 ~-~e~~~l-~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~ 698 (805)
. .+.+.+ +++...++ .++|.|+| .++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||..
T Consensus 263 ~~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~ 336 (396)
T cd03818 263 GESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR 336 (396)
T ss_pred cccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch
Confidence 0 011222 22222222 47899999 7888999999995 999999999999999999999999999999999999
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003655 699 EIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 699 EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll 761 (805)
|+|.++.+|++++++|+++++++|.+++ +||+.+++|+++|++++.++|||+.++++|+
T Consensus 337 e~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 337 EVITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred hhcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999999999999999999999996665 8999999999999999988999999999886
No 24
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=5.7e-37 Score=342.25 Aligned_cols=386 Identities=20% Similarity=0.283 Sum_probs=263.0
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecC
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||++++|... .||.+.++. +|+++|+++||+|+ |+|...+.. .+ .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~---~~~~~~ 51 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HC---FEETKD 51 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hc---chhccC
Confidence 78999976642 489999999 66777799999999 998642211 00 011111
Q ss_pred ccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003655 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIA--KELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI 434 (805)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~--~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t 434 (805)
.++.+...+.....+. .++ ...+..+.......+. .....++|+||+|....+.. ++....+.|++++
T Consensus 52 -~~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~--~~~~~~~~~~i~~ 121 (392)
T cd03805 52 -GTLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVP--LLKLFSPSKILFY 121 (392)
T ss_pred -CeeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHH--HHHHhcCCcEEEE
Confidence 1122222211000000 000 0011112121111111 12236899999986554332 2233334899999
Q ss_pred ecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003655 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (805)
Q Consensus 435 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~ 514 (805)
.|...... ......++. .++.. ....+..+++.+|.|+++|....+.+.+..+ .+.
T Consensus 122 ~h~~~~~~-~~~~~~~~~---~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~------------------~~~- 177 (392)
T cd03805 122 CHFPDQLL-AQRGSLLKR---LYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTFP------------------SLA- 177 (392)
T ss_pred EecChHHh-cCCCcHHHH---HHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHhc------------------ccc-
Confidence 99432110 000001111 11110 1124667899999999999877653322211 111
Q ss_pred CCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHH
Q 003655 515 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 594 (805)
Q Consensus 515 ~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~ 594 (805)
..++.+|+||+|.+.|.|....... ...+. .++.++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2334699999999888664332110 11222 4677899999999999999999999999
Q ss_pred hHccC---CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHh-cCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCC
Q 003655 595 NAKLR---ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 670 (805)
Q Consensus 595 l~~~~---~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~-~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS 670 (805)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| +++.+++..+++. +|++++||
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~s 307 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYTP 307 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEECC
Confidence 98776 79999999998652 12233556788899999 99999999999 7778899999995 99999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Q 003655 671 LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 750 (805)
Q Consensus 671 ~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ 750 (805)
..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++.+++|+++|++++.++
T Consensus 308 ~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~~ 382 (392)
T cd03805 308 SNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKEK 382 (392)
T ss_pred CcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999976 8999999996655 89999999999999999999
Q ss_pred CCHHHHHHHH
Q 003655 751 YTWKIYSQRL 760 (805)
Q Consensus 751 ysw~~~a~rl 760 (805)
|||+.+++++
T Consensus 383 ~s~~~~~~~~ 392 (392)
T cd03805 383 FSTEAFAERL 392 (392)
T ss_pred cCHHHHhhhC
Confidence 9999998764
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.9e-36 Score=336.82 Aligned_cols=365 Identities=16% Similarity=0.193 Sum_probs=261.6
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+.|.++. +.||.+.++. .|++.|.+.|+++. |++....+ ...... ..
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~----~~~~~~----~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS----AFRKRI----QR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC----hhHHHH----Hh
Confidence 677776553 3599999999 66666788899887 77632111 111111 11
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 436 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~-v~t~H 436 (805)
.++.+++++.... ..+. +...+.+.+.+ .+|||||+|...+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~-----------~~~~----~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG-----------KDVA----VYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC-----------CChH----HHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2566777654321 0111 11223333333 3799999997543 44556666778775 34455
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003655 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~ 516 (805)
+....... ...| .+. ...+.....+|.+|++|....+.+.+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~-----~~~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYR-----WLRRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHH-----HHHHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43211100 0111 011 122345567899999998876633222 1232 5
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003655 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 596 (805)
.++.+||||+|.+.|.|........ ...... ..++++|+++||+++.||++.+++|+..+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPI-----------------LPPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhh-----------------hHhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 6899999999998887654221110 001111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC
Q 003655 597 KLRE----LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 672 (805)
Q Consensus 597 ~~~~----~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~ 672 (805)
+..+ +++|+++|+|+. .+.+++.++++++.+++.|+|.+ +++..+++. +|++|+||..
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~~ 282 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSLA 282 (374)
T ss_pred HhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEecccc
Confidence 6544 689999999854 35778889999999999999942 468888885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCC
Q 003655 673 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYT 752 (805)
Q Consensus 673 E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ys 752 (805)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++++++|++++.++||
T Consensus 283 Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 283 EGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred ccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999997665 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 003655 753 WKIYSQRLLTLTGV 766 (805)
Q Consensus 753 w~~~a~rll~Ly~~ 766 (805)
|+.+++++.++|+.
T Consensus 359 ~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 359 INAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
No 26
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1.6e-36 Score=334.69 Aligned_cols=280 Identities=21% Similarity=0.305 Sum_probs=230.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.+||+||+|....+..+..++++.|+|++++.|+......... ..... +. .....+...++.+|.|+++|+..
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~----~~~~~-~~--~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLAL----LLRSR-WA--LYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchh----hcccc-hh--HHHHHHHHHHHhcCEEEECCHHH
Confidence 4799999998777788888899999999999997533221110 00000 11 11123456788999999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhc
Q 003655 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 563 (805)
Q Consensus 484 ~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG 563 (805)
.+.+.+ .|++ ..++.++|||+|.+.|.|...
T Consensus 154 ~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 663221 1333 668999999999887765321
Q ss_pred cccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEe
Q 003655 564 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI 643 (805)
Q Consensus 564 ~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~fl 643 (805)
..+++.++++|++.+.||++.+++|+..+.+..++++|+++|+|+. .++++++++++++.++|+|+
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL-----------LAALEALARALGLGGRVTFL 250 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH-----------HHHHHHHHHHcCCCCeEEEC
Confidence 3456789999999999999999999999988888999999998843 46788889999999999999
Q ss_pred cCCCCcCChHHHHHHHHccCcEEEeCCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003655 644 SSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 644 G~~~~~v~~~el~~~ia~aaDvfV~PS~------~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~ 717 (805)
| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|+++
T Consensus 251 g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~ 325 (367)
T cd05844 251 G----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAA 325 (367)
T ss_pred C----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHH
Confidence 9 7788999999995 999999997 5999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003655 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~ 762 (805)
++++|.+++ +|++.+++|+.+|++++.++|||+.+++++.+
T Consensus 326 l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 326 LAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 999997665 89999999999999999999999999999875
No 27
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=3.5e-36 Score=355.87 Aligned_cols=460 Identities=13% Similarity=0.138 Sum_probs=295.3
Q ss_pred CHHHHHHHHHHHHHHhhcCCCCCCchHH-------HHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCCCcccHhHHhcc
Q 003655 200 NLNSLQHVLRKAEEYLTTVVPETPFSEL-------ALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGR 272 (805)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p~~~~~~~f~~~ 272 (805)
..++=..++++|.+..+.=. .-|.+. ...+|.+|=|.---++.-|+.-+-+++..+-+.-.. ..+ ..
T Consensus 203 ~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~ 276 (694)
T PRK15179 203 ALWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRRRNA-EYD---AG 276 (694)
T ss_pred CHHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhcCcc-ccc---CC
Confidence 34455556666665554422 122222 234677888766667777888888887776433211 011 11
Q ss_pred CCCcc-eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCC------------ccccceeEEeCCC
Q 003655 273 IPMVF-NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGL------------DITPQILIITRLL 339 (805)
Q Consensus 273 ~p~~~-rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh------------~V~~~I~VvT~~~ 339 (805)
+-.+. ||+++.+.. ..||.+.+++ .|+.+|.+.|. ++. |++++...
T Consensus 277 ~~~~~~rIl~vi~sl-----------~~GGAEr~~~--------~La~~l~~~~~~~~~~~g~g~~~~~~--V~~~~~~~ 335 (694)
T PRK15179 277 PESFVGPVLMINGSL-----------GAGGAERQFV--------NTAVALQSAIQQGQSIAGYGVLGPVQ--VVCRSLRS 335 (694)
T ss_pred CCCCcceEEEEeCCC-----------CCCcHHHHHH--------HHHHHHHhcccCcccccCccCCCCcE--EEEEeccc
Confidence 11234 888886443 3599999999 45555577643 222 33443211
Q ss_pred CCCCCC-ccccceeeecCccCeEEEEeccccCCcccc--cccc---c--ccchhhHHHHHHHHHHHHHHHcCCCceEEEE
Q 003655 340 PDAVGT-TCGQRLEKVYGTKYSDILRVPFRTEKGVVR--KWIS---R--FEVWPYLETYTEDVAVEIAKELQGKPDLIIG 411 (805)
Q Consensus 340 ~~~~g~-~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~--~~is---r--~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~ 411 (805)
..|. .+...+. ..|+.+..++..+..+... .+.. + ..+..........+.+.+.+ .+|||||+
T Consensus 336 --~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~---~kpDIVH~ 406 (694)
T PRK15179 336 --REGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS---SVPSVVHI 406 (694)
T ss_pred --ccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH---cCCcEEEE
Confidence 1111 1111111 1356666665443211100 0000 0 00000111112222222222 47999999
Q ss_pred cCCCchHHHHHHHHHcCCcEEE-EecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhcccc
Q 003655 412 NYSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT 490 (805)
Q Consensus 412 h~~~~~lva~llar~lgip~v~-t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~ 490 (805)
|.+.+++++.++++..++|+|+ +.|++...... . .|+. .|. .....+....++.+|++|....+.+.+.
T Consensus 407 h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~~---~~~----~l~~~l~~~~~~i~Vs~S~~~~~~l~~~ 476 (694)
T PRK15179 407 WQDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYRV---EYD----IIYSELLKMRGVALSSNSQFAAHRYADW 476 (694)
T ss_pred eCCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHHH---HHH----HHHHHHHhcCCeEEEeCcHHHHHHHHHH
Confidence 9999888999999999999876 56765322111 0 1100 011 0111122224456677776554421111
Q ss_pred ccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCC
Q 003655 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNK 570 (805)
Q Consensus 491 vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k 570 (805)
.|++ ..|+.|||||||...|.+........ ..+....+.+.
T Consensus 477 -------------------~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~------------------~~~~~~~~~~~ 517 (694)
T PRK15179 477 -------------------LGVD--ERRIPVVYNGLAPLKSVQDDACTAMM------------------AQFDARTSDAR 517 (694)
T ss_pred -------------------cCCC--hhHEEEECCCcCHHhcCCCchhhHHH------------------HhhccccCCCC
Confidence 1343 67999999999998876533221110 01111114457
Q ss_pred cEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcC
Q 003655 571 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRV 650 (805)
Q Consensus 571 ~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v 650 (805)
++|+++||+++.||++.+++|++++.+..++++|+|+|+|+. .++++++++++++.++|.|+|++
T Consensus 518 ~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~-----------~~~L~~l~~~lgL~~~V~flG~~---- 582 (694)
T PRK15179 518 FTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL-----------LESVREFAQRLGMGERILFTGLS---- 582 (694)
T ss_pred eEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc-----------hHHHHHHHHHcCCCCcEEEcCCc----
Confidence 799999999999999999999999988889999999999964 36788999999999999999953
Q ss_pred ChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH--HHHHHHHHHHHHH
Q 003655 651 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG--EQAAEILVDFFEK 728 (805)
Q Consensus 651 ~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~--e~lA~aI~~~l~~ 728 (805)
+++..+|+. +|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|+|. ++++++|.+++..
T Consensus 583 --~dv~~ll~a-aDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 583 --RRVGYWLTQ-FNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred --chHHHHHHh-cCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 257888884 99999999999999999999999999999999999999999999999998774 6899999887754
Q ss_pred hhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 729 CKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 729 l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
+..++ .+++++++++.++|||+.++++++++|+.
T Consensus 660 l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~~ 693 (694)
T PRK15179 660 CAADP----GIARKAADWASARFSLNQMIASTVRCYQM 693 (694)
T ss_pred hhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhCC
Confidence 44454 56788999998999999999999999963
No 28
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.3e-35 Score=325.67 Aligned_cols=361 Identities=17% Similarity=0.191 Sum_probs=255.3
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+||+.+++| |..||.+.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 68999999874 45699999999 77777899999999 99875432210 1122
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
.+++++++|.....+ ...+.+ .+ ..+...+. .+.++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~--~~-~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY--DI-LAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH--HH-HHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 467788777643111 000000 00 01111111 134567777655544 34445556679999999998
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003655 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ 517 (805)
..... ..|..... .+ ....+..+++.+|.|+++|+...+.+.+.. |. .
T Consensus 118 ~~~~~-----~~~~~~~~--~~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-------------------~~----~ 165 (363)
T cd04955 118 LEWKR-----AKWGRPAK--RY--LKFGEKLAVKFADRLIADSPGIKEYLKEKY-------------------GR----D 165 (363)
T ss_pred cceee-----cccccchh--HH--HHHHHHHHHhhccEEEeCCHHHHHHHHHhc-------------------CC----C
Confidence 64321 11111111 01 123456778899999999988776432221 11 1
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003655 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 597 (805)
+ .+||||+|...+.+.... ....+. ++++.++++||+.+.||++.+++|++++..
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~---------------------~~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEI---------------------LKKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhh---------------------HHhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 899999998776541111 112333 234578899999999999999999998754
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHH-hcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC-CCC
Q 003655 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLID-QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAF 675 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~-E~f 675 (805)
+++|+++|+++.. ..+.+.++ .+++.++|+|+| .++.+++..+++. +|++++||.. |+|
T Consensus 221 ---~~~l~ivG~~~~~-----------~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~~ 281 (363)
T cd04955 221 ---GKKLVIVGNADHN-----------TPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGGT 281 (363)
T ss_pred ---CceEEEEcCCCCc-----------chHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCCC
Confidence 7999999998642 12223333 677888999999 7778999999996 9999999998 999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003655 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~ 755 (805)
|++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|.+++ +|++.+.++++++++.+.++|||+.
T Consensus 282 ~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~~ 353 (363)
T cd04955 282 NPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWEK 353 (363)
T ss_pred ChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999966 7999987765 888885554 8999999999999999988999999
Q ss_pred HHHHHHHHHH
Q 003655 756 YSQRLLTLTG 765 (805)
Q Consensus 756 ~a~rll~Ly~ 765 (805)
++++++++|+
T Consensus 354 ~~~~~~~~y~ 363 (363)
T cd04955 354 IADQYEELYK 363 (363)
T ss_pred HHHHHHHHhC
Confidence 9999999884
No 29
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=6.8e-36 Score=339.62 Aligned_cols=400 Identities=15% Similarity=0.141 Sum_probs=269.2
Q ss_pred CCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCc--
Q 003655 295 GYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKG-- 372 (805)
Q Consensus 295 g~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~-- 372 (805)
|.-..||.+..+..+|-++++...+.=+-.|+.|.-+|.++||......|..+-...-.-.+.+...+-+++..-+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (578)
T PRK15490 169 GSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDAT 248 (578)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcc
Confidence 444579999999988887665555554456777888888999987666554332111000222334444444211110
Q ss_pred ----ccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE-ecCCCcccCCCCh
Q 003655 373 ----VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI-AHALEKTKYPDSD 447 (805)
Q Consensus 373 ----~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t-~H~l~~~k~~~s~ 447 (805)
.++.+++.. |-...+.......+++ ..+|||||+|...+++.+.++|+..|+|++++ .|+..... ...
T Consensus 249 ~~~~~~~~~~~~~---~~~~~~~~~~l~~~ir--~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~--~~r 321 (578)
T PRK15490 249 IESPELRLLLSHL---PPVCKYGIKHLVPHLC--ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV--RKR 321 (578)
T ss_pred ccchHHHHHHhcC---ChHHHHHHHHHHHHHH--HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc--hhh
Confidence 111111110 0001111122222333 25899999999888888999999999999654 66521110 000
Q ss_pred hhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCcc
Q 003655 448 IYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD 527 (805)
Q Consensus 448 ~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD 527 (805)
.+...+..... .......+| +++.|....+.+.+ ..+++ ..|+.+||||+|
T Consensus 322 ----~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~l~~-------------------~lgip--~~KI~VIyNGVD 372 (578)
T PRK15490 322 ----LFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRHYAD-------------------WLKLE--AKHFQVVYNGVL 372 (578)
T ss_pred ----HHHHHHHHhhh---hceeEecch-hhhccHHHHHHHHH-------------------HhCCC--HHHEEEEeCCcc
Confidence 00010100000 001122333 44555443331111 11343 679999999999
Q ss_pred CCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEE
Q 003655 528 MSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV 607 (805)
Q Consensus 528 ~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIV 607 (805)
...|.|.......... +...++ +++.++|+++||+.+.||...+++++.++.+..++++|+|+
T Consensus 373 ~~rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIV 435 (578)
T PRK15490 373 PPSTEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLV 435 (578)
T ss_pred hhhcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEE
Confidence 9988775432110000 001233 45668999999999999999999999988877899999999
Q ss_pred eCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC
Q 003655 608 GGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 687 (805)
Q Consensus 608 G~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~Gl 687 (805)
|+|+. .++++++++++++.++|.|+|. .+++..+|+. +|+||+||.+|+||++++|||+||+
T Consensus 436 GdG~~-----------~eeLk~la~elgL~d~V~FlG~------~~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~Gl 497 (578)
T PRK15490 436 GDGDL-----------RAEAQKRAEQLGILERILFVGA------SRDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVGV 497 (578)
T ss_pred eCchh-----------HHHHHHHHHHcCCCCcEEECCC------hhhHHHHHHh-CCEEEEcccccCccHHHHHHHHhCC
Confidence 99954 4678899999999999999994 2468888885 9999999999999999999999999
Q ss_pred cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 688 PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 688 PVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
|||+|+.||..|+|.+|.+|++++++|++++++++..+ .++..+.+.+..|+++|++++.++|||+.++++|.++|..
T Consensus 498 PVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 498 PVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred CEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998888876332 3344555667789999999999999999999999999863
No 30
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=9.6e-37 Score=321.26 Aligned_cols=362 Identities=17% Similarity=0.235 Sum_probs=277.4
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecC
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
++|+|+|+|.| |.+||.+.++. .|++.|.+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 47999999999 67899999999 89999999999998 999888776554322
Q ss_pred ccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEE
Q 003655 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGN--IVASLLAHKLGVTQCTI 434 (805)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~--lva~llar~lgip~v~t 434 (805)
+.+.+++.+|+... ++....|-+...+.-....+++ ++..|||+|.+... --+...++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lr---E~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLR---ERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhh---hceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 23577877777541 1112222221111111222333 37999999998874 46778889999999999
Q ss_pred ecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003655 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (805)
Q Consensus 435 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~ 514 (805)
-|++. ...++.-....... ...+...|.+||+|+...+++ .+...++
T Consensus 121 dHSlf----Gfad~~si~~n~ll---------~~sL~~id~~IcVshtskent-------------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLF----GFADIGSILTNKLL---------PLSLANIDRIICVSHTSKENT-------------------VLRGALA- 167 (426)
T ss_pred ccccc----cccchhhhhhccee---------eeeecCCCcEEEEeecCCCce-------------------EEEeccC-
Confidence 99963 32232211111111 135779999999998765521 1112333
Q ss_pred CCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHH
Q 003655 515 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 594 (805)
Q Consensus 515 ~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~ 594 (805)
+.|+.+|||.++...|.|.+.... +.+...|+.++||...||+|.|+++..+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 679999999999999999554310 3344789999999999999999999999
Q ss_pred hHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCC
Q 003655 595 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 674 (805)
Q Consensus 595 l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~ 674 (805)
+.+.+|+++++|+||||.. ..+++..+++.++++|.++| .++.+++-+.+++ .|+|+.||+.|+
T Consensus 220 vc~~~p~vrfii~GDGPk~-----------i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTEa 283 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPKR-----------IDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTEA 283 (426)
T ss_pred HHhcCCCeeEEEecCCccc-----------chHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHHH
Confidence 9999999999999999862 46778888999999999999 8888999999996 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003655 675 FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 754 (805)
Q Consensus 675 fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~ 754 (805)
||++++|||+||+|||+|++||++|++.++ . .......++++++++.+++.++...|.. --+++.+-|+|+
T Consensus 284 fc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~-i~~~~~~~~dl~~~v~~ai~~~~~~p~~-------~h~~v~~~y~w~ 354 (426)
T KOG1111|consen 284 FCMVIVEAASCGLPVVSTRVGGIPEVLPED-M-ITLGEPGPDDLVGAVEKAITKLRTLPLE-------FHDRVKKMYSWK 354 (426)
T ss_pred HHHHHHHHHhCCCEEEEeecCCccccCCcc-c-eeccCCChHHHHHHHHHHHHHhccCchh-------HHHHHHHhccHH
Confidence 999999999999999999999999999664 2 3244557999999999998877777542 344667789999
Q ss_pred HHHHHHHHHH
Q 003655 755 IYSQRLLTLT 764 (805)
Q Consensus 755 ~~a~rll~Ly 764 (805)
..+++.+++|
T Consensus 355 dVa~rTekvy 364 (426)
T KOG1111|consen 355 DVAERTEKVY 364 (426)
T ss_pred HHHHHHHHHH
Confidence 9999999996
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=1.9e-35 Score=329.34 Aligned_cols=287 Identities=19% Similarity=0.203 Sum_probs=214.6
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 403 ~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
..+||+||+|.+....+ ..+++..++|+|++.|+..... ....|+ .....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------------~~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVWD-------------FLQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHHH-------------HHHHHHHhCCEEeecHHH
Confidence 35899999998875332 2233334899999999743211 111111 112456789998888844
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCC--CCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF--PYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~--p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 560 (805)
.+. .+++ ..++ +||||+|..... +...... ...++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~----------------~~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADI----------------EYILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHH----------------HHHHH
Confidence 322 1222 3455 999999975321 1111111 12234
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcE
Q 003655 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 561 ~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V 640 (805)
.+|+ ++++++|+++||+++.||++.+++|++.+.+..++++|+++|+|+... .+ ..+.++++.+..++.++|
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~---~~---~~~~~~~~~~~~~~~~~v 254 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDD---PE---GWIVYEEVLEYAEGDPDI 254 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCC---ch---hHHHHHHHHHHhCCCCCe
Confidence 5676 678899999999999999999999999998877899999999997521 11 122344555567788899
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHH
Q 003655 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 720 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~ 720 (805)
.|+|... ++.+++..+++ ++|+||+||.+|+||++++||||||+|||+|+.||..++|.++.+|++++ ++++++.
T Consensus 255 ~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~ 329 (372)
T cd03792 255 HVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAV 329 (372)
T ss_pred EEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHH
Confidence 9998321 26788889988 59999999999999999999999999999999999999999999999987 4678888
Q ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 721 ILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 721 aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
+|.+++ .|++.+++|+++|++.+.++|||+.++++++++|+.
T Consensus 330 ~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 330 RILYLL----RDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 886554 899999999999999998999999999999999864
No 32
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=6e-35 Score=317.16 Aligned_cols=372 Identities=18% Similarity=0.214 Sum_probs=263.2
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6888887764 56799999999 67777889999999 887653221100 0000
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~--~lva~llar~lgip~v~t~ 435 (805)
+.......... ..... ..+. .+..... ........+||+||+|.... ...+...+++.++|++++.
T Consensus 52 -~~~~~~~~~~~--~~~~~-----~~~~---~~~~~~~-~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINV--AYGLN-----LARY---LFPPSLL-AWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccch--hhhhh-----hhhh---ccChhHH-HHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 00000000000 00000 0000 0000111 11222235899999987433 4566667778899999999
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003655 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~ 515 (805)
|+........ ...+. +....+..+...++.++.++++|......... +. .
T Consensus 120 ~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~---------------------~~--~ 169 (375)
T cd03821 120 HGMLDPWALP-HKALK------KRLAWFLFERRLLQAAAAVHATSEQEAAEIRR---------------------LG--L 169 (375)
T ss_pred cccccccccc-cchhh------hHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh---------------------hC--C
Confidence 9853322110 00110 11111233456788999999999766542211 11 1
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003655 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l 595 (805)
..++.+||||+|.+.+.+...... +..++. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGR-------------------RRKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhh-------------------hhhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 568999999999988866443221 122333 66789999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003655 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~f 675 (805)
.+.+++++|+++|.+.. .....+..+++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 229 ~~~~~~~~l~i~G~~~~---------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~ 294 (375)
T cd03821 229 AERFPDWHLVIAGPDEG---------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSENF 294 (375)
T ss_pred hhhcCCeEEEEECCCCc---------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCCC
Confidence 88889999999998765 22345566678899999999999 7778999999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003655 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~ 755 (805)
|++++|||+||+|||+|+.||..|++.+ .+|+++++ +.++++++|.+++ +|++.++++++++++.+.++|||+.
T Consensus 295 ~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~ 368 (375)
T cd03821 295 GIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSWTA 368 (375)
T ss_pred CcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999988 78998865 5699999996655 8999999999999999999999999
Q ss_pred HHHHHH
Q 003655 756 YSQRLL 761 (805)
Q Consensus 756 ~a~rll 761 (805)
++++++
T Consensus 369 ~~~~~~ 374 (375)
T cd03821 369 IAQQLL 374 (375)
T ss_pred HHHHhh
Confidence 999886
No 33
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=1.7e-35 Score=324.13 Aligned_cols=347 Identities=19% Similarity=0.243 Sum_probs=260.4
Q ss_pred CcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccc
Q 003655 298 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKW 377 (805)
Q Consensus 298 dtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~ 377 (805)
+.||.+.++. +|+++|+++||+|. +++...+.. ... ...++.++++++....
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~----~~~~~~~~~~~~~~~~------ 59 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AEL----EAEGSRHIKLPFISKN------ 59 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHH----HhcCCeEEEccccccc------
Confidence 4599999999 77777899999998 887532111 111 1124556666654321
Q ss_pred cccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhccccc
Q 003655 378 ISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKY 457 (805)
Q Consensus 378 isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y 457 (805)
.+..+ .+...+.+.+. +.+||+||+|+....+.+.++++..++|++++.|+......
T Consensus 60 -----~~~~~-~~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 60 -----PLRIL-LNVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred -----hhhhH-HHHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 11111 11122222222 24899999998877778888888889999999998532110
Q ss_pred ccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHH
Q 003655 458 HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEE 537 (805)
Q Consensus 458 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~ 537 (805)
.....+..+|.++++|....+.+.+. .|++ ..++.+||||+|...|.+....
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~~~-------------------~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIREN-------------------YGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHHHh-------------------cCCC--hhhEEEecCCccccccCccccc
Confidence 01234678999999998776633211 2333 5689999999999888654322
Q ss_pred HHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCcc
Q 003655 538 KRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD 617 (805)
Q Consensus 538 ~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d 617 (805)
.... ...++.++. ++++++|+++||+.+.||++.+++++..+.+..++++|+|+|+++..
T Consensus 169 ~~~~--------------~~~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~---- 228 (355)
T cd03819 169 PERI--------------LALAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR---- 228 (355)
T ss_pred hHHH--------------HHHHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCccc----
Confidence 1110 012334454 56788999999999999999999999999887789999999998652
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCccc
Q 003655 618 LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGG 696 (805)
Q Consensus 618 ~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS-~~E~fGltvlEAMA~GlPVVaT~~GG 696 (805)
....+.+.+.++++++.++|.|+|. .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.||
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~ 298 (355)
T cd03819 229 ---RFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG 298 (355)
T ss_pred ---chHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC
Confidence 1334556678888899899999994 4578999995 99999999 79999999999999999999999999
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003655 697 PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIY 756 (805)
Q Consensus 697 ~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~ 756 (805)
..|++.++.+|++++++|+++++++|...+ ..|++.+++++++|++.+.++|||+.+
T Consensus 299 ~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 299 ARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred cHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 999999999999999999999999996544 268999999999999999999999853
No 34
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=5.6e-34 Score=311.43 Aligned_cols=271 Identities=21% Similarity=0.285 Sum_probs=224.4
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+||+|+... ..++.+.++..++|++++.|+..... .... ......++.+|.++++|..
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------------~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFR--SPDA---------------IDLDEKLARADFVVAISEY 140 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccc--cCch---------------HHHHHHHhhCCEEEECCHH
Confidence 5899999998754 45555666666899999999743211 0000 1234578899999999998
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 562 (805)
..+.+++.. |.. ..++.++|||+|.+.+.+....
T Consensus 141 ~~~~l~~~~-------------------~~~--~~~~~vi~~~~d~~~~~~~~~~------------------------- 174 (355)
T cd03799 141 NRQQLIRLL-------------------GCD--PDKIHVVHCGVDLERFPPRPPP------------------------- 174 (355)
T ss_pred HHHHHHHhc-------------------CCC--cccEEEEeCCcCHHHcCCcccc-------------------------
Confidence 877433321 222 6689999999998877554300
Q ss_pred ccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 563 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 563 G~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. ...+.+.++++++.++|+|
T Consensus 175 ---~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~ 240 (355)
T cd03799 175 ---PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL-----------RDELEALIAELGLEDRVTL 240 (355)
T ss_pred ---ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc-----------HHHHHHHHHHcCCCCeEEE
Confidence 03567789999999999999999999999988778999999999865 3567888888899999999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 716 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~------E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e 716 (805)
.| .++.+++..+++. +|+++.||.. |+||++++|||+||+|||+|+.|+..|++.++.+|++++++|++
T Consensus 241 ~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~ 315 (355)
T cd03799 241 LG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPE 315 (355)
T ss_pred CC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHH
Confidence 99 7778999999995 9999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003655 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRL 760 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rl 760 (805)
+++++|.+++ +|++.+.+|+++|++.+.++|||+..++++
T Consensus 316 ~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 316 ALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 9999997665 799999999999999999999999988763
No 35
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.8e-35 Score=338.27 Aligned_cols=292 Identities=18% Similarity=0.236 Sum_probs=233.1
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCC--CChhhhhh--cccc-cccchhhhHhHHHhhcCCEEE
Q 003655 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWKN--LDDK-YHFSCQFTADLIAMNHTDFII 477 (805)
Q Consensus 404 ~kPDlIh~h~~~-~~lva~llar~lgip~v~t~H~l~~~k~~--~s~~~~~~--~~~~-y~f~~~~~~e~~a~~~AD~II 477 (805)
.++|+||+|... +++++.+++++.|+|+|+|.|+....... .....|.. +... .++. ...++.+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEEE
Confidence 489999999764 46788888999999999999986321100 00000000 0000 0111 123567889999999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhh
Q 003655 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (805)
Q Consensus 478 t~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 557 (805)
++|....+... ..|++ ..|+.|||||+|.+.|.+....
T Consensus 250 ~~s~~~~~~~~--------------------~~g~~--~~ki~vIpNgid~~~f~~~~~~-------------------- 287 (475)
T cd03813 250 TLYEGNRERQI--------------------EDGAD--PEKIRVIPNGIDPERFAPARRA-------------------- 287 (475)
T ss_pred ecCHHHHHHHH--------------------HcCCC--HHHeEEeCCCcCHHHcCCcccc--------------------
Confidence 99987654211 12443 6799999999999888764321
Q ss_pred hhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCC
Q 003655 558 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN 637 (805)
Q Consensus 558 ~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~ 637 (805)
+. ++++++|+++||+.+.||++.+++|++.+.+..++++|+|+|+++.. ..+.++++++++++++.
T Consensus 288 -----~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~-------~~~~~e~~~li~~l~l~ 353 (475)
T cd03813 288 -----RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDED-------PEYAEECRELVESLGLE 353 (475)
T ss_pred -----cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcC-------hHHHHHHHHHHHHhCCC
Confidence 00 45678999999999999999999999999888899999999998531 14567889999999999
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CceEEEEC
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN------GKSGYHID 711 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~d------g~~G~l~~ 711 (805)
++|+|+| . .++..+++. +|++|+||..|+||++++||||||+|||+|+.||..|++.+ |.+|++++
T Consensus 354 ~~V~f~G----~---~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 354 DNVKFTG----F---QNVKEYLPK-LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVP 425 (475)
T ss_pred CeEEEcC----C---ccHHHHHHh-CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEEC
Confidence 9999999 2 357777874 99999999999999999999999999999999999999988 67999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 712 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 712 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
|+|+++++++|.+++ +|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 426 ~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 426 PADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999996655 89999999999999999999999999999999984
No 36
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=8.3e-34 Score=310.30 Aligned_cols=354 Identities=19% Similarity=0.238 Sum_probs=256.4
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ |++......... . ..
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~---~~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------E---ER 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------h---hc
Confidence 6889987665 55799999999 77777899999999 887653222110 0 11
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
.+..+.+++.... ....+.... ....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~----------~~~~~~~~~----~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLN----------VASTPFSPS----FFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccc----------cccccccHH----HHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 2334555543211 001111011 111111 2245899999998765333333333368899999996
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003655 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ 517 (805)
..... . . ....++ ..+...++.+|.|+++|....+..... .....
T Consensus 116 ~~~~~---~-~----~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~~----------------------~~~~~ 160 (357)
T cd03795 116 DIVKQ---K-L----LLKLYR-----PLQRRFLRRADAIVATSPNYAETSPVL----------------------RRFRD 160 (357)
T ss_pred hhhcc---c-h----hhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHHh----------------------cCCcc
Confidence 32111 0 0 011111 124557899999999998766522211 11135
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003655 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 597 (805)
++.+||||+|.+.+.+...... ..... +.+++.|+++||+.+.||++.+++|+.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEE--------------------AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhh--------------------HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 7899999999988765432211 01112 457789999999999999999999999885
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCC
Q 003655 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAF 675 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~--~E~f 675 (805)
+++|+|+|+|+. ...+.+.++++++.++|.|+| .++..++..+++. +|++++||. .|+|
T Consensus 218 ---~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~~ 278 (357)
T cd03795 218 ---DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEAF 278 (357)
T ss_pred ---CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCccccccc
Confidence 799999999854 356778888889999999999 7888899999995 999999996 6999
Q ss_pred cHHHHHHHHcCCcEEEcCcccccccccc-CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003655 676 GLTVVEAMTCGLPTFATCKGGPAEIIVN-GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 754 (805)
Q Consensus 676 GltvlEAMA~GlPVVaT~~GG~~EiI~d-g~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~ 754 (805)
|++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.++|||+
T Consensus 279 g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 279 GIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred chHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcchH
Confidence 9999999999999999999999999886 89999999999999999997665 899999999999999999999999
Q ss_pred HHH
Q 003655 755 IYS 757 (805)
Q Consensus 755 ~~a 757 (805)
.++
T Consensus 355 ~~~ 357 (357)
T cd03795 355 RMV 357 (357)
T ss_pred hhC
Confidence 764
No 37
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=1.3e-33 Score=307.71 Aligned_cols=387 Identities=18% Similarity=0.249 Sum_probs=272.6
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++.+.. |..||...++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6899987765 33489999999 66777789999999 8876533222111000 011122
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~--~lva~llar~lgip~v~t~ 435 (805)
.++.+.+++...... ..+.. .++.+ ..|.......+.. ...+||+||++.+.. ...+..+++..++|.++++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLK--RLLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHH--HHHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 357777776643211 00000 01111 1222223333321 246899999998432 4556666777799999999
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003655 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~ 515 (805)
|+............... ...+.+ ....+...++.+|.++++|....+.+. ..++.
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRL--LRKLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHH--HHHHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 98643221110000000 000011 112356678999999999988876332 11233
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003655 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l 595 (805)
..++.++|||+|...+.+......+ ...+. ..+++.|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877665432210 11222 46778999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003655 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~f 675 (805)
.+. ++++|+++|+|+. ...+.+.+...++ ++|.++| .++.+++..+++. +|++++|+..|++
T Consensus 246 ~~~-~~~~l~i~G~~~~-----------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~ 307 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE-----------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGPA 307 (394)
T ss_pred hhc-CCeEEEEeCCccc-----------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCccc
Confidence 876 7899999999865 2455555666665 6799999 7788999999995 9999999998875
Q ss_pred -----cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Q 003655 676 -----GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 750 (805)
Q Consensus 676 -----GltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ 750 (805)
|++++|||+||+|||+|+.||..+++.++.+|++++++|+++++++|.+++ .|++.+++|++++++.+.++
T Consensus 308 ~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~ 383 (394)
T cd03794 308 FEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEEK 383 (394)
T ss_pred ccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHh
Confidence 888999999999999999999999999989999999999999999996665 89999999999999999889
Q ss_pred CCHHHHHHHHH
Q 003655 751 YTWKIYSQRLL 761 (805)
Q Consensus 751 ysw~~~a~rll 761 (805)
|||+.++++++
T Consensus 384 ~s~~~~~~~~~ 394 (394)
T cd03794 384 FSREKLAERLL 394 (394)
T ss_pred hcHHHHHHhcC
Confidence 99999998863
No 38
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=2.7e-33 Score=301.27 Aligned_cols=374 Identities=22% Similarity=0.336 Sum_probs=272.8
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++... |..||...++. .|++.|.+.||+|. +++.......... ....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~------~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEE------EVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCcee------eecC-
Confidence 6889987764 23689999999 67777788999999 8886643322110 0000
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
.......... ..........+.... ..+.. ..+||+||++.+.........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~--~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRL-RRLLR--RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHH-HHHhh--hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 000010111111122 22222 24799999999887665557788899999999998
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003655 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ 517 (805)
......... ...........+...++.+|.+++.|....+.+.+.. +.. ..
T Consensus 118 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~-------------------~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE--------LGLLLKLARALERRALRRADRIIAVSEATREELRELG-------------------GVP--PE 168 (374)
T ss_pred chhhccccc--------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcC-------------------CCC--CC
Confidence 654322111 0000011112355678899999999988776433221 111 35
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003655 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 597 (805)
++.++|||+|...+.+.. ...+ ...+. ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876643 1110 11111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcH
Q 003655 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 677 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGl 677 (805)
..++++|+++|++. ....+.+.+++++..++|.++| .++.+++..+++. +|++++|+..|++|+
T Consensus 227 ~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~~ 290 (374)
T cd03801 227 EYPDVRLVIVGDGP-----------LREELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFGL 290 (374)
T ss_pred hcCCeEEEEEeCcH-----------HHHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhccccc
Confidence 77899999999774 3466777888889999999999 7778999999996 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003655 678 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 678 tvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a 757 (805)
+++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+++ .|++.+++|++++++.+.+.|||+.++
T Consensus 291 ~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (374)
T cd03801 291 VLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRVA 366 (374)
T ss_pred hHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999999999999999999999999996655 899999999999999999999999999
Q ss_pred HHHHHHHH
Q 003655 758 QRLLTLTG 765 (805)
Q Consensus 758 ~rll~Ly~ 765 (805)
+++.++|+
T Consensus 367 ~~~~~~~~ 374 (374)
T cd03801 367 ARTEEVYY 374 (374)
T ss_pred HHHHHhhC
Confidence 99998863
No 39
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.6e-33 Score=306.68 Aligned_cols=363 Identities=20% Similarity=0.290 Sum_probs=260.4
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++.... |..||.+.++. .|+++|+++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6889987664 45599999999 77777899999999 888654322110 00
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~-~lva~llar~lgip~v~t~H 436 (805)
....+...+......+ +..... .....+.+ + ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~-~--~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALPP-----RRRVRRLL-D--AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eecccc-----hhhHHHHH-H--hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222221111000 000000 01111122 1 24799999886654 46677788889999999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003655 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~ 516 (805)
+......... .. ... ..+. ........+.+|.+++.|....+.... .. .
T Consensus 116 ~~~~~~~~~~--~~-~~~--~~~~--~~~~~~~~~~~d~i~~~s~~~~~~~~~----------------------~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY--GL-GPL--SWLA--WAYLRWFHNRADRVLVPSPSLADELRA----------------------RG--F 164 (364)
T ss_pred cChHHHhhhc--cc-chH--hHhh--HHHHHHHHHhCCEEEeCCHHHHHHHhc----------------------cC--C
Confidence 7532110000 00 000 0000 122345678999999999887652110 11 4
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003655 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 596 (805)
.++.+++||+|.+.|.|....... +..++ +.++++|+++|++.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEAL------------------RARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHH------------------HHHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 578999999999888765432211 12222 346788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003655 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fG 676 (805)
+. ++++|+++|+++.. ..++ +..++|.|+| .++.+++..+++. +|+++.||..|+||
T Consensus 224 ~~-~~~~l~i~G~~~~~-----------~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~~ 280 (364)
T cd03814 224 RR-PPVRLVIVGDGPAR-----------ARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETFG 280 (364)
T ss_pred hc-CCceEEEEeCCchH-----------HHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccCC
Confidence 77 88999999998651 1222 4567899999 7788999999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003655 677 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIY 756 (805)
Q Consensus 677 ltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~ 756 (805)
++++|||+||+|||+++.|+..|+++++.+|++++++|.++++++|.+++ .||+.+++|++++++.+ ++|||+.+
T Consensus 281 ~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~~ 355 (364)
T cd03814 281 LVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEAF 355 (364)
T ss_pred cHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHHH
Confidence 99999999999999999999999999999999999999999999996665 89999999999999998 88999999
Q ss_pred HHHHHHHHH
Q 003655 757 SQRLLTLTG 765 (805)
Q Consensus 757 a~rll~Ly~ 765 (805)
+++++++|+
T Consensus 356 ~~~~~~~~~ 364 (364)
T cd03814 356 LDNLLEAYR 364 (364)
T ss_pred HHHHHHhhC
Confidence 999999873
No 40
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=2.1e-33 Score=305.17 Aligned_cols=333 Identities=17% Similarity=0.175 Sum_probs=237.7
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecC
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||+++++..++- +.|..||.+.++. +|++.|.++||+|+ +++........ ..
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 7999999766531 3467899999999 66667789999999 88865322110 00
Q ss_pred ccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003655 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H 436 (805)
......+.. ................. ..+.+ ..+||+||+|.+..... +++..++|.|.+.|
T Consensus 54 ---~~~~~~~~~---------~~~~~~~~~~~~~~~~~-~~~~~--~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLR---------LDAPGRDRAEAEALALA-ERALA--AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCcc---------cccchhhHhhHHHHHHH-HHHHh--cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 001100000 00000000011111111 22222 35799999998877554 56778999999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003655 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~ 516 (805)
+...... .+ ........+.++++|....+... . .
T Consensus 116 ~~~~~~~-----~~---------------~~~~~~~~~~~~~~s~~~~~~~~------------------------~--~ 149 (335)
T cd03802 116 GPPDPEL-----LK---------------LYYAARPDVPFVSISDAQRRPWP------------------------P--L 149 (335)
T ss_pred CCCCccc-----ch---------------HHHhhCcCCeEEEecHHHHhhcc------------------------c--c
Confidence 8543210 00 11345678889999977655110 1 1
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003655 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 596 (805)
.++.+||||+|.+.|.+. +.+++.|+++||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578899999999877551 2356789999999999999999999765
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcC-CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC-CCC
Q 003655 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK-LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEA 674 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~-L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~-~E~ 674 (805)
.+++|+++|+++.. ..+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|+
T Consensus 196 ---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E~ 256 (335)
T cd03802 196 ---AGIPLKLAGPVSDP-----------DYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEEP 256 (335)
T ss_pred ---cCCeEEEEeCCCCH-----------HHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccCC
Confidence 36899999999651 22333333333 568999999 7778899999995 999999997 599
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003655 675 FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 754 (805)
Q Consensus 675 fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~ 754 (805)
||++++||||||+|||+|+.||..|++.++.+|+++++ +++++++|.++. .++ .+++++++.++|||+
T Consensus 257 ~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~~ 324 (335)
T cd03802 257 FGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSAA 324 (335)
T ss_pred cchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCHH
Confidence 99999999999999999999999999999999999985 999999996553 332 246788888999999
Q ss_pred HHHHHHHHHHH
Q 003655 755 IYSQRLLTLTG 765 (805)
Q Consensus 755 ~~a~rll~Ly~ 765 (805)
.++++|+++|+
T Consensus 325 ~~~~~~~~~y~ 335 (335)
T cd03802 325 RMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHhC
Confidence 99999999984
No 41
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=4.1e-33 Score=303.16 Aligned_cols=370 Identities=20% Similarity=0.297 Sum_probs=263.8
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++...+ |..||...++. .++++|.++||+|+ ++|....+..... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~---------~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE---------EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc---------cc
Confidence 6888886654 67899999998 77778899999999 8886643321110 00
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~-~lva~llar~lgip~v~t~H 436 (805)
.+....+.+.... ......+. +... ...... ..+||+||++.+.. +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~~-------~~~~~~~~----~~~~-~~~~~~--~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFKY-------PDFRLPLP----IPRA-LIIILK--ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccchh-------hhhhcccc----HHHH-HHHHHh--hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 0111111111000 00000111 1111 112122 35799999987654 56677788889999999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhh-hHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003655 437 ALEKTKYPDSDIYWKNLDDKYHFSCQF-TADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~f~~~~-~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~ 515 (805)
...... .... ............ ..+...++.+|.++++|....+...+. +.
T Consensus 117 ~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~--------------------~~--- 168 (374)
T cd03817 117 TMYEDY-THYV----PLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREY--------------------GV--- 168 (374)
T ss_pred CCHHHH-HHHH----hcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhc--------------------CC---
Confidence 854311 0000 000000000011 245667889999999998765532211 22
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003655 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l 595 (805)
..++.++|||+|...+.+...... +..++. +.+++.|+++|++.+.||++.+++++..+
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDE-------------------RRKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHH-------------------HHhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 346899999999988866543221 122344 56778999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003655 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~f 675 (805)
.+..++++|+++|+++. .+.+.++++++++.++|.|+| .++.+++..+++. +|++++|+..|++
T Consensus 228 ~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~~ 291 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTETQ 291 (374)
T ss_pred HHhCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccCc
Confidence 88778999999999854 456778888899999999999 7788999999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003655 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~ 755 (805)
|++++|||+||+|||+++.|+..|++.++.+|+++++.+. +++++|.+++ +|++.+++|++++++.+.+ ++
T Consensus 292 ~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~-~~--- 362 (374)
T cd03817 292 GLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEK-FS--- 362 (374)
T ss_pred ChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHH-HH---
Confidence 9999999999999999999999999999999999998877 8888885554 8999999999999999854 44
Q ss_pred HHHHHHHHHH
Q 003655 756 YSQRLLTLTG 765 (805)
Q Consensus 756 ~a~rll~Ly~ 765 (805)
.++++.++|+
T Consensus 363 ~~~~~~~~~~ 372 (374)
T cd03817 363 FAKKVEKLYE 372 (374)
T ss_pred HHHHHHHHHh
Confidence 5666777665
No 42
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=3.4e-33 Score=305.83 Aligned_cols=281 Identities=21% Similarity=0.257 Sum_probs=219.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+||+|....++++.+++.. .++|.+.+.|+..... .. .. .........++.++++|..
T Consensus 78 ~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~------~~------~~-----~~~~~~~~~~~~~~~~s~~ 140 (360)
T cd04951 78 FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGG------RL------RM-----LAYRLTDFLSDLTTNVSKE 140 (360)
T ss_pred cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchh------HH------HH-----HHHHHHhhccCceEEEcHH
Confidence 47999999988776666666554 3678899999753211 00 00 1112334457778888876
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 562 (805)
..+...+. .+++ ..++.+||||+|...|.+...... ..++.+
T Consensus 141 ~~~~~~~~-------------------~~~~--~~~~~~i~ng~~~~~~~~~~~~~~-----------------~~~~~~ 182 (360)
T cd04951 141 ALDYFIAS-------------------KAFN--ANKSFVVYNGIDTDRFRKDPARRL-----------------KIRNAL 182 (360)
T ss_pred HHHHHHhc-------------------cCCC--cccEEEEccccchhhcCcchHHHH-----------------HHHHHc
Confidence 65522111 1222 568999999999887765443221 123446
Q ss_pred ccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 563 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 563 G~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
++ ++++++++++||+.+.||++.+++++.++.+..++++|+|+|+|+. .+++.+.++++++.++|.|
T Consensus 183 ~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~ 249 (360)
T cd04951 183 GV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL-----------RATLERLIKALGLSNRVKL 249 (360)
T ss_pred Cc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc-----------HHHHHHHHHhcCCCCcEEE
Confidence 66 6678999999999999999999999999988778999999999865 3567788888898899999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 722 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI 722 (805)
+|.+ +++..+++. +|++++||..|+||++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|
T Consensus 250 ~g~~------~~~~~~~~~-ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i 320 (360)
T cd04951 250 LGLR------DDIAAYYNA-ADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKI 320 (360)
T ss_pred eccc------ccHHHHHHh-hceEEecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHH
Confidence 9943 467888885 99999999999999999999999999999999999999976 79999999999999999
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 723 VDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 723 ~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
.++++ .+++.++.++++ ++.+.++|||+.++++|+++|+
T Consensus 321 ~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 321 DEILK---MSGEERDIIGAR-RERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhh
Confidence 76653 577778888777 8888899999999999999985
No 43
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=6.3e-33 Score=302.69 Aligned_cols=357 Identities=18% Similarity=0.220 Sum_probs=251.0
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++|++.. |..||.+.++. +|+++|.+.||+|+ +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998653 44799999999 77777899999998 776543221100000 00
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc---hHHH---HHHHHHcCCcE
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG---NIVA---SLLAHKLGVTQ 431 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~---~lva---~llar~lgip~ 431 (805)
....... ......+ ....+.+. ..+||+||++.+.+ ...+ ....+..++|+
T Consensus 52 ~~~~~~~---------------~~~~~~~-----~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV---------------LDNPLDY-----RRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee---------------cCCchhH-----HHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0011111 11122222 24799999877432 1222 22234589999
Q ss_pred EEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003655 432 CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 511 (805)
Q Consensus 432 v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~g 511 (805)
+.+.|+..... . .+ .........++.+|.|+++|..... +...
T Consensus 109 i~~~h~~~~~~----~-~~----------~~~~~~~~~~~~~d~ii~~s~~~~~---~~~~------------------- 151 (366)
T cd03822 109 VVTLHTVLLHE----P-RP----------GDRALLRLLLRRADAVIVMSSELLR---ALLL------------------- 151 (366)
T ss_pred EEEEecCCccc----c-ch----------hhhHHHHHHHhcCCEEEEeeHHHHH---HHHh-------------------
Confidence 99999861100 0 00 0011234568899999999733332 1110
Q ss_pred CCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHH
Q 003655 512 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEW 591 (805)
Q Consensus 512 I~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA 591 (805)
.....++.+||||+|...+.+..... ..+. ..++++|+++|++.+.||++.+++|
T Consensus 152 -~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 -RAYPEKIAVIPHGVPDPPAEPPESLK----------------------ALGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred -hcCCCcEEEeCCCCcCcccCCchhhH----------------------hhcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 11146899999999987665543211 1111 4578899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCc-CChHHHHHHHHccCcEEEeCC
Q 003655 592 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR-VRNGELYRYICDTKGAFVQPA 670 (805)
Q Consensus 592 ~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~-v~~~el~~~ia~aaDvfV~PS 670 (805)
+.++.+..++++|+++|++..... .......++++++++.++|.|+| . ++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~------~~~~~~~~~i~~~~~~~~v~~~~----~~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE------RYRGEAYALAERLGLADRVIFIN----RYLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh------hhhhhhHhHHHhcCCCCcEEEec----CcCCHHHHHHHHhh-cCEEEecc
Confidence 999988888999999999865210 00011114578889999999998 4 788999999996 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003655 671 LYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 748 (805)
Q Consensus 671 ~~E--~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 748 (805)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77777888999999999999999996665 899999999999999996
Q ss_pred HhCCHHHHHHHHHHHHH
Q 003655 749 EKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 749 e~ysw~~~a~rll~Ly~ 765 (805)
+ |||+.+++++.++|+
T Consensus 351 ~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A-MSWERVAERYLRLLA 366 (366)
T ss_pred h-CCHHHHHHHHHHHhC
Confidence 5 999999999999873
No 44
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=3.4e-33 Score=302.30 Aligned_cols=363 Identities=18% Similarity=0.186 Sum_probs=264.8
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++-.. .||.+.++. .|++.|.+.||+|. +++...... ....+. .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~----~~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGE----LGEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchh----hhHHHH----h
Confidence 5777765442 389999999 67777788999998 777542211 111111 1
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEec
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H 436 (805)
.++.+..++.... ...+. +...+.+.+. +.+||+||++.......+.+.+.. .++|.+.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~~----~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDPG----ALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccHH----HHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 3456666554321 01111 1112222222 248999999887776666666665 6889999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003655 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~ 516 (805)
....... .|. ... .........+.+|.++++|....+.... .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~-----~~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRL-----VARLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhH-----HHHHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8643221 010 000 1112345667899999999877653221 1333 5
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003655 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 596 (805)
.++.++|||+|...|.+....... .++.+|+ ++++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARAR-----------------LREELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHH-----------------HHHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 689999999999877665432211 1244666 677889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHH-hcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003655 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLID-QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~-~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~f 675 (805)
+..++++|+++|.++.. ........ ++++.++|.|.|.+ +++..+++. +|++++||..|+|
T Consensus 220 ~~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~~ 281 (365)
T cd03807 220 KKFPNARLLLVGDGPDR-----------ANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEGF 281 (365)
T ss_pred HhCCCeEEEEecCCcch-----------hHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCccccC
Confidence 87889999999998652 23334444 78888999999932 468888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003655 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~ 755 (805)
|++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++.+.++|||+.
T Consensus 282 ~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 282 PNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIEA 355 (365)
T ss_pred CcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999977 899999999999999997665 7999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 003655 756 YSQRLLTLTG 765 (805)
Q Consensus 756 ~a~rll~Ly~ 765 (805)
.++++.++|+
T Consensus 356 ~~~~~~~~y~ 365 (365)
T cd03807 356 MVEAYEELYR 365 (365)
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 45
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=3.5e-33 Score=316.67 Aligned_cols=393 Identities=12% Similarity=0.054 Sum_probs=256.5
Q ss_pred CCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceee
Q 003655 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (805)
Q Consensus 274 p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~ 353 (805)
|...||++++.-- +|.+..+. +++++|+++||+|+ |+|...+... +.
T Consensus 1 ~~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~~--------~~ 47 (415)
T cd03816 1 PKRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPPH--------DE 47 (415)
T ss_pred CCccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCCC--------HH
Confidence 3456888887522 35556667 67778899999999 8886532211 11
Q ss_pred ecCccCeEEEEecccc-CCcccccccccccchhhHHHHHHHHHHHHHHH-cCCCceEEEEcCCCc---hHHHHHHHHHcC
Q 003655 354 VYGTKYSDILRVPFRT-EKGVVRKWISRFEVWPYLETYTEDVAVEIAKE-LQGKPDLIIGNYSDG---NIVASLLAHKLG 428 (805)
Q Consensus 354 i~~~~~v~I~rvp~~~-~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~-l~~kPDlIh~h~~~~---~lva~llar~lg 428 (805)
.....++.++.++..+ ..+. ......+...........+... ...+||+||+|.+.. ...+.++++..+
T Consensus 48 ~~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~ 121 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRR 121 (415)
T ss_pred HhcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhC
Confidence 1122467777776643 1100 0111112111111111111111 124799999987554 345666778889
Q ss_pred CcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceee
Q 003655 429 VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRV 508 (805)
Q Consensus 429 ip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~ 508 (805)
+|+|++.|+........ ..........+.. ..+.+.++.+|.|||+|....+.+.+
T Consensus 122 ~~~V~~~h~~~~~~~~~---~~~~~~~~~~~~~--~~e~~~~~~ad~ii~vS~~~~~~l~~------------------- 177 (415)
T cd03816 122 TKLIIDWHNYGYTILAL---KLGENHPLVRLAK--WYEKLFGRLADYNLCVTKAMKEDLQQ------------------- 177 (415)
T ss_pred CeEEEEcCCchHHHHhc---ccCCCCHHHHHHH--HHHHHHhhcCCEeeecCHHHHHHHHh-------------------
Confidence 99999999864211100 0000000011111 23667889999999999987763321
Q ss_pred eccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchh-hhhhhhccccCCCCcEEEEEeeccCCCCHHH
Q 003655 509 VHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV-ENKEHLCVLKDRNKPILFTMARLDRVKNLTG 587 (805)
Q Consensus 509 ~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~-~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~ 587 (805)
.|++ ..|+.|||||. ...|.|........... . ...-+++. ......++. +++..+++++||+.+.||++.
T Consensus 178 -~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~~~ 249 (415)
T cd03816 178 -FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELFL-K--LAKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDFGI 249 (415)
T ss_pred -hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHHH-h--ccccccccccccccceec-CCCceEEEEeccccCCCCHHH
Confidence 2333 67999999994 45676654332110000 0 00000000 000011221 234567888999999999999
Q ss_pred HHHHHHHhHc------cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHc
Q 003655 588 LVEWYGKNAK------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD 661 (805)
Q Consensus 588 LleA~~~l~~------~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~ 661 (805)
|++|+..+.+ .+|+++|+|+|+|+. .++++++++++++.+.+.+.| +++.+++..+|+.
T Consensus 250 li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l~~ 314 (415)
T cd03816 250 LLDALVAYEKSAATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKLLAS 314 (415)
T ss_pred HHHHHHHHHHhhcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHHHh
Confidence 9999999864 247899999999965 467888999999975444556 6778999999995
Q ss_pred cCcEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCC---HHH
Q 003655 662 TKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD---PSY 735 (805)
Q Consensus 662 aaDvfV~PS---~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~d---p~~ 735 (805)
+|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|.+++ +| |+.
T Consensus 315 -aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~~~ 387 (415)
T cd03816 315 -ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNRGK 387 (415)
T ss_pred -CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCHHH
Confidence 99999753 35789999999999999999999999999999999999994 8999999997665 77 999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003655 736 WDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 736 ~~~ms~~ar~~v~e~ysw~~~a~rll 761 (805)
+++|+++|++.. .++|+...++.+
T Consensus 388 ~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 388 LNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 999999999986 678876655543
No 46
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1.2e-33 Score=313.96 Aligned_cols=267 Identities=16% Similarity=0.215 Sum_probs=202.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcE--EEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCH
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQ--CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~--v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 481 (805)
.+||+||+|.....+.+.++++..++|. +.+.|...... ..+ ....+..+|.++++|.
T Consensus 83 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~------------~~~--------~~~~~~~~d~~i~~S~ 142 (359)
T PRK09922 83 TQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK------------KHA--------ECKKITCADYHLAISS 142 (359)
T ss_pred cCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc------------chh--------hhhhhhcCCEEEEcCH
Confidence 4899999998766667777777777654 44455321100 000 0012368999999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003655 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 482 ~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 561 (805)
...+.+. ..|++ ..++.+||||+|.+.+.....
T Consensus 143 ~~~~~~~--------------------~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------- 175 (359)
T PRK09922 143 GIKEQMM--------------------ARGIS--AQRISVIYNPVEIKTIIIPPP------------------------- 175 (359)
T ss_pred HHHHHHH--------------------HcCCC--HHHEEEEcCCCCHHHccCCCc-------------------------
Confidence 8766322 12444 568999999999654432110
Q ss_pred hccccCCCCcEEEEEeecc--CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCc
Q 003655 562 LCVLKDRNKPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 639 (805)
Q Consensus 562 lG~l~~~~k~iIl~vGRL~--~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~ 639 (805)
...++++|+++||+. +.||++.+++++.++. ++++|+|+|+|++ .++++++++++++.++
T Consensus 176 ----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~~ 237 (359)
T PRK09922 176 ----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSD-----------FEKCKAYSRELGIEQR 237 (359)
T ss_pred ----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCcc-----------HHHHHHHHHHcCCCCe
Confidence 023568899999996 4699999999998874 3799999999965 3578889999999999
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHHH
Q 003655 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGEQA 718 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~-~GG~~EiI~dg~~G~l~~p~d~e~l 718 (805)
|.|+|.+.+ +.+++..+++. +|++|+||.+|+||++++||||||+|||+|+ .||+.|+|.++.+|++++|+|++++
T Consensus 238 v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~l 314 (359)
T PRK09922 238 IIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEF 314 (359)
T ss_pred EEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHH
Confidence 999995542 34678888885 9999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 719 AEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 719 A~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
+++|.+++ +|++.+ +.++......+|+-+.+.+++.++|.
T Consensus 315 a~~i~~l~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 315 VGKLNKVI----SGEVKY---QHDAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHH----hCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99997766 788754 23333334477888888888888875
No 47
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=2.1e-33 Score=308.03 Aligned_cols=347 Identities=14% Similarity=0.196 Sum_probs=247.8
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++.. ..||.+.++. +++++|.+.||+|+ +++...... ...... ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~----~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEI----EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHH----HH
Confidence 577876543 3599999999 55666678999999 887543221 011111 11
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 436 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~-v~t~H 436 (805)
.++.+++++.... ..+. +...+.+ +.. +.+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~~----~~~~~~~-~~~--~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPLK----YFKKLYK-LIK--KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHHH----HHHHHHH-HHh--cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2455665443321 1111 2222222 222 35899999999877677777777778776 45677
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003655 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~ 516 (805)
............. .. ...+...++.+|.++++|....+.+... +. .
T Consensus 113 ~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---------------------~~--~ 158 (358)
T cd03812 113 NTSDSHDKKKKIL--------KY---KVLRKLINRLATDYLACSEEAGKWLFGK---------------------VK--N 158 (358)
T ss_pred cccccccccchhh--------HH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---------------------CC--c
Confidence 6432221110000 00 1224457789999999998876632211 11 5
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003655 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 596 (805)
.++.+||||+|.+.|.+....... +...+. ..+++.|+++||+.+.||++.+++|+..+.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKK------------------RRELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhH------------------HHHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 689999999999887664432111 122333 567899999999999999999999999999
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003655 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fG 676 (805)
+.+++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. +|++|+||..|+||
T Consensus 219 ~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~~ 280 (358)
T cd03812 219 KKNPNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGLP 280 (358)
T ss_pred HhCCCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCCC
Confidence 8889999999999864 3567888889999999999994 3568888885 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q 003655 677 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 749 (805)
Q Consensus 677 ltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e 749 (805)
++++||||||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+.+++++..+......
T Consensus 281 ~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~~ 348 (358)
T cd03812 281 LVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLDA 348 (358)
T ss_pred HHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccchh
Confidence 999999999999999999999999988 4577777778999999996655 8999999998888776543
No 48
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=7.5e-33 Score=313.55 Aligned_cols=373 Identities=13% Similarity=0.105 Sum_probs=240.5
Q ss_pred CcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCC-CccccceeEEeCCCCCCCC-------Cc
Q 003655 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQG-LDITPQILIITRLLPDAVG-------TT 346 (805)
Q Consensus 275 ~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~G-h~V~~~I~VvT~~~~~~~g-------~~ 346 (805)
+.|||+|++..+. |..+|..+-++ .++..|+++| |+|+ |+++..+.... ..
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 3599999998776 77899999999 7777889999 7999 99876542210 00
Q ss_pred cccce--e-eecCccCeEEEEeccccCCcccccccc--cccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH-
Q 003655 347 CGQRL--E-KVYGTKYSDILRVPFRTEKGVVRKWIS--RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIV- 419 (805)
Q Consensus 347 ~~~~~--e-~i~~~~~v~I~rvp~~~~~~~~~~~is--r~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~-~lv- 419 (805)
+.... + .+....+-++.++|-.+.. ..+...+ +..+++. .++.+.+.+ .+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p-~yp~r~~~~~r~~~~~-----~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIK-FYPGKFSTDKRSILPV-----GDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEecccccc-cCcccccccccccCCh-----HHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 00010 0 0111112344454433211 0111000 0111111 123333332 4799999998875 554
Q ss_pred -HHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHH-hhcCCEEEecCHHHHhhccccccccccc
Q 003655 420 -ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA-MNHTDFIITSTFQEIAGSKDTVGQYESH 497 (805)
Q Consensus 420 -a~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~~~~~~~~~~vgqY~~~ 497 (805)
|..++++.++ +|.+.|+-. ..|.. ++.. .....+.... ...+. -.++|.+++.|....+ +
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y-~~Y~~---~~~~-g~~~~~l~~~-~~~~~~r~~~d~vi~pS~~~~~-l---------- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNY-LEYVK---REKN-GRVKAFLLKY-INSWVVDIYCHKVIRLSAATQD-Y---------- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCCh-HHHHH---Hhcc-chHHHHHHHH-HHHHHHHHhcCEEEccCHHHHH-H----------
Confidence 6666777765 888999821 11100 0000 0000000000 01111 1358999999975433 0
Q ss_pred cccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEe
Q 003655 498 TAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMA 577 (805)
Q Consensus 498 ~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vG 577 (805)
.....+.++|||.+.|.|....... ..+ ..+.-.+.++|+|
T Consensus 195 ------------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~-~~~~~~~~~l~vG 235 (462)
T PLN02846 195 ------------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN-GEQAFTKGAYYIG 235 (462)
T ss_pred ------------------hhCEEecCceechhhcCCCcccHhh--------------------hcC-CCCCcceEEEEEe
Confidence 1122334589999988776432111 011 0011245799999
Q ss_pred eccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHH
Q 003655 578 RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 657 (805)
Q Consensus 578 RL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~ 657 (805)
||.+.||++.|++|++++.+..++++|+|+|+|++ .++++++++++++..++ |.| ..+.++
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G----~~~~~~--- 296 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPG----RDHADP--- 296 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECC----CCCHHH---
Confidence 99999999999999999988778999999999986 46788899999886544 777 333443
Q ss_pred HHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHH
Q 003655 658 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWD 737 (805)
Q Consensus 658 ~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~ 737 (805)
+++ ++|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.+++++++.+++. .++ .
T Consensus 297 ~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~---~ 366 (462)
T PLN02846 297 LFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP---A 366 (462)
T ss_pred HHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc---h
Confidence 555 58999999999999999999999999999999998 59999999999985 89999999977763 233 2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 738 KISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 738 ~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
.++.+++ +.|||+..+++++++|+.-
T Consensus 367 ~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 367 PLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred hHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 2333322 5899999999999999865
No 49
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=9.5e-33 Score=313.47 Aligned_cols=379 Identities=17% Similarity=0.202 Sum_probs=249.6
Q ss_pred EEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHC--CCccccceeEEeCCCCCCCCCcc--ccceeee
Q 003655 279 VVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ--GLDITPQILIITRLLPDAVGTTC--GQRLEKV 354 (805)
Q Consensus 279 I~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~--Gh~V~~~I~VvT~~~~~~~g~~~--~~~~e~i 354 (805)
|+++.|+-. ..||.+..++|.|++| .++ ||+|+ |+|.........-. ......+
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f~~ 60 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRFNI 60 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhcCe
Confidence 677766543 2369999999777765 555 88888 99987433110000 0001111
Q ss_pred cCccCeEEEEec-cccCCcccccccccccchhh---HHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCC
Q 003655 355 YGTKYSDILRVP-FRTEKGVVRKWISRFEVWPY---LETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGV 429 (805)
Q Consensus 355 ~~~~~v~I~rvp-~~~~~~~~~~~isr~~i~~~---l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~-~lva~llar~lgi 429 (805)
...+++.++++. .+ .|+.+ ..|+. +-.+...+...+....+.+||||+.+...+ .+. ++....++
T Consensus 61 ~~~~~~~~~~~~~~~-------~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~--~~~~~~~~ 130 (419)
T cd03806 61 ELDRPRIVFFLLKYR-------KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYP--LVRLLGGC 130 (419)
T ss_pred ecCCCceEEEEecce-------eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHH--HHHHhcCC
Confidence 112344544442 21 12222 22322 123334444444333345799998876433 222 12222378
Q ss_pred cEEEEecCCCcccCCCCh--hhhh-------------hcccccccch---hhhHhHHHhhcCCEEEecCHHHHhhccccc
Q 003655 430 TQCTIAHALEKTKYPDSD--IYWK-------------NLDDKYHFSC---QFTADLIAMNHTDFIITSTFQEIAGSKDTV 491 (805)
Q Consensus 430 p~v~t~H~l~~~k~~~s~--~~~~-------------~~~~~y~f~~---~~~~e~~a~~~AD~IIt~S~~~~~~~~~~v 491 (805)
|++..+|- +..-.+.. ...+ ......+... ....+.++++.||.|+++|....+.+++.+
T Consensus 131 ~~i~y~h~--P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~ 208 (419)
T cd03806 131 PVGAYVHY--PTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLW 208 (419)
T ss_pred eEEEEecC--CcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHh
Confidence 99999992 10000000 0000 0000000000 012467789999999999988776443321
Q ss_pred cccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCc
Q 003655 492 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKP 571 (805)
Q Consensus 492 gqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~ 571 (805)
+ . ..++.||+||+|.+.|.+.... ...+++
T Consensus 209 ~--------------------~--~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~ 238 (419)
T cd03806 209 K--------------------R--NTKPSIVYPPCDVEELLKLPLD----------------------------EKTREN 238 (419)
T ss_pred C--------------------c--CCCcEEEcCCCCHHHhcccccc----------------------------cccCCc
Confidence 1 1 2478999999998776543210 034567
Q ss_pred EEEEEeeccCCCCHHHHHHHHHHhHccCC-----CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCC
Q 003655 572 ILFTMARLDRVKNLTGLVEWYGKNAKLRE-----LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 572 iIl~vGRL~~~Kgi~~LleA~~~l~~~~~-----~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~ 646 (805)
+|+|+||+.+.||++.+++|+.++.+..+ +++|+|+|++... +...+.++++++++++++.++|.|+|
T Consensus 239 ~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g-- 311 (419)
T cd03806 239 QILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVV-- 311 (419)
T ss_pred EEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEec--
Confidence 99999999999999999999999987654 4999999998642 11235678899999999999999999
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCceEEEECCCCHHHHHHHH
Q 003655 647 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIV---NGKSGYHIDPYHGEQAAEIL 722 (805)
Q Consensus 647 ~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~-~EiI~---dg~~G~l~~p~d~e~lA~aI 722 (805)
.++.+++..+|+. +|++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |++++|++|
T Consensus 312 --~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai 386 (419)
T cd03806 312 --NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAI 386 (419)
T ss_pred --CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHH
Confidence 7888999999995 99999999999999999999999999999999886 57887 899999985 999999999
Q ss_pred HHHHHHhhCCH-HHHHHHHHHHHHHHHHhCCHHHHHH
Q 003655 723 VDFFEKCKADP-SYWDKISLGGLKRIEEKYTWKIYSQ 758 (805)
Q Consensus 723 ~~~l~~l~~dp-~~~~~ms~~ar~~v~e~ysw~~~a~ 758 (805)
.+++ +++ ..++.+ .++++.+.++|||+.+.+
T Consensus 387 ~~ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 387 EKIL----SLSEEERLRI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHHH----hCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence 7766 554 455555 555555779999998753
No 50
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=9.2e-33 Score=302.99 Aligned_cols=343 Identities=19% Similarity=0.242 Sum_probs=247.3
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecC
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||++++... ..||.+.++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 2489999999 66677799999999 7764310
Q ss_pred ccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc--CCcEEEE
Q 003655 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL--GVTQCTI 434 (805)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~l--gip~v~t 434 (805)
.. .+.+. ..+||+||+|......+......+. ++|.|++
T Consensus 42 ---------~~---------------------------~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------AL---------------------------ISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------hh---------------------------hhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 00 00111 2479999999876655444444445 9999999
Q ss_pred ecCCCcccC----CCChhhhhh------cccccc---cchhhh-H-hHHHhhcCCEEEecCHHHHhhccccccccccccc
Q 003655 435 AHALEKTKY----PDSDIYWKN------LDDKYH---FSCQFT-A-DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTA 499 (805)
Q Consensus 435 ~H~l~~~k~----~~s~~~~~~------~~~~y~---f~~~~~-~-e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~ 499 (805)
+|+...... ......|.. ....+. ...+.. . .......++.++++|....+.+.+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 998643211 000000000 000000 111111 0 1112246778888887665532221
Q ss_pred cccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeec
Q 003655 500 FTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARL 579 (805)
Q Consensus 500 f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL 579 (805)
..++ ..++.++|||+|.+.|.|...... +..+++ +++++++++.|+.
T Consensus 154 ----------~~~~--~~~~~vi~ngi~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ----------SLFK--GIPIEVIPNGIDTTIFRPRDKREA-------------------RKRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ----------cccC--CCceEEeCCCCcccccCCCcHHHH-------------------HHHhCC--CCCCeEEEEEecC
Confidence 0122 568999999999998876543321 234555 5667777777777
Q ss_pred cC--CCCHHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCC-hHHH
Q 003655 580 DR--VKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVR-NGEL 655 (805)
Q Consensus 580 ~~--~Kgi~~LleA~~~l~~~-~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~-~~el 655 (805)
.. .||++.+++++..+.+. .+++.++++|++... .. .++..+|.|+| +++ .+++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~-----------~~-------~~~~~~v~~~g----~~~~~~~~ 258 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE-----------IP-------PDLPFPVHYLG----SLNDDESL 258 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh-----------hh-------ccCCCceEecC----CcCCHHHH
Confidence 65 89999999999998765 578999999998641 00 14567899999 566 6788
Q ss_pred HHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHH
Q 003655 656 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSY 735 (805)
Q Consensus 656 ~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~ 735 (805)
..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ +|++.
T Consensus 259 ~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~~ 333 (365)
T cd03825 259 ALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPDE 333 (365)
T ss_pred HHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHHH
Confidence 899995 9999999999999999999999999999999999999999999999999999999999997665 79999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 736 WDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 736 ~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
+++|++++++.+.++|||+.++++|.++|+.
T Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 334 REELGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999863
No 51
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.1e-32 Score=313.20 Aligned_cols=395 Identities=18% Similarity=0.226 Sum_probs=259.3
Q ss_pred ccCCCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccc
Q 003655 271 GRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQR 350 (805)
Q Consensus 271 ~~~p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~ 350 (805)
++....++|+++.|+-. ..||.+..+.|-|++| +++|++++ |.|.|... |... .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~-d~~~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDH-DASP---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCC-CCCH---HHH
Confidence 44445678999876653 2369999999666654 77898544 44777653 2211 111
Q ss_pred eeeecCccCeEE------EEeccccCCcccccccccccchhhHH---HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 003655 351 LEKVYGTKYSDI------LRVPFRTEKGVVRKWISRFEVWPYLE---TYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421 (805)
Q Consensus 351 ~e~i~~~~~v~I------~rvp~~~~~~~~~~~isr~~i~~~l~---~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~ 421 (805)
+......-++.+ +++. .++|+.+ ..|+++. .....+...+.......||+++-....+ ...
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-------~~~~~~~-~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~ 153 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-------KRKWIEE-ETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTY 153 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-------ccccccc-ccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHH
Confidence 111111222222 1111 1345543 4555532 2222222222222223566555332211 122
Q ss_pred HHHHHcCCcEEEEecCCCccc------------CCCC----hhhhhh-cccccccchhhhHhHHHhhcCCEEEecCHHHH
Q 003655 422 LLAHKLGVTQCTIAHALEKTK------------YPDS----DIYWKN-LDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 422 llar~lgip~v~t~H~l~~~k------------~~~s----~~~~~~-~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
.+++..++|+++.+|-..... |..+ ...+.. ....|..... ..+..+...||.|+|+|....
T Consensus 154 pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~ 232 (463)
T PLN02949 154 PLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTK 232 (463)
T ss_pred HHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHH
Confidence 334456899999999432110 0000 000000 0000110000 134566789999999998877
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhcc
Q 003655 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCV 564 (805)
Q Consensus 485 ~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~ 564 (805)
+.+++.+ +. +.++.+|+||+|.+.+.+....
T Consensus 233 ~~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~--------------------------- 263 (463)
T PLN02949 233 SHIEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE--------------------------- 263 (463)
T ss_pred HHHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc---------------------------
Confidence 6443321 11 3478899999997655321100
Q ss_pred ccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc----cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcE
Q 003655 565 LKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK----LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 565 l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~----~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V 640 (805)
.+.+++.++++||+.+.||++.+++|++++.+ ..++++|+|+|+++.. +...+.++++++++++++.++|
T Consensus 264 -~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~-----~~~~~~~eL~~la~~l~L~~~V 337 (463)
T PLN02949 264 -RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNK-----EDEERLQKLKDRAKELGLDGDV 337 (463)
T ss_pred -ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCc-----ccHHHHHHHHHHHHHcCCCCcE
Confidence 02356789999999999999999999998764 2468999999998541 1123457888999999999999
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCHH
Q 003655 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA-EIIVN---GKSGYHIDPYHGE 716 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~-EiI~d---g~~G~l~~p~d~e 716 (805)
.|+| .++.+++..+++. ++++|.||..|+||++++||||||+|||+++.||+. |+|.+ |.+|++++ |++
T Consensus 338 ~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~ 410 (463)
T PLN02949 338 EFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVE 410 (463)
T ss_pred EEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHH
Confidence 9999 7788999999996 999999999999999999999999999999999985 77765 67899885 899
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
++|++|.++++ .+++.+++|+++|++++ ++|||+.+++++.+.++.
T Consensus 411 ~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 411 EYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 99999977662 36888999999999998 779999999999998763
No 52
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=3.7e-32 Score=291.64 Aligned_cols=345 Identities=17% Similarity=0.232 Sum_probs=249.5
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++++.. + .||...++. +|+++|+++||+|+ +++....+. . . . ...
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~--~----~-~--~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEP--P----F-Y--ELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCC--C----c-c--ccC
Confidence 6888886654 2 689999999 67777788999999 888654320 0 0 0 111
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcC-CcEEEEec
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLG-VTQCTIAH 436 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lg-ip~v~t~H 436 (805)
.++.+..++...... . ...+. +...+. .+++ ..+||+||++.+. ....+.....+ +|.+.+.|
T Consensus 50 ~~~~~~~~~~~~~~~-----~--~~~~~----~~~~~~-~~l~--~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK-----L--LARFK----KLRRLR-KLLK--NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc-----h--hcccc----chHHHH-Hhhc--ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 234555544432110 0 00000 111111 2222 2589999999876 22222333344 49999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003655 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~ 516 (805)
+....... ...+ ...+...++.+|.+++.|...... . .+. ..
T Consensus 114 ~~~~~~~~--~~~~------------~~~~~~~~~~~d~ii~~s~~~~~~---~-------------------~~~--~~ 155 (348)
T cd03820 114 NSPDAYKK--RLRR------------LLLRRLLYRRADAVVVLTEEDRAL---Y-------------------YKK--FN 155 (348)
T ss_pred CCccchhh--hhHH------------HHHHHHHHhcCCEEEEeCHHHHHH---h-------------------hcc--CC
Confidence 75322100 0000 012456789999999999876410 0 011 15
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003655 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 596 (805)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++..+.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999998765432 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003655 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fG 676 (805)
+..++++|+|+|++++ ...+.++++++++.++|.+.|. .+++..+++. +|+++.||.+|+||
T Consensus 205 ~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~~ 266 (348)
T cd03820 205 KKHPDWKLRIVGDGPE-----------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGFP 266 (348)
T ss_pred hcCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCccccccC
Confidence 8889999999999865 3556778889999999999993 4688999996 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003655 677 LTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 677 ltvlEAMA~GlPVVaT~~G-G~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~ 755 (805)
++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ +||+.+++|++++++.+ ++|||+.
T Consensus 267 ~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~ 341 (348)
T cd03820 267 MVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIEN 341 (348)
T ss_pred HHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHHH
Confidence 9999999999999999865 5677887778999999999999999997665 89999999999997655 8999999
Q ss_pred HHHHHH
Q 003655 756 YSQRLL 761 (805)
Q Consensus 756 ~a~rll 761 (805)
++++|.
T Consensus 342 ~~~~~~ 347 (348)
T cd03820 342 IIKQWE 347 (348)
T ss_pred HHHHhc
Confidence 998875
No 53
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=5.5e-32 Score=291.59 Aligned_cols=356 Identities=18% Similarity=0.268 Sum_probs=257.5
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++. .||...++. +|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57777755 278888888 67777889999999 8876532221 0112
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-HcCCcEEEEec
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar-~lgip~v~t~H 436 (805)
.++.++.+|..... . ..+..+.. ...+.+.+. +.+||+||++...+.+.+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~---~~~~~~~~-~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------I---NPFKDLKA-LLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------c---ChHhHHHH-HHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 35666666654310 1 11111111 111222222 25899999998777777777776 44566777778
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003655 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~ 516 (805)
+......... ..+ . .....++..++.+|.+++.|....+...+. .+.+ ..
T Consensus 113 ~~~~~~~~~~-~~~-------~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSGG-LKR-------R--LYLLLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhccch-hHH-------H--HHHHHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 7543221110 000 0 011235567889999999998877632221 0111 13
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003655 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~ 596 (805)
.++.+++||+|.+.+.+.... .+++++.|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 467788999998776543321 0456789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHH-HHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003655 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYS-LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~-li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~f 675 (805)
+.+++++|+++|+++.. ..... .+...+..++|.|+|. .+++..+++. +|++++||..|+|
T Consensus 215 ~~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~~ 276 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE-----------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREGL 276 (359)
T ss_pred hcCCCeEEEEEcCCCcc-----------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccCc
Confidence 87889999999999762 11111 3666777889999994 4578888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003655 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~ 755 (805)
|++++|||+||+|||+|+.+|..|++.++.+|++++++|+++++++|.+++ .|++.++++++++++++.++|||+.
T Consensus 277 ~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~ 352 (359)
T cd03808 277 PRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEEI 352 (359)
T ss_pred chHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999999999999999999999999996654 8999999999999999999999999
Q ss_pred HHHHHH
Q 003655 756 YSQRLL 761 (805)
Q Consensus 756 ~a~rll 761 (805)
++++++
T Consensus 353 ~~~~~~ 358 (359)
T cd03808 353 VVKKLL 358 (359)
T ss_pred HHHHhh
Confidence 999876
No 54
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.1e-32 Score=300.62 Aligned_cols=364 Identities=20% Similarity=0.238 Sum_probs=256.2
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++.......... ....
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~-----~~~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLL-----PLRA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccc-----cchh--
Confidence 578887666521 5799999999 77777899999999 7765532211100 0000
Q ss_pred cCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003655 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
.... .... .....+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 54 -~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---cccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 0000 001111111111111111111 25899999998776443 6679999999998
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003655 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ 517 (805)
+.....+.....+ ............++.+|.++++|....+.+.+.. +++ ..
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~-------------------~~~--~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLRYL-------------------GVP--PD 164 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh-------------------CcC--HH
Confidence 6543322111110 0011112355688999999999988776433221 122 55
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003655 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~ 597 (805)
++.++|||+|...+.+...... ..... ..+++.|+++||+.+.||++.+++++..+.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAEV--------------------LRALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHHH--------------------HHHhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 8999999999988766543321 11122 4577899999999999999999999999998
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcH
Q 003655 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 677 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGl 677 (805)
..++++|+++|++... .......+++.++.++|.++| .++.+++..+++. +|+++.||..|+||+
T Consensus 223 ~~~~~~l~i~G~~~~~----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~~ 287 (365)
T cd03809 223 KGPDPKLVIVGKRGWL----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFGL 287 (365)
T ss_pred hcCCCCEEEecCCccc----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCCC
Confidence 7778999999987652 112223336778889999999 7788999999995 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003655 678 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 678 tvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a 757 (805)
+++|||+||+|||+|+.|+..|++. .+|++++++|.++++++|.+++ +|++.+.++++++++.+ ++|||+..+
T Consensus 288 ~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~~ 360 (365)
T cd03809 288 PVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKTA 360 (365)
T ss_pred CHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHHH
Confidence 9999999999999999999999984 4699999999999999996654 89999999999999665 889999999
Q ss_pred HHHH
Q 003655 758 QRLL 761 (805)
Q Consensus 758 ~rll 761 (805)
++++
T Consensus 361 ~~~~ 364 (365)
T cd03809 361 RRTL 364 (365)
T ss_pred HHHh
Confidence 9886
No 55
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=1.7e-31 Score=288.72 Aligned_cols=284 Identities=28% Similarity=0.438 Sum_probs=232.4
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCH
Q 003655 403 QGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (805)
Q Consensus 403 ~~kPDlIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 481 (805)
..+||+||+++... ...+..+++..++|++.+.|+.......... .........++.+|.+++.|.
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 45899999987654 5667777888899999999986443221111 111224567889999999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003655 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 482 ~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 561 (805)
...+...+. ++ ...++.++|||+|...+.+...... ..
T Consensus 158 ~~~~~~~~~--------------------~~--~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~ 195 (377)
T cd03798 158 ALADELKAL--------------------GI--DPEKVTVIPNGVDTERFSPADRAEA--------------------RK 195 (377)
T ss_pred HHHHHHHHh--------------------cC--CCCceEEcCCCcCcccCCCcchHHH--------------------Hh
Confidence 877633221 11 2668999999999988876543221 01
Q ss_pred hccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003655 562 LCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFR 641 (805)
Q Consensus 562 lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~ 641 (805)
.+. ..+++.|+++|++.+.||++.+++++..+.+.+++++|+++|.++. ...+.+.++.+++.++|.
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~~~~v~ 262 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL-----------REALEALAAELGLEDRVT 262 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----------hHHHHHHHHhcCCcceEE
Confidence 122 4577899999999999999999999999988788999999999864 356777788889989999
Q ss_pred EecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003655 642 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 721 (805)
Q Consensus 642 flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~a 721 (805)
+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|++++++|+++++++
T Consensus 263 ~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 337 (377)
T cd03798 263 FLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEA 337 (377)
T ss_pred EeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHH
Confidence 999 7888999999996 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 722 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 722 I~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
|.+++ +|+.. +++.++++.+.++|||+..++++.++++
T Consensus 338 i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 338 ILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 97665 78876 7889999999999999999999999875
No 56
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=8.7e-32 Score=292.01 Aligned_cols=354 Identities=15% Similarity=0.175 Sum_probs=246.3
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCc
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++++..+ ..+||.+.++. .|+++|+++||+|+ +++........... .
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~---------~ 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKE---------V 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCcccc---------c
Confidence 68888866642 24699999999 66667789999999 88765332211100 0
Q ss_pred cCeEEEEecc--ccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEE
Q 003655 358 KYSDILRVPF--RTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTI 434 (805)
Q Consensus 358 ~~v~I~rvp~--~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~-~lva~llar~lgip~v~t 434 (805)
.+..+...+. ....... ........+...........+.+. .+||+||+|.... .......++..++|++++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~ 126 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALP---RDLFHLSDYDNPAVVAEFARLLED--FRPDVVHFHHLQGLGVSILRAARDRGIPIVLT 126 (359)
T ss_pred ccceeeccccccccCCCch---hhhhHHHhccCHHHHHHHHHHHHH--cCCCEEEECCccchHHHHHHHHHhcCCCEEEE
Confidence 1111111110 0000000 000001111111111122233332 4799999998754 334455667789999999
Q ss_pred ecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003655 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (805)
Q Consensus 435 ~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~ 514 (805)
.|+...... + ........|.++++|....+...+. +..
T Consensus 127 ~hd~~~~~~------~---------------~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~~- 164 (359)
T cd03823 127 LHDYWLICP------R---------------QGLFKKGGDAVIAPSRFLLDRYVAN--------------------GLF- 164 (359)
T ss_pred Eeeeeeecc------h---------------hhhhccCCCEEEEeCHHHHHHHHHc--------------------CCC-
Confidence 997532110 0 0011223399999998776633221 222
Q ss_pred CCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHH
Q 003655 515 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 594 (805)
Q Consensus 515 ~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~ 594 (805)
..++.+|+||+|...+.+... +. +.++++|+++||+.+.||++.+++++..
T Consensus 165 -~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~~ 215 (359)
T cd03823 165 -AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFKR 215 (359)
T ss_pred -ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHHH
Confidence 458999999999987654321 01 4567889999999999999999999999
Q ss_pred hHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC-CC
Q 003655 595 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YE 673 (805)
Q Consensus 595 l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~-~E 673 (805)
+.+ ++++|+++|+++.. ....... +..++|.++| .++.+++..+++. +|++++||. .|
T Consensus 216 l~~--~~~~l~i~G~~~~~-----------~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~e 274 (359)
T cd03823 216 LPR--GDIELVIVGNGLEL-----------EEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWPE 274 (359)
T ss_pred HHh--cCcEEEEEcCchhh-----------hHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcccC
Confidence 876 78999999998652 1111111 5668999999 7778999999995 999999997 79
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCH
Q 003655 674 AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW 753 (805)
Q Consensus 674 ~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw 753 (805)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.++++++++++....
T Consensus 275 ~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~---- 346 (359)
T cd03823 275 NFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRSI---- 346 (359)
T ss_pred CCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhhH----
Confidence 99999999999999999999999999999999999999999999999997665 7999999999999887633
Q ss_pred HHHHHHHHHHHH
Q 003655 754 KIYSQRLLTLTG 765 (805)
Q Consensus 754 ~~~a~rll~Ly~ 765 (805)
+.++++++++|+
T Consensus 347 ~~~~~~~~~~~~ 358 (359)
T cd03823 347 EDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 57
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=2.1e-32 Score=309.13 Aligned_cols=278 Identities=15% Similarity=0.101 Sum_probs=193.2
Q ss_pred CCCceEEEEcCCCc---hHHH--H----HHHHHcCCcEEEEecCCCccc----CCCChhhhhhccc---c---c-----c
Q 003655 403 QGKPDLIIGNYSDG---NIVA--S----LLAHKLGVTQCTIAHALEKTK----YPDSDIYWKNLDD---K---Y-----H 458 (805)
Q Consensus 403 ~~kPDlIh~h~~~~---~lva--~----llar~lgip~v~t~H~l~~~k----~~~s~~~~~~~~~---~---y-----~ 458 (805)
..+|||||.|...+ ++.. . +..+..++|+|.|.|+.+... |...-..|+.-+. . | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 45799999988765 3321 1 112356799999999976432 1111112221110 0 1 1
Q ss_pred cc-----hhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCC
Q 003655 459 FS-----CQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP 533 (805)
Q Consensus 459 f~-----~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p 533 (805)
.+ .+...-..+.+.++.+|++|...++...+. .+ ..++.|||||+|+..+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~---------------------~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL---------------------YG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH---------------------cC--CCCEEEeCCCcCcccccc
Confidence 11 110011123345789999998876632211 11 458999999999754332
Q ss_pred CcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeec--cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCC
Q 003655 534 YTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARL--DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDR 611 (805)
Q Consensus 534 ~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL--~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~ 611 (805)
....... . .++++++|+++|+. .+.||++.+++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~~----------------------~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPPV----------------------R--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred ccccccc----------------------c--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 2211000 0 03467889999994 47899999999998763 579999999885
Q ss_pred CCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEE
Q 003655 612 RKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 691 (805)
Q Consensus 612 ~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVa 691 (805)
.. ...+|.++|... +..++..+|+. +|+||+||.+|+||++++||||||+|||+
T Consensus 282 ~~----------------------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVVa 335 (405)
T PRK10125 282 PF----------------------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVIA 335 (405)
T ss_pred cc----------------------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEEE
Confidence 31 024688898543 35688888885 99999999999999999999999999999
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 692 TCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDK----ISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 692 T~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~----ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
|+.||++|+|.++ +|++++|+|++++|+.+ ++...++ +.+++++++.++|||+.++++|+++|+.
T Consensus 336 t~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 336 THSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred eCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999775 99999999999999754 4444443 3466889998999999999999999963
No 58
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=3.2e-31 Score=284.45 Aligned_cols=272 Identities=21% Similarity=0.288 Sum_probs=212.7
Q ss_pred CCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~-~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+||++.. ...+.+.+.++. ++|.+++.|+............+ ..+...++.+|.+++.|..
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~ 145 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEG 145 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccchhHH-------------HHHHhhccccceEEEeccc
Confidence 37999999988 445555554444 89999999986443211110000 2245678899999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 562 (805)
..+.+.+.. +.+ ..++.+||||+|...+.+...... ..
T Consensus 146 ~~~~~~~~~-------------------~~~--~~~~~vi~~~~~~~~~~~~~~~~~---------------------~~ 183 (353)
T cd03811 146 VKEDLLKLL-------------------GIP--PDKIEVIYNPIDIEEIRALAEEPL---------------------EL 183 (353)
T ss_pred hhhhHHHhh-------------------cCC--ccccEEecCCcChhhcCcccchhh---------------------hc
Confidence 766332221 111 468999999999987765443211 01
Q ss_pred ccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 563 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 563 G~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
+. +.++++|+++||+.+.||++.+++++..+.+..++++|+++|+++. .+.+.+.++++++.++|.|
T Consensus 184 ~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~ 250 (353)
T cd03811 184 GI--PPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPL-----------REELEALAKELGLADRVHF 250 (353)
T ss_pred CC--CCCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCcc-----------HHHHHHHHHhcCCCccEEE
Confidence 22 5677899999999999999999999999988778999999999864 3556688899999999999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 722 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI 722 (805)
.|.. +++..+++. +|++++||.+|++|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+
T Consensus 251 ~g~~------~~~~~~~~~-~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~ 323 (353)
T cd03811 251 LGFQ------SNPYPYLKA-ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAA 323 (353)
T ss_pred eccc------CCHHHHHHh-CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHH
Confidence 9942 357788885 999999999999999999999999999999999999999999999999999999986444
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHhCC
Q 003655 723 VDFFEKCKADPSYWDKISLGGLKRIEEKYT 752 (805)
Q Consensus 723 ~~~l~~l~~dp~~~~~ms~~ar~~v~e~ys 752 (805)
.. +..+..+++.+++++.++++.+.++|+
T Consensus 324 ~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 324 LA-LLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HH-HHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 33 356779999999999999999888886
No 59
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=4.4e-32 Score=305.42 Aligned_cols=283 Identities=15% Similarity=0.158 Sum_probs=205.2
Q ss_pred CCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCCcccCCCCh--hhhhhcccccccc--hhhhHhHHHhhcCCEEEe
Q 003655 404 GKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYPDSD--IYWKNLDDKYHFS--CQFTADLIAMNHTDFIIT 478 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~lla-r~lgip~v~t~H~l~~~k~~~s~--~~~~~~~~~y~f~--~~~~~e~~a~~~AD~IIt 478 (805)
.++|+||+++.... ..+. +..++|.+++.|+.+...+.... ..+. ....|+.. .....|+.+++.+|.|++
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 58999999875442 2222 34689999999986432211000 0000 00011110 011246778899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhh
Q 003655 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 479 ~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 558 (805)
+|+.+.+.+++.. +.. ..++.+||||+|.+.|.|......
T Consensus 179 ~S~~~~~~l~~~~-------------------~~~--~~~v~vipngvd~~~f~~~~~~~~------------------- 218 (397)
T TIGR03087 179 VSRAEAELFRRLA-------------------PEA--AGRITAFPNGVDADFFSPDRDYPN------------------- 218 (397)
T ss_pred cCHHHHHHHHHhC-------------------CCC--CCCeEEeecccchhhcCCCccccC-------------------
Confidence 9998877433221 111 458999999999988866432110
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHH----HHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhc
Q 003655 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLV----EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY 634 (805)
Q Consensus 559 ~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~Ll----eA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~ 634 (805)
.+ .+++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +. ++++
T Consensus 219 ----~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~------------~~----~~~l 276 (397)
T TIGR03087 219 ----PY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS------------PA----VRAL 276 (397)
T ss_pred ----CC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh------------HH----HHHh
Confidence 01 34568999999999999999988 56666766779999999999964 12 2233
Q ss_pred CCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC
Q 003655 635 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 713 (805)
Q Consensus 635 ~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~-~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~ 713 (805)
+..++|+|+| .++ ++..+++. +|++|+||. .||+|++++||||||+|||+|+.|+. .+...+++|++++ +
T Consensus 277 ~~~~~V~~~G----~v~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~ 347 (397)
T TIGR03087 277 AALPGVTVTG----SVA--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-A 347 (397)
T ss_pred ccCCCeEEee----ecC--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-C
Confidence 4457899999 443 57888885 999999997 69999999999999999999987643 3444456799886 8
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 714 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
|+++++++|.+++ +|++.+++|+++|++++.++|||+..++++.+++.
T Consensus 348 ~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 348 DPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred CHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 9999999996655 89999999999999999999999999999999875
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=1.5e-31 Score=308.78 Aligned_cols=280 Identities=21% Similarity=0.245 Sum_probs=212.0
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCCh--hhhhhcccccccchhhhHhHHHhhcCCEEEecC
Q 003655 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSD--IYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 403 ~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~--~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 480 (805)
..++||+|++.+.....+ ++.....+|.++++|+-+........ ..|... |.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~---y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWNNY---YEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHHH---HHH------HHhchhhCCEEEECC
Confidence 358999999776653333 44556689999999985432211111 112211 111 122456889999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003655 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 481 ~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 560 (805)
+...+.+.+.+++|. .. .+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~~----------------~~--~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKYY----------------NI--EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhhc----------------CC--CCcEEEEcCCCcccccCccc-------------------------
Confidence 887665444443331 11 56899999998755443210
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcE
Q 003655 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 561 ~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V 640 (805)
...+..|+++||+.+.||++.|++|+.++.+..|+++|+|+|+|+. .+.++++++++++.++|
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~l~~~V 378 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE-----------KQKLQKIINENQAQDYI 378 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 2344689999999999999999999999998889999999999953 46788999999999999
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECC----CC-
Q 003655 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDP----YH- 714 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G-G~~EiI~dg~~G~l~~p----~d- 714 (805)
.|+| ..+ +..+++ .+|++|+||..||||++++||||||+|||+|+.+ |++|+|++|.+|+++++ +|
T Consensus 379 ~f~G----~~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~ 450 (500)
T TIGR02918 379 HLKG----HRN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDE 450 (500)
T ss_pred EEcC----CCC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccch
Confidence 9999 433 445556 5999999999999999999999999999999986 89999999999999974 33
Q ss_pred ---HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 715 ---GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 715 ---~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
++++|++|.++ ++ ++.+++|+++|++.+ ++|||+.++++|.++++.
T Consensus 451 ~~~~~~la~~I~~l----l~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 451 DQIITALAEKIVEY----FN-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVRE 499 (500)
T ss_pred hHHHHHHHHHHHHH----hC-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhh
Confidence 67777777554 44 557999999999976 889999999999998753
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=100.00 E-value=9.5e-31 Score=296.06 Aligned_cols=276 Identities=16% Similarity=0.205 Sum_probs=219.4
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCc-EEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecC
Q 003655 403 QGKPDLIIGNYSDG-NIVASLLAHKLGVT-QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 403 ~~kPDlIh~h~~~~-~lva~llar~lgip-~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 480 (805)
..++|++|++.... +..+.+++++.+.+ ++.++|+..... ......+. .....+++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 35789999865554 45556677777776 899999753211 01111111 11234678999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003655 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 481 ~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 560 (805)
....+.+++..+ .. ..++.+++||+|...+.+...
T Consensus 192 ~~~~~~l~~~~~-------------------~~--~~ki~vi~~gv~~~~~~~~~~------------------------ 226 (407)
T cd04946 192 EQGRNYLQKRYP-------------------AY--KEKIKVSYLGVSDPGIISKPS------------------------ 226 (407)
T ss_pred HHHHHHHHHHCC-------------------Cc--cccEEEEECCcccccccCCCC------------------------
Confidence 988775443322 11 568899999999876543210
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC--CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCC
Q 003655 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 638 (805)
Q Consensus 561 ~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~--~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~ 638 (805)
..+++.|+++||+.+.||++.+++|+.++.+.+| ++.++++|+|+. .+.+++++++.+..+
T Consensus 227 ------~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~~~~ 289 (407)
T cd04946 227 ------KDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKPENI 289 (407)
T ss_pred ------CCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcCCCc
Confidence 3457789999999999999999999999988776 467788999854 456788888888888
Q ss_pred cEEEecCCCCcCChHHHHHHHHc-cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC-CHH
Q 003655 639 QFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY-HGE 716 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~ia~-aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~-d~e 716 (805)
+|.|+| .++.+++.++++. .+|+||.||..||||++++||||||+|||||+.||..|+|.++++|+++++. |++
T Consensus 290 ~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~ 365 (407)
T cd04946 290 SVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPN 365 (407)
T ss_pred eEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHH
Confidence 999999 7888999999974 3789999999999999999999999999999999999999999999999874 899
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003655 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll 761 (805)
+++++|.+++ +||+.+++|+++|++.+.++|||+...+++.
T Consensus 366 ~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 366 ELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999997665 7999999999999999999999999988775
No 62
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.8e-29 Score=284.73 Aligned_cols=438 Identities=17% Similarity=0.170 Sum_probs=292.5
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeec-
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY- 355 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~- 355 (805)
|||+.+|.-..| --++||+...+- .|.+.|++.|++|+ |+.+.++... ..+....+.+.
T Consensus 1 M~Il~v~~E~~p-------~vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~~~-~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFP-------FVKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPKVQ-KEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecC-------ccccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchhhh-hhhccccceeeE
Confidence 788888776653 357899998888 66677899999999 8888776322 22222111111
Q ss_pred ------CccCeEEEEecccc--CCcc-cc--cccccc--cchhh---HHHHHH--HHHHHHHHHcC--CCceEEEEcCCC
Q 003655 356 ------GTKYSDILRVPFRT--EKGV-VR--KWISRF--EVWPY---LETYTE--DVAVEIAKELQ--GKPDLIIGNYSD 415 (805)
Q Consensus 356 ------~~~~v~I~rvp~~~--~~~~-~~--~~isr~--~i~~~---l~~f~~--~~~~~i~~~l~--~kPDlIh~h~~~ 415 (805)
+.....+....... -.-+ +. ....|. ..+.+ .++|+. .+.-++..... ..|||||+|.|.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWq 140 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQ 140 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHH
Confidence 00111111111100 0000 00 011110 11111 122222 22223332322 379999999999
Q ss_pred chHHHHHHHHH----cCCcEEEEecCCCcccCCC-Chhhhhhccc-ccc-----cchhhhHhHHHhhcCCEEEecCHHHH
Q 003655 416 GNIVASLLAHK----LGVTQCTIAHALEKTKYPD-SDIYWKNLDD-KYH-----FSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 416 ~~lva~llar~----lgip~v~t~H~l~~~k~~~-s~~~~~~~~~-~y~-----f~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
.+++..+++.. ..+|.|+|+|++....... .-..+..+.. .|. +..+..-.+-.+..||.|.|+|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 99999999984 4799999999976544322 1111111110 011 11223335567889999999999888
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhcc
Q 003655 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCV 564 (805)
Q Consensus 485 ~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~ 564 (805)
.........++ +.|+. .....++.-|-||+|.+.+.|.++.......-+........|+....+++|+
T Consensus 221 ~Ei~t~~~g~g------l~g~l------~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 221 GEIYTPEYGEG------LEGLL------SWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred Hhhcccccccc------chhhh------hhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 75542111111 11111 1113578899999999999998765322111112222355567788899999
Q ss_pred ccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEec
Q 003655 565 LKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 565 l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG 644 (805)
..+.+.|++.++||+..+||++.+++++..+.+.. +++++.|.|.. .....+..+++.+.. ++...-
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~---------~le~~~~~la~~~~~--~~~~~i 355 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP---------ELEEALRALASRHPG--RVLVVI 355 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH---------HHHHHHHHHHHhcCc--eEEEEe
Confidence 76778899999999999999999999999998854 99999999932 456778888888764 454443
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CceEEEECCCCHH
Q 003655 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--------GKSGYHIDPYHGE 716 (805)
Q Consensus 645 ~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~d--------g~~G~l~~p~d~e 716 (805)
..+ ..+.+.+...+|++++||++|+||++-++||..|+++|++.+||.+|.|.+ ..+||++.+.|++
T Consensus 356 ----~~~-~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~ 430 (487)
T COG0297 356 ----GYD-EPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPD 430 (487)
T ss_pred ----eec-HHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHH
Confidence 233 344444444699999999999999999999999999999999999999986 5799999999999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
+++.+|.+++.-....+..|+.+..++.. ..|+|+..+++|.++|+..
T Consensus 431 ~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 431 HLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 99999999875444555559999999887 6899999999999999864
No 63
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=2.4e-29 Score=281.12 Aligned_cols=318 Identities=12% Similarity=0.065 Sum_probs=212.4
Q ss_pred HHHHHHHHCCC-ccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccccccchh---hHHHH-
Q 003655 316 EMLLRIKQQGL-DITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWP---YLETY- 390 (805)
Q Consensus 316 eLa~~L~~~Gh-~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~---~l~~f- 390 (805)
+++.+|+++|| +|+ |++.... +. ........+++|+++|. +... .. . ..++. |+...
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~---~~-----~~~~~~~~~v~v~r~~~-~~~~--~~-~--~~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGS---EP-----IPALLNHPSIHIHLMVQ-PRLL--QR-L--PRVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCC---CC-----CHHHhcCCcEEEEECCC-cccc--cc-c--ccchHHHHHHHHHH
Confidence 35566788886 699 8874321 11 11112234689999976 3210 00 1 11222 22211
Q ss_pred --HHHHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhH
Q 003655 391 --TEDVAVEIAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTA 465 (805)
Q Consensus 391 --~~~~~~~i~~~l~~kPDlIh~h~~~~---~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~ 465 (805)
.......+. ....+||+||+|.+.. .+.+.++++..++|++++.|++........ .........+.. ..
T Consensus 85 ~~~~~~~~~~~-~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---~~~~~~~~~~~~--~~ 158 (371)
T PLN02275 85 IQFLMLLWFLC-VKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALS---LGRSHPLVRLYR--WY 158 (371)
T ss_pred HHHHHHHHHHH-hhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcc---cCCCCHHHHHHH--HH
Confidence 111111111 1235899999987553 456677788889999999998632110000 000000111111 23
Q ss_pred hHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCc
Q 003655 466 DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFH 545 (805)
Q Consensus 466 e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~ 545 (805)
++..++.+|.||++|+...+.+.+. .|+ ++.+||||+ .+.|.|......
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~------ 207 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR------ 207 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc------
Confidence 6778899999999999887633221 122 278999985 456655432110
Q ss_pred hhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH-----------------ccCCCeEEEEEe
Q 003655 546 PEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA-----------------KLRELVNLVVVG 608 (805)
Q Consensus 546 ~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~-----------------~~~~~v~LvIVG 608 (805)
+ .++...+++++||+.+.||++.+++|+..+. +..|+++|+|+|
T Consensus 208 ------------------~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG 268 (371)
T PLN02275 208 ------------------L-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITG 268 (371)
T ss_pred ------------------c-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEe
Confidence 0 0223457889999999999999999998874 235789999999
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCC---CCCCCcHHHHHHHHc
Q 003655 609 GDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA---LYEAFGLTVVEAMTC 685 (805)
Q Consensus 609 ~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS---~~E~fGltvlEAMA~ 685 (805)
+|+. .+++++.++++++.+ +.|.+. .++.+++..+|+. +|++|.|+ ..|+||++++|||||
T Consensus 269 ~G~~-----------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~ 332 (371)
T PLN02275 269 KGPQ-----------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGC 332 (371)
T ss_pred CCCC-----------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHC
Confidence 9975 467889999999976 887651 4678999999995 99999863 248999999999999
Q ss_pred CCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHH
Q 003655 686 GLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 725 (805)
Q Consensus 686 GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~ 725 (805)
|+|||+|+.||.+|+|+++.+|++++ |++++|++|.++
T Consensus 333 G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 333 GLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 99999999999999999999999996 689999998654
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=3.2e-29 Score=278.39 Aligned_cols=273 Identities=22% Similarity=0.285 Sum_probs=212.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCC-hhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS-DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s-~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.++|+||++....... .++......+.+.++|+.+....... ...|+.. +. .....++.+|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNF---YE------YVFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccchh---hH------HHHhChhhCCEEEEccHH
Confidence 5899999987765333 23444455677889997543221111 0111111 11 112246789999999988
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 562 (805)
..+.+.+.++ . ..++.+||||++...+.+....
T Consensus 168 ~~~~l~~~~~-------------------~---~~~v~~ip~g~~~~~~~~~~~~------------------------- 200 (372)
T cd04949 168 QKQDLQKQFG-------------------N---YNPIYTIPVGSIDPLKLPAQFK------------------------- 200 (372)
T ss_pred HHHHHHHHhC-------------------C---CCceEEEcccccChhhcccchh-------------------------
Confidence 7764433321 0 2348899999998776553200
Q ss_pred ccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 563 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 563 G~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
...+..|+++||+.+.||++.+++++.++.+..|+++|+|+|.|+. ...+..+++++++.++|.|
T Consensus 201 ----~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~ 265 (372)
T cd04949 201 ----QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE-----------EEKLKELIEELGLEDYVFL 265 (372)
T ss_pred ----hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch-----------HHHHHHHHHHcCCcceEEE
Confidence 3456789999999999999999999999998889999999999964 3456777788999999999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHH
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEI 721 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G-G~~EiI~dg~~G~l~~p~d~e~lA~a 721 (805)
.|.. .++.++++. +|++|.||..|+||++++|||+||+|||+++.| |+.++|.++.+|++++++|+++++++
T Consensus 266 ~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~ 338 (372)
T cd04949 266 KGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEA 338 (372)
T ss_pred cCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHH
Confidence 9932 357888885 999999999999999999999999999999987 89999999999999999999999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003655 722 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRL 760 (805)
Q Consensus 722 I~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rl 760 (805)
|.+++ +|++.+++|+++|++.+ ++|||+.++++|
T Consensus 339 i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 339 IIELL----NDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 97665 89999999999999995 899999998864
No 65
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=1.8e-29 Score=278.30 Aligned_cols=263 Identities=20% Similarity=0.265 Sum_probs=190.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhh------hhhcccccccchhhhHhHHHhhcCCEEE
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIY------WKNLDDKYHFSCQFTADLIAMNHTDFII 477 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~------~~~~~~~y~f~~~~~~e~~a~~~AD~II 477 (805)
.++|+||++.+.. +..+.+..++|.+..+|+.....+...+.+ +......+.+......+..+++++|.|+
T Consensus 82 ~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 158 (351)
T cd03804 82 SGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFI 158 (351)
T ss_pred cCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 5899999876432 222224567888888887321111100000 0000000001111123556789999999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhh
Q 003655 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (805)
Q Consensus 478 t~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 557 (805)
++|....+.+.+. +..+..+|+||+|.+.|.+..
T Consensus 159 ~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~---------------------- 192 (351)
T cd03804 159 ANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE---------------------- 192 (351)
T ss_pred ECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC----------------------
Confidence 9999887643221 133567999999987765422
Q ss_pred hhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCC
Q 003655 558 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN 637 (805)
Q Consensus 558 ~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~ 637 (805)
..++.++++||+.+.||++.+++|+.++ + ++|+|+|+|+. .+.+++ +..
T Consensus 193 ----------~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~~l~ivG~g~~-----------~~~l~~-----~~~ 241 (351)
T cd03804 193 ----------EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-KRLVVIGDGPE-----------LDRLRA-----KAG 241 (351)
T ss_pred ----------CCCCEEEEEEcCccccChHHHHHHHHHC----C-CcEEEEECChh-----------HHHHHh-----hcC
Confidence 2345799999999999999999999876 3 78999999954 122332 456
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~ 717 (805)
++|+|+| .++.+++..+++. +|++++||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+++
T Consensus 242 ~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~ 315 (351)
T cd03804 242 PNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVES 315 (351)
T ss_pred CCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHH
Confidence 8999999 7888999999995 999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003655 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRL 760 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rl 760 (805)
++++|.+++ +|++ .+.+++++++ ++|+|+.+.+++
T Consensus 316 la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 316 LAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 999996665 6774 2344455555 579999998875
No 66
>PHA01630 putative group 1 glycosyl transferase
Probab=99.97 E-value=9.3e-29 Score=272.06 Aligned_cols=258 Identities=15% Similarity=0.136 Sum_probs=189.5
Q ss_pred EcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHH-hhcCCEEEecCHHHHhhccc
Q 003655 411 GNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA-MNHTDFIITSTFQEIAGSKD 489 (805)
Q Consensus 411 ~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~~~~~~~~~ 489 (805)
.|+....+.++...++.|+|+++++|+... ... ..+... .+.+|.||++|....+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~------------------l~~--~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA------------------ISH--TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech------------------hhH--HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 344334455555556678999999997210 000 112344 67899999999888763221
Q ss_pred cccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCC
Q 003655 490 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRN 569 (805)
Q Consensus 490 ~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~ 569 (805)
.|++. ..++.+||||+|.+.|.|.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12321 3489999999999887654211 124
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCc
Q 003655 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 570 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~ 649 (805)
+.++++.|++.+.||++.|++|++.+.+..+++.|+++|++... .++ .++.+ +.| .
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~-----------~~l------~~~~~---~~~----~ 197 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD-----------PRL------FGLNG---VKT----P 197 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc-----------hhh------ccccc---eec----c
Confidence 45777888999999999999999999887789999999976431 111 12222 234 5
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC-----------------
Q 003655 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP----------------- 712 (805)
Q Consensus 650 v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p----------------- 712 (805)
++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|+|.++.+|+++++
T Consensus 198 v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~ 276 (331)
T PHA01630 198 LPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF 276 (331)
T ss_pred CCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccc
Confidence 778999999995 99999999999999999999999999999999999999999988887753
Q ss_pred --CCHHHHHHHHHHHHHHhhCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 713 --YHGEQAAEILVDFFEKCKAD--PSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 713 --~d~e~lA~aI~~~l~~l~~d--p~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
.|.+++++++.+++ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 277 v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 277 LDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred cCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 26788888886655 44 24445555555555679999999999999999754
No 67
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.96 E-value=1.1e-27 Score=274.85 Aligned_cols=273 Identities=11% Similarity=0.082 Sum_probs=195.2
Q ss_pred CCceEEEEcCCCc-hHH--HHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHh-hcCCEEEec
Q 003655 404 GKPDLIIGNYSDG-NIV--ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM-NHTDFIITS 479 (805)
Q Consensus 404 ~kPDlIh~h~~~~-~lv--a~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~-~~AD~IIt~ 479 (805)
..|||||.+.+.. ++. |..+|++++ |+|.++|+-...........+ + . .+..+. ...+.. .++|.|+++
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~~g~--L-~--~~llk~-l~~~v~r~hcD~VIaP 505 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKNGA--L-Q--AFFVKH-INNWVTRAYCHKVLRL 505 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhcchh--H-H--HHHHHH-HHHHHHHhhCCEEEcC
Confidence 4799999998875 677 888999999 899999985332101000000 0 0 000000 011111 128999999
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhh
Q 003655 480 TFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 559 (805)
Q Consensus 480 S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~ 559 (805)
|..... . . ...+..| ||||++.|.|......+
T Consensus 506 S~atq~-L-------------------------~--~~vI~nV-nGVDte~F~P~~r~~~~------------------- 537 (794)
T PLN02501 506 SAATQD-L-------------------------P--KSVICNV-HGVNPKFLKIGEKVAEE------------------- 537 (794)
T ss_pred CHHHHH-h-------------------------c--ccceeec-ccccccccCCcchhHHH-------------------
Confidence 965543 0 0 1112222 69999999887553221
Q ss_pred hhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCc
Q 003655 560 EHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 639 (805)
Q Consensus 560 ~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~ 639 (805)
..+|+ +...+.++|+|||.+.||++.|++|++.+.+..++++|+|+|+|+. .+++++++.++++ +
T Consensus 538 r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~-----------reeLe~la~eLgL--~ 602 (794)
T PLN02501 538 RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED-----------AHEVQRAAKRLDL--N 602 (794)
T ss_pred HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc-----------HHHHHHHHHHcCC--E
Confidence 22444 3333558999999999999999999999887778999999999976 4677888888887 4
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHH
Q 003655 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAA 719 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA 719 (805)
|.|+|.+. +...+|+ ++|+||+||.+|+||++++||||||+|||+|+.||. +++.++.+|+++ +|.++++
T Consensus 603 V~FLG~~d------d~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafA 672 (794)
T PLN02501 603 LNFLKGRD------HADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFV 672 (794)
T ss_pred EEecCCCC------CHHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHH
Confidence 99999433 2345677 599999999999999999999999999999999985 457778888875 6899999
Q ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 720 EILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 720 ~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
++|.+++ .|+..+..+.+ ...|||+..++++++..+.
T Consensus 673 eAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 673 AKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 9997766 66654433321 2489999999999997654
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.95 E-value=2.1e-26 Score=262.37 Aligned_cols=335 Identities=15% Similarity=0.148 Sum_probs=208.5
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCCcccCC--C-Chhh-------hhhcccccccchhhhHhHHHhh
Q 003655 403 QGKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYP--D-SDIY-------WKNLDDKYHFSCQFTADLIAMN 471 (805)
Q Consensus 403 ~~kPDlIh~h~~~~~lva~lla-r~lgip~v~t~H~l~~~k~~--~-s~~~-------~~~~~~~y~f~~~~~~e~~a~~ 471 (805)
..++||+|+|.|..+..+..++ +..++|.|+|.|+.+...+. . .+.+ +..--....+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 3689999999999988888888 55789999999997655531 1 1111 1111112233445556889999
Q ss_pred cCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHh
Q 003655 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (805)
Q Consensus 472 ~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~ 551 (805)
.||.++|+|..+...+...++ .+ +++ |||||+|.+.|.+..+.......-+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll~-------------------~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLLK-------------------RK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHhC-------------------CC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 999999999998876554432 22 334 9999999999977654322111111111111
Q ss_pred hcchhhhhhhhccccCCCCcEEEE-EeeccC-CCCHHHHHHHHHHhHcc----CCC---eEEEEEeCCCC---CCCccHH
Q 003655 552 LYSDVENKEHLCVLKDRNKPILFT-MARLDR-VKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRR---KESKDLE 619 (805)
Q Consensus 552 l~~~~~~~~~lG~l~~~~k~iIl~-vGRL~~-~Kgi~~LleA~~~l~~~----~~~---v~LvIVG~g~~---~~~~d~e 619 (805)
.....+.++++ ++++++++| +||++. .||++.+++|++++... ..+ +-|+++=.+.. .++-...
T Consensus 283 --~~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~ 358 (590)
T cd03793 283 --VRGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQ 358 (590)
T ss_pred --HHHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcch
Confidence 11123455676 677888777 799998 99999999999998641 222 33444433311 0000000
Q ss_pred H-----HHHHH------------------------------------------------------------HHHHHHHhc
Q 003655 620 E-----QAEMK------------------------------------------------------------KMYSLIDQY 634 (805)
Q Consensus 620 e-----~~e~~------------------------------------------------------------~l~~li~~~ 634 (805)
. .+-++ .+-..+.+.
T Consensus 359 ~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~ 438 (590)
T cd03793 359 AVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRI 438 (590)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHh
Confidence 0 00000 111112222
Q ss_pred CCCC----c--EEEecC---CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----cccc
Q 003655 635 KLNG----Q--FRWISS---QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEII 701 (805)
Q Consensus 635 ~L~~----~--V~flG~---~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~----~EiI 701 (805)
+|.+ + |.|+.. .+|.+-..+.+.+++. +|++|+||.+|+||++++||||||+|||+|+.+|. .|++
T Consensus 439 ~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g-~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 439 QLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG-CHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred cCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh-ceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh
Confidence 2322 2 455441 2223334456777774 99999999999999999999999999999999998 5666
Q ss_pred ccC-ceEEEECCCCH---HHHHHHHHHHHHHhhCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 003655 702 VNG-KSGYHIDPYHG---EQAAEILVDFFEKCKADPSYWDKISLGGL-KRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 702 ~dg-~~G~l~~p~d~---e~lA~aI~~~l~~l~~dp~~~~~ms~~ar-~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
.++ ..|+.+.+.+. .+.++.|.+++.++.+. +.++.+.++++ ++..+.|+|+..++.|.+-|..
T Consensus 518 ~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 518 EDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred ccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 554 35777763222 33334444444444444 56777777655 3344889999999999998764
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=1.9e-25 Score=247.70 Aligned_cols=343 Identities=15% Similarity=0.120 Sum_probs=233.4
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecC
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||+|++. | +||.+.... +|++.|.++||+|+ ++|.... .. ....+.
T Consensus 2 ~~i~i~~~-g------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~-~~----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGG-G------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARG-ME----ARLVPK--- 48 (357)
T ss_pred cEEEEEcC-c------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCc-hh----hhcccc---
Confidence 88888752 2 267777777 67777899999999 8886421 00 001111
Q ss_pred ccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHc-CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003655 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKEL-QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l-~~kPDlIh~h~~~~~lva~llar~lgip~v~t~ 435 (805)
.++.+++++.....+ .+..........+... ...+.+.+ ..+||+||+|.+..++.+.++++..++|++++.
T Consensus 49 -~g~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~-~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 49 -AGIEFHFIPSGGLRR-----KGSLANLKAPFKLLKG-VLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred -CCCcEEEEeccCcCC-----CChHHHHHHHHHHHHH-HHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 356777777643111 0000000001111111 11222222 247999999988777888888888999999876
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003655 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~ 515 (805)
|.... . ...++.++.+|.+++++++... . ++
T Consensus 122 ~~~~~-----------~-----------~~~r~~~~~~d~ii~~~~~~~~---------------------~----~~-- 152 (357)
T PRK00726 122 QNAVP-----------G-----------LANKLLARFAKKVATAFPGAFP---------------------E----FF-- 152 (357)
T ss_pred CCCCc-----------c-----------HHHHHHHHHhchheECchhhhh---------------------c----cC--
Confidence 64211 0 1134567789999998864321 0 12
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHH-HHHHH
Q 003655 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLV-EWYGK 594 (805)
Q Consensus 516 ~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~Ll-eA~~~ 594 (805)
..++.+|+||+|.+.+.+.... .++++ +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 5689999999998766542211 12344 45678889999988888876555 99988
Q ss_pred hHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCC
Q 003655 595 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 674 (805)
Q Consensus 595 l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~ 674 (805)
+.+. + ..++++|+|.. +.+.+..+ +++. |.+.|+ + +++..+|+. +|++|.+|-
T Consensus 209 ~~~~-~-~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~----~--~~~~~~~~~-~d~~i~~~g--- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPF----I--DDMAAAYAA-ADLVICRAG--- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeeh----H--hhHHHHHHh-CCEEEECCC---
Confidence 8653 3 56788898853 33444445 6663 999994 3 478888885 999999762
Q ss_pred CcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003655 675 FGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 675 fGltvlEAMA~GlPVVaT~~GG--------~~EiI~dg~~G~l~~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
+.+++|||+||+|+|++..++ ..+.+.+..+|+++++.| +++++++|.+++ +|++.+++|+++++
T Consensus 262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~ 336 (357)
T PRK00726 262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAAR 336 (357)
T ss_pred -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHHH
Confidence 689999999999999987653 235677778999999888 999999996655 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q 003655 745 KRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 745 ~~v~e~ysw~~~a~rll~Ly~ 765 (805)
+++ +.++-+.+++.++++.+
T Consensus 337 ~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 337 ALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred hcC-CcCHHHHHHHHHHHHhh
Confidence 986 88999999999988754
No 70
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=2.8e-25 Score=243.09 Aligned_cols=224 Identities=15% Similarity=0.154 Sum_probs=168.2
Q ss_pred HhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhh
Q 003655 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEI 548 (805)
Q Consensus 469 a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i 548 (805)
.|.+.+.+||+|...++.+.+ .|++ . .+ +|+||+|.+.|.|.......
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~-------- 136 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--V-DL-PVFHGINFKIVENAEKLVPQ-------- 136 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--C-ce-eeeCCCChhhcCccchhhHH--------
Confidence 456677899999887764322 2443 2 23 47899999998875422111
Q ss_pred HHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHH
Q 003655 549 EELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEM 624 (805)
Q Consensus 549 ~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~~e~ 624 (805)
.++.++.. .++.++|+++||+++.||++.|++|++++.+..++ ++|+++|++
T Consensus 137 ---------~r~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 137 ---------LKQKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ---------HHHHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 11223321 14678899999999999999999999999876664 578888732
Q ss_pred HHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccc--
Q 003655 625 KKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV-- 702 (805)
Q Consensus 625 ~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~-- 702 (805)
..+++++.++|+|+|... .++.+++.++|+. +|+||+||.+|+||++++||||||+|||+|+.||..|++.
T Consensus 193 -----~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~ 265 (335)
T PHA01633 193 -----QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQ 265 (335)
T ss_pred -----HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCc
Confidence 124567888999995322 5567899999995 9999999999999999999999999999999999988743
Q ss_pred --------------c--CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003655 703 --------------N--GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 703 --------------d--g~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll 761 (805)
+ ...||.+++.|++++|++|..+++. .|++. .+.++++++ ++|+|+.++++|+
T Consensus 266 ~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~---~~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 266 WNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREE---RSMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred cceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhh---hhHHHHHHH-HhcCHHHHHHHhh
Confidence 1 2257789899999999999877531 34433 367777776 8999999999886
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=1.5e-25 Score=257.25 Aligned_cols=322 Identities=14% Similarity=0.084 Sum_probs=216.8
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhh
Q 003655 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMN 471 (805)
Q Consensus 393 ~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 471 (805)
.....+....+ ..|+|+.|.....+++.++.++ ...|+++..|... +.+.. |..+- .+ ..-...+-
T Consensus 120 ~fa~~i~~~~~-~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~Hipf----P~~e~-~~~lp------~~-~~ll~~~l 186 (460)
T cd03788 120 KFADAIAEVLR-PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPF----PSSEI-FRCLP------WR-EELLRGLL 186 (460)
T ss_pred HHHHHHHHhcC-CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCC----CChHH-HhhCC------Ch-HHHHHHHh
Confidence 34444444433 6799999999877777777654 4589999999753 22222 21111 00 11123566
Q ss_pred cCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHh
Q 003655 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (805)
Q Consensus 472 ~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~ 551 (805)
.+|.|...+........+.....-.. ..+. .......|. ..++.++|||||.+.|.+........
T Consensus 187 ~~D~igF~t~~~~~~Fl~~~~~~l~~-~~~~-~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~---------- 251 (460)
T cd03788 187 GADLIGFQTERYARNFLSCCSRLLGL-EVTD-DGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQ---------- 251 (460)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHcCC-cccC-CceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhH----------
Confidence 79999988876544322211000000 0000 000111111 34688999999998886542211100
Q ss_pred hcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHHH
Q 003655 552 LYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKKM 627 (805)
Q Consensus 552 l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~~e~~~l 627 (805)
...++..+. .+++++|+++||+++.||++.+++|+.++.+.+|+ +.|+++|++... ...+.....+++
T Consensus 252 ----~~~~~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g--~~~~~~~l~~~l 323 (460)
T cd03788 252 ----ERAAELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRT--DVPEYQELRREV 323 (460)
T ss_pred ----HHHHHHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCc--CcHHHHHHHHHH
Confidence 000112333 46788999999999999999999999998877775 679999865321 112223445566
Q ss_pred HHHHHhcCCC------CcEEEe-cCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCccc
Q 003655 628 YSLIDQYKLN------GQFRWI-SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGG 696 (805)
Q Consensus 628 ~~li~~~~L~------~~V~fl-G~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlP----VVaT~~GG 696 (805)
.+++++++.. ..|+++ | .++.+++..+|+. +|+||+||..||||++++||||||+| ||+|+.+|
T Consensus 324 ~~~v~~in~~~g~~~~~~v~~~~g----~v~~~el~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G 398 (460)
T cd03788 324 EELVGRINGKFGTLDWTPVRYLYR----SLPREELAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG 398 (460)
T ss_pred HHHHHHHHhccCCCCceeEEEEeC----CCCHHHHHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEecccc
Confidence 6666654321 235554 5 6788999999995 99999999999999999999999999 99999998
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003655 697 PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 697 ~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~ 762 (805)
..+. +.+|++++|.|++++|++|.++++ .+++.++++++++++.+ ++|||+.++++++.
T Consensus 399 ~~~~---~~~g~lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 399 AAEE---LSGALLVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred chhh---cCCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 8877 467999999999999999977662 35688999999999998 78999999999875
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=2.1e-24 Score=237.73 Aligned_cols=324 Identities=14% Similarity=0.127 Sum_probs=220.9
Q ss_pred CcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccc
Q 003655 298 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKW 377 (805)
Q Consensus 298 dtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~ 377 (805)
.+||...++. .|++.|.++||+|+ |+|...... .+. ....++++.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARL-VPKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhc-ccccCCceEEEEecCcCC-----
Confidence 3578888887 77778899999999 888653211 011 111356778887643211
Q ss_pred cccccchhhHHH---HHHH--HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhh
Q 003655 378 ISRFEVWPYLET---YTED--VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKN 452 (805)
Q Consensus 378 isr~~i~~~l~~---f~~~--~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~ 452 (805)
...+..+.. +... ....+.+ +.+||+||+|.+..++.+.++++..++|+++..|+... .
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~--~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~-----------~ 125 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK--KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP-----------G 125 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH--hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------c
Confidence 111111111 1111 1112222 24899999998777777788888999999876554210 0
Q ss_pred cccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCC
Q 003655 453 LDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF 532 (805)
Q Consensus 453 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~ 532 (805)
..+++.+..+|.|+++|+...+. ++ +.++.+|+||+|.+.+.
T Consensus 126 -----------~~~~~~~~~~~~vi~~s~~~~~~-------------------------~~--~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 -----------LANRLLARFADRVALSFPETAKY-------------------------FP--KDKAVVTGNPVREEILA 167 (350)
T ss_pred -----------HHHHHHHHhhCEEEEcchhhhhc-------------------------CC--CCcEEEECCCCchHHhh
Confidence 01334567799999999876541 11 56899999999987665
Q ss_pred CCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHH-HHHHHHHhHccCCCeEE-EEEeCC
Q 003655 533 PYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNL-VVVGGD 610 (805)
Q Consensus 533 p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~-LleA~~~l~~~~~~v~L-vIVG~g 610 (805)
+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++.+ +++|++
T Consensus 168 ~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4221 133555 667788888887777777654 5588888763 45664 466776
Q ss_pred CCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEE
Q 003655 611 RRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTF 690 (805)
Q Consensus 611 ~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVV 690 (805)
. .+++.+.++++ .++|+|.|+ + +++..+|+. +|++|.+|- +++++|||+||+|+|
T Consensus 222 -~-----------~~~l~~~~~~~--~~~v~~~g~----~--~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pvv 276 (350)
T cd03785 222 -D-----------LEEVKKAYEEL--GVNYEVFPF----I--DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPAI 276 (350)
T ss_pred -c-----------HHHHHHHHhcc--CCCeEEeeh----h--hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCEE
Confidence 2 24566666665 468999993 3 578888885 999998762 689999999999999
Q ss_pred EcCccc--------cccccccCceEEEECCC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003655 691 ATCKGG--------PAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 691 aT~~GG--------~~EiI~dg~~G~l~~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a 757 (805)
+++.++ ..+.+.++.+|+++++. |+++++++|.+++ +|++.+++|++++++++ +.+.-++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~ 348 (350)
T cd03785 277 LIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA-RPDAAERIA 348 (350)
T ss_pred EeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 987654 24667777899999987 8999999996665 89999999999999887 566665554
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=4.2e-24 Score=235.18 Aligned_cols=314 Identities=15% Similarity=0.124 Sum_probs=205.9
Q ss_pred HHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccccccchhhHHH---HHH
Q 003655 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLET---YTE 392 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~---f~~ 392 (805)
.|+++|.++||+|+ ++|+..... ... ....++.+.+++.....+ ......+..... ...
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~------~~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE------KRL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch------hcc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67788899999999 888532100 000 111356777777643211 001111111111 111
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhc
Q 003655 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (805)
Q Consensus 393 ~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 472 (805)
.+. .+.+ +.+||+||+|.+..++.+.++++..++|+|+..|.... . ..+++..+.
T Consensus 81 ~l~-~~i~--~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~-----~~~~~~~~~ 135 (348)
T TIGR01133 81 QAR-RILK--KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-----------------G-----LTNKLLSRF 135 (348)
T ss_pred HHH-HHHH--hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc-----------------c-----HHHHHHHHH
Confidence 222 2222 25899999998777777788888899998754332100 0 113456778
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhh
Q 003655 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELL 552 (805)
Q Consensus 473 AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l 552 (805)
+|.+++.|+.+.+. -+..+|+||+|...+.+...
T Consensus 136 ~d~ii~~~~~~~~~------------------------------~~~~~i~n~v~~~~~~~~~~---------------- 169 (348)
T TIGR01133 136 AKKVLISFPGAKDH------------------------------FEAVLVGNPVRQEIRSLPVP---------------- 169 (348)
T ss_pred hCeeEECchhHhhc------------------------------CCceEEcCCcCHHHhcccch----------------
Confidence 99999999876541 13368999998765543211
Q ss_pred cchhhhhhhhccccCCCCcEEEEEeeccCCCCHHH-HHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003655 553 YSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 631 (805)
Q Consensus 553 ~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~-LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li 631 (805)
++.+|+ ++++++|+++|+....|++.. +++|+..+.+. ++++++++++.+ .+++++.+
T Consensus 170 ------~~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~-----------~~~l~~~~ 228 (348)
T TIGR01133 170 ------RERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND-----------LEKVKNVY 228 (348)
T ss_pred ------hhhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch-----------HHHHHHHH
Confidence 122455 567889999998877888654 55888887653 456654444321 25667777
Q ss_pred HhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc-------cccccccC
Q 003655 632 DQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG-------PAEIIVNG 704 (805)
Q Consensus 632 ~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG-------~~EiI~dg 704 (805)
+++++.+.+.|.. .++..+|+. +|++|.+| + |++++|||+||+|+|+++.+| ..+++.++
T Consensus 229 ~~~~l~~~v~~~~--------~~~~~~l~~-ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~ 295 (348)
T TIGR01133 229 QELGIEAIVTFID--------ENMAAAYAA-ADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL 295 (348)
T ss_pred hhCCceEEecCcc--------cCHHHHHHh-CCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC
Confidence 7777755555542 157788884 99999875 2 789999999999999997754 23578889
Q ss_pred ceEEEECCCC--HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003655 705 KSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 705 ~~G~l~~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a 757 (805)
.+|++++++| +++++++|.+++ +||+.+++|++++++++ +...-++.+
T Consensus 296 ~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~ 345 (348)
T TIGR01133 296 GAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA-KPDAAKRIA 345 (348)
T ss_pred CCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC-CccHHHHHH
Confidence 9999998876 999999996655 89999999999998876 445444444
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.92 E-value=1.4e-23 Score=239.87 Aligned_cols=323 Identities=16% Similarity=0.184 Sum_probs=217.1
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHH
Q 003655 391 TEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA 469 (805)
Q Consensus 391 ~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~l-gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a 469 (805)
.......+....+ .-|+|..|.....+++.++.++. ..++.+..|.. ++.++++. .+ + +. ..-...
T Consensus 114 N~~fA~~i~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHip----fP~~e~f~-~l-p---~r---~~il~g 180 (456)
T TIGR02400 114 NRLFAEALAPLLQ-PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIP----FPSSEIYR-TL-P---WR---RELLEG 180 (456)
T ss_pred HHHHHHHHHHhCC-CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCC----CCChHHHh-hC-C---cH---HHHHHH
Confidence 3344445555443 45899999998878888887764 45777888854 33333221 11 1 11 112347
Q ss_pred hhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC--CCCcEEEecCCccCCCCCCCcHHHHhhhcCchh
Q 003655 470 MNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV--FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPE 547 (805)
Q Consensus 470 ~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~--~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~ 547 (805)
|-.||.|...|+..++.+.......- ++-....++.. ...++.++|||||++.|.+..........
T Consensus 181 ll~~dligF~t~~~~~~Fl~~~~~~l--------~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~---- 248 (456)
T TIGR02400 181 LLAYDLVGFQTYDDARNFLSAVSREL--------GLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKR---- 248 (456)
T ss_pred HhcCCEEEECCHHHHHHHHHHHHHHh--------CCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHH----
Confidence 88999999999888775544322100 00000011111 13478899999999988654321110000
Q ss_pred hHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHH
Q 003655 548 IEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAE 623 (805)
Q Consensus 548 i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~~e 623 (805)
. ...++.+ .++++|+++||+++.||+..+++|++++.+.+|+ +.|+++|+.... ...+....
T Consensus 249 ~-------~~lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg--~~~~~~~l 314 (456)
T TIGR02400 249 I-------AELRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRG--DVPEYQQL 314 (456)
T ss_pred H-------HHHHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCcc--CchHHHHH
Confidence 0 0111222 3678999999999999999999999998877775 568888643211 01122223
Q ss_pred HHHHHHHHHhcCC-CC-----cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcC
Q 003655 624 MKKMYSLIDQYKL-NG-----QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATC 693 (805)
Q Consensus 624 ~~~l~~li~~~~L-~~-----~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlP----VVaT~ 693 (805)
.+.+++++...+. .+ .|.+++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +|+|+
T Consensus 315 ~~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~ 390 (456)
T TIGR02400 315 RRQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSE 390 (456)
T ss_pred HHHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeC
Confidence 3344444332221 11 144544 2677899999999 599999999999999999999999999 99999
Q ss_pred ccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003655 694 KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 694 ~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~L 763 (805)
.+|..+.+. +|++++|.|++++|++|.++++ .+++.++++.+++++++ .+||+..+++++++-
T Consensus 391 ~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 391 FAGAAQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred CCCChHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 999988883 7999999999999999987763 57889999999999998 679999999998863
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=2.6e-23 Score=236.44 Aligned_cols=285 Identities=15% Similarity=0.117 Sum_probs=193.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.+||+||++.++........+++.|+|.+++-|.+... +...|+.+ . ...+..++.+|.|++.|+..
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~-------~--~~~r~~~~~~d~ii~~S~~~ 189 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKF-------K--RFYRLLFKNIDLVLAQSEED 189 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHH-------H--HHHHHHHHhCCEEEECCHHH
Confidence 37999998755532223334677899998876643211 11111111 1 12345788999999999988
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhc
Q 003655 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 563 (805)
Q Consensus 484 ~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG 563 (805)
.+.+.+ .|++ .. +.+++|+ +.+.+.+....... ...+..++
T Consensus 190 ~~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~---------------~~~r~~~~ 230 (425)
T PRK05749 190 AERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA---------------ATLRRQLA 230 (425)
T ss_pred HHHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH---------------HHHHHHhc
Confidence 763221 2443 44 7788884 33333222111110 01123333
Q ss_pred cccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEe
Q 003655 564 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI 643 (805)
Q Consensus 564 ~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~fl 643 (805)
+++++|+++|+. .|+.+.+++|+.++.+..|+++|+|+|+|+. ..++++++++++|+. .+.|.
T Consensus 231 ----~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ----PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ----CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh----------hHHHHHHHHHhCCCc-EEEcc
Confidence 356788888764 6889999999999887789999999999863 125688888888885 35555
Q ss_pred cCCCCc--------CChHHHHHHHHccCcEE-EeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-ceEEEECC
Q 003655 644 SSQMNR--------VRNGELYRYICDTKGAF-VQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNG-KSGYHIDP 712 (805)
Q Consensus 644 G~~~~~--------v~~~el~~~ia~aaDvf-V~PS~~E~fGltvlEAMA~GlPVVaT~~-GG~~EiI~dg-~~G~l~~p 712 (805)
|..... -..+++..+|+. +|++ +.+|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++.+
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 024689999995 9995 5578889999999999999999999854 5666766543 46888889
Q ss_pred CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 713 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 713 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
+|+++++++|.+++ +||+.+++|+++|++.+.++ ...++++++++.
T Consensus 373 ~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 373 EDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 99999999996655 89999999999999998655 356666666665
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.90 E-value=2.7e-22 Score=224.63 Aligned_cols=263 Identities=12% Similarity=0.044 Sum_probs=180.2
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.+||+||++++..++.....++..++|++++.++.... ..++.+.+|.++++|+..
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~------------------------~~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLH------------------------KIWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCC------------------------cccccCCCCEEEECCHHH
Confidence 47999999877665444444445678987655543110 013467899999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhc
Q 003655 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 563 (805)
Q Consensus 484 ~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG 563 (805)
.+.+. ..|++ ..|+.++++.++.. |.+..+. ...++++|
T Consensus 159 ~~~l~--------------------~~gi~--~~ki~v~G~p~~~~-f~~~~~~------------------~~~~~~~~ 197 (380)
T PRK13609 159 KKVLV--------------------DIGVP--PEQVVETGIPIRSS-FELKINP------------------DIIYNKYQ 197 (380)
T ss_pred HHHHH--------------------HcCCC--hhHEEEECcccChH-HcCcCCH------------------HHHHHHcC
Confidence 65321 12454 66888876655432 2221111 11235577
Q ss_pred cccCCCCcE-EEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 564 VLKDRNKPI-LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 564 ~l~~~~k~i-Il~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
+ ++++++ +++.|++...||+..+++++.+. ++++++++|++.. ...++++++++.++ ++|+|
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~---------~~~~~l~~~~~~~~--~~v~~ 260 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE---------ALKQSLEDLQETNP--DALKV 260 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH---------HHHHHHHHHHhcCC--CcEEE
Confidence 7 555554 55568888889999999987542 6789988875422 23456666766655 68999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccc----cccccCceEEEECCCCHHH
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPA----EIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~-~GG~~----EiI~dg~~G~l~~p~d~e~ 717 (805)
+|++ +++..+|+. +|++|. ++.|++++|||+||+|+|+++ .+|.. +.+.+ +|+.+.+.|+++
T Consensus 261 ~g~~------~~~~~l~~~-aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~~ 327 (380)
T PRK13609 261 FGYV------ENIDELFRV-TSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDEE 327 (380)
T ss_pred Eech------hhHHHHHHh-ccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHHH
Confidence 9943 247788884 999985 567999999999999999985 55531 23433 344445579999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
++++|.+++ +||+.+++|++++++.. ..++++.+++.+++++..
T Consensus 328 l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 328 VFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENHV 371 (380)
T ss_pred HHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhhh
Confidence 999996655 89999999999998765 678999999999987643
No 77
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=3.2e-23 Score=205.24 Aligned_cols=165 Identities=31% Similarity=0.503 Sum_probs=145.9
Q ss_pred hhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCC
Q 003655 560 EHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 638 (805)
Q Consensus 560 ~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~-~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~ 638 (805)
...+. +.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|++. ....+...++.+++..
T Consensus 7 ~~~~~--~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~ 73 (172)
T PF00534_consen 7 EKLKI--PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKE 73 (172)
T ss_dssp HHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGT
T ss_pred HHcCC--CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc-----------cccccccccccccccc
Confidence 33444 67889999999999999999999999999764 6899999999663 3467888999999999
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHH
Q 003655 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQA 718 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~l 718 (805)
+|.|+| .++.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|++++
T Consensus 74 ~i~~~~----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIFLG----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEEEE----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccccc----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 999999 6677899999996 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 003655 719 AEILVDFFEKCKADPSYWDKISLGGLKR 746 (805)
Q Consensus 719 A~aI~~~l~~l~~dp~~~~~ms~~ar~~ 746 (805)
+++|.+++ +|++.++.|+++|+++
T Consensus 149 ~~~i~~~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 149 ADAIEKLL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----CCHHHHHHHHHHhcCC
Confidence 99996666 8999999999999985
No 78
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=5.2e-21 Score=214.10 Aligned_cols=267 Identities=12% Similarity=0.062 Sum_probs=177.9
Q ss_pred cCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCH
Q 003655 402 LQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (805)
Q Consensus 402 l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 481 (805)
++.+.+|++++.+....+ ++...+.++|+.+++..... ...... ....+..+++.||.|+|+|.
T Consensus 99 ~~~~~~i~~~~~P~~~~~---~~~~~~~~~Vyd~~D~~~~~-~~~~~~------------~~~~e~~~~~~ad~vi~~S~ 162 (373)
T cd04950 99 LGFGRPILWYYTPYTLPV---AALLQASLVVYDCVDDLSAF-PGGPPE------------LLEAERRLLKRADLVFTTSP 162 (373)
T ss_pred cCCCCcEEEEeCccHHHH---HhhcCCCeEEEEcccchhcc-CCCCHH------------HHHHHHHHHHhCCEEEECCH
Confidence 355666777665544333 33356788888888743221 110000 01346778999999999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003655 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 482 ~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 561 (805)
...+..++. .+++.+||||+|.+.|.+........ +.
T Consensus 163 ~l~~~~~~~-------------------------~~~i~~i~ngvd~~~f~~~~~~~~~~-----------------~~- 199 (373)
T cd04950 163 SLYEAKRRL-------------------------NPNVVLVPNGVDYEHFAAARDPPPPP-----------------AD- 199 (373)
T ss_pred HHHHHHhhC-------------------------CCCEEEcccccCHHHhhcccccCCCh-----------------hH-
Confidence 876522111 35899999999999886643221000 00
Q ss_pred hccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003655 562 LCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFR 641 (805)
Q Consensus 562 lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~ 641 (805)
+ ...++++|+|+|++++.++++.+.+++. ..|+++|+++|++... ... .. ....++|+
T Consensus 200 ~---~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~-----------~~~---~~-~~~~~nV~ 257 (373)
T cd04950 200 L---AALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS-----------IDP---SA-LLRLPNVH 257 (373)
T ss_pred H---hcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc-----------cCh---hH-hccCCCEE
Confidence 0 1356789999999999888876655543 3478999999998321 000 11 11146899
Q ss_pred EecCCCCcCChHHHHHHHHccCcEEEeCCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003655 642 WISSQMNRVRNGELYRYICDTKGAFVQPALY-----EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 716 (805)
Q Consensus 642 flG~~~~~v~~~el~~~ia~aaDvfV~PS~~-----E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e 716 (805)
|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++.. ..+..+++ .++|++
T Consensus 258 ~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~---~~~~~~~~-~~~d~~ 328 (373)
T cd04950 258 YLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR---RYEDEVVL-IADDPE 328 (373)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH---hhcCcEEE-eCCCHH
Confidence 999 7888999999995 9999999863 46899999999999999999876544 34433444 456999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
+++++|.+++. .+.....+ .+.+ +.+.|||+..++++++..+
T Consensus 329 ~~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 329 EFVAAIEKALL---EDGPARER---RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 99999987652 23222211 2222 5588999999999996543
No 79
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.88 E-value=2.4e-21 Score=234.48 Aligned_cols=333 Identities=13% Similarity=0.114 Sum_probs=218.2
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchh
Q 003655 384 WPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQ 462 (805)
Q Consensus 384 ~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~ 462 (805)
|.......+.....+....+ .-|+|..|.....++...+.++ ..+++.+..|... |.+.++.. + + +
T Consensus 127 w~~Y~~vN~~FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPF----Ps~e~fr~-l-p------~ 193 (797)
T PLN03063 127 YDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPF----PSSEIYKT-L-P------S 193 (797)
T ss_pred HHHHHHHHHHHHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCC----CCHHHHhh-C-C------C
Confidence 43333333444445555544 4489999988887777777665 4678888889753 33332211 1 1 1
Q ss_pred hhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC--CCcEEEecCCccCCCCCCCcHHHHh
Q 003655 463 FTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEEKRR 540 (805)
Q Consensus 463 ~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~--~~ki~VIpnGVD~~~f~p~~~~~~r 540 (805)
...-+..|-.||.|-..|...+..+.+.....- + +-....++... ..++.++|||||.+.|.+.......
T Consensus 194 r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l-----~---~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~ 265 (797)
T PLN03063 194 RSELLRAVLTADLIGFHTYDFARHFLSACTRIL-----G---VEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEV 265 (797)
T ss_pred HHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHh-----C---ccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhH
Confidence 111234778999999999877654332211100 0 00000111111 2468899999999887653221100
Q ss_pred hhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCe----EEEEEeCCCCCCCc
Q 003655 541 LKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELV----NLVVVGGDRRKESK 616 (805)
Q Consensus 541 l~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v----~LvIVG~g~~~~~~ 616 (805)
.. ..+..... ..++++|+++||+++.||+..+++||.++.+.+|++ .|+.++.....
T Consensus 266 ~~--------------~~~~lr~~--~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~--- 326 (797)
T PLN03063 266 KQ--------------HMKELKRF--FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRN--- 326 (797)
T ss_pred HH--------------HHHHHHHh--cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCC---
Confidence 00 00000111 236789999999999999999999999998877875 35544432111
Q ss_pred cHHHHHHHHHHHHHHHhcC--CC---CcEEEecC--CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc-
Q 003655 617 DLEEQAEMKKMYSLIDQYK--LN---GQFRWISS--QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP- 688 (805)
Q Consensus 617 d~ee~~e~~~l~~li~~~~--L~---~~V~flG~--~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlP- 688 (805)
+. .+.+++++.++++. ++ +.+.|.+. ....++.+++..+|+ ++|+||+||..||||++++||||||+|
T Consensus 327 ~~---~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~ 402 (797)
T PLN03063 327 DV---PEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAK 402 (797)
T ss_pred ch---HHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCC
Confidence 11 12233444444432 21 22233321 112678899999999 599999999999999999999999999
Q ss_pred ---EEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 689 ---TFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 689 ---VVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
+|+|..+|.++.+ +.+|++++|.|++++|++|.++++ .+++.+++..+..++++ .++||..+++.+++-++
T Consensus 403 ~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 403 KGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELN 476 (797)
T ss_pred CCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHH
Confidence 9999999999976 557999999999999999987763 48888999999999998 89999999999988664
Q ss_pred H
Q 003655 766 V 766 (805)
Q Consensus 766 ~ 766 (805)
.
T Consensus 477 ~ 477 (797)
T PLN03063 477 D 477 (797)
T ss_pred H
Confidence 3
No 80
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.88 E-value=1.2e-20 Score=212.01 Aligned_cols=263 Identities=15% Similarity=0.132 Sum_probs=184.0
Q ss_pred CCceEEEEcCCCc-hHHHHHHHH-----HcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEE
Q 003655 404 GKPDLIIGNYSDG-NIVASLLAH-----KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFII 477 (805)
Q Consensus 404 ~kPDlIh~h~~~~-~lva~llar-----~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~II 477 (805)
.+||+||++++.. ...+..+++ ..++|++++++++.... ..+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEEE
Confidence 4899999976553 222233332 24789887776542100 012457999999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhh
Q 003655 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (805)
Q Consensus 478 t~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~ 557 (805)
++|+...+.+ ...|++ .+|+.++++++|.+.+.+.... ..
T Consensus 156 ~~s~~~~~~l--------------------~~~g~~--~~ki~v~g~~v~~~f~~~~~~~------------------~~ 195 (382)
T PLN02605 156 CPSEEVAKRA--------------------LKRGLE--PSQIRVYGLPIRPSFARAVRPK------------------DE 195 (382)
T ss_pred ECCHHHHHHH--------------------HHcCCC--HHHEEEECcccCHhhccCCCCH------------------HH
Confidence 9998776522 223555 6799999999987644332211 12
Q ss_pred hhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc----cCCCeE-EEEEeCCCCCCCccHHHHHHHHHHHHHHH
Q 003655 558 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK----LRELVN-LVVVGGDRRKESKDLEEQAEMKKMYSLID 632 (805)
Q Consensus 558 ~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~----~~~~v~-LvIVG~g~~~~~~d~ee~~e~~~l~~li~ 632 (805)
.++.+|+ ++++++|+++|+....|++..+++++..... ..++.+ ++++|++. ...+++.+.
T Consensus 196 ~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~----------~~~~~L~~~-- 261 (382)
T PLN02605 196 LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK----------KLQSKLESR-- 261 (382)
T ss_pred HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH----------HHHHHHHhh--
Confidence 3466888 7788999999999999999999999976531 135565 56666552 112333332
Q ss_pred hcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCce
Q 003655 633 QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK------GGPAEIIVNGKS 706 (805)
Q Consensus 633 ~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~------GG~~EiI~dg~~ 706 (805)
....+|+|+|++. ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+. +.+.++..
T Consensus 262 --~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~ 327 (382)
T PLN02605 262 --DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGF 327 (382)
T ss_pred --cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCc
Confidence 2245799999442 6888898 599999865 48999999999999999984 444 44445556
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 707 GYHIDPYHGEQAAEILVDFFEKCKAD-PSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 707 G~l~~p~d~e~lA~aI~~~l~~l~~d-p~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
|+.+ +|+++++++|.+++ .| ++.+++|++++++.. ...+++.+++.+.++.
T Consensus 328 g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 328 GAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELV 379 (382)
T ss_pred eeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHh
Confidence 7764 69999999997766 66 999999999999987 7788888888887764
No 81
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.86 E-value=1e-19 Score=213.32 Aligned_cols=345 Identities=13% Similarity=0.133 Sum_probs=237.9
Q ss_pred HHHHHcCCCceEEEEcCCCchHHHHHHHHH--------------cCCcEEEEecCCCcccC---CCChh-----------
Q 003655 397 EIAKELQGKPDLIIGNYSDGNIVASLLAHK--------------LGVTQCTIAHALEKTKY---PDSDI----------- 448 (805)
Q Consensus 397 ~i~~~l~~kPDlIh~h~~~~~lva~llar~--------------lgip~v~t~H~l~~~k~---~~s~~----------- 448 (805)
+.++.++.+||+||+|.+.++++...+.+. .+.+.++|.|++..... +....
T Consensus 153 ~~l~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~ 232 (601)
T TIGR02094 153 RALRALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANL 232 (601)
T ss_pred HHHHHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHh
Confidence 334455679999999999998777665332 13678999999765542 21111
Q ss_pred --hhhhcc---ccc-ccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEe
Q 003655 449 --YWKNLD---DKY-HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV 522 (805)
Q Consensus 449 --~~~~~~---~~y-~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VI 522 (805)
.+..+. ..+ ....++..-..++..||.|.+||+...+-.++..+.+ + .+.+....++.-|
T Consensus 233 gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~---~~~~~~~~~i~gI 298 (601)
T TIGR02094 233 GLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------Y---PGYEEEEVPIGYV 298 (601)
T ss_pred CCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------h---hhcccccCCccce
Confidence 110000 000 0012344556789999999999987765333222110 0 0111113358889
Q ss_pred cCCccCCCCCCCcHHHHhhhcCchh---------------------h-HHhhcchhhhhh--------------------
Q 003655 523 SPGADMSIYFPYTEEKRRLKSFHPE---------------------I-EELLYSDVENKE-------------------- 560 (805)
Q Consensus 523 pnGVD~~~f~p~~~~~~rl~~~~~~---------------------i-~~~l~~~~~~~~-------------------- 560 (805)
-||||...|.|.+...-........ + +...-++....+
T Consensus 299 tNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~ 378 (601)
T TIGR02094 299 TNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAIL 378 (601)
T ss_pred eCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhh
Confidence 9999999998765432111101101 1 111112222211
Q ss_pred -hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcC
Q 003655 561 -HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 561 -~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~----~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~ 635 (805)
.+|+..+++.+++++++|+...||++++++++.++.+.- .++++|+.|.+... |..-++.++.+.+++++..
T Consensus 379 ~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~---d~~gk~~i~~i~~la~~~~ 455 (601)
T TIGR02094 379 MATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPA---DGEGKEIIQRIVEFSKRPE 455 (601)
T ss_pred hhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcc---cchHHHHHHHHHHHHhccc
Confidence 355556789999999999999999999999988886421 35999999999652 4445567888888888766
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEe-CCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC-
Q 003655 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ-PAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP- 712 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~-PS~-~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p- 712 (805)
.+++|.|+- .. +..+.+.|-.++|++++ ||. +|++|++-+=||..|.+.+++..|...|.. ++.|||.|.+
T Consensus 456 ~~~kv~f~~----~Y-d~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~ 529 (601)
T TIGR02094 456 FRGRIVFLE----NY-DINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDG 529 (601)
T ss_pred CCCCEEEEc----CC-CHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCC
Confidence 678999985 23 34566655557999999 999 999999999999999999999999998887 6789999984
Q ss_pred -----------CCHHHHHHHHHHHHHHhh-CC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 713 -----------YHGEQAAEILVDFFEKCK-AD-----PSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 713 -----------~d~e~lA~aI~~~l~~l~-~d-----p~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
.|++++-++|.+.+..+. ++ |..|.+|.++|.+.....|||++++++|.++|
T Consensus 530 ~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 530 EEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 789999999977663333 43 67799999999998777899999999999986
No 82
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.86 E-value=7e-20 Score=186.06 Aligned_cols=121 Identities=31% Similarity=0.519 Sum_probs=103.4
Q ss_pred EEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHH
Q 003655 575 TMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE 654 (805)
Q Consensus 575 ~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~e 654 (805)
++|++.+.||++.+++++..+.+..++++++++|++.+. ......+..++..++|.++| .++..+
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~----~~~~~~ 173 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLG----GLDPEE 173 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeC----CCCcHH
Confidence 899999999999999999999888889999999998752 23333366778888999999 554445
Q ss_pred HHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003655 655 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI 710 (805)
Q Consensus 655 l~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~ 710 (805)
....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 174 ~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 174 LLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 55555545999999999999999999999999999999999999999999999874
No 83
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.86 E-value=1.9e-20 Score=226.45 Aligned_cols=326 Identities=15% Similarity=0.124 Sum_probs=213.2
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHh
Q 003655 392 EDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (805)
Q Consensus 392 ~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~ 470 (805)
+.....+....+ .-|+|..|.....+++..+.++ ...++.+..|... |.+.+... + + +...-...|
T Consensus 121 ~~fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pf----P~~~~f~~-l-p------~~~~ll~~l 187 (726)
T PRK14501 121 QRFAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPF----PSFEVFRL-L-P------WREEILEGL 187 (726)
T ss_pred HHHHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCC----CChHHHhh-C-C------ChHHHHHHH
Confidence 344445555444 4589999998887888877665 3567888888753 33333221 1 1 111123477
Q ss_pred hcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHH
Q 003655 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEE 550 (805)
Q Consensus 471 ~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~ 550 (805)
-.+|.|-..+......+.+.....-.. ... .+ .....|- ..++.++|||||++.|.+......... ...
T Consensus 188 l~~Dligf~t~~~~r~Fl~~~~~~l~~-~~~-~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~----~~~- 256 (726)
T PRK14501 188 LGADLIGFHTYDYVRHFLSSVLRVLGY-ETE-LG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQE----EIR- 256 (726)
T ss_pred hcCCeEEeCCHHHHHHHHHHHHHHcCC-ccC-CC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHH----HHH-
Confidence 899999888877655433221110000 000 00 1111111 226889999999998866432111000 000
Q ss_pred hhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHH
Q 003655 551 LLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKK 626 (805)
Q Consensus 551 ~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~~e~~~ 626 (805)
..++. ..++++|+++||+++.||+..+++|+.++.+.+|+ ++|+++|.+.... -.+.....++
T Consensus 257 ------~lr~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~--~~~~~~l~~~ 323 (726)
T PRK14501 257 ------RLRQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTG--VPQYQEMKRE 323 (726)
T ss_pred ------HHHHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcc--hHHHHHHHHH
Confidence 00111 24678999999999999999999999998877775 7899998542210 0222234445
Q ss_pred HHHHHHhcCC-------CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHc-----CCcEEEcCc
Q 003655 627 MYSLIDQYKL-------NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-----GLPTFATCK 694 (805)
Q Consensus 627 l~~li~~~~L-------~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~-----GlPVVaT~~ 694 (805)
+.+++.+.+. .+-+.+.| .++.+++..+|+. +|+||+||..||||++++||||| |.||++...
T Consensus 324 ~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~~-aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~ 398 (726)
T PRK14501 324 IDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYRA-ADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMA 398 (726)
T ss_pred HHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHHh-ccEEEecccccccCcccceEEEEcCCCCceEEEeccc
Confidence 5555544331 12244556 7788999999995 99999999999999999999999 557777778
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 695 GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 695 GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||..+++++++.++..
T Consensus 399 G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 399 GAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELREA 463 (726)
T ss_pred chhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHH
Confidence 8888876 3899999999999999987762 23445555567788887 7999999999999987643
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=4.7e-19 Score=187.74 Aligned_cols=291 Identities=23% Similarity=0.322 Sum_probs=209.2
Q ss_pred ceEEEEcCCCchH---HHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 406 PDLIIGNYSDGNI---VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 406 PDlIh~h~~~~~l---va~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
+|++|.+...... .........+.+.+...|....................+.+ ...........+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLL---KRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHH---HHHHHhccccccEEEECCHH
Confidence 5999977665432 34555556778888888876442221111110000000000 00011112247778888765
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 562 (805)
.....+.. .. ..++.++||+++...+.+.. .
T Consensus 161 ~~~~~~~~--------------------~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEAL--------------------GV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHHh--------------------CC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 42211110 01 23688999999998776540 1
Q ss_pred ccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 563 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 563 G~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
++..+.....++++||+.+.||++.+++++..+.+..+++.++++|.+... .+.+..++.+++..++|.|
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~v~~ 261 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER----------REELEKLAKKLGLEDNVKF 261 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc----------HHHHHHHHHHhCCCCcEEE
Confidence 111111247999999999999999999999999887667999999999651 2455668888888889999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 722 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI 722 (805)
+| .++..++..+++. +|++++||.+|+||++++|||+||+|||+++.+|..+++.++.+|+++++.+.+++++++
T Consensus 262 ~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i 336 (381)
T COG0438 262 LG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336 (381)
T ss_pred ec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHH
Confidence 99 6666788888885 899999999999999999999999999999999999999988789977777899999999
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 723 VDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 723 ~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
..++ ++++.++.++..+++.+.+.|+|+..++++.+++...
T Consensus 337 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 337 EQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEEL 377 (381)
T ss_pred HHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 7766 7778899999877777778999999999999887643
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.84 E-value=2.8e-19 Score=201.51 Aligned_cols=262 Identities=15% Similarity=0.142 Sum_probs=177.8
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.+||+||++++.+++.....++..++|+++..++.... ..+..+.+|.+++.|+..
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~------------------------~~w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH------------------------KNWITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc------------------------cccccCCCCEEEECCHHH
Confidence 48999999866554332222345689976544432100 012356899999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhc
Q 003655 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 563 (805)
Q Consensus 484 ~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG 563 (805)
.+.+ ...|++ ..|+.+++++++.....+.... ..+.++|
T Consensus 159 ~~~l--------------------~~~gi~--~~ki~v~GiPv~~~f~~~~~~~-------------------~~~~~~~ 197 (391)
T PRK13608 159 KQDF--------------------IDVGID--PSTVKVTGIPIDNKFETPIDQK-------------------QWLIDNN 197 (391)
T ss_pred HHHH--------------------HHcCCC--HHHEEEECeecChHhcccccHH-------------------HHHHHcC
Confidence 6632 123555 6788888887764432221111 1234567
Q ss_pred cccCCCCcE-EEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 564 VLKDRNKPI-LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 564 ~l~~~~k~i-Il~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
+ ++++++ +++.|+++..||++.+++++.+ ..+++++++++++.. ... .++.+.++..++|.+
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~---------~l~---~~l~~~~~~~~~v~~ 260 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK---------ELK---RSLTAKFKSNENVLI 260 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH---------HHH---HHHHHHhccCCCeEE
Confidence 7 555555 5678899988999999998632 236788877765421 111 233334445568999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccc----cccccccCceEEEECCCCHHH
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGG----PAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~-~GG----~~EiI~dg~~G~l~~p~d~e~ 717 (805)
+|++ +++..+|+. +|++|. ++.|+|+.|||+||+|+|+++ .+| ...++.+.+.|+.. .|+++
T Consensus 261 ~G~~------~~~~~~~~~-aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~~ 327 (391)
T PRK13608 261 LGYT------KHMNEWMAS-SQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPEE 327 (391)
T ss_pred Eecc------chHHHHHHh-hhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHHH
Confidence 9943 368888885 999997 457999999999999999985 333 12233455566654 48999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
++++|.+++ +|++.+++|++++++.. ..|+++.+++++++++.
T Consensus 328 l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 328 AIKIVASLT----NGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 999996655 89999999999999986 67999999999998764
No 86
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.79 E-value=4.8e-18 Score=189.39 Aligned_cols=273 Identities=12% Similarity=0.071 Sum_probs=178.6
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHH-hhcCCEEEecCH
Q 003655 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA-MNHTDFIITSTF 481 (805)
Q Consensus 404 ~kPDlIh~h~~~-~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~ 481 (805)
.+||+||+|... ..+.++++++.+|+|++++-+++.... ... .|.. . ..+.+ -+.+|.++++|.
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~-~~~--~~~~--~---------~~r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGD-RYS--PMPE--E---------INRQLTGHIADLHFAPTE 150 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCC-CCC--CCcc--H---------HHHHHHHHHHHhccCCCH
Confidence 479999999743 467788999999999876655441100 000 0100 0 01122 235899999998
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCc-cCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003655 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 482 ~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGV-D~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~ 560 (805)
...+.+. ..|++ +.++.+++||+ |...+.+..... ...++
T Consensus 151 ~~~~~l~--------------------~~G~~--~~~I~vign~~~d~~~~~~~~~~~-----------------~~~~~ 191 (365)
T TIGR00236 151 QAKDNLL--------------------RENVK--ADSIFVTGNTVIDALLTNVEIAYS-----------------SPVLS 191 (365)
T ss_pred HHHHHHH--------------------HcCCC--cccEEEeCChHHHHHHHHHhhccc-----------------hhHHH
Confidence 8776322 12555 67999999996 432111100000 01122
Q ss_pred hhccccCCCCcEEEEEe-ec-cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCC
Q 003655 561 HLCVLKDRNKPILFTMA-RL-DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 638 (805)
Q Consensus 561 ~lG~l~~~~k~iIl~vG-RL-~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~ 638 (805)
.+|. +++++++++ |. ...||+..+++|+.++.+..++++++++|++.. ...+ .+.+.++..+
T Consensus 192 ~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~---------~~~~---~~~~~~~~~~ 255 (365)
T TIGR00236 192 EFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP---------VVRE---PLHKHLGDSK 255 (365)
T ss_pred hcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh---------HHHH---HHHHHhCCCC
Confidence 3332 234555555 54 245899999999999877778899999875422 1111 1334445667
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHH
Q 003655 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT-~~GG~~EiI~dg~~G~l~~p~d~e~ 717 (805)
+|+|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.+| +|+++ +.|+++
T Consensus 256 ~v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~ 323 (365)
T TIGR00236 256 RVHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKEN 323 (365)
T ss_pred CEEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHH
Confidence 899999 6677889999996 99999887 66789999999999996 778888988766 56666 479999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003655 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~ 762 (805)
++++|.+++ +||+.+++|+.++..+ ....+++++++.+.+
T Consensus 324 i~~ai~~ll----~~~~~~~~~~~~~~~~-g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 324 ITKAAKRLL----TDPDEYKKMSNASNPY-GDGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHHH----hChHHHHHhhhcCCCC-cCchHHHHHHHHHHh
Confidence 999996655 8999999888765322 123455555554443
No 87
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.79 E-value=3.4e-17 Score=187.22 Aligned_cols=323 Identities=12% Similarity=0.079 Sum_probs=217.4
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhc
Q 003655 394 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (805)
Q Consensus 394 ~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 472 (805)
....+....+ .-|+|-.|.....+++..+.++ ...++-+-.|.. +|.+++... + + +...-+..|-.
T Consensus 122 FA~~i~~~~~-~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiP----FPs~eifr~-L-P------~r~~ll~glL~ 188 (487)
T TIGR02398 122 FAEAACLEAA-EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTP----FPSADVFNI-L-P------WREQIIGSLLC 188 (487)
T ss_pred HHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCC----CCChHHHhh-C-C------chHHHHHHHhc
Confidence 3334444433 4589999988887788777665 345677777864 333332211 1 1 11122346779
Q ss_pred CCEEEecCHHHHhhcccccccccc---cc------cccccc----ceeeeccCCCCCC--cEEEecCCccCCCCCCCcHH
Q 003655 473 TDFIITSTFQEIAGSKDTVGQYES---HT------AFTLPG----LYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEE 537 (805)
Q Consensus 473 AD~IIt~S~~~~~~~~~~vgqY~~---~~------~f~~p~----l~~~~~gI~~~~~--ki~VIpnGVD~~~f~p~~~~ 537 (805)
||.|-.-|...+..+.+....... .. .++.-| .-....++.+... ++.++|.|||.+.|.+....
T Consensus 189 aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~ 268 (487)
T TIGR02398 189 CDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAA 268 (487)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcC
Confidence 999988888776644433221100 00 000000 0000001222122 47889999999988543211
Q ss_pred H---HhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCC
Q 003655 538 K---RRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGD 610 (805)
Q Consensus 538 ~---~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LvIVG~g 610 (805)
. ++. ...++.+| ++++|++++|++..||+...++||.++.+.+|+ +.|++||..
T Consensus 269 ~~~~~~~--------------~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~p 329 (487)
T TIGR02398 269 ASIREMM--------------ERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVP 329 (487)
T ss_pred chHHHHH--------------HHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCC
Confidence 1 111 11233333 678999999999999999999999999888885 799999987
Q ss_pred CCCCCccHHHHHHHHHHHHHHHhc-------CCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHH
Q 003655 611 RRKESKDLEEQAEMKKMYSLIDQY-------KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAM 683 (805)
Q Consensus 611 ~~~~~~d~ee~~e~~~l~~li~~~-------~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAM 683 (805)
... ...+.....+++.+++.+. +..+-+.+.+ .++.+++..+|+ .||+++.||..||++++..|+|
T Consensus 330 sr~--~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyv 402 (487)
T TIGR02398 330 AAS--GMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYV 402 (487)
T ss_pred Ccc--cchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHH
Confidence 532 2234445566777777765 3344466666 788999999999 5999999999999999999999
Q ss_pred HcCC----cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003655 684 TCGL----PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQR 759 (805)
Q Consensus 684 A~Gl----PVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~r 759 (805)
||+. |+|.|.++|.++.. ..+++++|.|++++|++|.++++ ..++.+++--+..++++ .++|....++.
T Consensus 403 a~~~~~~GvLILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~~ 475 (487)
T TIGR02398 403 AAQGLLDGVLVLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWADE 475 (487)
T ss_pred hhhcCCCCCEEEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHH
Confidence 9998 99999999998766 35899999999999999988774 45556666666667776 78898888888
Q ss_pred HHH
Q 003655 760 LLT 762 (805)
Q Consensus 760 ll~ 762 (805)
++.
T Consensus 476 fl~ 478 (487)
T TIGR02398 476 FLA 478 (487)
T ss_pred HHH
Confidence 775
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.78 E-value=2.5e-17 Score=181.78 Aligned_cols=245 Identities=15% Similarity=0.158 Sum_probs=166.9
Q ss_pred Cc-eEEEEcCCCch---HHHHHH--HHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEe
Q 003655 405 KP-DLIIGNYSDGN---IVASLL--AHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (805)
Q Consensus 405 kP-DlIh~h~~~~~---lva~ll--ar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 478 (805)
+| |+||.+++... +...++ .++.|+|+++++|+++........ + + ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~---------~-~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNY---------Y-L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccc---------h-h---hHHHHHHHHhCCEEEE
Confidence 46 99999887642 123222 234589999999997543211000 0 0 1235678999999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhh
Q 003655 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 479 ~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 558 (805)
.|..+.+.+++ .|+. ..++.++++..+.....+. .
T Consensus 130 ~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~----~------------------- 164 (333)
T PRK09814 130 HSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV----K------------------- 164 (333)
T ss_pred CCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc----c-------------------
Confidence 99988774322 2443 4567777665543211000 0
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCC
Q 003655 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 638 (805)
Q Consensus 559 ~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~ 638 (805)
....++.|+|+|++.+.+++ ....++++|+|+|+|+.. + ...+
T Consensus 165 -------~~~~~~~i~yaG~l~k~~~l----------~~~~~~~~l~i~G~g~~~-----------~---------~~~~ 207 (333)
T PRK09814 165 -------TPSFQKKINFAGNLEKSPFL----------KNWSQGIKLTVFGPNPED-----------L---------ENSA 207 (333)
T ss_pred -------cccCCceEEEecChhhchHH----------HhcCCCCeEEEECCCccc-----------c---------ccCC
Confidence 02345689999999954321 112367999999999752 1 2457
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCC-C----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceE
Q 003655 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPA-L----------YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSG 707 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS-~----------~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G 707 (805)
+|.|+| +++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.|+..|+|+++.+|
T Consensus 208 ~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G 281 (333)
T PRK09814 208 NISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLG 281 (333)
T ss_pred CeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCce
Confidence 899999 8888999999985 4433322 1 135789999999999999999999999999999999
Q ss_pred EEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003655 708 YHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQR 759 (805)
Q Consensus 708 ~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~r 759 (805)
++++ +.++++++|.. .+++.+++|++++++.. +++.-..++++
T Consensus 282 ~~v~--~~~el~~~l~~------~~~~~~~~m~~n~~~~~-~~~~~g~~~~~ 324 (333)
T PRK09814 282 FVVD--SLEELPEIIDN------ITEEEYQEMVENVKKIS-KLLRNGYFTKK 324 (333)
T ss_pred EEeC--CHHHHHHHHHh------cCHHHHHHHHHHHHHHH-HHHhcchhHHH
Confidence 9997 67888888854 24677899999999876 55544444433
No 89
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.76 E-value=1.1e-16 Score=178.85 Aligned_cols=249 Identities=14% Similarity=0.124 Sum_probs=161.3
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+||++.+.+ .......+++.|+|+++..|.. .|..... .. ....+.+|.|+++|+.
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~------~~---~~~~~~~d~i~~~~~~ 144 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQG------RA---FKIAKATDHVLALFPF 144 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCch------HH---HHHHHHHhhheeCCcc
Confidence 4799999876532 3323344666799988765431 1111000 00 1235688999999876
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 562 (805)
..+...+ .|+ ++.++.|.+......+... ...++.+
T Consensus 145 ~~~~~~~--------------------~g~-----~~~~~G~p~~~~~~~~~~~-------------------~~~~~~l 180 (380)
T PRK00025 145 EAAFYDK--------------------LGV-----PVTFVGHPLADAIPLLPDR-------------------AAARARL 180 (380)
T ss_pred CHHHHHh--------------------cCC-----CeEEECcCHHHhcccccCh-------------------HHHHHHc
Confidence 5442110 122 2455555543321111111 1223457
Q ss_pred ccccCCCCcEEEE-Ee-eccCC-CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhc-CCCC
Q 003655 563 CVLKDRNKPILFT-MA-RLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY-KLNG 638 (805)
Q Consensus 563 G~l~~~~k~iIl~-vG-RL~~~-Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~-~L~~ 638 (805)
|+ ++++++|+. .| |.... ++++.+++++..+.+.+++++++++|+++. ..+++++.++++ ++.
T Consensus 181 ~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~~- 247 (380)
T PRK00025 181 GL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK----------RREQIEEALAEYAGLE- 247 (380)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh----------hHHHHHHHHhhcCCCC-
Confidence 76 556676544 44 44443 457899999999887778899999987432 234566666666 553
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-----------------Ccccccccc
Q 003655 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-----------------CKGGPAEII 701 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT-----------------~~GG~~EiI 701 (805)
+.+.. +++..+|+. +|++|.+| |.+.+|||+||+|+|++ +.++.++++
T Consensus 248 -v~~~~--------~~~~~~~~~-aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (380)
T PRK00025 248 -VTLLD--------GQKREAMAA-ADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL 312 (380)
T ss_pred -eEEEc--------ccHHHHHHh-CCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh
Confidence 55543 368888885 99999987 88889999999999987 566777888
Q ss_pred ccCc--eEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003655 702 VNGK--SGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 702 ~dg~--~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v 747 (805)
.++. .+++.+..|++++++++.+++ +|++.+++|++++.+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 313 AGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred cCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 7654 557777789999999996665 89999999999975544
No 90
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.76 E-value=7.8e-16 Score=162.45 Aligned_cols=295 Identities=17% Similarity=0.232 Sum_probs=206.2
Q ss_pred HHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCccc-C-------CCC-hhhhhhcccccccchhhhHhHH
Q 003655 398 IAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTK-Y-------PDS-DIYWKNLDDKYHFSCQFTADLI 468 (805)
Q Consensus 398 i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k-~-------~~s-~~~~~~~~~~y~f~~~~~~e~~ 468 (805)
+-+..+-.|||.+-...-+ +.-...++..++|++.-+|-.--++ . +.+ -+.|.++.-.-.|++. -..
T Consensus 143 ~Eai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~l---Y~~ 218 (465)
T KOG1387|consen 143 FEAIIRFPPDIFIDTMGYP-FSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALL---YQS 218 (465)
T ss_pred HHHHHhCCchheEecCCCc-chhHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHH---HHh
Confidence 3344456899988443222 2223345567899999888421110 0 001 1122221110011111 123
Q ss_pred HhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhh
Q 003655 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEI 548 (805)
Q Consensus 469 a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i 548 (805)
+=..||.+++.|......++..++ ..+..+|+|..+++....
T Consensus 219 ~G~~ad~vm~NssWT~nHI~qiW~-----------------------~~~~~iVyPPC~~e~lks--------------- 260 (465)
T KOG1387|consen 219 AGSKADIVMTNSSWTNNHIKQIWQ-----------------------SNTCSIVYPPCSTEDLKS--------------- 260 (465)
T ss_pred ccccceEEEecchhhHHHHHHHhh-----------------------ccceeEEcCCCCHHHHHH---------------
Confidence 456899999999776554444432 235678888666542111
Q ss_pred HHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHcc------CCCeEEEEEeCCCCCCCccHHHHH
Q 003655 549 EELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKL------RELVNLVVVGGDRRKESKDLEEQA 622 (805)
Q Consensus 549 ~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~------~~~v~LvIVG~g~~~~~~d~ee~~ 622 (805)
..+- ...+.+.++++|.+.|.||.. +++.++..... .+.++|++||+-..+ ++.+
T Consensus 261 ------------~~~t-e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRne-----eD~e 321 (465)
T KOG1387|consen 261 ------------KFGT-EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNE-----EDEE 321 (465)
T ss_pred ------------Hhcc-cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCCh-----hhHH
Confidence 1111 145678999999999999998 66655543332 255899999998652 3445
Q ss_pred HHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-cccc
Q 003655 623 EMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEII 701 (805)
Q Consensus 623 e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~-~EiI 701 (805)
..+.|+.++++++++++|.|-- .++.+++..++.. |.+.|+.-..|-||+.++|+||+|+-.|+.+.||+ -|||
T Consensus 322 rvk~Lkd~a~~L~i~~~v~F~~----N~Py~~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV 396 (465)
T KOG1387|consen 322 RVKSLKDLAEELKIPKHVQFEK----NVPYEKLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIV 396 (465)
T ss_pred HHHHHHHHHHhcCCccceEEEe----cCCHHHHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeee
Confidence 6788999999999999999998 8999999999996 99999999999999999999999999999999998 5666
Q ss_pred cc---CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 702 VN---GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 702 ~d---g~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
.+ ..+||+.. +.++.|+++.+.+. .|++.+..|..+||..+ .+|+=....+.+.+.+
T Consensus 397 ~~~~G~~tGFla~--t~~EYaE~iLkIv~---~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 397 TPWDGETTGFLAP--TDEEYAEAILKIVK---LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred eccCCccceeecC--ChHHHHHHHHHHHH---cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 53 34799884 67899999988875 78888999999999987 7898877777776554
No 91
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.75 E-value=7.3e-17 Score=178.86 Aligned_cols=252 Identities=17% Similarity=0.135 Sum_probs=168.0
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+||+|.... .+.+.++++..|+|++++.|+... +.... .|.. . .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~----~--------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEE----N--------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchH----H--------HHHHHHHhhhccCCCHH
Confidence 4799999996543 567788888999998877665422 10000 0100 0 11245678999999988
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCc-cCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGV-D~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 561 (805)
..+.+ ...|++ ..|+.+++|++ |...+.+..... ...++.
T Consensus 152 ~~~~l--------------------~~~G~~--~~kI~vign~v~d~~~~~~~~~~~-----------------~~~~~~ 192 (363)
T cd03786 152 ARRNL--------------------LQEGEP--PERIFVVGNTMIDALLRLLELAKK-----------------ELILEL 192 (363)
T ss_pred HHHHH--------------------HHcCCC--cccEEEECchHHHHHHHHHHhhcc-----------------chhhhh
Confidence 76622 223555 77899999985 432221111000 001234
Q ss_pred hccccCCCCcEEEEEeeccC---CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCC-C
Q 003655 562 LCVLKDRNKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL-N 637 (805)
Q Consensus 562 lG~l~~~~k~iIl~vGRL~~---~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L-~ 637 (805)
+|+ ++++.++++.||... .||++.+++++..+.+. ++.+++.|+++. .+++++.+.++++ .
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~-----------~~~l~~~~~~~~~~~ 257 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT-----------RPRIREAGLEFLGHH 257 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh-----------HHHHHHHHHhhccCC
Confidence 555 445567778999875 79999999999988653 466666665532 3567777777776 6
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHH
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGE 716 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~-GG~~EiI~dg~~G~l~~p~d~e 716 (805)
++|+|+| .....++..+++. +|++|.||- | ++.|||+||+|||+++. +...+.+++| .++.+. .|++
T Consensus 258 ~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~~~-~~~~ 325 (363)
T cd03786 258 PNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVLVG-TDPE 325 (363)
T ss_pred CCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEecC-CCHH
Confidence 7899998 5566789999985 999999984 4 47899999999999964 4456666544 233332 3689
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHH
Q 003655 717 QAAEILVDFFEKCKADPSYWDKIS 740 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms 740 (805)
+++++|.+++ +|+..+.+|.
T Consensus 326 ~i~~~i~~ll----~~~~~~~~~~ 345 (363)
T cd03786 326 AILAAIEKLL----SDEFAYSLMS 345 (363)
T ss_pred HHHHHHHHHh----cCchhhhcCC
Confidence 9999996655 7887776663
No 92
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.75 E-value=3.5e-16 Score=186.79 Aligned_cols=344 Identities=14% Similarity=0.136 Sum_probs=232.2
Q ss_pred HHHHcCCCceEEEEcCCCchHHHH-----HHHHH----------cCCcEEEEecCCCccc---CCCChh-----------
Q 003655 398 IAKELQGKPDLIIGNYSDGNIVAS-----LLAHK----------LGVTQCTIAHALEKTK---YPDSDI----------- 448 (805)
Q Consensus 398 i~~~l~~kPDlIh~h~~~~~lva~-----llar~----------lgip~v~t~H~l~~~k---~~~s~~----------- 448 (805)
+++.++.+||+||+|.+.++++.. ++... .+.+.|+|.|++.+.. ++...+
T Consensus 241 ~Lr~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~l 320 (778)
T cd04299 241 ALRALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYAREL 320 (778)
T ss_pred HHHHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHc
Confidence 345556689999999999988776 44321 1467899999975543 221111
Q ss_pred --hhhhccccc-cc----chhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEE
Q 003655 449 --YWKNLDDKY-HF----SCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI 521 (805)
Q Consensus 449 --~~~~~~~~y-~f----~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~V 521 (805)
.+..+...- .+ ..++..-..++..|+.|.++|+-.-+-.++.+.. ...|.+....++.-
T Consensus 321 gl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~~ 386 (778)
T cd04299 321 GLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIGH 386 (778)
T ss_pred CCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCceec
Confidence 111110000 00 1234556678999999999998764333333221 11233322446888
Q ss_pred ecCCccCCCCC-CCcHHHH-h--------------------------hhcCchhhHHhhcchhhhh--------------
Q 003655 522 VSPGADMSIYF-PYTEEKR-R--------------------------LKSFHPEIEELLYSDVENK-------------- 559 (805)
Q Consensus 522 IpnGVD~~~f~-p~~~~~~-r--------------------------l~~~~~~i~~~l~~~~~~~-------------- 559 (805)
|.||||...|. |..+.-- + +.+.+.....-|......+
T Consensus 387 ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~ 466 (778)
T cd04299 387 VTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEE 466 (778)
T ss_pred eeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhh
Confidence 99999999887 4322210 0 0000001111111110000
Q ss_pred -hhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHcc----CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhc
Q 003655 560 -EHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY 634 (805)
Q Consensus 560 -~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~----~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~ 634 (805)
...|...+++.++|+++.|+...|+.+++++.+.++.+. ...+++|+.|.+.+. |..-+..++.+.+++++.
T Consensus 467 ~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~---d~~gK~iIk~i~~~a~~p 543 (778)
T cd04299 467 IGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPA---DEPGKELIQEIVEFSRRP 543 (778)
T ss_pred hhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcc---chHHHHHHHHHHHHHhCc
Confidence 012433477888999999999999999999988877542 135999999998763 445567788888888877
Q ss_pred CCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC
Q 003655 635 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP 712 (805)
Q Consensus 635 ~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p 712 (805)
...++|.|+- .. +..+.+.|-..+|++++||+ +|++|++-+=||..|.+.+++-.|...|.. +|.|||.|.+
T Consensus 544 ~~~~kVvfle----~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~ 617 (778)
T cd04299 544 EFRGRIVFLE----DY-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGD 617 (778)
T ss_pred CCCCcEEEEc----CC-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCC
Confidence 7788999985 33 34566665557999999999 999999999999999999999999999988 8899999987
Q ss_pred ------------CCHHHHHHHHHHHHH-HhhC-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 713 ------------YHGEQAAEILVDFFE-KCKA-----DPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 713 ------------~d~e~lA~aI~~~l~-~l~~-----dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
.|++++-+.|.+.+. ...+ .|..|.+|.+++.+.+...|||++++++|.+-+
T Consensus 618 ~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 618 GDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred CccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 455666666654443 2223 288899999999999888999999999999854
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.69 E-value=4.4e-15 Score=179.81 Aligned_cols=321 Identities=13% Similarity=0.149 Sum_probs=212.2
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHh
Q 003655 392 EDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (805)
Q Consensus 392 ~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~ 470 (805)
......+....+ .-|+|..|.....++..++.++ ...++.+..|.. +|.+.++. .+ -+...-+..|
T Consensus 219 ~~FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiP----FPs~Eifr-~L-------P~r~elL~gl 285 (934)
T PLN03064 219 QMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTP----FPSSEIHR-TL-------PSRSELLRSV 285 (934)
T ss_pred HHHHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCC----CCChHHHh-hC-------CcHHHHHHHH
Confidence 334445555543 4489999998887888877775 457888888875 33333221 11 1111223477
Q ss_pred hcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC--cEEEecCCccCCCCCCCcHH---HHhhhcCc
Q 003655 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEE---KRRLKSFH 545 (805)
Q Consensus 471 ~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~--ki~VIpnGVD~~~f~p~~~~---~~rl~~~~ 545 (805)
-.||.|-.-|+..+..+....... -++-....++..... ++.+.|-|||.+.|...... ..+..
T Consensus 286 L~aDlIGFqT~~y~rhFl~~c~rl--------Lg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~--- 354 (934)
T PLN03064 286 LAADLVGFHTYDYARHFVSACTRI--------LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIK--- 354 (934)
T ss_pred hcCCeEEeCCHHHHHHHHHHHHHH--------hCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHH---
Confidence 799999998887765433221110 001111122322222 46678999999887543211 11111
Q ss_pred hhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeE--EEEE--eCCCCCCCccHHHH
Q 003655 546 PEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVN--LVVV--GGDRRKESKDLEEQ 621 (805)
Q Consensus 546 ~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~--LvIV--G~g~~~~~~d~ee~ 621 (805)
..++.+ .++.+|++++|++..||+...++||.++.+.+|+++ ++++ .-... +...+..
T Consensus 355 -----------~lr~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr--~~v~eY~ 416 (934)
T PLN03064 355 -----------ELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTR--TDVPEYQ 416 (934)
T ss_pred -----------HHHHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCC--CCcHHHH
Confidence 112222 357799999999999999999999999888777753 4444 32211 1112233
Q ss_pred HHHHHHHHHHHhcC----CCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC----cEEE
Q 003655 622 AEMKKMYSLIDQYK----LNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFA 691 (805)
Q Consensus 622 ~e~~~l~~li~~~~----L~~--~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~Gl----PVVa 691 (805)
....++.+++.+.+ -.+ -|+++. ..++.+++..+|+ .+|+++.||..|||+++..|||+|+. +.|.
T Consensus 417 ~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLIL 492 (934)
T PLN03064 417 KLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLIL 492 (934)
T ss_pred HHHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEE
Confidence 33444555555433 211 145443 2478999999999 49999999999999999999999954 4445
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 692 TCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 692 T~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
|.++|.++.+ +..+++++|.|.+++|++|.++++ .+++.++++.+++++++ ..+||..+++.+++-.
T Consensus 493 SEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~L 559 (934)
T PLN03064 493 SEFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSEL 559 (934)
T ss_pred eCCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHHH
Confidence 9999998888 446999999999999999988773 48999999999999998 7899999999977633
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.68 E-value=5.7e-15 Score=171.38 Aligned_cols=169 Identities=12% Similarity=0.145 Sum_probs=146.9
Q ss_pred CcEEEEEe--eccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCC----------
Q 003655 570 KPILFTMA--RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN---------- 637 (805)
Q Consensus 570 k~iIl~vG--RL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~---------- 637 (805)
+..+++++ || +.|.++.+++++.+.....|++.|.+.|.+.+. .....++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~--------~~~~~l~~~i~~~~~~~~~~~~~~~~ 389 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDN--------DITQLLEDILEQINEEYNQDKNFFSL 389 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCch--------hHHHHHHHHHHHHHhhhchhhhcccc
Confidence 44678888 99 999999999999999999999999999988531 1245666777777666
Q ss_pred -------------------CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc
Q 003655 638 -------------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 698 (805)
Q Consensus 638 -------------------~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~ 698 (805)
++|.|.| ..+..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~v~f~g----y~~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 390 SEQDENQPILQTDEEQKEKERIAFTT----LTNEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred chhhhhhhcccchhhcccccEEEEEe----cCCHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCCc
Confidence 7899999 4444688999996 89999999999999 9999999999999 55689
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003655 699 EIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 699 EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~L 763 (805)
++|+||+||+++ +|.++++++|..++ .+++.|++++..+.+.+ ++||-+.+.++|.++
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 999999999999 59999999997766 89999999999999998 899999999888764
No 95
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.58 E-value=5.8e-15 Score=140.30 Aligned_cols=130 Identities=21% Similarity=0.282 Sum_probs=96.5
Q ss_pred CcEEEEEeeccCCCCHHHHHH-HHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCC
Q 003655 570 KPILFTMARLDRVKNLTGLVE-WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 570 k~iIl~vGRL~~~Kgi~~Lle-A~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~ 648 (805)
.++|+++|++.+.|+++.+++ ++.++.+..|++.|+|+|++++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~-------------~l~~~-----~~~~v~~~g---- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD-------------ELKRL-----RRPNVRFHG---- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS--------------HHCCH-----HHCTEEEE-----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH-------------HHHHh-----cCCCEEEcC----
Confidence 468999999999999999999 9999998889999999999763 12222 235899999
Q ss_pred cCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003655 649 RVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 649 ~v~~~el~~~ia~aaDvfV~PS~-~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l 726 (805)
++ +++..+++. +|+.+.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 ~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 55 589999996 999999986 67899999999999999999988 677777666678877 889999999997765
No 96
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.56 E-value=2e-13 Score=155.81 Aligned_cols=344 Identities=15% Similarity=0.158 Sum_probs=184.5
Q ss_pred HHHHHHHHcC-CCceEEEEcCCCchHHHHHHHH-HcCCcEEEEecCCCcccCC---CChhh-------hhhcccccccch
Q 003655 394 VAVEIAKELQ-GKPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAHALEKTKYP---DSDIY-------WKNLDDKYHFSC 461 (805)
Q Consensus 394 ~~~~i~~~l~-~kPDlIh~h~~~~~lva~llar-~lgip~v~t~H~l~~~k~~---~s~~~-------~~~~~~~y~f~~ 461 (805)
.+.++..... .+.-+.|+|-|..+.-..++.+ ...|..|+|.|+.-.-.+. ..+.| +...-..+....
T Consensus 131 fi~~f~~~~~~~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~ 210 (633)
T PF05693_consen 131 FIEEFYKFYEEKPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYH 210 (633)
T ss_dssp HHHHHHHH-S-SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HH
T ss_pred HHHHHHHhhcCCCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchH
Confidence 3334444433 3445668999987543333333 3467788999984221111 11111 222222334445
Q ss_pred hhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhh
Q 003655 462 QFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRL 541 (805)
Q Consensus 462 ~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl 541 (805)
+...|+.+.+.||+..|+|+-.+...+..++. .+. .|+|||+|.+.|....+.+...
T Consensus 211 k~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r----------------------~pD-vV~pNGl~v~~~~~~~efqnl~ 267 (633)
T PF05693_consen 211 KHSIERAAAHYADVFTTVSEITAKEAEHLLKR----------------------KPD-VVTPNGLNVDKFPALHEFQNLH 267 (633)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHHHHHHSS------------------------S-EE----B-GGGTSSTTHHHHHH
T ss_pred HHHHHHHHHHhcCeeeehhhhHHHHHHHHhCC----------------------CCC-EEcCCCccccccccchHHHHHH
Confidence 56678889999999999998776654443221 112 4789999998776554433211
Q ss_pred hcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeecc-CCCCHHHHHHHHHHhHcc----CCC---eEEEEEeCCCCC
Q 003655 542 KSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLD-RVKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRRK 613 (805)
Q Consensus 542 ~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~-~~Kgi~~LleA~~~l~~~----~~~---v~LvIVG~g~~~ 613 (805)
..-...|.+.+-+ ....++.+ ..++..+|++.||.+ +.||++.++||++++... ..+ +-|+|+=..-.
T Consensus 268 ~~~k~ki~~fv~~--~f~g~~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~- 343 (633)
T PF05693_consen 268 AKAKEKIHEFVRG--HFYGHYDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTN- 343 (633)
T ss_dssp HHHHHHHHHHHHH--HSTT---S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEE-
T ss_pred HHHHHHHHHHHHH--HhcccCCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccC-
Confidence 1111223222111 00011222 123456789999998 789999999999998531 222 33444433211
Q ss_pred CCccHHHH----------------------------------------------------------------------HH
Q 003655 614 ESKDLEEQ----------------------------------------------------------------------AE 623 (805)
Q Consensus 614 ~~~d~ee~----------------------------------------------------------------------~e 623 (805)
+...|.. ..
T Consensus 344 -~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~ 422 (633)
T PF05693_consen 344 -SFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDS 422 (633)
T ss_dssp -EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTT
T ss_pred -CcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCc
Confidence 1111110 01
Q ss_pred HHHHHHHHHhcCCC----C--cEEEecC---CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003655 624 MKKMYSLIDQYKLN----G--QFRWISS---QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK 694 (805)
Q Consensus 624 ~~~l~~li~~~~L~----~--~V~flG~---~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~ 694 (805)
.+.+-..+.+.++. + +|.|++. ..|.+-.-+.+.++.. +|+.|+||+||+||.|.+|+.++|+|+|.|+.
T Consensus 423 ~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnL 501 (633)
T PF05693_consen 423 NDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNL 501 (633)
T ss_dssp T-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETT
T ss_pred cCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccc
Confidence 22233334444442 2 3556541 2234444567788885 99999999999999999999999999999999
Q ss_pred ccccccccc-----CceEEEE-C--CCCHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 695 GGPAEIIVN-----GKSGYHI-D--PYHGEQAAEILVDFFEKC-KADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 695 GG~~EiI~d-----g~~G~l~-~--p~d~e~lA~aI~~~l~~l-~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
.|....+.+ ...|+.+ + ..+.++.++.|.+.+.++ ..++..+..+..++.+. .+..+|+....-|.+-|.
T Consensus 502 sGFG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~L-S~~~dW~~~~~yY~~Ay~ 580 (633)
T PF05693_consen 502 SGFGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERL-SDLADWKNFGKYYEKAYD 580 (633)
T ss_dssp BHHHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHH-GGGGBHHHHCHHHHHHHH
T ss_pred hhHHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHH
Confidence 998766543 3456644 3 346788888887776654 34666677776666554 489999999999988776
Q ss_pred Hh
Q 003655 766 VY 767 (805)
Q Consensus 766 ~~ 767 (805)
..
T Consensus 581 ~A 582 (633)
T PF05693_consen 581 LA 582 (633)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 97
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=3.2e-12 Score=135.57 Aligned_cols=376 Identities=13% Similarity=0.107 Sum_probs=232.5
Q ss_pred HHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHHH-H
Q 003655 318 LLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA-V 396 (805)
Q Consensus 318 a~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~-~ 396 (805)
|..|++.|.+|+ ++.-..+. ..+++...++++|+.+|--+......+.+ .. -+..|.+-.. -
T Consensus 33 A~Sla~~gf~Vd----liGy~~s~--------p~e~l~~hprI~ih~m~~l~~~~~~p~~~----~l-~lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVESI--------PLEELLNHPRIRIHGMPNLPFLQGGPRVL----FL-PLKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecCCC--------ChHHHhcCCceEEEeCCCCcccCCCchhh----hh-HHHHHHHHHHHH
Confidence 456899999999 66433211 23444445678999887654332211111 11 1122222111 1
Q ss_pred HHHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCCcc-cCCCChhhhhhcccccccchhhhHhHHHhhc
Q 003655 397 EIAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKT-KYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (805)
Q Consensus 397 ~i~~~l~~kPDlIh~h~~~~---~lva~llar~lgip~v~t~H~l~~~-k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 472 (805)
..+.. ...||+|....+++ -.++.+++...|.+++++.|.+..+ .... ......+. ..+....|...-+.
T Consensus 96 ~aL~~-~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~---~~g~~h~l--V~l~~~~E~~fgk~ 169 (444)
T KOG2941|consen 96 WALFV-LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKL---KLGFQHPL--VRLVRWLEKYFGKL 169 (444)
T ss_pred HHHHh-ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHh---hcCCCCch--HHHHHHHHHHhhcc
Confidence 11111 35899999888775 4567777788899999999987543 1000 00000111 11122346667778
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecC-----CccCCC----CCCCcH----HHH
Q 003655 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-----GADMSI----YFPYTE----EKR 539 (805)
Q Consensus 473 AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpn-----GVD~~~----f~p~~~----~~~ 539 (805)
||.-.|+|..+.+.+.+.+| |. +..|++. +.+.+. |.+... ...
T Consensus 170 a~~nLcVT~AMr~dL~qnWg-------------------i~----ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~a 226 (444)
T KOG2941|consen 170 ADYNLCVTKAMREDLIQNWG-------------------IN----RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRA 226 (444)
T ss_pred cccchhhHHHHHHHHHHhcC-------------------Cc----eeEEEecCCCCCCCchhHHHHHHhhhccccchhhh
Confidence 99999999998875555443 11 1112211 111110 111111 000
Q ss_pred hhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc-------cCCCeEEEEEeCCCC
Q 003655 540 RLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK-------LRELVNLVVVGGDRR 612 (805)
Q Consensus 540 rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~-------~~~~v~LvIVG~g~~ 612 (805)
| ....+..+...|..-+.....-. ......++++.....+..++..|++|+..-.+ ..|.+-.+|-|.||.
T Consensus 227 r-~~q~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl 304 (444)
T KOG2941|consen 227 R-EPQDKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL 304 (444)
T ss_pred c-ccccchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch
Confidence 0 00112222223322111000011 13334467778889999999999999984321 246778888888876
Q ss_pred CCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEe--CCC-CCCCcHHHHHHHHcCCcE
Q 003655 613 KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ--PAL-YEAFGLTVVEAMTCGLPT 689 (805)
Q Consensus 613 ~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~--PS~-~E~fGltvlEAMA~GlPV 689 (805)
.+++.+.++++++. +|.+.- .+...++...+++ ++|+.|+ +|. -=..|++|+...-||+||
T Consensus 305 -----------kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPv 368 (444)
T KOG2941|consen 305 -----------KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 368 (444)
T ss_pred -----------hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCce
Confidence 47788889998885 465554 2677778888888 5886664 443 233899999999999999
Q ss_pred EEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003655 690 FATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 690 VaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll 761 (805)
+|-+.....|+|+||+||++|+ |.+++|+.+..+++..-.|.+..+++.+++++. +.+.|+..-++..
T Consensus 369 cA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 369 CAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTA 436 (444)
T ss_pred eeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhh
Confidence 9999999999999999999997 899999999999987888999999999999987 5778876655443
No 98
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.53 E-value=1.4e-12 Score=147.07 Aligned_cols=250 Identities=15% Similarity=0.094 Sum_probs=153.8
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+|+++...+ ++.....++.+|+|+++.+ +.+. ..|.... -+...+.+|.|+|+++.
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~-------waw~~~~-----------~r~l~~~~d~v~~~~~~ 148 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQV-------WAWRKWR-----------AKKIEKATDFLLAILPF 148 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcH-------hhcCcch-----------HHHHHHHHhHhhccCCC
Confidence 5899999877644 5556668888999987544 1111 1121110 12355789999999977
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 562 (805)
+.+..++ . ..+..++.|++-.......... ...++.+
T Consensus 149 e~~~~~~--------------------~-----g~~~~~vGnPv~~~~~~~~~~~------------------~~~r~~l 185 (385)
T TIGR00215 149 EKAFYQK--------------------K-----NVPCRFVGHPLLDAIPLYKPDR------------------KSAREKL 185 (385)
T ss_pred cHHHHHh--------------------c-----CCCEEEECCchhhhccccCCCH------------------HHHHHHc
Confidence 6542110 1 1245567776633221100111 1123457
Q ss_pred ccccCCCCcEEEEEe--eccC-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCc
Q 003655 563 CVLKDRNKPILFTMA--RLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 639 (805)
Q Consensus 563 G~l~~~~k~iIl~vG--RL~~-~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~ 639 (805)
|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.... ..+.+.++.+.++...+
T Consensus 186 gl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~----------~~~~~~~~~~~~~~~~~ 253 (385)
T TIGR00215 186 GI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK----------RRLQFEQIKAEYGPDLQ 253 (385)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch----------hHHHHHHHHHHhCCCCc
Confidence 77 66778877663 7776 6899999999999988788898877654421 12345556666666667
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-cccc----------------ccccc
Q 003655 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGP----------------AEIIV 702 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~-~GG~----------------~EiI~ 702 (805)
|.+.+ +++..+|+ ++|++|.+| |.+.+|||+||+|+|.+. .+.. +.++.
T Consensus 254 v~~~~--------~~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~ 319 (385)
T TIGR00215 254 LHLID--------GDARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILA 319 (385)
T ss_pred EEEEC--------chHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhc
Confidence 77665 24567888 599999999 888889999999999872 2211 12222
Q ss_pred cCceEE-EE-CCCCHHHHHHHHHHHHHHhhCCH----HHHHHHHHHHHH
Q 003655 703 NGKSGY-HI-DPYHGEQAAEILVDFFEKCKADP----SYWDKISLGGLK 745 (805)
Q Consensus 703 dg~~G~-l~-~p~d~e~lA~aI~~~l~~l~~dp----~~~~~ms~~ar~ 745 (805)
+..-.- ++ +.-+++.+++.+.+++ .|+ +.++++.+.-.+
T Consensus 320 ~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 320 NRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred CCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHHH
Confidence 211111 11 2235777888885554 888 877777665444
No 99
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.37 E-value=3.6e-12 Score=113.88 Aligned_cols=92 Identities=22% Similarity=0.397 Sum_probs=85.1
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003655 665 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 665 vfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
+++.|+..++++..++|+||||+|+|+++.++..+++.+|..++.++ |++++++++..++ +||+.+++|+++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 45778889999999999999999999999999999999999999998 8999999996555 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 003655 745 KRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 745 ~~v~e~ysw~~~a~rll~ 762 (805)
+++.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999863
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.31 E-value=1.4e-10 Score=133.36 Aligned_cols=323 Identities=15% Similarity=0.153 Sum_probs=180.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhh
Q 003655 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMN 471 (805)
Q Consensus 393 ~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 471 (805)
..+..+....+ .-|+|..|.....+++..+.++ ...++.+-.|...+ .+++. +.+ + ....-+..|-
T Consensus 130 ~FA~~i~~~~~-~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFP----s~e~f-r~l-P------~r~eiL~glL 196 (474)
T PF00982_consen 130 RFADAIAEVYR-PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFP----SSEIF-RCL-P------WREEILRGLL 196 (474)
T ss_dssp HHHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHHH-TTS-T------THHHHHHHHT
T ss_pred HHHHHHHHhCc-CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCC----CHHHH-hhC-C------cHHHHHHHhh
Confidence 33444444433 6789999988877777777765 45778888887432 22221 111 1 1111234677
Q ss_pred cCCEEEecCHHHHhhccccccccccccccccccceeeec--cCCCCCC--cEEEecCCccCCCCCCCcHHHHhhhcCchh
Q 003655 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH--GIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLKSFHPE 547 (805)
Q Consensus 472 ~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~--gI~~~~~--ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~ 547 (805)
.||.|-..|+..+..+....... -++-.... ++.+... ++.+.|-|||.+.|......+.- ...
T Consensus 197 ~aDlIgFqt~~~~~nFl~~~~r~--------lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v----~~~ 264 (474)
T PF00982_consen 197 GADLIGFQTFEYARNFLSCCKRL--------LGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEV----QER 264 (474)
T ss_dssp TSSEEEESSHHHHHHHHHHHHHH--------S-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S-------HH
T ss_pred cCCEEEEecHHHHHHHHHHHHHH--------cCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHH----HHH
Confidence 99999999987766443332111 01111111 2322222 46778999998765322111000 000
Q ss_pred hHHhhcchhhhhhhhccccCCC-CcEEEEEeeccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccHHHHH
Q 003655 548 IEELLYSDVENKEHLCVLKDRN-KPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQA 622 (805)
Q Consensus 548 i~~~l~~~~~~~~~lG~l~~~~-k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~----~v~LvIVG~g~~~~~~d~ee~~ 622 (805)
+ ...++.+ .+ ..+|+.+.|++..||+..=+.||.++.+.+| ++.|+-++-.... ...+...
T Consensus 265 ~-------~~l~~~~-----~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~--~~~~y~~ 330 (474)
T PF00982_consen 265 A-------EELREKF-----KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRE--DVPEYQE 330 (474)
T ss_dssp H-------HHHHHHT-----TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-ST--TSHHHHH
T ss_pred H-------HHHHHhc-----CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCc--cchhHHH
Confidence 0 0111222 23 4899999999999999999999999877655 4788877764332 2233344
Q ss_pred HHHHHHHHHHh----cCCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEc
Q 003655 623 EMKKMYSLIDQ----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFAT 692 (805)
Q Consensus 623 e~~~l~~li~~----~~L~~--~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlP----VVaT 692 (805)
..+++.+++.+ +|-.+ -|.++. ..++.++++.+++. +|+++.+|..+|..++..|+.+|-.+ +|.|
T Consensus 331 ~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLS 406 (474)
T PF00982_consen 331 LRREVEELVGRINGKYGTPDWTPIIYIY---RSLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLILS 406 (474)
T ss_dssp HHHHHHHHHHHHHHHH-BTTB-SEEEE----S---HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEEE
T ss_pred HHHHHHHHHHHHHhhcccCCceeEEEEe---cCCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEee
Confidence 44555555543 44332 366664 26789999999995 99999999999999999999999875 7778
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 693 CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 693 ~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
...|.++.+.++ .++++|.|.+++|++|.++++ ..++.++...+..++.+ ..+|-..+++++++-.
T Consensus 407 efaGaa~~L~~~--al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 407 EFAGAAEQLSEA--ALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp TTBGGGGT-TTS---EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred ccCCHHHHcCCc--cEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 899998888543 589999999999999998774 56777777777778877 7899998888887643
No 101
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.26 E-value=1.1e-11 Score=119.32 Aligned_cols=160 Identities=14% Similarity=0.219 Sum_probs=84.7
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccc
Q 003655 300 GGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWIS 379 (805)
Q Consensus 300 GG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~is 379 (805)
||.+.|+. +|+++|.++||+|+ |+|...++.. .+ ....++.+.++|+......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED-------DE--EEEDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG--------S--EEETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc-------cc--cccCCceEEeccCCccchh------
Confidence 89999999 77777899999999 9986543321 11 1123688888887643210
Q ss_pred cccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhccccccc
Q 003655 380 RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHF 459 (805)
Q Consensus 380 r~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f 459 (805)
...+.. ...+.+.+ .....+||+||+|++..++++.++++..++|+|+++|+...... ..|.. .+
T Consensus 54 -~~~~~~----~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~-----~~ 118 (160)
T PF13579_consen 54 -LRLLRF----LRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKR-----RL 118 (160)
T ss_dssp -GGHCCH----HHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH-----HH
T ss_pred -hhhHHH----HHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchhh-----HH
Confidence 111111 11222222 22356899999999766677777776889999999998432110 11110 01
Q ss_pred chhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCC
Q 003655 460 SCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 525 (805)
Q Consensus 460 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnG 525 (805)
. ...++..++.||.|+++|+...+.+.+ .|++ .+|+.|||||
T Consensus 119 ~--~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 119 Y--RWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp H--HHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred H--HHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 1 123667899999999999988774322 3444 7799999998
No 102
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.25 E-value=3.9e-11 Score=117.44 Aligned_cols=168 Identities=17% Similarity=0.249 Sum_probs=84.2
Q ss_pred CCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCccccc
Q 003655 297 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRK 376 (805)
Q Consensus 297 pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~ 376 (805)
+..||.+.|+. +|+++|+++||+|+ |+|....+..... ........+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~-----------~~~~~~~~~~~~~------ 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE-----------LVKIFVKIPYPIR------ 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST-----------EEEE---TT-SST------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh-----------ccceeeeeecccc------
Confidence 45799999999 67777799999999 9887654432111 0011111111110
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccc
Q 003655 377 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDK 456 (805)
Q Consensus 377 ~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~ 456 (805)
............+.+.+.+. +||+||+|.+.....+....+ ++|.|.+.|+..... ..+......
T Consensus 60 -----~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~-----~~~~~~~~~ 124 (177)
T PF13439_consen 60 -----KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER-----RFLKSKLSP 124 (177)
T ss_dssp -----SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H-----HTTTTSCCC
T ss_pred -----cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc-----cccccccch
Confidence 01111112222333333333 799999998766444444444 999999999854210 000000000
Q ss_pred cccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCC
Q 003655 457 YHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 531 (805)
Q Consensus 457 y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f 531 (805)
+.... ........+.+|.+||+|...++.+.+ .|++ +.|+.|||||||++.|
T Consensus 125 ~~~~~-~~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 125 YSYLN-FRIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHH-HCTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH
T ss_pred hhhhh-hhhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHc
Confidence 00000 011233478999999999988875433 2444 6799999999999877
No 103
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.23 E-value=1.1e-08 Score=114.14 Aligned_cols=248 Identities=14% Similarity=0.083 Sum_probs=139.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 403 ~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
+.+||+||++....+..+.++++.+++|.++.-.+... . .+-++....++.|.++-+.
T Consensus 89 ~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~------g----------------~~nr~~~~~a~~v~~~f~~ 146 (352)
T PRK12446 89 KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP------G----------------LANKIALRFASKIFVTFEE 146 (352)
T ss_pred hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc------c----------------HHHHHHHHhhCEEEEEccc
Confidence 35899999987666677789999999998653332110 0 1123567788888765432
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~l 562 (805)
... +++ ..|+.++.|.|..+...+... ..++.+
T Consensus 147 ~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~~--------------------~~~~~~ 179 (352)
T PRK12446 147 AAK-------------------------HLP--KEKVIYTGSPVREEVLKGNRE--------------------KGLAFL 179 (352)
T ss_pred hhh-------------------------hCC--CCCeEEECCcCCcccccccch--------------------HHHHhc
Confidence 211 122 357777777776644322111 112346
Q ss_pred ccccCCCCcEEEEEeeccCCCCHHH-HHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEE
Q 003655 563 CVLKDRNKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFR 641 (805)
Q Consensus 563 G~l~~~~k~iIl~vGRL~~~Kgi~~-LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~ 641 (805)
|+ ++++++|+.+|.=.-.+.+.. +.+++..+. ++++++++-+..+ +.+....+ .++.
T Consensus 180 ~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~~--------------~~~~~~~~---~~~~ 237 (352)
T PRK12446 180 GF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKGN--------------LDDSLQNK---EGYR 237 (352)
T ss_pred CC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCch--------------HHHHHhhc---CCcE
Confidence 65 567777777764222344432 333444432 2467666554321 11111111 1333
Q ss_pred EecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-----c----cccccccCceEEEECC
Q 003655 642 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-----G----PAEIIVNGKSGYHIDP 712 (805)
Q Consensus 642 flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G-----G----~~EiI~dg~~G~l~~p 712 (805)
..++. .+++..+|+. +|++|.= +-+.|+.|++++|+|.|..... + .++.+.+...|..+..
T Consensus 238 ~~~f~-----~~~m~~~~~~-adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~ 307 (352)
T PRK12446 238 QFEYV-----HGELPDILAI-TDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYE 307 (352)
T ss_pred Eecch-----hhhHHHHHHh-CCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcch
Confidence 34422 2468888885 9999874 3478999999999999997442 1 1224444445666543
Q ss_pred C--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003655 713 Y--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 713 ~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~L 763 (805)
. +++.+++.+.++ +.|++.+++ ..+++.....++++.++
T Consensus 308 ~~~~~~~l~~~l~~l----l~~~~~~~~--------~~~~~~~~~aa~~i~~~ 348 (352)
T PRK12446 308 EDVTVNSLIKHVEEL----SHNNEKYKT--------ALKKYNGKEAIQTIIDH 348 (352)
T ss_pred hcCCHHHHHHHHHHH----HcCHHHHHH--------HHHHcCCCCHHHHHHHH
Confidence 2 467777777554 478765432 12334555555555544
No 104
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.20 E-value=3.9e-09 Score=120.34 Aligned_cols=325 Identities=14% Similarity=0.094 Sum_probs=210.0
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhh
Q 003655 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMN 471 (805)
Q Consensus 393 ~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~ 471 (805)
.....+....+ .-|+|..|.....+++..+.++ ...++.+-.|.. ++.+++.. .+ + +...-...|-
T Consensus 112 ~FA~~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiP----FPs~eifr-~L-P------~r~eil~glL 178 (474)
T PRK10117 112 LLADKLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIP----FPTPEIFN-AL-P------PHDELLEQLC 178 (474)
T ss_pred HHHHHHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCC----CCChHHHh-hC-C------ChHHHHHHHH
Confidence 33344444433 4589999988877777777654 346777788864 33333221 11 1 1111234677
Q ss_pred cCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHh
Q 003655 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (805)
Q Consensus 472 ~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~ 551 (805)
.+|.|-.-|+..+..+.+......... ...+......|- .-++.+.|-|||.+.|......... ..+
T Consensus 179 ~aDlIGFqt~~y~rnFl~~~~~~lg~~--~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~-----~~~--- 245 (474)
T PRK10117 179 DYDLLGFQTENDRLAFLDCLSNLTRVT--TRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLP-----PKL--- 245 (474)
T ss_pred hCccceeCCHHHHHHHHHHHHHHcCCc--ccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHH-----HHH---
Confidence 899998888876654433221110000 000000000010 1256778999998776432111000 000
Q ss_pred hcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccHHHHHHHHHH
Q 003655 552 LYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAEMKKM 627 (805)
Q Consensus 552 l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~----~v~LvIVG~g~~~~~~d~ee~~e~~~l 627 (805)
...++.+ .++.+|+.+.|+|..||+..=++||.++.+.+| ++.|+-++-. +.+.-.+......++
T Consensus 246 ----~~lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p--sR~~v~~Y~~l~~~v 314 (474)
T PRK10117 246 ----AQLKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT--SRGDVQAYQDIRHQL 314 (474)
T ss_pred ----HHHHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC--CCCccHHHHHHHHHH
Confidence 0112222 357799999999999999999999999887766 4678877633 222233444555566
Q ss_pred HHHHHhcCC----CC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-----cEEEcCccc
Q 003655 628 YSLIDQYKL----NG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCKGG 696 (805)
Q Consensus 628 ~~li~~~~L----~~--~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~Gl-----PVVaT~~GG 696 (805)
.+++.+.+- .+ -|+++- ..++.+++..+|+ ++|+++.++..+|+.|+.-|+.||-. +.|.|...|
T Consensus 315 ~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAG 390 (474)
T PRK10117 315 ETEAGRINGKYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG 390 (474)
T ss_pred HHHHHHHHhccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecccc
Confidence 666654432 22 245443 3678899999999 49999999999999999999999975 378899999
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 697 PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 697 ~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
.++.+. ..+++||.|.+++|++|.++++ ..++.+++.-+..++.+ .++|...+++.+++-..
T Consensus 391 aA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 391 AANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred hHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 988884 3789999999999999998874 56777777777777777 78899999998887543
No 105
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.19 E-value=4.2e-08 Score=109.14 Aligned_cols=239 Identities=13% Similarity=0.125 Sum_probs=148.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.+||+|++........+.+++..+|+|+++.-.+... ...|+ +..+.|+.|.+.-...
T Consensus 90 ~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank----------------~~~~~a~~V~~~f~~~ 147 (357)
T COG0707 90 LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK----------------ILSKFAKKVASAFPKL 147 (357)
T ss_pred cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH----------------HhHHhhceeeeccccc
Confidence 4799999988777788888999999999876655322 11222 3445667665543221
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhc
Q 003655 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 563 (805)
Q Consensus 484 ~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG 563 (805)
. .+.+ +.++.++.|.+..+... ......+. .+
T Consensus 148 ~-------------------------~~~~--~~~~~~tG~Pvr~~~~~-~~~~~~~~--------------------~~ 179 (357)
T COG0707 148 E-------------------------AGVK--PENVVVTGIPVRPEFEE-LPAAEVRK--------------------DG 179 (357)
T ss_pred c-------------------------ccCC--CCceEEecCcccHHhhc-cchhhhhh--------------------hc
Confidence 1 1222 45788888877766554 22221111 11
Q ss_pred cccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC-CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 564 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE-LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 564 ~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~-~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
..++++|+.+|. ..|...+-+++..+..... +++++...+... .+++...-.+++. ++.
T Consensus 180 ---~~~~~~ilV~GG---S~Ga~~ln~~v~~~~~~l~~~~~v~~~~G~~~-----------~~~~~~~~~~~~~---~~v 239 (357)
T COG0707 180 ---RLDKKTILVTGG---SQGAKALNDLVPEALAKLANRIQVIHQTGKND-----------LEELKSAYNELGV---VRV 239 (357)
T ss_pred ---cCCCcEEEEECC---cchhHHHHHHHHHHHHHhhhCeEEEEEcCcch-----------HHHHHHHHhhcCc---EEE
Confidence 126777777775 2333334444333332212 466666665521 3444444444443 677
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECCCC
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP--------AEIIVNGKSGYHIDPYH 714 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~--------~EiI~dg~~G~l~~p~d 714 (805)
.++. ++|.++|+. +|+.|.= +=++|+.|..++|+|+|--..+.. +..+++...|..++-.+
T Consensus 240 ~~f~------~dm~~~~~~-ADLvIsR----aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~ 308 (357)
T COG0707 240 LPFI------DDMAALLAA-ADLVISR----AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSE 308 (357)
T ss_pred eeHH------hhHHHHHHh-ccEEEeC----CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecccc
Confidence 7633 358889995 9999974 347899999999999999644433 33445555677776444
Q ss_pred --HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003655 715 --GEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 715 --~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v 747 (805)
++.+++.|.+++ ++|+..++|++++++..
T Consensus 309 lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 309 LTPEKLAELILRLL----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 778888886555 89999999999998875
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.17 E-value=4.6e-09 Score=128.37 Aligned_cols=335 Identities=14% Similarity=0.145 Sum_probs=212.8
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchh
Q 003655 384 WPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQ 462 (805)
Q Consensus 384 ~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~ 462 (805)
|.......+.....+.......-|+|..|.....++...+.++ ...++.+..|.. +|.+.++.. .-+
T Consensus 180 w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiP----FPs~eifr~--------LP~ 247 (854)
T PLN02205 180 WQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSP----FPSSEIYKT--------LPI 247 (854)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCC----CCChHHHhh--------CCc
Confidence 4333333334444455544321389999988887777777665 457888888875 333333211 111
Q ss_pred hhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC--cEEEecCCccCCCCCCCc---HH
Q 003655 463 FTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYT---EE 537 (805)
Q Consensus 463 ~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~--ki~VIpnGVD~~~f~p~~---~~ 537 (805)
...-+..|-.||.|=.-|+..+..+.......... ..... +...++.+... ++.+.|-|||...|.... +.
T Consensus 248 r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl-~~~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~ 323 (854)
T PLN02205 248 REELLRALLNSDLIGFHTFDYARHFLSCCSRMLGL-SYESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPET 323 (854)
T ss_pred HHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCC-cccCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhH
Confidence 12223477799999999987766443322111000 00000 00012222222 467789999987763321 11
Q ss_pred HHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCC
Q 003655 538 KRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRK 613 (805)
Q Consensus 538 ~~rl~~~~~~i~~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~----v~LvIVG~g~~~ 613 (805)
..+.. ..++.++ .+++.+|+.+.|++..||+..=+.||.++.+.+|. +.|+-+.-...
T Consensus 324 ~~~~~--------------~l~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr- 385 (854)
T PLN02205 324 EAKVK--------------ELIKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR- 385 (854)
T ss_pred HHHHH--------------HHHHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC-
Confidence 11111 1122222 24678999999999999999999999999887775 46776664432
Q ss_pred CCccHHHHHHHHHHHHHHHhc----CCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC
Q 003655 614 ESKDLEEQAEMKKMYSLIDQY----KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL 687 (805)
Q Consensus 614 ~~~d~ee~~e~~~l~~li~~~----~L~~--~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~Gl 687 (805)
+...+..+...++.+++.+. |-.+ .|+++- ..++..|+..+|+ .||+++.++..+|+.|+..|+.+|..
T Consensus 386 -~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~ 460 (854)
T PLN02205 386 -GKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQ 460 (854)
T ss_pred -cccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEcc
Confidence 22233344445555555543 3222 366664 2678999999999 59999999999999999999999864
Q ss_pred -------------------cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003655 688 -------------------PTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 748 (805)
Q Consensus 688 -------------------PVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 748 (805)
..|.|.+.|.+..+. ..++++|.|.+++|++|.+++. ..++.++.--+..++++
T Consensus 461 ~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v- 533 (854)
T PLN02205 461 GNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV- 533 (854)
T ss_pred CccccccccccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-
Confidence 367788888877773 3789999999999999998874 55666666666677777
Q ss_pred HhCCHHHHHHHHHHHH
Q 003655 749 EKYTWKIYSQRLLTLT 764 (805)
Q Consensus 749 e~ysw~~~a~rll~Ly 764 (805)
.++|-..+++.++.-.
T Consensus 534 ~~~d~~~W~~~fl~~l 549 (854)
T PLN02205 534 STHDVGYWARSFLQDL 549 (854)
T ss_pred hhCCHHHHHHHHHHHH
Confidence 7889888888877643
No 107
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.14 E-value=7e-09 Score=118.34 Aligned_cols=144 Identities=10% Similarity=0.085 Sum_probs=111.2
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCc
Q 003655 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 570 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~ 649 (805)
+..+++++. +..++++.++.+..|++.|.| |.+.+ ...+|.++ +++ ++.+.+.|..+
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te----------~s~kL~~L-~~y--~nvvly~~~~~-- 338 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE----------MSSKLMSL-DKY--DNVKLYPNITT-- 338 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc----------ccHHHHHH-Hhc--CCcEEECCcCh--
Confidence 345666661 999999999999899999999 76643 12577777 666 55666666333
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 003655 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEK 728 (805)
Q Consensus 650 v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G-G~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~ 728 (805)
..+-.++.+ ||+++..|..|+|++++.||++.|+|+++.+.. |+.+++.+ |.+++++|+++|+++|.+++
T Consensus 339 ---~~l~~ly~~-~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL-- 409 (438)
T TIGR02919 339 ---QKIQELYQT-CDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL-- 409 (438)
T ss_pred ---HHHHHHHHh-ccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh--
Confidence 356666664 999999999999999999999999999997443 67788866 88999999999999997765
Q ss_pred hhCCHHHHHHHHHHHHHHH
Q 003655 729 CKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 729 l~~dp~~~~~ms~~ar~~v 747 (805)
.||+.+++.-..-++.+
T Consensus 410 --~d~~~~~~~~~~q~~~a 426 (438)
T TIGR02919 410 --NDPNQFRELLEQQREHA 426 (438)
T ss_pred --cCHHHHHHHHHHHHHHh
Confidence 89987766554444443
No 108
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.05 E-value=5.2e-08 Score=110.85 Aligned_cols=327 Identities=15% Similarity=0.102 Sum_probs=207.5
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHh
Q 003655 392 EDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM 470 (805)
Q Consensus 392 ~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~l-gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~ 470 (805)
......+....+ .=|+|..|.....++...+..+. ..++.+..|...+ .+.+.. ... +...-...+
T Consensus 135 ~~FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfP----ssEvfr-----~lP---~r~eIl~gl 201 (486)
T COG0380 135 RKFADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFP----SSEVFR-----CLP---WREEILEGL 201 (486)
T ss_pred HHHHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCC----CHHHHh-----hCc---hHHHHHHHh
Confidence 344445555444 44999999888777777776654 4567778887533 232221 000 111112367
Q ss_pred hcCCEEEecCHHHHhhccccccccccccccccccceeeec-cCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhH
Q 003655 471 NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH-GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIE 549 (805)
Q Consensus 471 ~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~-gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~ 549 (805)
-.+|+|-.-++..+..+.+...+-.. ++ +...+.. |.+....++..+|=|||...|......+... ..+.
T Consensus 202 l~~dligFqt~~y~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~----~~~~ 272 (486)
T COG0380 202 LGADLIGFQTESYARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQ----EKVL 272 (486)
T ss_pred hcCCeeEecCHHHHHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchh----hHHH
Confidence 79999988888776644433322110 00 0000111 1110012456689999987664322110000 0000
Q ss_pred HhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccHHHHHHHH
Q 003655 550 ELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAEMK 625 (805)
Q Consensus 550 ~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~----~v~LvIVG~g~~~~~~d~ee~~e~~ 625 (805)
+.++.+ ..++.+|+.+.|+|..||+..=+.||.++.+.+| ++.|+-++.... ....+......
T Consensus 273 -------el~~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr--~~v~~y~~~~~ 339 (486)
T COG0380 273 -------ELKAEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR--EDVEEYQALRL 339 (486)
T ss_pred -------HHHHHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc--cccHHHHHHHH
Confidence 111112 2348899999999999999999999999987665 467777776543 12223333444
Q ss_pred HHHHHHHhcCC-CCc-----EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCcc
Q 003655 626 KMYSLIDQYKL-NGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKG 695 (805)
Q Consensus 626 ~l~~li~~~~L-~~~-----V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~G----lPVVaT~~G 695 (805)
++..++.+.+- -+. |.++- ..++..+++.+++. +|+++.+++.||+.++..|+.||- =|.|-|...
T Consensus 340 ~i~~~V~rIN~~fG~~~~~Pv~~l~---~~~~~~~l~al~~~-aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFa 415 (486)
T COG0380 340 QIEELVGRINGEFGSLSWTPVHYLH---RDLDRNELLALYRA-ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFA 415 (486)
T ss_pred HHHHHHHHHHhhcCCCCcceeEEEe---ccCCHHHHHHHHhh-hceeeeccccccccHHHHHHHHhhcCCCCcEEEeccc
Confidence 55555544321 122 44443 25788999999995 999999999999999999999984 478888888
Q ss_pred ccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 696 GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 696 G~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
|.+..+.+ .++++|.|.+++|++|.+++. ..++.+++.-+..++.+ .++|-..++..++.-.
T Consensus 416 Gaa~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l 477 (486)
T COG0380 416 GAASELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDDL 477 (486)
T ss_pred cchhhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 88887754 789999999999999998875 67777777777777777 7888888888876643
No 109
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.99 E-value=9.8e-08 Score=107.75 Aligned_cols=123 Identities=18% Similarity=0.092 Sum_probs=79.5
Q ss_pred CCCcEEEEEeeccC---CCCHHHHHHHHHHhHccCCCeEEE-EEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEe
Q 003655 568 RNKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI 643 (805)
Q Consensus 568 ~~k~iIl~vGRL~~---~Kgi~~LleA~~~l~~~~~~v~Lv-IVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~fl 643 (805)
...+++++.|+... .+-...+++++... +.+++ .+|..... . ..+.++|.+.
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~------------~-------~~~~~~v~~~ 293 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLG------------A-------EDLPDNVRVV 293 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCcccc------------c-------cCCCCceEEe
Confidence 44567788888754 22334445555443 34444 44544321 0 2456789999
Q ss_pred cCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHHH
Q 003655 644 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHIDPY--HGEQ 717 (805)
Q Consensus 644 G~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG----~~EiI~dg~~G~l~~p~--d~e~ 717 (805)
+ +++..+++. .+|++|.- |-..|+.||+++|+|+|....++ .++.++....|..+++. +.++
T Consensus 294 ~----~~p~~~ll~----~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~ 361 (401)
T cd03784 294 D----FVPHDWLLP----RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAER 361 (401)
T ss_pred C----CCCHHHHhh----hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHHH
Confidence 8 666666655 59999954 33469999999999999986655 34455555678777655 5788
Q ss_pred HHHHHHHHH
Q 003655 718 AAEILVDFF 726 (805)
Q Consensus 718 lA~aI~~~l 726 (805)
+++++.+++
T Consensus 362 l~~al~~~l 370 (401)
T cd03784 362 LAAALRRLL 370 (401)
T ss_pred HHHHHHHHh
Confidence 888886554
No 110
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.89 E-value=3.5e-08 Score=99.43 Aligned_cols=182 Identities=20% Similarity=0.209 Sum_probs=116.6
Q ss_pred cceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeec
Q 003655 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355 (805)
Q Consensus 276 ~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~ 355 (805)
|.||+||...|.|.. -||.|..+. +|+.+|+++||+|+ |.|+...... . ..
T Consensus 1 mkkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EF 51 (185)
T ss_pred CceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Cc
Confidence 468999999998653 499999999 88889999999999 9987632211 1 12
Q ss_pred CccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC-chHHHHHHHH--HcCCcEE
Q 003655 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSD-GNIVASLLAH--KLGVTQC 432 (805)
Q Consensus 356 ~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~-~~lva~llar--~lgip~v 432 (805)
...|++++.+|.... |. .....|-......++. ..+.-+.+.|+||.+... ++++..++.+ +.|.|++
T Consensus 52 ~y~gv~l~~i~~~~~-g~-------~~si~yd~~sl~~al~-~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~ 122 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKN-GS-------AESIIYDFLSLLHALR-FIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVV 122 (185)
T ss_pred ccCCeEEEEeCCCCC-Cc-------hHHHHHHHHHHHHHHH-HHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEE
Confidence 345789999887532 21 1111110000011111 111112357899987766 5555555544 3477999
Q ss_pred EEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003655 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (805)
Q Consensus 433 ~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI 512 (805)
+..|++|-.. ..|..+...|- ...|..+.+.||.+|+-|....+..++..+
T Consensus 123 vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~y~-------------------- 173 (185)
T PF09314_consen 123 VNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKERYG-------------------- 173 (185)
T ss_pred ECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHHcC--------------------
Confidence 9999986432 35655554442 246888999999999999887664433311
Q ss_pred CCCCCcEEEecCCcc
Q 003655 513 DVFDPKFNIVSPGAD 527 (805)
Q Consensus 513 ~~~~~ki~VIpnGVD 527 (805)
..+..+|++|+|
T Consensus 174 ---~~~s~~IaYGad 185 (185)
T PF09314_consen 174 ---RKKSTFIAYGAD 185 (185)
T ss_pred ---CCCcEEecCCCC
Confidence 367889999987
No 111
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.86 E-value=1.8e-06 Score=97.43 Aligned_cols=111 Identities=21% Similarity=0.252 Sum_probs=73.3
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----ccccccCceEEEEC
Q 003655 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEIIVNGKSGYHID 711 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~----~EiI~dg~~G~l~~ 711 (805)
+.++|.+.+ +++..++ +. .+|++|..+- . .|+.||+++|+|+|+....+- .+.+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~l---l~-~~~~~I~hgG---~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLEI---LK-KADAFITHGG---M-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHHH---Hh-hCCEEEECCC---c-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457899888 6665554 45 5999997642 3 489999999999999754432 33445555777776
Q ss_pred CC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003655 712 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 712 p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~L 763 (805)
.. ++++++++|.+++ .|++.++++.+- .+.+...-.-+..++.++++
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM-RAEIREAGGARRAADEIEGF 389 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHh
Confidence 43 5678888886555 898877666443 33343445666666666554
No 112
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.85 E-value=6.7e-09 Score=110.06 Aligned_cols=186 Identities=15% Similarity=0.119 Sum_probs=101.7
Q ss_pred eEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcc-ccceeee--
Q 003655 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTC-GQRLEKV-- 354 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~-~~~~e~i-- 354 (805)
||+++|.-..| --.+||...++. .|+++|+++||+|. |+++.+........ ...+...
T Consensus 1 kIl~vt~E~~P-------~~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAP-------FAKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTT-------TB-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCc-------ccccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 78999877652 247899999999 66667799999999 99887532111000 0000000
Q ss_pred --------c----------CccCeEEEEeccccCCcccccccccccch--------hhHHHH--HHHHHHHHHHHcCCCc
Q 003655 355 --------Y----------GTKYSDILRVPFRTEKGVVRKWISRFEVW--------PYLETY--TEDVAVEIAKELQGKP 406 (805)
Q Consensus 355 --------~----------~~~~v~I~rvp~~~~~~~~~~~isr~~i~--------~~l~~f--~~~~~~~i~~~l~~kP 406 (805)
. ..+++.++-+.-.. +..+..++ .-.++| ...+..++...++.+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 0 01234433332111 11111222 112222 2334444454455689
Q ss_pred eEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCCcccCCCC-h-----hhhhh--cccccccchhhhHhHHHhh
Q 003655 407 DLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYPDS-D-----IYWKN--LDDKYHFSCQFTADLIAMN 471 (805)
Q Consensus 407 DlIh~h~~~~~lva~llar~l-------gip~v~t~H~l~~~k~~~s-~-----~~~~~--~~~~y~f~~~~~~e~~a~~ 471 (805)
||||+|.|.+++++.+++... ++|.|+|+|+++....... . +.+.. ....+.+...+...+.++.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999999888875 5999999999765432211 1 11111 1122333445555678999
Q ss_pred cCCEEEecCHHHHhhccc
Q 003655 472 HTDFIITSTFQEIAGSKD 489 (805)
Q Consensus 472 ~AD~IIt~S~~~~~~~~~ 489 (805)
.||.|+|+|+..++.+..
T Consensus 215 ~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 215 YADKVTTVSPTYAREIQT 232 (245)
T ss_dssp HSSEEEESSHHHHHHTTS
T ss_pred hcCEeeeCCHHHHHHHhC
Confidence 999999999998775443
No 113
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.77 E-value=1.9e-06 Score=97.68 Aligned_cols=271 Identities=15% Similarity=0.145 Sum_probs=152.3
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEE-EecCCCcccCCCChhhhhhcccccc-cchh----hhHhHHHhhcCCEE
Q 003655 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYH-FSCQ----FTADLIAMNHTDFI 476 (805)
Q Consensus 403 ~~kPDlIh~h~~~~~lva~llar~lgip~v~-t~H~l~~~k~~~s~~~~~~~~~~y~-f~~~----~~~e~~a~~~AD~I 476 (805)
..+||+|.+. |++++.++|+..|+|+++ -.|-. ..+..+...| ...+.|+ +... +..-++.-+.|+.|
T Consensus 91 ~~~p~~v~~~---Gg~v~~~aA~~~~~p~~~~~~~es--n~~~~~~~~~-~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v 164 (396)
T TIGR03492 91 AKKGDLIVAV---GDIVPLLFAWLSGKPYAFVGTAKS--DYYWESGPRR-SPSDEYHRLEGSLYLPWERWLMRSRRCLAV 164 (396)
T ss_pred hhcCCEEEEE---CcHHHHHHHHHcCCCceEEEeecc--ceeecCCCCC-ccchhhhccCCCccCHHHHHHhhchhhCEE
Confidence 3489999987 456678888889999876 22421 1121111111 1111111 0000 00123445688999
Q ss_pred EecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchh
Q 003655 477 ITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV 556 (805)
Q Consensus 477 It~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~ 556 (805)
.+......+..++ + ..++.++-|.+=........
T Consensus 165 ~~~~~~t~~~l~~--------------------~-----g~k~~~vGnPv~d~l~~~~~--------------------- 198 (396)
T TIGR03492 165 FVRDRLTARDLRR--------------------Q-----GVRASYLGNPMMDGLEPPER--------------------- 198 (396)
T ss_pred eCCCHHHHHHHHH--------------------C-----CCeEEEeCcCHHhcCccccc---------------------
Confidence 8888665542111 1 22566676654222111100
Q ss_pred hhhhhhccccCCCCcEE-EEEeec-c-CCCCHHHHHHHHHHhHccCCCeEEEEEe-CCCCCCCccHHHHHHHHHHHHHHH
Q 003655 557 ENKEHLCVLKDRNKPIL-FTMARL-D-RVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMYSLID 632 (805)
Q Consensus 557 ~~~~~lG~l~~~~k~iI-l~vGRL-~-~~Kgi~~LleA~~~l~~~~~~v~LvIVG-~g~~~~~~d~ee~~e~~~l~~li~ 632 (805)
.++ ++++++| +.-|.- . ..+++..+++++..+.+. +++.+++.- ++.+ .+.+.+..+
T Consensus 199 -----~~l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~-----------~~~~~~~l~ 259 (396)
T TIGR03492 199 -----KPL--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS-----------LEKLQAILE 259 (396)
T ss_pred -----ccc--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC-----------HHHHHHHHH
Confidence 022 3344444 444433 2 346788999999999765 678887665 3332 233444444
Q ss_pred hcCCC--------------CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-
Q 003655 633 QYKLN--------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP- 697 (805)
Q Consensus 633 ~~~L~--------------~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~- 697 (805)
+.+.. +++.+.. ...+++.+|+. +|++|..| |.+..|++++|+|+|.....+.
T Consensus 260 ~~g~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~l~~-ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q 327 (396)
T TIGR03492 260 DLGWQLEGSSEDQTSLFQKGTLEVLL------GRGAFAEILHW-ADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQ 327 (396)
T ss_pred hcCceecCCccccchhhccCceEEEe------chHhHHHHHHh-CCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCH
Confidence 44432 1244443 23468888885 99999874 5566999999999999874433
Q ss_pred --cccccc-----CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003655 698 --AEIIVN-----GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 698 --~EiI~d-----g~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll 761 (805)
..+.+. | .+..+...+++.+++.+.+++ .|++.+++|.++++++.......+.+++.+.
T Consensus 328 ~na~~~~~~~~l~g-~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 328 FTYGFAEAQSRLLG-GSVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQERMGPPGASARIAESIL 393 (396)
T ss_pred HHHHHHHhhHhhcC-CEEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 122222 3 344455567888888886554 8999998888655555434444555554443
No 114
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.75 E-value=7.8e-07 Score=97.12 Aligned_cols=115 Identities=17% Similarity=0.191 Sum_probs=78.8
Q ss_pred CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCC
Q 003655 568 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 568 ~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~ 647 (805)
+.+.+++++|..+.. .++++++.+ ++..++++|..... .-.++|++.+.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~~---------------------~~~~ni~~~~~-- 239 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAAD---------------------PRPGNIHVRPF-- 239 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCccc---------------------ccCCCEEEeec--
Confidence 355688999987654 666776664 56889999766310 01578998863
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcH-HHHHHHHcCCcEEEcCcccccc------ccccCceEEEECCC--CHHHH
Q 003655 648 NRVRNGELYRYICDTKGAFVQPALYEAFGL-TVVEAMTCGLPTFATCKGGPAE------IIVNGKSGYHIDPY--HGEQA 718 (805)
Q Consensus 648 ~~v~~~el~~~ia~aaDvfV~PS~~E~fGl-tvlEAMA~GlPVVaT~~GG~~E------iI~dg~~G~l~~p~--d~e~l 718 (805)
...++.++|+. ||++|.-+ |. |+.||+++|+|+++-...+..| .++.-+.|..+++. +++.+
T Consensus 240 ---~~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 240 ---STPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred ---ChHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 33578999995 99999762 44 5999999999999987755444 33344456665533 46776
Q ss_pred HHHH
Q 003655 719 AEIL 722 (805)
Q Consensus 719 A~aI 722 (805)
++.|
T Consensus 311 ~~~l 314 (318)
T PF13528_consen 311 AEFL 314 (318)
T ss_pred HHHH
Confidence 6666
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.73 E-value=1.4e-06 Score=97.90 Aligned_cols=266 Identities=17% Similarity=0.217 Sum_probs=149.9
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~~-~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+|.++... ..+.++++|..+++|+++ +|+-..+. + ..+...+ ...-+-|+...+++..
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~----~----~~eE~~r--------~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTE----G----AIDESIR--------HAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCC----C----CchHHHH--------HHHHHHHhhccCCCHH
Confidence 479999998854 477889999999999764 34321111 0 0111000 1223456777788876
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecC-CccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpn-GVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 561 (805)
..+.+ ...|++ +.++.++.| ++|.-....... .....+.
T Consensus 155 ~~~~L--------------------~~eg~~--~~~i~~tG~~~iD~l~~~~~~~------------------~~~~~~~ 194 (365)
T TIGR03568 155 YRQRV--------------------IQMGED--PDRVFNVGSPGLDNILSLDLLS------------------KEELEEK 194 (365)
T ss_pred HHHHH--------------------HHcCCC--CCcEEEECCcHHHHHHhhhccC------------------HHHHHHH
Confidence 65522 112444 556766644 566432211111 1122345
Q ss_pred hccccCCCCcE-EEEEeecc--CCCCHHHHHHHHHHhHccCCCeEEEEEeC--CCCCCCccHHHHHHHHHHHHHHHhcCC
Q 003655 562 LCVLKDRNKPI-LFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGG--DRRKESKDLEEQAEMKKMYSLIDQYKL 636 (805)
Q Consensus 562 lG~l~~~~k~i-Il~vGRL~--~~Kgi~~LleA~~~l~~~~~~v~LvIVG~--g~~~~~~d~ee~~e~~~l~~li~~~~L 636 (805)
+|+ +.++++ ++.+-+-. .....+.+.+.+..+.+...++ +++.. ++.. ....+.+.++...
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~~-------~~i~~~i~~~~~~--- 260 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAGS-------RIINEAIEEYVNE--- 260 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCCc-------hHHHHHHHHHhcC---
Confidence 676 433334 44554432 3333344444444444433334 44432 2221 0112233333211
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003655 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 716 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e 716 (805)
.++|.+++ .++..++..+++. ++++|.-|. | .+.||.++|+|||+ .|.-.|.++.|.+++++ +.|++
T Consensus 261 ~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~ 327 (365)
T TIGR03568 261 HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDKE 327 (365)
T ss_pred CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCHH
Confidence 46799999 8889999999996 999995432 3 34899999999995 45688888888888888 55889
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003655 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~L 763 (805)
++.+++.++ .+++.++.+ ......|-....++++.++
T Consensus 328 ~I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 328 EIVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 998888653 344433332 1122346666666666553
No 116
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.59 E-value=5e-05 Score=84.61 Aligned_cols=168 Identities=17% Similarity=0.141 Sum_probs=119.6
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCC------------
Q 003655 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN------------ 637 (805)
Q Consensus 570 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~------------ 637 (805)
+++++..+. ...--+.++++++.+++.+|++.+++|=..|+ -.+.++++++..|+.
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE----------Rf~~v~~l~~~~gl~~~~rS~~~~~~~ 298 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE----------RFKAVENLLKRKGLSVTRRSQGDPPFS 298 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh----------hHHHHHHHHHHcCCeEEeecCCCCCCC
Confidence 778877776 22334568899999999999999999988764 356788888888773
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcE-EEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCceEEEECC
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGA-FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDv-fV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~dg~~G~l~~p 712 (805)
+.=.++| -..+||..+|.- +|+ ||--|+.+--|--++|+.++|+|||.- +.....+-+...+.|+.++
T Consensus 299 ~tdV~l~-----DtmGEL~l~y~~-adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~- 371 (419)
T COG1519 299 DTDVLLG-----DTMGELGLLYGI-ADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE- 371 (419)
T ss_pred CCcEEEE-----ecHhHHHHHHhh-ccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC-
Confidence 1123333 246899999994 775 555677666677899999999999994 4444444455556788886
Q ss_pred CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 713 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 713 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
|.+.+++++ +.+.+|++.+++|++++...+.++ ....+++++..
T Consensus 372 -~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~~---~gal~r~l~~l 415 (419)
T COG1519 372 -DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQN---RGALARTLEAL 415 (419)
T ss_pred -CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHHh---hHHHHHHHHHh
Confidence 566666666 455588999999999999988543 22444444443
No 117
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.52 E-value=1.4e-06 Score=83.16 Aligned_cols=123 Identities=22% Similarity=0.207 Sum_probs=77.0
Q ss_pred HHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHHH
Q 003655 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA 395 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~ 395 (805)
.+++.|+++|++|+ ++|..... +......++.+.+++... ...++++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~-----------k~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPR-----------KSPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCC-----------CccHHHHH-HH-HHH
Confidence 66777899999999 98873221 111223467888876431 11344442 21 333
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcC-CcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcC
Q 003655 396 VEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLG-VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 473 (805)
Q Consensus 396 ~~i~~~l~~kPDlIh~h~~~~-~lva~llar~lg-ip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~A 473 (805)
+.+. ..+||+||+|...+ ++++.++++..+ +|++++.|+..... .+. ..+ +.. ...+.+++.|
T Consensus 68 k~ik---~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~~-~~~-------~~~--~~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIK---KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SSK-KKK-------LKK--FIIKFAFKRA 132 (139)
T ss_pred HHhc---cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CCc-hHH-------HHH--HHHHHHHHhC
Confidence 2232 24799999999886 788888999998 99999999864321 110 000 011 1345788999
Q ss_pred CEEEecC
Q 003655 474 DFIITST 480 (805)
Q Consensus 474 D~IIt~S 480 (805)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
No 118
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.45 E-value=1.5e-05 Score=88.74 Aligned_cols=268 Identities=17% Similarity=0.176 Sum_probs=142.3
Q ss_pred CceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003655 405 KPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 405 kPDlIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
+||+|..+.-.. .+.++++|..++||+++.--++....... ...+...+ ..+-+-|+.-+|+|...
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~~-----g~~de~~R--------~~i~~la~lhf~~t~~~ 133 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRTE-----GMPDEINR--------HAIDKLAHLHFAPTEEA 133 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-TTS-----STTHHHHH--------HHHHHH-SEEEESSHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccccCC-----CCchhhhh--------hhhhhhhhhhccCCHHH
Confidence 799999887665 67889999999999655444332211110 01111111 12345789999999887
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCcEEEecC-CccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh-
Q 003655 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH- 561 (805)
Q Consensus 484 ~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpn-GVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~- 561 (805)
.+.+. ..|++ +.++.++-| ++|.- +.......+.
T Consensus 134 ~~~L~--------------------~~G~~--~~rI~~vG~~~~D~l----------------------~~~~~~~~~~~ 169 (346)
T PF02350_consen 134 RERLL--------------------QEGEP--PERIFVVGNPGIDAL----------------------LQNKEEIEEKY 169 (346)
T ss_dssp HHHHH--------------------HTT----GGGEEE---HHHHHH----------------------HHHHHTTCC-H
T ss_pred HHHHH--------------------hcCCC--CCeEEEEChHHHHHH----------------------HHhHHHHhhhh
Confidence 76322 23565 678888765 23321 0000000011
Q ss_pred --hccccCCCCcE-EEEEeeccC---CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcC
Q 003655 562 --LCVLKDRNKPI-LFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 562 --lG~l~~~~k~i-Il~vGRL~~---~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~ 635 (805)
.++..+..+++ +++.=|... ......+.+++..+.+. +++++++.....+ .....+.+..+++
T Consensus 170 ~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p---------~~~~~i~~~l~~~- 238 (346)
T PF02350_consen 170 KNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP---------RGSDIIIEKLKKY- 238 (346)
T ss_dssp HHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H---------HHHHHHHHHHTT--
T ss_pred hhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc---------hHHHHHHHHhccc-
Confidence 12211234444 444434332 23467788888888776 7889999887544 2234445555554
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHH-HHHHcCCcEEEc-CccccccccccCceEEEECCC
Q 003655 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVV-EAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPY 713 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvl-EAMA~GlPVVaT-~~GG~~EiI~dg~~G~l~~p~ 713 (805)
++|+++. .++..+++.+++. +++.|-= .| .+. ||.++|+|||.- +.|--.+-+..+.+-+ +. .
T Consensus 239 --~~v~~~~----~l~~~~~l~ll~~-a~~vvgd-----Ss-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~ 303 (346)
T PF02350_consen 239 --DNVRLIE----PLGYEEYLSLLKN-ADLVVGD-----SS-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-T 303 (346)
T ss_dssp --TTEEEE--------HHHHHHHHHH-ESEEEES-----SH-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-S
T ss_pred --CCEEEEC----CCCHHHHHHHHhc-ceEEEEc-----Cc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-C
Confidence 3899998 7888999999996 8888754 34 688 999999999998 5555567776665555 75 6
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 714 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
|.+++.++|.+++ .+++.+.++.. ....|.=...++++.++.
T Consensus 304 ~~~~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 304 DPEAIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp SHHHHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHHH
T ss_pred CHHHHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHhh
Confidence 8999999997665 55444443321 123455455555555543
No 119
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.32 E-value=0.0001 Score=81.12 Aligned_cols=69 Identities=13% Similarity=0.095 Sum_probs=51.4
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCceEEEE
Q 003655 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE------IIVNGKSGYHI 710 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~E------iI~dg~~G~l~ 710 (805)
.+++.+.+ +.+ .++..+|.. +|++|.-+-+ .++.||+++|+|++.....+..| .+++...|..+
T Consensus 228 ~~~v~~~~----~~~-~~~~~~l~~-ad~vI~~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRR----ITT-DNFKELIKN-AELVITHGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEE----CCh-HHHHHHHHh-CCEEEECCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 46888887 333 578899895 9999987532 47999999999999987765434 34555678888
Q ss_pred CCCCH
Q 003655 711 DPYHG 715 (805)
Q Consensus 711 ~p~d~ 715 (805)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 76665
No 120
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.31 E-value=5.4e-05 Score=81.90 Aligned_cols=97 Identities=14% Similarity=0.251 Sum_probs=69.6
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEE-EEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCC
Q 003655 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNL-VVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 570 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~L-vIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~ 648 (805)
+.+++++|..+..+....+++++.++. +++++ +++|.+.. ..+++++.++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~----------~~~~l~~~~~~~---~~i~~~~~--- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP----------NLDELKKFAKEY---PNIILFID--- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc----------CHHHHHHHHHhC---CCEEEEeC---
Confidence 457899998888775667788887643 33443 35665532 124566666543 47888873
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003655 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK 694 (805)
Q Consensus 649 ~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~ 694 (805)
..++.++|+. +|++|.+ .|.|+.|++++|+|+|+...
T Consensus 232 ---~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ---VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ---HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3478999995 9999984 67999999999999998755
No 121
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.30 E-value=0.00046 Score=80.85 Aligned_cols=140 Identities=14% Similarity=0.032 Sum_probs=90.8
Q ss_pred CcEEEEEeeccCC-----CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEec
Q 003655 570 KPILFTMARLDRV-----KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 570 k~iIl~vGRL~~~-----Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG 644 (805)
.+++++.|..... +-+..+++|++++ + .++++..++... . .++++||.+.+
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~~-----------~--------~~~p~Nv~i~~ 352 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEVE-----------A--------INLPANVLTQK 352 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCcC-----------c--------ccCCCceEEec
Confidence 4788899987532 2345566666554 3 466666654220 0 24568999988
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEECCC--CHHHH
Q 003655 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHIDPY--HGEQA 718 (805)
Q Consensus 645 ~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G----G~~EiI~dg~~G~l~~p~--d~e~l 718 (805)
+++..++..- . .+++||.- |-..++.||+.+|+|+|+.... ..+.-++.-+.|..++.. +.+++
T Consensus 353 ----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l 422 (507)
T PHA03392 353 ----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQL 422 (507)
T ss_pred ----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHH
Confidence 7888777631 1 37788863 3345899999999999996443 345555556678887754 45677
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003655 719 AEILVDFFEKCKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 719 A~aI~~~l~~l~~dp~~~~~ms~~ar~~v 747 (805)
.++|.+.+ +||.++++..+-+....
T Consensus 423 ~~ai~~vl----~~~~y~~~a~~ls~~~~ 447 (507)
T PHA03392 423 VLAIVDVI----ENPKYRKNLKELRHLIR 447 (507)
T ss_pred HHHHHHHh----CCHHHHHHHHHHHHHHH
Confidence 77775554 89988776655554433
No 122
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.27 E-value=2.3e-05 Score=89.61 Aligned_cols=184 Identities=13% Similarity=0.078 Sum_probs=120.2
Q ss_pred hhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCC
Q 003655 557 ENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL 636 (805)
Q Consensus 557 ~~~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L 636 (805)
..|+.+|+ +++..++++..++ .|=-+..++++.++.+.-|+.+|++...... ..+.+++.+.++|+
T Consensus 274 ~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~----------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 274 TTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS----------GEARLRRRFAAHGV 339 (468)
T ss_dssp EETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT----------HHHHHHHHHHHTTS
T ss_pred cCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH----------HHHHHHHHHHHcCC
Confidence 45788999 6777777777766 4556889999999998899999999875432 13567888889999
Q ss_pred C-CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----c-cCceEEE
Q 003655 637 N-GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEII-----V-NGKSGYH 709 (805)
Q Consensus 637 ~-~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI-----~-dg~~G~l 709 (805)
. ++|.|.+ ..+..+-.+.+.. +|+++=|-. -+-|.|.+||+.+|+|||+-.......-+ . -|-..++
T Consensus 340 ~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElI 413 (468)
T PF13844_consen 340 DPDRIIFSP----VAPREEHLRRYQL-ADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELI 413 (468)
T ss_dssp -GGGEEEEE-------HHHHHHHGGG--SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB
T ss_pred ChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhc
Confidence 6 7899998 6666778887775 999998733 34478999999999999985332222211 1 1222333
Q ss_pred ECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Q 003655 710 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK--YTWKIYSQRLLTLTGV 766 (805)
Q Consensus 710 ~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~--ysw~~~a~rll~Ly~~ 766 (805)
.. |.++..+.-.++ ..|++.++++.+.-++...+. |+-..+++.+++.|+.
T Consensus 414 A~--s~~eYv~~Av~L----a~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 414 AD--SEEEYVEIAVRL----ATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp -S--SHHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 33 788887777444 489999999999988776444 8999999999998864
No 123
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.08 E-value=0.00052 Score=75.97 Aligned_cols=276 Identities=16% Similarity=0.157 Sum_probs=143.0
Q ss_pred HHHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHH
Q 003655 315 DEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDV 394 (805)
Q Consensus 315 ~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~ 394 (805)
+.+.++|.++||+|. |.||..... ..+-...|+....+.-.. ...+.-+.....+.
T Consensus 17 k~~I~eL~~~GheV~----it~R~~~~~---------~~LL~~yg~~y~~iG~~g-----------~~~~~Kl~~~~~R~ 72 (335)
T PF04007_consen 17 KNIIRELEKRGHEVL----ITARDKDET---------EELLDLYGIDYIVIGKHG-----------DSLYGKLLESIERQ 72 (335)
T ss_pred HHHHHHHHhCCCEEE----EEEeccchH---------HHHHHHcCCCeEEEcCCC-----------CCHHHHHHHHHHHH
Confidence 478888999999998 888864221 111111122222221111 11111122223333
Q ss_pred HHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCC
Q 003655 395 AVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTD 474 (805)
Q Consensus 395 ~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD 474 (805)
.+......+.+||++++..+ ..+...|..+|+|.|....+-+... ..+..+.-||
T Consensus 73 ~~l~~~~~~~~pDv~is~~s---~~a~~va~~lgiP~I~f~D~e~a~~----------------------~~~Lt~Pla~ 127 (335)
T PF04007_consen 73 YKLLKLIKKFKPDVAISFGS---PEAARVAFGLGIPSIVFNDTEHAIA----------------------QNRLTLPLAD 127 (335)
T ss_pred HHHHHHHHhhCCCEEEecCc---HHHHHHHHHhCCCeEEEecCchhhc----------------------cceeehhcCC
Confidence 32222222358999998755 4566677889999887666421100 0112455789
Q ss_pred EEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEe-cCCccCCC----CCCCcHHHHhhhcCchhhH
Q 003655 475 FIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMSI----YFPYTEEKRRLKSFHPEIE 549 (805)
Q Consensus 475 ~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VI-pnGVD~~~----f~p~~~~~~rl~~~~~~i~ 549 (805)
.|+++.---... +..| ..+-.|. +||++... |.|....
T Consensus 128 ~i~~P~~~~~~~----~~~~---------------------G~~~~i~~y~G~~E~ayl~~F~Pd~~v------------ 170 (335)
T PF04007_consen 128 VIITPEAIPKEF----LKRF---------------------GAKNQIRTYNGYKELAYLHPFKPDPEV------------ 170 (335)
T ss_pred eeECCcccCHHH----HHhc---------------------CCcCCEEEECCeeeEEeecCCCCChhH------------
Confidence 988876311100 0000 1111233 66666533 4444332
Q ss_pred HhhcchhhhhhhhccccCCCCcEEEEEeeccCCCC------HHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHH
Q 003655 550 ELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN------LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAE 623 (805)
Q Consensus 550 ~~l~~~~~~~~~lG~l~~~~k~iIl~vGRL~~~Kg------i~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e 623 (805)
.+.+|+ + +.++|+. |..+.+- -..+-+....+.+. .+. +|++-...+
T Consensus 171 ---------l~~lg~--~-~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~-~~~-vV~ipr~~~----------- 223 (335)
T PF04007_consen 171 ---------LKELGL--D-DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKY-GRN-VVIIPRYED----------- 223 (335)
T ss_pred ---------HHHcCC--C-CCCEEEE--EeccccCeeecCccchHHHHHHHHHhh-Cce-EEEecCCcc-----------
Confidence 245775 4 3455542 5554332 12234555555553 233 666654432
Q ss_pred HHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccc
Q 003655 624 MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---GPAEI 700 (805)
Q Consensus 624 ~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G---G~~Ei 700 (805)
...+.+.++ +..... .+ +...+++- ||++|- +-|....||...|+|+|.+..| +.-+.
T Consensus 224 ---~~~~~~~~~----~~i~~~---~v---d~~~Ll~~-a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~ 284 (335)
T PF04007_consen 224 ---QRELFEKYG----VIIPPE---PV---DGLDLLYY-ADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKY 284 (335)
T ss_pred ---hhhHHhccC----ccccCC---CC---CHHHHHHh-cCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHH
Confidence 112233332 333331 22 33456664 889995 4567789999999999997544 23233
Q ss_pred cccCceEEEECCCCHHHHHHHHHH
Q 003655 701 IVNGKSGYHIDPYHGEQAAEILVD 724 (805)
Q Consensus 701 I~dg~~G~l~~p~d~e~lA~aI~~ 724 (805)
..+ .|+++.-.|++++.+.+.+
T Consensus 285 L~~--~Gll~~~~~~~ei~~~v~~ 306 (335)
T PF04007_consen 285 LIE--KGLLYHSTDPDEIVEYVRK 306 (335)
T ss_pred HHH--CCCeEecCCHHHHHHHHHH
Confidence 322 4778888899998886644
No 124
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.90 E-value=0.00071 Score=77.15 Aligned_cols=156 Identities=17% Similarity=0.142 Sum_probs=102.8
Q ss_pred CCcEEEEEeeccCCCCHHHHHH-HHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCC
Q 003655 569 NKPILFTMARLDRVKNLTGLVE-WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 569 ~k~iIl~vGRL~~~Kgi~~Lle-A~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~ 647 (805)
.+++.++.|..... ..+++ +...+.+ -++++++..++.+. ..-++++++...+
T Consensus 237 ~~~vyvslGt~~~~---~~l~~~~~~a~~~--l~~~vi~~~~~~~~------------------~~~~~p~n~~v~~--- 290 (406)
T COG1819 237 RPIVYVSLGTVGNA---VELLAIVLEALAD--LDVRVIVSLGGARD------------------TLVNVPDNVIVAD--- 290 (406)
T ss_pred CCeEEEEcCCcccH---HHHHHHHHHHHhc--CCcEEEEecccccc------------------ccccCCCceEEec---
Confidence 44556777776544 33333 3333333 25677777755220 1235678899888
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEEC--CCCHHHHHHH
Q 003655 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHID--PYHGEQAAEI 721 (805)
Q Consensus 648 ~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G----G~~EiI~dg~~G~l~~--p~d~e~lA~a 721 (805)
.++..++.. .+|++|+. -|+| ++.||+..|+|+|+-..+ ..++-+++-..|..+. ..+.+.++++
T Consensus 291 -~~p~~~~l~----~ad~vI~h---GG~g-tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~a 361 (406)
T COG1819 291 -YVPQLELLP----RADAVIHH---GGAG-TTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAA 361 (406)
T ss_pred -CCCHHHHhh----hcCEEEec---CCcc-hHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHH
Confidence 777777666 69999987 4455 899999999999996443 3556677777888776 5788999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003655 722 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 722 I~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly 764 (805)
|.+++ +|+..++...+.... ..+.-.-+..++.++++.
T Consensus 362 v~~vL----~~~~~~~~~~~~~~~-~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 362 VNEVL----ADDSYRRAAERLAEE-FKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHh----cCHHHHHHHHHHHHH-hhhcccHHHHHHHHHHHH
Confidence 96665 888876665554443 445555555666666544
No 125
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.89 E-value=0.00044 Score=83.42 Aligned_cols=151 Identities=15% Similarity=0.099 Sum_probs=110.7
Q ss_pred hhhccccCCCCcEEEEEeeccCCCCHHH----HHHHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003655 560 EHLCVLKDRNKPILFTMARLDRVKNLTG----LVEWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 631 (805)
Q Consensus 560 ~~lG~l~~~~k~iIl~vGRL~~~Kgi~~----LleA~~~l~~~~----~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li 631 (805)
+..|+..+++...++++-|+...|...+ .++.+.++++.- ....+++.|...+. |..-+..++.+..++
T Consensus 520 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 596 (797)
T cd04300 520 KTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPG---YYMAKLIIKLINAVA 596 (797)
T ss_pred HHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCC---cHHHHHHHHHHHHHH
Confidence 4457666899999999999999999988 555566665531 12667777766543 445556666666666
Q ss_pred Hh----cCCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003655 632 DQ----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 703 (805)
Q Consensus 632 ~~----~~L~~--~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~d 703 (805)
+. ..+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..-+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 63 23345 788886 3333 445555557999999887 99999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHH
Q 003655 704 --GKSGYHIDPYHGEQAA 719 (805)
Q Consensus 704 --g~~G~l~~p~d~e~lA 719 (805)
++|+|+|.. +.++..
T Consensus 672 vG~eN~fiFG~-~~~ev~ 688 (797)
T cd04300 672 VGEENIFIFGL-TAEEVE 688 (797)
T ss_pred hCcCcEEEeCC-CHHHHH
Confidence 789999954 344433
No 126
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.87 E-value=0.014 Score=67.73 Aligned_cols=144 Identities=13% Similarity=0.102 Sum_probs=79.0
Q ss_pred CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCC
Q 003655 568 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 568 ~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~ 647 (805)
+...+.++.|..... ..+.+-+.+..+.. .+..++++..++. ..+.+.. .+++...+
T Consensus 273 ~~~vvyvsfGs~~~~-~~~~~~~~~~~l~~--~~~~~lw~~~~~~------------~~~~~~~-----~~~~~v~~--- 329 (459)
T PLN02448 273 EGSVLYVSLGSFLSV-SSAQMDEIAAGLRD--SGVRFLWVARGEA------------SRLKEIC-----GDMGLVVP--- 329 (459)
T ss_pred CCceEEEeecccccC-CHHHHHHHHHHHHh--CCCCEEEEEcCch------------hhHhHhc-----cCCEEEec---
Confidence 345677888876431 22333333333333 2457777665421 1111111 24566666
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccC-ceEEEECC-------CCH
Q 003655 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNG-KSGYHIDP-------YHG 715 (805)
Q Consensus 648 ~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G----G~~EiI~dg-~~G~l~~p-------~d~ 715 (805)
+++..++... . +.++||.- -| -.+++||+++|+|+|+-... ..+..+.+. +.|+-+.. -+.
T Consensus 330 -w~pQ~~iL~h-~-~v~~fvtH---gG-~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~ 402 (459)
T PLN02448 330 -WCDQLKVLCH-S-SVGGFWTH---CG-WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGR 402 (459)
T ss_pred -cCCHHHHhcc-C-ccceEEec---Cc-hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcH
Confidence 7788887762 1 13346643 22 34899999999999996443 344455442 45665531 256
Q ss_pred HHHHHHHHHHHHHhhCCH-HHHHHHHHHHHH
Q 003655 716 EQAAEILVDFFEKCKADP-SYWDKISLGGLK 745 (805)
Q Consensus 716 e~lA~aI~~~l~~l~~dp-~~~~~ms~~ar~ 745 (805)
+++++++.+++ .|+ +.-++|.+++.+
T Consensus 403 ~~l~~av~~vl----~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 403 EEIAELVKRFM----DLESEEGKEMRRRAKE 429 (459)
T ss_pred HHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 78888886665 554 333444444443
No 127
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.00014 Score=80.35 Aligned_cols=98 Identities=21% Similarity=0.317 Sum_probs=64.0
Q ss_pred cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccc----cC-ceEEEE-CC--CCHHHHHHHHHHHHHHhhCCH
Q 003655 662 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV----NG-KSGYHI-DP--YHGEQAAEILVDFFEKCKADP 733 (805)
Q Consensus 662 aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~----dg-~~G~l~-~p--~d~e~lA~aI~~~l~~l~~dp 733 (805)
.+++.|+||.||++|.|..|.-.+|.|-|.|+..|..-+++ +. .-|+.+ +- ..+++-.+.+.+++... ...
T Consensus 500 GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F-~~q 578 (692)
T KOG3742|consen 500 GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEF-CKQ 578 (692)
T ss_pred cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHH-HHH
Confidence 69999999999999999999999999999999998755443 32 246544 21 23444445554444322 234
Q ss_pred HHHHHHHHHHH-HHHHHhCCHHHHHHHH
Q 003655 734 SYWDKISLGGL-KRIEEKYTWKIYSQRL 760 (805)
Q Consensus 734 ~~~~~ms~~ar-~~v~e~ysw~~~a~rl 760 (805)
.+|+++.++.+ ++...-.+|+.+..-|
T Consensus 579 sRRQRIiqRNrtErLSdLLDWk~lG~~Y 606 (692)
T KOG3742|consen 579 SRRQRIIQRNRTERLSDLLDWKYLGRYY 606 (692)
T ss_pred HHHHHHHHhcchhhHHHHHhHHHHhHHH
Confidence 55666655444 3444456777655444
No 128
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.76 E-value=0.0031 Score=70.85 Aligned_cols=240 Identities=20% Similarity=0.208 Sum_probs=135.9
Q ss_pred CCceEEEE-cCCCchHHHHHHHHHcCCc--EEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecC
Q 003655 404 GKPDLIIG-NYSDGNIVASLLAHKLGVT--QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 404 ~kPDlIh~-h~~~~~lva~llar~lgip--~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 480 (805)
.+||+++. -+++.|+--+..+++.|++ +++-+- + .-..|+.-. -...-+..|.+.|.=
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~---P-----qvWAWr~~R-----------~~~i~~~~D~ll~if 141 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS---P-----QVWAWRPGR-----------AKKIKKYVDHLLVIF 141 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC---C-----ceeeeCccH-----------HHHHHHHHhheeECC
Confidence 58999885 5555688766777778877 543322 1 111232111 112345788888887
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCC-ccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhh
Q 003655 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 559 (805)
Q Consensus 481 ~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnG-VD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~ 559 (805)
+-+.+- | ..+|+ +...|.|. +|.-...+... ..+
T Consensus 142 PFE~~~-------y-------------~~~g~-----~~~~VGHPl~d~~~~~~~~~--------------------~~~ 176 (373)
T PF02684_consen 142 PFEPEF-------Y-------------KKHGV-----PVTYVGHPLLDEVKPEPDRA--------------------EAR 176 (373)
T ss_pred cccHHH-------H-------------hccCC-----CeEEECCcchhhhccCCCHH--------------------HHH
Confidence 776651 1 11233 34445443 33321111111 112
Q ss_pred hhhccccCCCCcEE-EEEe-eccCC-CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCC
Q 003655 560 EHLCVLKDRNKPIL-FTMA-RLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL 636 (805)
Q Consensus 560 ~~lG~l~~~~k~iI-l~vG-RL~~~-Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L 636 (805)
+.+ + ++++++| +..| |-.+. +.+..+++++..+.+.+|++++++...... ..+.+.+.....+.
T Consensus 177 ~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~----------~~~~i~~~~~~~~~ 243 (373)
T PF02684_consen 177 EKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV----------HEELIEEILAEYPP 243 (373)
T ss_pred Hhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH----------HHHHHHHHHHhhCC
Confidence 233 3 5566654 5555 33343 456888999999999999999998875521 12234455555554
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-Ccccccc----------------
Q 003655 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAE---------------- 699 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT-~~GG~~E---------------- 699 (805)
...+.... ++-+..|+. +|+.+.. .|.+.+|++.+|+|.|+. +.+...-
T Consensus 244 ~~~~~~~~--------~~~~~~m~~-ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~N 309 (373)
T PF02684_consen 244 DVSIVIIE--------GESYDAMAA-ADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPN 309 (373)
T ss_pred CCeEEEcC--------CchHHHHHh-Ccchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechh
Confidence 33444432 356788884 8888865 589999999999999986 3322221
Q ss_pred ccccC--ceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003655 700 IIVNG--KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDK 738 (805)
Q Consensus 700 iI~dg--~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ 738 (805)
++-+. ..-++-+.-+++.+++++.+++ .|++.++.
T Consensus 310 iia~~~v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~~ 346 (373)
T PF02684_consen 310 IIAGREVVPELIQEDATPENIAAELLELL----ENPEKRKK 346 (373)
T ss_pred hhcCCCcchhhhcccCCHHHHHHHHHHHh----cCHHHHHH
Confidence 22111 0112223347788888886555 78775433
No 129
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.65 E-value=0.024 Score=63.11 Aligned_cols=275 Identities=16% Similarity=0.203 Sum_probs=164.5
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+|..|.-.. .+.++++|...+||+++.--++-. .+.+|.. ... -...-.-|+.-++.|..
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-----~~~~~PE---------E~N-R~l~~~~S~~hfapte~ 155 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-----GDLYFPE---------EIN-RRLTSHLSDLHFAPTEI 155 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-----CCCCCcH---------HHH-HHHHHHhhhhhcCChHH
Confidence 5899998887654 567799999999998876665421 1111111 000 01223356667788877
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCc-cCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGV-D~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~ 561 (805)
.++ +....|++ +.++.|+.|-+ |.-.+. ..+.. ........
T Consensus 156 ar~--------------------nLl~EG~~--~~~IfvtGnt~iDal~~~-----~~~~~-----------~~~~~~~~ 197 (383)
T COG0381 156 ARK--------------------NLLREGVP--EKRIFVTGNTVIDALLNT-----RDRVL-----------EDSKILAK 197 (383)
T ss_pred HHH--------------------HHHHcCCC--ccceEEeCChHHHHHHHH-----Hhhhc-----------cchhhHHh
Confidence 665 22334665 66788888853 111000 00000 00000011
Q ss_pred hccccCCC-CcEEEEEeeccCC-CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH-HhcCCCC
Q 003655 562 LCVLKDRN-KPILFTMARLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI-DQYKLNG 638 (805)
Q Consensus 562 lG~l~~~~-k~iIl~vGRL~~~-Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li-~~~~L~~ 638 (805)
+ + .+.+ +.++++.-|-.-. +++..+++++.++.+.++++.++.--... ..+++.. ..++-.+
T Consensus 198 ~-~-~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~-------------~~v~e~~~~~L~~~~ 262 (383)
T COG0381 198 G-L-DDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR-------------PRVRELVLKRLKNVE 262 (383)
T ss_pred h-h-ccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC-------------hhhhHHHHHHhCCCC
Confidence 1 1 1333 4455555565543 89999999999999988776666544321 2233333 4556566
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHH
Q 003655 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~-GG~~EiI~dg~~G~l~~p~d~e~ 717 (805)
+|..+. .+...+...++.. |-+.+.= .|-..=||-..|+||++-+. -.-+|.++.| +-.++. .+.+.
T Consensus 263 ~v~li~----pl~~~~f~~L~~~-a~~iltD-----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~~ 330 (383)
T COG0381 263 RVKLID----PLGYLDFHNLMKN-AFLILTD-----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEEN 330 (383)
T ss_pred cEEEeC----CcchHHHHHHHHh-ceEEEec-----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHHH
Confidence 799997 7888899998886 6333322 35567799999999999643 3556766544 445665 36677
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
+.+++.. +++|++..++|+.. ...|.=...++++.++...|
T Consensus 331 i~~~~~~----ll~~~~~~~~m~~~-----~npYgdg~as~rIv~~l~~~ 371 (383)
T COG0381 331 ILDAATE----LLEDEEFYERMSNA-----KNPYGDGNASERIVEILLNY 371 (383)
T ss_pred HHHHHHH----HhhChHHHHHHhcc-----cCCCcCcchHHHHHHHHHHH
Confidence 7777754 44899888887653 34565555666666665543
No 130
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.63 E-value=0.0011 Score=76.18 Aligned_cols=181 Identities=13% Similarity=0.155 Sum_probs=127.7
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCC-
Q 003655 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN- 637 (805)
Q Consensus 559 ~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~- 637 (805)
|..+|+ +++..++++.++. .|-...+...+.++.+.-|+..|++-|+|++. .....+++++++.|+.
T Consensus 421 R~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~--------~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 421 RAQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDDA--------EINARLRDLAEREGVDS 488 (620)
T ss_pred hhhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCcH--------HHHHHHHHHHHHcCCCh
Confidence 356888 6666666666654 45556666666677777899999999998652 4567899999999995
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCceEEE
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-------CKGGPAEIIV-NGKSGYH 709 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT-------~~GG~~EiI~-dg~~G~l 709 (805)
.+++|.+ +.++++..+.+. -+|+++=+--|-| +.|.+||+-+|+||++- ..|+. ++. -|..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhh
Confidence 6899999 667778788888 4999996644433 46899999999999973 33332 222 2334444
Q ss_pred ECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHH
Q 003655 710 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE--KYTWKIYSQRLLTLTG 765 (805)
Q Consensus 710 ~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e--~ysw~~~a~rll~Ly~ 765 (805)
.+ +.++..++-.. +-.|...+++....-.+.... -|+.+.+++++.++|.
T Consensus 561 A~--s~~dYV~~av~----~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~ 612 (620)
T COG3914 561 AD--SRADYVEKAVA----FGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW 612 (620)
T ss_pred cC--CHHHHHHHHHH----hcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH
Confidence 43 45555554433 347888888877765555433 4899999999999974
No 131
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.56 E-value=0.0045 Score=68.24 Aligned_cols=117 Identities=14% Similarity=0.078 Sum_probs=90.2
Q ss_pred CcEEEecCCCCcCCh-HHHHHHHHccCcEEEeCCC---CCC---CcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003655 638 GQFRWISSQMNRVRN-GELYRYICDTKGAFVQPAL---YEA---FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI 710 (805)
Q Consensus 638 ~~V~flG~~~~~v~~-~el~~~ia~aaDvfV~PS~---~E~---fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~ 710 (805)
+++..+| +... +.+...+.. .++++.-++ -++ +.+-+.|+|+||.|.+++...+..-.+.+|+.=.+.
T Consensus 237 ~~~~yIg----~~~~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~ 311 (373)
T COG4641 237 PNVQYIG----YYNPKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVY 311 (373)
T ss_pred chhhhhh----ccCccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEe
Confidence 4566666 3333 566666664 666665433 233 377899999999999999999998899888765555
Q ss_pred CCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 711 DPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 711 ~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
. |..++.+++..++ ..++.+++|++.|.+++...||.+.-+.++++...
T Consensus 312 ~--d~kdl~~~~~yll----~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 312 Q--DSKDLKEKLKYLL----NHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373)
T ss_pred c--CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Confidence 4 8999999995554 89999999999999999999999988877776544
No 132
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.50 E-value=0.0063 Score=67.50 Aligned_cols=199 Identities=18% Similarity=0.149 Sum_probs=115.2
Q ss_pred CCCceEEEEcCC-CchHHHHHHHHHcC--CcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEec
Q 003655 403 QGKPDLIIGNYS-DGNIVASLLAHKLG--VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITS 479 (805)
Q Consensus 403 ~~kPDlIh~h~~-~~~lva~llar~lg--ip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 479 (805)
..+||++++-.+ +.|+-....-|+.+ +|.|+-+-- +-..|+.-. -....+..|++.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~P--------sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSP--------SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECc--------ceeeechhh-----------HHHHHHHhhHeeee
Confidence 469999997554 45664444445555 776643321 112232221 12356789999998
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEec-CCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhh
Q 003655 480 TFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS-PGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 480 S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIp-nGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~ 558 (805)
=+-+.+-.++ .|+ ..+.|. +=+|.-.+.+... ..
T Consensus 144 lPFE~~~y~k--------------------~g~-----~~~yVGHpl~d~i~~~~~r~--------------------~a 178 (381)
T COG0763 144 LPFEPAFYDK--------------------FGL-----PCTYVGHPLADEIPLLPDRE--------------------AA 178 (381)
T ss_pred cCCCHHHHHh--------------------cCC-----CeEEeCChhhhhccccccHH--------------------HH
Confidence 8776652111 122 133333 3333332333222 23
Q ss_pred hhhhccccCCCCcE-EEEEee-ccC-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHH-hc
Q 003655 559 KEHLCVLKDRNKPI-LFTMAR-LDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLID-QY 634 (805)
Q Consensus 559 ~~~lG~l~~~~k~i-Il~vGR-L~~-~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~-~~ 634 (805)
++.+|+ +.++++ .+..|+ -+. .+....+++++..++.++|+.++++--.... .++...... ..
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~-----------~~~~~~~~~~~~ 245 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK-----------YRRIIEEALKWE 245 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH-----------HHHHHHHHhhcc
Confidence 466887 555544 555663 333 3567788899999998999999999876632 122222222 22
Q ss_pred CCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 635 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 635 ~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
.....+... .++-+..++. ||+.+.. .|.+.+|+|.+|+|.|++
T Consensus 246 ~~~~~~~~~--------~~~~~~a~~~-aD~al~a-----SGT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 246 VAGLSLILI--------DGEKRKAFAA-ADAALAA-----SGTATLEAALAGTPMVVA 289 (381)
T ss_pred ccCceEEec--------CchHHHHHHH-hhHHHHh-----ccHHHHHHHHhCCCEEEE
Confidence 211223333 2466777774 8877754 589999999999999997
No 133
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.43 E-value=0.0019 Score=78.02 Aligned_cols=153 Identities=13% Similarity=0.123 Sum_probs=114.4
Q ss_pred hhhccccCCCCcEEEEEeeccCCCCHHH-HH---HHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003655 560 EHLCVLKDRNKPILFTMARLDRVKNLTG-LV---EWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 631 (805)
Q Consensus 560 ~~lG~l~~~~k~iIl~vGRL~~~Kgi~~-Ll---eA~~~l~~~~----~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li 631 (805)
+..|+..+++...++++-|+...|...+ ++ +.+.++++.- ....+++.|...+. |..-+..++.+.+++
T Consensus 533 ~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIk~I~~va 609 (815)
T PRK14986 533 QQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASA---YYMAKHIIHLINDVA 609 (815)
T ss_pred HHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHHHH
Confidence 3447777889999999999999999988 54 4455555431 23678887776553 455566777777777
Q ss_pred H----hcCCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003655 632 D----QYKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 703 (805)
Q Consensus 632 ~----~~~L~~--~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~d 703 (805)
+ +-.+.+ +|.|+. .... .+.+.+-.++|+-.+.|. .|+.|..-+=||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 7 333445 789986 3333 455555557999999887 99999999999999999999999999999986
Q ss_pred --CceEEEECCCCHHHHHHH
Q 003655 704 --GKSGYHIDPYHGEQAAEI 721 (805)
Q Consensus 704 --g~~G~l~~p~d~e~lA~a 721 (805)
++|||.|.. +.++.++.
T Consensus 685 vG~eN~~~fG~-~~~ev~~~ 703 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEAL 703 (815)
T ss_pred cCCCcEEEeCC-CHHHHHHH
Confidence 889999964 55655443
No 134
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=97.43 E-value=0.0019 Score=77.95 Aligned_cols=151 Identities=17% Similarity=0.102 Sum_probs=108.9
Q ss_pred hhhccccCCCCcEEEEEeeccCCCCHHH-HH---HHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003655 560 EHLCVLKDRNKPILFTMARLDRVKNLTG-LV---EWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 631 (805)
Q Consensus 560 ~~lG~l~~~~k~iIl~vGRL~~~Kgi~~-Ll---eA~~~l~~~~----~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li 631 (805)
++.|+..+++...++.+-|+...|...+ ++ +.+.++++.- ....+++.|...+. |..-+..++.+..++
T Consensus 517 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 593 (794)
T TIGR02093 517 EHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPG---YHMAKLIIKLINSVA 593 (794)
T ss_pred HhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCC---cHHHHHHHHHHHHHH
Confidence 4457766889999999999999999888 44 4555555420 13577777766543 444455566666666
Q ss_pred Hhc----CCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003655 632 DQY----KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 703 (805)
Q Consensus 632 ~~~----~L~~--~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~d 703 (805)
+.. .+.+ +|.|+. .... .+.+.+-.++|+-.+.|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 432 2344 788986 3333 444555557999999877 99999999999999999999999999999987
Q ss_pred --CceEEEECCCCHHHHH
Q 003655 704 --GKSGYHIDPYHGEQAA 719 (805)
Q Consensus 704 --g~~G~l~~p~d~e~lA 719 (805)
++|+|+|.. +.++..
T Consensus 669 vG~eN~fiFG~-~~~ev~ 685 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVE 685 (794)
T ss_pred hCcccEEEcCC-CHHHHH
Confidence 789999954 344443
No 135
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=97.37 E-value=0.0021 Score=77.48 Aligned_cols=145 Identities=10% Similarity=0.021 Sum_probs=106.6
Q ss_pred hhhccccCCCCcEEEEEeeccCCCCHHH-HHH---HHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003655 560 EHLCVLKDRNKPILFTMARLDRVKNLTG-LVE---WYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 631 (805)
Q Consensus 560 ~~lG~l~~~~k~iIl~vGRL~~~Kgi~~-Lle---A~~~l~~~~----~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li 631 (805)
++.|+..+++...++++-|+...|...+ ++. .+.++++.- ....+++.|...+. |..-+..++.+..++
T Consensus 519 ~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~va 595 (798)
T PRK14985 519 QRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG---YYLAKNIIFAINKVA 595 (798)
T ss_pred HHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHHHH
Confidence 3446766888899999999999999888 544 455554430 12678888876553 445555666666666
Q ss_pred HhcC----CCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003655 632 DQYK----LNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 703 (805)
Q Consensus 632 ~~~~----L~~--~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~d 703 (805)
+..+ +.+ +|.|+. .... .+.+.+-.++|+-.+.|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 4442 334 788886 3333 445555557999999887 99999999999999999999999999999976
Q ss_pred --CceEEEECC
Q 003655 704 --GKSGYHIDP 712 (805)
Q Consensus 704 --g~~G~l~~p 712 (805)
++|||.|..
T Consensus 671 vG~eN~f~fG~ 681 (798)
T PRK14985 671 VGEENIFIFGH 681 (798)
T ss_pred hCcCcEEEeCC
Confidence 789999964
No 136
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.33 E-value=0.0047 Score=73.91 Aligned_cols=144 Identities=17% Similarity=0.138 Sum_probs=112.2
Q ss_pred hccccCCCCcEEEEEeeccCCCCHHHHHH----HHHHhH-ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCC
Q 003655 562 LCVLKDRNKPILFTMARLDRVKNLTGLVE----WYGKNA-KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL 636 (805)
Q Consensus 562 lG~l~~~~k~iIl~vGRL~~~Kgi~~Lle----A~~~l~-~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L 636 (805)
.|+..+++...++++-|+...|.....+. .+..++ +..|.+.+++.|...+ .|..-...+..+...++..+.
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP---~y~~aK~iIk~I~~~a~~in~ 555 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP---ADYAAKEIIKLINDVADVINN 555 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC---cchHHHHHHHHHHHHHHhhcc
Confidence 45556788999999999999998877653 444444 3446677777777655 355566777788888888777
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECC
Q 003655 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHIDP 712 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~--dg~~G~l~~p 712 (805)
..+|.|+. ..+. .+.+.+-.++||-.+.|. .|+.|.+-+=||.-|.++|+|-.|...|+.+ ++.|||+|..
T Consensus 556 ~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 556 KLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred cceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 78899996 3333 455555557999999876 8999999999999999999999999999997 8999999964
Q ss_pred C
Q 003655 713 Y 713 (805)
Q Consensus 713 ~ 713 (805)
.
T Consensus 631 ~ 631 (750)
T COG0058 631 T 631 (750)
T ss_pred c
Confidence 3
No 137
>PLN02208 glycosyltransferase family protein
Probab=97.12 E-value=0.76 Score=53.18 Aligned_cols=94 Identities=10% Similarity=0.059 Sum_probs=56.8
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEECC
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~d-g~~G~l~~p 712 (805)
.++.+.+ +++..++..- . +.++||.= -| -++++||+++|+|+|+- +....+..+.+ -+.|..++.
T Consensus 311 ~g~~v~~----W~PQ~~iL~H-~-~v~~FvtH---cG-~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 380 (442)
T PLN02208 311 RGVVWGG----WVQQPLILDH-P-SIGCFVNH---CG-PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSR 380 (442)
T ss_pred CCcEeec----cCCHHHHhcC-C-ccCeEEcc---CC-chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecc
Confidence 3566666 7777777662 1 12355532 22 24899999999999996 33334444443 456777753
Q ss_pred -----CCHHHHHHHHHHHHHHhhCCH-HHHHHHHHHHHH
Q 003655 713 -----YHGEQAAEILVDFFEKCKADP-SYWDKISLGGLK 745 (805)
Q Consensus 713 -----~d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~ar~ 745 (805)
-+.++++++|.+++ .++ +..+++.+++++
T Consensus 381 ~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 381 EKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred ccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 26678888887666 554 334444444443
No 138
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.10 E-value=0.055 Score=63.93 Aligned_cols=196 Identities=17% Similarity=0.137 Sum_probs=108.3
Q ss_pred CCceEEEE-cCCCchHHHHHHHHHcCC--cEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecC
Q 003655 404 GKPDLIIG-NYSDGNIVASLLAHKLGV--TQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 404 ~kPDlIh~-h~~~~~lva~llar~lgi--p~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 480 (805)
.+||++++ .+++.|+-.+..+|+.|+ |+++-+-- +-..|+.-. -+..-+..|.++|.=
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsP--------qVWAWR~~R-----------ikki~k~vD~ll~If 369 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCP--------SIWAWRPKR-----------KTILEKYLDLLLLIL 369 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECc--------cceeeCcch-----------HHHHHHHhhhheecC
Confidence 58999997 555568865666777785 86643321 111232111 112445788888887
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecC-CccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhh
Q 003655 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 559 (805)
Q Consensus 481 ~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpn-GVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~ 559 (805)
+-|.+- |. .+|+ +...|.| =+|.-...+.. .+.+
T Consensus 370 PFE~~~-------------------y~-~~gv-----~v~yVGHPL~d~i~~~~~~--------------------~~~r 404 (608)
T PRK01021 370 PFEQNL-------------------FK-DSPL-----RTVYLGHPLVETISSFSPN--------------------LSWK 404 (608)
T ss_pred ccCHHH-------------------HH-hcCC-----CeEEECCcHHhhcccCCCH--------------------HHHH
Confidence 776651 11 1233 3444433 33432111111 1224
Q ss_pred hhhccccCCCCcEE-EEEe-eccC-CCCHHHHHHHHH--HhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhc
Q 003655 560 EHLCVLKDRNKPIL-FTMA-RLDR-VKNLTGLVEWYG--KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY 634 (805)
Q Consensus 560 ~~lG~l~~~~k~iI-l~vG-RL~~-~Kgi~~LleA~~--~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~ 634 (805)
+++|+ ++++++| +..| |-.+ .+.+..+++++. .+. ++.++++....+ ...+.+.+.++..
T Consensus 405 ~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~~l~fvvp~a~~----------~~~~~i~~~~~~~ 469 (608)
T PRK01021 405 EQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---STHQLLVSSANP----------KYDHLILEVLQQE 469 (608)
T ss_pred HHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---cCeEEEEecCch----------hhHHHHHHHHhhc
Confidence 56777 5555554 5555 3333 356788888887 443 357777643321 1123344444433
Q ss_pred CCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 635 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 635 ~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
+. -.+..+. ..+-+..++ +||+.+.. .|.+.+|++.+|+|.|+.
T Consensus 470 ~~-~~~~ii~-------~~~~~~~m~-aaD~aLaa-----SGTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 470 GC-LHSHIVP-------SQFRYELMR-ECDCALAK-----CGTIVLETALNQTPTIVT 513 (608)
T ss_pred CC-CCeEEec-------CcchHHHHH-hcCeeeec-----CCHHHHHHHHhCCCEEEE
Confidence 21 1234432 012367777 49998876 589999999999999985
No 139
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=96.94 E-value=0.055 Score=64.90 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=95.5
Q ss_pred hhhccccCCCCcEEEEEeeccCCCCHHHH----HHHHHHhHcc----CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003655 560 EHLCVLKDRNKPILFTMARLDRVKNLTGL----VEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 631 (805)
Q Consensus 560 ~~lG~l~~~~k~iIl~vGRL~~~Kgi~~L----leA~~~l~~~----~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li 631 (805)
+..|+..+++...++++-|+...|...+. ++-+.++++. ...+.+++.|...+. |..-+..++.+.+++
T Consensus 434 ~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~---d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 434 KRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPG---DYMGKEIIKLINNVA 510 (713)
T ss_dssp HHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT----HHHHHHHHHHHHHH
T ss_pred HHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCC---cHHHHHHHHHHHHHH
Confidence 34566557888889999999999998883 4566666543 123778888876553 445555666666665
Q ss_pred Hh----cCCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003655 632 DQ----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN 703 (805)
Q Consensus 632 ~~----~~L~~--~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~d 703 (805)
+. ..+.+ +|.|+. ..+. .+.+.+-.++||-.+.|+ .|+.|.+-+=||.-|.+.++|-.|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFle----nYdv-slA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLE----NYDV-SLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEET----T-SH-HHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeec----CCcH-HHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 43 23444 789996 3333 556666667999999886 99999999999999999999999999999864
Q ss_pred --CceEEEECCCCHHH
Q 003655 704 --GKSGYHIDPYHGEQ 717 (805)
Q Consensus 704 --g~~G~l~~p~d~e~ 717 (805)
.+|.|+|.. +.++
T Consensus 586 vG~eN~fiFG~-~~~e 600 (713)
T PF00343_consen 586 VGEENIFIFGL-TAEE 600 (713)
T ss_dssp H-GGGSEEES--BHHH
T ss_pred cCCCcEEEcCC-CHHH
Confidence 457888853 3444
No 140
>PLN02562 UDP-glycosyltransferase
Probab=96.93 E-value=1 Score=52.30 Aligned_cols=88 Identities=17% Similarity=0.189 Sum_probs=58.9
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEEC
Q 003655 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID 711 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~dg-~~G~l~~ 711 (805)
.+++...+ +++..++... . +.++||.- -|+ .+++||+.+|+|+|+. |....+..+.+. +.|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLTH---CGW-NSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEec---Ccc-hhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 35777777 7888888763 1 23456642 333 4899999999999986 444455555442 5677665
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003655 712 PYHGEQAAEILVDFFEKCKADPSYWDK 738 (805)
Q Consensus 712 p~d~e~lA~aI~~~l~~l~~dp~~~~~ 738 (805)
.-+.+++++++.+++ .|++++++
T Consensus 397 ~~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHHh----CCHHHHHH
Confidence 557888888887666 67765543
No 141
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.93 E-value=0.79 Score=52.78 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=60.0
Q ss_pred HHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc
Q 003655 628 YSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVN 703 (805)
Q Consensus 628 ~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~----~GG~~EiI~d 703 (805)
+++.+.+.-..+++.+.. ..+..|+..+++. +|++|..-.. .++=|++.|+|+|+-. .-|..+-+
T Consensus 297 ~~l~~~~~~~~~~~vi~~---~~~~~e~~~iIs~-~dl~ig~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVMD---ELNDLEMGKILGA-CELTVGTRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEecC---CCChHHHHHHHhh-CCEEEEecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 344444443444554431 2345688899996 9999865432 5788999999999953 33333333
Q ss_pred CceEEEECC--CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 003655 704 GKSGYHIDP--YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 746 (805)
Q Consensus 704 g~~G~l~~p--~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~ 746 (805)
|...++++. -+.+++.+.+. ++++|.+.+++--+.+...
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~----~~~~~r~~~~~~l~~~v~~ 406 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVA----DTLGQLPALNARLAEAVSR 406 (426)
T ss_pred CCccEEechhhCCHHHHHHHHH----HHHhCHHHHHHHHHHHHHH
Confidence 223344443 34566777764 4447766555443433333
No 142
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.86 E-value=0.0092 Score=59.78 Aligned_cols=110 Identities=20% Similarity=0.249 Sum_probs=59.4
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEe----cCCCcccCCCChhhh-hhcccccccchhhhHh
Q 003655 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIA----HALEKTKYPDSDIYW-KNLDDKYHFSCQFTAD 466 (805)
Q Consensus 393 ~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~l-gip~v~t~----H~l~~~k~~~s~~~~-~~~~~~y~f~~~~~~e 466 (805)
+++..++++ +..||||++|...|..+ .+...+ ++|++.-+ |+-.. .... |... .......+...+-..-
T Consensus 55 ~a~~~L~~~-Gf~PDvI~~H~GWGe~L--flkdv~P~a~li~Y~E~~y~~~g~-d~~F-Dpe~p~~~~~~~~~r~rN~~~ 129 (171)
T PF12000_consen 55 RAARQLRAQ-GFVPDVIIAHPGWGETL--FLKDVFPDAPLIGYFEFYYRASGA-DVGF-DPEFPPSLDDRARLRMRNAHN 129 (171)
T ss_pred HHHHHHHHc-CCCCCEEEEcCCcchhh--hHHHhCCCCcEEEEEEEEecCCCC-cCCC-CCCCCCCHHHHHHHHHHhHHH
Confidence 344445544 67899999998776322 334444 77776421 11100 0000 0000 0011111112222334
Q ss_pred HHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCC
Q 003655 467 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 531 (805)
Q Consensus 467 ~~a~~~AD~IIt~S~~~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f 531 (805)
..++..+|..|+.|.-.+... | ..+.+|+.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~~f---------------P---------~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRSQF---------------P---------AEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHHhC---------------C---------HHHHcCcEEeecccchhhc
Confidence 567889999999997665421 1 1225799999999999765
No 143
>PLN03007 UDP-glucosyltransferase family protein
Probab=96.71 E-value=1.9 Score=50.49 Aligned_cols=80 Identities=13% Similarity=0.148 Sum_probs=47.4
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc-CceEEEEC
Q 003655 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVN-GKSGYHID 711 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G----G~~EiI~d-g~~G~l~~ 711 (805)
..+++..+ +++..+++.. . +.++||.- -| -++++||+++|+|+|+-... -.+..+.+ -..|+-+.
T Consensus 344 ~~g~~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~ 413 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILDH-Q-ATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVG 413 (482)
T ss_pred cCCEEEec----CCCHHHHhcc-C-ccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEec
Confidence 34677777 7777777662 1 12346653 23 34899999999999996333 33332221 12343321
Q ss_pred ----------CCCHHHHHHHHHHHH
Q 003655 712 ----------PYHGEQAAEILVDFF 726 (805)
Q Consensus 712 ----------p~d~e~lA~aI~~~l 726 (805)
.-+.+++++++.+++
T Consensus 414 ~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 414 AKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred cccccccccCcccHHHHHHHHHHHh
Confidence 126778888886665
No 144
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.69 E-value=0.28 Score=53.42 Aligned_cols=169 Identities=11% Similarity=0.020 Sum_probs=116.3
Q ss_pred CcEEEEEeec-cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCC
Q 003655 570 KPILFTMARL-DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 570 k~iIl~vGRL-~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~ 648 (805)
.++.+-+|+= ++..+...+++++.+... .++++++.=+-|.. ..++++++.+..+++--.+++..+- +
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~g------n~~Yi~~V~~~~~~lF~~~~~~~L~---e 213 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPAN------NQAYIEEVRQAGLALFGAENFQILT---E 213 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCCC------CHHHHHHHHHHHHHhcCcccEEehh---h
Confidence 3555666754 577777778888776643 67888887665421 1267888888888887657888876 5
Q ss_pred cCChHHHHHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003655 649 RVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 649 ~v~~~el~~~ia~aaDvfV~PS-~~E~fGltvlEAMA~GlPVVaT-~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l 726 (805)
.++.+|..++++. +|+.++-- +.+|.| +++=.+..|+||+.+ ++.-..++.+.|.. ++++.++.+ ..+.
T Consensus 214 ~l~f~eYl~lL~~-~Dl~~f~~~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L~---~~~v--- 284 (322)
T PRK02797 214 KLPFDDYLALLRQ-CDLGYFIFARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDLD---EDIV--- 284 (322)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCccc---HHHH---
Confidence 8889999999996 99888764 688999 566689999999997 66666777766654 334433321 1111
Q ss_pred HHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 727 EKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 727 ~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
.+..++|...-++.+. |+-+.+++.|.+++..
T Consensus 285 ------~e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 285 ------REAQRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred ------HHHHHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 0112334455555663 9999999999888764
No 145
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.46 E-value=2.7 Score=49.16 Aligned_cols=118 Identities=14% Similarity=0.144 Sum_probs=66.1
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEECC
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~d-g~~G~l~~p 712 (805)
.+++..+ +++..++..- .+.++||.- -|+ .+++||+++|+|+|+- +..-.+..+.+ -+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTH---CGW-NSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEec---CCc-hHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4577777 7777777652 125677753 333 4899999999999995 33344444433 357776622
Q ss_pred -----CCHHHHHHHHHHHHHHhhCCHHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Q 003655 713 -----YHGEQAAEILVDFFEKCKADPSYWD---KISLGGLKRIEEKYTWKIYSQRLLTLTGVYG 768 (805)
Q Consensus 713 -----~d~e~lA~aI~~~l~~l~~dp~~~~---~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~~ 768 (805)
-+.+++++++.+.+. .+++.++ ++++.+++-+.+.=|-.+..+++.+-+..+|
T Consensus 413 ~~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 413 GADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred CCCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 256788888876652 3444333 2223333333222233344455555444444
No 146
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.31 E-value=3.3 Score=48.51 Aligned_cols=88 Identities=16% Similarity=0.093 Sum_probs=53.3
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccc-cccccCceEEEECC
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPA-EIIVNGKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G----G~~-EiI~dg~~G~l~~p 712 (805)
+++.+.+ +++..++... . +.++||.= -|+ ++++||+.+|+|+|+-... ..+ ..++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G~-nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CGW-NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Ccc-chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4566666 7777777742 1 35556642 333 3899999999999996333 333 33444456766531
Q ss_pred -------------CCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003655 713 -------------YHGEQAAEILVDFFEKCKADPSYWDK 738 (805)
Q Consensus 713 -------------~d~e~lA~aI~~~l~~l~~dp~~~~~ 738 (805)
-+.++++++|.+++. .|++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 256778888866652 25554443
No 147
>PLN02210 UDP-glucosyl transferase
Probab=96.31 E-value=3.2 Score=48.31 Aligned_cols=133 Identities=11% Similarity=0.130 Sum_probs=72.8
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEE-eCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCC
Q 003655 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV-GGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 569 ~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIV-G~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~ 647 (805)
...+.++.|.+... ..+.+-+.+..+... +.+++++ +..... .+ .+.+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~~~--~~------~~~~~~~~~----~~~g~v~~--- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKEKA--QN------VQVLQEMVK----EGQGVVLE--- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCccc--cc------hhhHHhhcc----CCCeEEEe---
Confidence 45678888887532 334444444444442 3355553 322110 00 111222211 13334456
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEECC------CCHH
Q 003655 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHIDP------YHGE 716 (805)
Q Consensus 648 ~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~d-g~~G~l~~p------~d~e 716 (805)
+++..++...- +.++||.- -|++ +++||+++|+|+|+- +..-.+..+.+ -+.|..++. -+.+
T Consensus 331 -w~PQ~~iL~h~--~vg~FitH---~G~n-S~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~ 403 (456)
T PLN02210 331 -WSPQEKILSHM--AISCFVTH---CGWN-STIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVE 403 (456)
T ss_pred -cCCHHHHhcCc--CcCeEEee---CCcc-cHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHH
Confidence 77787776621 12467653 3333 899999999999995 33334445554 467877642 3677
Q ss_pred HHHHHHHHHH
Q 003655 717 QAAEILVDFF 726 (805)
Q Consensus 717 ~lA~aI~~~l 726 (805)
++++++.+++
T Consensus 404 ~l~~av~~~m 413 (456)
T PLN02210 404 EVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHh
Confidence 8888887666
No 148
>PLN00414 glycosyltransferase family protein
Probab=96.08 E-value=4 Score=47.35 Aligned_cols=92 Identities=9% Similarity=0.050 Sum_probs=57.5
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccc-cCceEEEECC--
Q 003655 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIV-NGKSGYHIDP-- 712 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~----~GG~~EiI~-dg~~G~l~~p-- 712 (805)
..+.| +++..++.+. . +.+.||.- +=-++++||+++|+|+|+-. ..-.+..+. .-+.|..+..
T Consensus 314 ~vv~~----w~PQ~~vL~h-~-~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 383 (446)
T PLN00414 314 IVWEG----WVEQPLILSH-P-SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRED 383 (446)
T ss_pred eEEec----cCCHHHHhcC-C-ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecccc
Confidence 45556 7778887762 1 23667753 22358999999999999963 333444553 4467777742
Q ss_pred ---CCHHHHHHHHHHHHHHhhCCH-HHHHHHHHHHHH
Q 003655 713 ---YHGEQAAEILVDFFEKCKADP-SYWDKISLGGLK 745 (805)
Q Consensus 713 ---~d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~ar~ 745 (805)
-+.+++++++.+++ .|+ +..+++.+++++
T Consensus 384 ~~~~~~~~i~~~v~~~m----~~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 384 SGWFSKESLRDTVKSVM----DKDSEIGNLVKRNHKK 416 (446)
T ss_pred CCccCHHHHHHHHHHHh----cCChhhHHHHHHHHHH
Confidence 36778888887666 553 344455555444
No 149
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=95.88 E-value=0.56 Score=57.13 Aligned_cols=154 Identities=13% Similarity=0.180 Sum_probs=110.2
Q ss_pred CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccHH-HHHHHHHHHHHHH-hcCCC--Cc
Q 003655 568 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLE-EQAEMKKMYSLID-QYKLN--GQ 639 (805)
Q Consensus 568 ~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~----~v~LvIVG~g~~~~~~d~e-e~~e~~~l~~li~-~~~L~--~~ 639 (805)
.++.+|+.+-|++..||+..=+.++.++...+| .+.++.+..+...+..+.+ ...+.......+. +.+-. ..
T Consensus 274 ~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~p 353 (732)
T KOG1050|consen 274 KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQP 353 (732)
T ss_pred cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccce
Confidence 477899999999999999988888888776654 5777777766552222111 1122222222222 22211 23
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCccccccccccCceEEEECCCCH
Q 003655 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVNGKSGYHIDPYHG 715 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~G----lPVVaT~~GG~~EiI~dg~~G~l~~p~d~ 715 (805)
|+++- ..++..++.++++ .+|++...++-+|..++.+|+.+|. .+.|.+..-|..+..+++ ..+++|.|.
T Consensus 354 V~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~--aivvnpw~~ 427 (732)
T KOG1050|consen 354 VHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA--AIVVNPWDG 427 (732)
T ss_pred EEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceEEeeecccccccccc--CEEECCcch
Confidence 44332 3677889999999 4999999999999999999999985 678888888888887554 578899999
Q ss_pred HHHHHHHHHHHH
Q 003655 716 EQAAEILVDFFE 727 (805)
Q Consensus 716 e~lA~aI~~~l~ 727 (805)
++++..|..++.
T Consensus 428 ~~~~~~i~~al~ 439 (732)
T KOG1050|consen 428 DEFAILISKALT 439 (732)
T ss_pred HHHHHHHHHHhh
Confidence 999999977763
No 150
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.84 E-value=0.14 Score=57.15 Aligned_cols=90 Identities=16% Similarity=0.071 Sum_probs=56.3
Q ss_pred cEEEEEeecc-C-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCC
Q 003655 571 PILFTMARLD-R-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 571 ~iIl~vGRL~-~-~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~ 648 (805)
.+.+..|+-. . .+.+..+++++.++.+.. ..+++.|.... +.+++...+. ..+.+.+
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~~~------------~~i~~~~~~~---~~~~~~~---- 227 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFFKG------------KDLKEIYGDI---SEFEISY---- 227 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCCcH------------HHHHHHHhcC---CCcEEec----
Confidence 3445555432 2 355677779998887643 66777765421 2333333322 2344543
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 649 ~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
+.+.+++. +|+.+.. .|.+.+|++.+|+|.|..
T Consensus 228 -----~~~~~m~~-aDlal~~-----SGT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 -----DTHKALLE-AEFAFIC-----SGTATLEAALIGTPFVLA 260 (347)
T ss_pred -----cHHHHHHh-hhHHHhc-----CcHHHHHHHHhCCCEEEE
Confidence 34677774 9988865 588888999999999985
No 151
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.80 E-value=0.78 Score=50.59 Aligned_cols=110 Identities=14% Similarity=0.077 Sum_probs=67.0
Q ss_pred CCCcEEEEEeeccCCC--CHH---HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 568 RNKPILFTMARLDRVK--NLT---GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 568 ~~k~iIl~vGRL~~~K--gi~---~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
+.+.+.+.+|.=++.- +.+ .+++.+..+.+..+ ..+.|..+-... .+..+.+.+..+ -.+.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp-------~~~~~~L~~~~~---~~~~~~~ 213 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP-------PEAEAALRELLK---DNPGVYI 213 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc-------HHHHHHHHHhhc---CCCceEE
Confidence 4455667788643322 223 56666666666554 788888876542 122333443333 3456733
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG 696 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG 696 (805)
.. .-...-+..+++. +|.++++.. .-.-+.||.++|+||..-...+
T Consensus 214 ~~----~~~~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 214 WD----GTGENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred ec----CCCCCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 33 1222346677774 999999844 3345789999999999987776
No 152
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.79 E-value=0.67 Score=50.34 Aligned_cols=56 Identities=18% Similarity=0.178 Sum_probs=37.0
Q ss_pred CcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHHHH
Q 003655 663 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHGEQAAEILVDF 725 (805)
Q Consensus 663 aDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G---G~~EiI~dg~~G~l~~p~d~e~lA~aI~~~ 725 (805)
|++.+ -+-|.---||...|+|.|++.-| +.-+... +.|.++..+|+.+..+...+.
T Consensus 253 a~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~ 311 (346)
T COG1817 253 ATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRN 311 (346)
T ss_pred hheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHH
Confidence 55555 34566678999999999998744 2333332 368888888887655555443
No 153
>PLN02173 UDP-glucosyl transferase family protein
Probab=95.76 E-value=5.4 Score=46.30 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=52.6
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEEC
Q 003655 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID 711 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~dg-~~G~l~~ 711 (805)
.+++.+.+ +++..++...= +.++||.- +=.++++||+++|+|+|+- +..-.+..+.+. +.|+-+.
T Consensus 316 ~~~~~i~~----W~PQ~~iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~ 385 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK 385 (449)
T ss_pred CCceEEeC----CCCHHHHhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe
Confidence 35678777 78877777621 13466643 2245899999999999996 444445555553 4666653
Q ss_pred CC------CHHHHHHHHHHHH
Q 003655 712 PY------HGEQAAEILVDFF 726 (805)
Q Consensus 712 p~------d~e~lA~aI~~~l 726 (805)
.. +.+++++++.+++
T Consensus 386 ~~~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 386 AEKESGIAKREEIEFSIKEVM 406 (449)
T ss_pred ecccCCcccHHHHHHHHHHHh
Confidence 21 5688888887766
No 154
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.52 E-value=0.072 Score=47.08 Aligned_cols=71 Identities=17% Similarity=0.135 Sum_probs=48.7
Q ss_pred ccCeEEEEeccccCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEE
Q 003655 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQCTI 434 (805)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~--~lva~llar~lgip~v~t 434 (805)
+++.++..+|+... ......|.+.....-....+.+ ++.||||+|.... ..-+.+.|+.+|++.|+|
T Consensus 13 tngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ilir---E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILIR---ERIDIVHGHQAFSTLCHEAILHARTMGLKTVFT 81 (90)
T ss_pred CCCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHHH---cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEee
Confidence 34788999998652 2233444443333333333333 4899999999876 457888899999999999
Q ss_pred ecCC
Q 003655 435 AHAL 438 (805)
Q Consensus 435 ~H~l 438 (805)
-|++
T Consensus 82 DHSL 85 (90)
T PF08288_consen 82 DHSL 85 (90)
T ss_pred cccc
Confidence 9986
No 155
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=95.27 E-value=3 Score=46.17 Aligned_cols=133 Identities=19% Similarity=0.174 Sum_probs=75.1
Q ss_pred CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeE---EEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEec
Q 003655 568 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVN---LVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 568 ~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~---LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG 644 (805)
....+++++|.= .-|-+ |++++......-++++ ++|.|..... +...++.....-.++|..+-
T Consensus 218 E~~~Ilvs~GGG--~dG~e-Li~~~l~A~~~l~~l~~~~~ivtGP~MP~-----------~~r~~l~~~A~~~p~i~I~~ 283 (400)
T COG4671 218 EGFDILVSVGGG--ADGAE-LIETALAAAQLLAGLNHKWLIVTGPFMPE-----------AQRQKLLASAPKRPHISIFE 283 (400)
T ss_pred ccceEEEecCCC--hhhHH-HHHHHHHHhhhCCCCCcceEEEeCCCCCH-----------HHHHHHHHhcccCCCeEEEE
Confidence 345678888752 23433 3333333332223333 5666665442 33344444444457888876
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc--ccc------cCceEEEECCC--C
Q 003655 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE--IIV------NGKSGYHIDPY--H 714 (805)
Q Consensus 645 ~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~E--iI~------dg~~G~l~~p~--d 714 (805)
+. .++..+++. |+..|.=+-| +|+.|-++.|||.+.-..+.+.| .+. =|-..++ .|. +
T Consensus 284 f~------~~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL-~pe~lt 351 (400)
T COG4671 284 FR------NDFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL-LPENLT 351 (400)
T ss_pred hh------hhHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee-CcccCC
Confidence 43 367888885 8888865332 58999999999999876655544 221 1223333 344 3
Q ss_pred HHHHHHHHHHHH
Q 003655 715 GEQAAEILVDFF 726 (805)
Q Consensus 715 ~e~lA~aI~~~l 726 (805)
++.+|++|...+
T Consensus 352 ~~~La~al~~~l 363 (400)
T COG4671 352 PQNLADALKAAL 363 (400)
T ss_pred hHHHHHHHHhcc
Confidence 666777774433
No 156
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=94.96 E-value=1.4 Score=48.67 Aligned_cols=122 Identities=11% Similarity=0.064 Sum_probs=87.0
Q ss_pred CcEEEEEee-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCC
Q 003655 570 KPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 570 k~iIl~vGR-L~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~ 648 (805)
++.-+-+|+ =++..|.-.+++++.+.. ..++++++-=+-+.. ..++++++.+.++++--.+++..+- +
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~------n~~Yi~~V~~~~~~lF~~~~~~iL~---e 252 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGAN------NQAYIQQVIQAGKELFGAENFQILT---E 252 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCc------hHHHHHHHHHHHHHhcCccceeEhh---h
Confidence 445555665 467777777777776533 356787765444321 1267888888888876566787764 4
Q ss_pred cCChHHHHHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCcccc-ccccccC
Q 003655 649 RVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIVNG 704 (805)
Q Consensus 649 ~v~~~el~~~ia~aaDvfV~PS-~~E~fGltvlEAMA~GlPVVaT~~GG~-~EiI~dg 704 (805)
.++.+|..++++. +|+.++.. +..|.| +++=.+.+|+||+.+...-. .+..+.+
T Consensus 253 ~mpf~eYl~lL~~-cDl~if~~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~~ 308 (360)
T PF07429_consen 253 FMPFDEYLALLSR-CDLGIFNHNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQG 308 (360)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhhHh-HHHHHHHcCCeEEEecCChHHHHHHhCC
Confidence 8889999999996 99999986 488899 56779999999999855544 5555444
No 157
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=94.91 E-value=2.2 Score=45.65 Aligned_cols=145 Identities=17% Similarity=0.096 Sum_probs=80.8
Q ss_pred CCCCcEE---EEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHH----------HHHh
Q 003655 567 DRNKPIL---FTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYS----------LIDQ 633 (805)
Q Consensus 567 ~~~k~iI---l~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~----------li~~ 633 (805)
+..+... .|+||....||+..+++.-++..+. ++..-++-|-.... +.+.-... .+.+
T Consensus 177 d~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~--------A~~~i~d~~~~~~y~~~~~~~~ 247 (355)
T PF11440_consen 177 DVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP--------AKISIKDHGIPYEYYPKLDCDE 247 (355)
T ss_dssp -GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST--------HHHHHHHTT--EEEE-CTGGGG
T ss_pred hhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC--------ceeeeecCCcccccCccccccC
Confidence 3344444 7999999999999999988886554 56777777743210 11111000 0001
Q ss_pred cCC--CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC------CCCCcHHHHHHHHcCC-cEEEcCccccccc----
Q 003655 634 YKL--NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGL-PTFATCKGGPAEI---- 700 (805)
Q Consensus 634 ~~L--~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~------~E~fGltvlEAMA~Gl-PVVaT~~GG~~Ei---- 700 (805)
..+ ..-+..+| +.-++|....|+. +...++-+. .+..-.+-+|..|||+ ||+-+..|...-+
T Consensus 248 ~~~~pN~~~~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~ 322 (355)
T PF11440_consen 248 PKPAPNSPVPVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDG 322 (355)
T ss_dssp ---SSS--EEEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTS
T ss_pred cccCCCCcceecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecC
Confidence 111 12366676 6778899999996 655555442 4557789999999997 8888877765542
Q ss_pred ---cccCceEEEECCCCHHHHHHHHHHH
Q 003655 701 ---IVNGKSGYHIDPYHGEQAAEILVDF 725 (805)
Q Consensus 701 ---I~dg~~G~l~~p~d~e~lA~aI~~~ 725 (805)
+.+.-+.+.++.+|.++..++|.++
T Consensus 323 ~~~~~~~~~~I~~De~dle~T~ekl~E~ 350 (355)
T PF11440_consen 323 TRYIDHPYSAIYFDENDLESTVEKLIEV 350 (355)
T ss_dssp SBGGSS--S-EEE-TTSHHHHHHHHHHH
T ss_pred ceeeccCcceeEeccchHHHHHHHHHHH
Confidence 2233356778989999998888654
No 158
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.22 E-value=1.1 Score=50.14 Aligned_cols=238 Identities=13% Similarity=0.139 Sum_probs=102.8
Q ss_pred ceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHh
Q 003655 406 PDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIA 485 (805)
Q Consensus 406 PDlIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 485 (805)
..+++++.....+. ....+.+..+|.+.||. +.|.- .+...... .... .-.......|.++++|+.+..
T Consensus 79 Ak~~i~~~~~~~~~--~~~~~~~~~~i~lwHG~-~~K~~----g~~~~~~~-~~~~---~~~~~~~~~d~~~~~s~~~~~ 147 (369)
T PF04464_consen 79 AKYIISDSYFPDLI--YFKKRKNQKYIQLWHGI-PLKKI----GYDSPDNK-NYRK---NYKRNYRNYDYFIVSSEFEKE 147 (369)
T ss_dssp EEEEEESS---T----TS---TTSEEEE--SS---SB------GGG-S----TS-H---HHHHHHTT-SEEEESSHHHHH
T ss_pred CcEEEECCCCCccc--ccccCCCcEEEEecCCC-ccccc----chhccccc-cchh---hhhhhccCCcEEEECCHHHHH
Confidence 56788774333222 22345678999999997 33311 11000000 0000 112356789999999988766
Q ss_pred hccccccccccccccccccceeeeccCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccc
Q 003655 486 GSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVL 565 (805)
Q Consensus 486 ~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGVD~~~f~p~~~~~~rl~~~~~~i~~~l~~~~~~~~~lG~l 565 (805)
-..+.++ ++ ..++ +..|. |..+.--.... . .....++.+|+
T Consensus 148 ~~~~~f~-------------------~~--~~~i--~~~G~------PR~D~l~~~~~--~-------~~~~i~~~~~~- 188 (369)
T PF04464_consen 148 IFKKAFG-------------------YP--EDKI--LVTGY------PRNDYLFNKSK--E-------NRNRIKKKLGI- 188 (369)
T ss_dssp HHHHHTT-----------------------GGGE--EES--------GGGHHHHHSTT----------HHHHHHHHTT--
T ss_pred HHHHHhc-------------------cC--cceE--EEeCC------CeEhHHhccCH--H-------HHHHHHHHhcc-
Confidence 4333322 22 2233 33443 22211000000 0 01122345676
Q ss_pred cCCCCcEEEEEeeccCCCCH------HHH--HHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHh-cCC
Q 003655 566 KDRNKPILFTMARLDRVKNL------TGL--VEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-YKL 636 (805)
Q Consensus 566 ~~~~k~iIl~vGRL~~~Kgi------~~L--leA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~-~~L 636 (805)
+.++.+|+|+-........ ... .+.+.. ...+++.+++-.-.. +...... ...
T Consensus 189 -~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp~---------------~~~~~~~~~~~ 250 (369)
T PF04464_consen 189 -DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHPN---------------MKKKFKDFKED 250 (369)
T ss_dssp --SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SHH---------------HHTT----TT-
T ss_pred -CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCch---------------hhhchhhhhcc
Confidence 6778899999655332221 111 222222 223677777665321 1111111 344
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc--Cc-------cccccccccCceE
Q 003655 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT--CK-------GGPAEIIVNGKSG 707 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT--~~-------GG~~EiI~dg~~G 707 (805)
.++|.++. +..+++.++.. +|++|.= ++-++.|++.+++|||-- +. |...+ ..+...|
T Consensus 251 ~~~i~~~~------~~~~~~~ll~~-aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg 317 (369)
T PF04464_consen 251 NSNIIFVS------DNEDIYDLLAA-ADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPG 317 (369)
T ss_dssp TTTEEE-T------T-S-HHHHHHT--SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS
T ss_pred CCcEEECC------CCCCHHHHHHh-cCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCC
Confidence 57888875 22378888885 9999953 566899999999999963 22 22333 2233346
Q ss_pred EEECCCCHHHHHHHHHHHH
Q 003655 708 YHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 708 ~l~~p~d~e~lA~aI~~~l 726 (805)
-.+. +.+++.++|.+.+
T Consensus 318 ~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 318 PIVY--NFEELIEAIENII 334 (369)
T ss_dssp -EES--SHHHHHHHHTTHH
T ss_pred ceeC--CHHHHHHHHHhhh
Confidence 5664 7899999996655
No 159
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.11 E-value=1.7 Score=46.72 Aligned_cols=140 Identities=19% Similarity=0.271 Sum_probs=80.1
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCC
Q 003655 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 569 ~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~ 648 (805)
.+-+++++|.=++ ||++. +.++.+.. .++++.||-+... .....+++.++. .+++.++-
T Consensus 158 ~r~ilI~lGGsDp-k~lt~--kvl~~L~~--~~~nl~iV~gs~~---------p~l~~l~k~~~~---~~~i~~~~---- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLTL--KVLAELEQ--KNVNLHIVVGSSN---------PTLKNLRKRAEK---YPNINLYI---- 216 (318)
T ss_pred hheEEEEccCCCh-hhhHH--HHHHHhhc--cCeeEEEEecCCC---------cchhHHHHHHhh---CCCeeeEe----
Confidence 3447888886554 66544 34444443 2366655544222 123445555554 46788764
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEE----cCcccccccccc----CceEEEECCCCHHHHHH
Q 003655 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA----TCKGGPAEIIVN----GKSGYHIDPYHGEQAAE 720 (805)
Q Consensus 649 ~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVa----T~~GG~~EiI~d----g~~G~l~~p~d~e~lA~ 720 (805)
...+|.++|.+ +|..+.. -|.|+.||...|+|.++ .+.-..+.-.+. ...|++. .......
T Consensus 217 --~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~~ 285 (318)
T COG3980 217 --DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKDY 285 (318)
T ss_pred --cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHHH
Confidence 34579999997 8877754 48899999999999333 232222222211 1245553 2344444
Q ss_pred HHHHHHHHhhCCHHHHHHHHHHHH
Q 003655 721 ILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 721 aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
.+.+ +-.|+..++.++..++
T Consensus 286 ~~~~----i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 286 EILQ----IQKDYARRKNLSFGSK 305 (318)
T ss_pred HHHH----hhhCHHHhhhhhhccc
Confidence 4533 3488888887776554
No 160
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=93.25 E-value=21 Score=41.85 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=51.0
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----cccccccc-ccCceEEEECC-
Q 003655 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VNGKSGYHIDP- 712 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~----~GG~~EiI-~dg~~G~l~~p- 712 (805)
++.+.+ +++..++...-+ .+.||.- +=-++++||+.+|+|+|+-. ....+..+ +.-+.|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 477777 777777776311 2346642 22348999999999999963 33344455 34456777643
Q ss_pred ---CCHHHHHHHHHHHH
Q 003655 713 ---YHGEQAAEILVDFF 726 (805)
Q Consensus 713 ---~d~e~lA~aI~~~l 726 (805)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 36778888887766
No 161
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=93.23 E-value=6.8 Score=41.84 Aligned_cols=112 Identities=9% Similarity=0.035 Sum_probs=65.0
Q ss_pred CCCCcEEEEEeeccCCCCH-----HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHh-cCCCCcE
Q 003655 567 DRNKPILFTMARLDRVKNL-----TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-YKLNGQF 640 (805)
Q Consensus 567 ~~~k~iIl~vGRL~~~Kgi-----~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~-~~L~~~V 640 (805)
.+...+-+.+|.=.+.-.. ..++.++-+..+. ....+++--+-... +..+.+++. +.-..-+
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRTp-----------~~~~s~l~~~l~s~~~i 226 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRTP-----------DTVKSILKNNLNSSPGI 226 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCCc-----------HHHHHHHHhccccCcee
Confidence 3455677788865544333 2233333332221 34667776655332 345555554 4444557
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003655 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 697 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~ 697 (805)
.|-+.-++.- -...+++ ++|.++.++.. =.-..||.+.|+||++-.-.+.
T Consensus 227 ~w~~~d~g~N---PY~~~La-~Adyii~TaDS---inM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 227 VWNNEDTGYN---PYIDMLA-AADYIISTADS---INMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred EeCCCCCCCC---chHHHHh-hcceEEEecch---hhhhHHHhccCCCeEEEecCCc
Confidence 7776433332 3456666 59999998652 2236899999999998654443
No 162
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=92.92 E-value=0.31 Score=56.90 Aligned_cols=137 Identities=10% Similarity=0.077 Sum_probs=76.6
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCC
Q 003655 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 569 ~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~ 648 (805)
+..++++.|.+.. ...+..++.+.+.-+..|. ++++.-++... . .+++++....
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~~-----------~---------~l~~n~~~~~---- 329 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGEPP-----------E---------NLPKNVLIVK---- 329 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCSHG-----------C---------HHHTTEEEES----
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-ccccccccccc-----------c---------cccceEEEec----
Confidence 4457888888753 2333333333333333355 67776665321 0 1235787776
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCceEEEECCC--CHHHHHHHH
Q 003655 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDPY--HGEQAAEIL 722 (805)
Q Consensus 649 ~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~dg~~G~l~~p~--d~e~lA~aI 722 (805)
++|..++... . ..++||.= |--.++.||+.+|+|+|+- |....+..+++.+.|..++.. +.+++.++|
T Consensus 330 W~PQ~~lL~h-p-~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 403 (500)
T PF00201_consen 330 WLPQNDLLAH-P-RVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAI 403 (500)
T ss_dssp S--HHHHHTS-T-TEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHH
T ss_pred cccchhhhhc-c-cceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHH
Confidence 7888777641 1 23566642 3345899999999999996 334455566666678888755 456777777
Q ss_pred HHHHHHhhCCHHHHHHHHH
Q 003655 723 VDFFEKCKADPSYWDKISL 741 (805)
Q Consensus 723 ~~~l~~l~~dp~~~~~ms~ 741 (805)
.+.+ +|+.++++..+
T Consensus 404 ~~vl----~~~~y~~~a~~ 418 (500)
T PF00201_consen 404 REVL----ENPSYKENAKR 418 (500)
T ss_dssp HHHH----HSHHHHHHHHH
T ss_pred HHHH----hhhHHHHHHHH
Confidence 5554 89877655444
No 163
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=92.06 E-value=14 Score=39.57 Aligned_cols=102 Identities=19% Similarity=0.240 Sum_probs=61.2
Q ss_pred CCCCcEEEEEeeccCC-------CCHHHHHHHHHHhHccCCCeEEEEEeCCCC-CCCccHHHHHHHHHHHHHHHhc-CCC
Q 003655 567 DRNKPILFTMARLDRV-------KNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQY-KLN 637 (805)
Q Consensus 567 ~~~k~iIl~vGRL~~~-------Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~-~~~~d~ee~~e~~~l~~li~~~-~L~ 637 (805)
..+++.|++....... .+...+.+.+..+.+..|+++++|-= .|. ....+ .....+. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~----------~~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNK----------YSYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCC----------hhHhhhhhcC-
Confidence 5678889999887653 24455667777666666788876654 332 11100 0222222 33
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
.++.++. +...++.++.. +|..+.- .+.+-+||+.+|+||++.
T Consensus 182 ~~~~~~~------~~~~~~~Ll~~-s~~Vvti-----nStvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 182 PNVVIID------DDVNLYELLEQ-SDAVVTI-----NSTVGLEALLHGKPVIVF 224 (269)
T ss_pred CCeEEEC------CCCCHHHHHHh-CCEEEEE-----CCHHHHHHHHcCCceEEe
Confidence 3455543 12346777775 6655543 245889999999999995
No 164
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=91.63 E-value=0.1 Score=51.51 Aligned_cols=91 Identities=16% Similarity=0.195 Sum_probs=55.8
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEE
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYH 709 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG--------~~EiI~dg~~G~l 709 (805)
.+|.+.++.. ++..+|+. +|+.|.- +-+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6789988433 37888885 9998874 23579999999999998865555 2222333333444
Q ss_pred ECCC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 003655 710 IDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGG 743 (805)
Q Consensus 710 ~~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 743 (805)
+... +++.+.++| ..+..++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i----~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAI----EELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHH----HCHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHH----HHHHcCcHHHHHHHHHH
Confidence 3322 356677777 55558888777776654
No 165
>PLN02670 transferase, transferring glycosyl groups
Probab=90.05 E-value=11 Score=44.16 Aligned_cols=111 Identities=15% Similarity=0.124 Sum_probs=65.4
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCceEEEECC---
Q 003655 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDP--- 712 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~dg~~G~l~~p--- 712 (805)
+.+.+ +++..++... . +.+.||.- -| -++++||+++|+|+|+- +....+..+++-+.|..++.
T Consensus 341 ~vv~~----W~PQ~~IL~H-~-~v~~FvtH---cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~ 410 (472)
T PLN02670 341 MIHVG----WVPQVKILSH-E-SVGGFLTH---CG-WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDER 410 (472)
T ss_pred eEEeC----cCCHHHHhcC-c-ccceeeec---CC-cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeecccc
Confidence 55556 7777777752 1 23346642 22 34899999999999996 44444555555678887753
Q ss_pred ---CCHHHHHHHHHHHHHHhhCCH---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003655 713 ---YHGEQAAEILVDFFEKCKADP---SYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 713 ---~d~e~lA~aI~~~l~~l~~dp---~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~ 765 (805)
-+.++++++|.+++ .|+ +++++. +.-++.+.+.=+-..+++.+++...
T Consensus 411 ~~~~~~e~i~~av~~vm----~~~~g~~~r~~a-~~l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 411 DGSFTSDSVAESVRLAM----VDDAGEEIRDKA-KEMRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred CCcCcHHHHHHHHHHHh----cCcchHHHHHHH-HHHHHHHhCcchhHHHHHHHHHHHH
Confidence 24778888886665 554 233222 2222233344455556666555443
No 166
>PLN02167 UDP-glycosyltransferase family protein
Probab=88.60 E-value=5.6 Score=46.55 Aligned_cols=79 Identities=14% Similarity=0.115 Sum_probs=49.8
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----cccccc-ccccCceEEEECC
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAE-IIVNGKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~----~GG~~E-iI~dg~~G~l~~p 712 (805)
++....+ +++..++...= +.+.||.- -|++ +++||+++|+|+|+-. ..-.+. +++.-+.|+.+..
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH---~G~n-S~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSH---CGWN-SVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEee---CCcc-cHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3445556 77787877622 24567753 3343 8999999999999953 333332 2444456776642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 003655 713 ---------YHGEQAAEILVDFF 726 (805)
Q Consensus 713 ---------~d~e~lA~aI~~~l 726 (805)
-+.+++++++.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 25678888886665
No 167
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=88.50 E-value=8.1 Score=44.93 Aligned_cols=92 Identities=11% Similarity=0.165 Sum_probs=58.5
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEEC-
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID- 711 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~dg-~~G~l~~- 711 (805)
++....+ +++..++... . +.+.||.- -|++ +++||+++|+|+|+- +....+..+.+. +.|+-+.
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G~n-S~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSH---CGWN-STLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeec---Cchh-HHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5666666 8888887763 1 24457753 3333 899999999999995 444445555443 5777663
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003655 712 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 712 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
.-+.+++++++.+++ .|++ .+++.++++
T Consensus 394 ~~~~~~v~~av~~lm----~~~~-~~~~r~~a~ 421 (451)
T PLN02410 394 DLDRGAVERAVKRLM----VEEE-GEEMRKRAI 421 (451)
T ss_pred cccHHHHHHHHHHHH----cCCc-HHHHHHHHH
Confidence 336788888887666 5654 334444443
No 168
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.12 E-value=3 Score=44.77 Aligned_cols=98 Identities=13% Similarity=0.087 Sum_probs=62.9
Q ss_pred EEEEEeeccCCC--CHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCc
Q 003655 572 ILFTMARLDRVK--NLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 572 iIl~vGRL~~~K--gi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~ 649 (805)
+++..|.-.+.| ..+.+.+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.| .
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e-----------~~~~~~i~~~~~~~~~~~~~~----~ 186 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE-----------RELAEEIAAALGGPRVVNLAG----K 186 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh-----------HHHHHHHHHhcCCCccccCcC----C
Confidence 344444434444 346777777777764 688999987632 233344444443223345566 5
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 650 v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
.+..|+..+++. +|++|.+- + |. +-=|.+.|+|+|+-
T Consensus 187 ~~l~e~~~li~~-~~l~I~~D---s-g~-~HlA~a~~~p~i~l 223 (279)
T cd03789 187 TSLRELAALLAR-ADLVVTND---S-GP-MHLAAALGTPTVAL 223 (279)
T ss_pred CCHHHHHHHHHh-CCEEEeeC---C-HH-HHHHHHcCCCEEEE
Confidence 678999999996 99999873 2 43 44456999999995
No 169
>PLN03004 UDP-glycosyltransferase
Probab=88.07 E-value=11 Score=43.83 Aligned_cols=84 Identities=14% Similarity=0.113 Sum_probs=56.4
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEE
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHI 710 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDv--fV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~d-g~~G~l~ 710 (805)
.++...+ +++..++.. ..++ ||.= +--++++||+++|+|+|+. +....+..+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4577777 777877776 4555 6642 2234899999999999995 44455555543 3578777
Q ss_pred CC-----CCHHHHHHHHHHHHHHhhCCHHHHH
Q 003655 711 DP-----YHGEQAAEILVDFFEKCKADPSYWD 737 (805)
Q Consensus 711 ~p-----~d~e~lA~aI~~~l~~l~~dp~~~~ 737 (805)
+. -+.+++++++.+++ .|+++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHH
Confidence 52 26788888887666 6665443
No 170
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=83.93 E-value=25 Score=40.95 Aligned_cols=141 Identities=16% Similarity=0.176 Sum_probs=72.1
Q ss_pred CCcEEEEEeecc--CCCCHHHHHHHHHHhHccCCCeEEEE-EeCCCCC-CCccHHHHHHHHHHHHHHHhcCCCCcEEEec
Q 003655 569 NKPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVV-VGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 569 ~k~iIl~vGRL~--~~Kgi~~LleA~~~l~~~~~~v~LvI-VG~g~~~-~~~d~ee~~e~~~l~~li~~~~L~~~V~flG 644 (805)
+..+.++.|.+. +.+.+..+..++..+.. ++++ +.+.... ...+.++...........++ ..++....+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~-----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGKR-----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcCC-----CeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe
Confidence 456778888765 33455566666665532 3444 4331110 00000000000001122222 235556666
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEEC-----CCC
Q 003655 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID-----PYH 714 (805)
Q Consensus 645 ~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~dg-~~G~l~~-----p~d 714 (805)
+++..++... . +.++||.- +=.++++||+.+|+|+|+- +....+..+.+. +.|+-+. .-+
T Consensus 334 ----W~PQ~~iL~h-~-~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~ 403 (455)
T PLN02152 334 ----WCSQIEVLRH-R-AVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVE 403 (455)
T ss_pred ----eCCHHHHhCC-c-ccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCc
Confidence 7777777662 1 12345542 2234899999999999995 333444444441 2455442 125
Q ss_pred HHHHHHHHHHHH
Q 003655 715 GEQAAEILVDFF 726 (805)
Q Consensus 715 ~e~lA~aI~~~l 726 (805)
.+++++++.+++
T Consensus 404 ~e~l~~av~~vm 415 (455)
T PLN02152 404 RGEIRRCLEAVM 415 (455)
T ss_pred HHHHHHHHHHHH
Confidence 788888887766
No 171
>PLN02764 glycosyltransferase family protein
Probab=82.99 E-value=42 Score=39.13 Aligned_cols=77 Identities=10% Similarity=0.076 Sum_probs=50.1
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc-CceEEEECC--
Q 003655 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVN-GKSGYHIDP-- 712 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~G----G~~EiI~d-g~~G~l~~p-- 712 (805)
+...+ +++..++... . +.++||.- +--++++||+++|+|+|+-... ..+..+.+ -..|+.+.+
T Consensus 319 ~v~~~----W~PQ~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~ 388 (453)
T PLN02764 319 VVWGG----WVQQPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE 388 (453)
T ss_pred cEEeC----CCCHHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc
Confidence 55556 7888888773 1 24567753 2234899999999999996443 34445533 356666532
Q ss_pred ---CCHHHHHHHHHHHH
Q 003655 713 ---YHGEQAAEILVDFF 726 (805)
Q Consensus 713 ---~d~e~lA~aI~~~l 726 (805)
-+.+++++++.+++
T Consensus 389 ~~~~~~e~i~~av~~vm 405 (453)
T PLN02764 389 TGWFSKESLRDAINSVM 405 (453)
T ss_pred CCccCHHHHHHHHHHHh
Confidence 26678888886666
No 172
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=82.86 E-value=9 Score=42.72 Aligned_cols=103 Identities=9% Similarity=0.037 Sum_probs=64.9
Q ss_pred CCcEEEEEeeccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCC
Q 003655 569 NKPILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 569 ~k~iIl~vGRL~~~Kgi--~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~ 646 (805)
++.+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ .+.+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e---------~e~~~~~~i~~~~~~~~~~~l~g-- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK---------DDLACVNEIAQGCQTPPVTALAG-- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh---------HHHHHHHHHHHhcCCCccccccC--
Confidence 34566676665566654 467777776654 3578888886532 11222334444333223355677
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 647 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 647 ~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
..+..|+..+++. ++++|..- + | .+-=|-|.|+|+|+-
T Consensus 250 --~~sL~el~ali~~-a~l~v~nD---S-G-p~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 --KTTFPELGALIDH-AQLFIGVD---S-A-PAHIAAAVNTPLICL 287 (352)
T ss_pred --CCCHHHHHHHHHh-CCEEEecC---C-H-HHHHHHHcCCCEEEE
Confidence 7788999999996 99999863 2 3 234466889999984
No 173
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=82.74 E-value=56 Score=34.39 Aligned_cols=158 Identities=9% Similarity=0.023 Sum_probs=80.2
Q ss_pred CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc-HHH
Q 003655 601 LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG-LTV 679 (805)
Q Consensus 601 ~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fG-ltv 679 (805)
.+++.+|..... +++.++++ .++|.|.-. ....++ +.+ +++.+..+--+... ...
T Consensus 48 gA~VtVVap~i~------------~el~~l~~----~~~i~~~~r---~~~~~d----l~g-~~LViaATdD~~vN~~I~ 103 (223)
T PRK05562 48 GCYVYILSKKFS------------KEFLDLKK----YGNLKLIKG---NYDKEF----IKD-KHLIVIATDDEKLNNKIR 103 (223)
T ss_pred CCEEEEEcCCCC------------HHHHHHHh----CCCEEEEeC---CCChHH----hCC-CcEEEECCCCHHHHHHHH
Confidence 466777765543 23333333 356777741 122222 233 55444443333333 334
Q ss_pred HHHHHcCCcEEEcCcccccccc-----ccCceEEEE-CCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCH
Q 003655 680 VEAMTCGLPTFATCKGGPAEII-----VNGKSGYHI-DPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW 753 (805)
Q Consensus 680 lEAMA~GlPVVaT~~GG~~EiI-----~dg~~G~l~-~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw 753 (805)
-+|.+.|.+|.+.+.....+++ ..|.--+-+ ..+....+|..|.+-++.++.+-+.+-+.....|..+.+.
T Consensus 104 ~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~~l~~~R~~vk~~--- 180 (223)
T PRK05562 104 KHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIEYVTKIRNKAKKN--- 180 (223)
T ss_pred HHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 5667789999887666555554 333222222 2234456777777777776655555556666667766554
Q ss_pred HHHHHHHHHHHHHhchhhhhchhhHHhhhhHHHHHH
Q 003655 754 KIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFY 789 (805)
Q Consensus 754 ~~~a~rll~Ly~~~~~w~~~~~~~~~~~~~y~~~~~ 789 (805)
..-+++.+....-.+|+.+.+. +...-|.|++
T Consensus 181 -~~r~~i~~~l~~~~~~~~l~~~---~~~~~l~~~~ 212 (223)
T PRK05562 181 -ELKDEIIEFICSDDFYFFYKKG---KANLILSMFY 212 (223)
T ss_pred -hHHHHHHHHHhChHHHHHHHcc---hHHHHHHHhh
Confidence 2223333333333556655333 3333444544
No 174
>PLN00164 glucosyltransferase; Provisional
Probab=82.72 E-value=18 Score=42.47 Aligned_cols=92 Identities=12% Similarity=0.114 Sum_probs=54.3
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCceEEEECC--
Q 003655 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VNGKSGYHIDP-- 712 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI-~dg~~G~l~~p-- 712 (805)
+...+ +++..++...= +.++||.- -|++ +++||+++|+|+|+- +..-....+ +.-+.|+-++.
T Consensus 341 ~~v~~----w~PQ~~iL~h~--~vg~fvtH---~Gwn-S~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~ 410 (480)
T PLN00164 341 LVWPT----WAPQKEILAHA--AVGGFVTH---CGWN-SVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR 410 (480)
T ss_pred eEEee----cCCHHHHhcCc--ccCeEEee---cccc-hHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc
Confidence 55556 77777776621 13356642 3333 899999999999995 444444444 33356776632
Q ss_pred -----CCHHHHHHHHHHHHHHhhCCHH-HHHHHHHHHHH
Q 003655 713 -----YHGEQAAEILVDFFEKCKADPS-YWDKISLGGLK 745 (805)
Q Consensus 713 -----~d~e~lA~aI~~~l~~l~~dp~-~~~~ms~~ar~ 745 (805)
-+.++++++|.+++ .+++ ..++|.+++.+
T Consensus 411 ~~~~~~~~e~l~~av~~vm----~~~~~~~~~~r~~a~~ 445 (480)
T PLN00164 411 KRDNFVEAAELERAVRSLM----GGGEEEGRKAREKAAE 445 (480)
T ss_pred ccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 25678888886665 5543 24444444433
No 175
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=82.63 E-value=9.5 Score=39.86 Aligned_cols=103 Identities=16% Similarity=0.091 Sum_probs=60.6
Q ss_pred CCCcEEEEEeeccCCCCHHH--HHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecC
Q 003655 568 RNKPILFTMARLDRVKNLTG--LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 645 (805)
Q Consensus 568 ~~k~iIl~vGRL~~~Kgi~~--LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~ 645 (805)
++..+++..|.=.+.|.... ..+.+..+.+.+ .+++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~---------~~~~~~~~~~~~~~-~~~~~~~~- 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE---------QEKEIADQIAAGLQ-NPVINLAG- 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH---------HHHHHHHHHHTTHT-TTTEEETT-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH---------HHHHHHHHHHHhcc-cceEeecC-
Confidence 34556677776666776544 777777776643 78899998732 11223333333332 12578888
Q ss_pred CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 646 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 646 ~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
..+..++..+++. +|++|.+ ++.+ +-=|.|.|+|+|+-
T Consensus 171 ---~~~l~e~~ali~~-a~~~I~~---Dtg~--~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ---KTSLRELAALISR-ADLVIGN---DTGP--MHLAAALGTPTVAL 208 (247)
T ss_dssp ---TS-HHHHHHHHHT-SSEEEEE---SSHH--HHHHHHTT--EEEE
T ss_pred ---CCCHHHHHHHHhc-CCEEEec---CChH--HHHHHHHhCCEEEE
Confidence 6778999999996 9999987 3333 45588999999995
No 176
>PLN03015 UDP-glucosyl transferase
Probab=82.30 E-value=1.1e+02 Score=35.90 Aligned_cols=77 Identities=16% Similarity=0.097 Sum_probs=46.2
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccc-ccCceEEEEC---
Q 003655 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEII-VNGKSGYHID--- 711 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~----GG~~EiI-~dg~~G~l~~--- 711 (805)
+.+.+ +++..++... . +.+.||.- -| -++++||+++|+|+|+-.. .-.+..+ +.-+.|.-+.
T Consensus 337 l~v~~----W~PQ~~vL~h-~-~vg~fvtH---~G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~ 406 (470)
T PLN03015 337 LVVTQ----WAPQVEILSH-R-SIGGFLSH---CG-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELP 406 (470)
T ss_pred eEEEe----cCCHHHHhcc-C-ccCeEEec---CC-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccc
Confidence 44555 7777777763 1 23456643 22 3489999999999999633 2333333 3334565552
Q ss_pred ---CCCHHHHHHHHHHHH
Q 003655 712 ---PYHGEQAAEILVDFF 726 (805)
Q Consensus 712 ---p~d~e~lA~aI~~~l 726 (805)
.-..++++++|.+++
T Consensus 407 ~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 407 SEKVIGREEVASLVRKIV 424 (470)
T ss_pred cCCccCHHHHHHHHHHHH
Confidence 125677777886665
No 177
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=82.15 E-value=12 Score=41.28 Aligned_cols=102 Identities=15% Similarity=0.067 Sum_probs=63.3
Q ss_pred CCCCcE-EEEEee-ccCCCCHH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEE
Q 003655 567 DRNKPI-LFTMAR-LDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 567 ~~~k~i-Il~vGR-L~~~Kgi~--~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~f 642 (805)
+.++++ ++..|. ..+.|... ...+.+..+.+ .+.+++++|+..+ .+...++.+..+ ...+.+
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~ivl~G~~~e-----------~~~~~~i~~~~~-~~~~~l 236 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQVVLFGSAKD-----------HPAGNEIEALLP-GELRNL 236 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEEEEEEChhh-----------HHHHHHHHHhCC-cccccC
Confidence 334444 455554 34566544 67777777654 2478899987633 222333433322 122335
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 643 lG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
.| ..+..++..+++. +|++|..- +-+ +-=|-|.|+|+|+-
T Consensus 237 ~g----~~sL~el~ali~~-a~l~I~~D---SGp--~HlAaA~~~P~i~l 276 (334)
T TIGR02195 237 AG----ETSLDEAVDLIAL-AKAVVTND---SGL--MHVAAALNRPLVAL 276 (334)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEeeC---CHH--HHHHHHcCCCEEEE
Confidence 66 6788999999996 99999863 222 44477999999984
No 178
>PLN02555 limonoid glucosyltransferase
Probab=81.73 E-value=38 Score=39.78 Aligned_cols=94 Identities=17% Similarity=0.181 Sum_probs=58.1
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC
Q 003655 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNG-KSGYHID 711 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~----~GG~~EiI~dg-~~G~l~~ 711 (805)
.+++...+ +++..++... . +.++||.- -| -++++||+.+|+|+|+.. .......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45666666 7778777742 1 35677753 23 348999999999999963 33344445444 5677662
Q ss_pred -----C--CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 003655 712 -----P--YHGEQAAEILVDFFEKCKADPSYWDKISLGGLK 745 (805)
Q Consensus 712 -----p--~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~ 745 (805)
. -+.+++++++.+++ .+++ .++|.++|++
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~~-g~~~r~ra~~ 441 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGEK-AAELKQNALK 441 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCch-HHHHHHHHHH
Confidence 1 14678888887766 4432 3444444444
No 179
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=81.63 E-value=2.3 Score=45.85 Aligned_cols=80 Identities=11% Similarity=0.023 Sum_probs=48.7
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCC--CChhhhhhcccccc--cchh-hhHhHHHhhcCCEEE
Q 003655 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWKNLDDKYH--FSCQ-FTADLIAMNHTDFII 477 (805)
Q Consensus 404 ~kPDlIh~h~~~-~~lva~llar~lgip~v~t~H~l~~~k~~--~s~~~~~~~~~~y~--f~~~-~~~e~~a~~~AD~II 477 (805)
.+.||.|+.... ++++|++++.+.|+|+++|-|+....... -....|-.....++ +... -..-+.++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 467999987765 48999999999999999999996321110 00111110000000 0011 113456899999999
Q ss_pred ecCHHH
Q 003655 478 TSTFQE 483 (805)
Q Consensus 478 t~S~~~ 483 (805)
+.....
T Consensus 251 ~l~~~n 256 (268)
T PF11997_consen 251 PLYEYN 256 (268)
T ss_pred ccchhh
Confidence 988653
No 180
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=80.89 E-value=79 Score=34.18 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=52.3
Q ss_pred HHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCc
Q 003655 585 LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKG 664 (805)
Q Consensus 585 i~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaD 664 (805)
+..+++++..+.+.. +.+++++.-... .| .+..+++.+.+.-...| +. ..+..|+...++. ++
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~---~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~~ 252 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP---QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-AR 252 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc---hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-CC
Confidence 456777777665532 455656553321 11 12334444444333333 23 4567899999996 99
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 665 AFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 665 vfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
++|...+. ..+=|+++|+|+++-
T Consensus 253 ~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 253 LVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred EEEEechH-----HHHHHHHcCCCEEEe
Confidence 88865542 578899999999975
No 181
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=80.73 E-value=1.1e+02 Score=34.85 Aligned_cols=88 Identities=17% Similarity=0.250 Sum_probs=54.2
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc-ccccccc-CceEEE--ECCC
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG-PAEIIVN-GKSGYH--IDPY 713 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG-~~EiI~d-g~~G~l--~~p~ 713 (805)
.+|.+.. .....++-..++. +|++|-.-+ -+++=||+.|+|+|+-..-. ...+.++ |..|+. +.|.
T Consensus 266 ~~i~~~~----d~~~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~ 335 (385)
T COG2327 266 AEILVSS----DEYAEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPL 335 (385)
T ss_pred cceEeec----chHHHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCC
Confidence 5677764 1113566668885 888885433 15788999999999953332 2223322 334444 4566
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHH
Q 003655 714 HGEQAAEILVDFFEKCKADPSYWDK 738 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ 738 (805)
|.+.+.....+.+. .+++.+++
T Consensus 336 ~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 336 DAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred chHHHHHHHHHHHh---ccHHHHhh
Confidence 78888888877663 56665444
No 182
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=78.11 E-value=5.2 Score=36.07 Aligned_cols=84 Identities=13% Similarity=0.176 Sum_probs=57.9
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHH--HHHHHHccCcEEEeCCCCCCCc---HH
Q 003655 604 LVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE--LYRYICDTKGAFVQPALYEAFG---LT 678 (805)
Q Consensus 604 LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~e--l~~~ia~aaDvfV~PS~~E~fG---lt 678 (805)
++|||+-.+ ....+++.++++|. ...++|... .....+ +...+.+ +|+.|++..+=+.. .+
T Consensus 2 vliVGG~~~----------~~~~~~~~~~~~G~--~~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~v 67 (97)
T PF10087_consen 2 VLIVGGRED----------RERRYKRILEKYGG--KLIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWKV 67 (97)
T ss_pred EEEEcCCcc----------cHHHHHHHHHHcCC--EEEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHHH
Confidence 678888432 24778889999886 445554222 333444 8888885 99999987755544 34
Q ss_pred HHHHHHcCCcEEEcCcccccccc
Q 003655 679 VVEAMTCGLPTFATCKGGPAEII 701 (805)
Q Consensus 679 vlEAMA~GlPVVaT~~GG~~EiI 701 (805)
--+|-..|+|++.++..|...+.
T Consensus 68 k~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 68 KKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHcCCcEEEECCCCHHHHH
Confidence 56788899999999877765543
No 183
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=77.07 E-value=14 Score=36.55 Aligned_cols=60 Identities=18% Similarity=0.151 Sum_probs=36.0
Q ss_pred CCceEEEEcCCCchHH-HH-HHHHH-c-CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEec
Q 003655 404 GKPDLIIGNYSDGNIV-AS-LLAHK-L-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITS 479 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lv-a~-llar~-l-gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 479 (805)
.+||+|+|.++..+.+ .. +-++. . ++|+++.+-++.... .. +.-..+|..++.
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H-----~~------------------W~~~~~D~y~Va 144 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVH-----PF------------------WIHPGVDRYFVA 144 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCC-----cC------------------eecCCCCEEEEC
Confidence 5899999988876444 33 33333 3 467654443321100 01 234589999999
Q ss_pred CHHHHhh
Q 003655 480 TFQEIAG 486 (805)
Q Consensus 480 S~~~~~~ 486 (805)
|+..++.
T Consensus 145 se~~~~~ 151 (169)
T PF06925_consen 145 SEEVKEE 151 (169)
T ss_pred CHHHHHH
Confidence 9988774
No 184
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=76.47 E-value=21 Score=39.54 Aligned_cols=102 Identities=12% Similarity=0.065 Sum_probs=63.3
Q ss_pred CcEEEEEeeccCCCC--HHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCC
Q 003655 570 KPILFTMARLDRVKN--LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 570 k~iIl~vGRL~~~Kg--i~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~ 647 (805)
..+++..|.-.+.|. .+...+.+..+.+ .+..++++|+..+ .+.+...++.+..+-..-+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~---------~e~~~~~~i~~~~~~~~~~~l~g--- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK---------DELAMVNEIAQGCQTPRVTSLAG--- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH---------HHHHHHHHHHhhCCCCcccccCC---
Confidence 345566665445554 4566666666654 3578899986532 11222333333333222344667
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 648 ~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
..+..|+..+++. ++++|.. ++- .+-=|-|.|+|+|+-
T Consensus 248 -~~sL~el~ali~~-a~l~Vs~---DSG--p~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 -KLTLPQLAALIDH-ARLFIGV---DSV--PMHMAAALGTPLVAL 285 (344)
T ss_pred -CCCHHHHHHHHHh-CCEEEec---CCH--HHHHHHHcCCCEEEE
Confidence 7788999999996 9999987 333 344578899999994
No 185
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=74.64 E-value=8.1 Score=38.57 Aligned_cols=110 Identities=12% Similarity=0.113 Sum_probs=54.1
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDlIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
..+|+|.+..-.. +-+..+.-...++|.++-+|.-.. .||.+...-+.+ .|.+. .....-.||.|+.+|..
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~--~~~~~-----ni~saLaAD~v~FNS~~ 129 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDF--QYGMN-----NIYSALAADRVVFNSAF 129 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCccccc--cHHHH-----HHHHHHhceeeeecchh
Confidence 4679999765432 222222223457999999997422 234332111111 12111 22344489999999976
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCcEEEecCCc
Q 003655 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA 526 (805)
Q Consensus 483 ~~~~~~~~vgqY~~~~~f~~p~l~~~~~gI~~~~~ki~VIpnGV 526 (805)
-.+..-+.+.++-.. ||+..- ..-++...+|-.|+|.|+
T Consensus 130 nr~sFL~~~~~fL~~----~PD~~p-~~~~~~I~~Ks~VL~~pi 168 (168)
T PF12038_consen 130 NRDSFLDGIPSFLKR----MPDHRP-KGLVERIRAKSQVLPVPI 168 (168)
T ss_pred hHHHHHHHHHHHHHH----CCCCCc-hhHHHHHhccCeecCCCC
Confidence 555444433333211 232211 011122245777777764
No 186
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=74.51 E-value=28 Score=38.02 Aligned_cols=99 Identities=12% Similarity=0.005 Sum_probs=63.8
Q ss_pred CCcEEEEEeeccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCC
Q 003655 569 NKPILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 569 ~k~iIl~vGRL~~~Kgi--~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~ 646 (805)
++.+++..|.=.+.|.. +...+.+..+.+. +.+++++|+++. +.+...++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~----------e~~~~~~i~~~~~---~~~l~g-- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA----------EKQRAERIAEALP---GAVVLP-- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH----------HHHHHHHHHhhCC---CCeecC--
Confidence 34456666654456655 4677777776542 578888866542 2233444444332 235667
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 647 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 647 ~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
..+..++..+++. +|++|.+ ++-+ +-=|-|.|+|+|+-
T Consensus 242 --~~sL~el~ali~~-a~l~I~~---DSgp--~HlAaa~g~P~i~l 279 (319)
T TIGR02193 242 --KMSLAEVAALLAG-ADAVVGV---DTGL--THLAAALDKPTVTL 279 (319)
T ss_pred --CCCHHHHHHHHHc-CCEEEeC---CChH--HHHHHHcCCCEEEE
Confidence 6788999999996 9999987 3333 33466889999984
No 187
>PLN02207 UDP-glycosyltransferase
Probab=73.24 E-value=1.5e+02 Score=34.83 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=49.8
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEEC-
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHID- 711 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~d-g~~G~l~~- 711 (805)
++....+ +++..++...= +.+.||.- -|+ ++++||+.+|+|+++- +.-..+..+.+ -+.|+-+.
T Consensus 332 ~~g~i~~----W~PQ~~IL~H~--~vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~ 401 (468)
T PLN02207 332 GRGMICG----WSPQVEILAHK--AVGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401 (468)
T ss_pred CCeEEEE----eCCHHHHhccc--ccceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEec
Confidence 4555556 77888887742 24456643 223 3789999999999995 33334444333 34565331
Q ss_pred --------CCCHHHHHHHHHHHH
Q 003655 712 --------PYHGEQAAEILVDFF 726 (805)
Q Consensus 712 --------p~d~e~lA~aI~~~l 726 (805)
.-+.++++++|.+++
T Consensus 402 ~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 402 DYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccccccCCcccHHHHHHHHHHHH
Confidence 126688888987777
No 188
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=72.53 E-value=29 Score=38.56 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=68.3
Q ss_pred CcEEEEEe-eccCCCCHH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCC
Q 003655 570 KPILFTMA-RLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 570 k~iIl~vG-RL~~~Kgi~--~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~ 646 (805)
+.+++..| .-...|+.. ...+.+..+.+.. .++++.|+. + +.+...++.+.++ +.+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~-~----------e~e~~~~i~~~~~--~~~~l~~-- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGP-D----------EEERAEEIAKGLP--NAVILAG-- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecCh-H----------HHHHHHHHHHhcC--CccccCC--
Confidence 45667777 555667654 6777777777754 789999987 2 2344555665554 2233666
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 647 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 647 ~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
..+..++..+++. ||++|.+.. |. +-=|-|.|+|+|+-
T Consensus 239 --k~sL~e~~~li~~-a~l~I~~DS----g~-~HlAaA~~~P~I~i 276 (334)
T COG0859 239 --KTSLEELAALIAG-ADLVIGNDS----GP-MHLAAALGTPTIAL 276 (334)
T ss_pred --CCCHHHHHHHHhc-CCEEEccCC----hH-HHHHHHcCCCEEEE
Confidence 7889999999996 999998743 32 34478899999995
No 189
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=70.38 E-value=1e+02 Score=35.64 Aligned_cols=143 Identities=12% Similarity=0.130 Sum_probs=77.5
Q ss_pred CCcEEEEEeeccC-----CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcC--CCCcEE
Q 003655 569 NKPILFTMARLDR-----VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK--LNGQFR 641 (805)
Q Consensus 569 ~k~iIl~vGRL~~-----~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~--L~~~V~ 641 (805)
+..++++.|.+.. .+-...++.+++++ +++.|+++=..... . .+.+... ..++|.
T Consensus 277 ~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~-----------~---~~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 277 HSVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS-----------I---YFPEGLPNRGRGNVV 338 (496)
T ss_pred CCeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc-----------h---hhhhcCCCCCcCceE
Confidence 3566777787753 33334455555544 56676666655331 0 0222221 145788
Q ss_pred EecCCCCcCChHHHHHHHHcc-CcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Cccccccccc-cCceEEEECCCCH
Q 003655 642 WISSQMNRVRNGELYRYICDT-KGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIV-NGKSGYHIDPYHG 715 (805)
Q Consensus 642 flG~~~~~v~~~el~~~ia~a-aDvfV~PS~~E~fGltvlEAMA~GlPVVaT----~~GG~~EiI~-dg~~G~l~~p~d~ 715 (805)
..+ +++..++. +... .++||. .-|++ +++||..+|+|+++. +..-.+..+. +|..|.+. ..+.
T Consensus 339 ~~~----W~PQ~~ll--l~H~~v~~FvT---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~-~~~~ 407 (496)
T KOG1192|consen 339 LSK----WAPQNDLL--LDHPAVGGFVT---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD-KRDL 407 (496)
T ss_pred Eec----CCCcHHHh--cCCCcCcEEEE---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe-hhhc
Confidence 877 77777866 2221 345553 24555 459999999999964 3333444444 44444443 3222
Q ss_pred --HHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003655 716 --EQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 716 --e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
..+.+++.+++ .++++.+...+-+.
T Consensus 408 ~~~~~~~~~~~il----~~~~y~~~~~~l~~ 434 (496)
T KOG1192|consen 408 VSEELLEAIKEIL----ENEEYKEAAKRLSE 434 (496)
T ss_pred CcHHHHHHHHHHH----cChHHHHHHHHHHH
Confidence 22556665444 77776655444444
No 190
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=68.80 E-value=34 Score=35.18 Aligned_cols=38 Identities=13% Similarity=0.178 Sum_probs=26.0
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCC
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLP 340 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~ 340 (805)
|||++....|+-. ..+. .|++.|++.||+|. |+++...
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESSS
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCCC
Confidence 8999999888732 2234 56677877789999 9987643
No 191
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=68.37 E-value=47 Score=36.39 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=60.2
Q ss_pred EEEEEeeccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCc
Q 003655 572 ILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 572 iIl~vGRL~~~Kgi--~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~ 649 (805)
+++..|.-...|.. +...+.+..+.+ .+.++++.|+++. +.+...++.+. ...+...| .
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~--~~~~ivl~~G~~~----------e~~~~~~i~~~---~~~~~l~g----~ 241 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAP--SGLRIKLPWGAEH----------EEQRAKRLAEG---FPYVEVLP----K 241 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHH--CCCeEEEeCCCHH----------HHHHHHHHHcc---CCcceecC----C
Confidence 33444543344543 467777777654 2567777654532 22333444332 23466777 6
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 650 v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
.+..|+..+++. +|++|..-. | .+-=|-|+|+|+|+-
T Consensus 242 ~sL~elaali~~-a~l~I~nDS----G-p~HlA~A~g~p~val 278 (322)
T PRK10964 242 LSLEQVARVLAG-AKAVVSVDT----G-LSHLTAALDRPNITL 278 (322)
T ss_pred CCHHHHHHHHHh-CCEEEecCC----c-HHHHHHHhCCCEEEE
Confidence 788999999996 999998732 2 355588999999994
No 192
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=67.06 E-value=28 Score=35.38 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=29.3
Q ss_pred CceEEEEcCCCc--hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003655 405 KPDLIIGNYSDG--NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 405 kPDlIh~h~~~~--~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
+||+++...... |++ ..+++.|+|++..---+.... - ..|.....+ -+..++..|.|.+.|+.
T Consensus 95 ~P~~~i~~EtElWPnll--~~a~~~~ip~~LvNarls~~s----~-------~~~~~~~~~--~r~~l~~f~~i~aqs~~ 159 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLL--REAKRRGIPVVLVNARLSERS----F-------RRYRRFPFL--FRPLLSRFDRILAQSEA 159 (186)
T ss_dssp --SEEEEES----HHHH--HH-----S-EEEEEE-------------------------HH--HHHHGGG-SEEEESSHH
T ss_pred CCCEEEEEccccCHHHH--HHHhhcCCCEEEEeeeecccc----c-------hhhhhhHHH--HHHHHHhCCEEEECCHH
Confidence 599988766554 443 345667999876543322111 0 111111111 23468899999999998
Q ss_pred HHhhcc
Q 003655 483 EIAGSK 488 (805)
Q Consensus 483 ~~~~~~ 488 (805)
.++.+.
T Consensus 160 da~r~~ 165 (186)
T PF04413_consen 160 DAERFR 165 (186)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887443
No 193
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=66.03 E-value=15 Score=39.66 Aligned_cols=70 Identities=13% Similarity=0.122 Sum_probs=47.7
Q ss_pred hHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-cEEEcCcc--ccccccccCceEEEECCCCHHHHHHHH
Q 003655 652 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKG--GPAEIIVNGKSGYHIDPYHGEQAAEIL 722 (805)
Q Consensus 652 ~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~Gl-PVVaT~~G--G~~EiI~dg~~G~l~~p~d~e~lA~aI 722 (805)
..+..+.|++ +..+++|.-...+..-++|||++|| |||.++.- ...|++.=....+.++..+..++.+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 3456777775 8888888777678889999999998 88876422 234556445566777665555544444
No 194
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=65.60 E-value=96 Score=33.43 Aligned_cols=151 Identities=15% Similarity=0.158 Sum_probs=83.4
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCc
Q 003655 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 570 k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~ 649 (805)
.+.++.++.=.+.|+++.|+++++..+. .+++=..|.|.. ..-.+..+.+..|++ +.++++...
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~----------~hl~~~~l~~~~G~~--~~~Vpy~G~- 141 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS----------DHLAAALLAKAAGIK--FTHVPYDGG- 141 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH----------HHHHHHHHHHHHT-----EEEE-SSH-
T ss_pred cceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch----------HHHHHHHHHHHhCCc--eEEEEeCCc-
Confidence 3567777777789999999999876532 234433333321 111334556677763 444443222
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC--cEEEc---Ccc-----------ccccccccCceEEEECCC
Q 003655 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL--PTFAT---CKG-----------GPAEIIVNGKSGYHIDPY 713 (805)
Q Consensus 650 v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~Gl--PVVaT---~~G-----------G~~EiI~dg~~G~l~~p~ 713 (805)
.+.+..++....|+.+.. .-......-.|. |+.++ +.. |..++....-.|+..+++
T Consensus 142 --~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~g 213 (274)
T PF03401_consen 142 --AEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPKG 213 (274)
T ss_dssp --HHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEETT
T ss_pred --cHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCCC
Confidence 345666676667776653 112334444443 22221 111 122333334468899999
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003655 714 HGEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
-+++..+.|.+++.+..+||+..+.+.+.+.
T Consensus 214 tp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~ 244 (274)
T PF03401_consen 214 TPDEIVDKLADAIKKALEDPEFQEFLEKMGL 244 (274)
T ss_dssp S-HHHHHHHHHHHHHHHT-HHHHHHHHHHTE
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHCCC
Confidence 9999999999999999999997776655544
No 195
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=63.78 E-value=17 Score=36.46 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=43.6
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHc------CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEE
Q 003655 403 QGKPDLIIGNYSDGNIVASLLAHKL------GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFI 476 (805)
Q Consensus 403 ~~kPDlIh~h~~~~~lva~llar~l------gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~I 476 (805)
+.+||+|++|.+..+....++++.+ |.++|++-- ....+ ..-..-++++.-||..
T Consensus 90 r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES-~aRv~------------------~lSlTGklly~~aD~f 150 (170)
T PF08660_consen 90 RERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES-FARVK------------------TLSLTGKLLYPFADRF 150 (170)
T ss_pred HhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe-eeecC------------------CCchHHHHHHHhCCEE
Confidence 3489999999999888888888888 888776421 10000 0001234567789999
Q ss_pred EecCHHHHh
Q 003655 477 ITSTFQEIA 485 (805)
Q Consensus 477 It~S~~~~~ 485 (805)
++..++.++
T Consensus 151 ~VQW~~l~~ 159 (170)
T PF08660_consen 151 IVQWEELAE 159 (170)
T ss_pred EEcCHHHHh
Confidence 998887765
No 196
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=63.15 E-value=2e+02 Score=32.27 Aligned_cols=125 Identities=8% Similarity=-0.039 Sum_probs=71.7
Q ss_pred CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHH----HHHHccCcEEEeCC--CCC
Q 003655 600 ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY----RYICDTKGAFVQPA--LYE 673 (805)
Q Consensus 600 ~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~----~~ia~aaDvfV~PS--~~E 673 (805)
.+.+++++|.|.- -+..-+...+.|. .+|.+...+....+.++++ .+... +|+.+..| ..-
T Consensus 173 ~~k~vLvIGaGem-----------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Tas 239 (338)
T PRK00676 173 KKASLLFIGYSEI-----------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESAY 239 (338)
T ss_pred cCCEEEEEcccHH-----------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCCC
Confidence 4579999999821 2222222333454 4688887665566677665 56665 89999753 333
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003655 674 AFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 674 ~fGltvlEAMA~GlPVVaT~~GG~~EiI~--dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v 747 (805)
+.|....|.+..-.+-+.-|.+-|+++=. ...+-.++ |.|++.+.+. .|-..|++....+...+
T Consensus 240 ~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~-------~n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 240 AFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQ-------KHLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 45555556554322246667777777631 12223344 5677666663 24455666666666655
No 197
>PLN02534 UDP-glycosyltransferase
Probab=62.43 E-value=2e+02 Score=33.97 Aligned_cols=77 Identities=9% Similarity=0.076 Sum_probs=46.6
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcE--EEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccc-cCceEEEE
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIV-NGKSGYHI 710 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDv--fV~PS~~E~fGltvlEAMA~GlPVVaT~~GG----~~EiI~-dg~~G~l~ 710 (805)
.++.+.| +++..++.. ..++ ||.- +-.++++||+++|+|+|+-...+ ....+. .-+.|+-+
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 4566666 777777766 3444 6643 33458999999999999964432 222222 21233322
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 003655 711 D---------------PYHGEQAAEILVDFF 726 (805)
Q Consensus 711 ~---------------p~d~e~lA~aI~~~l 726 (805)
. --+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025678888887776
No 198
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=61.61 E-value=94 Score=37.31 Aligned_cols=191 Identities=15% Similarity=0.122 Sum_probs=119.1
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCC-
Q 003655 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN- 637 (805)
Q Consensus 559 ~~~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~- 637 (805)
|..+|+ +.+..++...-.| .|=-...++.+.++.+.-|+..|++.--..- -...++..+++.|++
T Consensus 750 r~~y~L--p~d~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~----------ge~rf~ty~~~~Gl~p 815 (966)
T KOG4626|consen 750 RSQYGL--PEDAVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV----------GEQRFRTYAEQLGLEP 815 (966)
T ss_pred CCCCCC--CCCeEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEecccc----------chHHHHHHHHHhCCCc
Confidence 345677 5566555555544 3434667788888888789888877653321 125788889999995
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----ccCceEEEECC
Q 003655 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEII-----VNGKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI-----~dg~~G~l~~p 712 (805)
++|.|... ...+|=.+-.. .+||.+-+..+-|.- |-.|.+-+|+|+|.-...-.+.-| ..-+.|-++.
T Consensus 816 ~riifs~v----a~k~eHvrr~~-LaDv~LDTplcnGhT-Tg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia- 888 (966)
T KOG4626|consen 816 DRIIFSPV----AAKEEHVRRGQ-LADVCLDTPLCNGHT-TGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA- 888 (966)
T ss_pred cceeeccc----cchHHHHHhhh-hhhhcccCcCcCCcc-cchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh-
Confidence 67888863 22344444444 478888777665543 567889999999974222111111 1112333442
Q ss_pred CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHhchhhhhchh
Q 003655 713 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE--EKYTWKIYSQRLLTLTGVYGFWKHVSNL 776 (805)
Q Consensus 713 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~--e~ysw~~~a~rll~Ly~~~~~w~~~~~~ 776 (805)
.+.++..+.-. ++..|.+..+++...-+..-. --|+-..++..++.+|. ..|+.-.+-
T Consensus 889 k~~eEY~~iaV----~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~--~MW~~y~~G 948 (966)
T KOG4626|consen 889 KNREEYVQIAV----RLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYL--QMWKKYCSG 948 (966)
T ss_pred hhHHHHHHHHH----HhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHH--HHHHHhccC
Confidence 35666665553 345888888887766554322 23889999999999885 468754443
No 199
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=60.83 E-value=2e+02 Score=29.43 Aligned_cols=94 Identities=15% Similarity=0.120 Sum_probs=54.7
Q ss_pred CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHh-cCCCCcEEEecCCCCcCChHHHHHHHH
Q 003655 582 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYIC 660 (805)
Q Consensus 582 ~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~-~~L~~~V~flG~~~~~v~~~el~~~ia 660 (805)
..-.+.+.+.+..+.+....+.++........ ........... .....++..+.. ..+..++..+++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 256 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDD---------EDDDDFNEIDIKAEKFFNVIIIDY---SLSPDELLELIS 256 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccch---------hhHHHHHhhhhhcccccceeEecC---CCCHHHHHHHHh
Confidence 33455566677766664444555555544331 01111111110 222334444432 567889999999
Q ss_pred ccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC
Q 003655 661 DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 693 (805)
Q Consensus 661 ~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~ 693 (805)
. ++++|..... ..+=|+++|+|+|+-.
T Consensus 257 ~-~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 257 Q-ADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred c-CCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 5 9999977652 5788999999999854
No 200
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=60.70 E-value=62 Score=35.90 Aligned_cols=99 Identities=14% Similarity=0.071 Sum_probs=60.5
Q ss_pred cEEEEEee-ccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCC--Cc-EEEec
Q 003655 571 PILFTMAR-LDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN--GQ-FRWIS 644 (805)
Q Consensus 571 ~iIl~vGR-L~~~Kgi--~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~--~~-V~flG 644 (805)
.+++..|. ..+.|.. +.+.+.+..+.+ .+++++++|+..+ .+...++.+..+-. ++ +.+.|
T Consensus 182 ~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e-----------~~~~~~i~~~~~~~~~~~~~~l~g 248 (348)
T PRK10916 182 IIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD-----------HEAGNEILAALNTEQQAWCRNLAG 248 (348)
T ss_pred EEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh-----------HHHHHHHHHhcccccccceeeccC
Confidence 34455554 2345543 456666666653 3678888887632 22333444333211 12 44556
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003655 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 645 ~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT 692 (805)
..+..++..+++. ++++|..- + | .+-=|-|.|+|+|+-
T Consensus 249 ----~~sL~el~ali~~-a~l~I~nD---T-G-p~HlAaA~g~P~val 286 (348)
T PRK10916 249 ----ETQLEQAVILIAA-CKAIVTND---S-G-LMHVAAALNRPLVAL 286 (348)
T ss_pred ----CCCHHHHHHHHHh-CCEEEecC---C-h-HHHHHHHhCCCEEEE
Confidence 6678999999996 99999863 2 2 244578899999983
No 201
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=56.35 E-value=6.7 Score=36.98 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=15.4
Q ss_pred hHHHHHHHHHcCCcEEEEecC
Q 003655 417 NIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 417 ~lva~llar~lgip~v~t~H~ 437 (805)
...+..++.++++|.+.....
T Consensus 110 ~~~~~~vaE~~~iP~~~~~~~ 130 (139)
T PF03033_consen 110 AFAAALVAEQLGIPGVANRLF 130 (139)
T ss_dssp HTHHHHHHHHHTS-EEEEESS
T ss_pred cCccceeEhhhCchHHHHhhC
Confidence 457778899999998876654
No 202
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=53.05 E-value=1.7e+02 Score=32.28 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=56.4
Q ss_pred HHHHHHHHCCCccccceeEEeCC--CCCCCCCccc--cceeeecCccCeEEEEeccccCCcccccccccccchhhHHHHH
Q 003655 316 EMLLRIKQQGLDITPQILIITRL--LPDAVGTTCG--QRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYT 391 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~--~~~~~g~~~~--~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~ 391 (805)
.|...|.++||.|- |++-. .|-..|.-.+ -++......+|+.|-.+|.+...| .+..-+
T Consensus 70 ~L~~~l~~~G~rVa----VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG-------------GlS~at 132 (323)
T COG1703 70 ALGRELRERGHRVA----VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG-------------GLSRAT 132 (323)
T ss_pred HHHHHHHHCCcEEE----EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch-------------hhhHHH
Confidence 67788899999999 65533 3323333222 234555556678777787775433 112222
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003655 392 EDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 392 ~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~l 438 (805)
.++...+- ...+|+|+.-....+-.=.-++....+-++++..+.
T Consensus 133 ~~~i~~ld---AaG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 133 REAIKLLD---AAGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred HHHHHHHH---hcCCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 23332222 247999997665443322333444455556666654
No 203
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=49.94 E-value=1.3e+02 Score=35.17 Aligned_cols=96 Identities=7% Similarity=0.041 Sum_probs=56.4
Q ss_pred HHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-cEEEcCcc--ccccccccCceEEEECCCCHHHHHHHHHHHHHHh
Q 003655 653 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKG--GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 729 (805)
Q Consensus 653 ~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~Gl-PVVaT~~G--G~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l 729 (805)
....+.+++ +-.+++|+-.+...-.++||+.+|| |||.++.- ...+++.-..-++.++ .+++-+.|.+.+..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHh-
Confidence 345677775 8899999999988889999999998 99998552 2234443334455554 33333333443322
Q ss_pred hCCHHHHHHHHHHHHHHHHHhCCHH
Q 003655 730 KADPSYWDKISLGGLKRIEEKYTWK 754 (805)
Q Consensus 730 ~~dp~~~~~ms~~ar~~v~e~ysw~ 754 (805)
.-.....+|.++-...+..+|.|.
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~ 433 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKK 433 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeC
Confidence 122333444444444444444444
No 204
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=49.62 E-value=43 Score=38.29 Aligned_cols=85 Identities=12% Similarity=-0.077 Sum_probs=57.0
Q ss_pred HHHHHcCCcEEEcCcc---ccccccccCceEEEECC-CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003655 680 VEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDP-YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 680 lEAMA~GlPVVaT~~G---G~~EiI~dg~~G~l~~p-~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~ 755 (805)
-=-|+||-.|+..... -..+.+..+++-+-+.. +|..++.++| +-+.+|++..++|+++|.+.+.+..+.+.
T Consensus 231 kylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v----~w~~~~~~~A~~IA~~g~~f~~~~L~~~~ 306 (395)
T PF05686_consen 231 KYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKV----EWLNAHDDEAQRIAENGQRFAREYLTMED 306 (395)
T ss_pred HHHHcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHh----hhcccChHHHHHHHHHHHHHHHHHhhhhH
Confidence 3336666666653221 12223334455454554 3677877777 44568999999999999999988888888
Q ss_pred HHHHHHHHHHHhc
Q 003655 756 YSQRLLTLTGVYG 768 (805)
Q Consensus 756 ~a~rll~Ly~~~~ 768 (805)
+..=+..+...|+
T Consensus 307 ~~~Y~~~LL~eYa 319 (395)
T PF05686_consen 307 VYCYWRRLLLEYA 319 (395)
T ss_pred HHHHHHHHHHHHH
Confidence 8777777776654
No 205
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=49.46 E-value=16 Score=37.32 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=26.9
Q ss_pred ceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCC
Q 003655 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~ 339 (805)
|||+||+..|+.|- +++++..++||+|+ -++|..
T Consensus 1 mKIaiIgAsG~~Gs-------------------------~i~~EA~~RGHeVT----AivRn~ 34 (211)
T COG2910 1 MKIAIIGASGKAGS-------------------------RILKEALKRGHEVT----AIVRNA 34 (211)
T ss_pred CeEEEEecCchhHH-------------------------HHHHHHHhCCCeeE----EEEeCh
Confidence 79999998887431 56778899999999 887763
No 206
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=49.33 E-value=3.2e+02 Score=28.20 Aligned_cols=135 Identities=12% Similarity=0.030 Sum_probs=68.9
Q ss_pred HHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCC
Q 003655 591 WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 670 (805)
Q Consensus 591 A~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS 670 (805)
.+..+.+ -.+++.++..... +++.++++. ++|.|+.. ... ...+.+ +++++...
T Consensus 24 k~~~Ll~--~ga~VtVvsp~~~------------~~l~~l~~~----~~i~~~~~---~~~----~~dl~~-~~lVi~at 77 (205)
T TIGR01470 24 KARLLLK--AGAQLRVIAEELE------------SELTLLAEQ----GGITWLAR---CFD----ADILEG-AFLVIAAT 77 (205)
T ss_pred HHHHHHH--CCCEEEEEcCCCC------------HHHHHHHHc----CCEEEEeC---CCC----HHHhCC-cEEEEECC
Confidence 3344444 2456677765432 334444432 36788752 111 123443 66655433
Q ss_pred -CCCCCcHHHHHHHHcCCcEEEcCcccccccc-----ccCceEEEE-CCCCHHHHHHHHHHHHHHhhC-CHHHHHHHHHH
Q 003655 671 -LYEAFGLTVVEAMTCGLPTFATCKGGPAEII-----VNGKSGYHI-DPYHGEQAAEILVDFFEKCKA-DPSYWDKISLG 742 (805)
Q Consensus 671 -~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI-----~dg~~G~l~-~p~d~e~lA~aI~~~l~~l~~-dp~~~~~ms~~ 742 (805)
..|-.--..-+|-..|+||-+.+.....+++ ..|.--+-+ ..+....++..|.+-++.++. +-..+-++...
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~~~~~~~ 157 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLPPSLGDLATLAAT 157 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 2223334566777899999777665555544 333222222 233445677777766666553 22334445555
Q ss_pred HHHHHHHhC
Q 003655 743 GLKRIEEKY 751 (805)
Q Consensus 743 ar~~v~e~y 751 (805)
.|..+.+..
T Consensus 158 ~R~~~k~~~ 166 (205)
T TIGR01470 158 WRDAVKKRL 166 (205)
T ss_pred HHHHHHhhC
Confidence 666665443
No 207
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=48.35 E-value=2.9e+02 Score=29.79 Aligned_cols=39 Identities=15% Similarity=0.263 Sum_probs=26.5
Q ss_pred CCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCCC
Q 003655 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (805)
Q Consensus 274 p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~ 339 (805)
.|.|||++....|+..+ | +. .|++.|++.| +|. |+++..
T Consensus 3 ~~~M~ILltNDDGi~a~----------G----i~--------aL~~~l~~~g-~V~----VvAP~~ 41 (257)
T PRK13932 3 DKKPHILVCNDDGIEGE----------G----IH--------VLAASMKKIG-RVT----VVAPAE 41 (257)
T ss_pred CCCCEEEEECCCCCCCH----------H----HH--------HHHHHHHhCC-CEE----EEcCCC
Confidence 35689999998888432 2 33 4556677778 787 887653
No 208
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=47.69 E-value=1.8e+02 Score=32.85 Aligned_cols=159 Identities=13% Similarity=0.161 Sum_probs=101.2
Q ss_pred hhcccc-CCCCcEEEEEeeccCCCCH---HHHHHHHHHhHccCC-CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcC
Q 003655 561 HLCVLK-DRNKPILFTMARLDRVKNL---TGLVEWYGKNAKLRE-LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 561 ~lG~l~-~~~k~iIl~vGRL~~~Kgi---~~LleA~~~l~~~~~-~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~ 635 (805)
++|.-. .+.+.+=++=-+++-.|+- -+++|++-+. .| .+..+.|-..... .+-..+..++..+.
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~---~P~~v~~~~V~Nt~~~--------ke~~~F~~f~~~ld 248 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRA---DPDAVEHVYVTNTYHL--------KEHPTFVNFANSLD 248 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHh---ChhhcceEEEecchhh--------hcCHHHHHHHHhhH
Confidence 355522 2233344444456666764 2334433322 23 3556666654331 22345566666655
Q ss_pred C--CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC
Q 003655 636 L--NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 713 (805)
Q Consensus 636 L--~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~ 713 (805)
+ ++...|-| +. +++.++++-.|+.|.-.+.-+.-..-.||+--|=|.|-.. ..+. ..|+.++-.
T Consensus 249 lvr~gkasfeg----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~GYYY~~f 314 (364)
T PF10933_consen 249 LVRDGKASFEG----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DVGYYYPDF 314 (364)
T ss_pred HhhcCeeEEee----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--ccCcCCCCc
Confidence 5 57788888 43 4677777788999988887778888999999999998742 2332 379999988
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003655 714 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v 747 (805)
|..+=+++|.+++. +..+.++...+++++.+
T Consensus 315 D~~~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l 345 (364)
T PF10933_consen 315 DAFEGARQLLRAIR---EHDADLDAYRARARRLL 345 (364)
T ss_pred cHHHHHHHHHHHHH---HccccHHHHHHHHHHHH
Confidence 99999999988775 44555666666666655
No 209
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=46.90 E-value=89 Score=33.52 Aligned_cols=86 Identities=9% Similarity=0.001 Sum_probs=54.7
Q ss_pred HHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003655 679 VVEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHG-EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 754 (805)
Q Consensus 679 vlEAMA~GlPVVaT~~G---G~~EiI~dg~~G~l~~p~d~-e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~ 754 (805)
+-=-|+|+-.|+..... -.-+.+..+++=+-+.++.. +++.++|. -+.++|+..++|+++|++.+.+..+.+
T Consensus 161 l~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~----~~~~~~~~a~~Ia~~~~~~~~~~L~~~ 236 (256)
T smart00672 161 LKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVD----WGNEHDKKAQEIGKRGSEFIQQNLSME 236 (256)
T ss_pred HHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHH----HHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 33456666665554321 11222333444333443222 33777774 344899999999999999998889999
Q ss_pred HHHHHHHHHHHHhc
Q 003655 755 IYSQRLLTLTGVYG 768 (805)
Q Consensus 755 ~~a~rll~Ly~~~~ 768 (805)
.+..-+..+...|+
T Consensus 237 ~~~~Y~~~ll~eya 250 (256)
T smart00672 237 DVYDYMFHLLQEYA 250 (256)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888777664
No 210
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=43.22 E-value=3e+02 Score=32.88 Aligned_cols=155 Identities=12% Similarity=0.117 Sum_probs=97.7
Q ss_pred CCcEEEEEeecc-CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCC
Q 003655 569 NKPILFTMARLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 569 ~k~iIl~vGRL~-~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~ 647 (805)
.++.-+..|.-. -+||-+..++++.+.. .++-.|.+... ....++.-|.-+|
T Consensus 276 r~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~--------------------~~~~~P~~V~NHG--- 328 (559)
T PF15024_consen 276 RKNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQ--------------------RPPNVPSFVKNHG--- 328 (559)
T ss_pred ccceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCC--------------------CCcccchhhhhcC---
Confidence 344555566544 3677788888776543 24444433321 1112344566677
Q ss_pred CcCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCcccccc-----ccc-------------------
Q 003655 648 NRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAE-----IIV------------------- 702 (805)
Q Consensus 648 ~~v~~~el~~~ia~aaDvfV~PS~-~E~fGltvlEAMA~GlPVVaT~~GG~~E-----iI~------------------- 702 (805)
..+..|+..++.. +-+||---. +| |=+.+||+|.|+|.|-.....+.. ...
T Consensus 329 -~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 329 -ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred -cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 6778999999996 779885433 55 446899999999988875543321 110
Q ss_pred cCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003655 703 NGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 703 dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~~ 767 (805)
..-.-+.++-+|.+++-++|.+++. .+- .-++=-.||-+.+.+|+-.+.+.-
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~----~~v---------~Py~P~efT~egmLeRv~~~ie~q 456 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILA----TPV---------EPYLPYEFTCEGMLERVNALIEKQ 456 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHh----cCC---------CCcCCcccCHHHHHHHHHHHHHhh
Confidence 1123567888899999999977763 221 113335688899999988877654
No 211
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=41.59 E-value=4.1e+02 Score=28.31 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=22.5
Q ss_pred cCCCceEEEE--cC-C--------CchHHHHHHHHHcCCcEEEEecC
Q 003655 402 LQGKPDLIIG--NY-S--------DGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 402 l~~kPDlIh~--h~-~--------~~~lva~llar~lgip~v~t~H~ 437 (805)
+..+||+|.+ |. . -|..-|++-+...|+|-+-.-..
T Consensus 83 ~~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 83 MPEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred ccCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 3468999985 11 1 12345566667789998866553
No 212
>COG1647 Esterase/lipase [General function prediction only]
Probab=40.58 E-value=1.3e+02 Score=31.74 Aligned_cols=34 Identities=21% Similarity=0.159 Sum_probs=26.6
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
+-..|..+--+.|+.++..+|....++-++.+-+
T Consensus 83 gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a 116 (243)
T COG1647 83 GYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCA 116 (243)
T ss_pred CCCeEEEEeecchhHHHHHHHhhCCccceeeecC
Confidence 4566777888999999999999888776665544
No 213
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=38.04 E-value=4.4e+02 Score=26.65 Aligned_cols=36 Identities=19% Similarity=0.530 Sum_probs=25.1
Q ss_pred CCCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccc
Q 003655 273 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (805)
Q Consensus 273 ~p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~ 329 (805)
++|.|||.+-.+ |.. |-...++ .+++.|.+.|+.|.
T Consensus 2 ~~~~mki~ITG~------------PGv-GKtTl~~--------ki~e~L~~~g~kvg 37 (179)
T COG1618 2 IKMAMKIFITGR------------PGV-GKTTLVL--------KIAEKLREKGYKVG 37 (179)
T ss_pred CCcceEEEEeCC------------CCc-cHHHHHH--------HHHHHHHhcCceee
Confidence 578899977532 322 4445555 78888999998876
No 214
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=34.82 E-value=2.9e+02 Score=31.05 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=24.1
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H 436 (805)
+-.-+..+-.+.|+..|++.+.....|+....+
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 445677777888889999888877777655443
No 215
>PRK12342 hypothetical protein; Provisional
Probab=32.32 E-value=1.3e+02 Score=32.43 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=26.1
Q ss_pred CceEEEEcC--CC--chHHHHHHHHHcCCcEEEEecCC
Q 003655 405 KPDLIIGNY--SD--GNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 405 kPDlIh~h~--~~--~~lva~llar~lgip~v~t~H~l 438 (805)
.||+|.|-. .+ .+.++..+|..+|+|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 499999632 23 37899999999999998766543
No 216
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=32.19 E-value=1.7e+02 Score=27.97 Aligned_cols=101 Identities=21% Similarity=0.214 Sum_probs=49.4
Q ss_pred HHHHHHHHCCCccccceeEEeCCCCCCC-CCccccceeeecCccCeEEEEeccccCCcccccccccccchhhHHHHHHHH
Q 003655 316 EMLLRIKQQGLDITPQILIITRLLPDAV-GTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDV 394 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~~~~~-g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~~~l~~f~~~~ 394 (805)
|...+|.++|..++ .|.++|...++.. |...- ..+-....+..+|+.++.. ... ..--.-.+.|...+
T Consensus 9 Etl~aL~~~g~~i~-ev~lI~T~~~~v~~~~~~l-~~~l~~~~~~~~i~~i~~~-~~D--------I~t~~d~~~~~~~I 77 (124)
T TIGR03642 9 EAIDYLKKKGEPIS-DVILIYTKDPYVLSALRAL-KDSLLKKFYKAEVHKIPLK-FDD--------ILSDEDILTFMSIA 77 (124)
T ss_pred HHHHHHHhcCCCCC-eEEEEEcCCHHHHHHHHHH-HHHhHHhcCCcEEEEeccC-ccc--------cCCHHHHHHHHHHH
Confidence 67778899998865 6667775543321 10000 0000011123444444431 100 11112234555544
Q ss_pred HHHHHHHcCCCce--EEEEcCCCc----hHHHHHHHHHcC
Q 003655 395 AVEIAKELQGKPD--LIIGNYSDG----NIVASLLAHKLG 428 (805)
Q Consensus 395 ~~~i~~~l~~kPD--lIh~h~~~~----~lva~llar~lg 428 (805)
.+.+... ..+++ -+|.+-+.| ++.+.+++..+|
T Consensus 78 ~~~i~~l-~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 78 AKEVKKE-RENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHHH-hhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 4444443 34666 799888776 566666666665
No 217
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=31.97 E-value=84 Score=31.32 Aligned_cols=42 Identities=19% Similarity=0.391 Sum_probs=30.8
Q ss_pred HHHHHHHccCcEEEeCCC----CCCCcH--HHHHHHHcCCcEEEcCcc
Q 003655 654 ELYRYICDTKGAFVQPAL----YEAFGL--TVVEAMTCGLPTFATCKG 695 (805)
Q Consensus 654 el~~~ia~aaDvfV~PS~----~E~fGl--tvlEAMA~GlPVVaT~~G 695 (805)
.+.+.+.+.+|++|+.-+ .|+-|+ .+.+|++.|+||+++-..
T Consensus 85 ~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 85 ALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 345556666899998765 455565 488999999999997433
No 218
>COG4195 Phage-related replication protein [General function prediction only]
Probab=31.91 E-value=54 Score=33.35 Aligned_cols=62 Identities=26% Similarity=0.269 Sum_probs=36.7
Q ss_pred cHHHHHHHHHHHHHhhcCCCcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHH
Q 003655 243 TAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRI 321 (805)
Q Consensus 243 ~~~r~~~~~~~l~~~~~~p~~~~~~~f~~~~p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L 321 (805)
.+++.-....-|.+....-|+..+.. .+ .--+|+|++||| ||.+--+-|+||++.++-+-.|
T Consensus 7 ~~~d~y~~f~~Lse~esp~dy~ii~~--e~--~~S~v~ilapHG-------------G~IE~GvSELare~s~e~S~yl 68 (208)
T COG4195 7 SAEDEYSNFASLSENESPVDYGIIYT--EK--LGSRVLILAPHG-------------GGIEGGVSELAREFSDEYSGYL 68 (208)
T ss_pred CccccccCHHHHHhccCcccCCeEEe--ec--cCceEEEEeccC-------------CccCccHHHHHHHHHHHHHHHH
Confidence 34444444455555544323333221 01 024799999998 7888889999998877654443
No 219
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=31.33 E-value=6.2e+02 Score=27.18 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=21.6
Q ss_pred CCCceEEEE--cC----C-----CchHHHHHHHHHcCCcEEEEec
Q 003655 403 QGKPDLIIG--NY----S-----DGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 403 ~~kPDlIh~--h~----~-----~~~lva~llar~lgip~v~t~H 436 (805)
..+||+|.+ |. . .|..-|+.-+...|+|-+..-.
T Consensus 84 ~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 84 DKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred cCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 458999995 11 1 1234556666778999876554
No 220
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=31.32 E-value=6.3e+02 Score=27.14 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=22.0
Q ss_pred cCCCceEEEE--cC----C-----CchHHHHHHHHHcCCcEEEEec
Q 003655 402 LQGKPDLIIG--NY----S-----DGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 402 l~~kPDlIh~--h~----~-----~~~lva~llar~lgip~v~t~H 436 (805)
+..+||+|++ |. . -|...|++-+...|+|-+..-.
T Consensus 84 ~~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 84 VPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred cCCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 3468999995 11 1 1234566667778999876544
No 221
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=30.90 E-value=2.7e+02 Score=29.14 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=21.4
Q ss_pred CCceEEEEcCCC--chHHHHHHHHH-cCCcEEE-Eec
Q 003655 404 GKPDLIIGNYSD--GNIVASLLAHK-LGVTQCT-IAH 436 (805)
Q Consensus 404 ~kPDlIh~h~~~--~~lva~llar~-lgip~v~-t~H 436 (805)
...|++.+-... .|.++..++++ +|+|.++ .++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~ 101 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVIARAR 101 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEec
Confidence 578888854433 37777777765 8988664 444
No 222
>PRK09213 pur operon repressor; Provisional
Probab=30.40 E-value=4.7e+02 Score=28.41 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=28.8
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003655 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 404 ~kPDlIh~h~~~~~lva~llar~lgip~v~t~H 436 (805)
.++|.|.+-...|-.+|..+|..+++|+++.=.
T Consensus 129 ~~iD~Vvtvet~GIplA~~vA~~L~vp~vivRK 161 (271)
T PRK09213 129 KKIDAVMTVETKGIPLAYAVANYLNVPFVIVRR 161 (271)
T ss_pred cCCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 369999999888888999999999999887655
No 223
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=30.07 E-value=1.7e+02 Score=31.40 Aligned_cols=33 Identities=24% Similarity=0.219 Sum_probs=25.4
Q ss_pred CceEEEEc--CCC--chHHHHHHHHHcCCcEEEEecC
Q 003655 405 KPDLIIGN--YSD--GNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 405 kPDlIh~h--~~~--~~lva~llar~lgip~v~t~H~ 437 (805)
.||+|.|- ..+ .+.++..+|..+|+|++..+-.
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 59999962 223 4789999999999998876654
No 224
>PLN00016 RNA-binding protein; Provisional
Probab=29.71 E-value=48 Score=37.23 Aligned_cols=20 Identities=20% Similarity=0.287 Sum_probs=16.4
Q ss_pred HHHHHHHHCCCccccceeEEeCCC
Q 003655 316 EMLLRIKQQGLDITPQILIITRLL 339 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~ 339 (805)
.|++.|.++||+|+ ++++..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 56677899999999 888764
No 225
>PLN03228 methylthioalkylmalate synthase; Provisional
Probab=29.68 E-value=9.8e+02 Score=28.40 Aligned_cols=110 Identities=17% Similarity=0.303 Sum_probs=65.6
Q ss_pred ceeeeeccccccCCCCCCCCCCCCchhhhhhHhhhhhhcCCCC-C---cchH----HHHHhhcccCCeeeecccC-CCCH
Q 003655 131 FVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKE-S---MHPL----LEFLRVHCHKGKNMMLNDR-IQNL 201 (805)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~----~~~~~~~~~~~~~~~~~~~-~~~~ 201 (805)
.+.--.+=||-.++|.++..+.-|+ +=|-+--+|.++++.+ + ..|+ -+|+-.--.+-+.+.|.|. +.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~I~DtTLRDG 95 (503)
T PLN03228 18 TVVGRSVLPIGSSLPSLRLTRPYGK--PTLFRSCCSSESKKVATSATDLKPIVERWPEYIPNKLPDKNYVRVLDTTLRDG 95 (503)
T ss_pred ceEEEeeeecccCCCcccccCCCCC--ccHHHHHHHHhhhccccccccccchhhcccccCCcccCCCCCeEEEeCCCCCC
Confidence 3444467799999999999988776 4566777888887763 2 4333 3444433333444444443 4444
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCc-----hHHHHHhhhcCc---ccCcCCcHHHHHHHHHHHHHh
Q 003655 202 NSLQHVLRKAEEYLTTVVPETPF-----SELALRFQEIGL---ERGWGDTAERALEMIQLLLDL 257 (805)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~gw~~~~~r~~~~~~~l~~~ 257 (805)
.| .+..+| -++...|.++|+ |-||-..-....+.++.+...
T Consensus 96 eQ---------------~~gv~fs~eeKi~Ia~~L~~~GVd~IEvG~Pa~s~~e~e~i~~i~~~ 144 (503)
T PLN03228 96 EQ---------------SPGGSLTPPQKLEIARQLAKLRVDIMEVGFPGSSEEEFEAVKTIAKT 144 (503)
T ss_pred CC---------------CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh
Confidence 32 122222 245667888887 778866655556666555443
No 226
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=29.37 E-value=31 Score=28.51 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=26.6
Q ss_pred ccccccchHHHH---HHHHHHhHHHHHHHHHHHHhcCCC
Q 003655 5 ALTRVHSLRERL---DETLSAHRNEILALLSRIEGKGKG 40 (805)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 40 (805)
.+.|+++|...+ +....-...+|.+||.+.+++||=
T Consensus 13 ~l~RIh~mLkmf~~~~~~~~~s~~eL~~fL~~lv~e~~L 51 (60)
T PF08672_consen 13 PLDRIHSMLKMFPKDPGGYDISLEELQEFLDRLVEEGKL 51 (60)
T ss_dssp EHHHHHHHHHHH-GGG--TT--HHHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHCCcE
Confidence 578999998888 344466778999999999998873
No 227
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=28.95 E-value=2.9e+02 Score=29.67 Aligned_cols=53 Identities=17% Similarity=0.006 Sum_probs=31.1
Q ss_pred CcEEEeCCCCC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHH
Q 003655 663 KGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILV 723 (805)
Q Consensus 663 aDvfV~PS~~E--~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~ 723 (805)
+|++|.=-.-+ ++--++--|+.+|+|||.-+.+-... + +-.+ .+.+++.+.+.
T Consensus 198 i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~----~--~~~~--~~~~el~~~l~ 252 (256)
T TIGR00715 198 IDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP----G--VAIF--DDISQLNQFVA 252 (256)
T ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----C--CccC--CCHHHHHHHHH
Confidence 45555432222 45567888999999999987764311 1 0112 36777666664
No 228
>PRK06988 putative formyltransferase; Provisional
Probab=28.50 E-value=2.8e+02 Score=30.61 Aligned_cols=14 Identities=21% Similarity=0.446 Sum_probs=9.6
Q ss_pred HHHHHHHHCCCccc
Q 003655 316 EMLLRIKQQGLDIT 329 (805)
Q Consensus 316 eLa~~L~~~Gh~V~ 329 (805)
...+.|.+.|++|.
T Consensus 16 ~~L~~L~~~~~~i~ 29 (312)
T PRK06988 16 RCLQVLLARGVDVA 29 (312)
T ss_pred HHHHHHHhCCCCEE
Confidence 34456777898876
No 229
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=28.35 E-value=4.6e+02 Score=26.69 Aligned_cols=31 Identities=26% Similarity=0.367 Sum_probs=23.7
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003655 408 LIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 408 lIh~h~~~~~lva~llar~lgip~v~t~H~l 438 (805)
++..-.+.|++.|..++.+.++|.|.+-=++
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 5555567788999999999999987665443
No 230
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=28.34 E-value=5e+02 Score=29.01 Aligned_cols=44 Identities=14% Similarity=0.130 Sum_probs=26.4
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeC
Q 003655 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGG 609 (805)
Q Consensus 561 ~lG~l~~~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~ 609 (805)
.+|+ ...+.-++.+|.- ..||.+...+|+..+++..++ |-+.|.
T Consensus 169 ~~Gi--~~PrVAlLn~Gse-~~kg~~~~~eA~~Ll~~~~~~--l~f~G~ 212 (334)
T PRK05331 169 VLGI--ENPRVGLLNIGEE-EIKGNELVKEAYELLKAADSS--INFIGN 212 (334)
T ss_pred HcCC--CCCeEEEEeCCCC-CCCCCHHHHHHHHHHHccCCC--ceEEee
Confidence 3566 3333335555443 468888888888888654343 456664
No 231
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=27.62 E-value=8e+02 Score=26.43 Aligned_cols=122 Identities=11% Similarity=0.099 Sum_probs=74.8
Q ss_pred CCcEEEEEeeccC--CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCC
Q 003655 569 NKPILFTMARLDR--VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 569 ~k~iIl~vGRL~~--~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~ 646 (805)
+.|++ .|+-..+ ..|++.+++.++.. .+.=+++=|-|. ++.+++.+.++++|+. .|.++...
T Consensus 91 ~~p~v-lm~Y~N~i~~~G~e~F~~~~~~a-----GvdgviipDLP~---------ee~~~~~~~~~~~gi~-~I~lv~Pt 154 (263)
T CHL00200 91 KAPIV-IFTYYNPVLHYGINKFIKKISQA-----GVKGLIIPDLPY---------EESDYLISVCNLYNIE-LILLIAPT 154 (263)
T ss_pred CCCEE-EEecccHHHHhCHHHHHHHHHHc-----CCeEEEecCCCH---------HHHHHHHHHHHHcCCC-EEEEECCC
Confidence 44543 7776654 55999999888765 466778877765 4567888999999984 57887733
Q ss_pred CCcCChHHHHHHHHccCcEEEeC-CCCC------CCcHHHHHHH-----HcCCcEEEcCcccc-c----cccccCceEEE
Q 003655 647 MNRVRNGELYRYICDTKGAFVQP-ALYE------AFGLTVVEAM-----TCGLPTFATCKGGP-A----EIIVNGKSGYH 709 (805)
Q Consensus 647 ~~~v~~~el~~~ia~aaDvfV~P-S~~E------~fGltvlEAM-----A~GlPVVaT~~GG~-~----EiI~dg~~G~l 709 (805)
+ ..+..+.+++.++-||.- |..- ..+-.+-|.. .+++|+.+ ..|-- + ++...|..|++
T Consensus 155 T----~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v-GFGI~~~e~~~~~~~~GADGvV 229 (263)
T CHL00200 155 S----SKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIIL-GFGISTSEQIKQIKGWNINGIV 229 (263)
T ss_pred C----CHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEE-ECCcCCHHHHHHHHhcCCCEEE
Confidence 3 344554455457744432 2311 2333344444 67899987 33322 2 23444578888
Q ss_pred EC
Q 003655 710 ID 711 (805)
Q Consensus 710 ~~ 711 (805)
+-
T Consensus 230 VG 231 (263)
T CHL00200 230 IG 231 (263)
T ss_pred EC
Confidence 84
No 232
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=27.52 E-value=3.3e+02 Score=28.88 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=21.3
Q ss_pred CCCceEEEE--cCCCchHHHHHHHHHcCCcEEEEec
Q 003655 403 QGKPDLIIG--NYSDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 403 ~~kPDlIh~--h~~~~~lva~llar~lgip~v~t~H 436 (805)
...+|.|.. ....+.-+...+-+.+|+|++..-.
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 346887773 3333344555666789999876444
No 233
>PRK04531 acetylglutamate kinase; Provisional
Probab=26.61 E-value=1.7e+02 Score=33.47 Aligned_cols=73 Identities=12% Similarity=0.091 Sum_probs=42.6
Q ss_pred CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEE-eCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCC
Q 003655 568 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV-GGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 568 ~~k~iIl~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIV-G~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~ 646 (805)
+.+..++-+|.=.-..+++.+++.++.+... ..++||| |+|+ .+.++.++.|+..+.. -|.
T Consensus 35 ~~~~~VIKiGG~~l~~~~~~l~~dla~L~~~--G~~~VlVHGggp--------------qI~~~l~~~gie~~~v-~G~- 96 (398)
T PRK04531 35 AERFAVIKVGGAVLRDDLEALASSLSFLQEV--GLTPIVVHGAGP--------------QLDAELDAAGIEKETV-NGL- 96 (398)
T ss_pred CCcEEEEEEChHHhhcCHHHHHHHHHHHHHC--CCcEEEEECCCH--------------HHHHHHHHcCCCcEEE-CCE-
Confidence 4466677776522223578888888887765 3455555 5553 4567778888865432 221
Q ss_pred CCcCChHHHHHHHH
Q 003655 647 MNRVRNGELYRYIC 660 (805)
Q Consensus 647 ~~~v~~~el~~~ia 660 (805)
++..++..+...
T Consensus 97 --RVTd~~tl~vv~ 108 (398)
T PRK04531 97 --RVTSPEALAIVR 108 (398)
T ss_pred --ecCCHHHHHHHH
Confidence 444455555444
No 234
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=26.15 E-value=1.4e+02 Score=30.70 Aligned_cols=50 Identities=28% Similarity=0.377 Sum_probs=37.5
Q ss_pred chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003655 383 VWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (805)
Q Consensus 383 i~~~l~~f~~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~ 433 (805)
.|..+......+...+.+. +.+||+|++-.-.|-..|.+++..++++-+.
T Consensus 8 Sw~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l~ 57 (192)
T COG2236 8 SWEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPLY 57 (192)
T ss_pred cHHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCceE
Confidence 3555666666666666643 5789999999888888999999999985443
No 235
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=24.94 E-value=4.1e+02 Score=27.77 Aligned_cols=124 Identities=15% Similarity=0.098 Sum_probs=62.9
Q ss_pred CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcC-CCCcEE-Ee-cCCCCcCChHHHHHH
Q 003655 582 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK-LNGQFR-WI-SSQMNRVRNGELYRY 658 (805)
Q Consensus 582 ~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~-L~~~V~-fl-G~~~~~v~~~el~~~ 658 (805)
.+|++....-.+... ....+.|+|.|.+.. .+ .+-.++.+.+.+.| +- |. |. +....+.....--++
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld~~--yp---~~n~~l~~~i~~~ggll--iSe~p~~~~~~~~~f~~RNri 151 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLDQI--YP---RQNSKLAAKIAENGGLL--LSEYPPDTKPIKYNFPKRNRI 151 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCccC--Cc---hhhHHHHHHHHHcCCEE--EEecCCCCCCCcccHHHHHHH
Confidence 679988777665432 235677778776510 01 11233333333333 10 00 00 111111111233344
Q ss_pred HHccCcEEEeCCCCCCCc--HHHHHHHHcCCcEEEcC-------ccccccccccCceEEEECCCCHHHHH
Q 003655 659 ICDTKGAFVQPALYEAFG--LTVVEAMTCGLPTFATC-------KGGPAEIIVNGKSGYHIDPYHGEQAA 719 (805)
Q Consensus 659 ia~aaDvfV~PS~~E~fG--ltvlEAMA~GlPVVaT~-------~GG~~EiI~dg~~G~l~~p~d~e~lA 719 (805)
++..++..|...-.+..| .++-.|+..|+||+|-. ..|...+|.+|- ..+. +.+++.
T Consensus 152 ia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~GA-~~i~---~~~d~~ 217 (220)
T TIGR00732 152 ISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQGA-ALIT---SAKDIL 217 (220)
T ss_pred HHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCCC-EEEC---CHHHHH
Confidence 444455555544434445 56788999999999962 246778888873 3333 455543
No 236
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=24.84 E-value=4.8e+02 Score=27.12 Aligned_cols=104 Identities=17% Similarity=0.126 Sum_probs=59.4
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCC-cEEEecC-CCCcCChHHHHH
Q 003655 580 DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG-QFRWISS-QMNRVRNGELYR 657 (805)
Q Consensus 580 ~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~-~V~flG~-~~~~v~~~el~~ 657 (805)
+-.|=...|..|+.-+.... .-++++||..+. ..+.+++.++..|..- +=+|+|- -+|+ .+-.
T Consensus 47 dL~kT~~~L~~A~~~i~~~~-~~~ILfVgTk~~----------~~~~v~k~A~~~g~~~v~~RWlgG~LTN~----~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRYE-PEKILVVSSRQY----------GQKPVQKFAEVVGAKAITGRFIPGTLTNP----SLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHhc-CCeEEEEeCCHH----------HHHHHHHHHHHhCCeeecCccCCCcCcCc----chhc
Confidence 44555666777776665543 457888998753 2234555555554321 1268872 2332 2222
Q ss_pred HHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-Ccccccccc
Q 003655 658 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEII 701 (805)
Q Consensus 658 ~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT-~~GG~~EiI 701 (805)
++ -=|+.+...- -.-..++.||.-.|.|||+- |....++.|
T Consensus 112 ~~--~Pdliiv~dp-~~~~~AI~EA~kl~IP~IaivDTn~dp~~V 153 (204)
T PRK04020 112 YI--EPDVVVVTDP-RGDAQAVKEAIEVGIPVVALCDTDNLTSNV 153 (204)
T ss_pred cC--CCCEEEEECC-cccHHHHHHHHHhCCCEEEEEeCCCCcccC
Confidence 21 1344443322 12266899999999999994 666666665
No 237
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=24.69 E-value=1.8e+02 Score=30.09 Aligned_cols=104 Identities=15% Similarity=0.077 Sum_probs=59.3
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCC-cEEEecC-CCCcCChHHHHH
Q 003655 580 DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG-QFRWISS-QMNRVRNGELYR 657 (805)
Q Consensus 580 ~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~-~V~flG~-~~~~v~~~el~~ 657 (805)
+-.|=...|.+|+.-+.... .-++++||..+. ....+++.++..|-.. +=+|+|- -+|+...
T Consensus 41 dL~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~----------~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~~~----- 104 (196)
T TIGR01012 41 DLRKTDERLRVAAKFLVRIE-PEDILVVSARIY----------GQKPVLKFAKVTGARAIAGRFTPGTFTNPMQK----- 104 (196)
T ss_pred cHHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH----------HHHHHHHHHHHhCCceECCeeCCCCCCCcccc-----
Confidence 44455566666766655544 458999998753 1233455555544321 2278873 3333211
Q ss_pred HHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-Ccccccccc
Q 003655 658 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEII 701 (805)
Q Consensus 658 ~ia~aaDvfV~PS~~E~fGltvlEAMA~GlPVVaT-~~GG~~EiI 701 (805)
.+. --|+.+...- -.-..++.||...|.|||+- |....++.|
T Consensus 105 ~~~-~Pdlliv~dp-~~~~~Av~EA~~l~IP~Iai~DTn~dp~~v 147 (196)
T TIGR01012 105 AFR-EPEVVVVTDP-RADHQALKEASEVGIPIVALCDTDNPLRYV 147 (196)
T ss_pred ccC-CCCEEEEECC-ccccHHHHHHHHcCCCEEEEeeCCCCCccC
Confidence 122 2445444322 22345799999999999994 666666666
No 238
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=24.52 E-value=9.1e+02 Score=26.04 Aligned_cols=111 Identities=14% Similarity=0.043 Sum_probs=68.3
Q ss_pred EEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCC--C-CCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCc
Q 003655 573 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR--K-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 573 Il~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~--~-~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~ 649 (805)
++.++......+.+.+++.++++++.+ +.++..|...+ + .+.+.--.+..+.+++..+++|+.=-.....
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g--~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~d----- 100 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELG--VHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVMD----- 100 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcC--CCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeCC-----
Confidence 444555566778999999999999864 56777774322 1 1223222455677888889988743222222
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHH-HHHHcCCcEEEcCc
Q 003655 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVV-EAMTCGLPTFATCK 694 (805)
Q Consensus 650 v~~~el~~~ia~aaDvfV~PS~~E~fGltvl-EAMA~GlPVVaT~~ 694 (805)
.+-..++.+..|++-.+|. +..-..++ ++-..|+||+.++.
T Consensus 101 ---~~~~~~l~~~vd~~kIga~-~~~n~~LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 101 ---TRDVEEVADYADMLQIGSR-NMQNFELLKEVGKTKKPILLKRG 142 (266)
T ss_pred ---hhhHHHHHHhCCEEEECcc-cccCHHHHHHHhcCCCcEEEeCC
Confidence 2334444445789999987 33333344 44467999999744
No 239
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=24.09 E-value=9.4e+02 Score=28.25 Aligned_cols=108 Identities=14% Similarity=0.167 Sum_probs=72.1
Q ss_pred eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHcc-CcEEEeCCC-CCCCcHHH
Q 003655 602 VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT-KGAFVQPAL-YEAFGLTV 679 (805)
Q Consensus 602 v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~a-aDvfV~PS~-~E~fGltv 679 (805)
.++++|-|.. ....-+.+.....|. .|+... +..+....+... .|+++.=-+ -+.-|+.+
T Consensus 5 ~~iLvVDDd~----------~ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~l 66 (464)
T COG2204 5 ARILVVDDDP----------DIRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLEL 66 (464)
T ss_pred CCEEEEeCCH----------HHHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHHH
Confidence 3567777664 233445555555553 344443 346777777764 356665333 46678998
Q ss_pred HHHHHc---CCcEEE-cCccccc---cccccCceEEEECCCCHHHHHHHHHHHHH
Q 003655 680 VEAMTC---GLPTFA-TCKGGPA---EIIVNGKSGYHIDPYHGEQAAEILVDFFE 727 (805)
Q Consensus 680 lEAMA~---GlPVVa-T~~GG~~---EiI~dg~~G~l~~p~d~e~lA~aI~~~l~ 727 (805)
++.+.. ++|||. |.+|.+. +-+..|-.-|+..|-+++.+...+.+.++
T Consensus 67 l~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 67 LKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 887765 699988 6777754 44556778899999999999999988774
No 240
>PLN02670 transferase, transferring glycosyl groups
Probab=24.08 E-value=6.2e+02 Score=29.74 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=49.9
Q ss_pred HHHHHHHHCCCccccceeEEeCCCCCCCCCccccceeeecCccCeEEEEeccccCCcccccccccccc----hhhHHHHH
Q 003655 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEV----WPYLETYT 391 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i----~~~l~~f~ 391 (805)
+|++.|+.+|+.|+ +++.......-. .... ....+++++.+|+-...|.-..--+..++ +.++....
T Consensus 25 ~LAk~La~~G~~vT----~v~t~~n~~~~~----~~~~-~~~~~i~~~~lp~p~~dglp~~~~~~~~~~~~~~~~~~~~~ 95 (472)
T PLN02670 25 RLSKLLAQKGHKIS----FISTPRNLHRLP----KIPS-QLSSSITLVSFPLPSVPGLPSSAESSTDVPYTKQQLLKKAF 95 (472)
T ss_pred HHHHHHHhCCCEEE----EEeCCchHHhhh----hccc-cCCCCeeEEECCCCccCCCCCCcccccccchhhHHHHHHHH
Confidence 67778899999999 877653211000 0000 01124778888753222211000000111 12222222
Q ss_pred ---HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003655 392 ---EDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (805)
Q Consensus 392 ---~~~~~~i~~~l~~kPDlIh~h~~~~~lva~llar~lgip~v~ 433 (805)
....+.+++. .+|+.|++.... ..+.-.|+++|||.++
T Consensus 96 ~~~~~~~~~~l~~--~~~~cvI~D~f~--~wa~~vA~~~gIP~~~ 136 (472)
T PLN02670 96 DLLEPPLTTFLET--SKPDWIIYDYAS--HWLPSIAAELGISKAF 136 (472)
T ss_pred HHhHHHHHHHHHh--CCCcEEEECCcc--hhHHHHHHHcCCCEEE
Confidence 2223333333 257877765433 3456678889999653
No 241
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.01 E-value=3.9e+02 Score=28.46 Aligned_cols=90 Identities=16% Similarity=0.112 Sum_probs=57.0
Q ss_pred HHHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCH
Q 003655 655 LYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADP 733 (805)
Q Consensus 655 l~~~ia~aaDvfV~PS-~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~dp 733 (805)
-..-+.+ ||++|.-- -+|+|=-.+++.+ .+.++++...++..+- .....-+..+|.+...+++.|.+.+.+ .||
T Consensus 46 d~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L~~--~dP 120 (264)
T cd01020 46 DAAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADALVK--ADP 120 (264)
T ss_pred HHHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHHHH--hCc
Confidence 3444554 88888754 3566555666655 4556666544332110 011334677899999999999998844 688
Q ss_pred HHHHHHHHHHHHHHHH
Q 003655 734 SYWDKISLGGLKRIEE 749 (805)
Q Consensus 734 ~~~~~ms~~ar~~v~e 749 (805)
+......+|+.+...+
T Consensus 121 ~~~~~y~~N~~~~~~~ 136 (264)
T cd01020 121 DNKKYYQANAKKFVAS 136 (264)
T ss_pred ccHHHHHHHHHHHHHH
Confidence 8877787888777643
No 242
>TIGR01568 A_thal_3678 uncharacterized plant-specific domain TIGR01568. This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.
Probab=23.69 E-value=1.3e+02 Score=25.59 Aligned_cols=50 Identities=18% Similarity=0.341 Sum_probs=35.2
Q ss_pred CCCCchHHHHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCCCcc--cHhHHh
Q 003655 220 PETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPC--TLETFL 270 (805)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p~~~--~~~~f~ 270 (805)
...||.+|+.-+++|=-|.|-+.+-+.+.|-+.-+.. +++|+.. .+.+|.
T Consensus 7 S~DPy~DFr~SM~EMI~~~~i~~~w~~LeeLL~cYL~-LN~~~~H~~Iv~AF~ 58 (66)
T TIGR01568 7 SDDPYEDFRRSMEEMIEERELEADWKELEELLACYLD-LNPKKSHRFIVRAFV 58 (66)
T ss_pred CCChHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-hCCchhhhHHHHHHH
Confidence 5679999999999998888866554566666655554 5666633 466665
No 243
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=23.54 E-value=7.6e+02 Score=24.77 Aligned_cols=109 Identities=9% Similarity=0.124 Sum_probs=64.1
Q ss_pred eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHc-cCcEEEeCCCCCC----Cc
Q 003655 602 VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEA----FG 676 (805)
Q Consensus 602 v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~-aaDvfV~PS~~E~----fG 676 (805)
.+++|+.+.+. ....+....+..+ .+...+. ..+..+....+.. ..|++++-....+ .|
T Consensus 4 ~~Ilivdd~~~----------~~~~l~~~L~~~~---~~~~v~~---~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g 67 (216)
T PRK10840 4 MNVIIADDHPI----------VLFGIRKSLEQIE---WVNVVGE---FEDSTALINNLPKLDAHVLITDLSMPGDKYGDG 67 (216)
T ss_pred eEEEEECCcHH----------HHHHHHHHHhcCC---CCEEEEE---ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCCH
Confidence 56777777642 2334445554332 2222221 1223455555542 3688887544332 57
Q ss_pred HHHHHHHH---cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 003655 677 LTVVEAMT---CGLPTFA-TCKGGP---AEIIVNGKSGYHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 677 ltvlEAMA---~GlPVVa-T~~GG~---~EiI~dg~~G~l~~p~d~e~lA~aI~~~l 726 (805)
+.+++.+. .++|+|+ |..... .+.+..|..||+..|.+++++.++|....
T Consensus 68 ~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 68 ITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred HHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 77777764 3467776 433332 24466789999999999999999987654
No 244
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=23.53 E-value=71 Score=36.26 Aligned_cols=52 Identities=15% Similarity=0.352 Sum_probs=36.7
Q ss_pred cCCCcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCC
Q 003655 259 EAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (805)
Q Consensus 259 ~~p~~~~~~~f~~~~p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~ 338 (805)
.+|.+..-..|-+..+..++|+|+...|+.| . .+++.|.++|++|. +++|.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~IG--------------~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGYIG--------------K-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcHHH--------------H-----------HHHHHHHHCCCEEE----EEEec
Confidence 3556666777777777788988886555432 2 45667888999988 88775
Q ss_pred C
Q 003655 339 L 339 (805)
Q Consensus 339 ~ 339 (805)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 3
No 245
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.13 E-value=1.2e+03 Score=26.94 Aligned_cols=176 Identities=11% Similarity=0.068 Sum_probs=104.3
Q ss_pred EEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCCh
Q 003655 573 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRN 652 (805)
Q Consensus 573 Il~vGRL~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~ 652 (805)
|=+.|..+..+-.....+...+.++ +++.++||-.... ...|.+..++|.+..+..+ +++|.|.=--+--...
T Consensus 157 iP~ygsyte~dpv~ia~egv~~fKk--e~fdvIIvDTSGR----h~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasiGQaa 229 (483)
T KOG0780|consen 157 VPFYGSYTEADPVKIASEGVDRFKK--ENFDVIIVDTSGR----HKQEASLFEEMKQVSKAIK-PDEIIFVMDASIGQAA 229 (483)
T ss_pred CeeEecccccchHHHHHHHHHHHHh--cCCcEEEEeCCCc----hhhhHHHHHHHHHHHhhcC-CCeEEEEEeccccHhH
Confidence 4466777888888889999998887 4677888865322 2455677788888888877 6778776311101223
Q ss_pred HHHHHHHHccCcE--EEeCCC----CCCCcHHHHHHHHcCCcEEEcCccccccccccCc----eEEEECCCCHHHHHHHH
Q 003655 653 GELYRYICDTKGA--FVQPAL----YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK----SGYHIDPYHGEQAAEIL 722 (805)
Q Consensus 653 ~el~~~ia~aaDv--fV~PS~----~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~----~G~l~~p~d~e~lA~aI 722 (805)
.+..+.+..+.|+ .+++-. .-|-.++.++ |.++||+---+|-.-|-.+.-. .+-+..-+|.+.+.+++
T Consensus 230 e~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glvek~ 307 (483)
T KOG0780|consen 230 EAQARAFKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLVEKV 307 (483)
T ss_pred HHHHHHHHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHHHHHHhccccHHHHHHHH
Confidence 3444445444443 333332 1223344444 5789998776664443332210 12233346777888877
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003655 723 VDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 723 ~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~~a~rll~Ly~~ 766 (805)
.+.. ...++++.+++. .-+||...+.+++-++.+.
T Consensus 308 ~ev~--~~d~~el~~kl~-------~gkFtlrd~y~Qfq~imkm 342 (483)
T KOG0780|consen 308 QEVG--KDDAKELVEKLK-------QGKFTLRDFYDQFQNIMKM 342 (483)
T ss_pred HHHh--hhhHHHHHHHHH-------hCCccHHHHHHHHHHHHhh
Confidence 6654 123334333322 2479999999999888766
No 246
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=22.34 E-value=1.2e+03 Score=27.41 Aligned_cols=62 Identities=15% Similarity=0.123 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHH--HcCCcEEE
Q 003655 622 AEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAM--TCGLPTFA 691 (805)
Q Consensus 622 ~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~~E~fGltvlEAM--A~GlPVVa 691 (805)
....+++.+.+.+|+.-++.|.+ ..+.+++.+. .+ +++-|+++.. +|....+.| -+|.|.+.
T Consensus 175 ~D~~elkrlL~~lGi~vn~v~p~----g~s~~dl~~l-~~-A~~NIv~~~~--~g~~~A~~Le~~fGiP~i~ 238 (511)
T TIGR01278 175 HDLIELRRLLKTLGIEVNVVAPW----GASIADLARL-PA-AWLNICPYRE--IGLMAAEYLKEKFGQPYIT 238 (511)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCC----CCCHHHHHhc-cc-CcEEEEechH--HHHHHHHHHHHHhCCCccc
Confidence 34578899999999988888876 4556777774 43 6677776442 566777777 67999874
No 247
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.15 E-value=79 Score=29.50 Aligned_cols=33 Identities=36% Similarity=0.698 Sum_probs=27.0
Q ss_pred HhhhcCcccCc----CCcHHHHHHHHHHHHHhhcCCC
Q 003655 230 RFQEIGLERGW----GDTAERALEMIQLLLDLLEAPD 262 (805)
Q Consensus 230 ~~~~~~~~~gw----~~~~~r~~~~~~~l~~~~~~p~ 262 (805)
+||+|||.--| |.+|+-+-|++....|-+.+|.
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~N 61 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAPN 61 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHccC
Confidence 69999999999 7789999999987776665543
No 248
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=21.73 E-value=9.5e+02 Score=25.53 Aligned_cols=37 Identities=22% Similarity=0.239 Sum_probs=29.2
Q ss_pred cEEEeCCCCCCCcHHHHHHHHcCCcEEEc-Ccccccccc
Q 003655 664 GAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEII 701 (805)
Q Consensus 664 DvfV~PS~~E~fGltvlEAMA~GlPVVaT-~~GG~~EiI 701 (805)
|+.|.-...|... +++||.-++.|+|+- |....++.|
T Consensus 175 D~vvvln~~e~~s-AilEA~K~~IPTIgIVDtN~~P~li 212 (251)
T KOG0832|consen 175 DLVVVLNPEENHS-AILEAAKMAIPTIGIVDTNCNPELI 212 (251)
T ss_pred ceeEecCcccccH-HHHHHHHhCCCeEEEecCCCCccce
Confidence 7778777767665 899999999999995 555566666
No 249
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=21.56 E-value=1.3e+03 Score=26.72 Aligned_cols=127 Identities=9% Similarity=0.033 Sum_probs=74.8
Q ss_pred eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC-CCC-CcHH-
Q 003655 602 VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEA-FGLT- 678 (805)
Q Consensus 602 v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia~aaDvfV~PS~-~E~-fGlt- 678 (805)
-++.|+... .++-.+++++++. . .++.+++..++.+ +|+++..+- .++ .+..
T Consensus 203 ~~i~IaNRT-------------~erA~~La~~~~~--~---------~~~l~el~~~l~~-~DvVissTsa~~~ii~~~~ 257 (414)
T COG0373 203 KKITIANRT-------------LERAEELAKKLGA--E---------AVALEELLEALAE-ADVVISSTSAPHPIITREM 257 (414)
T ss_pred CEEEEEcCC-------------HHHHHHHHHHhCC--e---------eecHHHHHHhhhh-CCEEEEecCCCccccCHHH
Confidence 466666655 3567788888871 1 4556799999997 998887533 222 3333
Q ss_pred HHHHHHcCCcEEEcCccccccccccC--c-eEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003655 679 VVEAMTCGLPTFATCKGGPAEIIVNG--K-SGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 679 vlEAMA~GlPVVaT~~GG~~EiI~dg--~-~G~l~~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~e~ysw~~ 755 (805)
+-+|+..-...+.-|.+-|+++=.+- . +-+++ |.|++..... .|-..|++..+.+...+. .
T Consensus 258 ve~a~~~r~~~livDiavPRdie~~v~~l~~v~l~---~iDDL~~iv~-------~n~~~R~~~~~~ae~iIe------e 321 (414)
T COG0373 258 VERALKIRKRLLIVDIAVPRDVEPEVGELPNVFLY---TIDDLEEIVE-------ENLEARKEEAAKAEAIIE------E 321 (414)
T ss_pred HHHHHhcccCeEEEEecCCCCCCccccCcCCeEEE---ehhhHHHHHH-------HhHHHHHHHHHHHHHHHH------H
Confidence 33444544556888998888765331 1 22455 4566555442 345566776676666663 3
Q ss_pred HHHHHHHHHHHhch
Q 003655 756 YSQRLLTLTGVYGF 769 (805)
Q Consensus 756 ~a~rll~Ly~~~~~ 769 (805)
-+++++..++....
T Consensus 322 e~~~~~~~l~~~~~ 335 (414)
T COG0373 322 ELAEFMEWLKKLEV 335 (414)
T ss_pred HHHHHHHHHHHhhc
Confidence 34444444444433
No 250
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=21.53 E-value=83 Score=38.45 Aligned_cols=43 Identities=35% Similarity=0.623 Sum_probs=28.0
Q ss_pred CCCcceEEEEcccccccccCcCCCCCcccccchhHHHHHHHHHHHHHHHHHCCCccccceeEEeCC
Q 003655 273 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (805)
Q Consensus 273 ~p~~~rI~iis~h~~~~~~~~lg~pdtGG~~vyvld~araL~~eLa~~L~~~Gh~V~~~I~VvT~~ 338 (805)
.|..+||+++|||- ..+++| .||. ..+|.++||+|+ |+++|..
T Consensus 366 ~~~~~rvLv~spHP---DDevi~---~GGT---------------larl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 366 LPYPKRVIIFSPHP---DDDVIS---MGGT---------------FRRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred ccCCceEEEEEeCC---CchHhh---hHHH---------------HHHHHHCCCcEE--EEEecCC
Confidence 35679999999994 223443 2443 235789999999 4455544
No 251
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=21.24 E-value=5e+02 Score=26.61 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=27.7
Q ss_pred HHHccCc-EEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003655 658 YICDTKG-AFVQPALYEAFGLTVVEAMTCGLPTFATCKG 695 (805)
Q Consensus 658 ~ia~aaD-vfV~PS~~E~fGltvlEAMA~GlPVVaT~~G 695 (805)
++....| +++.|...+...-.+-++...|.|||..+.+
T Consensus 51 ~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 51 AISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3343455 5556666667777788899999999998777
No 252
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=21.11 E-value=1.1e+03 Score=26.27 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=38.6
Q ss_pred ccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCC-CcEEEec
Q 003655 579 LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWIS 644 (805)
Q Consensus 579 L~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~-~~V~flG 644 (805)
+.-..++..++++.....+..+.+.++++|+. +++++.++++++. +++.++-
T Consensus 9 mGgD~~p~~vl~aa~~a~~~~~~~~~iLvG~~--------------~~I~~~l~~~~~~~~~~~Iv~ 61 (334)
T PRK05331 9 MGGDFGPEVVVPGALQALKEHPDLEIILVGDE--------------EKIKPLLAKKPDLKERIEIVH 61 (334)
T ss_pred CCCccCHHHHHHHHHHHHhcCCCeEEEEEeCH--------------HHHHHHHHhcCCCcCCcEEEe
Confidence 44578999999999888877777999999976 4556666666542 4567664
No 253
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=20.87 E-value=1.4e+02 Score=24.73 Aligned_cols=48 Identities=21% Similarity=0.388 Sum_probs=34.7
Q ss_pred CCCchHHHHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCCCcc--cHhHHh
Q 003655 221 ETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPC--TLETFL 270 (805)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p~~~--~~~~f~ 270 (805)
..||.+|+.-+++|=-|+|-. +.+.+.|-+.-+.. |++|+.. .+++|.
T Consensus 2 ~DP~~DFr~SM~EMI~~~~i~-~~~~LeeLL~cYL~-LN~~~~H~~Iv~aF~ 51 (59)
T PF04844_consen 2 SDPYEDFRESMVEMIEENGIR-DWDDLEELLACYLS-LNSPEHHKFIVEAFV 51 (59)
T ss_pred CCHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHH-hCChhhhhHHHHHHH
Confidence 469999999999999999988 55566666665554 5666633 456665
No 254
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=20.42 E-value=6.6e+02 Score=23.32 Aligned_cols=60 Identities=20% Similarity=0.048 Sum_probs=29.9
Q ss_pred CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHHHHHHHH
Q 003655 583 KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC 660 (805)
Q Consensus 583 Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~ia 660 (805)
.....+-+....+++..++-..+++|+... .+..+...++|++. +.-. ..+.+++..++.
T Consensus 62 ~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~------------~~~~~~~~~~G~d~-~~~~-----~~~~~~~~~~~~ 121 (122)
T cd02071 62 GHMTLFPEVIELLRELGAGDILVVGGGIIP------------PEDYELLKEMGVAE-IFGP-----GTSIEEIIDKIR 121 (122)
T ss_pred hhHHHHHHHHHHHHhcCCCCCEEEEECCCC------------HHHHHHHHHCCCCE-EECC-----CCCHHHHHHHHh
Confidence 344455555666666544323355555432 12234455678643 3333 345567776654
No 255
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=20.32 E-value=8.5e+02 Score=24.14 Aligned_cols=133 Identities=10% Similarity=0.116 Sum_probs=65.9
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHhcCCCCcEEEecCCCCcCChHH---HH
Q 003655 580 DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE---LY 656 (805)
Q Consensus 580 ~~~Kgi~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~e---l~ 656 (805)
.+.-|.+.+-+.+....+ .+.++.++|+.++ ..+++.+..++. .+++.+.|.........+ +.
T Consensus 27 ~r~~g~dl~~~ll~~~~~--~~~~v~llG~~~~----------~~~~~~~~l~~~--yp~l~i~g~~~g~~~~~~~~~i~ 92 (171)
T cd06533 27 ERVTGSDLMPALLELAAQ--KGLRVFLLGAKPE----------VLEKAAERLRAR--YPGLKIVGYHHGYFGPEEEEEII 92 (171)
T ss_pred cccCcHHHHHHHHHHHHH--cCCeEEEECCCHH----------HHHHHHHHHHHH--CCCcEEEEecCCCCChhhHHHHH
Confidence 345577777777777655 3567888887742 233333223221 234666664333443333 23
Q ss_pred HHHHc-cCcEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCC
Q 003655 657 RYICD-TKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD 732 (805)
Q Consensus 657 ~~ia~-aaDvfV~PS---~~E~fGltvlEAMA~GlPVVaT~~GG~~EiI~dg~~G~l~~p~d~e~lA~aI~~~l~~l~~d 732 (805)
+.++. ..|++++-- ..|-|.....+.+ ..+++.+ +||.-++. +|.. + .-|.-+-+.=.+++-++..+
T Consensus 93 ~~I~~~~pdiv~vglG~PkQE~~~~~~~~~l--~~~v~~~-vG~~~d~~----aG~~-~-raP~w~~~~glEWlyRl~~e 163 (171)
T cd06533 93 ERINASGADILFVGLGAPKQELWIARHKDRL--PVPVAIG-VGGSFDFL----AGTV-K-RAPKWMQKLGLEWLYRLLQE 163 (171)
T ss_pred HHHHHcCCCEEEEECCCCHHHHHHHHHHHHC--CCCEEEE-eceeeEec----cCCc-c-cCcHHHHHhCchhHHhhhhC
Confidence 33332 345555421 2344444433333 3444544 77777766 3332 2 12333333334566667777
Q ss_pred HHH
Q 003655 733 PSY 735 (805)
Q Consensus 733 p~~ 735 (805)
|.+
T Consensus 164 P~R 166 (171)
T cd06533 164 PRR 166 (171)
T ss_pred cch
Confidence 765
No 256
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=20.11 E-value=2.3e+02 Score=28.66 Aligned_cols=71 Identities=18% Similarity=0.240 Sum_probs=45.4
Q ss_pred HHHHHHHccCcEEEeCCC------CCCCcHHHHHHHHcCCcEEEcCc-----cccccccccCceEEE-ECCCCHHHHHHH
Q 003655 654 ELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGLPTFATCK-----GGPAEIIVNGKSGYH-IDPYHGEQAAEI 721 (805)
Q Consensus 654 el~~~ia~aaDvfV~PS~------~E~fGltvlEAMA~GlPVVaT~~-----GG~~EiI~dg~~G~l-~~p~d~e~lA~a 721 (805)
.+-+.+.. +|+.+.--. .-.|.-.+-|.|-|++|+|||-+ +...++-.-+ .-++ ++|.|-+.+...
T Consensus 93 al~rA~~~-aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P~v~~ik~~~-~v~v~lt~~NR~~i~~~ 170 (179)
T COG1618 93 ALRRALEE-ADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHPLVQRIKKLG-GVYVFLTPENRNRILNE 170 (179)
T ss_pred HHHHHhhc-CCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCChHHHHhhhcC-CEEEEEccchhhHHHHH
Confidence 45556664 788886322 23366678899999999999833 3333333333 3333 789998887777
Q ss_pred HHHHH
Q 003655 722 LVDFF 726 (805)
Q Consensus 722 I~~~l 726 (805)
|...+
T Consensus 171 Il~~L 175 (179)
T COG1618 171 ILSVL 175 (179)
T ss_pred HHHHh
Confidence 76554
Done!