Query 003657
Match_columns 805
No_of_seqs 383 out of 3624
Neff 6.9
Searched_HMMs 29240
Date Tue Mar 26 17:42:41 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003657.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1708-1712//hhsearch_pdb/003657hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s28_A Sucrose synthase 1; gly 1.0 1 1 1531.7 64.5 805 1-805 1-807 (816)
2 2r60_A Glycosyl transferase, g 1.0 1 1 382.8 39.5 433 273-767 4-459 (499)
3 3vue_A GBSS-I, granule-bound s 1.0 1 1 361.0 35.8 439 275-768 8-512 (536)
4 3fro_A GLGA glycogen synthase; 1.0 1 1 356.8 39.2 401 276-767 2-430 (439)
5 3c48_A Predicted glycosyltrans 1.0 1 1 355.7 37.4 406 274-767 18-425 (438)
6 1rzu_A Glycogen synthase 1; gl 1.0 1 1 340.0 30.5 429 277-766 1-474 (485)
7 2qzs_A Glycogen synthase; glyc 1.0 1 1 337.9 33.6 428 277-767 1-476 (485)
8 3okp_A GDP-mannose-dependent a 1.0 1 1 327.6 35.0 369 275-767 3-379 (394)
9 2jjm_A Glycosyl transferase, g 1.0 1 1 325.2 35.7 359 297-767 24-385 (394)
10 2iw1_A Lipopolysaccharide core 1.0 1 1 323.4 18.7 367 277-767 1-371 (374)
No 1
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=1531.66 Aligned_cols=805 Identities=84% Similarity=1.360 Sum_probs=777.3
Q ss_pred CCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEE
Q ss_conf 912--113333221798999998809999999999882698730125889999855476202357781899986222235
Q 003657 1 MAE--RALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRKHLTEGAFGEVLRATQEAI 78 (805)
Q Consensus 1 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (805)
|++ ++|+|++||+|++++++++||+++++||++|+++||++||+|||+++|++++++++.++.+|+||++|++|||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (816)
T 3s28_A 1 MANAERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAI 80 (816)
T ss_dssp --------------------------CTTHHHHHHHHHHHTCSEEEEHHHHHHTTTTTSCGGGCCCSTHHHHHHTEEEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEE
T ss_conf 98754311143348888998999759999999999986299720299999999999986220334681999998524104
Q ss_pred ECCCEEEEEECCCCCEEEEEEEECCCCEEEECCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 70981899985777408899985074104541877776310100378679986035415555567888888999775234
Q 003657 79 VLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVE 158 (805)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (805)
|.|||||||||||||+|||+|||++||+||+|||+|||+|||+|||++.+++++||+||+|||++||++++|+||||||+
T Consensus 81 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (816)
T 3s28_A 81 VLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVD 160 (816)
T ss_dssp ECSSEEEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHHHHHHHSSCCCTTSCEEECGGGGTTSCCCCCGGGTTBHHH
T ss_pred ECCCEEEEEECCCCCCEEEEEEEHHHCCEEEECHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHH
T ss_conf 46872799982887425999987300711453699998868985388778887057764554357998898654457488
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 64476321004999873058999864356991323056779978999999999998401999999167899964307665
Q 003657 159 FLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLER 238 (805)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (805)
|||||||||||+|+++++|||+||++|+|+|++|||||||+|+.+||++|++|+++|+++|+||||++|+++||+|||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (816)
T 3s28_A 161 FLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLER 240 (816)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTCCSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCB
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 88888776654891555799999997234990641058767999999999999999854999998899999999728888
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 86871899999999999952399902086774269984169999234456656767888744320123788899899999
Q 003657 239 GWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEML 318 (805)
Q Consensus 239 gw~~~~~r~~~~~~~l~~~~~~p~~~~~~~f~~~~~~~~rI~iis~hg~~~~~~~lg~p~tGG~~~yv~d~~raL~~eLa 318 (805)
||||||+||+|||++|++++++|||+++|+|++|+||+|+|+++|+||||+|.+++|+||||||++||+|||||||++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela 320 (816)
T 3s28_A 241 GWGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEML 320 (816)
T ss_dssp CSCSBHHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
T ss_conf 76876899999999999985199963077773658852489998477665754457888889836509989989999999
Q ss_pred HHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99998899421120698368999888865530146427567299992467677532233454565111899999999999
Q 003657 319 LRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEI 398 (805)
Q Consensus 319 ~~L~~~Gh~V~~~I~IiT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i 398 (805)
++|+++||+|+|+|+|+|+.+++..|+.|+++.+.+.++++++|+|+|+++.++++++|++++.+|+|+..|+..+...+
T Consensus 321 ~~L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~i 400 (816)
T 3s28_A 321 QRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVEL 400 (816)
T ss_dssp HHHHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99997799620016899689878777765775115548697599996687766543345657788999999999999999
Q ss_pred HHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 99839995499984899259999999973994999944997556999702331004111010033486997521779991
Q 003657 399 AKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (805)
Q Consensus 399 ~~~~~~kPDIIh~h~~~~~lva~llar~lgvp~V~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~al~~Ad~IIt 478 (805)
....+++|||||+|++.+++++.++++++|+|+|+|.|++...++..++.+|+.....|++++++.++..+++.||.|||
T Consensus 401 l~~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa 480 (816)
T 3s28_A 401 SKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIIT 480 (816)
T ss_dssp HHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred HHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_conf 99658997399968853899999999975998899981663001222330155677888898888899999984999998
Q ss_pred CCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHH
Q ss_conf 58887721035445334443455655212222777789957992399557887897178984103761357742061456
Q 003657 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 479 ~S~~~~~~~~~~vgqy~s~~~~~~p~l~~~v~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~~~~~~~~ 558 (805)
+|+++++.+.+.+++|.++.+|++|++|++++|++++++|+.|||||+|.+.|.|......+....++.++..++++.+.
T Consensus 481 ~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~ 560 (816)
T 3s28_A 481 STFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVEN 560 (816)
T ss_dssp SCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCB
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHH
T ss_conf 88999999998887764420135411221012244677887998897478872863103554320023200012460567
Q ss_pred HHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 64412555899959999961158889789999999957029985999995889999730798999999999999729999
Q 003657 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 638 (805)
Q Consensus 559 ~~~lG~l~~~~k~iIl~iGRL~~~Kgi~~Liea~~~l~~~~~~~~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~ 638 (805)
++.+|++.++++++|+++||+++.||++.+++|++++.+.+++++|+|+|+|++..+.+.++.++.+++.++++++++.+
T Consensus 561 r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~ 640 (816)
T 3s28_A 561 KEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNG 640 (816)
T ss_dssp TTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBB
T ss_pred HHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 77744457899839999744722179999999999978557996999996887533343356999999999999749987
Q ss_pred CEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHH
Q ss_conf 59990487776783789999970173899579989876899999983996998374452222001762999899999999
Q 003657 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQA 718 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~la~aadifV~PS~~E~fGltilEAMA~GlPVIat~~GG~~EiI~dg~~G~lidp~d~e~l 718 (805)
+|.|+|++.+.++.+++++++++++|+||+||.+|+||++++||||||+|||+|+.||+.|++.++.+|++++|+|++++
T Consensus 641 ~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~L 720 (816)
T 3s28_A 641 QFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQA 720 (816)
T ss_dssp BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHH
T ss_pred CEEECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCHHHH
T ss_conf 28981675566899999999995690999888755764999999980999999689876999706981899689999999
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999981089999999999999999994899999999999998710236621033886355899987743110000
Q 003657 719 AEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAE 798 (805)
Q Consensus 719 A~aI~~~l~~l~~dp~~~~~ls~~ar~~v~~~ysw~~~a~~ll~Ly~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (805)
+++|.++++.+..|++.+++|+++|++++.++|||+.++++++++|+.|+||++++++++++++||+||||+|+|||||+
T Consensus 721 A~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g~wk~vs~~~r~~~~ryle~~~~l~~~~~~~ 800 (816)
T 3s28_A 721 ADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQ 800 (816)
T ss_dssp HHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999875269999999999999999986899999999999999976754213545388888999999986056775
Q ss_pred CCCCCCC
Q ss_conf 2776679
Q 003657 799 SVPLAVE 805 (805)
Q Consensus 799 ~~~~~~~ 805 (805)
++|+++|
T Consensus 801 ~~~~~~~ 807 (816)
T 3s28_A 801 AVPLAQD 807 (816)
T ss_dssp HSCCCCC
T ss_pred CCCCCCC
T ss_conf 0887631
No 2
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=382.80 Aligned_cols=433 Identities=29% Similarity=0.473 Sum_probs=315.0
Q ss_pred CCCCCEEEEECCCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCC
Q ss_conf 99841699992344566567--6788874432012378889989999999998899421120698368999888865530
Q 003657 273 IPMVFNVVILTPHGYFAQDD--VLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQR 350 (805)
Q Consensus 273 ~~~~~rI~iis~hg~~~~~~--~lg~p~tGG~~~yv~d~~raL~~eLa~~L~~~Gh~V~~~I~IiT~~~~~~~g~~~~~~ 350 (805)
++++|||++++++++|...+ +.+.+..||.+.++. +|+++|.++||+|+ |+|..........+...
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~ 71 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVK--------EVSLALAEMGVQVD----IITRRIKDENWPEFSGE 71 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCCBTTBGGGCCS
T ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHH--------HHHHHHHHCCCEEE----EEECCCCCCCCCCHHHH
T ss_conf 5445249999657774434423478888799433499--------99999985598489----99578872336511356
Q ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 14642756729999246767753223345456511189999999999999839995499984899259999999973994
Q 003657 351 LEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVT 430 (805)
Q Consensus 351 ~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgvp 430 (805)
.+......++.++++|..... +..+...|.++..+...+.+.+... ..+||+||+|++..++++.++++..++|
T Consensus 72 ~~~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~Divh~~~~~~~~~~~~~~~~~~~p 145 (499)
T 2r60_A 72 IDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYREE-GKFPQVVTTHYGDGGLAGVLLKNIKGLP 145 (499)
T ss_dssp EEECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHCCC
T ss_pred HHHCCCCCCEEEEEECCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 775067898179982577767-----7688999998999999999999853-8998889975786207999988735996
Q ss_pred EEEEECCCCCCCCC---CCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCCCC--CCCCCCCCCCCCCCC
Q ss_conf 99994499755699---9702331004111010033486997521779991588877210354--453344434556552
Q 003657 431 QCTIAHALEKTKYP---DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT--VGQYESHTAFTLPGL 505 (805)
Q Consensus 431 ~V~t~H~l~~~~~~---~s~~~~~~~~~~y~~~~~~~~e~~al~~Ad~IIt~S~~~~~~~~~~--vgqy~s~~~~~~p~l 505 (805)
+|.+.|+....... ........+...+++......++..++.+|.+|++|....+...+. .|
T Consensus 146 ~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g------------- 212 (499)
T 2r60_A 146 FTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYR------------- 212 (499)
T ss_dssp EEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGT-------------
T ss_pred EEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCC-------------
T ss_conf 8998068400111344147877612455678889999999998468999988889999998641246-------------
Q ss_pred EEEECCC-CC-CCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHC-----CCCCCCCCEEEEEEE
Q ss_conf 1222277-77-8995799239955788789717898410376135774206145664412-----555899959999961
Q 003657 506 YRVVHGI-DV-FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC-----VLKDRNKPILFTMAR 578 (805)
Q Consensus 506 ~~~v~gi-~~-~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~~~~~~~~~~~lG-----~l~~~~k~iIl~iGR 578 (805)
.+ +. ...++.+||||+|.+.|.+......+ ...++.+| + ++++++|+++||
T Consensus 213 -----~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~---------------~~~r~~~~~~~~~~--~~~~~~i~~vGr 270 (499)
T 2r60_A 213 -----GAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIK---------------AKITKYLERDLGSE--RMELPAIIASSR 270 (499)
T ss_dssp -----TTCCTTCGGGEEECCCCBCTTTSSSCCCHHHH---------------HHHHHHHHHHSCGG--GTTSCEEEECSC
T ss_pred -----CCCCCCCCCCEEEECCCCCHHHCCCCCHHHHH---------------HHHHHHHCCCCCCC--CCCCCEEEEEEC
T ss_conf -----42234678876998799586656864103567---------------89998836433456--888768999606
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCC-EEEEEEECCCCC----CCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHH
Q ss_conf 15888978999999995702998-599999588999----9730798999999999999729999599904877767837
Q 003657 579 LDRVKNLTGLVEWYGKNAKLREL-VNLVVVGGDRRK----ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNG 653 (805)
Q Consensus 579 L~~~Kgi~~Liea~~~l~~~~~~-~~LvIVG~g~~~----~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~ 653 (805)
+.+.||++.+++|+..+.+..++ +.|+|+|++... .....++.++.++++++++++++.++|.|+| .++.+
T Consensus 271 l~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G----~v~~~ 346 (499)
T 2r60_A 271 LDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP----LNSQQ 346 (499)
T ss_dssp CCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE----CCSHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC----CCCHH
T ss_conf 85015889999999999873888659999878887532211113201479999999998649986099878----89989
Q ss_pred HHHHHHHCCC----CEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 8999997017----389957998987689999998399699837445222200176299989999999999999999981
Q 003657 654 ELYRYICDTK----GAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 729 (805)
Q Consensus 654 el~~~la~aa----difV~PS~~E~fGltilEAMA~GlPVIat~~GG~~EiI~dg~~G~lidp~d~e~lA~aI~~~l~~l 729 (805)
++..+++. + |++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++
T Consensus 347 ~~~~~~~~-a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll--- 422 (499)
T 2r60_A 347 ELAGCYAY-LASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF--- 422 (499)
T ss_dssp HHHHHHHH-HHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHH---
T ss_pred HHHHHHHH-CCCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHH---
T ss_conf 99999995-57679889978645897968999997699889816887788734786079958999999999999998---
Q ss_pred HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 08999999999999999999489999999999999871
Q 003657 730 KADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 730 ~~dp~~~~~ls~~ar~~v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
.|++.+.+|++++++++.++|+|+.++++++++|+..
T Consensus 423 -~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 459 (499)
T 2r60_A 423 -ESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEI 459 (499)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHH
T ss_pred -HCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf -6999999999999999987579999999999999998
No 3
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=361.00 Aligned_cols=439 Identities=15% Similarity=0.165 Sum_probs=288.9
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 84169999234456656767888744320123788899899999999988994211206983689998888655301464
Q 003657 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (805)
Q Consensus 275 ~~~rI~iis~hg~~~~~~~lg~p~tGG~~~yv~d~~raL~~eLa~~L~~~Gh~V~~~I~IiT~~~~~~~g~~~~~~~e~i 354 (805)
..|||+++|+..+| ...+||...++. .|.++|+++||+|. |+++.++......-......+
T Consensus 8 ~~MkIl~vs~E~~P-------~~K~GGLadvv~--------~L~~aL~~~G~~V~----Vi~P~Y~~~~~~~~~~~~~~~ 68 (536)
T 3vue_A 8 HHMNVVFVGAEMAP-------WSKTGGLGDVLG--------GLPPAMAANGHRVM----VISPRYDQYKDAWDTSVVAEI 68 (536)
T ss_dssp CCCEEEEECSCBTT-------TBCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCSCCTTCEEEEEEEEE
T ss_pred CCCEEEEEEEECCC-------HHCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCHHHHHHCCCCEEEEE
T ss_conf 97389999872431-------212676999999--------99999997699699----990485022242265168999
Q ss_pred C---CCCCEEEEEECCCCC------CC-CCCC-------CCCCC----CCHHHHHHHH--HHHHHHHHHHC---------
Q ss_conf 2---756729999246767------75-3223-------34545----6511189999--99999999983---------
Q 003657 355 Y---GTKYSDILRVPFRTE------KG-VVRK-------WISRF----EVWPYLETYT--EDVAVEIAKEL--------- 402 (805)
Q Consensus 355 ~---~~~~v~I~rvp~~~~------~~-~~~~-------~isr~----~i~p~l~~f~--~~~~~~i~~~~--------- 402 (805)
. ....+++.+.+.... ++ +..+ .++.. +.....++|+ ..+..++...+
T Consensus 69 ~~~~~~~~~~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~ 148 (536)
T 3vue_A 69 KVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFK 148 (536)
T ss_dssp EETTEEEEEEEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCC
T ss_pred EECCCEEEEEEEEEEECCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 83683378999999978955999647554123346677866688756766417999999999999999973026530110
Q ss_pred --CCCCEEEEECCCCCHHHHHHHHHHC-------CCCEEEEECCCCCCCC-CCCHH--------HHHH--C---CCCCCC
Q ss_conf --9995499984899259999999973-------9949999449975569-99702--------3310--0---411101
Q 003657 403 --QGKPDLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKY-PDSDI--------YWKN--L---DDKYHF 459 (805)
Q Consensus 403 --~~kPDIIh~h~~~~~lva~llar~l-------gvp~V~t~H~l~~~~~-~~s~~--------~~~~--~---~~~y~~ 459 (805)
..++||||+|+|.+++++.+++... ++|.|+|+|++..... +.... .+.. . .....+
T Consensus 149 ~~~~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (536)
T 3vue_A 149 GTYGEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVE 228 (536)
T ss_dssp SCCCSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCCCCCC
T ss_conf 14799879997760489999999986402332025634542157422455553336441896564010333311464100
Q ss_pred CHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHH
Q ss_conf 00334869975217799915888772103544533444345565521222277778995799239955788789717898
Q 003657 460 SCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKR 539 (805)
Q Consensus 460 ~~~~~~e~~al~~Ad~IIt~S~~~~~~~~~~vgqy~s~~~~~~p~l~~~v~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~ 539 (805)
...+...+.++..||.|+|+|+..++.+....+. +.. + ..... ..++.+|+||||.+.|.|.++...
T Consensus 229 ~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~-g~~-------l---~~~~~--~~~i~~I~NGiD~~~~~p~~d~~~ 295 (536)
T 3vue_A 229 GRKINWMKAGILEADRVLTVSPYYAEELISGIAR-GCE-------L---DNIMR--LTGITGIVNGMDVSEWDPSKDKYI 295 (536)
T ss_dssp EEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCC-CSS-------S---CCCSC--CCSCEECCCCCCTTTSCTTTCSSS
T ss_pred CCCHHHHHHHHHHCCEEEECCHHHHHHHHCCCCC-CCC-------C---CCCCC--CCCEEEEECCCCHHHCCCCCCCCC
T ss_conf 3304399999985367787687885343126344-522-------0---01254--578189979966421488776210
Q ss_pred HHHC-CCHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCH
Q ss_conf 4103-761357742061456644125558999599999611588897899999999570299859999958899997307
Q 003657 540 RLKS-FHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDL 618 (805)
Q Consensus 540 rl~~-~~~~i~~~~~~~~~~~~~lG~l~~~~k~iIl~iGRL~~~Kgi~~Liea~~~l~~~~~~~~LvIVG~g~~~~~~d~ 618 (805)
.... ....++....++...++.+|+..+++.|+|+++||+.+.||++.|++|+.++.+ .+.+|+++|.|..
T Consensus 296 ~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~--~~~~l~l~G~G~~------ 367 (536)
T 3vue_A 296 TAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ--EDVQIVLLGTGKK------ 367 (536)
T ss_dssp SCCCCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT--SSCEEEEECCBCH------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH--HCCEEEEEECCCC------
T ss_conf 01444345556567779999986199879997589999653023784789999997685--4985999954672------
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCC
Q ss_conf 98999999999999729999599904877767837899999701738995799898768999999839969983744522
Q 003657 619 EEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA 698 (805)
Q Consensus 619 ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~E~fGltilEAMA~GlPVIat~~GG~~ 698 (805)
.....++.....+ .+++.+.+ ..+.+++..+++. +|+||+||++|+||++++|||+||+|||+|+.||++
T Consensus 368 ---~~~~~~~~~~~~~--~~~v~~~~----~~~~~~~~~~~~~-aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~ 437 (536)
T 3vue_A 368 ---KFEKLLKSMEEKY--PGKVRAVV----KFNAPLAHLIMAG-ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLV 437 (536)
T ss_dssp ---HHHHHHHHHHHHS--TTTEEEEC----SCCHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHH
T ss_pred ---HHHHHHHHHHHHC--CCCEEEEE----ECCHHHHHHHHHH-HHEEECCCCCCCCCHHHHHHHHCCCCEEECCCCCCH
T ss_conf ---6899999987616--88549997----1468889999986-234253465689888999999869989990799822
Q ss_pred CCCCCCCEEE----------EECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
Q ss_conf 2200176299----------989999999999999999981089999999999999999994899999999999998710
Q 003657 699 EIIVNGKSGY----------HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYG 768 (805)
Q Consensus 699 EiI~dg~~G~----------lidp~d~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~~~ysw~~~a~~ll~Ly~~~~ 768 (805)
|+|.||++|| +++|.|+++++++|.+++. +..++ .|++|.+++. .++|||+..+++|+++|+-.+
T Consensus 438 e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~-~~~~~-~~~~~~~~am---~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 438 DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK-VVGTP-AYEEMVRNCM---NQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH-HTTSH-HHHHHHHHHH---HSCCSSHHHHHHHHHHHHTTC
T ss_pred HEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH-HCCCH-HHHHHHHHHH---HHCCCHHHHHHHHHHHHHHHH
T ss_conf 202279876324667775158799999999999999998-52959-9999999987---735999999999999999860
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=356.75 Aligned_cols=401 Identities=15% Similarity=0.158 Sum_probs=297.8
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCC---------
Q ss_conf 41699992344566567678887443201237888998999999999889942112069836899988886---------
Q 003657 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT--------- 346 (805)
Q Consensus 276 ~~rI~iis~hg~~~~~~~lg~p~tGG~~~yv~d~~raL~~eLa~~L~~~Gh~V~~~I~IiT~~~~~~~g~~--------- 346 (805)
.|||++++++.+| +..||.+.++. +|+++|+++||+|+ ++|...+......
T Consensus 2 ~MkIl~v~~~~~p--------~~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 2 HMKVLLLGFEFLP--------VKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CCEEEEECSCCTT--------SCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTCSCCEEEEEEEETTE
T ss_pred CEEEEEEECCCCC--------CCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCHHHHHCCCCCCCC
T ss_conf 5289999502177--------66688999999--------99999997798599----9836778823655246301476
Q ss_pred -CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHH-H-------HHHHHHHHHHHHHHHC--CCCCEEEEECCCC
Q ss_conf -553014642756729999246767753223345456511-1-------8999999999999983--9995499984899
Q 003657 347 -CGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWP-Y-------LETYTEDVAVEIAKEL--QGKPDLIIGNYSD 415 (805)
Q Consensus 347 -~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~p-~-------l~~f~~~~~~~i~~~~--~~kPDIIh~h~~~ 415 (805)
....... ....++.+.+++. .. ..+..++. + ...|.......+.... ..+||+||+|++.
T Consensus 62 ~~~~~~~~-~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~ 132 (439)
T 3fro_A 62 EVQVKVSY-EERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWH 132 (439)
T ss_dssp EEEEEEEE-EEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGG
T ss_pred CCCEEEEE-CCCCCCEEEEECC-HH-------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHH
T ss_conf 53102431-2578840899353-22-------052124667763002325789999999999974447998199946403
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCCCC
Q ss_conf 25999999997399499994499755699970233100411101003348699752177999158887721035445334
Q 003657 416 GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYE 495 (805)
Q Consensus 416 ~~lva~llar~lgvp~V~t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~al~~Ad~IIt~S~~~~~~~~~~vgqy~ 495 (805)
.++++.++++..++|.|++.|+.....++........+.. .........+..+++.+|.++++|....+. ..+.+
T Consensus 133 ~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~---~~~~~- 207 (439)
T 3fro_A 133 TVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSE-LAPYPDIDPEHTGGYIADIVTTVSRGYLID---EWGFF- 207 (439)
T ss_dssp GHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGG-GCCSSEECHHHHHHHHCSEEEESCHHHHHH---THHHH-
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHCCCCCCC-CCCCCEEEHHHHHHHHCCEEEECCHHHHHH---HHHHH-
T ss_conf 4345898865269978999653444568567747455100-356663207666554345887268989999---86056-
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCC----HHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCC
Q ss_conf 4434556552122227777899579923995578878971----789841037613577420614566441255589995
Q 003657 496 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYT----EEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKP 571 (805)
Q Consensus 496 s~~~~~~p~l~~~v~gi~~~~~ki~VIpnGvD~~~f~p~~----~~~~rl~~~~~~i~~~~~~~~~~~~~lG~l~~~~k~ 571 (805)
+....++.+||||+|.+.|.|.. .... ....++.+|+ +++ +
T Consensus 208 -----------------~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~---------------~~~~~~~~~~--~~~-~ 252 (439)
T 3fro_A 208 -----------------RNFEGKITYVFNGIDCSFWNESYLTGSRDER---------------KKSLLSKFGM--DEG-V 252 (439)
T ss_dssp -----------------GGGTTSEEECCCCCCTTTSCGGGSCSCHHHH---------------HHHHHHHHTC--CSC-E
T ss_pred -----------------HHCCCCEEECCCCCCCHHCCCCCCCCHHHHH---------------HHHHHHHCCC--CCC-C
T ss_conf -----------------5047734534788880430843221104566---------------9999997399--998-4
Q ss_pred EEEEEEECC-CCCCHHHHHHHHHHHHCCC--CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 999996115-8889789999999957029--9859999958899997307989999999999997299995999048777
Q 003657 572 ILFTMARLD-RVKNLTGLVEWYGKNAKLR--ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 572 iIl~iGRL~-~~Kgi~~Liea~~~l~~~~--~~~~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~ 648 (805)
+|+++||+. +.||++.+++|+..+.+.. ++++|+|+|+|+. ...+.+.+++++++ +.+.|.|
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~---------~~~~~l~~~~~~~~--~~~~~~g---- 317 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP---------ELEGWARSLEEKHG--NVKVITE---- 317 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCH---------HHHHHHHHHHHHCT--TEEEECS----
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCH---------HHHHHHHHHHHHCC--CEEEECC----
T ss_conf 79997333534366999999999998546678718999807972---------67789999875069--8999728----
Q ss_pred CCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 67837899999701738995799898768999999839969983744522220017629998999999999999999998
Q 003657 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEK 728 (805)
Q Consensus 649 ~v~~~el~~~la~aadifV~PS~~E~fGltilEAMA~GlPVIat~~GG~~EiI~dg~~G~lidp~d~e~lA~aI~~~l~~ 728 (805)
.++.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.+++
T Consensus 318 ~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll-- 393 (439)
T 3fro_A 318 MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL-- 393 (439)
T ss_dssp CCCHHHHHHHHTT-CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHH-CCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEECC-CEEEECCCCHHHHHHHHHHHH--
T ss_conf 7998899999997-799995898788618999999779976973788743168758-448968899899999999998--
Q ss_pred HHC-CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 108-999999999999999999489999999999999871
Q 003657 729 CKA-DPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 729 l~~-dp~~~~~ls~~ar~~v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
. |++.+++|++++++.+ ++|+|+.++++++++|+..
T Consensus 394 --~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 394 --ELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGS 430 (439)
T ss_dssp --HHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTC
T ss_pred --HCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
T ss_conf --319999999999999987-6472999999999999999
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=355.70 Aligned_cols=406 Identities=20% Similarity=0.289 Sum_probs=301.3
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 98416999923445665676788874432012378889989999999998899421120698368999888865530146
Q 003657 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (805)
Q Consensus 274 ~~~~rI~iis~hg~~~~~~~lg~p~tGG~~~yv~d~~raL~~eLa~~L~~~Gh~V~~~I~IiT~~~~~~~g~~~~~~~e~ 353 (805)
..+|||++++.+.+|. ...+.+..||.+.++. +|++.|.++||+|+ ++|....... . ....
T Consensus 18 ~~mmkIl~i~~~~~p~--~~~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~----~-~~~~ 78 (438)
T 3c48_A 18 GSHMRVAMISMHTSPL--QQPGTGDSGGMNVYIL--------STATELAKQGIEVD----IYTRATRPSQ----G-EIVR 78 (438)
T ss_dssp -CCCEEEEECTTSCTT--CC-------CHHHHHH--------HHHHHHHHTTCEEE----EEEECCCGGG----C-SEEE
T ss_pred CCHHEEEEEEEECCCC--CCCCCCCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCC----C-CCCC
T ss_conf 0020334577532563--4678788787999999--------99999996699799----9954788777----5-4002
Q ss_pred ECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 42756729999246767753223345456511189999999999999839995499984899259999999973994999
Q 003657 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (805)
Q Consensus 354 i~~~~~v~I~rvp~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgvp~V~ 433 (805)
. ..++.+++++...... .++...+.++..|.....+....... +||+||+|++..++++.++++..++|+|.
T Consensus 79 ~--~~~v~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~ 150 (438)
T 3c48_A 79 V--AENLRVINIAAGPYEG-----LSKEELPTQLAAFTGGMLSFTRREKV-TYDLIHSHYWLSGQVGWLLRDLWRIPLIH 150 (438)
T ss_dssp E--ETTEEEEEECCSCSSS-----CCGGGGGGGHHHHHHHHHHHHHHHTC-CCSEEEEEHHHHHHHHHHHHHHHTCCEEE
T ss_pred C--CCCEEEEEECCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHHCCC-CCCEEEECCCCHHHHHHHHHHHCCCCEEE
T ss_conf 5--6874899924787543-----23667789999999999999984168-99989947755789999999974999899
Q ss_pred EECCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 94499755699970233100411101003348699752177999158887721035445334443455655212222777
Q 003657 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (805)
Q Consensus 434 t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~al~~Ad~IIt~S~~~~~~~~~~vgqy~s~~~~~~p~l~~~v~gi~ 513 (805)
+.|+.......... .... .........+...++.+|.++++|....+...+.. |++
T Consensus 151 ~~h~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-------------------g~~ 206 (438)
T 3c48_A 151 TAHTLAAVKNSYRD----DSDT-PESEARRICEQQLVDNADVLAVNTQEEMQDLMHHY-------------------DAD 206 (438)
T ss_dssp ECSSCHHHHSCC--------CC-HHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHH-------------------CCC
T ss_pred EECCCCCCCCCCCC----CCCC-CCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH-------------------CCC
T ss_conf 94277401111100----2677-31578999999998408999984799999999985-------------------898
Q ss_pred CCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
Q ss_conf 78995799239955788789717898410376135774206145664412555899959999961158889789999999
Q 003657 514 VFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYG 593 (805)
Q Consensus 514 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~~~~~~~~~~~lG~l~~~~k~iIl~iGRL~~~Kgi~~Liea~~ 593 (805)
..++.+||||+|.+.|.+...... ...++.+|+ +.++++|+++||+.+.||++.+++++.
T Consensus 207 --~~k~~vi~ngvd~~~~~~~~~~~~----------------~~~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~ 266 (438)
T 3c48_A 207 --PDRISVVSPGADVELYSPGNDRAT----------------ERSRRELGI--PLHTKVVAFVGRLQPFKGPQVLIKAVA 266 (438)
T ss_dssp --GGGEEECCCCCCTTTSCCC----C----------------HHHHHHTTC--CSSSEEEEEESCBSGGGCHHHHHHHHH
T ss_pred --HHHEEEECCCCCCCCCCCCCCCHH----------------HHHHHHCCC--CCCCCEEEEEEEECCCCCHHHHHHHHH
T ss_conf --202688269766110478662024----------------566886089--989848999743156679899999999
Q ss_pred HHHCCCC--CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCC
Q ss_conf 9570299--85999995889999730798999999999999729999599904877767837899999701738995799
Q 003657 594 KNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 671 (805)
Q Consensus 594 ~l~~~~~--~~~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~ 671 (805)
.+.+..+ +++|+|+|+.... ....++++++++++++.++|.|+| .++.+++..+++. +|++|.||.
T Consensus 267 ~l~~~~p~~~~~l~i~G~~~~~-------g~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~ 334 (438)
T 3c48_A 267 ALFDRDPDRNLRVIICGGPSGP-------NATPDTYRHMAEELGVEKRIRFLD----PRPPSELVAVYRA-ADIVAVPSF 334 (438)
T ss_dssp HHHHHCTTCSEEEEEECCBC-------------CHHHHHHHHTTCTTTEEEEC----CCCHHHHHHHHHH-CSEEEECCS
T ss_pred HHHHHCCCCCEEEEEEECCCCC-------CCHHHHHHHHHHHCCCCCCEEECC----CCCHHHHHHHHHH-CCEEEECCC
T ss_conf 9996397766699998188877-------727899999999719878689858----8985889999985-899998740
Q ss_pred CCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 89876899999983996998374452222001762999899999999999999999810899999999999999999948
Q 003657 672 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKY 751 (805)
Q Consensus 672 ~E~fGltilEAMA~GlPVIat~~GG~~EiI~dg~~G~lidp~d~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~~~y 751 (805)
+|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++.+.+|++++++++.+ |
T Consensus 335 ~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~-~ 409 (438)
T 3c48_A 335 NESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLL----DDDETRIRMGEDAVEHART-F 409 (438)
T ss_dssp CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHH-H
T ss_pred CCCCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHH-C
T ss_conf 2687559999987699889627987257750797279879999999999999997----5989999999999999885-7
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 9999999999999871
Q 003657 752 TWKIYSQRLLTLTGVY 767 (805)
Q Consensus 752 sw~~~a~~ll~Ly~~~ 767 (805)
+|+.++++++++|+..
T Consensus 410 s~~~~~~~~~~~~~~~ 425 (438)
T 3c48_A 410 SWAATAAQLSSLYNDA 425 (438)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
T ss_conf 9999999999999998
No 6
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=340.04 Aligned_cols=429 Identities=14% Similarity=0.169 Sum_probs=280.6
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCC--------
Q ss_conf 169999234456656767888744320123788899899999999988994211206983689998888655--------
Q 003657 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-------- 348 (805)
Q Consensus 277 ~rI~iis~hg~~~~~~~lg~p~tGG~~~yv~d~~raL~~eLa~~L~~~Gh~V~~~I~IiT~~~~~~~g~~~~-------- 348 (805)
|||++++...+|. +..||.+.++. +|+++|+++||+|+ |+|...+.... .+.
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~-~~~~~~~~~~~ 60 (485)
T 1rzu_A 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKA-AVTDPVKCFEF 60 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHH-HCCSCEEEEEE
T ss_pred CEEEEEEEEECCC-------CCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCCC-CCCCCCEEEEE
T ss_conf 9699994465156-------56654999999--------99999997698699----99156443344-43565136899
Q ss_pred -----CCEEEE-CCCCCEEEEEECCCCCCCCCCC-CCCC---CCCHHH----HHHHHHHHHHHHHHHC--CCCCEEEEEC
Q ss_conf -----301464-2756729999246767753223-3454---565111----8999999999999983--9995499984
Q 003657 349 -----QRLEKV-YGTKYSDILRVPFRTEKGVVRK-WISR---FEVWPY----LETYTEDVAVEIAKEL--QGKPDLIIGN 412 (805)
Q Consensus 349 -----~~~e~i-~~~~~v~I~rvp~~~~~~~~~~-~isr---~~i~p~----l~~f~~~~~~~i~~~~--~~kPDIIh~h 412 (805)
...... ....++.+++++...... +. .... ...|+. ...|... ...+.+.+ +.+|||||+|
T Consensus 61 ~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~DiIh~~ 137 (485)
T 1rzu_A 61 TDLLGEKADLLEVQHERLDLLILDAPAYYE--RSGGPYLGQTGKDYPDNWKRFAALSLA-AARIGAGVLPGWRPDMVHAH 137 (485)
T ss_dssp SCSSSCCEEEEEEEETTEEEEEEECHHHHC--SSSCSSBCTTSSBCTTHHHHHHHHHHH-HHHHHTTCSSSCCCSEEEEE
T ss_pred EEECCCEEEEEEEEECCCEEEEEECHHHHC--CCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHHHHCCCCCCCEEEEC
T ss_conf 983087478999996695699984867727--776655886566653067999999999-99999986157999889964
Q ss_pred CCCCHHHHHHHHHH--CCCCEEEEECCCCCCCC-CCCHHHH-----HHCC-CCCCCCHHHHHHHHHHHCCCEEEECCHHH
Q ss_conf 89925999999997--39949999449975569-9970233-----1004-11101003348699752177999158887
Q 003657 413 YSDGNIVASLLAHK--LGVTQCTIAHALEKTKY-PDSDIYW-----KNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 413 ~~~~~lva~llar~--lgvp~V~t~H~l~~~~~-~~s~~~~-----~~~~-~~y~~~~~~~~e~~al~~Ad~IIt~S~~~ 483 (805)
.+..++++.++++. .++|.|++.|+...... ....... ..+. ....+......++.+++.+|.++++|+..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 217 (485)
T 1rzu_A 138 DWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSY 217 (485)
T ss_dssp HHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHH
T ss_pred CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHH
T ss_conf 63055789997310358997899966754468788778734399803202000132562359998886467799608758
Q ss_pred HHHCCCC-CCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHH
Q ss_conf 7210354-453344434556552122227777899579923995578878971789841037613577420614566441
Q 003657 484 IAGSKDT-VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 484 ~~~~~~~-vgqy~s~~~~~~p~l~~~v~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~~~~~~~~~~~l 562 (805)
.+...+. .|. .++.+ +.....++.+||||+|.+.|.|....................+....++.+
T Consensus 218 ~~~~~~~~~g~-------~~~~~------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 284 (485)
T 1rzu_A 218 AEEILTAEFGM-------GLEGV------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF 284 (485)
T ss_dssp HHHTTSHHHHT-------TCHHH------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred HHHHHCCCCCC-------CHHHH------HHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99983543576-------65899------986068816970898602058866511000124324456788699999962
Q ss_pred CCCCCCC-CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 2555899-959999961158889789999999957029985999995889999730798999999999999729999599
Q 003657 563 CVLKDRN-KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFR 641 (805)
Q Consensus 563 G~l~~~~-k~iIl~iGRL~~~Kgi~~Liea~~~l~~~~~~~~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~ 641 (805)
|+ +.+ +++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|+. ...+.+++++++++ ++|.
T Consensus 285 ~~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~---------~~~~~l~~~~~~~~--~~v~ 349 (485)
T 1rzu_A 285 RI--DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGDV---------ALEGALLAAASRHH--GRVG 349 (485)
T ss_dssp TC--CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBCH---------HHHHHHHHHHHHTT--TTEE
T ss_pred CC--CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--CCCEEEEEECCCH---------HHHHHHHHHHHHCC--CCEE
T ss_conf 98--88998399997257531287999999999872--6956999968946---------89999999998678--8689
Q ss_pred -EECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCC---------CEEEEEC
Q ss_conf -904877767837899999701738995799898768999999839969983744522220017---------6299989
Q 003657 642 -WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHID 711 (805)
Q Consensus 642 -flG~~~~~v~~~el~~~la~aadifV~PS~~E~fGltilEAMA~GlPVIat~~GG~~EiI~dg---------~~G~lid 711 (805)
|.| . +.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|++++
T Consensus 350 ~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~ 423 (485)
T 1rzu_A 350 VAIG----Y-NEPLSHLMQAG-CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFS 423 (485)
T ss_dssp EEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEES
T ss_pred EECC----C-CHHHHHHHHHC-CCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCHHHEECCCCCCCCCCCCCCCEEEC
T ss_conf 9438----9-97999999852-9999978446887779999997799779808998311321565332345677634867
Q ss_pred CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 9999999999999999810899999999999999999948999999999999987
Q 003657 712 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 712 p~d~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
++|+++++++|.+++. +..|++.+++|++++++ ++|||+.++++++++|+.
T Consensus 424 ~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 424 PVTLDGLKQAIRRTVR-YYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp SCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHH---HHCCHHHHHHHHHHHHHH
T ss_conf 8999999999999998-72799999999999998---868969999999999998
No 7
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=337.94 Aligned_cols=428 Identities=15% Similarity=0.160 Sum_probs=281.1
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCC----------
Q ss_conf 1699992344566567678887443201237888998999999999889942112069836899988886----------
Q 003657 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT---------- 346 (805)
Q Consensus 277 ~rI~iis~hg~~~~~~~lg~p~tGG~~~yv~d~~raL~~eLa~~L~~~Gh~V~~~I~IiT~~~~~~~g~~---------- 346 (805)
|||++++...+|. +..||.+.++. +|+++|+++||+|+ |+|...+......
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 2qzs_A 1 MQVLHVCSEMFPL-------LKTGGLADVIG--------ALPAAQIADGVDAR----VLLPAFPDIRRGVTDAQVVSRRD 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCHHHHHHCTTCEEEEEEC
T ss_pred CEEEEEEEECCCC-------CCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCCCCCCCCEEEEEEC
T ss_conf 9699996410466-------56773999999--------99999997498789----99447643454345640578741
Q ss_pred -CCCCEEEE-CCCCCEEEEEECCCC---CCC-CCCCCCCCCCCHHH----HHHHHHHHHHHHHHHCC--CCCEEEEECCC
Q ss_conf -55301464-275672999924676---775-32233454565111----89999999999999839--99549998489
Q 003657 347 -CGQRLEKV-YGTKYSDILRVPFRT---EKG-VVRKWISRFEVWPY----LETYTEDVAVEIAKELQ--GKPDLIIGNYS 414 (805)
Q Consensus 347 -~~~~~e~i-~~~~~v~I~rvp~~~---~~~-~~~~~isr~~i~p~----l~~f~~~~~~~i~~~~~--~kPDIIh~h~~ 414 (805)
.+...+.. ....++.+++++... ..+ .... .. ..-|+. ...+... ...+.+... .+|||||+|.+
T Consensus 62 ~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Divh~~~~ 138 (485)
T 2qzs_A 62 TFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHD-TN-LFAYTDNVLRFALLGWV-GAEMASGLDPFWRPDVVHAHDW 138 (485)
T ss_dssp CTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBC-TT-SCBCTTHHHHHHHHHHH-HHHHTTTSSTTCCCSEEEEETG
T ss_pred CCCCCEEEEEEEECCCEEEEEECHHHCCCCCCCCCC-CC-CCCCCCHHHHHHHHHHH-HHHHHHHHCCCCCCCEEEEECC
T ss_conf 568717999998789479997082650689876677-54-57787358999999999-9999998456789978996062
Q ss_pred CCHHHHHHHH-HHCCCCEEEEECCCCCCCC-CCCHHHHHHCCC------CCCCCHHHHHHHHHHHCCCEEEECCHHHHHH
Q ss_conf 9259999999-9739949999449975569-997023310041------1101003348699752177999158887721
Q 003657 415 DGNIVASLLA-HKLGVTQCTIAHALEKTKY-PDSDIYWKNLDD------KYHFSCQFTADLIAMNHTDFIITSTFQEIAG 486 (805)
Q Consensus 415 ~~~lva~lla-r~lgvp~V~t~H~l~~~~~-~~s~~~~~~~~~------~y~~~~~~~~e~~al~~Ad~IIt~S~~~~~~ 486 (805)
..++++.+++ +..++|+|++.|+...... .........+.. ...+......++.+++.+|.++++|+...+.
T Consensus 139 ~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 218 (485)
T 2qzs_A 139 HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE 218 (485)
T ss_dssp GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHH
T ss_pred CHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCEEEECCHHHHHH
T ss_conf 13378999754368997899946841357889888876499913213111232465469999987538688568899999
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCC------CC--CCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHH
Q ss_conf 0354453344434556552122227777------89--957992399557887897178984103761357742061456
Q 003657 487 SKDTVGQYESHTAFTLPGLYRVVHGIDV------FD--PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 487 ~~~~vgqy~s~~~~~~p~l~~~v~gi~~------~~--~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~~~~~~~~ 558 (805)
..+.. | |++. .. .++.+||||+|.+.|.|.........-..........+....
T Consensus 219 ~~~~~--~----------------~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 2qzs_A 219 ITEPQ--F----------------AYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQL 280 (485)
T ss_dssp TTSHH--H----------------HTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHH
T ss_pred HHCCC--C----------------CCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 85401--4----------------72468999850667866997469876645864442221236630065778849999
Q ss_pred HHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 64412555899959999961158889789999999957029985999995889999730798999999999999729999
Q 003657 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 638 (805)
Q Consensus 559 ~~~lG~l~~~~k~iIl~iGRL~~~Kgi~~Liea~~~l~~~~~~~~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~ 638 (805)
++.+|+..++++++|+++||+.+.||++.+++|+..+.+ ++++|+|+|+|+. ...+.+++++++++ +
T Consensus 281 r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~---------~~~~~l~~~~~~~~--~ 347 (485)
T 2qzs_A 281 QIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGDP---------VLQEGFLAAAAEYP--G 347 (485)
T ss_dssp HHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEECH---------HHHHHHHHHHHHST--T
T ss_pred HHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH--CCCEEEEEECCCH---------HHHHHHHHHHHHCC--C
T ss_conf 987198889997399996667543587999999999862--7948999928956---------78999999997579--9
Q ss_pred CEE-EECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCC---------CEEE
Q ss_conf 599-904877767837899999701738995799898768999999839969983744522220017---------6299
Q 003657 639 QFR-WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGY 708 (805)
Q Consensus 639 ~V~-flG~~~~~v~~~el~~~la~aadifV~PS~~E~fGltilEAMA~GlPVIat~~GG~~EiI~dg---------~~G~ 708 (805)
+|. |.| . +.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|+
T Consensus 348 ~v~~~~g----~-~~~~~~~~~~~-adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~ 421 (485)
T 2qzs_A 348 QVGVQIG----Y-HEAFSHRIMGG-ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGF 421 (485)
T ss_dssp TEEEEES----C-CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBE
T ss_pred CEEEECC----C-CHHHHHHHHHH-CCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCEE
T ss_conf 3899478----9-97999999975-8899978856787679999997799779878998325521576443444666459
Q ss_pred EECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 98999999999999999998108999999999999999999489999999999999871
Q 003657 709 HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 709 lidp~d~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
+++++|+++++++|.+++. +..|++.+.+|++++++ ++|||+.++++++++|+..
T Consensus 422 l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 422 VFEDSNAWSLLRAIRRAFV-LWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp EECSSSHHHHHHHHHHHHH-HHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHH
T ss_conf 9778999999999999998-70899999999999876---3289899999999999986
No 8
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=1.00 E-value=1 Score=327.56 Aligned_cols=369 Identities=18% Similarity=0.279 Sum_probs=280.2
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 84169999234456656767888744320123788899899999999988994211206983689998888655301464
Q 003657 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (805)
Q Consensus 275 ~~~rI~iis~hg~~~~~~~lg~p~tGG~~~yv~d~~raL~~eLa~~L~~~Gh~V~~~I~IiT~~~~~~~g~~~~~~~e~i 354 (805)
++|||+++++... |..||.+.++. .|++.| +||+|+ +++...+... ....
T Consensus 3 ~~mkIl~v~~~~~---------p~~gG~~~~~~--------~l~~~L--~g~~v~----v~~~~~~~~~-------~~~~ 52 (394)
T 3okp_A 3 ASRKTLVVTNDFP---------PRIGGIQSYLR--------DFIATQ--DPESIV----VFASTQNAEE-------AHAY 52 (394)
T ss_dssp -CCCEEEEESCCT---------TSCSHHHHHHH--------HHHTTS--CGGGEE----EEEECSSHHH-------HHHH
T ss_pred CCCEEEEEECCCC---------CCCCHHHHHHH--------HHHHHH--CCCEEE----EEECCCCCCC-------HHHH
T ss_conf 8866999927668---------86551999999--------999985--697689----9977888642-------4443
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC-EEE
Q ss_conf 2756729999246767753223345456511189999999999999839995499984899259999999973994-999
Q 003657 355 YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVT-QCT 433 (805)
Q Consensus 355 ~~~~~v~I~rvp~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgvp-~V~ 433 (805)
....++.+.+++.... ++. ..+...+.+.+.. .+||+||+|..........++++.++| ++.
T Consensus 53 ~~~~~~~~~~~~~~~~-------------~~~-~~~~~~l~~~~~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 53 DKTLDYEVIRWPRSVM-------------LPT-PTTAHAMAEIIRE---REIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp HTTCSSEEEEESSSSC-------------CSC-HHHHHHHHHHHHH---TTCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred CCCCCEEEEECCCCCC-------------CCC-HHHHHHHHHHHHH---CCCCEEEECCCCHHHHHHHHHHHCCCCCEEE
T ss_conf 3456628998456545-------------555-1469999999876---3898899888544889999997518981999
Q ss_pred EECCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCC
Q ss_conf 94499755699970233100411101003348699752177999158887721035445334443455655212222777
Q 003657 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (805)
Q Consensus 434 t~H~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~al~~Ad~IIt~S~~~~~~~~~~vgqy~s~~~~~~p~l~~~v~gi~ 513 (805)
+.|+... .|.. ... .....+..++.+|.++++|+...+...+.. +
T Consensus 116 ~~h~~~~--------~~~~-~~~-----~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-------------------~-- 160 (394)
T 3okp_A 116 STHGHEV--------GWSM-LPG-----SRQSLRKIGTEVDVLTYISQYTLRRFKSAF-------------------G-- 160 (394)
T ss_dssp ECCSTHH--------HHTT-SHH-----HHHHHHHHHHHCSEEEESCHHHHHHHHHHH-------------------C--
T ss_pred EECCCHH--------HHHH-CCH-----HHHHHHHHHHHCCEEEECCHHHHHHHHHHC-------------------C--
T ss_conf 9346423--------3321-220-----348999999867979976889999999841-------------------8--
Q ss_pred CCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH
Q ss_conf 78995799239955788789717898410376135774206145664412555899959999961158889789999999
Q 003657 514 VFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYG 593 (805)
Q Consensus 514 ~~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~~~~~~~~~~~lG~l~~~~k~iIl~iGRL~~~Kgi~~Liea~~ 593 (805)
...++.+||||+|.+.|.+...... ...++.+|+ ++++++|+++||+.+.||++.+++++.
T Consensus 161 -~~~~~~vi~ngv~~~~~~~~~~~~~----------------~~~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 161 -SHPTFEHLPSGVDVKRFTPATPEDK----------------SATRKKLGF--TDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp -SSSEEEECCCCBCTTTSCCCCHHHH----------------HHHHHHTTC--CTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred -CCCCEEEECCCCCHHHCCCCCCHHH----------------HHHHHHCCC--CCCCEEEEEEECCCCCCCHHHHHHHHH
T ss_conf -9998588369858887588772146----------------899986499--857669999764413458879999999
Q ss_pred HHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCC-
Q ss_conf 9570299859999958899997307989999999999997299995999048777678378999997017389957998-
Q 003657 594 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY- 672 (805)
Q Consensus 594 ~l~~~~~~~~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~- 672 (805)
++.+..++++|+|+|+|+. .+.+++++ .++.++|.|+| .++.+++..+++. +|++|.||.+
T Consensus 222 ~l~~~~~~~~l~i~G~g~~-----------~~~l~~~~--~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~ 283 (394)
T 3okp_A 222 QVIAARPDAQLLIVGSGRY-----------ESTLRRLA--TDVSQNVKFLG----RLEYQDMINTLAA-ADIFAMPARTR 283 (394)
T ss_dssp HHHHHSTTCEEEEECCCTT-----------HHHHHHHT--GGGGGGEEEEE----SCCHHHHHHHHHH-CSEEEECCCCB
T ss_pred HHHHHCCCEEEEEECCCHH-----------HHHHHHHH--HCCCCEEEECC----CCCHHHHHHHHHH-CCEEEECCCCC
T ss_conf 9886189869999868647-----------99999987--55457299907----8997899999986-89999457555
Q ss_pred ------CCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf ------98768999999839969983744522220017629998999999999999999998108999999999999999
Q 003657 673 ------EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 746 (805)
Q Consensus 673 ------E~fGltilEAMA~GlPVIat~~GG~~EiI~dg~~G~lidp~d~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~ 746 (805)
|+||++++|||+||+|||+++.||..|++.++ +|++++++|+++++++|.+++ .|++.+++|++++++.
T Consensus 284 ~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~ 358 (394)
T 3okp_A 284 GGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELL----DDPIRRAAMGAAGRAH 358 (394)
T ss_dssp GGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHH----TCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHHCC-CCEEECCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHH
T ss_conf 66656555673999999759979993899737787468-856728999999999999998----1999999999999999
Q ss_pred HHHHCCHHHHHHHHHHHHHHH
Q ss_conf 999489999999999999871
Q 003657 747 IEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 747 v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
+.++|+|+.++++++++|+..
T Consensus 359 ~~~~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 359 VEAEWSWEIMGERLTNILQSE 379 (394)
T ss_dssp HHHHTBHHHHHHHHHHHHHSC
T ss_pred HHHHCCHHHHHHHHHHHHHHH
T ss_conf 987479999999999999972
No 9
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=1.00 E-value=1 Score=325.22 Aligned_cols=359 Identities=18% Similarity=0.256 Sum_probs=267.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf 87443201237888998999999999889942112069836899988886553014642756729999246767753223
Q 003657 297 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRK 376 (805)
Q Consensus 297 p~tGG~~~yv~d~~raL~~eLa~~L~~~Gh~V~~~I~IiT~~~~~~~g~~~~~~~e~i~~~~~v~I~rvp~~~~~~~~~~ 376 (805)
|..||.+.++. +|++.|+++||+|+ ++|...+.... ....++.+..++.....
T Consensus 24 p~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~----------~~~~~i~~~~~~~~~~~----- 76 (394)
T 2jjm_A 24 PSVGGSGVVGT--------ELGKQLAERGHEIH----FITSGLPFRLN----------KVYPNIYFHEVTVNQYS----- 76 (394)
T ss_dssp C--CHHHHHHH--------HHHHHHHHTTCEEE----EECSSCC--------------CCCTTEEEECCCCC--------
T ss_pred CCCCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCCC----------CCCCCEEEEECCCCCCC-----
T ss_conf 89898789999--------99999996898799----99688877620----------03786289852566654-----
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHH-HHHHHHHHC--CCCEEEEECCCCCCCCCCCHHHHHHC
Q ss_conf 345456511189999999999999839995499984899259-999999973--99499994499755699970233100
Q 003657 377 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNI-VASLLAHKL--GVTQCTIAHALEKTKYPDSDIYWKNL 453 (805)
Q Consensus 377 ~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~l-va~llar~l--gvp~V~t~H~l~~~~~~~s~~~~~~~ 453 (805)
.+...++...+...+.+.+.. .+||+||+|++.... .+.++++.. ++|++.+.|+........
T Consensus 77 ---~~~~~~~~~~~~~~l~~~l~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-------- 142 (394)
T 2jjm_A 77 ---VFQYPPYDLALASKMAEVAQR---ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS-------- 142 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHH---HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT--------
T ss_pred ---CCCCCCCCHHHHHHHHHHHHH---CCCCEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC--------
T ss_conf ---001565207999999999977---699999972433777889998886267877799971575212588--------
Q ss_pred CCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 41110100334869975217799915888772103544533444345565521222277778995799239955788789
Q 003657 454 DDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP 533 (805)
Q Consensus 454 ~~~y~~~~~~~~e~~al~~Ad~IIt~S~~~~~~~~~~vgqy~s~~~~~~p~l~~~v~gi~~~~~ki~VIpnGvD~~~f~p 533 (805)
...+ ....+..++.+|.++++|+...+...+..+ . ..++.+||||+|.+.|.+
T Consensus 143 ~~~~-----~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~--------------------~--~~~~~vi~ngv~~~~~~~ 195 (394)
T 2jjm_A 143 DPSL-----NNLIRFGIEQSDVVTAVSHSLINETHELVK--------------------P--NKDIQTVYNFIDERVYFK 195 (394)
T ss_dssp CTTT-----HHHHHHHHHHSSEEEESCHHHHHHHHHHTC--------------------C--SSCEEECCCCCCTTTCCC
T ss_pred CHHH-----HHHHHHHHHHCCEEEECCHHHHHHHHHHHC--------------------C--CCCEEEECCCCCHHHCCC
T ss_conf 8778-----899999986199899979999999998528--------------------7--656799558756876088
Q ss_pred CCHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC
Q ss_conf 71789841037613577420614566441255589995999996115888978999999995702998599999588999
Q 003657 534 YTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK 613 (805)
Q Consensus 534 ~~~~~~rl~~~~~~i~~~~~~~~~~~~~lG~l~~~~k~iIl~iGRL~~~Kgi~~Liea~~~l~~~~~~~~LvIVG~g~~~ 613 (805)
..... .++.+|+ ++++++|+++||+.+.||++.+++++..+.+. .+++|+|+|+|+.
T Consensus 196 ~~~~~-------------------~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~- 252 (394)
T 2jjm_A 196 RDMTQ-------------------LKKEYGI--SESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE- 252 (394)
T ss_dssp CCCHH-------------------HHHHTTC--C---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT-
T ss_pred CCHHH-------------------HHHHCCC--CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH-CCCEEEEECCCHH-
T ss_conf 63488-------------------9987199--98880899950466535889999999999853-7978999889657-
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECC
Q ss_conf 97307989999999999997299995999048777678378999997017389957998987689999998399699837
Q 003657 614 ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 693 (805)
Q Consensus 614 ~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~E~fGltilEAMA~GlPVIat~ 693 (805)
.+++.++++++++.++|.|+|+ .+++..+++. +|++|+||.+|+||++++|||+||+|||+++
T Consensus 253 ----------~~~l~~~~~~~~l~~~v~~~g~------~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~PvI~~~ 315 (394)
T 2jjm_A 253 ----------FCTILQLVKNLHIEDRVLFLGK------QDNVAELLAM-SDLMLLLSEKESFGLVLLEAMACGVPCIGTR 315 (394)
T ss_dssp ----------HHHHHHHHHTTTCGGGBCCCBS------CSCTHHHHHT-CSEEEECCSCCSCCHHHHHHHHTTCCEEEEC
T ss_pred ----------HHHHHHHHHHCCCCCEEEEECC------HHHHHHHHHH-CCEEEECCCCCCCCHHHHHHHHCCCCEEEEC
T ss_conf ----------9999999997399875999276------6659999986-7899965666787268999996499889815
Q ss_pred CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 44522220017629998999999999999999998108999999999999999999489999999999999871
Q 003657 694 KGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 694 ~GG~~EiI~dg~~G~lidp~d~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
.||..|++.++.+|++++++|+++++++|.+++ .|++.+++|++++++++.++|+|+.++++++++|+..
T Consensus 316 ~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 385 (394)
T 2jjm_A 316 VGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL----KDEELHRNMGERARESVYEQFRSEKIVSQYETIYYDV 385 (394)
T ss_dssp CTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 898077763488539968999999999999997----4979999999999999987379999999999999999
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=1.00 E-value=1 Score=323.37 Aligned_cols=367 Identities=16% Similarity=0.217 Sum_probs=261.7
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECEEEEECCCCCCCCCCCCCCEEEECC
Q ss_conf 16999923445665676788874432012378889989999999998899421120698368999888865530146427
Q 003657 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~hg~~~~~~~lg~p~tGG~~~yv~d~~raL~~eLa~~L~~~Gh~V~~~I~IiT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||++++++.. | .||.+.++. ++++.|+++||+|+ +++.......
T Consensus 1 MkIl~i~~~~~---------~-~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYF---------P-FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC------------- 45 (374)
T ss_dssp -CEEEECSEEC---------T-TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------
T ss_pred CEEEEEEEECC---------C-CCCHHHHHH--------HHHHHHHHCCCEEE----EEECCCCCCC-------------
T ss_conf 96999972158---------8-761635999--------99999996798489----9964898878-------------
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEC
Q ss_conf 56729999246767753223345456511189999999999999839995499984899259999999973994999944
Q 003657 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 357 ~~~v~I~rvp~~~~~~~~~~~isr~~i~p~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgvp~V~t~H 436 (805)
.+++.+.++|...... ......+...+.+.+.. .+||+||+|.+..+..+...++..+++.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCCEEEEECCCCCCC-----------HHHHHHHHHHHHHHHHC---CCCCEEEEECCCCCCEEEECCCCCCCEEEEECC
T ss_conf 8774799971686443-----------01677899999999850---699889996677885213001565421333035
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHH--HCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 9975569997023310041110100334869975--21779991588877210354453344434556552122227777
Q 003657 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAM--NHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (805)
Q Consensus 437 ~l~~~~~~~s~~~~~~~~~~y~~~~~~~~e~~al--~~Ad~IIt~S~~~~~~~~~~vgqy~s~~~~~~p~l~~~v~gi~~ 514 (805)
+.. ......+.+.. ..+...+ +.+|.++++|+...+...+.. |++
T Consensus 112 ~~~-----------~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-------------------~~~- 158 (374)
T 2iw1_A 112 GFL-----------YRLTSRYRHYA--AFERATFEQGKSTKLMMLTDKQIADFQKHY-------------------QTE- 158 (374)
T ss_dssp CHH-----------HHTSHHHHHHH--HHHHHHHSTTCCCEEEESCHHHHHHHHHHH-------------------CCC-
T ss_pred CCH-----------HHHCHHHHHHH--HHHHHHHHCCCCCEEEECCHHHHHHHHHHH-------------------CCC-
T ss_conf 621-----------21047789999--999998642677579986989999999971-------------------897-
Q ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 89957992399557887897178984103761357742061456644125558999599999611588897899999999
Q 003657 515 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 594 (805)
Q Consensus 515 ~~~ki~VIpnGvD~~~f~p~~~~~~rl~~~~~~i~~~~~~~~~~~~~lG~l~~~~k~iIl~iGRL~~~Kgi~~Liea~~~ 594 (805)
..++.++|||+|.+.|.+......+ ...++.+|+ ++++++|+++||+.+.||++.+++++..
T Consensus 159 -~~~~~vi~ngv~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 220 (374)
T 2iw1_A 159 -PERFQILPPGIYPDRKYSEQIPNSR---------------EIYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALAS 220 (374)
T ss_dssp -GGGEEECCCCCCGGGSGGGSCTTHH---------------HHHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHT
T ss_pred -HHHEEEECCCCCHHHCCCCCCHHHH---------------HHHHHHHCC--CCCCEEEEEECCCHHHCCHHHHHHHHHH
T ss_conf -1106885698587761764423579---------------999997289--9787299996464101388999999998
Q ss_pred HHCC-CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 5702-998599999588999973079899999999999972999959990487776783789999970173899579989
Q 003657 595 NAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYE 673 (805)
Q Consensus 595 l~~~-~~~~~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~~~L~~~V~flG~~~~~v~~~el~~~la~aadifV~PS~~E 673 (805)
+.+. .++++|+++|+|+. +++.++++++++.++|.|+|+ .+++..+++. +|++|.||.+|
T Consensus 221 l~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~v~ps~~e 281 (374)
T 2iw1_A 221 LPESLRHNTLLFVVGQDKP------------RKFEALAEKLGVRSNVHFFSG------RNDVSELMAA-ADLLLHPAYQE 281 (374)
T ss_dssp SCHHHHHTEEEEEESSSCC------------HHHHHHHHHHTCGGGEEEESC------CSCHHHHHHH-CSEEEECCSCC
T ss_pred HHHCCCCCEEEEEECCCCH------------HHHHHHHHHCCCCCCEEECCC------CCCHHHHHHH-CCEEEECCCCC
T ss_conf 6760488669999708987------------999999997398773797788------4038999984-68898354247
Q ss_pred CCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEC-CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 87689999998399699837445222200176299989-99999999999999998108999999999999999999489
Q 003657 674 AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHID-PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYT 752 (805)
Q Consensus 674 ~fGltilEAMA~GlPVIat~~GG~~EiI~dg~~G~lid-p~d~e~lA~aI~~~l~~l~~dp~~~~~ls~~ar~~v~~~ys 752 (805)
+||++++|||+||+|||+++.||..|++.++.+|++++ ++|+++++++|.+++ .|++.+++|++++++.+ ++|+
T Consensus 282 ~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~ 356 (374)
T 2iw1_A 282 AAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYA-DTQD 356 (374)
T ss_dssp SSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-HHSC
T ss_pred CCCCHHHHHHHCCCCEEEECCCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHHHH-HHHH
T ss_conf 755699999977998898269980444306983199679999899999999997----19499999999999999-8753
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999871
Q 003657 753 WKIYSQRLLTLTGVY 767 (805)
Q Consensus 753 w~~~a~~ll~Ly~~~ 767 (805)
|...++++.++++.+
T Consensus 357 ~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 357 LYSLPEKAADIITGG 371 (374)
T ss_dssp CSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 899999999999986
Done!