Query 003658
Match_columns 805
No_of_seqs 210 out of 575
Neff 4.6
Searched_HMMs 29240
Date Tue Mar 26 18:03:37 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003658.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1708-1712//hhsearch_pdb/003658hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 1.0 1 1 109.6 6.5 104 211-352 2-108 (111)
2 4gne_A Histone-lysine N-methyl 1.0 1 1 92.5 6.1 78 212-318 11-89 (107)
3 2kwj_A Zinc finger protein DPF 1.0 1 1 90.9 2.1 79 217-317 2-92 (114)
4 3v43_A Histone acetyltransfera 1.0 1 1 88.5 3.5 90 277-381 6-97 (112)
5 3v43_A Histone acetyltransfera 1.0 1 1 85.4 7.1 83 214-317 3-96 (112)
6 2ysm_A Myeloid/lymphoid or mix 1.0 1 1 85.0 6.8 82 276-381 7-89 (111)
7 3u5n_A E3 ubiquitin-protein li 1.0 1 1 81.3 3.6 53 211-275 2-54 (207)
8 2kwj_A Zinc finger protein DPF 1.0 1 1 78.6 5.8 88 278-381 3-93 (114)
9 3o36_A Transcription intermedi 1.0 1 1 77.3 4.0 51 213-275 1-51 (184)
10 4gne_A Histone-lysine N-methyl 1.0 1 1 77.0 6.6 89 277-412 16-104 (107)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=109.62 Aligned_cols=104 Identities=24% Similarity=0.676 Sum_probs=79.4
Q ss_pred CCCCCCCCCCCCCCCCCE---EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 457886543213778960---10275323355453125865311136986211398996106545224754233355688
Q 003658 211 KDENYFAVCAICDDGGDV---TFCDGRCLRSFHATITAGKNALCQSLGYTQAQIDAVPNFLCQNCVYQEHQCFACGMLGS 287 (805)
Q Consensus 211 eed~~d~vC~IC~~gGeL---L~CdG~C~RsFH~~C~~g~~s~C~sLglt~~ev~~~~~w~C~eC~~gqhqCFvCgklGs 287 (805)
....++++|.+|+++|++ |+|+ .|.++||+.|+. +...++ +.+.|+|++|. .|++|++.+.
T Consensus 2 s~~~~~~~C~~C~~~g~~~~ll~C~-~C~~~~H~~Cl~----------~~~~~~-~~~~W~C~~C~----~C~~C~~~~~ 65 (111)
T 2ysm_A 2 SSGSSGANCAVCDSPGDLLDQFFCT-TCGQHYHGMCLD----------IAVTPL-KRAGWQCPECK----VCQNCKQSGE 65 (111)
T ss_dssp CCCCCCSCBTTTCCCCCTTTSEECS-SSCCEECTTTTT----------CCCCTT-TSTTCCCTTTC----CCTTTCCCSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCEECC-CCCCCCCHHHHC----------CCCCCC-CCCCCCCCCCC----CCCCCCCCCC
T ss_conf 8889979995789988875885999-999773967708----------865544-56686587678----2623476589
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC
Q ss_conf 89999984100467875887841000025899934578999998626993115895444576775
Q 003658 288 SDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVHKCFVCQQSE 352 (805)
Q Consensus 288 sD~~s~~eV~kCsv~~CGkfYH~~CI~~~l~p~~~~~a~eL~kkV~~~~~F~CPlH~C~~Ck~se 352 (805)
...++.| ..|.+.||..|+.+.+.. +. ...|.|| .|..|+.+.
T Consensus 66 -----~~~ll~C--d~C~~~yH~~Cl~ppl~~------------~P-~g~W~C~--~C~~c~~g~ 108 (111)
T 2ysm_A 66 -----DSKMLVC--DTCDKGYHTFCLQPVMKS------------VP-TNGWKCK--NCRICISGP 108 (111)
T ss_dssp -----CTTEEEC--SSSCCEEEGGGSSSCCSS------------CC-SSCCCCH--HHHCCSCSC
T ss_pred -----CCCEEEC--CCCCCHHHHHHCCCCCCC------------CC-CCCCCCC--CCCCCCCCC
T ss_conf -----8776589--999808869865876566------------88-9882992--882728789
No 2
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=1.00 E-value=1 Score=92.46 Aligned_cols=78 Identities=24% Similarity=0.507 Sum_probs=60.8
Q ss_pred CCCCCCCCCCCCCCCCEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5788654321377896010275-323355453125865311136986211398996106545224754233355688899
Q 003658 212 DENYFAVCAICDDGGDVTFCDG-RCLRSFHATITAGKNALCQSLGYTQAQIDAVPNFLCQNCVYQEHQCFACGMLGSSDK 290 (805)
Q Consensus 212 ed~~d~vC~IC~~gGeLL~CdG-~C~RsFH~~C~~g~~s~C~sLglt~~ev~~~~~w~C~eC~~gqhqCFvCgklGssD~ 290 (805)
...++++|.+|.++|+||+||+ .|+++||+.| ++++.. +.+.|+|+.|. |.+|++..
T Consensus 11 ~~~~~~~C~~C~~~G~ll~CD~~~Cp~~fH~~C----------l~L~~~---P~g~W~Cp~c~-----C~~C~k~~---- 68 (107)
T 4gne_A 11 KQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLC----------LNLTQP---PYGKWECPWHQ-----CDECSSAA---- 68 (107)
T ss_dssp CCSSCSSCTTTCCCSEEEECCSTTCCCEECTGG----------GTCSSC---CSSCCCCGGGB-----CTTTCSBC----
T ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC----------CCCCCC---CCCCEECCCCC-----CCCCCCCC----
T ss_conf 688979998479978475779999992652251----------868757---99888898999-----88177989----
Q ss_pred CCCCCEEECCCCCCCCCCCCCHHCCCCC
Q ss_conf 9998410046787588784100002589
Q 003658 291 SSSQEVFPCVSATCGQFYHPECVSKLLH 318 (805)
Q Consensus 291 ~s~~eV~kCsv~~CGkfYH~~CI~~~l~ 318 (805)
-+.| ..|.+.||..|+...+.
T Consensus 69 -----~~~C--~~Cp~sfC~~c~~g~l~ 89 (107)
T 4gne_A 69 -----VSFC--EFCPHSFCKDHEKGALV 89 (107)
T ss_dssp -----CEEC--SSSSCEECTTTCTTSCE
T ss_pred -----CCCC--CCCCCCHHHHCCCCCCE
T ss_conf -----8674--77871011211587311
No 3
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=1.00 E-value=1 Score=90.86 Aligned_cols=79 Identities=25% Similarity=0.624 Sum_probs=52.4
Q ss_pred CCCCCCCCC----------CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 543213778----------9601027532335545312586531113698621--1398996106545224754233355
Q 003658 217 AVCAICDDG----------GDVTFCDGRCLRSFHATITAGKNALCQSLGYTQA--QIDAVPNFLCQNCVYQEHQCFACGM 284 (805)
Q Consensus 217 ~vC~IC~~g----------GeLL~CdG~C~RsFH~~C~~g~~s~C~sLglt~~--ev~~~~~w~C~eC~~gqhqCFvCgk 284 (805)
++|.+|.++ |+||.|++ |+++||+.|+. ++.. +..+.+.|+|++|. .|.+|+.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~-C~~~~H~~Cl~----------~~~~~~~~~~~~~W~C~~C~----~C~~C~~ 66 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCAD-CGRSGHPTCLQ----------FTLNMTEAVKTYKWQCIECK----SCILCGT 66 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSS-SCCEECTTTTT----------CCHHHHHHHHHTTCCCGGGC----CCTTTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECC-CCCCCCHHHCC----------CHHHHHHCCCCCCCCCCCCC----CCCCCCC
T ss_conf 808658897534446799999869298-99832321387----------84664311687751756627----3375634
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCC
Q ss_conf 688899999841004678758878410000258
Q 003658 285 LGSSDKSSSQEVFPCVSATCGQFYHPECVSKLL 317 (805)
Q Consensus 285 lGssD~~s~~eV~kCsv~~CGkfYH~~CI~~~l 317 (805)
.+. .+.++.| ..|.+.||..|+.+.+
T Consensus 67 ~~~-----~~~ll~C--d~C~~~yH~~Cl~ppl 92 (114)
T 2kwj_A 67 SEN-----DDQLLFC--DDCDRGYHMYCLNPPV 92 (114)
T ss_dssp CTT-----TTTEEEC--SSSCCEEETTTSSSCC
T ss_pred CCC-----CCCEEEC--CCCCCCCCCCCCCCCC
T ss_conf 688-----8745774--8989410250459874
No 4
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=1.00 E-value=1 Score=88.52 Aligned_cols=90 Identities=23% Similarity=0.576 Sum_probs=42.2
Q ss_pred CCCCCCCCCCCCCCC-CCCCEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCC-CCCCCCCCCCC
Q ss_conf 542333556888999-9984100467875887841000025899934578999998626993115895-44457677546
Q 003658 277 HQCFACGMLGSSDKS-SSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVH-KCFVCQQSEDM 354 (805)
Q Consensus 277 hqCFvCgklGssD~~-s~~eV~kCsv~~CGkfYH~~CI~~~l~p~~~~~a~eL~kkV~~~~~F~CPlH-~C~~Ck~sedk 354 (805)
+.|.+|...+..... .+++++.| ..|++.||+.|+...+ ++...+ ....|.||.. .|.+|+..+.
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C--~~C~~~~H~~Cl~~~~---------~~~~~~-~~~~W~C~~C~~C~vC~~~~~- 72 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISC--ADCGNSGHPSCLKFSP---------ELTVRV-KALRWQCIECKTCSSCRDQGK- 72 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEEC--TTTCCEECHHHHTCCH---------HHHHHH-HTSCCCCTTTCCBTTTCCCCC-
T ss_pred CCCCCCCCCHHHCCCCCCHHCEEH--HHCCCCCCCCHHCCCH---------HHHHHH-HCCCCCCCCCCCCCCCCCCCC-
T ss_conf 613103893342768991116375--3449988970353888---------999875-424653011775446668688-
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 626554164532661212456898865
Q 003658 355 NVEDLQLAICRRCPKAYHRKCLPTEIT 381 (805)
Q Consensus 355 ~~~~~qLi~C~RCPkAYH~kCLP~~i~ 381 (805)
.+.+|+.|+.|+++||..||.+++.
T Consensus 73 --~~~~ll~Cd~C~~~yH~~Cl~p~l~ 97 (112)
T 3v43_A 73 --NADNMLFCDSCDRGFHMECCDPPLT 97 (112)
T ss_dssp --TTCCCEECTTTCCEECGGGCSSCCS
T ss_pred --CCCCEEECCCCCCEEECCCCCCCCC
T ss_conf --8565687489989156635899989
No 5
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=1.00 E-value=1 Score=85.42 Aligned_cols=83 Identities=20% Similarity=0.538 Sum_probs=62.8
Q ss_pred CCCCCCCCCCC---------CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 88654321377---------89601027532335545312586531113698621--13989961065452247542333
Q 003658 214 NYFAVCAICDD---------GGDVTFCDGRCLRSFHATITAGKNALCQSLGYTQA--QIDAVPNFLCQNCVYQEHQCFAC 282 (805)
Q Consensus 214 ~~d~vC~IC~~---------gGeLL~CdG~C~RsFH~~C~~g~~s~C~sLglt~~--ev~~~~~w~C~eC~~gqhqCFvC 282 (805)
....+|.+|.. +|+||.|++ |.++||+.|+ +++.. +.-+...|+|++|. .|.+|
T Consensus 3 ~p~~~C~~C~~~~~~~~~g~~~~Ll~C~~-C~~~~H~~Cl----------~~~~~~~~~~~~~~W~C~~C~----~C~vC 67 (112)
T 3v43_A 3 EPIPICSFCLGTKEQNREKKPEELISCAD-CGNSGHPSCL----------KFSPELTVRVKALRWQCIECK----TCSSC 67 (112)
T ss_dssp CCCSSBTTTCCCTTCCTTSCCCCCEECTT-TCCEECHHHH----------TCCHHHHHHHHTSCCCCTTTC----CBTTT
T ss_pred CCCCCCCCCCCCHHHCCCCCCHHCEEHHH-CCCCCCCCHH----------CCCHHHHHHHHCCCCCCCCCC----CCCCC
T ss_conf 66761310389334276899111637534-4998897035----------388899987542465301177----54466
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCC
Q ss_conf 55688899999841004678758878410000258
Q 003658 283 GMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLL 317 (805)
Q Consensus 283 gklGssD~~s~~eV~kCsv~~CGkfYH~~CI~~~l 317 (805)
+..|. ..+.++.| ..|.+.||..|+.+.+
T Consensus 68 ~~~~~----~~~~ll~C--d~C~~~yH~~Cl~p~l 96 (112)
T 3v43_A 68 RDQGK----NADNMLFC--DSCDRGFHMECCDPPL 96 (112)
T ss_dssp CCCCC----TTCCCEEC--TTTCCEECGGGCSSCC
T ss_pred CCCCC----CCCCEEEC--CCCCCEEECCCCCCCC
T ss_conf 68688----85656874--8998915663589998
No 6
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=85.00 Aligned_cols=82 Identities=32% Similarity=0.738 Sum_probs=65.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCC-CCCCCCCCCCC
Q ss_conf 75423335568889999984100467875887841000025899934578999998626993115895-44457677546
Q 003658 276 EHQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVH-KCFVCQQSEDM 354 (805)
Q Consensus 276 qhqCFvCgklGssD~~s~~eV~kCsv~~CGkfYH~~CI~~~l~p~~~~~a~eL~kkV~~~~~F~CPlH-~C~~Ck~sedk 354 (805)
...|.+|+..|. ..+++.| ..|++.||+.|+.....+. ....|.||.. .|.+|+..++.
T Consensus 7 ~~~C~~C~~~g~-----~~~ll~C--~~C~~~~H~~Cl~~~~~~~-------------~~~~W~C~~C~~C~~C~~~~~~ 66 (111)
T 2ysm_A 7 GANCAVCDSPGD-----LLDQFFC--TTCGQHYHGMCLDIAVTPL-------------KRAGWQCPECKVCQNCKQSGED 66 (111)
T ss_dssp CSCBTTTCCCCC-----TTTSEEC--SSSCCEECTTTTTCCCCTT-------------TSTTCCCTTTCCCTTTCCCSCC
T ss_pred CCCCCCCCCCCC-----CCCCEEC--CCCCCCCCHHHHCCCCCCC-------------CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 799957899888-----7588599--9999773967708865544-------------5668658767826234765898
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 626554164532661212456898865
Q 003658 355 NVEDLQLAICRRCPKAYHRKCLPTEIT 381 (805)
Q Consensus 355 ~~~~~qLi~C~RCPkAYH~kCLP~~i~ 381 (805)
.+|+.|+.|+++||..||.+++.
T Consensus 67 ----~~ll~Cd~C~~~yH~~Cl~ppl~ 89 (111)
T 2ysm_A 67 ----SKMLVCDTCDKGYHTFCLQPVMK 89 (111)
T ss_dssp ----TTEEECSSSCCEEEGGGSSSCCS
T ss_pred ----CCEEECCCCCCHHHHHHCCCCCC
T ss_conf ----77658999980886986587656
No 7
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=1.00 E-value=1 Score=81.32 Aligned_cols=53 Identities=26% Similarity=0.619 Sum_probs=42.1
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 45788654321377896010275323355453125865311136986211398996106545224
Q 003658 211 KDENYFAVCAICDDGGDVTFCDGRCLRSFHATITAGKNALCQSLGYTQAQIDAVPNFLCQNCVYQ 275 (805)
Q Consensus 211 eed~~d~vC~IC~~gGeLL~CdG~C~RsFH~~C~~g~~s~C~sLglt~~ev~~~~~w~C~eC~~g 275 (805)
+++.++++|.+|++||+||+||| |.++||..|+.+ +++.. +.+.|+|+.|...
T Consensus 2 ~~d~~~~~C~~C~~~g~ll~Cd~-C~~~~H~~Cl~p--------~l~~~---p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 2 DDDPNEDWCAVCQNGGDLLCCEK-CPKVFHLTCHVP--------TLLSF---PSGDWICTFCRDI 54 (207)
T ss_dssp -CCSSCSSBTTTCCCEEEEECSS-SSCEECTTTSSS--------CCSSC---CSSCCCCTTTSCS
T ss_pred CCCCCCCCCCCCCCCCCEEECCC-CCCCCCCCCCCC--------CCCCC---CCCCEEECCEECC
T ss_conf 87888898988899993677699-998438715899--------98888---9988786842686
No 8
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=1.00 E-value=1 Score=78.60 Aligned_cols=88 Identities=30% Similarity=0.640 Sum_probs=62.1
Q ss_pred CCCCCCCCCCCCC--CCCCCEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCC-CCCCCCCCCCC
Q ss_conf 4233355688899--99984100467875887841000025899934578999998626993115895-44457677546
Q 003658 278 QCFACGMLGSSDK--SSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVH-KCFVCQQSEDM 354 (805)
Q Consensus 278 qCFvCgklGssD~--~s~~eV~kCsv~~CGkfYH~~CI~~~l~p~~~~~a~eL~kkV~~~~~F~CPlH-~C~~Ck~sedk 354 (805)
.|.+|...+..++ ...++++.| ..|++.||+.|+...+ .+...+. ...|.||.. .|.+|+..++.
T Consensus 3 ~C~~C~~~~~~n~k~g~~~~Li~C--~~C~~~~H~~Cl~~~~---------~~~~~~~-~~~W~C~~C~~C~~C~~~~~~ 70 (114)
T 2kwj_A 3 YCDFCLGGSNMNKKSGRPEELVSC--ADCGRSGHPTCLQFTL---------NMTEAVK-TYKWQCIECKSCILCGTSEND 70 (114)
T ss_dssp CCSSSCCBTTBCTTTCCCCCCEEC--SSSCCEECTTTTTCCH---------HHHHHHH-HTTCCCGGGCCCTTTTCCTTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCCCHHHCCCHH---------HHHHCCC-CCCCCCCCCCCCCCCCCCCCC
T ss_conf 086588975344467999998692--9899832321387846---------6431168-775175662733756346888
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 626554164532661212456898865
Q 003658 355 NVEDLQLAICRRCPKAYHRKCLPTEIT 381 (805)
Q Consensus 355 ~~~~~qLi~C~RCPkAYH~kCLP~~i~ 381 (805)
..|+.|+.|+++||..||.+++.
T Consensus 71 ----~~ll~Cd~C~~~yH~~Cl~ppl~ 93 (114)
T 2kwj_A 71 ----DQLLFCDDCDRGYHMYCLNPPVA 93 (114)
T ss_dssp ----TTEEECSSSCCEEETTTSSSCCS
T ss_pred ----CCEEECCCCCCCCCCCCCCCCCC
T ss_conf ----74577489894102504598746
No 9
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=1.00 E-value=1 Score=77.30 Aligned_cols=51 Identities=24% Similarity=0.595 Sum_probs=40.4
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 788654321377896010275323355453125865311136986211398996106545224
Q 003658 213 ENYFAVCAICDDGGDVTFCDGRCLRSFHATITAGKNALCQSLGYTQAQIDAVPNFLCQNCVYQ 275 (805)
Q Consensus 213 d~~d~vC~IC~~gGeLL~CdG~C~RsFH~~C~~g~~s~C~sLglt~~ev~~~~~w~C~eC~~g 275 (805)
+.++++|.+|++||+||+||+ |.++||..|+.+ +++.. +.+.|+|+.|...
T Consensus 1 ~~~~~~C~~C~~~g~ll~Cd~-C~~~~H~~C~~p--------~l~~~---p~~~W~C~~C~~~ 51 (184)
T 3o36_A 1 SPNEDWCAVCQNGGELLCCEK-CPKVFHLSCHVP--------TLTNF---PSGEWICTFCRDL 51 (184)
T ss_dssp CCSCSSCTTTCCCSSCEECSS-SSCEECTTTSSS--------CCSSC---CSSCCCCTTTSCS
T ss_pred CCCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCC--------CCCCC---CCCCEECCCCCCC
T ss_conf 999995411799990566299-995308113689--------87879---9988789255686
No 10
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=1.00 E-value=1 Score=76.97 Aligned_cols=89 Identities=25% Similarity=0.565 Sum_probs=66.0
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCC
Q ss_conf 54233355688899999841004678758878410000258999345789999986269931158954445767754662
Q 003658 277 HQCFACGMLGSSDKSSSQEVFPCVSATCGQFYHPECVSKLLHPDNESLAEELRERIAAGESFTCPVHKCFVCQQSEDMNV 356 (805)
Q Consensus 277 hqCFvCgklGssD~~s~~eV~kCsv~~CGkfYH~~CI~~~l~p~~~~~a~eL~kkV~~~~~F~CPlH~C~~Ck~sedk~~ 356 (805)
..|++|+. +++++.|....|.+.||..||..... . ...|.||.|.|..|+....
T Consensus 16 ~~C~~C~~--------~G~ll~CD~~~Cp~~fH~~Cl~L~~~--------------P-~g~W~Cp~c~C~~C~k~~~--- 69 (107)
T 4gne_A 16 DYCFQCGD--------GGELVMCDKKDCPKAYHLLCLNLTQP--------------P-YGKWECPWHQCDECSSAAV--- 69 (107)
T ss_dssp SSCTTTCC--------CSEEEECCSTTCCCEECTGGGTCSSC--------------C-SSCCCCGGGBCTTTCSBCC---
T ss_pred CCCCCCCC--------CCCEEEECCCCCCCCCCCCCCCCCCC--------------C-CCCEECCCCCCCCCCCCCC---
T ss_conf 99984799--------78475779999992652251868757--------------9-9888898999881779898---
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 65541645326612124568988654455511444313113789955698278965
Q 003658 357 EDLQLAICRRCPKAYHRKCLPTEITFSDADENNFQRAWVDLLPNNRILIYCLEHKI 412 (805)
Q Consensus 357 ~~~qLi~C~RCPkAYH~kCLP~~i~f~~~~~e~~~raW~~ll~~~riLI~C~kH~i 412 (805)
+.|..||.|||..|++..+.... . ...++|..|..
T Consensus 70 -----~~C~~Cp~sfC~~c~~g~l~~~~---------------~-~~~~c~~~~~~ 104 (107)
T 4gne_A 70 -----SFCEFCPHSFCKDHEKGALVPSA---------------L-EGRLCCSEHDP 104 (107)
T ss_dssp -----EECSSSSCEECTTTCTTSCEECT---------------T-TTCEECTTSCT
T ss_pred -----CCCCCCCCCHHHHCCCCCCEECC---------------C-CCCEECCCCCC
T ss_conf -----67477871011211587311027---------------8-89666677888
Done!