Query 003661
Match_columns 805
No_of_seqs 384 out of 3624
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 03:38:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003661.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003661hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 3E-200 7E-205 1743.5 73.9 805 1-805 2-809 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 4E-193 9E-198 1683.8 76.1 780 24-803 1-784 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 2E-171 5E-176 1394.2 31.1 548 7-554 1-550 (550)
4 TIGR02468 sucrsPsyn_pln sucros 100.0 4.1E-59 8.9E-64 558.6 40.7 455 275-767 168-671 (1050)
5 KOG0853 Glycosyltransferase [C 100.0 5.6E-60 1.2E-64 526.4 25.7 491 193-794 1-495 (495)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 1.3E-51 2.8E-56 470.4 41.5 426 277-764 1-438 (439)
7 PLN02939 transferase, transfer 100.0 4.8E-46 1E-50 440.1 48.9 514 199-766 383-966 (977)
8 PRK00654 glgA glycogen synthas 100.0 1.3E-43 2.9E-48 407.5 39.7 427 277-766 1-462 (466)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 7.8E-43 1.7E-47 392.4 39.0 399 279-766 1-401 (405)
10 TIGR02095 glgA glycogen/starch 100.0 6.6E-42 1.4E-46 394.1 41.2 434 277-766 1-472 (473)
11 cd03800 GT1_Sucrose_synthase T 100.0 3.5E-41 7.6E-46 375.0 40.3 397 278-761 1-397 (398)
12 PLN02316 synthase/transferase 100.0 4.1E-41 9E-46 405.1 43.2 408 275-766 586-1033(1036)
13 PRK14098 glycogen synthase; Pr 100.0 8.6E-41 1.9E-45 385.5 40.3 440 274-766 4-485 (489)
14 PRK10307 putative glycosyl tra 100.0 1.5E-40 3.3E-45 375.6 39.3 395 277-766 1-407 (412)
15 cd03791 GT1_Glycogen_synthase_ 100.0 4E-40 8.7E-45 379.0 40.4 432 278-765 1-475 (476)
16 cd03796 GT1_PIG-A_like This fa 100.0 4.7E-40 1E-44 370.2 37.1 365 278-766 1-367 (398)
17 PRK14099 glycogen synthase; Pr 100.0 1.2E-39 2.6E-44 375.5 40.7 435 276-766 3-478 (485)
18 TIGR02149 glgA_Coryne glycogen 100.0 2.1E-38 4.4E-43 353.4 39.4 378 277-766 1-386 (388)
19 cd04962 GT1_like_5 This family 100.0 3E-38 6.4E-43 348.9 39.8 366 277-766 1-370 (371)
20 PRK15427 colanic acid biosynth 100.0 2.1E-38 4.5E-43 358.3 37.8 281 403-766 116-405 (406)
21 PLN02871 UDP-sulfoquinovose:DA 100.0 1.7E-38 3.7E-43 365.1 37.4 374 274-766 56-434 (465)
22 PRK15484 lipopolysaccharide 1, 100.0 5.7E-38 1.2E-42 351.8 38.6 375 275-767 1-378 (380)
23 cd03818 GT1_ExpC_like This fam 100.0 3.3E-37 7.2E-42 346.7 38.3 366 316-761 15-395 (396)
24 cd03805 GT1_ALG2_like This fam 100.0 7E-37 1.5E-41 341.5 35.8 386 277-760 1-392 (392)
25 TIGR03088 stp2 sugar transfera 100.0 1.8E-36 4E-41 336.9 37.1 365 278-766 3-372 (374)
26 cd05844 GT1_like_7 Glycosyltra 100.0 2.2E-36 4.8E-41 333.5 33.9 280 404-762 81-366 (367)
27 PRK15179 Vi polysaccharide bio 100.0 4.1E-36 8.9E-41 355.3 37.7 460 200-766 203-693 (694)
28 cd04955 GT1_like_6 This family 100.0 1.6E-35 3.5E-40 325.0 39.2 361 278-765 1-363 (363)
29 KOG1111 N-acetylglucosaminyltr 100.0 7E-37 1.5E-41 322.3 26.3 362 277-764 1-364 (426)
30 PRK15490 Vi polysaccharide bio 100.0 3.9E-35 8.4E-40 333.4 39.6 394 295-766 169-575 (578)
31 cd03792 GT1_Trehalose_phosphor 100.0 1.8E-35 3.9E-40 329.6 35.3 287 403-766 83-371 (372)
32 cd03821 GT1_Bme6_like This fam 100.0 6.2E-35 1.3E-39 317.1 37.2 372 278-761 1-374 (375)
33 cd03819 GT1_WavL_like This fam 100.0 2.5E-35 5.5E-40 322.9 33.3 346 298-755 8-354 (355)
34 cd03799 GT1_amsK_like This is 100.0 8.3E-34 1.8E-38 310.1 37.1 271 404-760 78-355 (355)
35 cd03794 GT1_wbuB_like This fam 100.0 1.4E-33 3.1E-38 307.4 37.7 387 278-761 1-394 (394)
36 cd03795 GT1_like_4 This family 100.0 1.3E-33 2.9E-38 308.7 37.4 354 278-757 1-357 (357)
37 cd03813 GT1_like_3 This family 100.0 5.7E-35 1.2E-39 336.8 27.8 292 404-765 172-475 (475)
38 cd03814 GT1_like_2 This family 100.0 1.5E-33 3.2E-38 307.1 36.8 363 278-765 1-364 (364)
39 cd03801 GT1_YqgM_like This fam 100.0 4.1E-33 9E-38 299.8 39.1 374 278-765 1-374 (374)
40 cd03802 GT1_AviGT4_like This f 100.0 2.8E-33 6.1E-38 304.2 37.1 333 277-765 1-335 (335)
41 cd03822 GT1_ecORF704_like This 100.0 5.4E-33 1.2E-37 303.3 39.2 358 278-765 1-366 (366)
42 cd04951 GT1_WbdM_like This fam 100.0 3E-33 6.5E-38 306.3 37.1 358 278-765 1-359 (360)
43 cd03817 GT1_UGDG_like This fam 100.0 4.3E-33 9.4E-38 303.0 37.8 370 278-765 1-372 (374)
44 cd03807 GT1_WbnK_like This fam 100.0 5.3E-33 1.1E-37 300.8 35.1 363 278-765 1-365 (365)
45 cd03812 GT1_CapH_like This fam 100.0 2.4E-33 5.1E-38 307.6 32.2 347 278-749 1-348 (358)
46 cd03816 GT1_ALG1_like This fam 100.0 6.3E-33 1.4E-37 314.6 36.3 389 275-761 2-411 (415)
47 PRK09922 UDP-D-galactose:(gluc 100.0 1.6E-33 3.5E-38 312.9 30.4 267 404-765 83-354 (359)
48 PLN02846 digalactosyldiacylgly 100.0 8.7E-33 1.9E-37 313.0 35.6 373 275-767 3-392 (462)
49 cd03825 GT1_wcfI_like This fam 100.0 1.2E-32 2.5E-37 302.2 33.9 342 277-765 1-363 (365)
50 cd03806 GT1_ALG11_like This fa 100.0 1.8E-32 3.9E-37 311.2 35.3 379 279-758 3-418 (419)
51 cd03820 GT1_amsD_like This fam 100.0 4.4E-32 9.6E-37 291.1 35.7 345 278-761 1-347 (348)
52 PLN02949 transferase, transfer 100.0 3.1E-32 6.8E-37 311.7 35.8 395 271-766 28-456 (463)
53 cd03808 GT1_cap1E_like This fa 100.0 7.9E-32 1.7E-36 290.4 36.5 356 278-761 1-358 (359)
54 cd03798 GT1_wlbH_like This fam 100.0 1.9E-31 4.1E-36 288.4 38.4 284 403-765 91-375 (377)
55 cd03809 GT1_mtfB_like This fam 100.0 1.7E-32 3.7E-37 299.2 30.4 364 278-761 1-364 (365)
56 cd03823 GT1_ExpE7_like This fa 100.0 9.9E-32 2.1E-36 291.6 35.3 354 278-765 1-358 (359)
57 PRK10125 putative glycosyl tra 100.0 4.6E-32 1E-36 306.3 32.0 278 403-766 92-404 (405)
58 TIGR03087 stp1 sugar transfera 100.0 2.1E-32 4.6E-37 308.0 26.4 283 404-765 103-395 (397)
59 cd03811 GT1_WabH_like This fam 100.0 5.2E-31 1.1E-35 282.9 32.9 351 278-752 1-352 (353)
60 TIGR02918 accessory Sec system 100.0 1.7E-31 3.7E-36 308.3 30.9 279 403-765 209-498 (500)
61 cd04946 GT1_AmsK_like This fam 100.0 1.2E-30 2.6E-35 295.2 31.2 276 403-761 125-406 (407)
62 COG0297 GlgA Glycogen synthase 100.0 2E-29 4.3E-34 285.9 34.8 438 277-767 1-478 (487)
63 cd04949 GT1_gtfA_like This fam 100.0 2.1E-29 4.5E-34 279.8 30.0 287 388-760 84-372 (372)
64 PLN02275 transferase, transfer 100.0 5E-29 1.1E-33 278.6 30.3 318 316-725 23-370 (371)
65 cd03804 GT1_wbaZ_like This fam 100.0 3.3E-29 7.2E-34 276.3 24.7 263 404-760 82-350 (351)
66 PLN02501 digalactosyldiacylgly 100.0 6.1E-28 1.3E-32 277.0 34.2 271 404-766 433-709 (794)
67 PHA01630 putative group 1 glyc 100.0 1.7E-28 3.8E-33 269.9 26.2 258 411-767 52-331 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 1.2E-26 2.7E-31 264.3 31.1 335 403-766 146-586 (590)
69 PRK00726 murG undecaprenyldiph 99.9 1.8E-25 3.9E-30 247.8 31.5 343 277-765 2-356 (357)
70 cd03788 GT1_TPS Trehalose-6-Ph 99.9 9.5E-26 2.1E-30 258.9 28.3 318 397-762 124-457 (460)
71 PHA01633 putative glycosyl tra 99.9 4.9E-25 1.1E-29 241.2 26.9 224 469-761 89-334 (335)
72 cd03785 GT1_MurG MurG is an N- 99.9 2.7E-24 5.9E-29 236.9 30.9 325 298-758 8-349 (350)
73 TIGR01133 murG undecaprenyldip 99.9 3.7E-24 8E-29 235.6 29.5 314 316-757 19-345 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 2.4E-23 5.2E-28 238.1 28.8 318 395-762 118-452 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 2.8E-23 6.2E-28 236.1 29.0 284 405-765 124-418 (425)
76 PRK13609 diacylglycerol glucos 99.9 2.2E-22 4.7E-27 225.3 26.7 263 404-766 103-371 (380)
77 PF00534 Glycos_transf_1: Glyc 99.9 4.7E-23 1E-27 204.1 16.3 160 567-746 12-172 (172)
78 cd04950 GT1_like_1 Glycosyltra 99.9 7.7E-21 1.7E-25 212.8 31.7 267 402-765 99-370 (373)
79 PLN03063 alpha,alpha-trehalose 99.9 4.2E-21 9.1E-26 232.3 26.5 322 394-766 137-477 (797)
80 PLN02605 monogalactosyldiacylg 99.9 1.4E-20 3.1E-25 211.3 27.9 264 404-765 99-380 (382)
81 cd01635 Glycosyltransferase_GT 99.9 6.7E-20 1.5E-24 186.2 25.6 121 575-710 109-229 (229)
82 TIGR02094 more_P_ylases alpha- 99.9 2.2E-19 4.7E-24 210.5 30.8 345 397-764 153-598 (601)
83 PRK14501 putative bifunctional 99.9 3.5E-20 7.6E-25 224.1 23.9 322 395-766 124-462 (726)
84 COG0438 RfaG Glycosyltransfera 99.8 6.5E-19 1.4E-23 186.7 27.4 290 406-766 84-376 (381)
85 PRK13608 diacylglycerol glucos 99.8 4.7E-19 1E-23 199.8 25.4 262 404-765 103-370 (391)
86 TIGR00236 wecB UDP-N-acetylglu 99.8 5.3E-18 1.1E-22 189.0 22.4 273 404-762 85-363 (365)
87 TIGR02398 gluc_glyc_Psyn gluco 99.8 7.7E-17 1.7E-21 184.3 29.1 313 405-762 132-478 (487)
88 PRK09814 beta-1,6-galactofuran 99.8 4E-17 8.6E-22 180.2 23.5 245 405-759 63-324 (333)
89 PRK00025 lpxB lipid-A-disaccha 99.8 1.4E-16 3E-21 178.2 26.7 249 404-747 84-356 (380)
90 KOG1387 Glycosyltransferase [C 99.8 6.5E-16 1.4E-20 163.0 29.7 386 277-764 44-456 (465)
91 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 7.1E-17 1.5E-21 179.0 22.9 251 404-739 87-344 (363)
92 cd04299 GT1_Glycogen_Phosphory 99.7 1.1E-15 2.5E-20 182.4 28.7 341 398-764 241-687 (778)
93 PLN03064 alpha,alpha-trehalose 99.7 4.8E-15 1E-19 179.5 28.6 317 395-763 222-558 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 5.1E-15 1.1E-19 171.8 27.4 170 569-763 318-518 (519)
95 PF13692 Glyco_trans_1_4: Glyc 99.6 4.7E-15 1E-19 140.9 9.4 130 570-726 2-133 (135)
96 PF05693 Glycogen_syn: Glycoge 99.5 3.9E-13 8.5E-18 153.4 22.1 334 405-766 143-581 (633)
97 KOG2941 Beta-1,4-mannosyltrans 99.5 5.8E-12 1.3E-16 133.7 28.3 377 318-761 33-436 (444)
98 TIGR00215 lpxB lipid-A-disacch 99.5 2.2E-12 4.9E-17 145.3 26.5 250 404-745 88-364 (385)
99 PF13524 Glyco_trans_1_2: Glyc 99.4 4.7E-12 1E-16 113.1 10.8 92 665-762 1-92 (92)
100 PF00982 Glyco_transf_20: Glyc 99.3 5.2E-10 1.1E-14 128.6 24.6 312 405-764 141-472 (474)
101 PF13579 Glyco_trans_4_4: Glyc 99.3 1.2E-11 2.6E-16 119.0 8.6 160 300-525 1-160 (160)
102 PRK12446 undecaprenyldiphospho 99.3 7.2E-09 1.6E-13 115.6 31.8 325 299-763 11-348 (352)
103 PF13439 Glyco_transf_4: Glyco 99.2 5.6E-11 1.2E-15 116.4 12.0 168 297-531 9-176 (177)
104 COG0707 MurG UDP-N-acetylgluco 99.2 3.9E-08 8.5E-13 109.4 33.3 252 404-761 90-352 (357)
105 PRK10117 trehalose-6-phosphate 99.2 2.8E-09 6E-14 121.5 24.6 319 397-765 116-452 (474)
106 PLN02205 alpha,alpha-trehalose 99.2 6E-09 1.3E-13 127.4 26.3 311 407-763 203-548 (854)
107 TIGR02919 accessory Sec system 99.1 7.5E-09 1.6E-13 118.1 24.7 144 570-747 282-426 (438)
108 cd03784 GT1_Gtf_like This fami 99.0 9.4E-08 2E-12 107.9 26.0 124 567-726 237-370 (401)
109 COG0380 OtsA Trehalose-6-phosp 99.0 1.1E-07 2.4E-12 108.1 26.3 325 394-764 137-477 (486)
110 PF09314 DUF1972: Domain of un 99.0 1.4E-08 3.1E-13 102.3 15.7 180 276-527 1-185 (185)
111 TIGR01426 MGT glycosyltransfer 98.9 1.2E-06 2.6E-11 98.9 30.0 111 636-763 273-389 (392)
112 PF08323 Glyco_transf_5: Starc 98.9 5.1E-09 1.1E-13 110.9 9.9 185 278-488 1-231 (245)
113 TIGR03492 conserved hypothetic 98.8 1.4E-06 3.1E-11 98.8 26.9 271 403-761 91-393 (396)
114 PF13528 Glyco_trans_1_3: Glyc 98.8 8.8E-07 1.9E-11 96.7 22.0 116 568-723 191-315 (318)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 1.6E-06 3.5E-11 97.3 23.4 266 404-763 92-364 (365)
116 COG1519 KdtA 3-deoxy-D-manno-o 98.6 7.7E-05 1.7E-09 83.1 29.9 156 570-749 231-403 (419)
117 PF13477 Glyco_trans_4_2: Glyc 98.5 1.5E-06 3.3E-11 82.9 13.9 123 316-480 15-139 (139)
118 PF02350 Epimerase_2: UDP-N-ac 98.4 2.1E-05 4.6E-10 87.7 22.2 268 405-764 67-345 (346)
119 TIGR00661 MJ1255 conserved hyp 98.4 4.6E-05 9.9E-10 83.9 23.4 69 637-715 228-302 (321)
120 PHA03392 egt ecdysteroid UDP-g 98.4 0.00027 5.8E-09 82.8 29.9 154 570-761 297-461 (507)
121 PF13844 Glyco_transf_41: Glyc 98.3 1.5E-05 3.3E-10 91.0 17.4 184 557-766 274-466 (468)
122 TIGR03590 PseG pseudaminic aci 98.3 5.7E-05 1.2E-09 81.7 20.6 97 570-694 171-268 (279)
123 PF04007 DUF354: Protein of un 98.1 0.00093 2E-08 74.0 23.8 63 655-725 242-307 (335)
124 PLN02448 UDP-glycosyltransfera 98.0 0.0084 1.8E-07 69.6 31.0 127 568-726 273-413 (459)
125 COG1819 Glycosyl transferases, 98.0 0.00052 1.1E-08 78.3 20.1 158 569-765 237-400 (406)
126 PF02684 LpxB: Lipid-A-disacch 97.7 0.0054 1.2E-07 69.0 23.1 241 403-738 80-346 (373)
127 KOG3742 Glycogen synthase [Car 97.7 0.00013 2.8E-09 80.6 9.3 99 662-761 500-607 (692)
128 COG3914 Spy Predicted O-linked 97.7 0.00092 2E-08 76.7 16.2 185 559-771 421-616 (620)
129 COG0381 WecB UDP-N-acetylgluco 97.6 0.032 7E-07 62.1 26.1 274 404-766 91-370 (383)
130 COG0763 LpxB Lipid A disacchar 97.5 0.0096 2.1E-07 66.1 20.4 199 403-692 83-289 (381)
131 COG4641 Uncharacterized protei 97.5 0.007 1.5E-07 66.8 18.8 192 517-765 161-360 (373)
132 PRK14986 glycogen phosphorylas 97.1 0.0064 1.4E-07 73.6 14.9 154 559-721 532-703 (815)
133 PRK01021 lpxB lipid-A-disaccha 97.1 0.051 1.1E-06 64.2 21.6 196 404-692 309-513 (608)
134 PLN02208 glycosyltransferase f 97.0 1 2.2E-05 52.2 32.0 94 638-745 311-415 (442)
135 COG0058 GlgP Glucan phosphoryl 97.0 0.013 2.8E-07 70.2 15.8 144 561-712 478-630 (750)
136 PRK10017 colanic acid biosynth 96.9 1 2.3E-05 51.8 29.6 104 628-746 297-406 (426)
137 PLN02562 UDP-glycosyltransfera 96.9 1.4 3E-05 51.2 32.1 88 637-738 327-419 (448)
138 PF12000 Glyco_trans_4_3: Gkyc 96.9 0.011 2.4E-07 59.2 11.5 111 394-531 56-170 (171)
139 PLN02554 UDP-glycosyltransfera 96.8 1.6 3.5E-05 51.1 30.8 88 638-738 342-447 (481)
140 PRK02797 4-alpha-L-fucosyltran 96.7 0.31 6.8E-06 53.0 22.1 167 570-766 145-316 (322)
141 PLN03007 UDP-glucosyltransfera 96.7 1.9 4.2E-05 50.4 35.8 78 637-726 344-438 (482)
142 PRK14985 maltodextrin phosphor 96.6 0.007 1.5E-07 73.1 9.4 152 559-720 518-688 (798)
143 cd04300 GT1_Glycogen_Phosphory 96.6 0.021 4.6E-07 69.3 13.5 153 559-720 519-689 (797)
144 PLN02863 UDP-glucoronosyl/UDP- 96.6 2.3 5E-05 49.8 32.4 118 638-768 343-473 (477)
145 TIGR02093 P_ylase glycogen/sta 96.5 0.021 4.5E-07 69.2 12.2 154 559-721 516-687 (794)
146 PLN02173 UDP-glucosyl transfer 96.4 2.8 6.1E-05 48.6 33.7 80 637-726 316-406 (449)
147 PF00343 Phosphorylase: Carboh 96.2 0.23 5E-06 59.8 19.0 151 559-718 433-601 (713)
148 PLN00414 glycosyltransferase f 96.2 3.5 7.7E-05 47.8 31.7 93 640-746 314-417 (446)
149 PLN02210 UDP-glucosyl transfer 96.1 4 8.7E-05 47.5 34.2 133 569-726 269-413 (456)
150 PF08288 PIGA: PIGA (GPI ancho 96.0 0.025 5.4E-07 49.9 7.2 70 358-438 14-85 (90)
151 PLN02410 UDP-glucoronosyl/UDP- 96.0 4.4 9.5E-05 47.1 31.5 93 637-744 323-421 (451)
152 COG4671 Predicted glycosyl tra 95.8 2.4 5.3E-05 46.9 22.7 133 568-726 218-363 (400)
153 PRK14089 ipid-A-disaccharide s 95.7 0.2 4.2E-06 56.1 14.6 91 570-692 168-260 (347)
154 PF06258 Mito_fiss_Elm1: Mitoc 95.7 1.1 2.3E-05 49.5 20.1 110 568-696 145-259 (311)
155 PLN02670 transferase, transfer 95.6 6.3 0.00014 46.0 32.4 111 640-765 341-464 (472)
156 KOG1050 Trehalose-6-phosphate 95.5 0.94 2E-05 55.2 20.4 154 568-727 274-439 (732)
157 COG1817 Uncharacterized protei 95.5 1.2 2.7E-05 48.3 18.6 57 663-726 253-312 (346)
158 PF07429 Glyco_transf_56: 4-al 95.4 1.3 2.8E-05 49.1 19.0 123 569-704 183-308 (360)
159 PLN02992 coniferyl-alcohol glu 94.9 10 0.00022 44.4 30.5 78 639-726 339-425 (481)
160 PF11440 AGT: DNA alpha-glucos 94.9 2.8 6E-05 45.0 18.7 146 567-726 177-351 (355)
161 COG3980 spsG Spore coat polysa 94.5 1.3 2.8E-05 47.6 15.6 140 569-744 158-305 (318)
162 PF04464 Glyphos_transf: CDP-G 94.4 1.1 2.3E-05 50.3 15.9 134 559-726 183-334 (369)
163 PLN02152 indole-3-acetate beta 93.4 19 0.00042 41.9 30.3 142 569-726 261-415 (455)
164 COG3660 Predicted nucleoside-d 93.3 6.5 0.00014 42.0 17.7 112 567-697 159-276 (329)
165 PF05159 Capsule_synth: Capsul 92.7 7 0.00015 41.9 18.0 102 567-692 114-224 (269)
166 PF00201 UDPGT: UDP-glucoronos 92.6 0.35 7.7E-06 56.4 8.5 137 569-741 276-418 (500)
167 PLN02555 limonoid glucosyltran 92.5 26 0.00057 41.1 31.7 80 637-726 336-427 (480)
168 PF04101 Glyco_tran_28_C: Glyc 91.6 0.11 2.4E-06 51.3 2.3 91 638-743 55-155 (167)
169 PF11997 DUF3492: Domain of un 91.5 2.8 6E-05 45.3 13.0 79 404-482 171-255 (268)
170 cd03789 GT1_LPS_heptosyltransf 89.0 2.7 5.9E-05 45.1 10.5 98 572-692 124-223 (279)
171 PLN03004 UDP-glycosyltransfera 88.0 6.4 0.00014 45.8 13.2 84 638-737 334-429 (451)
172 PLN02167 UDP-glycosyltransfera 86.6 8.9 0.00019 44.9 13.5 79 638-726 340-432 (475)
173 TIGR02195 heptsyl_trn_II lipop 86.6 5.8 0.00012 43.8 11.5 102 567-692 171-276 (334)
174 PRK10422 lipopolysaccharide co 86.4 5 0.00011 44.8 11.0 103 569-692 183-287 (352)
175 PRK05562 precorrin-2 dehydroge 86.1 31 0.00068 36.2 15.8 121 663-790 86-213 (223)
176 PF01075 Glyco_transf_9: Glyco 85.8 5.8 0.00012 41.5 10.5 103 568-692 104-208 (247)
177 COG2327 WcaK Polysaccharide py 85.6 71 0.0015 36.3 26.9 88 638-738 266-357 (385)
178 PLN03015 UDP-glucosyl transfer 82.3 1.1E+02 0.0024 35.9 31.7 77 640-726 337-424 (470)
179 TIGR02201 heptsyl_trn_III lipo 82.3 10 0.00023 41.9 11.2 102 570-692 182-285 (344)
180 TIGR02193 heptsyl_trn_I lipopo 81.4 14 0.0003 40.4 11.6 99 569-692 179-279 (319)
181 PF08660 Alg14: Oligosaccharid 80.5 10 0.00022 38.1 9.2 64 403-485 90-159 (170)
182 TIGR03609 S_layer_CsaB polysac 80.4 84 0.0018 34.0 17.2 86 585-692 190-275 (298)
183 PF10087 DUF2325: Uncharacteri 80.1 3.8 8.2E-05 37.0 5.5 84 604-701 2-90 (97)
184 PLN02764 glycosyltransferase f 78.9 71 0.0015 37.2 16.7 77 640-726 319-405 (453)
185 COG0859 RfaF ADP-heptose:LPS h 78.4 18 0.00038 40.2 11.3 98 570-692 176-276 (334)
186 PLN00164 glucosyltransferase; 77.3 36 0.00077 40.0 13.8 77 640-726 341-429 (480)
187 KOG4626 O-linked N-acetylgluco 75.9 33 0.00071 40.9 12.4 193 559-778 750-950 (966)
188 PRK10964 ADP-heptose:LPS hepto 74.5 25 0.00054 38.6 11.1 96 572-692 181-278 (322)
189 PF06925 MGDG_synth: Monogalac 70.2 23 0.0005 35.1 8.7 59 404-486 88-151 (169)
190 PRK10916 ADP-heptose:LPS hepto 69.0 33 0.00072 38.1 10.6 99 571-692 182-286 (348)
191 PF03401 TctC: Tripartite tric 68.6 68 0.0015 34.6 12.5 152 570-745 78-245 (274)
192 PF01975 SurE: Survival protei 67.0 55 0.0012 33.7 10.8 38 277-340 1-38 (196)
193 PLN02207 UDP-glycosyltransfera 65.9 2.5E+02 0.0055 32.9 17.3 79 638-726 332-424 (468)
194 PF04413 Glycos_transf_N: 3-De 65.6 30 0.00066 35.1 8.6 70 405-489 95-166 (186)
195 PF12038 DUF3524: Domain of un 65.1 22 0.00048 35.5 7.1 110 404-526 58-168 (168)
196 PF10933 DUF2827: Protein of u 62.4 74 0.0016 35.7 11.2 162 561-747 180-345 (364)
197 KOG1192 UDP-glucuronosyl and U 62.4 1.9E+02 0.004 33.6 15.6 159 570-762 278-451 (496)
198 TIGR01470 cysG_Nterm siroheme 62.3 2E+02 0.0042 29.7 16.2 126 659-786 67-201 (205)
199 PRK00676 hemA glutamyl-tRNA re 56.7 2.9E+02 0.0064 30.9 14.9 125 600-747 173-305 (338)
200 PLN02534 UDP-glycosyltransfera 55.6 3.1E+02 0.0066 32.4 15.6 77 638-726 344-442 (491)
201 COG1618 Predicted nucleotide k 55.5 2.2E+02 0.0048 28.7 12.0 37 272-329 1-37 (179)
202 COG2910 Putative NADH-flavin r 54.8 12 0.00027 38.0 3.4 34 277-339 1-34 (211)
203 COG1703 ArgK Putative periplas 52.8 2.1E+02 0.0045 31.7 12.3 110 301-438 63-176 (323)
204 PF04230 PS_pyruv_trans: Polys 49.5 3E+02 0.0066 28.1 15.6 95 582-693 189-283 (286)
205 PRK13932 stationary phase surv 45.2 4E+02 0.0087 28.7 13.2 35 402-436 88-133 (257)
206 PF03016 Exostosin: Exostosin 43.8 56 0.0012 35.1 6.7 70 652-722 227-299 (302)
207 PF05686 Glyco_transf_90: Glyc 43.1 63 0.0014 36.9 7.2 83 682-768 233-319 (395)
208 TIGR00087 surE 5'/3'-nucleotid 42.7 4.4E+02 0.0094 28.1 13.0 36 402-437 83-129 (244)
209 smart00672 CAP10 Putative lipo 42.4 1.1E+02 0.0023 33.0 8.4 85 680-768 162-250 (256)
210 TIGR03642 cas_csx13 CRISPR-ass 41.7 92 0.002 29.7 6.9 101 316-428 9-116 (124)
211 COG1647 Esterase/lipase [Gener 41.1 1.4E+02 0.003 31.6 8.5 34 404-437 83-116 (243)
212 KOG0832 Mitochondrial/chloropl 38.1 3.3E+02 0.0071 28.9 10.6 105 569-701 107-212 (251)
213 PRK03359 putative electron tra 37.3 1.3E+02 0.0028 32.4 8.0 34 405-438 112-149 (256)
214 PF15024 Glyco_transf_18: Glyc 37.2 1.2E+02 0.0027 36.0 8.4 154 570-767 277-456 (559)
215 PRK12342 hypothetical protein; 35.8 1.2E+02 0.0025 32.7 7.4 34 405-438 109-146 (254)
216 PLN00016 RNA-binding protein; 32.7 44 0.00095 37.6 3.9 20 316-339 71-90 (378)
217 PF05728 UPF0227: Uncharacteri 32.6 3.7E+02 0.008 27.4 10.2 31 408-438 61-91 (187)
218 TIGR00715 precor6x_red precorr 32.4 2.8E+02 0.006 29.8 9.6 84 629-724 165-253 (256)
219 TIGR02990 ectoine_eutA ectoine 32.3 4E+02 0.0088 28.2 10.8 34 403-436 179-214 (239)
220 COG0569 TrkA K+ transport syst 31.6 2.5E+02 0.0053 29.4 9.0 34 404-437 65-102 (225)
221 KOG2884 26S proteasome regulat 30.3 4.3E+02 0.0093 27.8 9.9 117 570-726 108-227 (259)
222 PF10649 DUF2478: Protein of u 30.2 93 0.002 31.0 5.1 40 655-694 86-131 (159)
223 PRK13398 3-deoxy-7-phosphohept 29.6 7.4E+02 0.016 26.7 12.4 111 573-694 28-142 (266)
224 PF08672 APC2: Anaphase promot 29.5 31 0.00068 28.5 1.4 36 5-40 13-51 (60)
225 PRK04020 rps2P 30S ribosomal p 29.3 2.1E+02 0.0046 29.7 7.8 113 580-714 47-161 (204)
226 PLN03228 methylthioalkylmalate 28.9 1E+03 0.023 28.2 14.4 110 131-257 18-144 (503)
227 PF03033 Glyco_transf_28: Glyc 28.2 44 0.00095 31.3 2.5 28 299-338 8-35 (139)
228 TIGR01568 A_thal_3678 uncharac 28.1 98 0.0021 26.2 4.1 51 220-271 7-59 (66)
229 PRK10840 transcriptional regul 27.9 6.3E+02 0.014 25.4 12.7 109 602-726 4-124 (216)
230 PLN02764 glycosyltransferase f 27.9 6E+02 0.013 29.7 12.0 25 405-432 108-132 (453)
231 PF09752 DUF2048: Uncharacteri 27.7 5.1E+02 0.011 29.2 10.8 33 404-436 173-205 (348)
232 COG4195 Phage-related replicat 27.5 71 0.0015 32.5 3.8 60 243-319 7-66 (208)
233 KOG0780 Signal recognition par 27.4 1E+03 0.022 27.5 16.0 175 573-766 157-342 (483)
234 PLN02657 3,8-divinyl protochlo 27.3 61 0.0013 36.8 3.8 52 259-339 43-94 (390)
235 PLN02534 UDP-glycosyltransfera 27.2 7E+02 0.015 29.5 12.6 27 301-339 20-46 (491)
236 COG2236 Predicted phosphoribos 26.8 1.4E+02 0.003 30.7 5.9 49 383-432 8-56 (192)
237 PRK06988 putative formyltransf 26.1 3.6E+02 0.0077 29.8 9.4 13 317-329 17-29 (312)
238 PRK04531 acetylglutamate kinas 25.9 1.6E+02 0.0035 33.7 6.9 74 567-660 34-108 (398)
239 PF04844 Ovate: Transcriptiona 25.4 1.1E+02 0.0023 25.4 3.8 48 221-270 2-51 (59)
240 COG0496 SurE Predicted acid ph 24.9 3.9E+02 0.0085 28.7 9.0 34 405-438 83-127 (252)
241 TIGR00732 dprA DNA protecting 24.1 4.7E+02 0.01 27.3 9.4 124 582-719 82-217 (220)
242 PF13407 Peripla_BP_4: Peripla 23.8 4.2E+02 0.0091 27.2 9.2 39 657-695 50-89 (257)
243 PRK08057 cobalt-precorrin-6x r 23.1 6.2E+02 0.014 27.0 10.3 23 674-696 203-225 (248)
244 PF03358 FMN_red: NADPH-depend 23.0 1.1E+02 0.0024 29.3 4.3 38 277-336 1-38 (152)
245 PRK13935 stationary phase surv 23.0 9.6E+02 0.021 25.8 12.7 35 402-436 83-128 (253)
246 PRK05331 putative phosphate ac 23.0 9.8E+02 0.021 26.7 12.2 52 579-644 9-61 (334)
247 KOG1021 Acetylglucosaminyltran 22.9 6.4E+02 0.014 29.5 11.2 96 653-754 335-433 (464)
248 CHL00194 ycf39 Ycf39; Provisio 22.9 73 0.0016 34.7 3.3 34 277-339 1-34 (317)
249 cd01020 TroA_b Metal binding p 22.6 4.4E+02 0.0095 28.1 9.1 89 656-749 47-136 (264)
250 PLN02293 adenine phosphoribosy 22.5 2.2E+02 0.0049 29.0 6.5 30 404-433 61-90 (187)
251 PRK13933 stationary phase surv 22.4 9.8E+02 0.021 25.7 12.8 35 402-436 84-129 (253)
252 COG1797 CobB Cobyrinic acid a, 21.9 3.1E+02 0.0068 31.8 7.9 20 418-437 101-120 (451)
253 COG3171 Uncharacterized protei 21.7 81 0.0018 29.4 2.7 33 230-262 25-61 (119)
254 PRK11519 tyrosine kinase; Prov 21.6 1.5E+03 0.032 28.1 14.6 45 393-437 623-669 (719)
255 PRK05331 putative phosphate ac 21.6 7.9E+02 0.017 27.4 11.1 34 573-609 179-212 (334)
256 TIGR01012 Sa_S2_E_A ribosomal 21.5 3.8E+02 0.0083 27.7 7.9 104 580-701 41-147 (196)
257 TIGR01286 nifK nitrogenase mol 21.5 1.1E+03 0.025 27.9 13.0 98 581-693 192-316 (515)
258 COG2204 AtoC Response regulato 21.5 1.1E+03 0.025 27.6 12.6 108 602-727 5-121 (464)
259 PF10649 DUF2478: Protein of u 21.5 8.2E+02 0.018 24.4 12.1 107 316-437 18-132 (159)
260 TIGR01278 DPOR_BchB light-inde 21.0 1.4E+03 0.031 27.0 13.7 62 622-691 175-238 (511)
261 COG0482 TrmU Predicted tRNA(5- 21.0 2.3E+02 0.005 32.0 6.6 106 299-438 11-126 (356)
262 CHL00200 trpA tryptophan synth 20.7 1.1E+03 0.023 25.5 12.3 122 569-711 91-231 (263)
263 KOG2452 Formyltetrahydrofolate 20.7 89 0.0019 35.8 3.3 38 277-345 1-38 (881)
264 PRK06732 phosphopantothenate-- 20.5 1.3E+02 0.0028 31.6 4.4 30 294-338 20-49 (229)
265 COG1519 KdtA 3-deoxy-D-manno-o 20.4 7.7E+02 0.017 28.5 10.6 102 570-692 50-152 (419)
266 PF05908 DUF867: Protein of un 20.2 79 0.0017 32.5 2.6 24 277-313 27-50 (194)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=3.1e-200 Score=1743.52 Aligned_cols=805 Identities=78% Similarity=1.265 Sum_probs=780.1
Q ss_pred CcccccccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhh--HhhhcccCCCcHHHHHhhcceee
Q 003661 1 MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAI 78 (805)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 78 (805)
|++++|+|++||+|+++++|++|||+|++||+||+++||++|++|||+++|+++. +.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 5668999999999999999999999999999999999999999999999999994 44577899999999999999999
Q ss_pred EcCCeEEEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCcCCCCceeeeeccccccCCCCCCCCCCCCchhh
Q 003661 79 VLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVE 158 (805)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (805)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+|+||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhHhhhhhhcCCCCCcchHHHHHhhcccCCeeeecccCCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCccc
Q 003661 159 FLNRHLSAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLER 238 (805)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (805)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCcHHHHHHHHHHHHHhhcCCCcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHH
Q 003661 239 GWGDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEML 318 (805)
Q Consensus 239 gw~~~~~r~~~~~~~l~~~~~~p~~~~~~~f~~~~~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa 318 (805)
||||||+||+|||++|+++|++|||++||+|++||||+|||+|||+||+|+|.+++|+||||||++||+|||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHH
Q 003661 319 LRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEI 398 (805)
Q Consensus 319 ~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i 398 (805)
++|+++||+|+|+|+|+||.+++..|+.|++++|.+.++++++|+|+||++.++++++|++|+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEe
Q 003661 399 AKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (805)
Q Consensus 399 ~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt 478 (805)
.++.+++||+||+|||+++++|.++++++|+|+|+|+|++++.|+..++.+|+..++.|+|++++++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 88777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhh
Q 003661 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 479 ~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 558 (805)
+|+++++++++.++||++|.+|+||++|++++||+++++|++|||||+|...|.|+....++.+.+++.|++++|++++.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888889999999999999999
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCC-CCCccHHHHHHHHHHHHHHHHcCCC
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQYKLN 637 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~-~~~~d~ee~~e~~~l~~li~~l~L~ 637 (805)
++++|++.++++|+|+++||+++.||++.|++|++++.+..++++|+|||++.+ ..+.+.++.+++++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 999998878889999999999999999999999999988888999999999843 4445667777888999999999999
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~ 717 (805)
++|+|+|.+.+..+.+++++++++++|+||+||.+|+||++++||||||+|||||+.||+.|+|.+|++|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999999778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhchhhhhcchhHHhhhhHHHHHHHhhhhhhh
Q 003661 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLA 797 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~~~~w~~~~~~~~~~~~~y~~~~~~~~~~~~~ 797 (805)
+|++|.+++++|+.||+.|++|+++|++++.++|||+.++++++++..+||||+++++++|++++|||||||+||||+||
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 801 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELA 801 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHh
Confidence 99999999988999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccCC
Q 003661 798 ESVPLAVE 805 (805)
Q Consensus 798 ~~~~~~~~ 805 (805)
++||+++|
T Consensus 802 ~~~~~~~~ 809 (815)
T PLN00142 802 KTVPLAVD 809 (815)
T ss_pred hcCCcccc
Confidence 99999976
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=4.4e-193 Score=1683.80 Aligned_cols=780 Identities=74% Similarity=1.213 Sum_probs=754.5
Q ss_pred HHHHHHHHHHHHhcCCCccchhHHHHHHHhhh--HhhhcccCCCcHHHHHhhcceeeEcCCeEEEEEcCCCceEEEEEEe
Q 003661 24 RNEILALLSRIEGKGKGILQNHQLIAEFESIS--EENRKHLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVN 101 (805)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (805)
|++|++||+||+++||++||+|||+++|++++ +.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 68999999999999999999999999999995 3346689999999999999999999999999999999999999999
Q ss_pred cCcceeeecCHHHHhhhcccccCCcCCCCceeeeeccccccCCCCCCCCCCCCchhhhhhHhhhhhhcCCCCCcchHHHH
Q 003661 102 VHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEF 181 (805)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (805)
++||+||+|||+|||+|||+|||++.+++++|||||+|||++||+||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccCCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCC
Q 003661 182 LRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAP 261 (805)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p 261 (805)
||.|+|+|++|||||||+|+.+||++|++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+++|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCC
Q 003661 262 DPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPD 341 (805)
Q Consensus 262 ~~~~~~~f~~~~~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~ 341 (805)
||++||+|++||||+|||+|||+||+|+|.+++|.||||||++||+||||+||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccceeeecCccCeEEEEeccCcCCc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003661 342 AVGTTCGQRLEKVYGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA 420 (805)
Q Consensus 342 ~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~-~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva 420 (805)
..++.|+++.|.+.+++|++|+|+|+++..+ ++++|++|+++|||+..|+.++.+.+.++.+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 8899999999999999999999999999877 799999999999999999999999998877789999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhcccccccccccccc
Q 003661 421 SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAF 500 (805)
Q Consensus 421 ~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f 500 (805)
.++++++|+|+|+|+|++++.|+..++.+|...+.+|++++++++|.++++.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeecc
Q 003661 501 TLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLD 580 (805)
Q Consensus 501 ~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~ 580 (805)
|||++|++++||+++++|++|||||+|.+.|+|++...++....++.++.++|++++.++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888899999999999999999998889999999999999
Q ss_pred CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCC-CCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHH
Q 003661 581 RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 659 (805)
Q Consensus 581 ~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~-~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~l 659 (805)
+.||++.|++|+++++++.++++|+|||++.+ ..+.+.++.+++++++++++++++.++|+|+|.+.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999887778899999999865 45667788888999999999999999999999877677888999999
Q ss_pred HccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHH
Q 003661 660 CDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKI 739 (805)
Q Consensus 660 a~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~m 739 (805)
++++|+||+||++|+||++++||||||+|||||+.||+.|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhchhhhhcchhHHhhhhHHHHHHHhhhhhhhccCCcc
Q 003661 740 SLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 803 (805)
Q Consensus 740 s~~ar~~v~~~ysw~~~a~~ll~Ly~~~~~w~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 803 (805)
+++|++++.++|||+.++++++++..+||||+++++++|++++|||||||+|+|||||++||++
T Consensus 721 s~~a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=2.5e-171 Score=1394.17 Aligned_cols=548 Identities=72% Similarity=1.186 Sum_probs=472.5
Q ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHHHhcCCCccchhHHHHHHHhhhHhhhc--ccCCCcHHHHHhhcceeeEcCCeE
Q 003661 7 TRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK--HLTEGAFGEVLRATQEAIVLPPWV 84 (805)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 84 (805)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++++++++ +..+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 699999999999999999999999999999999999999999999999876655 557899999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecCHHHHhhhcccccCCcCCCCceeeeeccccccCCCCCCCCCCCCchhhhhhHhh
Q 003661 85 ALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKEELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHL 164 (805)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (805)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred hhhhcCCCCCcchHHHHHhhcccCCeeeecccCCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCcCCcH
Q 003661 165 SAKLFHDKESMHPLLEFLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTA 244 (805)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~~~ 244 (805)
|||||+|++++++||||||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHC
Q 003661 245 ERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ 324 (805)
Q Consensus 245 ~r~~~~~~~l~~~~~~p~~~~~~~f~~~~~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~ 324 (805)
+||+|||++|+++|+||||++||+|++||||+|+||++||||||+|+||+|+||||||++||+|||||||++|..+++.+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCC
Q 003661 325 GLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQG 404 (805)
Q Consensus 325 Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~ 404 (805)
|.+|.|+|+|+||.+|++.|++|++++|++.+++|++|+|+||++.+|++++|++|+++||||++|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHH
Q 003661 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 405 kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
+||+||+||++||++|+++++++|+|+|+|+|+++++||+.++++|+.++.+|||+|||++|.++|++||+|||||+|++
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcc
Q 003661 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYS 554 (805)
Q Consensus 485 ~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~ 554 (805)
+|+++.+|||++|++||||||||+++||++|+|||+|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
No 4
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=4.1e-59 Score=558.58 Aligned_cols=455 Identities=27% Similarity=0.469 Sum_probs=355.8
Q ss_pred CcceEEEEcccccccccCc-CC-CCCcccchhhhHHHHHHHHHHHHHHHHHCC--CceeeceeEEecCCCCC-CCCcccc
Q 003661 275 MVFNVVILTPHGYFAQDDV-LG-YPDTGGQVVYILDQVRALEDEMLLRIKQQG--LDITPQILIITRLLPDA-VGTTCGQ 349 (805)
Q Consensus 275 ~~~rI~iis~h~~~~~~~~-lG-~pdtGG~~vyv~d~araL~~eLa~~L~~~G--h~V~~~I~VvT~~~~~~-~g~~~~~ 349 (805)
+.|.|++||+||.|..+++ +| .+|||||++||. +||++|++.| |+|+ |+||.+.+. .+..|.+
T Consensus 168 ~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~ 235 (1050)
T TIGR02468 168 KKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGE 235 (1050)
T ss_pred CceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCC
Confidence 3588999999999998888 88 599999999999 5555668888 8999 999997643 3455666
Q ss_pred ceeee------------cCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHH-------Hc----CCCc
Q 003661 350 RLEKV------------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAK-------EL----QGKP 406 (805)
Q Consensus 350 ~~e~i------------~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~-------~~----~~kP 406 (805)
..|.+ ...+|++|+|+|+++.. +++++..+|||+..|+..+...+.+ +. ...|
T Consensus 236 p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~p 311 (1050)
T TIGR02468 236 PTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWP 311 (1050)
T ss_pred ccccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCC
Confidence 65433 34569999999998763 3577899999999999998887653 11 1249
Q ss_pred eEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCC----CChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 407 DLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYP----DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 407 DIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~----~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
|+||+|||+++.+|.++++.+++|+|+|+|++...|.. .+...+......|++..++.+|..+++.||.|||+|.+
T Consensus 312 DvIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~q 391 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQ 391 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHH
Confidence 99999999999999999999999999999999776643 22335566777899999999999999999999999999
Q ss_pred HHhhccccccccccccccccccceee-----ecCCCC---CCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcc
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRV-----VHGIDV---FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYS 554 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~-----~~gi~~---~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~ 554 (805)
+++ .||..|..|. |.++++ .+|++. +.+|+.|||||||.+.|.|......+... ..+.....
T Consensus 392 E~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~ 461 (1050)
T TIGR02468 392 EIE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAK 461 (1050)
T ss_pred HHH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---cccccccc
Confidence 987 3555555454 444433 344442 46799999999999999986433211000 00000000
Q ss_pred hh----hhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC--CeEEEEEeCCCCCCCccHHHHHHHHHHH
Q 003661 555 DV----ENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMY 628 (805)
Q Consensus 555 ~~----~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~d~ee~~e~~~l~ 628 (805)
+. ..-..++ .++++|+|+++||+++.||++.|++||+.+++..+ ++. +|+|++++.+........+..++.
T Consensus 462 ~~~~~~~~l~r~~--~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 462 PDPPIWSEIMRFF--TNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred ccchhhHHHHhhc--ccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHH
Confidence 00 0001122 26789999999999999999999999999876433 444 467876542111111234567788
Q ss_pred HHHHHcCCCCcEEEecCCCCcCChHHHHHHHHcc---CcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc
Q 003661 629 SLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT---KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK 705 (805)
Q Consensus 629 ~li~~l~L~~~V~flG~~~~~v~~~el~~~la~a---aDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~ 705 (805)
++++++++.++|.|+| .++.+++..+|+.+ +|+||+||++|+||++++||||||+|||||+.||+.|+|.++.
T Consensus 539 ~li~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~ 614 (1050)
T TIGR02468 539 KLIDKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLD 614 (1050)
T ss_pred HHHHHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCC
Confidence 9999999999999999 66678888888742 2799999999999999999999999999999999999999999
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003661 706 SGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 706 ~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
+|++++|.|++++|++|.+++ .|+++|++|+++|++++ ++|||+.++++|++.+...
T Consensus 615 nGlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 615 NGLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred cEEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 999999999999999997665 89999999999999998 5799999999999988754
No 5
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=5.6e-60 Score=526.37 Aligned_cols=491 Identities=42% Similarity=0.649 Sum_probs=434.2
Q ss_pred ecccCCCCHHHHHHHHHHHHHHhhcCCCCCCchHHHHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCCCcccHhHHhcc
Q 003661 193 MLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGR 272 (805)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p~~~~~~~f~~~ 272 (805)
|.||++++...+|+.+.+|+..++.. .+||+..|.+.+++.++++|||.++.+|..++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999888
Q ss_pred CCCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCcccccee
Q 003661 273 IPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLE 352 (805)
Q Consensus 273 ~~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e 352 (805)
++. ++|.||+||+++|+++++++|+.+|..+..+.+.+++++|++++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 455 8999999999999999999999999999999999999999999999988765 4556
Q ss_pred eecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003661 353 KVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (805)
Q Consensus 353 ~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v 432 (805)
...++.+++|+++|+ +++.+|+ +.+||++..|+ .+...+.+.+++ ||++|.++++.++.+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~----~~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPF----GILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEecc----chhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 667778999999999 4566777 88999999998 566778888777 999999999999999999999999999
Q ss_pred EEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhcccccccccccccccccc-ceeeecC
Q 003661 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPG-LYRVVHG 511 (805)
Q Consensus 433 ~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~-l~~~~~g 511 (805)
.+.|.++..+++..+.+|+.+...|+++++|+++...++++| ++++++++++.....++|+++..+++|+ .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999997 8999999
Q ss_pred CCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHH
Q 003661 512 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEW 591 (805)
Q Consensus 512 i~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA 591 (805)
+++|.++++++++|.|.+.+.|.-.. ++.. + ++
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~------~~~~----------------i---~~---------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTL------LHDS----------------I---PE---------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHh------hhcc----------------c---CC----------------------
Confidence 99999999999999998887762211 1000 0 00
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC
Q 003661 592 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 671 (805)
Q Consensus 592 ~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~ 671 (805)
...++.+++++|+. ..++.+.|+.+++++|+++++++++.++++|.-. .....+-|++++++..+|++|+.
T Consensus 305 -----~~~~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa~ 375 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPAN 375 (495)
T ss_pred -----CCCCceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCCC
Confidence 11245666666632 1346678999999999999999999765555532 33345669999998899999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH---HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003661 672 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE---QAAEILVDFFEKCKADPSYWDKISLGGLKRIE 748 (805)
Q Consensus 672 ~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e---~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 748 (805)
|.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.+ .+|+++ .+|..||++|.+|+++|+++|+
T Consensus 376 -E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~----~kl~~~p~l~~~~~~~G~~rV~ 449 (495)
T KOG0853|consen 376 -EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADAL----LKLRRDPELWARMGKNGLKRVK 449 (495)
T ss_pred -CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHH----HHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 444 355555 6677999999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHHhchhhhhcchhHHhhhhHHHHHHHhhhh
Q 003661 749 EKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYR 794 (805)
Q Consensus 749 ~~ysw~~~a~~ll~Ly~~~~~w~~~~~~~~~~~~~y~~~~~~~~~~ 794 (805)
+.|||+.+.+++.++...|.+|+.++...+...+||++|||+|.||
T Consensus 450 e~fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 450 EMFSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred HHHhHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999986
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=1.3e-51 Score=470.43 Aligned_cols=426 Identities=31% Similarity=0.560 Sum_probs=317.4
Q ss_pred ceEEEEcccccccccC-cCCC-CCcccchhhhHHHHHHHHHHHHHHHHHCCC--ceeeceeEEecCCCCCC-CCccccce
Q 003661 277 FNVVILTPHGYFAQDD-VLGY-PDTGGQVVYILDQVRALEDEMLLRIKQQGL--DITPQILIITRLLPDAV-GTTCGQRL 351 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~-~lG~-pdtGG~~vyv~d~araL~~eLa~~L~~~Gh--~V~~~I~VvT~~~~~~~-g~~~~~~~ 351 (805)
++|+++|+||+|+|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+..++.. +..+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4799999999999998 5774 99999999999 77777899997 999 9998765421 12233333
Q ss_pred eeecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003661 352 EKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ 431 (805)
Q Consensus 352 e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~ 431 (805)
+.+ .+|++++|+|+.+. .+.++...++++..|.....+.+.+ ...+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQ-QGHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHH-cCCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 35799999998643 2344566788887777666655443 234799999999888889999999999999
Q ss_pred EEEecCCCcccCC---CChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceee
Q 003661 432 CTIAHALEKTKYP---DSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRV 508 (805)
Q Consensus 432 v~t~H~l~~~k~~---~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~ 508 (805)
|+|.|++...+.. .....+..+...|.+......++.+++.+|.||++|.+++... +..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~------------------~~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQ------------------YAL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHH------------------HHh
Confidence 9999986432210 0111122222234444444567789999999999997654411 111
Q ss_pred ecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHH
Q 003661 509 VHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGL 588 (805)
Q Consensus 509 ~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~L 588 (805)
..+++ +.|+.+||||+|.+.|.|........ .+ ....+.++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~-----~~-------~~~~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETS-----EI-------DNLLAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccch-----hH-------HHHHHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 11333 67999999999999987753221100 00 000112333 5677899999999999999999
Q ss_pred HHHHHHhHccCCCeEEE-EEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHcc---Cc
Q 003661 589 VEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT---KG 664 (805)
Q Consensus 589 ieA~~~l~~~~~~v~Lv-IVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~a---aD 664 (805)
++|++++.+..+..+++ ++|+|++............+++.++++++++.++|+|+| .++.+++..+++.+ +|
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~~~D 342 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAARSRG 342 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhhcCC
Confidence 99998754333334454 567776532222223344566778899999999999999 66778898888842 29
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003661 665 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 665 vfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +||+.+++|+++|+
T Consensus 343 v~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 343 IFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRNGI 418 (439)
T ss_pred EEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999997766 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHH
Q 003661 745 KRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 745 ~~v~~~ysw~~~a~~ll~Ly 764 (805)
+++.++|||+.++++|+++.
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999875
No 7
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=4.8e-46 Score=440.12 Aligned_cols=514 Identities=17% Similarity=0.203 Sum_probs=368.2
Q ss_pred CCHHHHHHHHHHHHHHhhcCCCCCC--------chHHHHHhhhcCcccCcCCcHHHHHHHH---------HHHHHhhcCC
Q 003661 199 QNLNSLQHVLRKAEEYLTTVVPETP--------FSELALRFQEIGLERGWGDTAERALEMI---------QLLLDLLEAP 261 (805)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~gw~~~~~r~~~~~---------~~l~~~~~~p 261 (805)
++++.+|+.|.+..+.-++...+.| |+++..++++|=+++-.+.+.+..+..| ....++.+.+
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~~~ 462 (977)
T PLN02939 383 ESIKEFQDTLSKLKEESKKRSLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKN 462 (977)
T ss_pred HHHHHHHHHHHHHHhhhhcccccCchhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhcCc
Confidence 4688899999999999999888888 9999999999999999999999998888 4778889999
Q ss_pred CcccHhHHhccC----CCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEec
Q 003661 262 DPCTLETFLGRI----PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITR 337 (805)
Q Consensus 262 ~~~~~~~f~~~~----~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~ 337 (805)
|...+..|+.-. ...|||++||.--.| ...+||..-++. .|.++|+++||+|. |+++
T Consensus 463 ~~~~~~~~~~~~~~~~~~~mkILfVasE~aP-------~aKtGGLaDVv~--------sLPkAL~~~GhdV~----VIlP 523 (977)
T PLN02939 463 EREAVENFLKLTLSGTSSGLHIVHIAAEMAP-------VAKVGGLADVVS--------GLGKALQKKGHLVE----IVLP 523 (977)
T ss_pred hHHHHHHHHHhccCCCCCCCEEEEEEccccc-------ccccccHHHHHH--------HHHHHHHHcCCeEE----EEeC
Confidence 999998888632 245999999977654 357899999999 67777899999999 9999
Q ss_pred CCCCCCCCccc-c-----cee-eecC-----------ccCeEEEEeccCcCCcccccccccccchhh---HHH--HHHHH
Q 003661 338 LLPDAVGTTCG-Q-----RLE-KVYG-----------TKYSDILRVPFRTEKGVVRKWISRFEVWPY---LET--YTEDV 394 (805)
Q Consensus 338 ~~~~~~g~~~~-~-----~~e-~i~~-----------~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~---l~~--f~~~~ 394 (805)
.++........ . ... .+.+ .+|+.++.+....... +..+..++.+ .++ |+..+
T Consensus 524 ~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~~----fF~R~~iYg~~Dn~~RF~~FsrA 599 (977)
T PLN02939 524 KYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSK----FFWRAQYYGEHDDFKRFSYFSRA 599 (977)
T ss_pred CCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCchh----ccCCCCCCCCccHHHHHHHHHHH
Confidence 87533200000 0 000 0100 1234343332100000 1112222211 122 33333
Q ss_pred HHHHHHHcCCCceEEEEcCCCchHHHHHHHHH------cCCcEEEEecCCCcccC-CCChh-----hhhhcc--ccc--c
Q 003661 395 AVEIAKELQGKPDLIIGNYSDGNIVASLLAHK------LGVTQCTIAHALEKTKY-PDSDI-----YWKNLD--DKY--H 458 (805)
Q Consensus 395 ~~~i~~~~~~kPDIIh~h~~~~~lva~llar~------lgip~v~t~H~l~~~k~-~~s~~-----~~~~~~--~~y--~ 458 (805)
.-++....+.+|||||||.|..++++.++.+. .++|.|+|+|++..... +...+ .+..+. ... .
T Consensus 600 aLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~ 679 (977)
T PLN02939 600 ALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDN 679 (977)
T ss_pred HHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhc
Confidence 44455555679999999999998886655532 35799999999854432 11111 111110 000 0
Q ss_pred cchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHH
Q 003661 459 FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK 538 (805)
Q Consensus 459 ~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~ 538 (805)
+..++..-+.++..||.|+|+|+..++.+... +.+ .+.+. +.....|+.+|+||||.+.|.|..+..
T Consensus 680 ~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te-~G~------GL~~~------L~~~~~Kl~gIlNGID~e~wnPatD~~ 746 (977)
T PLN02939 680 AHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE-GGR------GLQDT------LKFHSKKFVGILNGIDTDTWNPSTDRF 746 (977)
T ss_pred cCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH-hcc------chHHH------hccccCCceEEecceehhhcCCccccc
Confidence 11222223346668999999999987754431 111 11111 122367999999999999999876431
Q ss_pred HhhhcCchhhHHhhcchhhhhhhhccccC-CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCcc
Q 003661 539 RRLKSFHPEIEELLYSDVENKEHLCVLKD-RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD 617 (805)
Q Consensus 539 ~r~~~~~~~i~~~l~~~~~~~~~~G~l~~-~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d 617 (805)
-...--...++....++...++++|+..+ ++.|+|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+..
T Consensus 747 L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGdGp~~---- 820 (977)
T PLN02939 747 LKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGSSPVP---- 820 (977)
T ss_pred cccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeCCCcH----
Confidence 11011112344455566777889999532 568999999999999999999999998765 47899999999751
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003661 618 LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 697 (805)
Q Consensus 618 ~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~ 697 (805)
...+.+.++++++++.++|.|+| ..+......+++ ++|+||+||++|+||++++|||+||+|+|++++||+
T Consensus 821 ----~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL 891 (977)
T PLN02939 821 ----HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL 891 (977)
T ss_pred ----HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC
Confidence 33467889999999999999999 555556677888 599999999999999999999999999999999999
Q ss_pred cccccc---------CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 698 AEIIVN---------GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 698 ~EiI~d---------g~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
.|+|.+ +.+||+++++|+++++++|.+++..+..||+.|++|+++++ .++|||+.++++|+++|+.
T Consensus 892 ~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~qYeeLY~~ 966 (977)
T PLN02939 892 NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQYEELYQR 966 (977)
T ss_pred cceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHH
Confidence 999976 57999999999999999999887666679999999998764 3789999999999999864
No 8
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=1.3e-43 Score=407.51 Aligned_cols=427 Identities=17% Similarity=0.223 Sum_probs=291.1
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCc-cccceeee-
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT-CGQRLEKV- 354 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~-~~~~~e~i- 354 (805)
|||++||.+.+|- ..+||+..+|. .|+++|+++||+|. |+|+.++...... -......+
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998743 35899999999 77777899999999 9998765432110 00001111
Q ss_pred --------cCccCeEEEEeccCcCCcccccccccccchhhH---HH--HHHHHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 003661 355 --------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPYL---ET--YTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421 (805)
Q Consensus 355 --------~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l---~~--f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~ 421 (805)
...+|+++++++.... ..+..++.+. .+ |...+..++....+.+|||||+|+|.+++++.
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~ 134 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPA 134 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHH
Confidence 1124677777764221 1111222221 22 22223334444455699999999999999988
Q ss_pred HHHHHc-----CCcEEEEecCCCcccCCCC-hhh-----hhhc-ccccccchhhhHhHHHhhcCCEEEecCHHHHhhccc
Q 003661 422 LLAHKL-----GVTQCTIAHALEKTKYPDS-DIY-----WKNL-DDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKD 489 (805)
Q Consensus 422 llar~l-----gip~v~t~H~l~~~k~~~s-~~~-----~~~~-~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~ 489 (805)
++++.. ++|+|+|+|++........ ... +..+ .....+...+...+.+++.||.|+|+|+...+.+..
T Consensus 135 ~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~ 214 (466)
T PRK00654 135 LLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITT 214 (466)
T ss_pred HHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhcc
Confidence 888663 7999999999754321100 000 0000 001111112233456789999999999987664432
Q ss_pred cccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCc-hhhHHhhcchhhhhhhhccccCC
Q 003661 490 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFH-PEIEELLYSDVENKEHLCVLKDR 568 (805)
Q Consensus 490 ~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~-~~i~~~l~~~~~~~~~~G~l~~~ 568 (805)
....| .+.+. +.....|+.+||||||.+.|.|..+..-. .... ..++....++...++++|+. ++
T Consensus 215 ~~~~~------gl~~~------~~~~~~ki~vI~NGid~~~~~p~~~~~~~-~~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 215 PEFGY------GLEGL------LRARSGKLSGILNGIDYDIWNPETDPLLA-ANYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred ccCCc------ChHHH------HHhcccCceEecCCCCccccCCccCcccc-cccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 11000 00000 01125689999999999999886432100 0000 01122222344567788884 34
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE-ecCCC
Q 003661 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW-ISSQM 647 (805)
Q Consensus 569 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~f-lG~~~ 647 (805)
+.++|+++||+.+.||++.|++|++++.+. +++|+|+|+|+. ...+++++++++++ +++.+ .|
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~---------~~~~~l~~l~~~~~--~~v~~~~g--- 344 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP---------ELEEAFRALAARYP--GKVGVQIG--- 344 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH---------HHHHHHHHHHHHCC--CcEEEEEe---
Confidence 789999999999999999999999998763 799999999853 23467888888886 45665 45
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHHHH
Q 003661 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQAAEI 721 (805)
Q Consensus 648 ~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg------~~G~li~p~d~e~lA~a 721 (805)
. +.+.+..+++ ++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|+++++++
T Consensus 345 -~-~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~ 421 (466)
T PRK00654 345 -Y-DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRA 421 (466)
T ss_pred -C-CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHH
Confidence 2 3344556777 5999999999999999999999999999999999999999988 89999999999999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 722 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 722 I~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
|.+++. +..|++.|.+|++++++ ++|||+.++++|+++|+.
T Consensus 422 i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 422 LRRALE-LYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHH-HhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 988763 33578889999988863 689999999999999964
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=7.8e-43 Score=392.44 Aligned_cols=399 Identities=21% Similarity=0.292 Sum_probs=297.8
Q ss_pred EEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCcc
Q 003661 279 VVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTK 358 (805)
Q Consensus 279 I~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~ 358 (805)
|++++.|+.|.. +++..+.||.++|+. +|+++|+++||+|+ |+|.......+. . ....+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~---~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP----V---VEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC----c---cccCC
Confidence 578888887542 355556799999999 77778899999999 999764322111 1 11224
Q ss_pred CeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003661 359 YSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 359 ~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l 438 (805)
++++.+++..+..+ .....+..++..|.....+.++.....+||+||+|.+.+++++.++++..++|+|+|.|+.
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 68888887654322 1111122222334434444444443458999999998778888888888999999999986
Q ss_pred CcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCc
Q 003661 439 EKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPK 518 (805)
Q Consensus 439 ~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~k 518 (805)
...+ ..++....... .......+...++.+|.|+++|+...+.+... .|.+ ..+
T Consensus 135 ~~~~----~~~~~~~~~~~-~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVK----NAALADGDTPE-PEARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHH----HHhccCCCCCc-hHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 4211 00110000000 00112235567899999999998766532211 1222 568
Q ss_pred EEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHcc
Q 003661 519 FNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKL 598 (805)
Q Consensus 519 i~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~ 598 (805)
+.+||||+|.+.|.|..... .+.++|+ ++++++|+++||+.+.||++.+++|++++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~-------------------~~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRAT-------------------ERARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHH-------------------HHHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 99999999998887653221 1244666 56789999999999999999999999999877
Q ss_pred CCC--eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003661 599 REL--VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 599 ~~~--v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fG 676 (805)
.++ ++|+|+|++... + ..+.++++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+||
T Consensus 248 ~~~~~~~l~ivG~~~~~-g-----~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~g 316 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-G-----LATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESFG 316 (405)
T ss_pred CCCcceEEEEEeCCCCC-c-----chHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCcC
Confidence 776 999999975321 0 023467888899999999999999 7778999999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003661 677 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIY 756 (805)
Q Consensus 677 ltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~ 756 (805)
++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.+
T Consensus 317 ~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~~ 391 (405)
T TIGR03449 317 LVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAAT 391 (405)
T ss_pred hHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999999999999999999999999997766 79999999999999987 78999999
Q ss_pred HHHHHHHHHH
Q 003661 757 SQRLLTLTGV 766 (805)
Q Consensus 757 a~~ll~Ly~~ 766 (805)
+++++++|+.
T Consensus 392 ~~~~~~~y~~ 401 (405)
T TIGR03449 392 ADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHH
Confidence 9999999863
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=6.6e-42 Score=394.13 Aligned_cols=434 Identities=16% Similarity=0.205 Sum_probs=296.0
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccc-----cce
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCG-----QRL 351 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~-----~~~ 351 (805)
|||+++|+..+|- -.+||+..++. .|+++|+++||+|. |+|+.++........ ...
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999997742 34899999999 67777799999999 999876543211000 000
Q ss_pred e--------e----ecCccCeEEEEeccCcCCcccccc--ccc---ccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCC
Q 003661 352 E--------K----VYGTKYSDILRVPFRTEKGVVRKW--ISR---FEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS 414 (805)
Q Consensus 352 e--------~----i~~~~~v~Ilrvp~~~~~~~l~~~--isr---~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~ 414 (805)
+ . ....+++.++++.... ++.+. +.. .+.......|...+. +++...+.+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~~r~~~f~~a~~-~~~~~~~~~~DiiH~hdw 137 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNAERFAFFSRAAA-ELLSGLGWQPDVVHAHDW 137 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHHhcCCCCCEEEECCc
Confidence 0 0 0111356666664321 00000 111 011101112333333 334444578999999999
Q ss_pred CchHHHHHHHHHcC---CcEEEEecCCCccc-CCCChhhh-----hhcc-cccccchhhhHhHHHhhcCCEEEecCHHHH
Q 003661 415 DGNIVASLLAHKLG---VTQCTIAHALEKTK-YPDSDIYW-----KNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 415 ~~~lva~llar~lg---ip~v~t~H~l~~~k-~~~s~~~~-----~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
.+++++.++++..+ +|.|+|+|++.... ++.....+ ..+. ..+.+...+...+.+++.||.|+|+|+..+
T Consensus 138 ~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~ 217 (473)
T TIGR02095 138 HTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYA 217 (473)
T ss_pred HHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHH
Confidence 99999998888776 99999999976432 11111111 0000 111111123345668899999999999876
Q ss_pred hhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhcc
Q 003661 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCV 564 (805)
Q Consensus 485 ~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~ 564 (805)
+.+.... + .+.+.+. +.....++.+|+||+|.+.|.|..+..-...--....+....++...++++|+
T Consensus 218 ~ei~~~~--~----~~~l~~~------l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl 285 (473)
T TIGR02095 218 REILTPE--F----GYGLDGV------LKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGL 285 (473)
T ss_pred HHhcCCc--C----CccchhH------HHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCC
Confidence 6443220 0 0001000 01125689999999999999886432100000000111222234456778898
Q ss_pred ccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003661 565 LKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 565 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG 644 (805)
..++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|+. ...+++++++.+++ +++.+.+
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~l~~~~~~~~--~~v~~~~ 352 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP---------ELEEALRELAERYP--GNVRVII 352 (473)
T ss_pred CccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH---------HHHHHHHHHHHHCC--CcEEEEE
Confidence 5555899999999999999999999999998763 599999999853 23466777777654 5788887
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHH
Q 003661 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG------KSGYHIDPYHGEQA 718 (805)
Q Consensus 645 ~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg------~~G~li~p~d~e~l 718 (805)
..+.+++..+++ ++|++++||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|.|++++
T Consensus 353 ----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~l 427 (473)
T TIGR02095 353 ----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427 (473)
T ss_pred ----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHH
Confidence 455667778888 5999999999999999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 719 AEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 719 A~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+++|.+++.....||+.|++|++++++ ++|||+.++++|+++|+.
T Consensus 428 a~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 428 LAALSRALRLYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHHh
Confidence 999988775444499999999998863 689999999999999963
No 11
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=3.5e-41 Score=375.01 Aligned_cols=397 Identities=33% Similarity=0.546 Sum_probs=302.7
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+|++.|+.+.. -.|.|+.||.+.++. +|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 5889999976532 245699999999999 67777799999999 998654332111 01122
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
.++.+++++..+.. ..++..+++++..|...+.+.+.... .+||+||+|++..+.++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRREG-GRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhcC-CCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 46778887764431 12333466676666666666555432 3899999999888888888899999999999998
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCC
Q 003661 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ 517 (805)
+...........|. +........+..+++.+|.|+++|......+.... +.. ..
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~-------------------~~~--~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSLY-------------------GAY--PR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHc-------------------ccc--cc
Confidence 75433221111111 11222334567789999999999987655322210 111 34
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003661 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 597 (805)
++.+||||+|.+.|.+....... ++.++. .+++++|+|+||+.+.||++.+++++..+.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEAR------------------RARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhH------------------HHhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 68999999999888665432210 122333 5678899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcH
Q 003661 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 677 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGl 677 (805)
..++++|+++|++..... ......++.+++.+++.++|.|+| .++.+++..+++. +|++++||..|+||+
T Consensus 248 ~~~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~~ 317 (398)
T cd03800 248 LRERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFGL 317 (398)
T ss_pred hCCCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccCc
Confidence 888999999999876211 112244678888999999999999 7778999999995 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003661 678 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 678 tvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a 757 (805)
+++|||+||+|||+++.||..|+++++.+|++++++|+++++++|.+++ +|++.+++|++++++.+.++|||+.++
T Consensus 318 ~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~ 393 (398)
T cd03800 318 TALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERVA 393 (398)
T ss_pred HHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 9999999999999999999999999999999999999999999997665 899999999999999999999999999
Q ss_pred HHHH
Q 003661 758 QRLL 761 (805)
Q Consensus 758 ~~ll 761 (805)
++++
T Consensus 394 ~~~~ 397 (398)
T cd03800 394 ARLL 397 (398)
T ss_pred HHHh
Confidence 9886
No 12
>PLN02316 synthase/transferase
Probab=100.00 E-value=4.1e-41 Score=405.07 Aligned_cols=408 Identities=14% Similarity=0.091 Sum_probs=284.4
Q ss_pred CcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCcc-ccce-e
Q 003661 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTC-GQRL-E 352 (805)
Q Consensus 275 ~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~-~~~~-e 352 (805)
.+|||++||.+..|- -.+||+..+|. .|+++|+++||+|. |+|+.++....... .... .
T Consensus 586 ~pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~ 646 (1036)
T PLN02316 586 PPMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQR 646 (1036)
T ss_pred CCcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEE
Confidence 359999999998743 35899999999 67777899999999 99998753210000 0000 0
Q ss_pred ee-----------cCccCeEEEEeccCcCCcccccccccccchhh---HHH--HHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003661 353 KV-----------YGTKYSDILRVPFRTEKGVVRKWISRFEVWPY---LET--YTEDVAVEIAKELQGKPDLIIGNYSDG 416 (805)
Q Consensus 353 ~i-----------~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~---l~~--f~~~~~~~i~~~~~~kPDIIh~h~~~~ 416 (805)
.+ ...+++.++.+.... ++ ..+..++.+ ..+ |+..+..+++.....+|||||||+|.+
T Consensus 647 ~~~~~~~~~~v~~~~~~GV~vyfl~~~~--~~----F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 647 SYSWGGTEIKVWFGKVEGLSVYFLEPQN--GM----FWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSS 720 (1036)
T ss_pred EeccCCEEEEEEEEEECCcEEEEEeccc--cc----cCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChH
Confidence 00 011245555543211 11 111111111 122 222233344444457899999999998
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhcccc
Q 003661 417 NIVASLLAHKL------GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT 490 (805)
Q Consensus 417 ~lva~llar~l------gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~ 490 (805)
++++.++++.+ ++|+|+|+|++.... ++ -..++..||.|+|+|+..++.+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 89888887643 589999999864211 00 1246789999999999876633211
Q ss_pred ccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcC-chhhHHhhcchhhhhhhhccccCCC
Q 003661 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSF-HPEIEELLYSDVENKEHLCVLKDRN 569 (805)
Q Consensus 491 ~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~-~~~i~~~l~~~~~~~~~~G~l~~~~ 569 (805)
.++.....|+.+|+||||.+.|.|.++.......- ...++....++...++.+|+. +++
T Consensus 780 -------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 780 -------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred -------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 11221246999999999999998865321000000 000011122334457788984 247
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC--CCcEEEecCCC
Q 003661 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL--NGQFRWISSQM 647 (805)
Q Consensus 570 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L--~~~V~flG~~~ 647 (805)
.|+|+++|||.+.||++.|++|+.++.+ .+++|+|+|+|++. .....+.+++.++++ +++|.|.|.
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f~g~-- 907 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARLCLT-- 907 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEEEec--
Confidence 8999999999999999999999999865 47999999999752 335678889998876 578999883
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------ceEEEECCCC
Q 003661 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG-------------KSGYHIDPYH 714 (805)
Q Consensus 648 ~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg-------------~~G~li~p~d 714 (805)
.+......+++ ++|+||+||++|+||++++|||+||+|+|++++||++|+|.|+ .+||++++.|
T Consensus 908 --~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d 984 (1036)
T PLN02316 908 --YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD 984 (1036)
T ss_pred --CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC
Confidence 32222236777 5999999999999999999999999999999999999999884 6999999999
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 715 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 715 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+++++.+|.+++... ++....+++.+++.+.++|||+..+++|+++|+.
T Consensus 985 ~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 985 AAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred HHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 999999998877321 3445567778888888899999999999999964
No 13
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=8.6e-41 Score=385.47 Aligned_cols=440 Identities=16% Similarity=0.182 Sum_probs=297.3
Q ss_pred CCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCc--ccc--
Q 003661 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT--CGQ-- 349 (805)
Q Consensus 274 ~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~--~~~-- 349 (805)
|| |||+++|.--.| --.|||..-++- .|.++|+++||+|. |+++.+....... ...
T Consensus 4 ~~-~~il~v~~E~~p-------~~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSP-------FVRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchh-------hcccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 999999977664 357999999888 66677799999999 9998765432110 000
Q ss_pred ceeeec--CccCeEEEEe--ccCcCCc---c-cc--cccccccch----------hhHHHH--HHHHHHHHHHHcCCCce
Q 003661 350 RLEKVY--GTKYSDILRV--PFRTEKG---V-VR--KWISRFEVW----------PYLETY--TEDVAVEIAKELQGKPD 407 (805)
Q Consensus 350 ~~e~i~--~~~~v~Ilrv--p~~~~~~---~-l~--~~isr~~i~----------~~l~~f--~~~~~~~i~~~~~~kPD 407 (805)
....+. -.....+.++ ...+..+ + +. .+..|..++ .-.++| ...+..++......+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pD 143 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPD 143 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 011110 0001111111 0000000 0 00 001111111 112222 22223333444456899
Q ss_pred EEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCCcccCCCChhh-----hhhcccccccchhhhHhHHHhhcCCE
Q 003661 408 LIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKYPDSDIY-----WKNLDDKYHFSCQFTADLIAMNHTDF 475 (805)
Q Consensus 408 IIh~h~~~~~lva~llar~l-------gip~v~t~H~l~~~k~~~s~~~-----~~~~~~~y~~~~~~~~e~~a~~~AD~ 475 (805)
|||+|+|.+++++.++++.. ++|.|+|+|++........... +........+...+...+.+++.||.
T Consensus 144 iiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~ 223 (489)
T PRK14098 144 IIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADL 223 (489)
T ss_pred EEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCc
Confidence 99999999999988887654 7999999999754322111100 00000000111123345568899999
Q ss_pred EEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcch
Q 003661 476 IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSD 555 (805)
Q Consensus 476 IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~ 555 (805)
|+|+|+..++.+.... . ..+.++++.+ ....|+.+|+||||.+.|.|..+..-+..--...++....++
T Consensus 224 VitVS~~~a~ei~~~~-~----~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k 292 (489)
T PRK14098 224 LTTTSPRYAEEIAGDG-E----EAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENK 292 (489)
T ss_pred ceeeCHHHHHHhCcCC-C----CCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHH
Confidence 9999998877543310 0 0111221111 115689999999999999987543211000011223333445
Q ss_pred hhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 003661 556 VENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 556 ~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~ 635 (805)
...++.+|++.++++|+|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.++++++++
T Consensus 293 ~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~- 360 (489)
T PRK14098 293 KALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK---------EYEKRFQDFAEEH- 360 (489)
T ss_pred HHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH---------HHHHHHHHHHHHC-
Confidence 566778999777789999999999999999999999999875 4799999999853 3456788888877
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CceEEEEC
Q 003661 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN----GKSGYHID 711 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~d----g~~G~li~ 711 (805)
+++|.|+| .++.+++..+++ ++|+||+||.+|+||++.+|||+||+|+|++++||..|+|.+ +.+|++++
T Consensus 361 -~~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~ 434 (489)
T PRK14098 361 -PEQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFH 434 (489)
T ss_pred -CCCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeC
Confidence 47899999 666778888998 599999999999999999999999999999999999998864 67999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 712 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 712 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
++|+++++++|.+++ .+..|++.|+++++++. .++|||+..+++|+++|+.
T Consensus 435 ~~d~~~la~ai~~~l-~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 435 DYTPEALVAKLGEAL-ALYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred CCCHHHHHHHHHHHH-HHHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 999999999998876 35578999999988764 4789999999999999963
No 14
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.5e-40 Score=375.56 Aligned_cols=395 Identities=13% Similarity=0.121 Sum_probs=285.9
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCC--CCCC-CCccccceee
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL--PDAV-GTTCGQRLEK 353 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~--~~~~-g~~~~~~~e~ 353 (805)
|||+++|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+.. |... ...+......
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999998876 66799999999 77777899999999 999752 2110 0000100001
Q ss_pred ecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcE
Q 003661 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQ 431 (805)
Q Consensus 354 i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~--~lva~llar~lgip~ 431 (805)
....++++++|+|...... ...+. .+.. ...|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLH-LGSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHH-HHHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123578999988642210 00000 1111 122333334444443336899999998654 456777888899999
Q ss_pred EEEecCCCcccCCCChhhhhhcc-cccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeec
Q 003661 432 CTIAHALEKTKYPDSDIYWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH 510 (805)
Q Consensus 432 v~t~H~l~~~k~~~s~~~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~ 510 (805)
++++|+.+.... ....... ..... .....+..+++.||.||++|+...+.+++ .
T Consensus 135 v~~~~d~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~ 189 (412)
T PRK10307 135 WLHIQDYEVDAA----FGLGLLKGGKVAR-LATAFERSLLRRFDNVSTISRSMMNKARE--------------------K 189 (412)
T ss_pred EEEeccCCHHHH----HHhCCccCcHHHH-HHHHHHHHHHhhCCEEEecCHHHHHHHHH--------------------c
Confidence 999997542110 0000000 00000 01124667889999999999987763221 1
Q ss_pred CCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHH
Q 003661 511 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVE 590 (805)
Q Consensus 511 gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~Lie 590 (805)
|++ ..++.+||||+|.+.|.|...... ...++.+|+ ++++++|+|+||+.+.||++.|++
T Consensus 190 ~~~--~~~i~vi~ngvd~~~~~~~~~~~~----------------~~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~ 249 (412)
T PRK10307 190 GVA--AEKVIFFPNWSEVARFQPVADADV----------------DALRAQLGL--PDGKKIVLYSGNIGEKQGLELVID 249 (412)
T ss_pred CCC--cccEEEECCCcCHhhcCCCCccch----------------HHHHHHcCC--CCCCEEEEEcCccccccCHHHHHH
Confidence 333 668999999999988876532110 012345666 667889999999999999999999
Q ss_pred HHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCC
Q 003661 591 WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 670 (805)
Q Consensus 591 A~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS 670 (805)
|++++.+ .++++|+|+|+|+. .++++++++++++. +|+|+| .++.+++..+++. +|++|+||
T Consensus 250 a~~~l~~-~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 250 AARRLRD-RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHHhcc-CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 9998854 57899999999964 46788889999986 799999 6778899999995 99999999
Q ss_pred CCCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003661 671 LYEA----FGLTVVEAMTCGLPTFATCKGG--PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 671 ~~E~----fGltvlEAMA~GlPVVat~~GG--~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
..|+ +|.+++|||+||+|||+|+.|| ..|++. .+|++++++|+++++++|.+++ +|++.+++|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 9998 5777899999999999998876 458886 5999999999999999997665 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHH
Q 003661 745 KRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 745 ~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+++.++|||+.+++++.++|+.
T Consensus 386 ~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 386 EYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999999999863
No 15
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=4e-40 Score=378.97 Aligned_cols=432 Identities=17% Similarity=0.160 Sum_probs=295.2
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCcc--cccee---
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTC--GQRLE--- 352 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~--~~~~e--- 352 (805)
||++||+-.+|- ..+||+..++. .|+++|++.||+|. |+|+.++....... .....
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 689999876632 36899999999 67777799999999 99987654321100 00000
Q ss_pred ------------eecCccCeEEEEeccCcCCcccccccc--cccchhh-HH---HHHHHHHHHHHHHcCCCceEEEEcCC
Q 003661 353 ------------KVYGTKYSDILRVPFRTEKGVVRKWIS--RFEVWPY-LE---TYTEDVAVEIAKELQGKPDLIIGNYS 414 (805)
Q Consensus 353 ------------~i~~~~~v~Ilrvp~~~~~~~l~~~is--r~~i~~~-l~---~f~~~~~~~i~~~~~~kPDIIh~h~~ 414 (805)
.....+++.+++++.....+ +.++. ....|.. .. .|...+.. ++.....+|||||+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~l~~~~~~pDviH~hd~ 138 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAALE-LLRRLGWKPDIIHCHDW 138 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHHH-HHHhcCCCCcEEEECch
Confidence 00112456676664322110 00000 0011111 11 23333333 33344579999999999
Q ss_pred CchHHHHHHHHHc------CCcEEEEecCCCcccCCCChhhhh--------hcccccccchhhhHhHHHhhcCCEEEecC
Q 003661 415 DGNIVASLLAHKL------GVTQCTIAHALEKTKYPDSDIYWK--------NLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 415 ~~~lva~llar~l------gip~v~t~H~l~~~k~~~s~~~~~--------~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 480 (805)
.+++++.+++... ++|+|+|+|++............. .....+.+...+..++.++..||.|+++|
T Consensus 139 ~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS 218 (476)
T cd03791 139 HTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVS 218 (476)
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecC
Confidence 9988888887764 899999999975433211110000 00111122334456778899999999999
Q ss_pred HHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003661 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 481 ~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 560 (805)
+...+.+.+..+.+ .+.+ .+.....|+.+|+||+|.+.|.|..+......-.....+....++...++
T Consensus 219 ~~~~~~i~~~~~~~------gl~~------~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 219 PTYAREILTPEFGE------GLDG------LLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HhHHHHhCCCCCCc------chHH------HHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 88776443221000 0000 00111469999999999999988654321110001112233344556678
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE
Q 003661 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 561 ~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V 640 (805)
++|++.++++++|+++||+.+.||++.+++++.++.+. +++|+++|+|.. ...+.+.++++++ .++|
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~---------~~~~~~~~~~~~~--~~~v 353 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP---------EYEEALRELAARY--PGRV 353 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH---------HHHHHHHHHHHhC--CCcE
Confidence 88886568899999999999999999999999998764 499999999853 3345667777765 5678
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc------eEEEECCCC
Q 003661 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK------SGYHIDPYH 714 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~------~G~li~p~d 714 (805)
.+.+ ..+.+++..+++ ++|++++||.+|+||++++|||+||+|||+|+.||..|+|.++. +|++++|.|
T Consensus 354 ~~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~ 428 (476)
T cd03791 354 AVLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN 428 (476)
T ss_pred EEEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC
Confidence 8776 344556667777 59999999999999999999999999999999999999999988 999999999
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 715 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 715 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
+++++++|.++++ ...+++.|.+|++++++ +.|||+.++++|+++|+
T Consensus 429 ~~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 429 ADALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 9999999988763 44678999999988865 47999999999999985
No 16
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=4.7e-40 Score=370.23 Aligned_cols=365 Identities=18% Similarity=0.219 Sum_probs=272.0
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++..+ |..||.+.++. +|++.|+++||+|. |+|+..++..+. . ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~----~----~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI----R----YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc----c----ccc
Confidence 6899988776 56799999999 77777899999999 999764322111 0 112
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEe
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGN--IVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~--lva~llar~lgip~v~t~ 435 (805)
.++.++++|...... ...+. ....+... ++.++. +.+|||||+|.+.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~-~~~~~~~~-l~~~~~--~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLP-TFFGTFPL-LRNILI--RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Ccccc-chhhhHHH-HHHHHH--hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 367888887643210 00111 11111111 222222 347999999987653 346677888999999999
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCC
Q 003661 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~ 515 (805)
|+..... +... .. . . ......++++|.+|++|....+.. ....+++
T Consensus 121 h~~~~~~----~~~~-~~---~---~--~~~~~~~~~~d~ii~~s~~~~~~~-------------------~~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASS-IH---T---N--KLLRFSLADVDHVICVSHTSKENT-------------------VLRASLD-- 166 (398)
T ss_pred ccccccc----chhh-HH---h---h--HHHHHhhccCCEEEEecHhHhhHH-------------------HHHhCCC--
Confidence 9853210 0000 00 0 0 112346789999999998765411 0112333
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003661 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 595 (805)
..++.+||||+|.+.|.|.... .++++++|+++||+.+.||++.|++|++.+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999877664321 045778999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003661 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~f 675 (805)
.+..++++|+|+|+|+. .+.+.++++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 219 ~~~~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~~ 282 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEAF 282 (398)
T ss_pred HhhCCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhcc
Confidence 88889999999999854 367888999999999999999 7778999999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003661 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 755 (805)
|++++||||||+|||+|+.||..|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+.
T Consensus 283 g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~~ 356 (398)
T cd03796 283 CIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWED 356 (398)
T ss_pred CHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHHH
Confidence 999999999999999999999999998764 44454 48999999998766 5666666788999999999999999
Q ss_pred HHHHHHHHHHH
Q 003661 756 YSQRLLTLTGV 766 (805)
Q Consensus 756 ~a~~ll~Ly~~ 766 (805)
++++++++|+.
T Consensus 357 ~~~~~~~~y~~ 367 (398)
T cd03796 357 VAKRTEKVYDR 367 (398)
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 17
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.2e-39 Score=375.55 Aligned_cols=435 Identities=17% Similarity=0.186 Sum_probs=286.0
Q ss_pred cceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCcccc--ceee
Q 003661 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQ--RLEK 353 (805)
Q Consensus 276 ~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~--~~e~ 353 (805)
.|||+++|.--.| --.|||..-++- .|.++|+++||+|. |+++.+...... +.. ....
T Consensus 3 ~~~il~v~~E~~p-------~~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFP-------LIKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEecccc-------ccCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 4899999976653 367999999888 66777899999999 999876543210 100 1111
Q ss_pred ec---C---------ccCeEEEEeccC---cCCc-ccccccccccchhhHHHH--HHHHHHHHHHHc--CCCceEEEEcC
Q 003661 354 VY---G---------TKYSDILRVPFR---TEKG-VVRKWISRFEVWPYLETY--TEDVAVEIAKEL--QGKPDLIIGNY 413 (805)
Q Consensus 354 i~---~---------~~~v~Ilrvp~~---~~~~-~l~~~isr~~i~~~l~~f--~~~~~~~i~~~~--~~kPDIIh~h~ 413 (805)
+. + .+++.++-+... ...+ ++.. -...+-..-.++| +..+.-++.... +.+|||||+|.
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~~y~~-~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hd 141 (485)
T PRK14099 63 FPDLFGGPARLLAARAGGLDLFVLDAPHLYDRPGNPYVG-PDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHD 141 (485)
T ss_pred EeeeCCceEEEEEEEeCCceEEEEeChHhhCCCCCCCCC-ccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECC
Confidence 11 1 012222222100 0001 1000 0000001112222 223333444332 46899999999
Q ss_pred CCchHHHHHHHH--HcCCcEEEEecCCCccc-CCCCh-----hhhhhcc-cccccchhhhHhHHHhhcCCEEEecCHHHH
Q 003661 414 SDGNIVASLLAH--KLGVTQCTIAHALEKTK-YPDSD-----IYWKNLD-DKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 414 ~~~~lva~llar--~lgip~v~t~H~l~~~k-~~~s~-----~~~~~~~-~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
|.+++++.++.. ..++|.|+|+|++.... ++... ..+..+. ....+.......+.++..||.|+|+|+..+
T Consensus 142 w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a 221 (485)
T PRK14099 142 WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYA 221 (485)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHH
Confidence 999888876653 24689999999975432 11100 0010000 000011111224567899999999999877
Q ss_pred hhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhcc
Q 003661 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCV 564 (805)
Q Consensus 485 ~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~ 564 (805)
+.+.+.... +.+.+.+ .....|+.+|+||||.+.|.|.++..-....-...++....++...++++|+
T Consensus 222 ~ei~~~~~g------~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl 289 (485)
T PRK14099 222 LEIQGPEAG------MGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGL 289 (485)
T ss_pred HHHhcccCC------cChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCC
Confidence 644322100 0000000 1115689999999999999886543211000001122223334556778898
Q ss_pred ccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE-EEe
Q 003661 565 LKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF-RWI 643 (805)
Q Consensus 565 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V-~fl 643 (805)
..+++.++|+++||+.+.||++.|++|+.++.+ .+++|+|+|+|+. ...+.+++++++++ +++ .|+
T Consensus 290 ~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~---------~~~~~l~~l~~~~~--~~v~~~~ 356 (485)
T PRK14099 290 DPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA---------ELEARFRAAAQAYP--GQIGVVI 356 (485)
T ss_pred CcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH---------HHHHHHHHHHHHCC--CCEEEEe
Confidence 555678999999999999999999999998875 4699999999853 23466777787764 455 788
Q ss_pred cCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEECCCC
Q 003661 644 SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNG---------KSGYHIDPYH 714 (805)
Q Consensus 644 G~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg---------~~G~li~p~d 714 (805)
|+ .+++..++..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|
T Consensus 357 G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d 430 (485)
T PRK14099 357 GY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT 430 (485)
T ss_pred CC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC
Confidence 83 46788887535999999999999999999999999999999999999999876 6899999999
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 715 GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 715 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+++++++|.+++ .+..|++.|++|+++++ .++|||+.++++|+++|+.
T Consensus 431 ~~~La~ai~~a~-~l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 431 ADALAAALRKTA-ALFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred HHHHHHHHHHHH-HHhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHH
Confidence 999999998754 24589999999999986 3789999999999999874
No 18
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=2.1e-38 Score=353.40 Aligned_cols=378 Identities=21% Similarity=0.323 Sum_probs=274.1
Q ss_pred ceEEEEcccccccccCcCCCCC-cccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeec
Q 003661 277 FNVVILTPHGYFAQDDVLGYPD-TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pd-tGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~ 355 (805)
|||++|+..++ |+ .||.+.++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987665 44 499999999 666666776 7777 66643211 1
Q ss_pred CccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003661 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 356 ~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~ 435 (805)
...++.+.+++..... ......+..+..++. ......+||+||+|.+..++.+.++++..++|+|++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235667666542210 011111222221211 1111247999999998877777777778899999999
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCC
Q 003661 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~ 515 (805)
|++........ ......+.+.. ..+..+++.+|.||++|+...+.+.+.. .+++
T Consensus 114 h~~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~~------------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKE----EQLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKYY------------------PDLD-- 167 (388)
T ss_pred ecccccccccc----cccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHHc------------------CCCC--
Confidence 98743221000 00111122211 2356788999999999987766332211 1232
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003661 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 595 (805)
..++.+||||+|...|.|..... .+..+|+ ++++++|+|+||+.+.||++.|+++++++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNV-------------------VLDRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHH-------------------HHHHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 56899999999998887653322 1244666 67788999999999999999999999987
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC-CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCC
Q 003661 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL-NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 674 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L-~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~ 674 (805)
. ++++++++|++++. ....+++++.+..++. .++|.|++ +.++.+++..+++. +|++|+||.+|+
T Consensus 227 ~---~~~~l~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e~ 292 (388)
T TIGR02149 227 P---KDVQVVLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYEP 292 (388)
T ss_pred h---hcCcEEEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccCC
Confidence 5 47899999988652 1234566677777765 34588765 16778999999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH------HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003661 675 FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG------EQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 748 (805)
Q Consensus 675 fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~------e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 748 (805)
||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +||+.+++|++++++.+.
T Consensus 293 ~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~ 368 (388)
T TIGR02149 293 LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRAE 368 (388)
T ss_pred CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888 88888886655 899999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHH
Q 003661 749 EKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 749 ~~ysw~~~a~~ll~Ly~~ 766 (805)
++|||+.+++++.++|+.
T Consensus 369 ~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 369 EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HhCCHHHHHHHHHHHHHh
Confidence 999999999999999863
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3e-38 Score=348.95 Aligned_cols=366 Identities=20% Similarity=0.286 Sum_probs=266.5
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||++++. |..||.+.++. +|++.|+++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 68999973 34599999999 67777899999999 98875332100 01
Q ss_pred ccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH----cCCcEE
Q 003661 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK----LGVTQC 432 (805)
Q Consensus 357 ~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~----lgip~v 432 (805)
..++.+..++.... + ......+.......+.+.+. +.+||+||+|++.....+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-P-------LFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-c-------hhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 12233333332111 0 00111111112222222222 348999999987654444444432 279999
Q ss_pred EEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCC
Q 003661 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (805)
Q Consensus 433 ~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi 512 (805)
++.|+....... ....+. ...+.+++.+|.|++.|....+.+.+. |
T Consensus 116 ~~~h~~~~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~---~------------------ 161 (371)
T cd04962 116 TTLHGTDITLVG--------QDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL---F------------------ 161 (371)
T ss_pred EEEcCCcccccc--------ccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh---c------------------
Confidence 999975321110 011111 123467889999999998776532211 0
Q ss_pred CCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHH
Q 003661 513 DVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWY 592 (805)
Q Consensus 513 ~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~ 592 (805)
....++.+||||+|...|.+...... +..++. ++++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEAL-------------------KRRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHH-------------------HHhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 11568999999999887765443221 233455 56788999999999999999999999
Q ss_pred HHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC
Q 003661 593 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 672 (805)
Q Consensus 593 ~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~ 672 (805)
..+.+. .+++|+++|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||..
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~~ 280 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE-----------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSEK 280 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC-----------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCCc
Confidence 998765 5689999999965 35677888899999999999943 357888885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCC
Q 003661 673 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYT 752 (805)
Q Consensus 673 E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ys 752 (805)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +||+.+.+|++++++.+.++||
T Consensus 281 E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs 356 (371)
T cd04962 281 ESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERFD 356 (371)
T ss_pred CCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999997665 8999999999999999889999
Q ss_pred HHHHHHHHHHHHHH
Q 003661 753 WKIYSQRLLTLTGV 766 (805)
Q Consensus 753 w~~~a~~ll~Ly~~ 766 (805)
|+.+++++.++|+.
T Consensus 357 ~~~~~~~~~~~y~~ 370 (371)
T cd04962 357 SERIVPQYEALYRR 370 (371)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999863
No 20
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=2.1e-38 Score=358.32 Aligned_cols=281 Identities=18% Similarity=0.269 Sum_probs=231.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--HcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecC
Q 003661 403 QGKPDLIIGNYSDGNIVASLLAH--KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 403 ~~kPDIIh~h~~~~~lva~llar--~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 480 (805)
+.+||+||+|++..+..+..+++ .++.|.++|+|+..... ......+. ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISS--------REVLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccccccc--------chhhhhhh-----HHHHHHHHhCCEEEECC
Confidence 35799999999877777777765 34557789999853221 00001111 01234678999999999
Q ss_pred HHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003661 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 481 ~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 560 (805)
+...+.+.+ .|++ ..|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l~~--------------------~g~~--~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRLQK--------------------MGCP--PEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHHHH--------------------cCCC--HHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 876653221 1333 56899999999998886532110
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE
Q 003661 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 561 ~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V 640 (805)
+.++..|+++||+.+.||++.+++|++.+++.+++++|+|+|+|+. .++++++++++++.++|
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~-----------~~~l~~~~~~~~l~~~V 281 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW-----------ERRLRTLIEQYQLEDVV 281 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 2345679999999999999999999999988888999999999954 46788999999999999
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCC
Q 003661 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYH 714 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~~------E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d 714 (805)
.|+| .++.+++..+++. +|+||+||.. ||||++++||||||+|||+|+.||..|+|.++.+|++++|+|
T Consensus 282 ~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d 356 (406)
T PRK15427 282 EMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEND 356 (406)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCC
Confidence 9999 6778999999995 9999999974 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 715 GEQAAEILVDFFEKCKA-DPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 715 ~e~lA~aI~~~l~~l~~-dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+++++++|.+++ + ||+.+++|+++|++++.++|+|+..++++.++|+.
T Consensus 357 ~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 357 AQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999997765 7 99999999999999999999999999999999864
No 21
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=1.7e-38 Score=365.14 Aligned_cols=374 Identities=17% Similarity=0.217 Sum_probs=264.3
Q ss_pred CCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceee
Q 003661 274 PMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEK 353 (805)
Q Consensus 274 ~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~ 353 (805)
.++|||++++ +..| -+..||.+.++. +|+++|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 4568999996 3221 146799999999 67777899999999 998653211 00
Q ss_pred ecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEE
Q 003661 354 VYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQC 432 (805)
Q Consensus 354 i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~-~lva~llar~lgip~v 432 (805)
..++.+++++..+. +... .. .+.+ .+...+.+.+ + +.+|||||+|.+.. .+.+.++++..++|+|
T Consensus 107 ---~~g~~v~~~~~~~~-~~~~----~~-~~~~--~~~~~l~~~i-~--~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 ---FHGAKVIGSWSFPC-PFYQ----KV-PLSL--ALSPRIISEV-A--RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred ---ccCceeeccCCcCC-ccCC----Cc-eeec--cCCHHHHHHH-H--hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 12344443322111 0000 00 0000 0111122222 2 24799999998654 3455667888999999
Q ss_pred EEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCC
Q 003661 433 TIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGI 512 (805)
Q Consensus 433 ~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi 512 (805)
++.|+......+.. .+..+.. . .....+..++.+|.|+++|....+.+.+. ...
T Consensus 173 ~~~h~~~~~~~~~~--~~~~~~~---~--~~~~~r~~~~~ad~ii~~S~~~~~~l~~~-------------------~~~ 226 (465)
T PLN02871 173 MSYHTHVPVYIPRY--TFSWLVK---P--MWDIIRFLHRAADLTLVTSPALGKELEAA-------------------GVT 226 (465)
T ss_pred EEEecCchhhhhcc--cchhhHH---H--HHHHHHHHHhhCCEEEECCHHHHHHHHHc-------------------CCC
Confidence 99997532211111 0110000 0 01123557789999999998876632211 011
Q ss_pred CCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHH
Q 003661 513 DVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWY 592 (805)
Q Consensus 513 ~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~ 592 (805)
+ ..++.+||||+|.+.|.|....... +..+.. ..+++++|+|+||+.+.||++.+++++
T Consensus 227 ~--~~kv~vi~nGvd~~~f~p~~~~~~~------------------~~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 227 A--ANRIRVWNKGVDSESFHPRFRSEEM------------------RARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred C--cCeEEEeCCccCccccCCccccHHH------------------HHHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 1 4689999999999988775432211 111211 135678999999999999999999998
Q ss_pred HHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC
Q 003661 593 GKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 672 (805)
Q Consensus 593 ~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~ 672 (805)
+++ ++++|+|+|+|+. .++++++++. .+|.|+| .++.+++..+|+. +|+||+||..
T Consensus 286 ~~~----~~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~ 341 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY-----------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSES 341 (465)
T ss_pred HhC----CCcEEEEEeCChH-----------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCcc
Confidence 876 5799999999854 3455555553 4799999 6777899999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccccccc---CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q 003661 673 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVN---GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 749 (805)
Q Consensus 673 E~fGltvlEAMA~GlPVVat~~GG~~EiI~d---g~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~ 749 (805)
|+||++++||||||+|||+|+.||..|++.+ +.+|++++|+|+++++++|.+++ +|++.+++|++++++.+ +
T Consensus 342 E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~-~ 416 (465)
T PLN02871 342 ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV-E 416 (465)
T ss_pred cccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999999999 99999999999999999997766 89999999999999998 6
Q ss_pred hCCHHHHHHHHHH-HHHH
Q 003661 750 KYTWKIYSQRLLT-LTGV 766 (805)
Q Consensus 750 ~ysw~~~a~~ll~-Ly~~ 766 (805)
+|||+.+++++++ +|+.
T Consensus 417 ~fsw~~~a~~l~~~~Y~~ 434 (465)
T PLN02871 417 KWDWRAATRKLRNEQYSA 434 (465)
T ss_pred hCCHHHHHHHHHHHHHHH
Confidence 8999999999998 6764
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=5.7e-38 Score=351.76 Aligned_cols=375 Identities=18% Similarity=0.230 Sum_probs=275.9
Q ss_pred CcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeee
Q 003661 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (805)
Q Consensus 275 ~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i 354 (805)
|+-||++++.--+|-|. ...||+++++. +++++|+. +|+ |+|...+.-. ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 67799999988876543 34699999999 66667743 888 9998765311 111
Q ss_pred cCccCeEEEEeccCcCCc-ccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003661 355 YGTKYSDILRVPFRTEKG-VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (805)
Q Consensus 355 ~~~~~v~Ilrvp~~~~~~-~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~ 433 (805)
...+|+.++++++....+ ...+|.+. ..++| .......+......++||||+|... .+...+..+..++|.+.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPLPY----SQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-CchhH----HHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 112356777776643211 11222222 22333 2333333333223579999999754 34555555566789999
Q ss_pred EecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCC
Q 003661 434 IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGID 513 (805)
Q Consensus 434 t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~ 513 (805)
+.|.... + ..+..++.||++|....+.... +.+
T Consensus 127 ~~h~~~~--------------~------------~~~~~~~~ii~~S~~~~~~~~~---------------------~~~ 159 (380)
T PRK15484 127 HMHNAFE--------------P------------ELLDKNAKIIVPSQFLKKFYEE---------------------RLP 159 (380)
T ss_pred EEecccC--------------h------------hHhccCCEEEEcCHHHHHHHHh---------------------hCC
Confidence 9996311 0 1234679999999876652211 112
Q ss_pred CCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHH
Q 003661 514 VFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYG 593 (805)
Q Consensus 514 ~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~ 593 (805)
..++.+||||+|.+.|.+..... .++.+|+ ++++++|+|+||+.+.||++.|++|+.
T Consensus 160 --~~~i~vIpngvd~~~~~~~~~~~-------------------~~~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 160 --NADISIVPNGFCLETYQSNPQPN-------------------LRQQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred --CCCEEEecCCCCHHHcCCcchHH-------------------HHHHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 45789999999998887643321 1234565 567789999999999999999999999
Q ss_pred HhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC-
Q 003661 594 KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY- 672 (805)
Q Consensus 594 ~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~- 672 (805)
++.+.+|+++|+|+|+++... +.+...+.+++++++++++ .+|.|+| .++.+++..+++. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~~--~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~~ 287 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTASS--KGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQVE 287 (380)
T ss_pred HHHHhCCCeEEEEEeCCcccc--ccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCCc
Confidence 998888999999999986521 1122345566777777765 5899999 6777899999995 9999999974
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEE-EECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhC
Q 003661 673 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGY-HIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKY 751 (805)
Q Consensus 673 E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~-li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~y 751 (805)
|+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.+++ +|++. .+|+++|++.+.++|
T Consensus 288 E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~f 362 (380)
T PRK15484 288 EAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSKY 362 (380)
T ss_pred cccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999 568899999999997665 89985 789999999999999
Q ss_pred CHHHHHHHHHHHHHHh
Q 003661 752 TWKIYSQRLLTLTGVY 767 (805)
Q Consensus 752 sw~~~a~~ll~Ly~~~ 767 (805)
||+.++++++++|+.|
T Consensus 363 sw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 363 SWEGVTQRFEEQIHNW 378 (380)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=3.3e-37 Score=346.74 Aligned_cols=366 Identities=15% Similarity=0.183 Sum_probs=248.6
Q ss_pred HHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccccccccchhhHHHHHH---
Q 003661 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTE--- 392 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~--- 392 (805)
+|+++|+++||+|+ ++|....... .+ ++++++++..+... ...++|...+..
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888899999999 9987643211 11 57888887543211 123333332221
Q ss_pred ---HHHHHHHH--HcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccc---cccchhh
Q 003661 393 ---DVAVEIAK--ELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDK---YHFSCQF 463 (805)
Q Consensus 393 ---~~~~~i~~--~~~~kPDIIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~---y~~~~~~ 463 (805)
.+.+.+.. ..+.+||+||+|...+ .+..+.+. .++|+|..+|.+........+......... .+.....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRN 147 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhh
Confidence 11222222 2245899999997554 22234444 468988766532211100000000000000 0101111
Q ss_pred hHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhc
Q 003661 464 TADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKS 543 (805)
Q Consensus 464 ~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~ 543 (805)
......++.+|.||++|....+.+.+ .+..|+.|||||+|.+.|.|.........
T Consensus 148 ~~~~~~~~~ad~vi~~s~~~~~~~~~------------------------~~~~ki~vI~ngvd~~~f~~~~~~~~~~~- 202 (396)
T cd03818 148 ALILLALAQADAGVSPTRWQRSTFPA------------------------ELRSRISVIHDGIDTDRLRPDPQARLRLP- 202 (396)
T ss_pred hHhHHHHHhCCEEECCCHHHHhhCcH------------------------hhccceEEeCCCccccccCCCchhhhccc-
Confidence 11345789999999999877663211 11468999999999999887654322110
Q ss_pred CchhhHHhhcchhhhhhhhccccCCCCcEEEEEee-ccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHH-
Q 003661 544 FHPEIEELLYSDVENKEHLCVLKDRNKPILFTMAR-LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQ- 621 (805)
Q Consensus 544 ~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~- 621 (805)
...++ .+++++|+|+|| +.+.||++.|++|++++.+..++++|+|+|++....+...+..
T Consensus 203 ----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~ 264 (396)
T cd03818 203 ----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGE 264 (396)
T ss_pred ----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcc
Confidence 11122 457789999998 9999999999999999988889999999998532111000000
Q ss_pred HHHHHH-HHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccc
Q 003661 622 AEMKKM-YSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEI 700 (805)
Q Consensus 622 ~e~~~l-~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~Ei 700 (805)
.+.+++ .++...++ .++|.|+| .++.+++..+++. +|++|+||..|++|++++||||||+|||+|+.||..|+
T Consensus 265 ~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~ 338 (396)
T cd03818 265 SWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREV 338 (396)
T ss_pred cHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhh
Confidence 012222 22222222 47899999 7788999999995 99999999999999999999999999999999999999
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003661 701 IVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 701 I~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll 761 (805)
|.++.+|++++++|+++++++|.+++ +||+.+.+|+++|++++.++|||+.++++|+
T Consensus 339 i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 339 ITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred cccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999999997666 8999999999999999988999999999986
No 24
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=7e-37 Score=341.51 Aligned_cols=386 Identities=20% Similarity=0.278 Sum_probs=262.8
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||++++|... .||.+.++. +|+++|+++||+|+ |+|...+.. .+ .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~---~~~~~~ 51 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HC---FEETKD 51 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hc---chhccC
Confidence 79999976642 489999999 67777899999999 998643211 00 011111
Q ss_pred ccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003661 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIA--KELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTI 434 (805)
Q Consensus 357 ~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~--~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t 434 (805)
.++.+...+.....+. .++ ...+..+.......+. .....+||+||+|....+..+ +....+.|++++
T Consensus 52 -~~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 52 -GTLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred -CeeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 1122322211100000 000 0111112222111111 122468999999875543322 223334899999
Q ss_pred ecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCC
Q 003661 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (805)
Q Consensus 435 ~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~ 514 (805)
.|........... .++. .++.. ....+..+++.+|.|+++|....+.+.+..+ .+.
T Consensus 122 ~h~~~~~~~~~~~-~~~~---~~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~~------------------~~~- 177 (392)
T cd03805 122 CHFPDQLLAQRGS-LLKR---LYRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTFP------------------SLA- 177 (392)
T ss_pred EecChHHhcCCCc-HHHH---HHHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHhc------------------ccc-
Confidence 9942211000000 0110 11110 1124667899999999999876553222110 111
Q ss_pred CCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHH
Q 003661 515 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 594 (805)
Q Consensus 515 ~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 594 (805)
..++.+|+||+|.+.|.|......+ +..+. .+++++|+++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2334699999999888664332110 11122 4677899999999999999999999999
Q ss_pred hHccC---CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHH-cCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCC
Q 003661 595 NAKLR---ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA 670 (805)
Q Consensus 595 l~~~~---~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~-l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS 670 (805)
+.+.. ++++|+++|+++... .++..+.+++++++++ +++.++|.|+| .++.+++..+++. +|++++||
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~~---~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~s 307 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPRV---AENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYTP 307 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCCC---chhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEECC
Confidence 98776 799999999986521 1233456788899999 99999999999 6777899999995 99999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Q 003661 671 LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 750 (805)
Q Consensus 671 ~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ 750 (805)
..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++.+++|+++|++++.++
T Consensus 308 ~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~~ 382 (392)
T cd03805 308 SNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKEK 382 (392)
T ss_pred CcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999976 8999999997665 89999999999999999999
Q ss_pred CCHHHHHHHH
Q 003661 751 YTWKIYSQRL 760 (805)
Q Consensus 751 ysw~~~a~~l 760 (805)
|||+.+++++
T Consensus 383 ~s~~~~~~~~ 392 (392)
T cd03805 383 FSTEAFAERL 392 (392)
T ss_pred cCHHHHhhhC
Confidence 9999998764
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.8e-36 Score=336.90 Aligned_cols=365 Identities=17% Similarity=0.194 Sum_probs=261.8
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+.|.++. +.||.+.++. +|++.|.+.|+++. |++....+. ..... ..
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~~----~~~~~----~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVSA----FRKRI----QR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCCh----hHHHH----Hh
Confidence 677776554 3599999999 66667788999988 776322111 11111 11
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 436 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~-v~t~H 436 (805)
.++.+++++.... ..+. +...+.+.+.+ .+|||||+|...+ ..+.++++..++|. +++.|
T Consensus 52 ~~i~~~~~~~~~~-----------~~~~----~~~~l~~~l~~---~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG-----------KDVA----VYPQLYRLLRQ---LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC-----------CChH----HHHHHHHHHHH---hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2567777654321 0111 11222333333 3799999997543 34455666778775 44455
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~ 516 (805)
+....... ...| .+. ...+...+.+|.+|++|....+.+.+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~-----~~~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYR-----WLRRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHH-----HHHHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43211100 0011 011 112334567899999998776632221 1232 5
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.++.+|+||+|.+.|.|........ .+.... +.++++|+++||+.+.||++.+++++..+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPI-----------------LPPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhh-----------------hHhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 6899999999998887654221110 001111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC
Q 003661 597 KLRE----LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY 672 (805)
Q Consensus 597 ~~~~----~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~ 672 (805)
+..+ +++|+++|+|+. .+++++.++++++.++|.|+|.+ .++..+++. +|++|+||..
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~~ 282 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSLA 282 (374)
T ss_pred HhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEecccc
Confidence 6554 689999999864 35778889999999999999942 467888885 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCC
Q 003661 673 EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYT 752 (805)
Q Consensus 673 E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ys 752 (805)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +|++.+.+++++|++++.++||
T Consensus 283 Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~fs 358 (374)
T TIGR03088 283 EGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQFS 358 (374)
T ss_pred ccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999997665 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 003661 753 WKIYSQRLLTLTGV 766 (805)
Q Consensus 753 w~~~a~~ll~Ly~~ 766 (805)
|+.+++++.++|+.
T Consensus 359 ~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 359 INAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
No 26
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=2.2e-36 Score=333.52 Aligned_cols=280 Identities=21% Similarity=0.311 Sum_probs=230.1
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003661 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.+||+||+|....+..+..++++.|+|++++.|+........ +..... +.. ....+...++.+|.|+++|+..
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~----~~~~~~-~~~--~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLA----LLLRSR-WAL--YARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccch----hhcccc-hhH--HHHHHHHHHHhcCEEEECCHHH
Confidence 479999999877777888888999999999999754322111 000000 111 1123445778999999999877
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhc
Q 003661 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 563 (805)
Q Consensus 484 ~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G 563 (805)
.+.+.+ .|++ +.++.++|||+|.+.|.|...
T Consensus 154 ~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 663221 1333 668999999999877755321
Q ss_pred cccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003661 564 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWI 643 (805)
Q Consensus 564 ~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~fl 643 (805)
..+++.++++|++.+.||++.+++|+..+.+..++++|+++|+|+. .++++++++++++.++|+|+
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL-----------LAALEALARALGLGGRVTFL 250 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH-----------HHHHHHHHHHcCCCCeEEEC
Confidence 3456789999999999999999999999988888999999998843 45788889999999999999
Q ss_pred cCCCCcCChHHHHHHHHccCcEEEeCCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003661 644 SSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 644 G~~~~~v~~~el~~~la~aaDvfV~PS~------~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~ 717 (805)
| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|+++
T Consensus 251 g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~ 325 (367)
T cd05844 251 G----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVAA 325 (367)
T ss_pred C----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHHH
Confidence 9 7778999999995 999999997 5999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003661 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 762 (805)
++++|.+++ +|++.+++|+.++++.+.++|||+.+++++.+
T Consensus 326 l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 326 LAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 999997766 89999999999999999999999999999875
No 27
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=4.1e-36 Score=355.28 Aligned_cols=460 Identities=13% Similarity=0.142 Sum_probs=294.8
Q ss_pred CHHHHHHHHHHHHHHhhcCCCCCCchHH-------HHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCCCcccHhHHhcc
Q 003661 200 NLNSLQHVLRKAEEYLTTVVPETPFSEL-------ALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPCTLETFLGR 272 (805)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p~~~~~~~f~~~ 272 (805)
..++=..++++|.+..+.=. .-|.+. ...+|.+|=|.-=-++.-|+.-+-+++..+-+.-.. ..+ ..
T Consensus 203 ~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~ 276 (694)
T PRK15179 203 ALWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRRRNA-EYD---AG 276 (694)
T ss_pred CHHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhcCcc-ccc---CC
Confidence 34455556666665554422 122222 234677887766667777888888888776543211 000 01
Q ss_pred CCCcc-eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCC------------ceeeceeEEecCC
Q 003661 273 IPMVF-NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGL------------DITPQILIITRLL 339 (805)
Q Consensus 273 ~~~~~-rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh------------~V~~~I~VvT~~~ 339 (805)
+-.+. ||+++.+.. ..||.+.++. .|+.+|.+.|. ++. |++++...
T Consensus 277 ~~~~~~rIl~vi~sl-----------~~GGAEr~~~--------~La~~l~~~~~~~~~~~g~g~~~~~~--V~~~~~~~ 335 (694)
T PRK15179 277 PESFVGPVLMINGSL-----------GAGGAERQFV--------NTAVALQSAIQQGQSIAGYGVLGPVQ--VVCRSLRS 335 (694)
T ss_pred CCCCcceEEEEeCCC-----------CCCcHHHHHH--------HHHHHHHhcccCcccccCccCCCCcE--EEEEeccc
Confidence 11234 888886443 3599999999 55555677644 223 22443211
Q ss_pred CCCCCC-ccccceeeecCccCeEEEEeccCcCCccccc--cc---cc--ccchhhHHHHHHHHHHHHHHHcCCCceEEEE
Q 003661 340 PDAVGT-TCGQRLEKVYGTKYSDILRVPFRTEKGVVRK--WI---SR--FEVWPYLETYTEDVAVEIAKELQGKPDLIIG 411 (805)
Q Consensus 340 ~~~~g~-~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~--~i---sr--~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~ 411 (805)
..|. .+...++ ..++.+..++..+..+.... +. .+ ..+..........+. .+++. .+|||||+
T Consensus 336 --~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~-~~lk~--~kpDIVH~ 406 (694)
T PRK15179 336 --REGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLT-DVMRS--SVPSVVHI 406 (694)
T ss_pred --ccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHH-HHHHH--cCCcEEEE
Confidence 1111 1111111 13566666654432111000 00 00 000000111112222 23332 47999999
Q ss_pred cCCCchHHHHHHHHHcCCcEEE-EecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhcccc
Q 003661 412 NYSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDT 490 (805)
Q Consensus 412 h~~~~~lva~llar~lgip~v~-t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~ 490 (805)
|.+.+++++.++++..++|+|+ +.|++...... . .|+. .|. .....+....++.+|++|....+.+.+
T Consensus 407 h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~~---~~~----~l~~~l~~~~~~i~Vs~S~~~~~~l~~- 475 (694)
T PRK15179 407 WQDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYRV---EYD----IIYSELLKMRGVALSSNSQFAAHRYAD- 475 (694)
T ss_pred eCCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHHH---HHH----HHHHHHHhcCCeEEEeCcHHHHHHHHH-
Confidence 9998888888899889999876 56765322111 0 1100 011 000112222445667777654432111
Q ss_pred ccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCC
Q 003661 491 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNK 570 (805)
Q Consensus 491 ~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k 570 (805)
..|++ ..|+.|||||||...|.+........ ..+....+.+.
T Consensus 476 ------------------~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~------------------~~~~~~~~~~~ 517 (694)
T PRK15179 476 ------------------WLGVD--ERRIPVVYNGLAPLKSVQDDACTAMM------------------AQFDARTSDAR 517 (694)
T ss_pred ------------------HcCCC--hhHEEEECCCcCHHhcCCCchhhHHH------------------HhhccccCCCC
Confidence 11333 66999999999988876533221110 01111113457
Q ss_pred cEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcC
Q 003661 571 PILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRV 650 (805)
Q Consensus 571 ~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v 650 (805)
++|+++||+.+.||++.|++|++++.+.+|+++|+|+|+|+. .++++++++++++.++|.|+|++.
T Consensus 518 ~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~-----------~~~L~~l~~~lgL~~~V~flG~~~--- 583 (694)
T PRK15179 518 FTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL-----------LESVREFAQRLGMGERILFTGLSR--- 583 (694)
T ss_pred eEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc-----------hHHHHHHHHHcCCCCcEEEcCCcc---
Confidence 799999999999999999999999988889999999999964 467889999999999999999533
Q ss_pred ChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH--HHHHHHHHHHHHH
Q 003661 651 RNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHG--EQAAEILVDFFEK 728 (805)
Q Consensus 651 ~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~--e~lA~aI~~~l~~ 728 (805)
++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|+|. ++++++|.+++..
T Consensus 584 ---dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 584 ---RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred ---hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 5778888 499999999999999999999999999999999999999999999999998774 6899999887754
Q ss_pred hhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 729 CKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 729 l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+..++ .+++++++++.++|||+.++++++++|+.
T Consensus 660 l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~~ 693 (694)
T PRK15179 660 CAADP----GIARKAADWASARFSLNQMIASTVRCYQM 693 (694)
T ss_pred hhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhCC
Confidence 44444 56788999999999999999999999963
No 28
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.6e-35 Score=325.04 Aligned_cols=361 Identities=17% Similarity=0.192 Sum_probs=255.3
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+||+.+++| |..||.+.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 68999999874 45799999999 77777899999999 99875432210 1122
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
.+++++++|.....+ ...+.+ .+ ......+. .+.++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~--~~-~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY--DI-LAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH--HH-HHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 467888877643111 000000 00 01111111 134566666655444 34444556679999999998
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCC
Q 003661 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ 517 (805)
..... ..|...... + ....+..+++.+|.|+++|+...+.++.. .|. .
T Consensus 118 ~~~~~-----~~~~~~~~~--~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~----~ 165 (363)
T cd04955 118 LEWKR-----AKWGRPAKR--Y--LKFGEKLAVKFADRLIADSPGIKEYLKEK-------------------YGR----D 165 (363)
T ss_pred cceee-----cccccchhH--H--HHHHHHHHHhhccEEEeCCHHHHHHHHHh-------------------cCC----C
Confidence 64321 112111110 1 11235667889999999998876633211 111 1
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003661 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 597 (805)
+ .+||||+|...+.+.... .+..+. ++++.++++||+.+.||++.+++|++++.+
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~---------------------~~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEI---------------------LKKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhh---------------------HHhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 899999998776541111 112333 234578899999999999999999998754
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHH-HcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCC-CCC
Q 003661 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLID-QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALY-EAF 675 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~-~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~-E~f 675 (805)
+++|+++|+++.. ..+.+.+. .+++.++|+|+| .++.+++..+++. +|++++||.. |+|
T Consensus 221 ---~~~l~ivG~~~~~-----------~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~~ 281 (363)
T cd04955 221 ---GKKLVIVGNADHN-----------TPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGGT 281 (363)
T ss_pred ---CceEEEEcCCCCc-----------chHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCCC
Confidence 7999999998542 12233333 677889999999 7777899999995 9999999998 999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003661 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 755 (805)
|++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|..++ +|++.+.++++++++.+.++|||+.
T Consensus 282 ~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~~ 353 (363)
T cd04955 282 NPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWEK 353 (363)
T ss_pred ChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999966 7999988765 888886555 8999999999999999988999999
Q ss_pred HHHHHHHHHH
Q 003661 756 YSQRLLTLTG 765 (805)
Q Consensus 756 ~a~~ll~Ly~ 765 (805)
++++++++|+
T Consensus 354 ~~~~~~~~y~ 363 (363)
T cd04955 354 IADQYEELYK 363 (363)
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 29
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=7e-37 Score=322.26 Aligned_cols=362 Identities=17% Similarity=0.232 Sum_probs=278.5
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
++|+++|+|.| |.+||.+.++. .|++.|-+.||.|. ++|..+.+..|-.+-
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 57999999999 67899999999 89999999999999 999988777654322
Q ss_pred ccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEE
Q 003661 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGN--IVASLLAHKLGVTQCTI 434 (805)
Q Consensus 357 ~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~--lva~llar~lgip~v~t 434 (805)
+++.+++.+|+.. .++...+|-+...+.-....+++ ++..|||+|.+.+. --+.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v--------~~n~tT~ptv~~~~Pllr~i~lr---E~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVV--------GYNQTTFPTVFSDFPLLRPILLR---ERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeee--------eecccchhhhhccCcccchhhhh---hceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 2357888887753 12222233222222222222333 37999999998874 46777889999999999
Q ss_pred ecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCC
Q 003661 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (805)
Q Consensus 435 ~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~ 514 (805)
-|++.. ..+..--....... ..+...|.+||+|+...++ + .+...++
T Consensus 121 dHSlfG----fad~~si~~n~ll~---------~sL~~id~~IcVshtsken---t----------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFG----FADIGSILTNKLLP---------LSLANIDRIICVSHTSKEN---T----------------VLRGALA- 167 (426)
T ss_pred cccccc----ccchhhhhhcceee---------eeecCCCcEEEEeecCCCc---e----------------EEEeccC-
Confidence 999632 22222111111111 3567899999999876552 1 1122334
Q ss_pred CCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHH
Q 003661 515 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 594 (805)
Q Consensus 515 ~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 594 (805)
+.|+.+|||.++.+.|.|...... +.+...|+.++||...||++.|+++..+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 679999999999999999654311 3344789999999999999999999999
Q ss_pred hHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCC
Q 003661 595 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 674 (805)
Q Consensus 595 l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~ 674 (805)
+.+.+|+++++|+||||. ...+++..+++.++++|.++| .++.+++-+.+++ .|+|+.||..|+
T Consensus 220 vc~~~p~vrfii~GDGPk-----------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTEa 283 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK-----------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTEA 283 (426)
T ss_pred HHhcCCCeeEEEecCCcc-----------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHHH
Confidence 999999999999999986 246778888999999999999 7888999999996 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003661 675 FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 754 (805)
Q Consensus 675 fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 754 (805)
||++++|||+||+|||+|+.||++|++-++ . .......++++++++.+.+.++...|. .--+++.+-|+|+
T Consensus 284 fc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~-i~~~~~~~~dl~~~v~~ai~~~~~~p~-------~~h~~v~~~y~w~ 354 (426)
T KOG1111|consen 284 FCMVIVEAASCGLPVVSTRVGGIPEVLPED-M-ITLGEPGPDDLVGAVEKAITKLRTLPL-------EFHDRVKKMYSWK 354 (426)
T ss_pred HHHHHHHHHhCCCEEEEeecCCccccCCcc-c-eeccCCChHHHHHHHHHHHHHhccCch-------hHHHHHHHhccHH
Confidence 999999999999999999999999999664 2 223444799999999999887777754 2344677889999
Q ss_pred HHHHHHHHHH
Q 003661 755 IYSQRLLTLT 764 (805)
Q Consensus 755 ~~a~~ll~Ly 764 (805)
..+++.+.+|
T Consensus 355 dVa~rTekvy 364 (426)
T KOG1111|consen 355 DVAERTEKVY 364 (426)
T ss_pred HHHHHHHHHH
Confidence 9999999996
No 30
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=3.9e-35 Score=333.43 Aligned_cols=394 Identities=14% Similarity=0.119 Sum_probs=268.3
Q ss_pred CCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCc--
Q 003661 295 GYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKG-- 372 (805)
Q Consensus 295 G~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~-- 372 (805)
|+-..||.+..+..+|-++++...+.=+-.|+.|.-+|.+++|......|..+-...-.-.+.++..+-+++-..+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (578)
T PRK15490 169 GSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDAT 248 (578)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcc
Confidence 445579999999988876655544444446777777788999997766664442211111233334444444211111
Q ss_pred ----ccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE-EecCCCcccCCCCh
Q 003661 373 ----VVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSD 447 (805)
Q Consensus 373 ----~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~-t~H~l~~~k~~~s~ 447 (805)
.++.+++.. .|- ..+-...+..+++ ..+|||||+|...+++.+.++++..|+|+++ +.|+..... ...
T Consensus 249 ~~~~~~~~~~~~~--~~~-~~~~~~~l~~~ir--~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~--~~r 321 (578)
T PRK15490 249 IESPELRLLLSHL--PPV-CKYGIKHLVPHLC--ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV--RKR 321 (578)
T ss_pred ccchHHHHHHhcC--ChH-HHHHHHHHHHHHH--HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc--hhh
Confidence 111111110 000 1111112222333 2589999999988888889999999999965 466521110 000
Q ss_pred hhhhhcccccccchhhhHhHHHhhcCCE------EEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEE
Q 003661 448 IYWKNLDDKYHFSCQFTADLIAMNHTDF------IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI 521 (805)
Q Consensus 448 ~~~~~~~~~y~~~~~~~~e~~a~~~AD~------IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~V 521 (805)
.+.. +...+..++. +++.|....+.+.+ ..+++ +.|+.+
T Consensus 322 ----~~~~----------e~~~~~~a~~i~~~sd~v~~s~~v~~~l~~-------------------~lgip--~~KI~V 366 (578)
T PRK15490 322 ----LFKP----------EYEPLYQALAVVPGVDFMSNNHCVTRHYAD-------------------WLKLE--AKHFQV 366 (578)
T ss_pred ----HHHH----------HHHHhhhhceeEecchhhhccHHHHHHHHH-------------------HhCCC--HHHEEE
Confidence 0001 1112223333 44444433331111 11333 679999
Q ss_pred ecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC
Q 003661 522 VSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL 601 (805)
Q Consensus 522 IpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~ 601 (805)
||||+|...|.|.......... +...++ +++.++|+++||+.+.||...+++++.++.+..|+
T Consensus 367 IyNGVD~~rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pd 429 (578)
T PRK15490 367 VYNGVLPPSTEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPA 429 (578)
T ss_pred EeCCcchhhcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCC
Confidence 9999999988775432110000 001233 45668999999999999999999999998888899
Q ss_pred eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHH
Q 003661 602 VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVE 681 (805)
Q Consensus 602 v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlE 681 (805)
++|+|+|+|+. .++++++++++++.++|+|+|++ .++..+|+. +|+||+||.+|+||++++|
T Consensus 430 irLvIVGdG~~-----------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLE 491 (578)
T PRK15490 430 TRFVLVGDGDL-----------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIE 491 (578)
T ss_pred eEEEEEeCchh-----------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHH
Confidence 99999999954 46788999999999999999942 467888885 9999999999999999999
Q ss_pred HHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003661 682 AMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 682 AMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll 761 (805)
||+||+|||+|+.||..|+|.+|.+|++++++|++++++++..+ .++..+.+.+..|+++|++++.++|||+.++++|.
T Consensus 492 AMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ 570 (578)
T PRK15490 492 AQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFV 570 (578)
T ss_pred HHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 99999999999999999999999999999999999988876432 33445555667899999999999999999999999
Q ss_pred HHHHH
Q 003661 762 TLTGV 766 (805)
Q Consensus 762 ~Ly~~ 766 (805)
++|..
T Consensus 571 ki~~~ 575 (578)
T PRK15490 571 KTIAS 575 (578)
T ss_pred HHHHh
Confidence 99853
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=1.8e-35 Score=329.59 Aligned_cols=287 Identities=19% Similarity=0.203 Sum_probs=214.6
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 403 ~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
..+||+||+|++....+ ..+++..++|+|.+.|+..... ....|+ .....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------------~~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVWD-------------FLQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHHH-------------HHHHHHHhCCEEeecHHH
Confidence 35899999998765332 2233334899999999743211 111111 112356789999888844
Q ss_pred HHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCC--CCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF--PYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~--p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 560 (805)
.+. .++. ..++ +||||+|..... +...... ...++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~----------------~~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADI----------------EYILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHH----------------HHHHH
Confidence 322 1222 3455 999999975321 1111111 12234
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE
Q 003661 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 561 ~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V 640 (805)
.+|+ ++++++|+++||+++.||++.++++++.+.+..++++|+++|+|+... .+ ..+.+.++.+..++.++|
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~---~~---~~~~~~~~~~~~~~~~~v 254 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDD---PE---GWIVYEEVLEYAEGDPDI 254 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCC---ch---hHHHHHHHHHHhCCCCCe
Confidence 5676 678899999999999999999999999998877899999999997521 11 122344555567788899
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHH
Q 003661 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE 720 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~ 720 (805)
.|+|... ++.+++..+++ ++|+||+||.+|+||++++||||||+|||+|+.||..++|.++.+|++++ +++++++
T Consensus 255 ~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a~ 329 (372)
T cd03792 255 HVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAAV 329 (372)
T ss_pred EEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHHH
Confidence 9998431 26688888888 59999999999999999999999999999999999999999999999987 4678888
Q ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 721 ILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 721 aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+|.+++ .|++.+++|+++|++.+.++|||+.++++++++|+.
T Consensus 330 ~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 330 RILYLL----RDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 886655 899999999999999998999999999999999864
No 32
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=6.2e-35 Score=317.07 Aligned_cols=372 Identities=18% Similarity=0.210 Sum_probs=263.5
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++++.+ |..||.+.++. +|++.|+++||+|+ ++|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6888887764 56799999999 77777899999999 887653322100 0000
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~--~lva~llar~lgip~v~t~ 435 (805)
+.......... . .......................+||+||+|.... ...+...++..++|++++.
T Consensus 52 -~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSINV--A---------YGLNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeecccch--h---------hhhhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 00000000000 0 00000000000111112222245899999987433 4556667778899999999
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCC
Q 003661 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~ 515 (805)
|+......... ..+. .....+..+...++.++.++++|......... + ..
T Consensus 120 ~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~---------------------~--~~ 169 (375)
T cd03821 120 HGMLDPWALPH-KALK------KRLAWFLFERRLLQAAAAVHATSEQEAAEIRR---------------------L--GL 169 (375)
T ss_pred ccccccccccc-chhh------hHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh---------------------h--CC
Confidence 98533221000 0010 01111223456788999999999766542111 1 12
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003661 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 595 (805)
..++.+||||+|.+.+.+...... ++.++. +.++++|+++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGR-------------------RRKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhh-------------------hhhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 568999999999988866443221 122333 56789999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003661 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~f 675 (805)
.+.+++++|+++|.+.. .....+..+++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 229 ~~~~~~~~l~i~G~~~~---------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~~ 294 (375)
T cd03821 229 AERFPDWHLVIAGPDEG---------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSENF 294 (375)
T ss_pred hhhcCCeEEEEECCCCc---------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCCC
Confidence 98889999999998765 22345556678899999999999 6777899999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003661 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 755 (805)
|++++|||+||+|||+|+.||..+++.+ .+|+++++ +.++++++|.+++ +|++.++++++++++.+.++|||+.
T Consensus 295 ~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~ 368 (375)
T cd03821 295 GIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSWTA 368 (375)
T ss_pred CcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999988 78998865 5699999996665 8999999999999999999999999
Q ss_pred HHHHHH
Q 003661 756 YSQRLL 761 (805)
Q Consensus 756 ~a~~ll 761 (805)
++++++
T Consensus 369 ~~~~~~ 374 (375)
T cd03821 369 IAQQLL 374 (375)
T ss_pred HHHHhh
Confidence 999886
No 33
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=2.5e-35 Score=322.88 Aligned_cols=346 Identities=19% Similarity=0.242 Sum_probs=259.6
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccc
Q 003661 298 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKW 377 (805)
Q Consensus 298 dtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~ 377 (805)
+.||.+.++. +|+++|+++||+|. +++...+.. ... ...++.++++++...+
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~----~~~~~~~~~~~~~~~~------ 59 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AEL----EAEGSRHIKLPFISKN------ 59 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHH----HhcCCeEEEccccccc------
Confidence 4599999999 77777899999999 887532111 111 1124566666654321
Q ss_pred cccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhccccc
Q 003661 378 ISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKY 457 (805)
Q Consensus 378 isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y 457 (805)
.+..+. +.....+.+. +.+||+||+|+....+.+.++++..++|++.+.|+......
T Consensus 60 -----~~~~~~-~~~~l~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 60 -----PLRILL-NVARLRRLIR---EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred -----hhhhHH-HHHHHHHHHH---HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 111111 1112222222 24799999998877777788888889999999998532110
Q ss_pred ccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHH
Q 003661 458 HFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEE 537 (805)
Q Consensus 458 ~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~ 537 (805)
.....+..+|.++++|....+.+.+. .+++ ..++.+||||+|...|.+....
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~~~-------------------~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIREN-------------------YGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHHHh-------------------cCCC--hhhEEEecCCccccccCccccc
Confidence 01234678999999998776632211 2333 5689999999999888654322
Q ss_pred HHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCcc
Q 003661 538 KRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD 617 (805)
Q Consensus 538 ~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d 617 (805)
.... ...++.++. ++++++|+++||+.+.||++.+++++.++++..++++|+++|+++..
T Consensus 169 ~~~~--------------~~~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~---- 228 (355)
T cd03819 169 PERI--------------LALAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR---- 228 (355)
T ss_pred hHHH--------------HHHHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCccc----
Confidence 1110 012334454 56788999999999999999999999999887789999999998652
Q ss_pred HHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCccc
Q 003661 618 LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGG 696 (805)
Q Consensus 618 ~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS-~~E~fGltvlEAMA~GlPVVat~~GG 696 (805)
....+.+.+.++++++.++|.|+|. .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.||
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~ 298 (355)
T cd03819 229 ---RFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG 298 (355)
T ss_pred ---chHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC
Confidence 1334556678888999899999994 4578899995 99999999 79999999999999999999999999
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003661 697 PAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 697 ~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 755 (805)
..|++.++.+|++++++|+++++++|...+ ..+++.+.+++++|++.+.++|||+.
T Consensus 299 ~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 299 ARETVRPGETGLLVPPGDAEALAQALDQIL---SLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred cHHHHhCCCceEEeCCCCHHHHHHHHHHHH---hhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999996544 26899999999999999999999985
No 34
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=8.3e-34 Score=310.09 Aligned_cols=271 Identities=21% Similarity=0.282 Sum_probs=223.9
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDIIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+||+|+... ..++.+.++..++|++++.|+...... ... ......++.+|.++++|..
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS--PDA---------------IDLDEKLARADFVVAISEY 140 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc--Cch---------------HHHHHHHhhCCEEEECCHH
Confidence 5799999998754 445555566668999999997432110 000 1234578899999999998
Q ss_pred HHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 562 (805)
..+.++... |.. ..++.++|||+|.+.+.+....
T Consensus 141 ~~~~l~~~~-------------------~~~--~~~~~vi~~~~d~~~~~~~~~~------------------------- 174 (355)
T cd03799 141 NRQQLIRLL-------------------GCD--PDKIHVVHCGVDLERFPPRPPP------------------------- 174 (355)
T ss_pred HHHHHHHhc-------------------CCC--cccEEEEeCCcCHHHcCCcccc-------------------------
Confidence 776433221 222 6689999999998877554300
Q ss_pred ccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003661 563 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 563 G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~f 642 (805)
...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. ...+.+.++++++.++|+|
T Consensus 175 ---~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~ 240 (355)
T cd03799 175 ---PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL-----------RDELEALIAELGLEDRVTL 240 (355)
T ss_pred ---ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc-----------HHHHHHHHHHcCCCCeEEE
Confidence 03567889999999999999999999999988788999999999865 3567788888999999999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003661 643 ISSQMNRVRNGELYRYICDTKGAFVQPALY------EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 716 (805)
Q Consensus 643 lG~~~~~v~~~el~~~la~aaDvfV~PS~~------E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e 716 (805)
.| .++.+++..+++. +|+++.||.. |+||++++|||+||+|+|+++.|+..|++.++.+|++++++|++
T Consensus 241 ~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~ 315 (355)
T cd03799 241 LG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPE 315 (355)
T ss_pred CC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCCHH
Confidence 99 7778899999995 9999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003661 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRL 760 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~l 760 (805)
+++++|.+++ +|++.+.+|+++|++.+.++|||+..++++
T Consensus 316 ~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 316 ALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 9999997766 799999999999999999999999988763
No 35
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=1.4e-33 Score=307.44 Aligned_cols=387 Identities=18% Similarity=0.245 Sum_probs=272.6
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++|+.+.+ |..||.+.++. .++++|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6899997765 34489999999 67777899999999 8886543322111000 011122
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~--~lva~llar~lgip~v~t~ 435 (805)
.++++.+++...... ..+.. .++.+ ..|.......+.. ...+||+||++.+.. ...+..+++..++|+++++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLK--RLLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHH--HHHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 467777776643211 00000 01111 1222222323321 246899999998432 4556666777799999999
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCC
Q 003661 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~ 515 (805)
|+.............. ....+.+ ....+...++.+|.++++|....+.+. ..++.
T Consensus 132 h~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKN-GSLLYRL--LRKLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCccc-cchHHHH--HHHHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 9864322111000000 0000011 112356678999999999988776322 11222
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003661 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 595 (805)
..++.++|||+|...+.+......+ ...+. ..+++.|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877655432211 11122 46778999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003661 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~f 675 (805)
.+. ++++|+++|+|+. ...+.+.+...++ ++|.++| .++.+++..+++. +|++++|+..|++
T Consensus 246 ~~~-~~~~l~i~G~~~~-----------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~ 307 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE-----------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGPA 307 (394)
T ss_pred hhc-CCeEEEEeCCccc-----------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCccc
Confidence 876 8999999999865 2455565666665 6799999 7778899999995 9999999998875
Q ss_pred -----cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Q 003661 676 -----GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEK 750 (805)
Q Consensus 676 -----GltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ 750 (805)
|++++|||+||+|||+++.+|..+++.++.+|++++++|+++++++|.+++ .|++.+++|++++++.+.++
T Consensus 308 ~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~ 383 (394)
T cd03794 308 FEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEEK 383 (394)
T ss_pred ccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHh
Confidence 888999999999999999999999999989999999999999999997665 89999999999999999889
Q ss_pred CCHHHHHHHHH
Q 003661 751 YTWKIYSQRLL 761 (805)
Q Consensus 751 ysw~~~a~~ll 761 (805)
|||+.++++++
T Consensus 384 ~s~~~~~~~~~ 394 (394)
T cd03794 384 FSREKLAERLL 394 (394)
T ss_pred hcHHHHHHhcC
Confidence 99999998863
No 36
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.3e-33 Score=308.74 Aligned_cols=354 Identities=19% Similarity=0.237 Sum_probs=256.4
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++..+ |+.||.+.++. +|+++|.++||+|+ |++......... . ..
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~---~~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------E---ER 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------h---hc
Confidence 6889987665 56799999999 77777899999999 887653322110 0 11
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
.+..+.+++..... ...+.... ....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNV----------ASTPFSPS----FFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeeccccc----------ccccccHH----HHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 23355555432210 01111011 111111 2245899999998765332222333368899999996
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCC
Q 003661 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ 517 (805)
..... .. ....+. ..+...++.+|.|+++|+...+..... ..+..
T Consensus 116 ~~~~~----~~----~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~~----------------------~~~~~ 160 (357)
T cd03795 116 DIVKQ----KL----LLKLYR-----PLQRRFLRRADAIVATSPNYAETSPVL----------------------RRFRD 160 (357)
T ss_pred hhhcc----ch----hhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHHh----------------------cCCcc
Confidence 32111 00 001111 124457899999999998765522111 11145
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003661 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 597 (805)
++.+||||+|...+.+...... ..... +.++++|+++||+.+.||++.++++++++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEE--------------------AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhh--------------------HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 8899999999987765433211 01111 457789999999999999999999999885
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCC
Q 003661 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAF 675 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~E~f 675 (805)
+++|+|+|+|+. ...+.+.++++++.++|.|+| .++..++..+++. +|++++||. .|+|
T Consensus 218 ---~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~~ 278 (357)
T cd03795 218 ---DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEAF 278 (357)
T ss_pred ---CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCccccccc
Confidence 799999999854 356778888899999999999 7777899999995 999999996 6999
Q ss_pred cHHHHHHHHcCCcEEEcCcccccccccc-CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003661 676 GLTVVEAMTCGLPTFATCKGGPAEIIVN-GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 754 (805)
Q Consensus 676 GltvlEAMA~GlPVVat~~GG~~EiI~d-g~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 754 (805)
|++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.++|||+
T Consensus 279 g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (357)
T cd03795 279 GIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTAD 354 (357)
T ss_pred chHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcchH
Confidence 9999999999999999999999999886 99999999999999999997766 899999999999999999999999
Q ss_pred HHH
Q 003661 755 IYS 757 (805)
Q Consensus 755 ~~a 757 (805)
.++
T Consensus 355 ~~~ 357 (357)
T cd03795 355 RMV 357 (357)
T ss_pred hhC
Confidence 764
No 37
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5.7e-35 Score=336.85 Aligned_cols=292 Identities=18% Similarity=0.256 Sum_probs=233.1
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCC-C-Chhhhhh--cccc-cccchhhhHhHHHhhcCCEEE
Q 003661 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYP-D-SDIYWKN--LDDK-YHFSCQFTADLIAMNHTDFII 477 (805)
Q Consensus 404 ~kPDIIh~h~~~-~~lva~llar~lgip~v~t~H~l~~~k~~-~-s~~~~~~--~~~~-y~~~~~~~~e~~a~~~AD~II 477 (805)
.++|+||+|... +++++.++++..|+|+|+|.|+....... . ....|.. +... .++. ...++.+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFF--ESLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHH--HHHHHHHHHhCCEEE
Confidence 589999999754 46788888999999999999986321100 0 0000000 0000 0111 123567889999999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhh
Q 003661 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (805)
Q Consensus 478 t~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 557 (805)
++|....+.. ...|++ ..|+.|||||+|.+.|.+.....
T Consensus 250 ~~s~~~~~~~--------------------~~~g~~--~~ki~vIpNgid~~~f~~~~~~~------------------- 288 (475)
T cd03813 250 TLYEGNRERQ--------------------IEDGAD--PEKIRVIPNGIDPERFAPARRAR------------------- 288 (475)
T ss_pred ecCHHHHHHH--------------------HHcCCC--HHHeEEeCCCcCHHHcCCccccc-------------------
Confidence 9998765421 112343 66999999999998886643210
Q ss_pred hhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC
Q 003661 558 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN 637 (805)
Q Consensus 558 ~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~ 637 (805)
.++++++|+++||+.+.||++.+++|++.+.+..|+++|+|+|+++.. ..+.++++++++++++.
T Consensus 289 --------~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~-------~~~~~e~~~li~~l~l~ 353 (475)
T cd03813 289 --------PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDED-------PEYAEECRELVESLGLE 353 (475)
T ss_pred --------cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcC-------hHHHHHHHHHHHHhCCC
Confidence 045678999999999999999999999999888899999999998531 14567889999999999
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CceEEEEC
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN------GKSGYHID 711 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~d------g~~G~li~ 711 (805)
++|+|+| . .++..+++ ++|++|+||..|+||++++||||||+|||+|+.||+.|++.+ |.+|++++
T Consensus 354 ~~V~f~G----~---~~v~~~l~-~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 354 DNVKFTG----F---QNVKEYLP-KLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVP 425 (475)
T ss_pred CeEEEcC----C---ccHHHHHH-hCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEEC
Confidence 9999999 2 35677777 599999999999999999999999999999999999999998 67999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 712 PYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 712 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
|.|+++++++|.+++ +|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 426 ~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 426 PADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999997665 89999999999999999999999999999999984
No 38
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.5e-33 Score=307.05 Aligned_cols=363 Identities=21% Similarity=0.299 Sum_probs=260.7
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++.... |..||.+.++. .|+++|+++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6889987664 45699999999 77778899999999 888764322110 00
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~-~lva~llar~lgip~v~t~H 436 (805)
....+...+......+ +..... .....+.+ . ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~-~--~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALPP-----RRRVRRLL-D--AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eecccc-----hhhHHHHH-H--hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222222111110 000000 01111112 1 34799999986654 46677778889999999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~ 516 (805)
+......... ..... . .+ .........+.+|.+++.|....+... ... .
T Consensus 116 ~~~~~~~~~~--~~~~~-~--~~--~~~~~~~~~~~~d~i~~~s~~~~~~~~----------------------~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY--GLGPL-S--WL--AWAYLRWFHNRADRVLVPSPSLADELR----------------------ARG--F 164 (364)
T ss_pred cChHHHhhhc--ccchH-h--Hh--hHHHHHHHHHhCCEEEeCCHHHHHHHh----------------------ccC--C
Confidence 7532110000 00000 0 00 012234567899999999987765111 011 4
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.++.+++||+|.+.|.|....... ++.++ +.++++|+++|++.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~------------------~~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEAL------------------RARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHH------------------HHHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 578999999999888765433211 12222 356788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003661 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fG 676 (805)
+. ++++|+++|+++.. ..++ +..++|.|+| .++.+++..+++. +|+++.||..|+||
T Consensus 224 ~~-~~~~l~i~G~~~~~-----------~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~~ 280 (364)
T cd03814 224 RR-PPVRLVIVGDGPAR-----------ARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETFG 280 (364)
T ss_pred hc-CCceEEEEeCCchH-----------HHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccCC
Confidence 77 89999999998651 2222 4567899999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003661 677 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIY 756 (805)
Q Consensus 677 ltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~ 756 (805)
++++|||+||+|||+++.|+..|++.++.+|+++++.|.++++++|.+++ .||+.+++|++++++.+ ++|+|+.+
T Consensus 281 ~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~~ 355 (364)
T cd03814 281 LVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEAF 355 (364)
T ss_pred cHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHHH
Confidence 99999999999999999999999999999999999999999999997665 89999999999999998 88999999
Q ss_pred HHHHHHHHH
Q 003661 757 SQRLLTLTG 765 (805)
Q Consensus 757 a~~ll~Ly~ 765 (805)
+++++++|+
T Consensus 356 ~~~~~~~~~ 364 (364)
T cd03814 356 LDNLLEAYR 364 (364)
T ss_pred HHHHHHhhC
Confidence 999999873
No 39
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=4.1e-33 Score=299.84 Aligned_cols=374 Identities=22% Similarity=0.333 Sum_probs=272.6
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++... |..||...++. .|++.|.+.||+|. +++.......... ....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~------~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEE------EVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCcee------eecC-
Confidence 6889987764 33689999999 77777888999999 8887643322110 0000
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
......+... ..........+... ...+.. ..+||+||++.+.........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~--~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALR-LRRLLR--RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHH-HHHHhh--hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 00000011111112 222222 24799999999887555557788899999999998
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCC
Q 003661 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ 517 (805)
......... ...........+...++.+|.+++.|....+.+.+.. +.. ..
T Consensus 118 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~-------------------~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE--------LGLLLKLARALERRALRRADRIIAVSEATREELRELG-------------------GVP--PE 168 (374)
T ss_pred chhhccccc--------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhcC-------------------CCC--CC
Confidence 644321111 0000011112345678899999999987766332221 111 35
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003661 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 597 (805)
++.++|||+|...+.+.. ...+ ...+. ..+++.|+++|++.+.||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998876543 1110 11111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcH
Q 003661 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 677 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGl 677 (805)
..++++|+++|++. ....+.+.+++++..++|.++| .++.+++..+++. +|+++.|+..|++|+
T Consensus 227 ~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~~ 290 (374)
T cd03801 227 EYPDVRLVIVGDGP-----------LREELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFGL 290 (374)
T ss_pred hcCCeEEEEEeCcH-----------HHHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhccccc
Confidence 88899999999774 3466777888889999999999 6777899999996 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003661 678 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 678 tvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a 757 (805)
+++|||+||+|||+++.++..|++.++.+|+++++.|+++++++|.+++ .|++.+.+|++++++.+.+.|||+.++
T Consensus 291 ~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (374)
T cd03801 291 VLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRVA 366 (374)
T ss_pred hHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999999999999999999999999997665 899999999999999999999999999
Q ss_pred HHHHHHHH
Q 003661 758 QRLLTLTG 765 (805)
Q Consensus 758 ~~ll~Ly~ 765 (805)
+++.++|+
T Consensus 367 ~~~~~~~~ 374 (374)
T cd03801 367 ARTEEVYY 374 (374)
T ss_pred HHHHHhhC
Confidence 99998863
No 40
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=2.8e-33 Score=304.21 Aligned_cols=333 Identities=17% Similarity=0.175 Sum_probs=237.9
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||++|++..++- +.|..||.+.++. +|++.|.++||+|+ +++...+.... ..
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 7999999876531 3467899999999 66777799999999 88865432110 00
Q ss_pred ccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003661 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 357 ~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H 436 (805)
......+.. ................ ...+.. ..+||+||+|.+..... +++..++|.|.+.|
T Consensus 54 ---~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~--~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLR---------LDAPGRDRAEAEALAL-AERALA--AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCcc---------cccchhhHhhHHHHHH-HHHHHh--cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 011100000 0000000001111111 122222 35799999998877554 56778999999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~ 516 (805)
+...... .+ .......++.++++|....+.. .. .
T Consensus 116 ~~~~~~~-----~~---------------~~~~~~~~~~~~~~s~~~~~~~------------------------~~--~ 149 (335)
T cd03802 116 GPPDPEL-----LK---------------LYYAARPDVPFVSISDAQRRPW------------------------PP--L 149 (335)
T ss_pred CCCCccc-----ch---------------HHHhhCcCCeEEEecHHHHhhc------------------------cc--c
Confidence 8543210 00 1134567788999997765410 01 1
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.++.+||||+|.+.|.+. +.+++.|+++||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578899999999877551 2356789999999999999999999764
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC-CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC-CCC
Q 003661 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK-LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEA 674 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~-L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~-~E~ 674 (805)
.+++|+++|+++.. ..+.....+.. +.++|.|+| .++..++..+++. +|++|+||. .|+
T Consensus 196 ---~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E~ 256 (335)
T cd03802 196 ---AGIPLKLAGPVSDP-----------DYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEEP 256 (335)
T ss_pred ---cCCeEEEEeCCCCH-----------HHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccCC
Confidence 36899999999651 22333333333 568999999 6777899999995 999999997 599
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHH
Q 003661 675 FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWK 754 (805)
Q Consensus 675 fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~ 754 (805)
||++++||||||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||+
T Consensus 257 ~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~~ 324 (335)
T cd03802 257 FGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSAA 324 (335)
T ss_pred cchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCHH
Confidence 99999999999999999999999999999999999985 999999996653 332 256788888999999
Q ss_pred HHHHHHHHHHH
Q 003661 755 IYSQRLLTLTG 765 (805)
Q Consensus 755 ~~a~~ll~Ly~ 765 (805)
.++++|+++|+
T Consensus 325 ~~~~~~~~~y~ 335 (335)
T cd03802 325 RMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHhC
Confidence 99999999984
No 41
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=5.4e-33 Score=303.26 Aligned_cols=358 Identities=17% Similarity=0.212 Sum_probs=251.8
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++|++.. |..||.+.++. +|+++|.+.||+|+ +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998653 45799999999 77777899999999 776543221100000 00
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc---hHHHH---HHHHHcCCcE
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG---NIVAS---LLAHKLGVTQ 431 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~---~lva~---llar~lgip~ 431 (805)
....... ......+ ....+. .. ..+||+||++.+.+ ...+. ...+..++|+
T Consensus 52 ~~~~~~~---------------~~~~~~~-----~~~~~~-~~--~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV---------------LDNPLDY-----RRAARA-IR--LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee---------------cCCchhH-----HHHHHH-Hh--hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0000111 111222 22 24799999987432 12222 2234589999
Q ss_pred EEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecC
Q 003661 432 CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 511 (805)
Q Consensus 432 v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~g 511 (805)
|.++|+..... . .+ .........++.+|.|+++|..... +...
T Consensus 109 i~~~h~~~~~~----~-~~----------~~~~~~~~~~~~~d~ii~~s~~~~~---~~~~------------------- 151 (366)
T cd03822 109 VVTLHTVLLHE----P-RP----------GDRALLRLLLRRADAVIVMSSELLR---ALLL------------------- 151 (366)
T ss_pred EEEEecCCccc----c-ch----------hhhHHHHHHHhcCCEEEEeeHHHHH---HHHh-------------------
Confidence 99999861100 0 00 0011234567899999999733332 1100
Q ss_pred CCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHH
Q 003661 512 IDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEW 591 (805)
Q Consensus 512 i~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA 591 (805)
.....++.+||||+|...+.+..... ..+. ..++++|+++|++.+.||++.+++|
T Consensus 152 -~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 -RAYPEKIAVIPHGVPDPPAEPPESLK----------------------ALGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred -hcCCCcEEEeCCCCcCcccCCchhhH----------------------hhcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 11146899999999987665433211 0111 4578899999999999999999999
Q ss_pred HHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC
Q 003661 592 YGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL 671 (805)
Q Consensus 592 ~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~ 671 (805)
+.++.+..++++|+++|++..... .......++++++++.++|.|+|. .++.+++..+++. +|++++||.
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~------~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps~ 276 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE------RYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPYR 276 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh------hhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEeccc
Confidence 999998888999999999865210 000111145788899999999982 3778999999996 999999999
Q ss_pred CC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q 003661 672 YE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 749 (805)
Q Consensus 672 ~E--~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~ 749 (805)
+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.+
T Consensus 277 ~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~~ 351 (366)
T cd03822 277 SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYARA 351 (366)
T ss_pred ccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHhh
Confidence 99 99999999999999999999999 77778888999999999999999997665 8999999999999999966
Q ss_pred hCCHHHHHHHHHHHHH
Q 003661 750 KYTWKIYSQRLLTLTG 765 (805)
Q Consensus 750 ~ysw~~~a~~ll~Ly~ 765 (805)
|||+.+++++.++|+
T Consensus 352 -~s~~~~~~~~~~~~~ 366 (366)
T cd03822 352 -MSWERVAERYLRLLA 366 (366)
T ss_pred -CCHHHHHHHHHHHhC
Confidence 999999999999873
No 42
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=3e-33 Score=306.28 Aligned_cols=358 Identities=20% Similarity=0.230 Sum_probs=254.8
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++++. ..||.+.++. +|++.|+++||+|+ +++...... .. . ...
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-~~----~---~~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGESE-VK----P---PID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCCC-cc----c---hhh-
Confidence 477776543 2589999999 67777899999999 887532111 00 0 000
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEec
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~-lgip~v~t~H 436 (805)
......++... ..+.++..+ .....+.. +.+||+||+|....+.++.+++.. .++|++.+.|
T Consensus 49 -~~~~~~~~~~~------------~~~~~~~~~--~~~~~~~~--~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSK------------NPLSFLLAL--WKLRKILR--QFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEecccc------------cchhhHHHH--HHHHHHHH--hcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 11111222211 011111111 11122222 247999999988776666665554 3678999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~ 516 (805)
+..... .. .. .........++.++++|....+...+. .+++ .
T Consensus 112 ~~~~~~------~~------~~-----~~~~~~~~~~~~~~~~s~~~~~~~~~~-------------------~~~~--~ 153 (360)
T cd04951 112 SKNEGG------RL------RM-----LAYRLTDFLSDLTTNVSKEALDYFIAS-------------------KAFN--A 153 (360)
T ss_pred ccCchh------HH------HH-----HHHHHHhhccCceEEEcHHHHHHHHhc-------------------cCCC--c
Confidence 753211 00 00 111233445777788887665522111 1122 5
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.++.+||||+|...|.+...... ..++.+++ ++++++++++||+.+.||++.+++++.++.
T Consensus 154 ~~~~~i~ng~~~~~~~~~~~~~~-----------------~~~~~~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 154 NKSFVVYNGIDTDRFRKDPARRL-----------------KIRNALGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred ccEEEEccccchhhcCcchHHHH-----------------HHHHHcCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 68999999999887765443221 12344566 667899999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003661 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fG 676 (805)
+..++++|+|+|+|+. .+++.+.++++++.++|.|+|.+ +++..+++. +|++++||..|+||
T Consensus 215 ~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~~ 276 (360)
T cd04951 215 SDYLDIKLLIAGDGPL-----------RATLERLIKALGLSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGFG 276 (360)
T ss_pred hhCCCeEEEEEcCCCc-----------HHHHHHHHHhcCCCCcEEEeccc------ccHHHHHHh-hceEEecccccCCC
Confidence 8888999999999865 35677888888998999999943 367788885 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003661 677 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIY 756 (805)
Q Consensus 677 ltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~ 756 (805)
++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|.++++ .+++.+..++++ ++.+.++|||+.+
T Consensus 277 ~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~~ 350 (360)
T cd04951 277 LVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILK---MSGEERDIIGAR-RERIVKKFSINSI 350 (360)
T ss_pred hHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHHH
Confidence 999999999999999999999999976 8999999999999999977653 577777878777 8888899999999
Q ss_pred HHHHHHHHH
Q 003661 757 SQRLLTLTG 765 (805)
Q Consensus 757 a~~ll~Ly~ 765 (805)
+++|.++|+
T Consensus 351 ~~~~~~~y~ 359 (360)
T cd04951 351 VQQWLTLYT 359 (360)
T ss_pred HHHHHHHhh
Confidence 999999985
No 43
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=4.3e-33 Score=303.00 Aligned_cols=370 Identities=20% Similarity=0.298 Sum_probs=263.9
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++...+ |..||...++. .|+++|+++||+|+ ++|...++..... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~---------~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE---------EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc---------cc
Confidence 6888887654 67899999999 77788899999999 8887654322110 00
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~-~lva~llar~lgip~v~t~H 436 (805)
......+.+.... ......+. +... ...... ..+||+||++.+.. +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~~-------~~~~~~~~----~~~~-~~~~~~--~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFKY-------PDFRLPLP----IPRA-LIIILK--ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccchh-------hhhhcccc----HHHH-HHHHHh--hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 0111111111000 00000111 1111 112222 34799999987654 56677788889999999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhh-hHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQF-TADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~-~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~ 515 (805)
+..... ... ............. ..+...++.+|.+++.|....+.+.+. +.
T Consensus 117 ~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~~--------------------~~--- 168 (374)
T cd03817 117 TMYEDY-THY----VPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLREY--------------------GV--- 168 (374)
T ss_pred CCHHHH-HHH----HhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHhc--------------------CC---
Confidence 753311 000 0000000000011 235667889999999998765522211 22
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHh
Q 003661 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKN 595 (805)
Q Consensus 516 ~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l 595 (805)
..++.++|||+|...+.+...... ++.++. +.+++.|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDE-------------------RRKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHH-------------------HHhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 346899999999988866543321 122343 56778999999999999999999999999
Q ss_pred HccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003661 596 AKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 596 ~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~f 675 (805)
.+..++++|+++|+++. .+.+.++++++++.++|.|+| .++.+++..+++. +|++++||..|++
T Consensus 228 ~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~~ 291 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTETQ 291 (374)
T ss_pred HHhCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccCc
Confidence 88778999999999854 456778888899999999999 6778899999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003661 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 755 (805)
|++++|||+||+|||+++.|+..|++.++.+|+++++.+. +++++|.+++ +|++.+++|++++++.+.+ ++
T Consensus 292 ~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~-~~--- 362 (374)
T cd03817 292 GLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEK-FS--- 362 (374)
T ss_pred ChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHH-HH---
Confidence 9999999999999999999999999999999999998877 8888886555 8999999999999999854 44
Q ss_pred HHHHHHHHHH
Q 003661 756 YSQRLLTLTG 765 (805)
Q Consensus 756 ~a~~ll~Ly~ 765 (805)
.++++.++|+
T Consensus 363 ~~~~~~~~~~ 372 (374)
T cd03817 363 FAKKVEKLYE 372 (374)
T ss_pred HHHHHHHHHh
Confidence 6667777665
No 44
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=5.3e-33 Score=300.79 Aligned_cols=363 Identities=18% Similarity=0.189 Sum_probs=264.5
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++-.. .||.+.++. .|+++|++.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5777765442 389999999 77777889999999 7775432211 11111 1
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEec
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~-lgip~v~t~H 436 (805)
.++.++.++.... ...+. +.....+.+. +.+||+||++.......+.+.+.. .++|++.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~~----~~~~~~~~~~---~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDPG----ALLRLYKLIR---RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccHH----HHHHHHHHHH---hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2456666554321 01111 1112222222 247999999887766666666665 6889999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~ 516 (805)
+...... .|. ... .........+.+|.+++.|....+.... .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~-----~~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRL-----VARLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhH-----HHHHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8643221 010 000 1112345667889999999876652211 1333 5
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.++.++|||+|...+.+....... .++.+|+ ++++++|+++||+.+.||++.+++++..+.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARAR-----------------LREELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHH-----------------HHHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 689999999999877665433221 1244666 667889999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHH-HcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003661 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLID-QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~-~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~f 675 (805)
+..++++|+++|.++.. ........ ++++.++|.|.|.+ +++..+++. +|++++||..|+|
T Consensus 220 ~~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~~ 281 (365)
T cd03807 220 KKFPNARLLLVGDGPDR-----------ANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEGF 281 (365)
T ss_pred HhCCCeEEEEecCCcch-----------hHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCccccC
Confidence 88889999999998652 23334444 78888999999932 467888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003661 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 755 (805)
|++++|||+||+|||+++.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++.+.++|||+.
T Consensus 282 ~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~ 355 (365)
T cd03807 282 PNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIEA 355 (365)
T ss_pred CcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999977 899999999999999997766 8999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 003661 756 YSQRLLTLTG 765 (805)
Q Consensus 756 ~a~~ll~Ly~ 765 (805)
.++++.++|+
T Consensus 356 ~~~~~~~~y~ 365 (365)
T cd03807 356 MVEAYEELYR 365 (365)
T ss_pred HHHHHHHHhC
Confidence 9999999874
No 45
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=2.4e-33 Score=307.62 Aligned_cols=347 Identities=14% Similarity=0.196 Sum_probs=247.8
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++.. ..||.+.++. +++++|++.||+|+ +++...... ...... ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~~----~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDEI----EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHHH----HH
Confidence 577876543 3599999999 66666788999999 887643221 011111 11
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQ-CTIAH 436 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~-v~t~H 436 (805)
.++.+++++.... ..+. +.....+ +.. +.+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~~----~~~~~~~-~~~--~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPLK----YFKKLYK-LIK--KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHHH----HHHHHHH-HHh--cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2456665544321 1111 2222222 222 35899999999877667777777778775 45677
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~ 516 (805)
............. .. ...+...++.+|.++++|....+.+... +. .
T Consensus 113 ~~~~~~~~~~~~~--------~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---------------------~~--~ 158 (358)
T cd03812 113 NTSDSHDKKKKIL--------KY---KVLRKLINRLATDYLACSEEAGKWLFGK---------------------VK--N 158 (358)
T ss_pred cccccccccchhh--------HH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---------------------CC--c
Confidence 6432221100000 00 1224457788999999998776532111 11 5
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.++.+||||+|.+.|.+....... ++..+. ..++++|+|+||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKK------------------RRELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhH------------------HHHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 689999999999887664432211 122333 567899999999999999999999999999
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003661 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fG 676 (805)
+.+++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. +|++|+||..|+||
T Consensus 219 ~~~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~~ 280 (358)
T cd03812 219 KKNPNAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGLP 280 (358)
T ss_pred HhCCCeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCCC
Confidence 8889999999999864 3567888889999999999994 3468888885 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q 003661 677 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 749 (805)
Q Consensus 677 ltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~ 749 (805)
++++||||||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+.++.++..+......
T Consensus 281 ~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~~ 348 (358)
T cd03812 281 LVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLDA 348 (358)
T ss_pred HHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccchh
Confidence 999999999999999999999999988 4677777778999999997666 8999999988888776533
No 46
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=6.3e-33 Score=314.57 Aligned_cols=389 Identities=12% Similarity=0.065 Sum_probs=255.9
Q ss_pred CcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeee
Q 003661 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKV 354 (805)
Q Consensus 275 ~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i 354 (805)
.-.||++++.-- +|.+..+. +++++|+++||+|+ |++...+... +..
T Consensus 2 ~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~~--------~~~ 48 (415)
T cd03816 2 KRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPPH--------DEI 48 (415)
T ss_pred CccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCCC--------HHH
Confidence 346788887522 35566667 67888899999999 8886532211 111
Q ss_pred cCccCeEEEEeccCc-CCcccccccccccchhhHHHHHHHHHH---HHHHHcCCCceEEEEcCCCc---hHHHHHHHHHc
Q 003661 355 YGTKYSDILRVPFRT-EKGVVRKWISRFEVWPYLETYTEDVAV---EIAKELQGKPDLIIGNYSDG---NIVASLLAHKL 427 (805)
Q Consensus 355 ~~~~~v~Ilrvp~~~-~~~~l~~~isr~~i~~~l~~f~~~~~~---~i~~~~~~kPDIIh~h~~~~---~lva~llar~l 427 (805)
....++.+++++..+ ..+. ......+.......... .+.. ..+||+||+|.+.. ..++.++++..
T Consensus 49 ~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~~ 120 (415)
T cd03816 49 LSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLLR 120 (415)
T ss_pred hcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 122467788776643 1110 00111121111111111 1222 24799999987554 34566667778
Q ss_pred CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhcccccccccccccccccccee
Q 003661 428 GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYR 507 (805)
Q Consensus 428 gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~ 507 (805)
++|+|++.|+........ .........++. ...+...++.+|.||++|+...+.+.+
T Consensus 121 ~~~~V~~~h~~~~~~~~~---~~~~~~~~~~~~--~~~e~~~~~~ad~ii~vS~~~~~~l~~------------------ 177 (415)
T cd03816 121 RTKLIIDWHNYGYTILAL---KLGENHPLVRLA--KWYEKLFGRLADYNLCVTKAMKEDLQQ------------------ 177 (415)
T ss_pred CCeEEEEcCCchHHHHhc---ccCCCCHHHHHH--HHHHHHHhhcCCEeeecCHHHHHHHHh------------------
Confidence 999999999853211000 000000001111 123667888999999999987663221
Q ss_pred eecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHH-hhcchhh-hhhhhccccCCCCcEEEEEeeccCCCCH
Q 003661 508 VVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEE-LLYSDVE-NKEHLCVLKDRNKPILFTMARLDRVKNL 585 (805)
Q Consensus 508 ~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~-~l~~~~~-~~~~~G~l~~~~k~vIl~vGRL~~~Kgl 585 (805)
.|++ ..|+.|||||. ...|.|.......... ... .-+++.. .....+.. +++..+++++||+.+.||+
T Consensus 178 --~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~ 247 (415)
T cd03816 178 --FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELF----LKLAKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDF 247 (415)
T ss_pred --hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHH----Hhccccccccccccccceec-CCCceEEEEeccccCCCCH
Confidence 2333 67999999995 4567665433211000 000 0000000 00011221 2345678889999999999
Q ss_pred HHHHHHHHHhHc------cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHH
Q 003661 586 TGLVEWYGKNAK------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYI 659 (805)
Q Consensus 586 ~~LieA~~~l~~------~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~l 659 (805)
+.|++|+..+++ .+|+++|+|+|+|+. .++++++++++++.+.+.+.| +++.+++..+|
T Consensus 248 ~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l 312 (415)
T cd03816 248 GILLDALVAYEKSAATGPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKLL 312 (415)
T ss_pred HHHHHHHHHHHHhhcccccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHH
Confidence 999999999874 347899999999965 467888999999975444556 67789999999
Q ss_pred HccCcEEEeCC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCC---H
Q 003661 660 CDTKGAFVQPA---LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKAD---P 733 (805)
Q Consensus 660 a~aaDvfV~PS---~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~d---p 733 (805)
+. +|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| |
T Consensus 313 ~~-aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~ 385 (415)
T cd03816 313 AS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNR 385 (415)
T ss_pred Hh-CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCH
Confidence 95 99999753 25789999999999999999999999999999999999994 8999999997766 77 9
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003661 734 SYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 734 ~~~~~ms~~ar~~v~~~ysw~~~a~~ll 761 (805)
+.+++|+++|++.. .++|+...++.+
T Consensus 386 ~~~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 386 GKLNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 99999999999997 778876655554
No 47
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1.6e-33 Score=312.86 Aligned_cols=267 Identities=16% Similarity=0.210 Sum_probs=202.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcE--EEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCH
Q 003661 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQ--CTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~llar~lgip~--v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 481 (805)
.+||+||+|.....+.+.++++..++|. +.+.|...... + .+ ....+..+|.++++|.
T Consensus 83 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~-------~-----~~--------~~~~~~~~d~~i~~S~ 142 (359)
T PRK09922 83 TQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK-------K-----HA--------ECKKITCADYHLAISS 142 (359)
T ss_pred cCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc-------c-----hh--------hhhhhhcCCEEEEcCH
Confidence 4799999998766666777777777654 44455321100 0 00 0112368999999998
Q ss_pred HHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003661 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 482 ~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 561 (805)
...+.+. ..|++ ..++.+||||+|.+.+.....
T Consensus 143 ~~~~~~~--------------------~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------- 175 (359)
T PRK09922 143 GIKEQMM--------------------ARGIS--AQRISVIYNPVEIKTIIIPPP------------------------- 175 (359)
T ss_pred HHHHHHH--------------------HcCCC--HHHEEEEcCCCCHHHccCCCc-------------------------
Confidence 7765321 12443 568999999999654432110
Q ss_pred hccccCCCCcEEEEEeecc--CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCc
Q 003661 562 LCVLKDRNKPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 639 (805)
Q Consensus 562 ~G~l~~~~k~vIl~vGRL~--~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~ 639 (805)
...++++|+++||+. +.||++.+++++.++. ++++|+|+|+|++ .++++++++++++.++
T Consensus 176 ----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~~ 237 (359)
T PRK09922 176 ----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSD-----------FEKCKAYSRELGIEQR 237 (359)
T ss_pred ----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCcc-----------HHHHHHHHHHcCCCCe
Confidence 023568899999996 4699999999998874 3799999999965 4678889999999999
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHHHH
Q 003661 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPAEIIVNGKSGYHIDPYHGEQA 718 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~-~GG~~EiI~dg~~G~li~p~d~e~l 718 (805)
|.|+|++.+ +.+++..+++. +|++|+||.+|+||++++||||||+|||+|+ .||+.|+|.++.+|++++|+|++++
T Consensus 238 v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~l 314 (359)
T PRK09922 238 IIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEF 314 (359)
T ss_pred EEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHH
Confidence 999996543 24677888885 9999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 719 AEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 719 A~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
+++|.+++ +|++.+ +..+......+|+-+.+++++..+|.
T Consensus 315 a~~i~~l~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 315 VGKLNKVI----SGEVKY---QHDAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHH----hCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99997766 788754 23343444477888889998888875
No 48
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=8.7e-33 Score=312.99 Aligned_cols=373 Identities=13% Similarity=0.099 Sum_probs=241.2
Q ss_pred CcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCC-CceeeceeEEecCCCCCCC-------Cc
Q 003661 275 MVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQG-LDITPQILIITRLLPDAVG-------TT 346 (805)
Q Consensus 275 ~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~G-h~V~~~I~VvT~~~~~~~g-------~~ 346 (805)
+.|||+|++..+. |..+|..+.++ .++..|+++| |+|+ |+.+..+.... ..
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 4599999998876 78899999999 7777889999 7999 99876543211 00
Q ss_pred cccce--e-eecCccCeEEEEeccCcCCcccccccc--cccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH-
Q 003661 347 CGQRL--E-KVYGTKYSDILRVPFRTEKGVVRKWIS--RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIV- 419 (805)
Q Consensus 347 ~~~~~--e-~i~~~~~v~Ilrvp~~~~~~~l~~~is--r~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~-~lv- 419 (805)
+.... | .+....+-++.++|..+... .+...+ +..+++. .++.+.+.+ .+|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~-yp~r~~~~~r~~~~~-----~~i~~~l~~---~~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKF-YPGKFSTDKRSILPV-----GDISETIPD---EEADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEeccccccc-CcccccccccccCCh-----HHHHHHHHh---cCCCEEEEcCchhhhhHH
Confidence 00000 0 01111123455554332211 111000 0111211 123333332 4799999998875 554
Q ss_pred -HHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHH-hhcCCEEEecCHHHHhhccccccccccc
Q 003661 420 -ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA-MNHTDFIITSTFQEIAGSKDTVGQYESH 497 (805)
Q Consensus 420 -a~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a-~~~AD~IIt~S~~~~~~~~~~~gqy~~~ 497 (805)
|..+++++++ +|.+.|+-.. .|.. +++. .....+.... ...+. -.++|.+++.|....+ .
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~---~~~~-g~~~~~l~~~-~~~~~~r~~~d~vi~pS~~~~~-l---------- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVK---REKN-GRVKAFLLKY-INSWVVDIYCHKVIRLSAATQD-Y---------- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHH---Hhcc-chHHHHHHHH-HHHHHHHHhcCEEEccCHHHHH-H----------
Confidence 6666777765 8889998321 1100 0000 0000000000 01111 2358999999974432 0
Q ss_pred cccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEe
Q 003661 498 TAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMA 577 (805)
Q Consensus 498 ~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vG 577 (805)
.....+.++|||.+.|.|....... ..+ ..+.-.+.++|+|
T Consensus 195 ------------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~-~~~~~~~~~l~vG 235 (462)
T PLN02846 195 ------------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN-GEQAFTKGAYYIG 235 (462)
T ss_pred ------------------hhCEEecCceechhhcCCCcccHhh--------------------hcC-CCCCcceEEEEEe
Confidence 1122334589999988776432111 011 0011245799999
Q ss_pred eccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHH
Q 003661 578 RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYR 657 (805)
Q Consensus 578 RL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~ 657 (805)
||.+.||++.|+++++++.+..++++|+|+|+|++ .++++++++++++..++ |.| ..+.++
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G----~~~~~~--- 296 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPG----RDHADP--- 296 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECC----CCCHHH---
Confidence 99999999999999999988778999999999986 46788899999886555 777 333344
Q ss_pred HHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHH
Q 003661 658 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWD 737 (805)
Q Consensus 658 ~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~ 737 (805)
+++ ++|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|++++ |.+++++++..++. .++ .
T Consensus 297 ~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~---~ 366 (462)
T PLN02846 297 LFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP---A 366 (462)
T ss_pred HHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc---h
Confidence 444 58999999999999999999999999999999998 59999999999985 89999999987762 233 2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003661 738 KISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 738 ~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
.++.+++ +.|||+..+++++++|+.-
T Consensus 367 ~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 367 PLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred hHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 2333322 5999999999999999864
No 49
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=1.2e-32 Score=302.23 Aligned_cols=342 Identities=19% Similarity=0.245 Sum_probs=246.7
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||++++... ..||.+.++. .++++|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999997542 3489999999 66777799999999 7764321
Q ss_pred ccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc--CCcEEEE
Q 003661 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL--GVTQCTI 434 (805)
Q Consensus 357 ~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~l--gip~v~t 434 (805)
.. .+.+. ..+||+||+|......+......+. ++|+|++
T Consensus 42 ---------~~---------------------------~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------AL---------------------------ISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------hh---------------------------hhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 00 00111 2379999999876655444444445 9999999
Q ss_pred ecCCCcccC----CCChhhhh-h-----cccccc---cchhhh-H-hHHHhhcCCEEEecCHHHHhhccccccccccccc
Q 003661 435 AHALEKTKY----PDSDIYWK-N-----LDDKYH---FSCQFT-A-DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTA 499 (805)
Q Consensus 435 ~H~l~~~k~----~~s~~~~~-~-----~~~~y~---~~~~~~-~-e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~ 499 (805)
+|+...... ......|. . ....+. ...+.. . .......++.++++|....+.+.+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 998643211 00000000 0 000000 011110 0 1112246778888887655422211
Q ss_pred cccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeec
Q 003661 500 FTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARL 579 (805)
Q Consensus 500 f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL 579 (805)
..++ ..++.++|||+|.+.|.|...... ++.+++ +++++++++.|+.
T Consensus 154 ----------~~~~--~~~~~vi~ngi~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ----------SLFK--GIPIEVIPNGIDTTIFRPRDKREA-------------------RKRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ----------cccC--CCceEEeCCCCcccccCCCcHHHH-------------------HHHhCC--CCCCeEEEEEecC
Confidence 0122 568999999999998876544322 233555 5667777777777
Q ss_pred cC--CCCHHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCC-hHHH
Q 003661 580 DR--VKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVR-NGEL 655 (805)
Q Consensus 580 ~~--~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~-~~el 655 (805)
.. .||++.++++++.+.+. .+++.++++|++... . ..++.++|.|+| .++ .+++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~-----------~-------~~~~~~~v~~~g----~~~~~~~~ 258 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE-----------I-------PPDLPFPVHYLG----SLNDDESL 258 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh-----------h-------hccCCCceEecC----CcCCHHHH
Confidence 65 89999999999998765 578999999998641 0 014567899999 555 6788
Q ss_pred HHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHH
Q 003661 656 YRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSY 735 (805)
Q Consensus 656 ~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~ 735 (805)
..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ +|++.
T Consensus 259 ~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~~ 333 (365)
T cd03825 259 ALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPDE 333 (365)
T ss_pred HHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHHH
Confidence 889985 9999999999999999999999999999999999999999999999999999999999997766 79999
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 736 WDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 736 ~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
+.+|++++++.+.++|||+.++++|.++|+
T Consensus 334 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 334 REELGEAARELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999999999999999999999999999986
No 50
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=1.8e-32 Score=311.24 Aligned_cols=379 Identities=17% Similarity=0.206 Sum_probs=249.4
Q ss_pred EEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHC--CCceeeceeEEecCCCCCCCCcc--ccceeee
Q 003661 279 VVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQ--GLDITPQILIITRLLPDAVGTTC--GQRLEKV 354 (805)
Q Consensus 279 I~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~--Gh~V~~~I~VvT~~~~~~~g~~~--~~~~e~i 354 (805)
|+++.|+-. ..||.+..+.|-|++| .++ ||+|+ |+|........... ......+
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f~~ 60 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRFNI 60 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhcCe
Confidence 566655543 2369999999666665 555 88898 99987433210000 0001111
Q ss_pred cCccCeEEEEec-cCcCCcccccccccccchhh---HHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCC
Q 003661 355 YGTKYSDILRVP-FRTEKGVVRKWISRFEVWPY---LETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGV 429 (805)
Q Consensus 355 ~~~~~v~Ilrvp-~~~~~~~l~~~isr~~i~~~---l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~-~lva~llar~lgi 429 (805)
.-.+++.++++. .+ .|+++ ..|+. +-.+...+...+.+..+.+||||+.+...+ .+. ++....++
T Consensus 61 ~~~~~~~~~~~~~~~-------~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~--~~~~~~~~ 130 (419)
T cd03806 61 ELDRPRIVFFLLKYR-------KLVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYP--LVRLLGGC 130 (419)
T ss_pred ecCCCceEEEEecce-------eeecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHH--HHHHhcCC
Confidence 112344544442 21 12222 23333 223444444444433345799999886433 222 12222488
Q ss_pred cEEEEecCCCcccCCCCh--hhhh-------------hcccccc--c-chhhhHhHHHhhcCCEEEecCHHHHhhccccc
Q 003661 430 TQCTIAHALEKTKYPDSD--IYWK-------------NLDDKYH--F-SCQFTADLIAMNHTDFIITSTFQEIAGSKDTV 491 (805)
Q Consensus 430 p~v~t~H~l~~~k~~~s~--~~~~-------------~~~~~y~--~-~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~ 491 (805)
|++.-+|- +..-.+.. ...+ ......+ + ......+.++++.||.|+++|....+.+++..
T Consensus 131 ~~i~y~h~--P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~ 208 (419)
T cd03806 131 PVGAYVHY--PTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLW 208 (419)
T ss_pred eEEEEecC--CcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHh
Confidence 99999992 11000000 0000 0000000 0 00012467789999999999987766433321
Q ss_pred cccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCc
Q 003661 492 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKP 571 (805)
Q Consensus 492 gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~ 571 (805)
+ . ..++.||+||+|.+.|.+.... ...+++
T Consensus 209 ~--------------------~--~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~ 238 (419)
T cd03806 209 K--------------------R--NTKPSIVYPPCDVEELLKLPLD----------------------------EKTREN 238 (419)
T ss_pred C--------------------c--CCCcEEEcCCCCHHHhcccccc----------------------------cccCCc
Confidence 1 1 2478999999998776543210 034567
Q ss_pred EEEEEeeccCCCCHHHHHHHHHHhHccCC-----CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCC
Q 003661 572 ILFTMARLDRVKNLTGLVEWYGKNAKLRE-----LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 572 vIl~vGRL~~~Kgl~~LieA~~~l~~~~~-----~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~ 646 (805)
+|+|+||+.+.||++.+++|++++.+..+ +++|+|+|++... +...+.++++++++++++.++|.|+|
T Consensus 239 ~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g-- 311 (419)
T cd03806 239 QILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVV-- 311 (419)
T ss_pred EEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEec--
Confidence 99999999999999999999999987655 4999999998642 11235678899999999999999999
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCceEEEECCCCHHHHHHHH
Q 003661 647 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIV---NGKSGYHIDPYHGEQAAEIL 722 (805)
Q Consensus 647 ~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~-~EiI~---dg~~G~li~p~d~e~lA~aI 722 (805)
.++.+++..+|+. +|++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |++++|++|
T Consensus 312 --~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai 386 (419)
T cd03806 312 --NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAI 386 (419)
T ss_pred --CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHH
Confidence 7888999999995 99999999999999999999999999999999886 57887 899999985 899999999
Q ss_pred HHHHHHhhCCH-HHHHHHHHHHHHHHHHhCCHHHHHH
Q 003661 723 VDFFEKCKADP-SYWDKISLGGLKRIEEKYTWKIYSQ 758 (805)
Q Consensus 723 ~~~l~~l~~dp-~~~~~ms~~ar~~v~~~ysw~~~a~ 758 (805)
.+++ +++ +.++.+ .++++.+.++|||+.+.+
T Consensus 387 ~~ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 387 EKIL----SLSEEERLRI-RRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHHH----hCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence 8776 554 455555 555555779999998754
No 51
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=4.4e-32 Score=291.05 Aligned_cols=345 Identities=17% Similarity=0.223 Sum_probs=249.9
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++++.. + .||.+.++. +|+++|+++||+|+ +++....+.. .. ...
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~------~~---~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEPP------FY---ELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCCC------cc---ccC
Confidence 6888886654 2 689999999 67777889999999 8886543300 00 111
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcC-CcEEEEec
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLG-VTQCTIAH 436 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lg-ip~v~t~H 436 (805)
.++.+..++...... +. ..+.. .... ..+++ ..+||+||++.+.. ...+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----~~---~~~~~----~~~~-~~~l~--~~~~d~i~~~~~~~--~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----LL---ARFKK----LRRL-RKLLK--NNKPDVVISFLTSL--LTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----hh---ccccc----hHHH-HHhhc--ccCCCEEEEcCchH--HHHHHHHhhccccEEEecC
Confidence 234555544432110 00 00000 1111 12222 25899999998762 2222233344 49999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~ 516 (805)
+...... ....+ ...+...++.+|.+++.|...... . .+ ...
T Consensus 114 ~~~~~~~--~~~~~------------~~~~~~~~~~~d~ii~~s~~~~~~---~-------------------~~--~~~ 155 (348)
T cd03820 114 NSPDAYK--KRLRR------------LLLRRLLYRRADAVVVLTEEDRAL---Y-------------------YK--KFN 155 (348)
T ss_pred CCccchh--hhhHH------------HHHHHHHHhcCCEEEEeCHHHHHH---h-------------------hc--cCC
Confidence 7532210 00000 012456789999999999876410 0 01 115
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999998655432 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003661 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fG 676 (805)
+..++++|+|+|++.+ ...+.++++++++.++|.+.|. .+++..+++. +|+++.||.+|+||
T Consensus 205 ~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~~ 266 (348)
T cd03820 205 KKHPDWKLRIVGDGPE-----------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGFP 266 (348)
T ss_pred hcCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCccccccC
Confidence 8889999999999865 3566778889999999999993 4688899995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003661 677 LTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 677 ltvlEAMA~GlPVVat~~G-G~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 755 (805)
++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ +||+.+++|++++++.+ ++|+|+.
T Consensus 267 ~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~ 341 (348)
T cd03820 267 MVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIEN 341 (348)
T ss_pred HHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHHH
Confidence 9999999999999999865 5677888888999999999999999997765 89999999999996655 8999999
Q ss_pred HHHHHH
Q 003661 756 YSQRLL 761 (805)
Q Consensus 756 ~a~~ll 761 (805)
++++|.
T Consensus 342 ~~~~~~ 347 (348)
T cd03820 342 IIKQWE 347 (348)
T ss_pred HHHHhc
Confidence 998875
No 52
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.1e-32 Score=311.71 Aligned_cols=395 Identities=18% Similarity=0.228 Sum_probs=258.8
Q ss_pred ccCCCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccc
Q 003661 271 GRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQR 350 (805)
Q Consensus 271 ~~~~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~ 350 (805)
++....++|+++.|+-. ..||.+..+.+-|++ |+++|++++ |+|.|... |... .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~--------l~~~~~~~~--v~iyt~~~-d~~~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRA--------IQEENPDLD--CVIYTGDH-DASP---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHH--------HHhhCCCCe--EEEEcCCC-CCCH---HHH
Confidence 44455678988866543 336999999966655 477898544 33788652 2211 111
Q ss_pred eeeecCccCeEE------EEeccCcCCcccccccccccchhhHH---HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHH
Q 003661 351 LEKVYGTKYSDI------LRVPFRTEKGVVRKWISRFEVWPYLE---TYTEDVAVEIAKELQGKPDLIIGNYSDGNIVAS 421 (805)
Q Consensus 351 ~e~i~~~~~v~I------lrvp~~~~~~~l~~~isr~~i~~~l~---~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~ 421 (805)
+......-++.+ +++. .++|+.+ ..|+++. .....+...+.......||+++-....+ ...
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-------~~~~~~~-~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~ 153 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-------KRKWIEE-ETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTY 153 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-------ccccccc-ccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHH
Confidence 111111112221 2221 1245543 4565522 2222222222222223566555332211 112
Q ss_pred HHHHHcCCcEEEEecCCCccc------------CCC----Chhhhhh-cccccccchhhhHhHHHhhcCCEEEecCHHHH
Q 003661 422 LLAHKLGVTQCTIAHALEKTK------------YPD----SDIYWKN-LDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 422 llar~lgip~v~t~H~l~~~k------------~~~----s~~~~~~-~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
.+++..++|+++.+|-..... |.. ....|.. ....|+.... ..+..+.+.||.|+++|....
T Consensus 154 pl~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~ 232 (463)
T PLN02949 154 PLARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTK 232 (463)
T ss_pred HHHHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHH
Confidence 234456899999999432110 000 0000000 0001110000 134566789999999998876
Q ss_pred hhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhcc
Q 003661 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCV 564 (805)
Q Consensus 485 ~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~ 564 (805)
+.+++.. +. +.++.+++||+|.+.+.+....
T Consensus 233 ~~l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~--------------------------- 263 (463)
T PLN02949 233 SHIEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE--------------------------- 263 (463)
T ss_pred HHHHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc---------------------------
Confidence 6433321 11 3478899999997655221100
Q ss_pred ccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc----cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE
Q 003661 565 LKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK----LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 565 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V 640 (805)
.+.+++.++++||+.+.||++.+++|++++.+ ..++++|+|+|+++.. +...+.++++++++++++.++|
T Consensus 264 -~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~-----~~~~~~~eL~~la~~l~L~~~V 337 (463)
T PLN02949 264 -RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNK-----EDEERLQKLKDRAKELGLDGDV 337 (463)
T ss_pred -ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCc-----ccHHHHHHHHHHHHHcCCCCcE
Confidence 02356789999999999999999999998764 2478999999998541 1123457889999999999999
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCHH
Q 003661 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPA-EIIVN---GKSGYHIDPYHGE 716 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~-EiI~d---g~~G~li~p~d~e 716 (805)
.|+| .++.+++..+++. ++++|.||.+|+||++++||||||+|||+++.||+. |+|.+ |.+|++++ |++
T Consensus 338 ~f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~ 410 (463)
T PLN02949 338 EFHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVE 410 (463)
T ss_pred EEeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHH
Confidence 9999 6778999999995 999999999999999999999999999999999985 77765 67899985 899
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
++|++|.++++ .+++.+++|+++|++++ ++|||+.+++++.+.++.
T Consensus 411 ~la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 411 EYADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 99999977762 36888999999999998 779999999999998763
No 53
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=7.9e-32 Score=290.41 Aligned_cols=356 Identities=18% Similarity=0.275 Sum_probs=257.7
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++. .||.+.++. +|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57777755 278888888 77777889999999 8886532221 0112
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-HcCCcEEEEec
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar-~lgip~v~t~H 436 (805)
.++.++.+|..... . ..+..+.. ...+. .+.+ +.+||+||++......++.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~---~~~~~~~~-~~~~~-~~~~--~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------I---NPFKDLKA-LLRLY-RLLR--KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------c---ChHhHHHH-HHHHH-HHHH--hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 35667777664310 1 11111111 11122 2222 35799999998777777777776 44567777788
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~ 516 (805)
+......... ..+ . .....++..++.+|.+++.|....+...+. .+.+ ..
T Consensus 113 ~~~~~~~~~~-~~~----~-----~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSGG-LKR----R-----LYLLLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhccch-hHH----H-----HHHHHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 7533221110 000 0 011234567889999999998876632221 0111 13
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.++.+++||+|...+.+.... .+.+++.|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 467788999998776543321 0456789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHH-HHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCC
Q 003661 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYS-LIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAF 675 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~-li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~f 675 (805)
+.+++++|+++|++.... .... ++...+..++|+|.|. .+++..+++. +|++++||..|+|
T Consensus 215 ~~~~~~~l~i~G~~~~~~-----------~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~~ 276 (359)
T cd03808 215 AKGPNVRLLLVGDGDEEN-----------PAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREGL 276 (359)
T ss_pred hcCCCeEEEEEcCCCcch-----------hhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccCc
Confidence 878899999999997621 1111 3667778889999994 3568888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003661 676 GLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 676 GltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 755 (805)
|++++|||+||+|||+|+.+|..|++.++.+|++++++|+++++++|.+++ .|++.+.++++++++.+.++|||+.
T Consensus 277 ~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~ 352 (359)
T cd03808 277 PRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEEI 352 (359)
T ss_pred chHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHH
Confidence 999999999999999999999999999999999999999999999997655 8999999999999999999999999
Q ss_pred HHHHHH
Q 003661 756 YSQRLL 761 (805)
Q Consensus 756 ~a~~ll 761 (805)
++++++
T Consensus 353 ~~~~~~ 358 (359)
T cd03808 353 VVKKLL 358 (359)
T ss_pred HHHHhh
Confidence 999876
No 54
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=1.9e-31 Score=288.36 Aligned_cols=284 Identities=28% Similarity=0.438 Sum_probs=232.0
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCH
Q 003661 403 QGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (805)
Q Consensus 403 ~~kPDIIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 481 (805)
..+||+||+|+... ...+..+++..++|++.+.|+.......... .........++.+|.+++.|.
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 45899999997654 5667777888899999999986443211110 111234467889999999998
Q ss_pred HHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003661 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 482 ~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 561 (805)
...+...+. ++ ...++.++|||+|...+.+...... ..
T Consensus 158 ~~~~~~~~~--------------------~~--~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~ 195 (377)
T cd03798 158 ALADELKAL--------------------GI--DPEKVTVIPNGVDTERFSPADRAEA--------------------RK 195 (377)
T ss_pred HHHHHHHHh--------------------cC--CCCceEEcCCCcCcccCCCcchHHH--------------------Hh
Confidence 876632221 11 2668999999999988876543221 01
Q ss_pred hccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEE
Q 003661 562 LCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFR 641 (805)
Q Consensus 562 ~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~ 641 (805)
.+. ..+++.++++|++.+.||++.+++++..+.+.+++++|+++|.+.. ...+.+.++.+++.++|.
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~~~~v~ 262 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL-----------REALEALAAELGLEDRVT 262 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----------hHHHHHHHHhcCCcceEE
Confidence 122 4577899999999999999999999999988788999999999864 356777888889999999
Q ss_pred EecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003661 642 WISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEI 721 (805)
Q Consensus 642 flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~a 721 (805)
+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|++++++|+++++++
T Consensus 263 ~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 337 (377)
T cd03798 263 FLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEA 337 (377)
T ss_pred EeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHH
Confidence 999 7778999999995 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 722 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 722 I~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
|.+++ .++.. +++.++++.+.+.|+|+..++++.++++
T Consensus 338 i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 338 ILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 97766 78776 7889999999999999999999999875
No 55
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.7e-32 Score=299.21 Aligned_cols=364 Identities=20% Similarity=0.237 Sum_probs=256.1
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++.......... . ...
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~-~----~~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLL-P----LRA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccc-c----chh--
Confidence 578887666521 5799999999 77777899999999 7776532221100 0 000
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
.... .... .....+.............+. ..+||+||++++..... +..++|+++++|+
T Consensus 54 -~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---cccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 0000 001111111111111111111 25899999998776433 6679999999998
Q ss_pred CCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCC
Q 003661 438 LEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP 517 (805)
Q Consensus 438 l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ 517 (805)
+.....+.....+ ............++.+|.+++.|....+.+.+.. +++ ..
T Consensus 113 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~-------------------~~~--~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG-------FRRYFRRLLRRALRRADAIITVSEATKRDLLRYL-------------------GVP--PD 164 (365)
T ss_pred chhhhCcccCCHH-------HHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh-------------------CcC--HH
Confidence 6543322111110 0001112345678999999999987766332221 111 55
Q ss_pred cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc
Q 003661 518 KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK 597 (805)
Q Consensus 518 ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~ 597 (805)
++.++|||+|...+.+..... + ..... ..++++|+++||+.+.||++.+++++..+.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-V-------------------LRALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-H-------------------HHHhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998776654322 1 11122 4678899999999999999999999999998
Q ss_pred cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcH
Q 003661 598 LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGL 677 (805)
Q Consensus 598 ~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGl 677 (805)
..++++|+++|++... .......+++.++.++|.++| .++.+++..+++. +|+++.||..|+||+
T Consensus 223 ~~~~~~l~i~G~~~~~----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~~ 287 (365)
T cd03809 223 KGPDPKLVIVGKRGWL----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFGL 287 (365)
T ss_pred hcCCCCEEEecCCccc----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCCC
Confidence 8778999999987652 112223336778889999999 6777899999995 999999999999999
Q ss_pred HHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003661 678 TVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 678 tvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a 757 (805)
+++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.+++ +|++.+.++++++++.+ ++|||+..+
T Consensus 288 ~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~~ 360 (365)
T cd03809 288 PVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKTA 360 (365)
T ss_pred CHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHHH
Confidence 9999999999999999999999984 4699999999999999997655 89999999999999665 889999999
Q ss_pred HHHH
Q 003661 758 QRLL 761 (805)
Q Consensus 758 ~~ll 761 (805)
++++
T Consensus 361 ~~~~ 364 (365)
T cd03809 361 RRTL 364 (365)
T ss_pred HHHh
Confidence 9886
No 56
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=9.9e-32 Score=291.63 Aligned_cols=354 Identities=15% Similarity=0.178 Sum_probs=246.3
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||++++++..+ ..+||.+.++. .|+++|+++||+|+ +++.......... . .
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~-~--------~ 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDK-E--------V 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccc-c--------c
Confidence 68899876642 24699999999 66777789999999 8876533221110 0 0
Q ss_pred cCeEEEEecc--CcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEE
Q 003661 358 KYSDILRVPF--RTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLGVTQCTI 434 (805)
Q Consensus 358 ~~v~Ilrvp~--~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~-~lva~llar~lgip~v~t 434 (805)
.+..+...+. ....... ........+...........+.+. .+||+||+|.... .......++..++|++++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~ 126 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALP---RDLFHLSDYDNPAVVAEFARLLED--FRPDVVHFHHLQGLGVSILRAARDRGIPIVLT 126 (359)
T ss_pred ccceeeccccccccCCCch---hhhhHHHhccCHHHHHHHHHHHHH--cCCCEEEECCccchHHHHHHHHHhcCCCEEEE
Confidence 1111211110 0000000 000000011111111222233332 4799999998754 334445567789999999
Q ss_pred ecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCC
Q 003661 435 AHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV 514 (805)
Q Consensus 435 ~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~ 514 (805)
+|+...... + ........|.++++|....+.+.+. +..
T Consensus 127 ~hd~~~~~~------~---------------~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~~- 164 (359)
T cd03823 127 LHDYWLICP------R---------------QGLFKKGGDAVIAPSRFLLDRYVAN--------------------GLF- 164 (359)
T ss_pred Eeeeeeecc------h---------------hhhhccCCCEEEEeCHHHHHHHHHc--------------------CCC-
Confidence 997532110 0 0011223399999998766532221 222
Q ss_pred CCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHH
Q 003661 515 FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGK 594 (805)
Q Consensus 515 ~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~ 594 (805)
..++.+|+||+|...+.+... +. +.++++|+++||+.+.||++.+++++++
T Consensus 165 -~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~~ 215 (359)
T cd03823 165 -AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFKR 215 (359)
T ss_pred -ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHHH
Confidence 458999999999977654321 01 4567889999999999999999999999
Q ss_pred hHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC-CC
Q 003661 595 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YE 673 (805)
Q Consensus 595 l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~-~E 673 (805)
+.+ ++++|+++|+++.. ....... +..++|.++| .++.+++..+++. +|++++||. .|
T Consensus 216 l~~--~~~~l~i~G~~~~~-----------~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~e 274 (359)
T cd03823 216 LPR--GDIELVIVGNGLEL-----------EEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWPE 274 (359)
T ss_pred HHh--cCcEEEEEcCchhh-----------hHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcccC
Confidence 876 78999999998651 1111111 5668999999 6778999999995 999999997 79
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCH
Q 003661 674 AFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW 753 (805)
Q Consensus 674 ~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw 753 (805)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.++++++++++....
T Consensus 275 ~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~---- 346 (359)
T cd03823 275 NFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRSI---- 346 (359)
T ss_pred CCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhhH----
Confidence 99999999999999999999999999999999999999999999999997766 7999999999999887633
Q ss_pred HHHHHHHHHHHH
Q 003661 754 KIYSQRLLTLTG 765 (805)
Q Consensus 754 ~~~a~~ll~Ly~ 765 (805)
+.++++++++|+
T Consensus 347 ~~~~~~~~~~~~ 358 (359)
T cd03823 347 EDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 57
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=4.6e-32 Score=306.35 Aligned_cols=278 Identities=15% Similarity=0.097 Sum_probs=193.2
Q ss_pred CCCceEEEEcCCCc---hHH--HH----HHHHHcCCcEEEEecCCCccc----CCCChhhhhhcc---cc---c-----c
Q 003661 403 QGKPDLIIGNYSDG---NIV--AS----LLAHKLGVTQCTIAHALEKTK----YPDSDIYWKNLD---DK---Y-----H 458 (805)
Q Consensus 403 ~~kPDIIh~h~~~~---~lv--a~----llar~lgip~v~t~H~l~~~k----~~~s~~~~~~~~---~~---y-----~ 458 (805)
..+|||||.|...+ ++. .. +..+..++|+|.|.|+.+... |...-..|+.-+ +. | .
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 45799999998765 332 11 112356799999999976332 111111222111 00 1 1
Q ss_pred cc-----hhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCC
Q 003661 459 FS-----CQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFP 533 (805)
Q Consensus 459 ~~-----~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p 533 (805)
.+ .....-....+.++.+|++|...++..... .+ ..++.|||||+|+..+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~---------------------~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL---------------------YG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH---------------------cC--CCCEEEeCCCcCcccccc
Confidence 01 110011122345789999998766632211 11 458999999999754332
Q ss_pred CcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeec--cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCC
Q 003661 534 YTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARL--DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDR 611 (805)
Q Consensus 534 ~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL--~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~ 611 (805)
....... . .++++++|+++|+. .+.||++.|++|+.++. ++++|+++|+++
T Consensus 229 ~~~~~~~----------------------~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPPV----------------------R--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred ccccccc----------------------c--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 2111100 0 03567889999994 47899999999998763 579999999985
Q ss_pred CCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEE
Q 003661 612 RKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA 691 (805)
Q Consensus 612 ~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVa 691 (805)
.. ...+|.++|.+. +..++..+|+. +|+||+||.+|+||++++||||||+|||+
T Consensus 282 ~~----------------------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVVa 335 (405)
T PRK10125 282 PF----------------------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVIA 335 (405)
T ss_pred cc----------------------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEEE
Confidence 31 024688998544 35688888885 99999999999999999999999999999
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 692 TCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDK----ISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 692 t~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~----ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
|+.||++|++.++ +|++++|+|++++|+.+ ++...++ +.+++++++.++|||+.++++|+++|+.
T Consensus 336 t~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 336 THSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred eCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999775 99999999999999754 4444443 3466899998999999999999999963
No 58
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=2.1e-32 Score=308.01 Aligned_cols=283 Identities=16% Similarity=0.161 Sum_probs=204.9
Q ss_pred CCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCCcccCCCCh--hhhhhcccccccc--hhhhHhHHHhhcCCEEEe
Q 003661 404 GKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYPDSD--IYWKNLDDKYHFS--CQFTADLIAMNHTDFIIT 478 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~lla-r~lgip~v~t~H~l~~~k~~~s~--~~~~~~~~~y~~~--~~~~~e~~a~~~AD~IIt 478 (805)
.++|+||+++...+ ..+. +..++|.|++.|+.+...+.... ..+. ....|+.. .....|+..++.+|.|++
T Consensus 103 ~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 103 EPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWP-LRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred CCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 57999999875432 2222 34689999999986432211000 0000 00011100 011246778899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhh
Q 003661 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 479 ~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 558 (805)
+|+.+.+.+++.. +.. ..++.+||||+|.+.|.|......
T Consensus 179 ~S~~~~~~l~~~~-------------------~~~--~~~v~vipngvd~~~f~~~~~~~~------------------- 218 (397)
T TIGR03087 179 VSRAEAELFRRLA-------------------PEA--AGRITAFPNGVDADFFSPDRDYPN------------------- 218 (397)
T ss_pred cCHHHHHHHHHhC-------------------CCC--CCCeEEeecccchhhcCCCccccC-------------------
Confidence 9998876432220 111 458999999999988866432110
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHH----HHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHc
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLV----EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY 634 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~Li----eA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l 634 (805)
.+ .+++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. ++ ++++
T Consensus 219 ----~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~------------~~----~~~l 276 (397)
T TIGR03087 219 ----PY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS------------PA----VRAL 276 (397)
T ss_pred ----CC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh------------HH----HHHh
Confidence 11 34568999999999999999988 56666777779999999999964 12 2333
Q ss_pred CCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC
Q 003661 635 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY 713 (805)
Q Consensus 635 ~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~-~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~ 713 (805)
+..++|+|+|. ++ ++..+++. +|++|+||. .||+|++++||||||+|||+|+.|+. .+...+.+|++++ +
T Consensus 277 ~~~~~V~~~G~----v~--~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~ 347 (397)
T TIGR03087 277 AALPGVTVTGS----VA--DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-A 347 (397)
T ss_pred ccCCCeEEeee----cC--CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-C
Confidence 44578999994 43 57888885 999999997 69999999999999999999987643 3444456799986 8
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 714 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
|+++++++|.+++ +|++.+++|+++|++++.++|||+..++++.+++.
T Consensus 348 ~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 348 DPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred CHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 9999999997665 89999999999999999999999999999999875
No 59
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=5.2e-31 Score=282.85 Aligned_cols=351 Identities=18% Similarity=0.249 Sum_probs=247.9
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCc
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGT 357 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~ 357 (805)
||+++++... .||...++. +|+++|.++||+|. +++............ ...
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLP------SNV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCccccccc------cch
Confidence 5788876542 489999999 77777899999999 887654322111000 000
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEec
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYS-DGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~-~~~lva~llar~lgip~v~t~H 436 (805)
........... ....+. +... ...+.+. .+||+||++.. ...+++.+.++. ++|.+.+.|
T Consensus 52 ~~~~~~~~~~~-----------~~~~~~----~~~~-~~~~~~~--~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLK-----------SLRDLL----AILR-LRRLLRK--EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeecc-----------cccchh----HHHH-HHHHHHh--cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 00000000000 001111 1111 2222222 37999999988 444555544444 899999999
Q ss_pred CCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCC
Q 003661 437 ALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFD 516 (805)
Q Consensus 437 ~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~ 516 (805)
+............+ ......++.+|.+++.|....+.+.+.. +.. .
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~~-------------------~~~--~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKLL-------------------GIP--P 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHhh-------------------cCC--c
Confidence 86443211110000 2245678899999999987665322221 111 4
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.++.+||||+|...+.+...... ..+. +.++++++++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999887765443211 0122 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCc
Q 003661 597 KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFG 676 (805)
Q Consensus 597 ~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fG 676 (805)
+..++++|+++|+++. .+++.+.++++++.++|.|.|.. +++..+++. +|++++||.+|++|
T Consensus 216 ~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~~ 277 (353)
T cd03811 216 KEGPDARLVILGDGPL-----------REELEALAKELGLADRVHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGFP 277 (353)
T ss_pred hcCCCceEEEEcCCcc-----------HHHHHHHHHhcCCCccEEEeccc------CCHHHHHHh-CCEEEeCcccCCCC
Confidence 8888999999999864 35666888999999999999942 357778885 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCC
Q 003661 677 LTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYT 752 (805)
Q Consensus 677 ltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ys 752 (805)
++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+..+ ..+..+++.++++++++++.+.++|+
T Consensus 278 ~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 278 NVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred cHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999996444433 56779999999999999999888886
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=1.7e-31 Score=308.31 Aligned_cols=279 Identities=22% Similarity=0.251 Sum_probs=211.0
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCC--hhhhhhcccccccchhhhHhHHHhhcCCEEEecC
Q 003661 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS--DIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 403 ~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s--~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 480 (805)
..++||+|++.+.....+ ++.....+|.+.++|+-+....... ...|.. .|.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~---~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWNN---YYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHH---HHHH------HHhchhhCCEEEECC
Confidence 357999999776653333 4455668999999998543221111 111221 1111 123467889999999
Q ss_pred HHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003661 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 481 ~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 560 (805)
+...+.+.+..++|. .. .+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~~----------------~~--~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKYY----------------NI--EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhhc----------------CC--CCcEEEEcCCCcccccCccc-------------------------
Confidence 876664433332221 11 56899999998754433210
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE
Q 003661 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF 640 (805)
Q Consensus 561 ~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V 640 (805)
...+..|+++||+.+.||++.|++|++++.+..|+++|+|+|+|+. .+.++++++++++.++|
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~l~~~V 378 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE-----------KQKLQKIINENQAQDYI 378 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh-----------HHHHHHHHHHcCCCCeE
Confidence 2344679999999999999999999999998889999999999953 46788999999999999
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECC----CC-
Q 003661 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGKSGYHIDP----YH- 714 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~G-G~~EiI~dg~~G~li~p----~d- 714 (805)
.|+| ..+ +..+++ .+|++|+||..|+||++++||||||+|||+|+.+ |++|+|++|.+|+++++ +|
T Consensus 379 ~f~G----~~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~ 450 (500)
T TIGR02918 379 HLKG----HRN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDE 450 (500)
T ss_pred EEcC----CCC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccch
Confidence 9999 433 445555 5999999999999999999999999999999986 89999999999999974 33
Q ss_pred ---HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 715 ---GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 715 ---~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
++++|++|.+++ + ++.+++|+++|++.+ ++|||+.++++|.++++
T Consensus 451 ~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 451 DQIITALAEKIVEYF----N-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVR 498 (500)
T ss_pred hHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHh
Confidence 777888886554 4 556999999999976 88999999999999875
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.98 E-value=1.2e-30 Score=295.17 Aligned_cols=276 Identities=16% Similarity=0.214 Sum_probs=219.2
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCc-EEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecC
Q 003661 403 QGKPDLIIGNYSDG-NIVASLLAHKLGVT-QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 403 ~~kPDIIh~h~~~~-~lva~llar~lgip-~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 480 (805)
..++|++|+++... +..+.+++++.+.+ +|.++|+..... ......+. ......++.+|.|+++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 36789999866544 45556677777776 899999853211 01111111 11234578999999999
Q ss_pred HHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003661 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 481 ~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 560 (805)
....+.+++.. +. ...++.+++||+|...+.+...
T Consensus 192 ~~~~~~l~~~~-------------------~~--~~~ki~vi~~gv~~~~~~~~~~------------------------ 226 (407)
T cd04946 192 EQGRNYLQKRY-------------------PA--YKEKIKVSYLGVSDPGIISKPS------------------------ 226 (407)
T ss_pred HHHHHHHHHHC-------------------CC--ccccEEEEECCcccccccCCCC------------------------
Confidence 98776433321 11 2568899999999876543210
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC--CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC
Q 003661 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE--LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 638 (805)
Q Consensus 561 ~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~ 638 (805)
..+++.|+++||+.+.||++.+++|+.++.+.+| ++.++++|+|+. .+.+++++++.+..+
T Consensus 227 ------~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~~~~ 289 (407)
T cd04946 227 ------KDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKPENI 289 (407)
T ss_pred ------CCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcCCCc
Confidence 3457889999999999999999999999988776 467788999854 456778888888888
Q ss_pred cEEEecCCCCcCChHHHHHHHHc-cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC-CHH
Q 003661 639 QFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPY-HGE 716 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~la~-aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~-d~e 716 (805)
+|.|+| .++.+++..+++. .+|+||.||..||||++++||||||+|||+|+.||..|+|.++++|+++++. |++
T Consensus 290 ~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~ 365 (407)
T cd04946 290 SVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTPN 365 (407)
T ss_pred eEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHH
Confidence 999999 7777899999974 3789999999999999999999999999999999999999999999999874 899
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003661 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll 761 (805)
+++++|.+++ +||+.+++|+++|++.+.++|||+...+++.
T Consensus 366 ~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 366 ELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999997766 7999999999999999999999999988875
No 62
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2e-29 Score=285.93 Aligned_cols=438 Identities=17% Similarity=0.182 Sum_probs=294.3
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeec-
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY- 355 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~- 355 (805)
|||+.+|.-..| --++||+...+- .|.++|++.|++|+ |+...++... ..+....+.+.
T Consensus 1 M~Il~v~~E~~p-------~vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~~~-~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFP-------FVKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPKVQ-KEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecC-------ccccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchhhh-hhhccccceeeE
Confidence 788888876663 257999999998 66777899999999 8888776322 22222111111
Q ss_pred ------CccCeEEEEecc--CcCCcc-cc--cccccc--cchhh---HHHHH--HHHHHHHHHHcC--CCceEEEEcCCC
Q 003661 356 ------GTKYSDILRVPF--RTEKGV-VR--KWISRF--EVWPY---LETYT--EDVAVEIAKELQ--GKPDLIIGNYSD 415 (805)
Q Consensus 356 ------~~~~v~Ilrvp~--~~~~~~-l~--~~isr~--~i~~~---l~~f~--~~~~~~i~~~~~--~kPDIIh~h~~~ 415 (805)
+.....+..... .+-+-+ +. ..-.|. ..+.+ .++|+ ..+.-++..... ..|||||+|+|.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWq 140 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQ 140 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHH
Confidence 101111111111 000000 11 001110 11111 12222 222223332322 379999999999
Q ss_pred chHHHHHHHHH----cCCcEEEEecCCCcccCCC-Chhhhhhccc-ccc-----cchhhhHhHHHhhcCCEEEecCHHHH
Q 003661 416 GNIVASLLAHK----LGVTQCTIAHALEKTKYPD-SDIYWKNLDD-KYH-----FSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 416 ~~lva~llar~----lgip~v~t~H~l~~~k~~~-s~~~~~~~~~-~y~-----~~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
.+++..+++.. ..+|.|+|+|++....... .-..+-.+.. .|. +..+..-.+-.+..||.|.|+|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 99999999884 4799999999975544222 1111111110 111 11222334567889999999999887
Q ss_pred hhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhcc
Q 003661 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCV 564 (805)
Q Consensus 485 ~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~ 564 (805)
..+... .|. ..+.++. .....++.-|-||+|.+.+.|.++......--.........|+...++++|+
T Consensus 221 ~Ei~t~--~~g----~gl~g~l------~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 221 GEIYTP--EYG----EGLEGLL------SWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred Hhhccc--ccc----ccchhhh------hhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 754411 111 1111111 1113578899999999999998765332111112233466688888999999
Q ss_pred ccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003661 565 LKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 565 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG 644 (805)
..+.+.|++.++||+..+||++.+++++..+.+.. +++++.|.|.. .....+..+++.+.. ++...-
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~---------~le~~~~~la~~~~~--~~~~~i 355 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP---------ELEEALRALASRHPG--RVLVVI 355 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH---------HHHHHHHHHHHhcCc--eEEEEe
Confidence 76778899999999999999999999999998864 99999999932 455677888887754 444443
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CceEEEECCCCHH
Q 003661 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN--------GKSGYHIDPYHGE 716 (805)
Q Consensus 645 ~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~d--------g~~G~li~p~d~e 716 (805)
.. +..+.+.+...+|++++||++|+||++-++||..|+++|++.+||.+|.|.+ ..+||++.+.|++
T Consensus 356 ----~~-~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~ 430 (487)
T COG0297 356 ----GY-DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPD 430 (487)
T ss_pred ----ee-cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHH
Confidence 22 3455555555799999999999999999999999999999999999999986 4799999999999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003661 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
+++.+|.+.+.--..++..|+.+..++.. .+|+|+..+++|.++|+..
T Consensus 431 ~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 431 HLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 99999999886555556669999999887 6899999999999999853
No 63
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=2.1e-29 Score=279.84 Aligned_cols=287 Identities=22% Similarity=0.269 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCC-hhhhhhcccccccchhhhHh
Q 003661 388 ETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDS-DIYWKNLDDKYHFSCQFTAD 466 (805)
Q Consensus 388 ~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s-~~~~~~~~~~y~~~~~~~~e 466 (805)
..+....+..+.. ..++|+||++....... .++......+.+.++|+.+....... ...|+. .+. ..
T Consensus 84 ~~l~~~~l~~l~~--~~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~---~~~------~~ 151 (372)
T cd04949 84 EELFAFFLDELNK--DTKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINN---FYE------YV 151 (372)
T ss_pred HHHHHHHHHHHhc--CCCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccch---hhH------HH
Confidence 3444444444432 25899999987765333 23444455678899997543221111 011111 111 11
Q ss_pred HHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCch
Q 003661 467 LIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHP 546 (805)
Q Consensus 467 ~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~ 546 (805)
...++.+|.||++|....+.+.+..+ . ..++.+||||+|...+.+....
T Consensus 152 ~~~~~~~d~ii~~s~~~~~~l~~~~~-------------------~---~~~v~~ip~g~~~~~~~~~~~~--------- 200 (372)
T cd04949 152 FENLDKVDGVIVATEQQKQDLQKQFG-------------------N---YNPIYTIPVGSIDPLKLPAQFK--------- 200 (372)
T ss_pred HhChhhCCEEEEccHHHHHHHHHHhC-------------------C---CCceEEEcccccChhhcccchh---------
Confidence 22467899999999887764333211 0 2348899999998776553200
Q ss_pred hhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHH
Q 003661 547 EIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKK 626 (805)
Q Consensus 547 ~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~ 626 (805)
...+..++++||+.+.||++.+++++.++.+..|+++|+|+|.|+. ...
T Consensus 201 --------------------~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~-----------~~~ 249 (372)
T cd04949 201 --------------------QRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE-----------EEK 249 (372)
T ss_pred --------------------hcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch-----------HHH
Confidence 3456789999999999999999999999998899999999999964 345
Q ss_pred HHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCc
Q 003661 627 MYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG-GPAEIIVNGK 705 (805)
Q Consensus 627 l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~G-G~~EiI~dg~ 705 (805)
+..+++++++.++|.|.|.. .++.++++. +|++|.||..|+||++++|||+||+|||+++.+ |+.++|.++.
T Consensus 250 ~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~ 322 (372)
T cd04949 250 LKELIEELGLEDYVFLKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGE 322 (372)
T ss_pred HHHHHHHcCCcceEEEcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCC
Confidence 67777889999999999942 357788885 999999999999999999999999999999987 8999999999
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003661 706 SGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRL 760 (805)
Q Consensus 706 ~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~l 760 (805)
+|++++++|+++++++|..++ .|++.+++|+++|++.+ ++|||+.++++|
T Consensus 323 ~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 323 NGYLVPKGDIEALAEAIIELL----NDPKLLQKFSEAAYENA-ERYSEENVWEKW 372 (372)
T ss_pred CceEeCCCcHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHHHhcC
Confidence 999999999999999997766 89999999999999995 899999998874
No 64
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=5e-29 Score=278.58 Aligned_cols=318 Identities=12% Similarity=0.065 Sum_probs=212.0
Q ss_pred HHHHHHHHCCC-ceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccccccccchh---hHHH--
Q 003661 316 EMLLRIKQQGL-DITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWP---YLET-- 389 (805)
Q Consensus 316 eLa~~L~~~Gh-~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~---~l~~-- 389 (805)
+++.+|+++|+ +|+ |++...+ +. ........+++|+++|. +... .. . ..++. |+..
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~---~~-----~~~~~~~~~v~v~r~~~-~~~~--~~-~--~~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGS---EP-----IPALLNHPSIHIHLMVQ-PRLL--QR-L--PRVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCC---CC-----CHHHhcCCcEEEEECCC-cccc--cc-c--ccchHHHHHHHHHH
Confidence 45666788886 799 8874321 11 11112234689999976 2210 00 1 11222 2221
Q ss_pred -HHHHHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhH
Q 003661 390 -YTEDVAVEIAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTA 465 (805)
Q Consensus 390 -f~~~~~~~i~~~~~~kPDIIh~h~~~~---~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~ 465 (805)
+.......+.. ...+||+||+|.+.. .+++.++++..++|++++.|+++....... .........+.. ..
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~---~~~~~~~~~~~~--~~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALS---LGRSHPLVRLYR--WY 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcc---cCCCCHHHHHHH--HH
Confidence 11111111111 245899999987543 456667788889999999998632110000 000000111111 23
Q ss_pred hHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCc
Q 003661 466 DLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFH 545 (805)
Q Consensus 466 e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~ 545 (805)
++..++.+|.||++|+...+.+.+. .|+ ++.+|+||+ .+.|.|......
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~------ 207 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR------ 207 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc------
Confidence 6778899999999998876632211 122 278999985 455655432110
Q ss_pred hhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH-----------------ccCCCeEEEEEe
Q 003661 546 PEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA-----------------KLRELVNLVVVG 608 (805)
Q Consensus 546 ~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~-----------------~~~~~v~LvIVG 608 (805)
+ .++.+.+++++||+.+.||++.+++|+..+. +.+|+++|+|+|
T Consensus 208 ------------------~-~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG 268 (371)
T PLN02275 208 ------------------L-RPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITG 268 (371)
T ss_pred ------------------c-cCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEe
Confidence 0 0223457889999999999999999998874 235789999999
Q ss_pred CCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCC---CCCCCcHHHHHHHHc
Q 003661 609 GDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPA---LYEAFGLTVVEAMTC 685 (805)
Q Consensus 609 ~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS---~~E~fGltvlEAMA~ 685 (805)
+|+. .++++++++++++.+ |.|.+. .++.+++..+|+. +|++|.|+ ..|+||++++|||||
T Consensus 269 ~G~~-----------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~ 332 (371)
T PLN02275 269 KGPQ-----------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGC 332 (371)
T ss_pred CCCC-----------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHC
Confidence 9975 468889999999976 888651 4677899999995 99999863 248999999999999
Q ss_pred CCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHH
Q 003661 686 GLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 725 (805)
Q Consensus 686 GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~ 725 (805)
|+|||+|+.||.+|+|+++.+|++++ |++++|++|.++
T Consensus 333 G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 333 GLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 99999999999999999999999996 699999999654
No 65
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=3.3e-29 Score=276.28 Aligned_cols=263 Identities=20% Similarity=0.266 Sum_probs=190.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhh------hhhcccccccchhhhHhHHHhhcCCEEE
Q 003661 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIY------WKNLDDKYHFSCQFTADLIAMNHTDFII 477 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~------~~~~~~~y~~~~~~~~e~~a~~~AD~II 477 (805)
.++|+||++.... +..+.+..++|.+..+|+.....+...+.+ +......+........+..+++++|.|+
T Consensus 82 ~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 158 (351)
T cd03804 82 SGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFI 158 (351)
T ss_pred cCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 5899999875422 222224567888888886321111100000 0000000001111123456789999999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhh
Q 003661 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (805)
Q Consensus 478 t~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 557 (805)
++|+...+.+.+. +..+..+|+||+|.+.|.+..
T Consensus 159 ~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~---------------------- 192 (351)
T cd03804 159 ANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE---------------------- 192 (351)
T ss_pred ECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC----------------------
Confidence 9999877643221 133567899999987665421
Q ss_pred hhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC
Q 003661 558 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN 637 (805)
Q Consensus 558 ~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~ 637 (805)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+++++ +..
T Consensus 193 ----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~-----------~~~l~~-----~~~ 241 (351)
T cd03804 193 ----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE-----------LDRLRA-----KAG 241 (351)
T ss_pred ----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh-----------HHHHHh-----hcC
Confidence 23457999999999999999999998763 78999999954 123332 456
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~ 717 (805)
++|+|+| .++.+++..+++. +|++++||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+++
T Consensus 242 ~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~ 315 (351)
T cd03804 242 PNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTVES 315 (351)
T ss_pred CCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCHHH
Confidence 8999999 7788999999995 999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003661 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRL 760 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~l 760 (805)
++++|..++ +|++ .+.+++++++ ++|+|+.+.+++
T Consensus 316 la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 316 LAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 999997665 6774 2344555555 579999998875
No 66
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=6.1e-28 Score=277.00 Aligned_cols=271 Identities=11% Similarity=0.097 Sum_probs=195.1
Q ss_pred CCceEEEEcCCCc-hHH--HHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcc--cccccchhhhHhHHHh-hcCCEEE
Q 003661 404 GKPDLIIGNYSDG-NIV--ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLD--DKYHFSCQFTADLIAM-NHTDFII 477 (805)
Q Consensus 404 ~kPDIIh~h~~~~-~lv--a~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~--~~y~~~~~~~~e~~a~-~~AD~II 477 (805)
.+|||||.+.+.. ++. |..+|++++ |+|.++|+.... | ..... ....+..+. ...+.. .++|.|+
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Y------l~~y~~g~L~~~llk~-l~~~v~r~hcD~VI 503 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-Y------IKREKNGALQAFFVKH-INNWVTRAYCHKVL 503 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-H------HhHhcchhHHHHHHHH-HHHHHHHhhCCEEE
Confidence 4799999998875 666 888999999 999999985332 1 11000 000000000 011111 1389999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhh
Q 003661 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (805)
Q Consensus 478 t~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 557 (805)
++|..... . . ...+..| ||||++.|.|......+
T Consensus 504 aPS~atq~-L-------------------------~--~~vI~nV-nGVDte~F~P~~r~~~~----------------- 537 (794)
T PLN02501 504 RLSAATQD-L-------------------------P--KSVICNV-HGVNPKFLKIGEKVAEE----------------- 537 (794)
T ss_pred cCCHHHHH-h-------------------------c--ccceeec-ccccccccCCcchhHHH-----------------
Confidence 99965442 0 0 1112222 69999999887653321
Q ss_pred hhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC
Q 003661 558 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN 637 (805)
Q Consensus 558 ~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~ 637 (805)
+.+|. +...+.++|+|||.+.||++.|++|++.+.+..++++|+|+|+|+. .+++++++.++++
T Consensus 538 --r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~-----------reeLe~la~eLgL- 601 (794)
T PLN02501 538 --RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED-----------AHEVQRAAKRLDL- 601 (794)
T ss_pred --HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc-----------HHHHHHHHHHcCC-
Confidence 22444 3333558999999999999999999999887778999999999976 4678888888887
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~ 717 (805)
+|.|+|.+.+ ...+|+ ++|+||+||.+|+||++++||||||+|||+|+.||. +++.++.+|+++ +|+++
T Consensus 602 -~V~FLG~~dd------~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~Ea 670 (794)
T PLN02501 602 -NLNFLKGRDH------ADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSED 670 (794)
T ss_pred -EEEecCCCCC------HHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHH
Confidence 4999994332 335666 599999999999999999999999999999999985 457788888875 58999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
++++|.+++ .|+..+..+.+ ...|||+..++++++..+.
T Consensus 671 fAeAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 671 FVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 999997776 66654433322 3489999999999998765
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=1.7e-28 Score=269.92 Aligned_cols=258 Identities=15% Similarity=0.136 Sum_probs=188.5
Q ss_pred EcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHH-hhcCCEEEecCHHHHhhccc
Q 003661 411 GNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA-MNHTDFIITSTFQEIAGSKD 489 (805)
Q Consensus 411 ~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a-~~~AD~IIt~S~~~~~~~~~ 489 (805)
.|+....+.++....+.|+|+++++|+... ... ..+... .+.+|.||++|....+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~------------------l~~--~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA------------------ISH--TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech------------------hhH--HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 344333445554556678999999997210 000 112344 67899999999887663221
Q ss_pred cccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCC
Q 003661 490 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRN 569 (805)
Q Consensus 490 ~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~ 569 (805)
.|++. ..++.+||||+|.+.|.|.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3489999999999877654211 124
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCc
Q 003661 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 570 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~ 649 (805)
+.++++.|++.+.||++.|++|++++.+..+++.|+++|++... .++ .++.+ +.| .
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~-----------~~l------~~~~~---~~~----~ 197 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD-----------PRL------FGLNG---VKT----P 197 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc-----------hhh------ccccc---eec----c
Confidence 45777888999999999999999999888889999999976431 111 12222 234 5
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC-----------------
Q 003661 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP----------------- 712 (805)
Q Consensus 650 v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p----------------- 712 (805)
++.+++..+++. +|+||+||..|+||++++||||||+|||+|+.||..|+|.++.+|+++++
T Consensus 198 v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~ 276 (331)
T PHA01630 198 LPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYF 276 (331)
T ss_pred CCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccc
Confidence 677999999995 99999999999999999999999999999999999999999988887753
Q ss_pred --CCHHHHHHHHHHHHHHhhCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003661 713 --YHGEQAAEILVDFFEKCKAD--PSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 713 --~d~e~lA~aI~~~l~~l~~d--p~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
.|.+++++++.+++ .| ++.++++..++.+.+.++|||+.++++++++|+.|
T Consensus 277 v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 277 LDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred cCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 26788888887665 44 24445555555555679999999999999999754
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=1.2e-26 Score=264.25 Aligned_cols=335 Identities=15% Similarity=0.152 Sum_probs=208.8
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCCcccCC--C-Chhh-------hhhcccccccchhhhHhHHHhh
Q 003661 403 QGKPDLIIGNYSDGNIVASLLA-HKLGVTQCTIAHALEKTKYP--D-SDIY-------WKNLDDKYHFSCQFTADLIAMN 471 (805)
Q Consensus 403 ~~kPDIIh~h~~~~~lva~lla-r~lgip~v~t~H~l~~~k~~--~-s~~~-------~~~~~~~y~~~~~~~~e~~a~~ 471 (805)
..++||+|+|.|..+..+..++ +..++|.|+|.|+.+...+. . .+.+ +..-.....+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999988888887 55789999999987655431 1 1111 1111112233344556888999
Q ss_pred cCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHh
Q 003661 472 HTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (805)
Q Consensus 472 ~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~ 551 (805)
.||.++|+|+.+...+...++ .+ +++ |||||+|.+.|.+..+........+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~Ll~-------------------~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHLLK-------------------RK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHHhC-------------------CC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 999999999988775544422 21 334 9999999999877654332211111222221
Q ss_pred hcchhhhhhhhccccCCCCcEEEE-EeeccC-CCCHHHHHHHHHHhHcc----CCC---eEEEEEeCCCCC---CCccHH
Q 003661 552 LYSDVENKEHLCVLKDRNKPILFT-MARLDR-VKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRRK---ESKDLE 619 (805)
Q Consensus 552 l~~~~~~~~~~G~l~~~~k~vIl~-vGRL~~-~Kgl~~LieA~~~l~~~----~~~---v~LvIVG~g~~~---~~~d~e 619 (805)
. ....+.++++ ++++++++| +||+.. .||++.+++|++++... ..+ +-|+|+=.+... ++....
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~ 358 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQ 358 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcch
Confidence 1 1123556676 778888877 799998 99999999999998651 232 334444333110 000000
Q ss_pred H-----HHHHH------------------------------------------------------------HHHHHHHHc
Q 003661 620 E-----QAEMK------------------------------------------------------------KMYSLIDQY 634 (805)
Q Consensus 620 e-----~~e~~------------------------------------------------------------~l~~li~~l 634 (805)
. ++-++ .+-..+++.
T Consensus 359 ~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~ 438 (590)
T cd03793 359 AVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRI 438 (590)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHh
Confidence 0 00000 111122233
Q ss_pred CCCC----c--EEEecC---CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc----cccc
Q 003661 635 KLNG----Q--FRWISS---QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP----AEII 701 (805)
Q Consensus 635 ~L~~----~--V~flG~---~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~----~EiI 701 (805)
+|.+ + |.|+.. .+|.+-..+.+.+++ .+|+||+||++|+||++++||||||+|||+|+.+|+ .|++
T Consensus 439 ~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~-g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 439 QLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred cCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhh-hceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHh
Confidence 3322 2 455541 223333445677777 599999999999999999999999999999999999 5666
Q ss_pred ccC-ceEEEECCCCH---HHHHHHHHHHHHHhhCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 003661 702 VNG-KSGYHIDPYHG---EQAAEILVDFFEKCKADPSYWDKISLGGL-KRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 702 ~dg-~~G~li~p~d~---e~lA~aI~~~l~~l~~dp~~~~~ms~~ar-~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
.++ ..|+.+.+.+. .+.++.|.+.+.++... +.++.+.++++ ++..+.|+|+..++.|.+-|+.
T Consensus 518 ~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 518 EDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred ccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 555 35777763222 23333333333444444 56777777655 3444899999999999998753
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=1.8e-25 Score=247.84 Aligned_cols=343 Identities=15% Similarity=0.105 Sum_probs=233.7
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYG 356 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~ 356 (805)
|||+|++.. +||.+.... +|+++|+++||+|+ ++|..... . ....+.
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVPK--- 48 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhcccc---
Confidence 888887522 267777777 67777899999999 88864311 0 001111
Q ss_pred ccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHc-CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003661 357 TKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKEL-QGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 357 ~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~-~~kPDIIh~h~~~~~lva~llar~lgip~v~t~ 435 (805)
.++.+++++.....+ .+..........+... ...+.+.+ +.+||+||+|.+..++.+.++++..++|++++.
T Consensus 49 -~g~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~-~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 49 -AGIEFHFIPSGGLRR-----KGSLANLKAPFKLLKG-VLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred -CCCcEEEEeccCcCC-----CChHHHHHHHHHHHHH-HHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 356778877643211 0000000001111111 11222211 247999999987777777888888999999876
Q ss_pred cCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCC
Q 003661 436 HALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF 515 (805)
Q Consensus 436 H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~ 515 (805)
|+... . ...++.++.+|.+++++++... . ++
T Consensus 122 ~~~~~-----------~-----------~~~r~~~~~~d~ii~~~~~~~~---------------------~----~~-- 152 (357)
T PRK00726 122 QNAVP-----------G-----------LANKLLARFAKKVATAFPGAFP---------------------E----FF-- 152 (357)
T ss_pred CCCCc-----------c-----------HHHHHHHHHhchheECchhhhh---------------------c----cC--
Confidence 64210 0 1134567789999998874321 0 12
Q ss_pred CCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHH-HHHHH
Q 003661 516 DPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLV-EWYGK 594 (805)
Q Consensus 516 ~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~Li-eA~~~ 594 (805)
..++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 5789999999998765442211 12344 45678889999988888876555 89988
Q ss_pred hHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCC
Q 003661 595 NAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEA 674 (805)
Q Consensus 595 l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~ 674 (805)
+.+. + ..++++|+|.. +.+.+..+ +++. |.+.|++ +++..+++. +|+++.+|-
T Consensus 209 ~~~~-~-~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g--- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG--- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC---
Confidence 8653 3 56788898853 33444445 6663 9999943 467888884 999999762
Q ss_pred CcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003661 675 FGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 675 fGltvlEAMA~GlPVVat~~GG--------~~EiI~dg~~G~li~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
+++++|||+||+|+|++..++ ..+.+.+..+|+++++.| +++++++|.+++ +|++.+++|+++++
T Consensus 262 -~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~ 336 (357)
T PRK00726 262 -ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAAR 336 (357)
T ss_pred -HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHHH
Confidence 689999999999999987653 235677788999999888 999999996665 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHH
Q 003661 745 KRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 745 ~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
+.+ +.++-+.+++.+.++.+
T Consensus 337 ~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 337 ALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred hcC-CcCHHHHHHHHHHHHhh
Confidence 986 88999999999988754
No 70
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.95 E-value=9.5e-26 Score=258.92 Aligned_cols=318 Identities=14% Similarity=0.091 Sum_probs=214.7
Q ss_pred HHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCE
Q 003661 397 EIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDF 475 (805)
Q Consensus 397 ~i~~~~~~kPDIIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~ 475 (805)
.+....+ ..|+|+.|.....+++.++.++ ...|+++..|... +.+.. |..+- .+ ..-...+-.+|.
T Consensus 124 ~i~~~~~-~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~Hipf----P~~e~-~~~lp------~~-~~ll~~~l~~D~ 190 (460)
T cd03788 124 AIAEVLR-PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPF----PSSEI-FRCLP------WR-EELLRGLLGADL 190 (460)
T ss_pred HHHHhcC-CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCC----CChHH-HhhCC------Ch-HHHHHHHhcCCE
Confidence 3444333 6799999999876777766554 4589999999643 22222 22111 00 111235667999
Q ss_pred EEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcch
Q 003661 476 IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSD 555 (805)
Q Consensus 476 IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~ 555 (805)
|...+......+.+......... .+ ........|. ..++.++|||||.+.|.+........
T Consensus 191 igF~t~~~~~~Fl~~~~~~l~~~-~~-~~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~-------------- 251 (460)
T cd03788 191 IGFQTERYARNFLSCCSRLLGLE-VT-DDGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQ-------------- 251 (460)
T ss_pred EEECCHHHHHHHHHHHHHHcCCc-cc-CCceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhH--------------
Confidence 99888765443222211000000 00 0000111111 24688999999998886542211100
Q ss_pred hhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003661 556 VENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKKMYSLI 631 (805)
Q Consensus 556 ~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~~e~~~l~~li 631 (805)
...++..+. .+++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|++...+ ..+.....+++.+++
T Consensus 252 ~~~~~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~--~~~~~~l~~~l~~~v 327 (460)
T cd03788 252 ERAAELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD--VPEYQELRREVEELV 327 (460)
T ss_pred HHHHHHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC--cHHHHHHHHHHHHHH
Confidence 001112333 46788999999999999999999999999877775 6799998753211 122234455666666
Q ss_pred HHcCCC------CcEEEe-cCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCccccccc
Q 003661 632 DQYKLN------GQFRWI-SSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEI 700 (805)
Q Consensus 632 ~~l~L~------~~V~fl-G~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlP----VVat~~GG~~Ei 700 (805)
.+.+.. ..|+++ | .++.+++..+++. +|+||+||..|+||++++||||||+| +|+|+.+|..+.
T Consensus 328 ~~in~~~g~~~~~~v~~~~g----~v~~~el~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~ 402 (460)
T cd03788 328 GRINGKFGTLDWTPVRYLYR----SLPREELAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE 402 (460)
T ss_pred HHHHhccCCCCceeEEEEeC----CCCHHHHHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh
Confidence 554321 235555 5 6778999999995 99999999999999999999999999 999999888777
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003661 701 IVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 701 I~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 762 (805)
+.+|++++|.|++++|++|.++++ .+++.++.+++++++.+ ++|||+.++++++.
T Consensus 403 ---~~~g~lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 403 ---LSGALLVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred ---cCCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 568999999999999999987662 35688899999999998 78999999999875
No 71
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=4.9e-25 Score=241.19 Aligned_cols=224 Identities=15% Similarity=0.146 Sum_probs=167.8
Q ss_pred HhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhh
Q 003661 469 AMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEI 548 (805)
Q Consensus 469 a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i 548 (805)
.|.+.+.+|++|....+.+.+ .|++ . .+ +|+||+|.+.|.|.......
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~-------- 136 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--V-DL-PVFHGINFKIVENAEKLVPQ-------- 136 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--C-ce-eeeCCCChhhcCccchhhHH--------
Confidence 455677899999877663221 2443 2 23 47899999998775422111
Q ss_pred HHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHH
Q 003661 549 EELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEM 624 (805)
Q Consensus 549 ~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~~e~ 624 (805)
.++.++.. .++.++|+++||+++.||++.|++|++++.+..++ ++|+++|++
T Consensus 137 ---------~r~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 137 ---------LKQKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ---------HHHHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 11223321 14678899999999999999999999999877664 578887732
Q ss_pred HHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003661 625 KKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN- 703 (805)
Q Consensus 625 ~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~d- 703 (805)
..+++++.++|+|+|... .++.+++.++++. +|+||+||.+|+||++++||||||+|||+|+.||..|++.+
T Consensus 193 -----~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~ 265 (335)
T PHA01633 193 -----QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQ 265 (335)
T ss_pred -----HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCc
Confidence 124567888999996322 4567899999995 99999999999999999999999999999999999997542
Q ss_pred ---------------C--ceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003661 704 ---------------G--KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 704 ---------------g--~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll 761 (805)
+ ..|+.+++.|++++|++|..+++ ..|++. .+.++++++ ++|+|+.++++|+
T Consensus 266 ~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~--~~~~~~---~~~~~~~~a-~~f~~~~~~~~~~ 334 (335)
T PHA01633 266 WNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFE--LQDREE---RSMKLKELA-KKYDIRNLYTRFL 334 (335)
T ss_pred cceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHh--ccChhh---hhHHHHHHH-HhcCHHHHHHHhh
Confidence 2 24778989999999999987752 134433 367777776 8999999999886
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=2.7e-24 Score=236.86 Aligned_cols=325 Identities=14% Similarity=0.123 Sum_probs=221.5
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccc
Q 003661 298 DTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKW 377 (805)
Q Consensus 298 dtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~ 377 (805)
.+||...++. .|+++|.++||+|+ |+|...... .+. ....++++.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARL-VPKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhc-ccccCCceEEEEecCcCC-----
Confidence 3578888887 77788899999999 888753211 011 111357788887643211
Q ss_pred cccccchhhHHH---HHHH--HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhh
Q 003661 378 ISRFEVWPYLET---YTED--VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKN 452 (805)
Q Consensus 378 isr~~i~~~l~~---f~~~--~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~ 452 (805)
...+..+.. +... ....+.+ +.+||+||+|.+..++.+.++++..++|+++..|+... .
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~--~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~-----------~ 125 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK--KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP-----------G 125 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH--hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------c
Confidence 111111111 1111 1122222 24799999998776777788888999999875553210 0
Q ss_pred cccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCC
Q 003661 453 LDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYF 532 (805)
Q Consensus 453 ~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~ 532 (805)
...++.++.+|.|++.|+...+. ++ +.++.+++||+|.+.+.
T Consensus 126 -----------~~~~~~~~~~~~vi~~s~~~~~~-------------------------~~--~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 -----------LANRLLARFADRVALSFPETAKY-------------------------FP--KDKAVVTGNPVREEILA 167 (350)
T ss_pred -----------HHHHHHHHhhCEEEEcchhhhhc-------------------------CC--CCcEEEECCCCchHHhh
Confidence 01234567799999999876541 11 56899999999987665
Q ss_pred CCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHH-HHHHHHHhHccCCCeEE-EEEeCC
Q 003661 533 PYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNL-VVVGGD 610 (805)
Q Consensus 533 p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~L-vIVG~g 610 (805)
+... ++.+++ ++++++|+++|+....|+... +++++..+.+ +++.+ +++|++
T Consensus 168 ~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4221 233555 567788888887777777654 5588888763 45664 466776
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEE
Q 003661 611 RRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTF 690 (805)
Q Consensus 611 ~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVV 690 (805)
. .+++.+.++++ .++|+|.|++ +++..+++. +|++|.+|- +++++|||+||+|+|
T Consensus 222 -~-----------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pvv 276 (350)
T cd03785 222 -D-----------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPAI 276 (350)
T ss_pred -c-----------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCEE
Confidence 2 24566666665 4789999943 578888885 999998762 689999999999999
Q ss_pred EcCccc--------cccccccCceEEEECCC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003661 691 ATCKGG--------PAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQ 758 (805)
Q Consensus 691 at~~GG--------~~EiI~dg~~G~li~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~ 758 (805)
+++.++ ..+.+.++.+|+++++. |+++++++|.+++ .|++.+++|++++++++ +.+.-+++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 349 (350)
T cd03785 277 LIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA-RPDAAERIAD 349 (350)
T ss_pred EeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHHh
Confidence 987654 34677777899999987 8999999997666 89999999999999887 5666665543
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=3.7e-24 Score=235.65 Aligned_cols=314 Identities=15% Similarity=0.124 Sum_probs=206.0
Q ss_pred HHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccccccccchhhHHHH---HH
Q 003661 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETY---TE 392 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f---~~ 392 (805)
.|+++|.++||+|+ ++|+..... . .. ....++.+.+++.....+ ......++....+ ..
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~-~-----~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE-K-----RL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch-h-----cc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67888899999999 888632110 0 00 111357777777643211 0011111111111 11
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhc
Q 003661 393 DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (805)
Q Consensus 393 ~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~ 472 (805)
.. ..+.+ +.+||+||+|....++.+.++++..++|+|+..|+... . ..+++..+.
T Consensus 81 ~l-~~~i~--~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~-----~~~~~~~~~ 135 (348)
T TIGR01133 81 QA-RRILK--KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-----------------G-----LTNKLLSRF 135 (348)
T ss_pred HH-HHHHH--hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc-----------------c-----HHHHHHHHH
Confidence 12 22222 24799999998776777777888899998754332100 0 113456778
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhh
Q 003661 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELL 552 (805)
Q Consensus 473 AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l 552 (805)
+|.+++.|+.+.+. -+..+|+||+|...+.+...
T Consensus 136 ~d~ii~~~~~~~~~------------------------------~~~~~i~n~v~~~~~~~~~~---------------- 169 (348)
T TIGR01133 136 AKKVLISFPGAKDH------------------------------FEAVLVGNPVRQEIRSLPVP---------------- 169 (348)
T ss_pred hCeeEECchhHhhc------------------------------CCceEEcCCcCHHHhcccch----------------
Confidence 99999999866441 13368999998765543211
Q ss_pred cchhhhhhhhccccCCCCcEEEEEeeccCCCCHHH-HHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003661 553 YSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTG-LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 631 (805)
Q Consensus 553 ~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li 631 (805)
++.+|+ ++++++|+++|+....|++.. +++++.++.+. ++++++++++.+ .+++++.+
T Consensus 170 ------~~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~-----------~~~l~~~~ 228 (348)
T TIGR01133 170 ------RERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND-----------LEKVKNVY 228 (348)
T ss_pred ------hhhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch-----------HHHHHHHH
Confidence 112455 567889999998877888654 55888887653 456655444321 25677777
Q ss_pred HHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc-------cccccccC
Q 003661 632 DQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG-------PAEIIVNG 704 (805)
Q Consensus 632 ~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG-------~~EiI~dg 704 (805)
+++++.+.+.|.. .++..+|+ ++|++|.+| + |++++|||+||+|+|+++.+| ..+++.++
T Consensus 229 ~~~~l~~~v~~~~--------~~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~ 295 (348)
T TIGR01133 229 QELGIEAIVTFID--------ENMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL 295 (348)
T ss_pred hhCCceEEecCcc--------cCHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC
Confidence 8887755555552 15677788 599999875 2 789999999999999997754 23578889
Q ss_pred ceEEEECCCC--HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003661 705 KSGYHIDPYH--GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 705 ~~G~li~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a 757 (805)
.+|++++++| +++++++|.+++ +||+.+++|++++++++ +...-++++
T Consensus 296 ~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~ 345 (348)
T TIGR01133 296 GAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA-KPDAAKRIA 345 (348)
T ss_pred CCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC-CccHHHHHH
Confidence 9999998876 999999997665 89999999999998876 445544444
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.92 E-value=2.4e-23 Score=238.06 Aligned_cols=318 Identities=16% Similarity=0.180 Sum_probs=214.7
Q ss_pred HHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcC
Q 003661 395 AVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 473 (805)
Q Consensus 395 ~~~i~~~~~~kPDIIh~h~~~~~lva~llar~l-gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 473 (805)
...+.+..+ .-|+|.+|.....+++.++.++. ..++.+..|.. +|.++++.. + + ....-...|-.|
T Consensus 118 A~~i~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHip----fP~~e~f~~-l-p------~r~~il~gll~~ 184 (456)
T TIGR02400 118 AEALAPLLQ-PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIP----FPSSEIYRT-L-P------WRRELLEGLLAY 184 (456)
T ss_pred HHHHHHhCC-CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCC----CCChHHHhh-C-C------cHHHHHHHHhcC
Confidence 334444433 45899999988878888777654 45777888853 333332211 1 1 111223478899
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeecCCCC--CCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHh
Q 003661 474 DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDV--FDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (805)
Q Consensus 474 D~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~--~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~ 551 (805)
|.|...|+..++.+......... +-....++.. -..++.++|||||.+.|.+.......... .
T Consensus 185 dligF~t~~~~~~Fl~~~~~~l~--------~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~----~--- 249 (456)
T TIGR02400 185 DLVGFQTYDDARNFLSAVSRELG--------LETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKR----I--- 249 (456)
T ss_pred CEEEECCHHHHHHHHHHHHHHhC--------CcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHH----H---
Confidence 99999999887755443221100 0000011111 13378899999999988654322110000 0
Q ss_pred hcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHHH
Q 003661 552 LYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKKM 627 (805)
Q Consensus 552 l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~~e~~~l 627 (805)
...++.+ .++++|+++||+++.||+..+++|++++.+.+|+ +.|+++|+....+ ..+.....+++
T Consensus 250 ----~~lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~--~~~~~~l~~~i 318 (456)
T TIGR02400 250 ----AELRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD--VPEYQQLRRQV 318 (456)
T ss_pred ----HHHHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC--chHHHHHHHHH
Confidence 0112222 3678999999999999999999999999877775 5688886432111 11222233334
Q ss_pred HHHHHHcCC-CC-----cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCcccc
Q 003661 628 YSLIDQYKL-NG-----QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGP 697 (805)
Q Consensus 628 ~~li~~l~L-~~-----~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlP----VVat~~GG~ 697 (805)
++++...+. .+ .|.+++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +|+|+.+|.
T Consensus 319 ~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~ 394 (456)
T TIGR02400 319 EELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA 394 (456)
T ss_pred HHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCC
Confidence 444332221 11 145544 2667899999999 599999999999999999999999999 999999998
Q ss_pred ccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003661 698 AEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 698 ~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 762 (805)
.+.+. +|++++|.|++++|++|.++++ .+++.++++.+++++++ .+||+..+++++++
T Consensus 395 ~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~ 452 (456)
T TIGR02400 395 AQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQRWREDFLS 452 (456)
T ss_pred hHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHH
Confidence 88883 7999999999999999987763 57888999999999998 67999999999886
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=2.8e-23 Score=236.11 Aligned_cols=284 Identities=15% Similarity=0.122 Sum_probs=192.7
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHH
Q 003661 405 KPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEI 484 (805)
Q Consensus 405 kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~ 484 (805)
+||+||++.++.-......+++.|+|++++-|.+... +...|+.+ . ...+..++.+|.|++.|+...
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~-------~--~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKF-------K--RFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHH-------H--HHHHHHHHhCCEEEECCHHHH
Confidence 6999998755432222334677899998875543211 11111111 1 123457789999999999877
Q ss_pred hhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhcc
Q 003661 485 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCV 564 (805)
Q Consensus 485 ~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~ 564 (805)
+.+.+ .|++ .. +.+++|+ +.+.+.+....... ...++.++
T Consensus 191 ~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~---------------~~~r~~~~- 230 (425)
T PRK05749 191 ERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA---------------ATLRRQLA- 230 (425)
T ss_pred HHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH---------------HHHHHHhc-
Confidence 63221 2333 44 7788884 33333222111110 01123333
Q ss_pred ccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003661 565 LKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 565 l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG 644 (805)
+++++++++|+. .|+.+.+++|+.++.+.+|+++|+|+|+|+. ..+++.++++++|+. .+.|.|
T Consensus 231 ---~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~----------r~~~l~~~~~~~gl~-~~~~~~ 294 (425)
T PRK05749 231 ---PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE----------RFKEVEELLKKAGLS-YVRRSQ 294 (425)
T ss_pred ---CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh----------hHHHHHHHHHhCCCc-EEEccC
Confidence 356788888864 6889999999999887789999999999863 125688888988885 355554
Q ss_pred CCCCc--------CChHHHHHHHHccCcEE-EeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-ceEEEECCC
Q 003661 645 SQMNR--------VRNGELYRYICDTKGAF-VQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNG-KSGYHIDPY 713 (805)
Q Consensus 645 ~~~~~--------v~~~el~~~la~aaDvf-V~PS~~E~fGltvlEAMA~GlPVVat~~-GG~~EiI~dg-~~G~li~p~ 713 (805)
..... -..+++..+|+. +|++ +.+|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++.++
T Consensus 295 ~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~ 373 (425)
T PRK05749 295 GEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVE 373 (425)
T ss_pred CCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEEC
Confidence 21100 024689999995 9995 5578889999999999999999999854 5667766553 468888899
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 714 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
|+++++++|.+++ +||+.+++|+++|++.+.++ ...++++++++.
T Consensus 374 d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 374 DAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred CHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 9999999997665 89999999999999999655 355666666654
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.90 E-value=2.2e-22 Score=225.33 Aligned_cols=263 Identities=12% Similarity=0.046 Sum_probs=180.2
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003661 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.+||+||++++..++.....++..++|++++.++.... ..+..+.+|.++++|+..
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~------------------------~~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLH------------------------KIWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCC------------------------cccccCCCCEEEECCHHH
Confidence 47999999877665444434445678987666543110 013466899999999876
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhc
Q 003661 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 563 (805)
Q Consensus 484 ~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G 563 (805)
.+.+. ..|++ ..|+.++++.++.. |.+.... ...++++|
T Consensus 159 ~~~l~--------------------~~gi~--~~ki~v~G~p~~~~-f~~~~~~------------------~~~~~~~~ 197 (380)
T PRK13609 159 KKVLV--------------------DIGVP--PEQVVETGIPIRSS-FELKINP------------------DIIYNKYQ 197 (380)
T ss_pred HHHHH--------------------HcCCC--hhHEEEECcccChH-HcCcCCH------------------HHHHHHcC
Confidence 55221 12444 66888876655432 2211111 11235577
Q ss_pred cccCCCCcE-EEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003661 564 VLKDRNKPI-LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 564 ~l~~~~k~v-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~f 642 (805)
+ ++++++ +++.|++...||+..+++++.+. ++++++++|++.. ...++++++++.++ ++|+|
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~---------~~~~~l~~~~~~~~--~~v~~ 260 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE---------ALKQSLEDLQETNP--DALKV 260 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH---------HHHHHHHHHHhcCC--CcEEE
Confidence 7 555554 55568888889999999987542 6789998876422 23456666666654 68999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccc----cccccCceEEEECCCCHHH
Q 003661 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPA----EIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 643 lG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~-~GG~~----EiI~dg~~G~li~p~d~e~ 717 (805)
+|++. ++..+++ ++|++|. ++.|++++|||+||+|+|+++ .+|.. +++.+ +|+.+.+.|+++
T Consensus 261 ~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~~ 327 (380)
T PRK13609 261 FGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDEE 327 (380)
T ss_pred Eechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHHH
Confidence 99432 4677888 5999985 567999999999999999985 55531 23433 455445579999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
++++|.+++ +||+.+++|++++++.. ..++++.+++.+++++..
T Consensus 328 l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 328 VFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENHV 371 (380)
T ss_pred HHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhhh
Confidence 999997665 89999999999998765 678999999999987653
No 77
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=4.7e-23 Score=204.10 Aligned_cols=160 Identities=31% Similarity=0.501 Sum_probs=143.6
Q ss_pred CCCCcEEEEEeeccCCCCHHHHHHHHHHhHcc-CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecC
Q 003661 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKL-RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 645 (805)
Q Consensus 567 ~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~ 645 (805)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+. ....+...++.+++.++|+|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~-----------~~~~~~~~~~~~~~~~~i~~~~- 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE-----------YKKELKNLIEKLNLKENIIFLG- 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC-----------HHHHHHHHHHHTTCGTTEEEEE-
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc-----------cccccccccccccccccccccc-
Confidence 67889999999999999999999999999864 6899999999663 2467888999999999999999
Q ss_pred CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHH
Q 003661 646 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDF 725 (805)
Q Consensus 646 ~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~ 725 (805)
.++.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|.++
T Consensus 80 ---~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~~ 155 (172)
T PF00534_consen 80 ---YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEKL 155 (172)
T ss_dssp ---SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHHH
T ss_pred ---ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHHH
Confidence 6667899999996 999999999999999999999999999999999999999999999999999999999999766
Q ss_pred HHHhhCCHHHHHHHHHHHHHH
Q 003661 726 FEKCKADPSYWDKISLGGLKR 746 (805)
Q Consensus 726 l~~l~~dp~~~~~ms~~ar~~ 746 (805)
+ .|++.++.|+++|+++
T Consensus 156 l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 156 L----NDPELRQKLGKNARER 172 (172)
T ss_dssp H----HHHHHHHHHHHHHHHH
T ss_pred H----CCHHHHHHHHHHhcCC
Confidence 6 8999999999999975
No 78
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=7.7e-21 Score=212.76 Aligned_cols=267 Identities=13% Similarity=0.081 Sum_probs=177.6
Q ss_pred cCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCH
Q 003661 402 LQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTF 481 (805)
Q Consensus 402 ~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~ 481 (805)
++.+.+|+.++.+....++ +...+.++|+.+++..... .... .. ....+...++.||.|+|+|.
T Consensus 99 ~~~~~~i~~~~~P~~~~~~---~~~~~~~~Vyd~~D~~~~~-~~~~-------~~-----~~~~e~~~~~~ad~vi~~S~ 162 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVA---ALLQASLVVYDCVDDLSAF-PGGP-------PE-----LLEAERRLLKRADLVFTTSP 162 (373)
T ss_pred cCCCCcEEEEeCccHHHHH---hhcCCCeEEEEcccchhcc-CCCC-------HH-----HHHHHHHHHHhCCEEEECCH
Confidence 3556667776655443333 3356788888888743221 1100 00 01346778999999999998
Q ss_pred HHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003661 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 482 ~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 561 (805)
...+..++. ..++.+||||+|.+.|.+........ +.
T Consensus 163 ~l~~~~~~~-------------------------~~~i~~i~ngvd~~~f~~~~~~~~~~-----------------~~- 199 (373)
T cd04950 163 SLYEAKRRL-------------------------NPNVVLVPNGVDYEHFAAARDPPPPP-----------------AD- 199 (373)
T ss_pred HHHHHHhhC-------------------------CCCEEEcccccCHHHhhcccccCCCh-----------------hH-
Confidence 766521111 35899999999998886643221000 00
Q ss_pred hccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEE
Q 003661 562 LCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFR 641 (805)
Q Consensus 562 ~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~ 641 (805)
. ...++++|+|+|++++.++++.+.++++ ..|+++|+++|++.... .. . .+...++|+
T Consensus 200 ~---~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~~-----------~~---~-~~~~~~nV~ 257 (373)
T cd04950 200 L---AALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVSI-----------DP---S-ALLRLPNVH 257 (373)
T ss_pred H---hcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCcc-----------Ch---h-HhccCCCEE
Confidence 0 1346789999999999888876655543 35789999999983210 00 1 111246899
Q ss_pred EecCCCCcCChHHHHHHHHccCcEEEeCCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003661 642 WISSQMNRVRNGELYRYICDTKGAFVQPALY-----EAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 716 (805)
Q Consensus 642 flG~~~~~v~~~el~~~la~aaDvfV~PS~~-----E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e 716 (805)
|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. +..+..++++ ++|++
T Consensus 258 ~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~~-~~d~~ 328 (373)
T cd04950 258 YLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVLI-ADDPE 328 (373)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEEe-CCCHH
Confidence 999 7788999999995 9999999863 4689999999999999999987654 4444444444 56999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
+++++|.+++. .+.....+ ++.+ +.+.|||+..++++++..+
T Consensus 329 ~~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 329 EFVAAIEKALL---EDGPARER---RRLR-LAAQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHHHHHHHHHHH
Confidence 99999987652 23221211 2222 5589999999999996543
No 79
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.88 E-value=4.2e-21 Score=232.32 Aligned_cols=322 Identities=14% Similarity=0.160 Sum_probs=214.2
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhc
Q 003661 394 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (805)
Q Consensus 394 ~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~ 472 (805)
....+....+ .-|+|-.|.....+++.++.++ ..+++.+-.|.. +|.+.++.. + + +...-+..|-.
T Consensus 137 FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiP----FPs~e~fr~-l-p------~r~~il~gll~ 203 (797)
T PLN03063 137 FLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTP----FPSSEIYKT-L-P------SRSELLRAVLT 203 (797)
T ss_pred HHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCC----CCCHHHHhh-C-C------CHHHHHHHHhc
Confidence 3334444443 3489999998877777777665 467888888864 333332221 1 1 11122347789
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHH---HhhhcCchhhH
Q 003661 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK---RRLKSFHPEIE 549 (805)
Q Consensus 473 AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~---~r~~~~~~~i~ 549 (805)
||.|-..|...+..+.......... ..+..++ ...|- ..++.++|||||.+.|.+..... .+..
T Consensus 204 aDligF~t~~y~r~Fl~~~~r~l~~-~~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~~~------- 270 (797)
T PLN03063 204 ADLIGFHTYDFARHFLSACTRILGV-EGTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQHMK------- 270 (797)
T ss_pred CCEEEeCCHHHHHHHHHHHHHHhCc-cccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHHHH-------
Confidence 9999998887665443321111000 0000011 01111 23688999999998776532211 1000
Q ss_pred HhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeE----EEEEeCCCCCCCccHHHHHHHH
Q 003661 550 ELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVN----LVVVGGDRRKESKDLEEQAEMK 625 (805)
Q Consensus 550 ~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~----LvIVG~g~~~~~~d~ee~~e~~ 625 (805)
..++. ..++++|+++||+++.||+..+++||.++.+.+|+++ |+.++..... +. .+++
T Consensus 271 -------~lr~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~---~~---~~y~ 332 (797)
T PLN03063 271 -------ELKRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRN---DV---PEYQ 332 (797)
T ss_pred -------HHHHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCC---ch---HHHH
Confidence 01111 2367899999999999999999999999988888753 5544432111 11 2233
Q ss_pred HHHHHHHHcC--CCC---cEEEecC--CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCc
Q 003661 626 KMYSLIDQYK--LNG---QFRWISS--QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCK 694 (805)
Q Consensus 626 ~l~~li~~l~--L~~---~V~flG~--~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlP----VVat~~ 694 (805)
++++.++++. +++ .+.|.+. ....++.+++..+|+ ++|+||+||..||||++++||||||+| +|+|..
T Consensus 333 ~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~ 411 (797)
T PLN03063 333 KLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEF 411 (797)
T ss_pred HHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEeeCC
Confidence 4444444442 222 2233321 112578899999999 599999999999999999999999999 999999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 695 GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 695 GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+|.++.+ +.+|++++|.|++++|++|.++++ .+++.+++..+..++++ .++||..+++.+++-+..
T Consensus 412 ~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~~ 477 (797)
T PLN03063 412 AGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELND 477 (797)
T ss_pred cCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHHH
Confidence 9999986 557999999999999999987762 48888999999999998 889999999999886643
No 80
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.88 E-value=1.4e-20 Score=211.29 Aligned_cols=264 Identities=15% Similarity=0.130 Sum_probs=184.0
Q ss_pred CCceEEEEcCCCc-hHHHHHHHH-----HcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEE
Q 003661 404 GKPDLIIGNYSDG-NIVASLLAH-----KLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFII 477 (805)
Q Consensus 404 ~kPDIIh~h~~~~-~lva~llar-----~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~II 477 (805)
.+||+||++++.. ...+.++++ ..++|+++++.++.... ..+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEEE
Confidence 4799999976543 222223332 24789888776542100 012457899999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhh
Q 003661 478 TSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVE 557 (805)
Q Consensus 478 t~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 557 (805)
++|+...+.+ ...|++ .+|+.++++++|.+.+.+.... ..
T Consensus 156 ~~s~~~~~~l--------------------~~~g~~--~~ki~v~g~~v~~~f~~~~~~~------------------~~ 195 (382)
T PLN02605 156 CPSEEVAKRA--------------------LKRGLE--PSQIRVYGLPIRPSFARAVRPK------------------DE 195 (382)
T ss_pred ECCHHHHHHH--------------------HHcCCC--HHHEEEECcccCHhhccCCCCH------------------HH
Confidence 9998765522 122554 6799999999987544332211 12
Q ss_pred hhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHc----cCCCeE-EEEEeCCCCCCCccHHHHHHHHHHHHHHH
Q 003661 558 NKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAK----LRELVN-LVVVGGDRRKESKDLEEQAEMKKMYSLID 632 (805)
Q Consensus 558 ~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~v~-LvIVG~g~~~~~~d~ee~~e~~~l~~li~ 632 (805)
.++.+|+ ++++++|+++|+....|++..+++++..... ..++.+ ++++|++. ...+++.+.
T Consensus 196 ~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~----------~~~~~L~~~-- 261 (382)
T PLN02605 196 LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK----------KLQSKLESR-- 261 (382)
T ss_pred HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH----------HHHHHHHhh--
Confidence 3466888 7788999999999999999999999976531 135565 55666552 112333332
Q ss_pred HcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCce
Q 003661 633 QYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK------GGPAEIIVNGKS 706 (805)
Q Consensus 633 ~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~------GG~~EiI~dg~~ 706 (805)
....+|+|+|++. ++..+|+ ++|++|.++ .|+|++|||+||+|+|+++. |+. +.+.++..
T Consensus 262 --~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~ 327 (382)
T PLN02605 262 --DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGF 327 (382)
T ss_pred --cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCc
Confidence 2245799999543 5888888 599999865 48999999999999999984 444 34445556
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 707 GYHIDPYHGEQAAEILVDFFEKCKAD-PSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 707 G~li~p~d~e~lA~aI~~~l~~l~~d-p~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
|+.+ .|+++++++|.+++ .| ++.+++|++++++.+ ...+++.+++.+.++..
T Consensus 328 g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 328 GAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELVR 380 (382)
T ss_pred eeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHhh
Confidence 7764 69999999997766 66 999999999999987 77888999988887643
No 81
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.86 E-value=6.7e-20 Score=186.21 Aligned_cols=121 Identities=31% Similarity=0.519 Sum_probs=103.3
Q ss_pred EEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHH
Q 003661 575 TMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE 654 (805)
Q Consensus 575 ~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~e 654 (805)
|+|++.+.||++.+++++..+.+..++++++++|++.+. ......+...+..++|.++| .++..+
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~-----------~~~~~~~~~~~~~~~v~~~~----~~~~~~ 173 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPER-----------EYLEELLAALLLLDRVIFLG----GLDPEE 173 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCCh-----------HHHHHHHHhcCCcccEEEeC----CCCcHH
Confidence 999999999999999999999988889999999998651 23333366778889999999 443445
Q ss_pred HHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003661 655 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHI 710 (805)
Q Consensus 655 l~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li 710 (805)
....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 174 ~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 174 LLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 55555535999999999999999999999999999999999999999999999874
No 82
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.85 E-value=2.2e-19 Score=210.53 Aligned_cols=345 Identities=13% Similarity=0.140 Sum_probs=237.1
Q ss_pred HHHHHcCCCceEEEEcCCCchHHHHHHHHH--------------cCCcEEEEecCCCccc---CCCChh-----------
Q 003661 397 EIAKELQGKPDLIIGNYSDGNIVASLLAHK--------------LGVTQCTIAHALEKTK---YPDSDI----------- 448 (805)
Q Consensus 397 ~i~~~~~~kPDIIh~h~~~~~lva~llar~--------------lgip~v~t~H~l~~~k---~~~s~~----------- 448 (805)
+.++.++.+||+||+|.|.++++...+.+. ...+.++|.|++...- ++....
T Consensus 153 ~~l~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~ 232 (601)
T TIGR02094 153 RALRALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANL 232 (601)
T ss_pred HHHHHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHh
Confidence 334455679999999999998877665332 1367899999975443 221111
Q ss_pred --hhhhcc---cccc-cchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEe
Q 003661 449 --YWKNLD---DKYH-FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV 522 (805)
Q Consensus 449 --~~~~~~---~~y~-~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VI 522 (805)
.+..+. ..+. ...++..-..++..||.|.++|+...+-.++..+.+ + .+.+....++.-|
T Consensus 233 gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~---~~~~~~~~~i~gI 298 (601)
T TIGR02094 233 GLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------Y---PGYEEEEVPIGYV 298 (601)
T ss_pred CCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------h---hhcccccCCccce
Confidence 110000 0000 001234456789999999999987665322221110 0 0111112358889
Q ss_pred cCCccCCCCCCCcHHHHhhhcCchh---------------------h-HHhhcchhhhhh--------------------
Q 003661 523 SPGADMSIYFPYTEEKRRLKSFHPE---------------------I-EELLYSDVENKE-------------------- 560 (805)
Q Consensus 523 pnGvD~~~f~p~~~~~~r~~~~~~~---------------------i-~~~l~~~~~~~~-------------------- 560 (805)
-||||...+.|.+...-........ + +...-++....+
T Consensus 299 tNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~ 378 (601)
T TIGR02094 299 TNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAIL 378 (601)
T ss_pred eCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhh
Confidence 9999999998755432211101001 1 222222222222
Q ss_pred -hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHcc--C--CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 003661 561 -HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKL--R--ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 561 -~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~--~--~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~ 635 (805)
.+|+..+++.+++++++|+...||++++++++.++.+. . .++++|+.|.+.+. |..-++.++.+.+++++..
T Consensus 379 ~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~---d~~gk~~i~~i~~la~~~~ 455 (601)
T TIGR02094 379 MATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPA---DGEGKEIIQRIVEFSKRPE 455 (601)
T ss_pred hhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcc---cchHHHHHHHHHHHHhccc
Confidence 35555688999999999999999999999998888642 1 36999999999652 3334456777888888755
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEe-CCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC-
Q 003661 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ-PAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDP- 712 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~-PS~-~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p- 712 (805)
.+++|.|+- - -+..+.+.|-.++|++++ ||. +|++|++-+=||..|.+.+++..|...|.. ++.|||.|.+
T Consensus 456 ~~~kv~f~~----~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~ 529 (601)
T TIGR02094 456 FRGRIVFLE----N-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDG 529 (601)
T ss_pred CCCCEEEEc----C-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCC
Confidence 678999985 2 345666666667999999 999 999999999999999999999999988887 6789999984
Q ss_pred -----------CCHHHHHHHHHHHHHHhh-CC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003661 713 -----------YHGEQAAEILVDFFEKCK-AD-----PSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 713 -----------~d~e~lA~aI~~~l~~l~-~d-----p~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly 764 (805)
.|.+++-++|.+.+..+. ++ |..|.+|.++|.+.....|||++++++|.++|
T Consensus 530 ~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 530 EEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 789999999977663333 33 67799999999998777999999999999987
No 83
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.85 E-value=3.5e-20 Score=224.08 Aligned_cols=322 Identities=15% Similarity=0.131 Sum_probs=210.4
Q ss_pred HHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcC
Q 003661 395 AVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 473 (805)
Q Consensus 395 ~~~i~~~~~~kPDIIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 473 (805)
...+....+ .-|+|..|.....+++..+.++ ...++.+-.|.. +|.+.+.... + +...-...|-.+
T Consensus 124 A~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~p----fP~~~~f~~l--p------~~~~ll~~ll~~ 190 (726)
T PRK14501 124 AEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIP----FPSFEVFRLL--P------WREEILEGLLGA 190 (726)
T ss_pred HHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCC----CCChHHHhhC--C------ChHHHHHHHhcC
Confidence 334444433 4589999998887777777655 356788888865 3333332211 1 111223478899
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhc
Q 003661 474 DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 553 (805)
Q Consensus 474 D~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~ 553 (805)
|.|-..+......+.......... . +..+ .....|- ..++.++|||||.+.|.+......... ...
T Consensus 191 Dligf~t~~~~r~Fl~~~~~~l~~-~-~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~----~~~---- 256 (726)
T PRK14501 191 DLIGFHTYDYVRHFLSSVLRVLGY-E-TELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQE----EIR---- 256 (726)
T ss_pred CeEEeCCHHHHHHHHHHHHHHcCC-c-cCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHH----HHH----
Confidence 999888877655433322111000 0 0000 0111111 226889999999998865432111000 000
Q ss_pred chhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHHHHH
Q 003661 554 SDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKKMYS 629 (805)
Q Consensus 554 ~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~~e~~~l~~ 629 (805)
..++. ..++++|+++||+++.||+..+++||+++.+.+|+ ++|+++|.+.... -.+.....+++.+
T Consensus 257 ---~lr~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~--~~~~~~l~~~~~~ 326 (726)
T PRK14501 257 ---RLRQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTG--VPQYQEMKREIDE 326 (726)
T ss_pred ---HHHHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcc--hHHHHHHHHHHHH
Confidence 00111 24678999999999999999999999999877775 7899998542210 0122233444555
Q ss_pred HHHHcCC-------CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHc-----CCcEEEcCcccc
Q 003661 630 LIDQYKL-------NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-----GLPTFATCKGGP 697 (805)
Q Consensus 630 li~~l~L-------~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~-----GlPVVat~~GG~ 697 (805)
++.+.+. .+-+.+.| .++.+++..+|+ ++|+||+||..||||++++||||| |.||++...|+.
T Consensus 327 ~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~ 401 (726)
T PRK14501 327 LVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAA 401 (726)
T ss_pred HHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEecccchh
Confidence 5544321 12234556 678899999999 599999999999999999999999 456777777888
Q ss_pred ccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 698 AEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 698 ~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
.+++ .|++++|.|++++|++|.++++ .+++.+....+++++++ .+|||..+++++++.|+.
T Consensus 402 ~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 402 AELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELRE 462 (726)
T ss_pred HHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Confidence 8775 4899999999999999987762 23445555556788888 799999999999998764
No 84
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=6.5e-19 Score=186.69 Aligned_cols=290 Identities=23% Similarity=0.324 Sum_probs=208.8
Q ss_pred ceEEEEcCCCchH---HHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 406 PDLIIGNYSDGNI---VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 406 PDIIh~h~~~~~l---va~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
+|++|.+...... .........+.+.+...|....................+.+ ........+..+.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLL---KRLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHH---HHHHHhccccccEEEECCHH
Confidence 5999987665433 34555566778888888876442211111000000000000 00011112247778888765
Q ss_pred HHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 562 (805)
.....+.. .. ..++.++||++|...+.+.. .
T Consensus 161 ~~~~~~~~--------------------~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEAL--------------------GV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHHh--------------------CC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 42211100 11 23788999999988776540 1
Q ss_pred ccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003661 563 CVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 563 G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~f 642 (805)
++..+..+..++++||+.+.||++.+++++..+.+..+++.++++|.+... .+.+..++.+++..++|.|
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~v~~ 261 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER----------REELEKLAKKLGLEDNVKF 261 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc----------HHHHHHHHHHhCCCCcEEE
Confidence 111011247899999999999999999999999887777999999999651 2455668888888889999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHH
Q 003661 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEIL 722 (805)
Q Consensus 643 lG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI 722 (805)
+| .++..++..+++. +|++++||..|+||++++|||++|+|||+++.+|..+++.++.+|+++++.|.+++++++
T Consensus 262 ~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i 336 (381)
T COG0438 262 LG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336 (381)
T ss_pred ec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHH
Confidence 99 5556788888875 899999999999999999999999999999999999999988789977777899999999
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 723 VDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 723 ~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
..++ ++++.++.+++.+++.+.+.|+|+..++++.+++..
T Consensus 337 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 337 EQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEE 376 (381)
T ss_pred HHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 7766 777889999987788877899999999999988764
No 85
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.83 E-value=4.7e-19 Score=199.76 Aligned_cols=262 Identities=15% Similarity=0.144 Sum_probs=177.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003661 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.+||+||++.+..++.....++..++|+++...+.... ..+..+.+|.+++.|+..
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~------------------------~~w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH------------------------KNWITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc------------------------cccccCCCCEEEECCHHH
Confidence 48999999866553322222345689986544432100 012346899999999877
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhc
Q 003661 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 563 (805)
Q Consensus 484 ~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G 563 (805)
.+.+ ...|++ ..|+.+++++++.....+.... ..++++|
T Consensus 159 ~~~l--------------------~~~gi~--~~ki~v~GiPv~~~f~~~~~~~-------------------~~~~~~~ 197 (391)
T PRK13608 159 KQDF--------------------IDVGID--PSTVKVTGIPIDNKFETPIDQK-------------------QWLIDNN 197 (391)
T ss_pred HHHH--------------------HHcCCC--HHHEEEECeecChHhcccccHH-------------------HHHHHcC
Confidence 6521 123554 6788888887764322221111 1234567
Q ss_pred cccCCCCcE-EEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003661 564 VLKDRNKPI-LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 564 ~l~~~~k~v-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~f 642 (805)
+ ++++++ +++.|+++..||++.+++++.+ ..+++++++++|+.. ... .++.+.++..++|.+
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~---------~l~---~~l~~~~~~~~~v~~ 260 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK---------ELK---RSLTAKFKSNENVLI 260 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH---------HHH---HHHHHHhccCCCeEE
Confidence 6 555555 5678899989999999998632 336789987765421 111 233334455578999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCceEEEECCCCHHH
Q 003661 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGP----AEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 643 lG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~-~GG~----~EiI~dg~~G~li~p~d~e~ 717 (805)
+|++ +++..+|+ ++|++|. .+.|+|+.|||+||+|+|+++ .+|. ..++.+...|+.. .|+++
T Consensus 261 ~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~~ 327 (391)
T PRK13608 261 LGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPEE 327 (391)
T ss_pred Eecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHHH
Confidence 9953 36888888 4999997 457999999999999999985 3431 2233455566654 48999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
++++|.+++ +|++.+++|++++++.. ..|+++.+++++++++.
T Consensus 328 l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 328 AIKIVASLT----NGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 999996665 89999999999999986 67999999999998764
No 86
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.79 E-value=5.3e-18 Score=189.03 Aligned_cols=273 Identities=12% Similarity=0.065 Sum_probs=179.0
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHH-hhcCCEEEecCH
Q 003661 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIA-MNHTDFIITSTF 481 (805)
Q Consensus 404 ~kPDIIh~h~~~-~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a-~~~AD~IIt~S~ 481 (805)
.+||+||+|... ..+.++++++.+|+|++++-+++.... ....|.. . ..+.+ .+.+|.++++|.
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~---~~~~~~~--~---------~~r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGD---RYSPMPE--E---------INRQLTGHIADLHFAPTE 150 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCC---CCCCCcc--H---------HHHHHHHHHHHhccCCCH
Confidence 479999999743 467788999999999987655441110 0000100 0 01122 335899999998
Q ss_pred HHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCc-cCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhh
Q 003661 482 QEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 482 ~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 560 (805)
...+.+.+ .|++ +.++.+++||+ |...+.+..... ...++
T Consensus 151 ~~~~~l~~--------------------~G~~--~~~I~vign~~~d~~~~~~~~~~~-----------------~~~~~ 191 (365)
T TIGR00236 151 QAKDNLLR--------------------ENVK--ADSIFVTGNTVIDALLTNVEIAYS-----------------SPVLS 191 (365)
T ss_pred HHHHHHHH--------------------cCCC--cccEEEeCChHHHHHHHHHhhccc-----------------hhHHH
Confidence 87663221 2554 67999999996 432111100000 01122
Q ss_pred hhccccCCCCcEEEEEe-ec-cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC
Q 003661 561 HLCVLKDRNKPILFTMA-RL-DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 638 (805)
Q Consensus 561 ~~G~l~~~~k~vIl~vG-RL-~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~ 638 (805)
.++. +++++++.+ |. ...||+..+++++.++.+..++++++++|++.. ...+ .+.+.++..+
T Consensus 192 ~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~---------~~~~---~~~~~~~~~~ 255 (365)
T TIGR00236 192 EFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP---------VVRE---PLHKHLGDSK 255 (365)
T ss_pred hcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh---------HHHH---HHHHHhCCCC
Confidence 3332 334555554 54 245899999999999887778899999875422 1111 1334445667
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHH
Q 003661 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat-~~GG~~EiI~dg~~G~li~p~d~e~ 717 (805)
+|+|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..+++.+| +|+++ +.|+++
T Consensus 256 ~v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~ 323 (365)
T TIGR00236 256 RVHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKEN 323 (365)
T ss_pred CEEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHH
Confidence 899998 6667788999996 99999887 66789999999999996 778888988866 55666 479999
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003661 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 762 (805)
++++|.+++ +||+.+++|++++.... ...+++++++.+.+
T Consensus 324 i~~ai~~ll----~~~~~~~~~~~~~~~~g-~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 324 ITKAAKRLL----TDPDEYKKMSNASNPYG-DGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHHH----hChHHHHHhhhcCCCCc-CchHHHHHHHHHHh
Confidence 999997665 89999998887663222 34455555555444
No 87
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.78 E-value=7.7e-17 Score=184.26 Aligned_cols=313 Identities=11% Similarity=0.078 Sum_probs=213.1
Q ss_pred CceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003661 405 KPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 405 kPDIIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.-|+|-.|.....+++..+.++ ...++-+-.|.. +|.+++... + + ....-+..|-.||.|=.-|+..
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiP----FPs~eifr~-L-P------~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTP----FPSADVFNI-L-P------WREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCC----CCChHHHhh-C-C------chHHHHHHHhcCCeEEeCCHHH
Confidence 4589999998877777777664 345677777754 333332211 1 1 1112234677899998888877
Q ss_pred Hhhccccccccccccc-cc---cccc---------eeeecCCCCCCC--cEEEecCCccCCCCCCCcHH---HHhhhcCc
Q 003661 484 IAGSKDTVGQYESHTA-FT---LPGL---------YRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEE---KRRLKSFH 545 (805)
Q Consensus 484 ~~~~~~~~gqy~~~~~-f~---~p~l---------~~~~~gi~~~~~--ki~VIpnGvD~~~f~p~~~~---~~r~~~~~ 545 (805)
+..+.+.......... .. .++. -....++.+... ++.++|.|||.+.|.+.... ..+.
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~---- 275 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMM---- 275 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHH----
Confidence 6654443322110000 00 0000 000011222222 47789999999888543211 1111
Q ss_pred hhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHH
Q 003661 546 PEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQ 621 (805)
Q Consensus 546 ~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~ 621 (805)
...++.+| ++++|++++|+++.||+...++||.++.+.+|+ +.|++||..... ...+..
T Consensus 276 ----------~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~--~v~~y~ 338 (487)
T TIGR02398 276 ----------ERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAAS--GMTIYD 338 (487)
T ss_pred ----------HHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcc--cchHHH
Confidence 11233333 678999999999999999999999999888885 799999987542 123334
Q ss_pred HHHHHHHHHHHHc-------CCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC----cEE
Q 003661 622 AEMKKMYSLIDQY-------KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTF 690 (805)
Q Consensus 622 ~e~~~l~~li~~l-------~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~Gl----PVV 690 (805)
...+++.+++.+. +..+-+.+.+ .++.+++..+++ .||+++.||..||++++..|+|+|+. |+|
T Consensus 339 ~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLI 413 (487)
T TIGR02398 339 ELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVLV 413 (487)
T ss_pred HHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCEE
Confidence 5566667777665 3344466666 788999999999 59999999999999999999999998 999
Q ss_pred EcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003661 691 ATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 691 at~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 762 (805)
.|..+|.++.+ ..+++++|.|++++|++|.++++ ..++.+++--+..++.+ .++|-..+++.++.
T Consensus 414 LSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~~fl~ 478 (487)
T TIGR02398 414 LSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWADEFLA 478 (487)
T ss_pred Eeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHH
Confidence 99999998766 35899999999999999988773 45556666666667776 78899888888775
No 88
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.77 E-value=4e-17 Score=180.18 Aligned_cols=245 Identities=15% Similarity=0.157 Sum_probs=166.0
Q ss_pred Cc-eEEEEcCCCch---HHHHHH--HHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEe
Q 003661 405 KP-DLIIGNYSDGN---IVASLL--AHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (805)
Q Consensus 405 kP-DIIh~h~~~~~---lva~ll--ar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt 478 (805)
++ |+||.+++... +...++ .++.|+|+|+++|+++........ + + ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~---------~-~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNY---------Y-L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccc---------h-h---hHHHHHHHHhCCEEEE
Confidence 46 99999887642 112222 234589999999997543211000 0 0 1235678999999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhh
Q 003661 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 479 ~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 558 (805)
.|+.+.+.+++ .|+. ..++.++++..+.....+. .
T Consensus 130 ~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~----~------------------- 164 (333)
T PRK09814 130 HSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV----K------------------- 164 (333)
T ss_pred CCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc----c-------------------
Confidence 99988773322 2443 4567666665433111000 0
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG 638 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~ 638 (805)
....++.|+|+|++.+.+++ . ...++++|+|+|+|+.. + ...+
T Consensus 165 -------~~~~~~~i~yaG~l~k~~~l---~-------~~~~~~~l~i~G~g~~~-----------~---------~~~~ 207 (333)
T PRK09814 165 -------TPSFQKKINFAGNLEKSPFL---K-------NWSQGIKLTVFGPNPED-----------L---------ENSA 207 (333)
T ss_pred -------cccCCceEEEecChhhchHH---H-------hcCCCCeEEEECCCccc-----------c---------ccCC
Confidence 02345689999999954321 1 12467999999999751 1 3457
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCC-C----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceE
Q 003661 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPA-L----------YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSG 707 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~la~aaDvfV~PS-~----------~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G 707 (805)
+|.|+| .++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.++..|+|+++.+|
T Consensus 208 ~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G 281 (333)
T PRK09814 208 NISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLG 281 (333)
T ss_pred CeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCce
Confidence 899999 7788999999985 3333322 1 135788999999999999999999999999999999
Q ss_pred EEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003661 708 YHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQR 759 (805)
Q Consensus 708 ~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ 759 (805)
++++ +.++++++|.. .+++.+++|++++++.. +.+.-..++++
T Consensus 282 ~~v~--~~~el~~~l~~------~~~~~~~~m~~n~~~~~-~~~~~g~~~~~ 324 (333)
T PRK09814 282 FVVD--SLEELPEIIDN------ITEEEYQEMVENVKKIS-KLLRNGYFTKK 324 (333)
T ss_pred EEeC--CHHHHHHHHHh------cCHHHHHHHHHHHHHHH-HHHhcchhHHH
Confidence 9997 67888888864 24577899999999887 55544444433
No 89
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.76 E-value=1.4e-16 Score=178.24 Aligned_cols=249 Identities=14% Similarity=0.132 Sum_probs=161.6
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDIIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+||++.+.+ .......+++.|+|+++..|.. .|..... . . ....+.+|.|+++|+.
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~------~--~-~~~~~~~d~i~~~~~~ 144 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQG------R--A-FKIAKATDHVLALFPF 144 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCch------H--H-HHHHHHHhhheeCCcc
Confidence 4799999876432 2322344667799988665431 1111000 0 0 1135678999999976
Q ss_pred HHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 562 (805)
..+...+ .|+ ++.++.|.+......+... .+.++.+
T Consensus 145 ~~~~~~~--------------------~g~-----~~~~~G~p~~~~~~~~~~~-------------------~~~~~~l 180 (380)
T PRK00025 145 EAAFYDK--------------------LGV-----PVTFVGHPLADAIPLLPDR-------------------AAARARL 180 (380)
T ss_pred CHHHHHh--------------------cCC-----CeEEECcCHHHhcccccCh-------------------HHHHHHc
Confidence 5442111 121 2555666553321111111 1223456
Q ss_pred ccccCCCCcEEE-EEe-eccCC-CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHc-CCCC
Q 003661 563 CVLKDRNKPILF-TMA-RLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY-KLNG 638 (805)
Q Consensus 563 G~l~~~~k~vIl-~vG-RL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l-~L~~ 638 (805)
|+ ++++++|+ +.| |.... ++++.+++++..+.+.+++++++++|+++. ..+++.+.++++ ++.
T Consensus 181 ~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~----------~~~~~~~~~~~~~~~~- 247 (380)
T PRK00025 181 GL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK----------RREQIEEALAEYAGLE- 247 (380)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh----------hHHHHHHHHhhcCCCC-
Confidence 76 55666654 444 44444 457899999999887778899999987432 234566666666 553
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-----------------Ccccccccc
Q 003661 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-----------------CKGGPAEII 701 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat-----------------~~GG~~EiI 701 (805)
+.+.. +++..+++ ++|++|.+| |.+.+|||+||+|+|++ +.++.++++
T Consensus 248 -v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (380)
T PRK00025 248 -VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL 312 (380)
T ss_pred -eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh
Confidence 55543 36788888 499999997 88889999999999987 566777888
Q ss_pred ccCc--eEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003661 702 VNGK--SGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 702 ~dg~--~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v 747 (805)
.++. .+++.+..|++++++++.+++ +|++.+++|++++.+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 313 AGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred cCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 7764 567777889999999997665 89999999999875554
No 90
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.76 E-value=6.5e-16 Score=163.02 Aligned_cols=386 Identities=16% Similarity=0.229 Sum_probs=244.8
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCc----ccccee
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTT----CGQRLE 352 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~----~~~~~e 352 (805)
..|+++.|.-.- .||.+.+..--+|++.+. -..+- ++|.|..+ +..... ..+..+
T Consensus 44 ktvgfFHPYCNA----------GGGGErVLW~Avr~~q~k------~~n~~----~viYsGD~-n~t~~~IL~k~k~~F~ 102 (465)
T KOG1387|consen 44 KTVGFFHPYCNA----------GGGGERVLWKAVRITQRK------FPNNV----IVIYSGDF-NVTPENILNKVKNKFD 102 (465)
T ss_pred eEEEEecccccC----------CCCcceehhHHHHHHHHh------CCCce----EEEEeCCC-CCCHHHHHHHHHHhcC
Confidence 457777665542 378888888667765221 12222 33666553 211100 011222
Q ss_pred eecCccCeEEEEeccCcCCcccccccccccchhhHHHHHH---HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCC
Q 003661 353 KVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTE---DVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGV 429 (805)
Q Consensus 353 ~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~---~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgi 429 (805)
---+.+++..+.+..+. |+. ..-|++..-..+ ...-.+-+..+-.|||.+-....+ +.-...++..++
T Consensus 103 idlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~ 173 (465)
T KOG1387|consen 103 IDLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIFRRLRRI 173 (465)
T ss_pred ceecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHHHHHccC
Confidence 22233456666555442 222 234544322222 222233334456899988443222 222334556789
Q ss_pred cEEEEecCCCcc-cC-------CCC-hhhhhhcccccc-cchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccc
Q 003661 430 TQCTIAHALEKT-KY-------PDS-DIYWKNLDDKYH-FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTA 499 (805)
Q Consensus 430 p~v~t~H~l~~~-k~-------~~s-~~~~~~~~~~y~-~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~ 499 (805)
|++.-+|-.-.. .. +.+ -+.|..+.- |+ |++. -..+=..||.|++.|......++..++
T Consensus 174 ~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY-~rlFa~l---Y~~~G~~ad~vm~NssWT~nHI~qiW~------- 242 (465)
T KOG1387|consen 174 PVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAY-WRLFALL---YQSAGSKADIVMTNSSWTNNHIKQIWQ------- 242 (465)
T ss_pred ceEEEEecccccHHHHHHHHhhhhcchhhhHHHHH-HHHHHHH---HHhccccceEEEecchhhHHHHHHHhh-------
Confidence 999988842110 00 011 112221111 11 1111 123456899999999876554444432
Q ss_pred cccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeec
Q 003661 500 FTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARL 579 (805)
Q Consensus 500 f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL 579 (805)
..+..+|.|..+.+... ...+. ...+.+.++++|.+
T Consensus 243 ----------------~~~~~iVyPPC~~e~lk---------------------------s~~~t-e~~r~~~ll~l~Q~ 278 (465)
T KOG1387|consen 243 ----------------SNTCSIVYPPCSTEDLK---------------------------SKFGT-EGERENQLLSLAQF 278 (465)
T ss_pred ----------------ccceeEEcCCCCHHHHH---------------------------HHhcc-cCCcceEEEEEeec
Confidence 23566777755543111 11111 24567899999999
Q ss_pred cCCCCHHHHHHHHHHhHccC------CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChH
Q 003661 580 DRVKNLTGLVEWYGKNAKLR------ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNG 653 (805)
Q Consensus 580 ~~~Kgl~~LieA~~~l~~~~------~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~ 653 (805)
.|+||.. +++.++-..... +.++|+++|+-..+ +..+..+.|+.++++++++++|.|-- .++.+
T Consensus 279 RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRne-----eD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~ 348 (465)
T KOG1387|consen 279 RPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNE-----EDEERVKSLKDLAEELKIPKHVQFEK----NVPYE 348 (465)
T ss_pred CcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCCh-----hhHHHHHHHHHHHHhcCCccceEEEe----cCCHH
Confidence 9999998 666655443333 45899999998652 23456788999999999999999997 78899
Q ss_pred HHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-cccccc--C-ceEEEECCCCHHHHHHHHHHHHHHh
Q 003661 654 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIVN--G-KSGYHIDPYHGEQAAEILVDFFEKC 729 (805)
Q Consensus 654 el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~-~EiI~d--g-~~G~li~p~d~e~lA~aI~~~l~~l 729 (805)
++..++.. |.+.|+.-..|-||+.|+|+||+|+-+|+.+.||+ -|||.+ | .+||+.. +.++.|++|.+...
T Consensus 349 ~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~-- 423 (465)
T KOG1387|consen 349 KLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVK-- 423 (465)
T ss_pred HHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHH--
Confidence 99999995 99999999999999999999999999999999998 566654 3 4899984 67899999988774
Q ss_pred hCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003661 730 KADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 730 ~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly 764 (805)
.|++.+..|.++||..+ .+|+=....+.+.+.+
T Consensus 424 -~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 424 -LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred -cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 78888999999999998 8898887777777554
No 91
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.75 E-value=7.1e-17 Score=178.96 Aligned_cols=251 Identities=16% Similarity=0.130 Sum_probs=167.2
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDIIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+||+|.... .+.+.++++..|+|++++.|+... +.... .|.. . -....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~----~--------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEE----N--------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchH----H--------HHHHHHHhhhccCCCHH
Confidence 3799999997543 567788888999998877765422 10000 1110 0 01245678999999988
Q ss_pred HHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCc-cCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 561 (805)
..+.+ ...|++ ..++.+++|++ |...+.+..... ...++.
T Consensus 152 ~~~~l--------------------~~~G~~--~~kI~vign~v~d~~~~~~~~~~~-----------------~~~~~~ 192 (363)
T cd03786 152 ARRNL--------------------LQEGEP--PERIFVVGNTMIDALLRLLELAKK-----------------ELILEL 192 (363)
T ss_pred HHHHH--------------------HHcCCC--cccEEEECchHHHHHHHHHHhhcc-----------------chhhhh
Confidence 76622 123555 77899999985 532221111000 001233
Q ss_pred hccccCCCCcEEEEEeeccC---CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC-C
Q 003661 562 LCVLKDRNKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL-N 637 (805)
Q Consensus 562 ~G~l~~~~k~vIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L-~ 637 (805)
+|+ ++++.++++.||... .||++.+++++.++.+. ++.+++.|++.. .+++++.+.++++ .
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~-----------~~~l~~~~~~~~~~~ 257 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT-----------RPRIREAGLEFLGHH 257 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh-----------HHHHHHHHHhhccCC
Confidence 555 445567778999875 79999999999988653 466666665532 3567777778776 6
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHH
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGE 716 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~-GG~~EiI~dg~~G~li~p~d~e 716 (805)
++|+|+| .....++..+++. +|++|.||- | ++.|||+||+|+|+++. +...+.+++|. +..+. .|++
T Consensus 258 ~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~~~-~~~~ 325 (363)
T cd03786 258 PNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVLVG-TDPE 325 (363)
T ss_pred CCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEecC-CCHH
Confidence 7899998 5556788888884 999999984 4 47899999999999864 44566665442 33332 3689
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHH
Q 003661 717 QAAEILVDFFEKCKADPSYWDKI 739 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~m 739 (805)
+++++|.+++ +|+..+..|
T Consensus 326 ~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 326 AILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred HHHHHHHHHh----cCchhhhcC
Confidence 9999997665 788777665
No 92
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.72 E-value=1.1e-15 Score=182.39 Aligned_cols=341 Identities=14% Similarity=0.143 Sum_probs=230.0
Q ss_pred HHHHcCCCceEEEEcCCCchHHHH-----HHHHH----------cCCcEEEEecCCCccc---CCCChh-----------
Q 003661 398 IAKELQGKPDLIIGNYSDGNIVAS-----LLAHK----------LGVTQCTIAHALEKTK---YPDSDI----------- 448 (805)
Q Consensus 398 i~~~~~~kPDIIh~h~~~~~lva~-----llar~----------lgip~v~t~H~l~~~k---~~~s~~----------- 448 (805)
+++.++.+||+||+|.+.++++.. ++... ...+.|+|.|+....- ++...+
T Consensus 241 ~Lr~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~l 320 (778)
T cd04299 241 ALRALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYAREL 320 (778)
T ss_pred HHHHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHc
Confidence 344556689999999999988776 44321 1356899999964432 221111
Q ss_pred --hhhhcccccc-c----chhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEE
Q 003661 449 --YWKNLDDKYH-F----SCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI 521 (805)
Q Consensus 449 --~~~~~~~~y~-~----~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~V 521 (805)
.+..+...-. + ...+..-..+++.|+.|.++|+-.-+-.++++.. ...|.+....++.-
T Consensus 321 gl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~--------------~~~g~p~~~~~i~~ 386 (778)
T cd04299 321 GLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG--------------LWPGFPVEEVPIGH 386 (778)
T ss_pred CCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh--------------hhccCCcccCceec
Confidence 1111000000 0 0123445678999999999998653323333211 11233322446888
Q ss_pred ecCCccCCCCC-CCcHHHHhhhcC--------------------chhhHHhhcchhhhhh--------------------
Q 003661 522 VSPGADMSIYF-PYTEEKRRLKSF--------------------HPEIEELLYSDVENKE-------------------- 560 (805)
Q Consensus 522 IpnGvD~~~f~-p~~~~~~r~~~~--------------------~~~i~~~l~~~~~~~~-------------------- 560 (805)
|.||||...+. |....-- .+. .+. +++...+..+++
T Consensus 387 ITNGVh~~~W~~P~~~~l~--~~~~g~~w~~~~~~~~~~~~~~~i~d-~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~ 463 (778)
T cd04299 387 VTNGVHVPTWVAPEMRELY--DRYLGGDWRERPTDPELWEAVDDIPD-EELWEVRQQLRRRLIEFVRRRLRRQWLRRGAS 463 (778)
T ss_pred eeCCcchhhhcCHHHHHHH--HHhcCcchhhccchHHHHhhhcCCCc-HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCc
Confidence 99999998887 4322211 000 000 111111111111
Q ss_pred -----hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHcc----CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH
Q 003661 561 -----HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI 631 (805)
Q Consensus 561 -----~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~----~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li 631 (805)
..+...+++.++|+++.|+...|+.++++..+.++.+. ...+++|+.|.+.+. |..-+..++.+.+++
T Consensus 464 ~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~---d~~gK~iIk~i~~~a 540 (778)
T cd04299 464 AEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPA---DEPGKELIQEIVEFS 540 (778)
T ss_pred hhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcc---chHHHHHHHHHHHHH
Confidence 12444578889999999999999999999988877552 135999999998763 334456778888888
Q ss_pred HHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEE
Q 003661 632 DQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYH 709 (805)
Q Consensus 632 ~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~l 709 (805)
++....++|.|+- - -+..+.+.|-.++|++++||+ +|++|++-+=||.-|.+.+++-.|...|.. +|.||+.
T Consensus 541 ~~p~~~~kVvfle----~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwa 614 (778)
T cd04299 541 RRPEFRGRIVFLE----D-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWA 614 (778)
T ss_pred hCcCCCCcEEEEc----C-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceE
Confidence 8777788999985 2 345666666667999999999 999999999999999999999999999987 8899999
Q ss_pred ECC------------CCHHHHHHHHHHHHHHhh-C-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003661 710 IDP------------YHGEQAAEILVDFFEKCK-A-----DPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 710 i~p------------~d~e~lA~aI~~~l~~l~-~-----dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly 764 (805)
|.+ .|.+++-+.|.+.+.-+. + .|..|.+|.+++.+.+...|||++++++|.+-+
T Consensus 615 ig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 615 IGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred eCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 987 456666666654332122 3 278899999999999889999999999999854
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.69 E-value=4.8e-15 Score=179.47 Aligned_cols=317 Identities=13% Similarity=0.156 Sum_probs=209.6
Q ss_pred HHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcC
Q 003661 395 AVEIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 473 (805)
Q Consensus 395 ~~~i~~~~~~kPDIIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 473 (805)
...+....+ .=|+|-+|.....+++.++.++ ...++.+-.|.. +|.+.++. .+ + +...-+..|-.|
T Consensus 222 A~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiP----FPs~Eifr-~L-P------~r~elL~glL~a 288 (934)
T PLN03064 222 ADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTP----FPSSEIHR-TL-P------SRSELLRSVLAA 288 (934)
T ss_pred HHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCC----CCChHHHh-hC-C------cHHHHHHHHhcC
Confidence 334444433 3489999998887777777765 456788888864 33333221 11 1 112224477899
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCC--cEEEecCCccCCCCCCCcHH---HHhhhcCchhh
Q 003661 474 DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEE---KRRLKSFHPEI 548 (805)
Q Consensus 474 D~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~--ki~VIpnGvD~~~f~p~~~~---~~r~~~~~~~i 548 (805)
|.|=.-|+..+..+........ ++-....++..... ++.+.|-|||.+.|...... ..+..
T Consensus 289 DlIGFqT~~y~rhFl~~c~rlL--------g~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~------ 354 (934)
T PLN03064 289 DLVGFHTYDYARHFVSACTRIL--------GLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIK------ 354 (934)
T ss_pred CeEEeCCHHHHHHHHHHHHHHh--------CccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHH------
Confidence 9999888876654433221110 01111122322222 45678999999877543211 11111
Q ss_pred HHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeE--EEEE--eCCCCCCCccHHHHHHH
Q 003661 549 EELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVN--LVVV--GGDRRKESKDLEEQAEM 624 (805)
Q Consensus 549 ~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~--LvIV--G~g~~~~~~d~ee~~e~ 624 (805)
..++.+ .++.+|++++|+++.||+...+.||.++.+.+|+++ ++++ .-... +...+.....
T Consensus 355 --------~lr~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr--~~v~eY~~l~ 419 (934)
T PLN03064 355 --------ELKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTR--TDVPEYQKLT 419 (934)
T ss_pred --------HHHHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCC--CCcHHHHHHH
Confidence 112222 357799999999999999999999999888888754 4444 32211 1112223333
Q ss_pred HHHHHHHHHcC----CCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC----cEEEcCc
Q 003661 625 KKMYSLIDQYK----LNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL----PTFATCK 694 (805)
Q Consensus 625 ~~l~~li~~l~----L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~Gl----PVVat~~ 694 (805)
.++.+++.+.+ -.+ -|+++. ..++.+++..+|+ .+|+++.||..|||+++..|||+|+. +.|.|..
T Consensus 420 ~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEf 495 (934)
T PLN03064 420 SQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEF 495 (934)
T ss_pred HHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCC
Confidence 44445444433 111 255543 2478899999999 59999999999999999999999954 4445999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003661 695 GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 695 GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~L 763 (805)
+|.++.+ +..+++++|.|.+++|++|.++++ .+++.+++..+++++++ ..+||..+++.+++-
T Consensus 496 aGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~ 558 (934)
T PLN03064 496 AGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSE 558 (934)
T ss_pred CchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHH
Confidence 9998888 446999999999999999987763 48999999999999999 789999999997763
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.69 E-value=5.1e-15 Score=171.79 Aligned_cols=170 Identities=12% Similarity=0.138 Sum_probs=147.4
Q ss_pred CCcEEEEEe--eccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC---------
Q 003661 569 NKPILFTMA--RLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN--------- 637 (805)
Q Consensus 569 ~k~vIl~vG--RL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~--------- 637 (805)
.+..+++++ |+ +.|.++.+++++.++....|++.|.+.|-+.+. ...+.++++++++++.
T Consensus 318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~--------~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 318 LYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDN--------DITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred ccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCch--------hHHHHHHHHHHHHHhhhchhhhccc
Confidence 344677888 99 999999999999999999999999999988531 1235666777777666
Q ss_pred --------------------CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003661 638 --------------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 697 (805)
Q Consensus 638 --------------------~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~ 697 (805)
++|.|.| ..+..++.+.+.+ +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~g----y~~e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTT----LTNEEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEe----cCCHHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 7899999 4444588899996 89999999999999 9999999999999 5578
Q ss_pred ccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003661 698 AEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 698 ~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~L 763 (805)
.++|.||+||+++ +|..+++++|..++ .+++.|++++..+.+.+ ++||-+.+.++|.++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 9999999999999 59999999997776 89999999999999998 899999999988775
No 95
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.58 E-value=4.7e-15 Score=140.93 Aligned_cols=130 Identities=21% Similarity=0.282 Sum_probs=96.6
Q ss_pred CcEEEEEeeccCCCCHHHHHH-HHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Q 003661 570 KPILFTMARLDRVKNLTGLVE-WYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 570 k~vIl~vGRL~~~Kgl~~Lie-A~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~ 648 (805)
.++|+++|++.+.|+++.+++ ++.++.+..|++.|+|+|++++ ++.++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~-------------~l~~~-----~~~~v~~~g---- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD-------------ELKRL-----RRPNVRFHG---- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS--------------HHCCH-----HHCTEEEE-----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH-------------HHHHh-----cCCCEEEcC----
Confidence 467999999999999999999 9999999899999999999763 12222 235899999
Q ss_pred cCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003661 649 RVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 649 ~v~~~el~~~la~aaDvfV~PS~-~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l 726 (805)
.+ +++..+++. +|+.+.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 ~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 55 589999995 999999986 67899999999999999999988 677777666678877 789999999997765
No 96
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.54 E-value=3.9e-13 Score=153.36 Aligned_cols=334 Identities=15% Similarity=0.153 Sum_probs=181.0
Q ss_pred CceEEEEcCCCchHHHHHHHH-HcCCcEEEEecCCCcccCC---CChh-------hhhhcccccccchhhhHhHHHhhcC
Q 003661 405 KPDLIIGNYSDGNIVASLLAH-KLGVTQCTIAHALEKTKYP---DSDI-------YWKNLDDKYHFSCQFTADLIAMNHT 473 (805)
Q Consensus 405 kPDIIh~h~~~~~lva~llar-~lgip~v~t~H~l~~~k~~---~s~~-------~~~~~~~~y~~~~~~~~e~~a~~~A 473 (805)
+.=+.|+|-|..+....++.+ ...|..|+|.|+.-...+. ..+. .+......+....+...|+.+.+.|
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~A 222 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYA 222 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHS
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhc
Confidence 455678999987543333332 3467788999984221110 0111 1222223334445566788899999
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhc
Q 003661 474 DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLY 553 (805)
Q Consensus 474 D~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~ 553 (805)
|+..|+|+-.+...+..++. .+. .|+|||+|.+.|....+.+......+.+|.+.+-
T Consensus 223 dvFTTVSeITa~Ea~~LL~r----------------------~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~ 279 (633)
T PF05693_consen 223 DVFTTVSEITAKEAEHLLKR----------------------KPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVR 279 (633)
T ss_dssp SEEEESSHHHHHHHHHHHSS------------------------S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CeeeehhhhHHHHHHHHhCC----------------------CCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHH
Confidence 99999998776654444321 112 4789999998775554433221122233333221
Q ss_pred chhhhhhhhccccCCCCcEEEEEeecc-CCCCHHHHHHHHHHhHcc----CCC---eEEEEEeCCCCCCC----------
Q 003661 554 SDVENKEHLCVLKDRNKPILFTMARLD-RVKNLTGLVEWYGKNAKL----REL---VNLVVVGGDRRKES---------- 615 (805)
Q Consensus 554 ~~~~~~~~~G~l~~~~k~vIl~vGRL~-~~Kgl~~LieA~~~l~~~----~~~---v~LvIVG~g~~~~~---------- 615 (805)
+. ...++.+ ...+..+|++.||.. +.||++.++||++++... ..+ +-|+|+=..-.+-.
T Consensus 280 ~~--f~g~~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~ 356 (633)
T PF05693_consen 280 GH--FYGHYDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVT 356 (633)
T ss_dssp HH--STT---S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHH
T ss_pred HH--hcccCCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHH
Confidence 10 0011222 123456788999998 689999999999998532 223 33444433211100
Q ss_pred ---------------------------------ccHHHH-------------------------HHHHHHHHHHHHcCCC
Q 003661 616 ---------------------------------KDLEEQ-------------------------AEMKKMYSLIDQYKLN 637 (805)
Q Consensus 616 ---------------------------------~d~ee~-------------------------~e~~~l~~li~~l~L~ 637 (805)
.+.+.. ...+.+...+++.+|.
T Consensus 357 ~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~ 436 (633)
T PF05693_consen 357 KQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLF 436 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCC
Confidence 000000 0112233334455553
Q ss_pred ----Cc--EEEec---CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc-----
Q 003661 638 ----GQ--FRWIS---SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVN----- 703 (805)
Q Consensus 638 ----~~--V~flG---~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~d----- 703 (805)
++ |.|++ ...|.+-+-+.+.++.. +|+.|+||+||++|.|.+|+.++|+|+|.|+..|....+.+
T Consensus 437 N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~ 515 (633)
T PF05693_consen 437 NNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDP 515 (633)
T ss_dssp --TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HH
T ss_pred CCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccC
Confidence 23 55555 12334555677888884 99999999999999999999999999999999998766543
Q ss_pred CceEEEE-C--CCCHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 704 GKSGYHI-D--PYHGEQAAEILVDFFEKC-KADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 704 g~~G~li-~--p~d~e~lA~aI~~~l~~l-~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
...|+.+ + -.+.++.+++|.+.+... ..++..+..+..++.+.. +..+|+....-|.+-|..
T Consensus 516 ~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS-~~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 516 EEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLS-DLADWKNFGKYYEKAYDL 581 (633)
T ss_dssp GGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHG-GGGBHHHHCHHHHHHHHH
T ss_pred cCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Confidence 3456644 3 346778888887776654 356667777776766554 899999999998887654
No 97
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=5.8e-12 Score=133.67 Aligned_cols=377 Identities=13% Similarity=0.116 Sum_probs=231.0
Q ss_pred HHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHH-H
Q 003661 318 LLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA-V 396 (805)
Q Consensus 318 a~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~-~ 396 (805)
|..|++.|.+|+ ++.-..+. ..+++...++++|+.+|--+......+ .-.. -+..|.+-.. -
T Consensus 33 A~Sla~~gf~Vd----liGy~~s~--------p~e~l~~hprI~ih~m~~l~~~~~~p~----~~~l-~lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVESI--------PLEELLNHPRIRIHGMPNLPFLQGGPR----VLFL-PLKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecCCC--------ChHHHhcCCceEEEeCCCCcccCCCch----hhhh-HHHHHHHHHHHH
Confidence 456899999999 66433211 233344456788988765543222111 1111 1122222111 1
Q ss_pred HHHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcC
Q 003661 397 EIAKELQGKPDLIIGNYSDG---NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 473 (805)
Q Consensus 397 ~i~~~~~~kPDIIh~h~~~~---~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 473 (805)
..+.. ...||+|....+.+ -.++.+++...|.++++..|++..+- ..........+. ..+....|...-+.|
T Consensus 96 ~aL~~-~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl--~l~~~~g~~h~l--V~l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 96 WALFV-LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSL--QLKLKLGFQHPL--VRLVRWLEKYFGKLA 170 (444)
T ss_pred HHHHh-ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHH--HHHhhcCCCCch--HHHHHHHHHHhhccc
Confidence 11111 35799999887765 45667777788999999999865430 000001111111 112223466677899
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEec---C--CccCCC----CCCCcH----HHHh
Q 003661 474 DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS---P--GADMSI----YFPYTE----EKRR 540 (805)
Q Consensus 474 D~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIp---n--GvD~~~----f~p~~~----~~~r 540 (805)
|.-.|+|..+.+...+.+| |. +..|++ + +.+++. |-+-.. -..|
T Consensus 171 ~~nLcVT~AMr~dL~qnWg-------------------i~----ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar 227 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWG-------------------IN----RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAR 227 (444)
T ss_pred ccchhhHHHHHHHHHHhcC-------------------Cc----eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhc
Confidence 9999999988765444433 11 111111 1 111111 111110 0001
Q ss_pred hhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH-----c--cCCCeEEEEEeCCCCC
Q 003661 541 LKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA-----K--LRELVNLVVVGGDRRK 613 (805)
Q Consensus 541 ~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~-----~--~~~~v~LvIVG~g~~~ 613 (805)
....+..+...|..-+...-... ......++++.....+..++..|++|+.... + ..|.+-++|-|.||.
T Consensus 228 -~~q~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl- 304 (444)
T KOG2941|consen 228 -EPQDKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL- 304 (444)
T ss_pred -ccccchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-
Confidence 00112223333322221000111 1334456778888999999999999998432 1 246788888888976
Q ss_pred CCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEe--CCC-CCCCcHHHHHHHHcCCcEE
Q 003661 614 ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ--PAL-YEAFGLTVVEAMTCGLPTF 690 (805)
Q Consensus 614 ~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~--PS~-~E~fGltvlEAMA~GlPVV 690 (805)
.+++.+.++++++. +|.+.- .+...++...+++ ++|+.|. +|. -=..|++|+....||+||+
T Consensus 305 ----------kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPvc 369 (444)
T KOG2941|consen 305 ----------KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 369 (444)
T ss_pred ----------hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCcee
Confidence 46788889999885 465553 2666777888888 5886664 443 2338999999999999999
Q ss_pred EcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003661 691 ATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 691 at~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll 761 (805)
|-+...+.|.|+|++||++++ |.+++|+.+.-+++..-.|.+..+++.+++++. +.+.|+..-++..
T Consensus 370 A~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 370 AVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTA 436 (444)
T ss_pred eecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhh
Confidence 999999999999999999997 899999999999977777999999999999987 5777876555443
No 98
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.53 E-value=2.2e-12 Score=145.31 Aligned_cols=250 Identities=15% Similarity=0.095 Sum_probs=153.8
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDIIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+|++....+ ++.....++.+|+|+++.+ +.+. ..|.... -+...+.+|.|+++++.
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~-------waw~~~~-----------~r~l~~~~d~v~~~~~~ 148 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQV-------WAWRKWR-----------AKKIEKATDFLLAILPF 148 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcH-------hhcCcch-----------HHHHHHHHhHhhccCCC
Confidence 4899999877644 5555568888999987443 1111 1222111 22456789999999977
Q ss_pred HHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhh
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHL 562 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 562 (805)
+.+..++ . ..+..++.|++-.......... ...++.+
T Consensus 149 e~~~~~~--------------------~-----g~~~~~vGnPv~~~~~~~~~~~------------------~~~r~~l 185 (385)
T TIGR00215 149 EKAFYQK--------------------K-----NVPCRFVGHPLLDAIPLYKPDR------------------KSAREKL 185 (385)
T ss_pred cHHHHHh--------------------c-----CCCEEEECCchhhhccccCCCH------------------HHHHHHc
Confidence 6542110 1 1245567776633221100111 1123457
Q ss_pred ccccCCCCcEEEEEe--eccC-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCc
Q 003661 563 CVLKDRNKPILFTMA--RLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQ 639 (805)
Q Consensus 563 G~l~~~~k~vIl~vG--RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~ 639 (805)
|+ ++++++|+.+| |..+ .|++..+++++..+.+.+|++++++++.... ..+.+.++.+.++...+
T Consensus 186 gl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~----------~~~~~~~~~~~~~~~~~ 253 (385)
T TIGR00215 186 GI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK----------RRLQFEQIKAEYGPDLQ 253 (385)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch----------hHHHHHHHHHHhCCCCc
Confidence 76 66778877663 7776 6899999999999988888999877654421 12345556666666667
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC-ccccc----------------cccc
Q 003661 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC-KGGPA----------------EIIV 702 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~-~GG~~----------------EiI~ 702 (805)
|.+.+ .++..+|+ ++|++|.+| |.+.+|||+||+|+|.+. ..-.. .++.
T Consensus 254 v~~~~--------~~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~ 319 (385)
T TIGR00215 254 LHLID--------GDARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILA 319 (385)
T ss_pred EEEEC--------chHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhc
Confidence 77765 14566777 599999998 888889999999999872 22111 1222
Q ss_pred cCceEE-EE-CCCCHHHHHHHHHHHHHHhhCCH----HHHHHHHHHHHH
Q 003661 703 NGKSGY-HI-DPYHGEQAAEILVDFFEKCKADP----SYWDKISLGGLK 745 (805)
Q Consensus 703 dg~~G~-li-~p~d~e~lA~aI~~~l~~l~~dp----~~~~~ms~~ar~ 745 (805)
+..-.- +. +.-+++.+++.+.+++ .|+ +.++++.+.-.+
T Consensus 320 ~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 320 NRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred CCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHHH
Confidence 211111 11 2236778888886555 888 877776654443
No 99
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.36 E-value=4.7e-12 Score=113.12 Aligned_cols=92 Identities=22% Similarity=0.397 Sum_probs=85.3
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003661 665 AFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 665 vfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
+++.|+..++++..++|+||||+|+|+++.++..+++.+|..++.++ |++++.++|..++ +||+.+++|+++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 45678889999999999999999999999999999999999999998 8999999996655 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 003661 745 KRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 745 ~~v~~~ysw~~~a~~ll~ 762 (805)
+.+.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999863
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.28 E-value=5.2e-10 Score=128.61 Aligned_cols=312 Identities=15% Similarity=0.161 Sum_probs=176.2
Q ss_pred CceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003661 405 KPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 405 kPDIIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.-|+|-.|+....+++.++.++ ...++.+-.|... |.++.. +.+ + ....-+..|-.||.|-..|+..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPF----Ps~e~f-r~l-P------~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPF----PSSEIF-RCL-P------WREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHHH-TTS-T------THHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCC----CCHHHH-hhC-C------cHHHHHHHhhcCCEEEEecHHH
Confidence 6789999988877777777665 4678888888643 222221 111 1 1112234778999999999877
Q ss_pred Hhhccccccccccccccccccceeeec--CCCCCCC--cEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhh
Q 003661 484 IAGSKDTVGQYESHTAFTLPGLYRVVH--GIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 559 (805)
Q Consensus 484 ~~~~~~~~gqy~~~~~f~~p~l~~~~~--gi~~~~~--ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~ 559 (805)
+..+........ ++-.... ++.+... ++.+.|-|||.+.|........ ....+ ...+
T Consensus 209 ~~nFl~~~~r~l--------g~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~----v~~~~-------~~l~ 269 (474)
T PF00982_consen 209 ARNFLSCCKRLL--------GLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPE----VQERA-------EELR 269 (474)
T ss_dssp HHHHHHHHHHHS---------EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S-------HHH-------HHHH
T ss_pred HHHHHHHHHHHc--------CCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChH----HHHHH-------HHHH
Confidence 665433322211 0111111 2222222 4667899999876532211100 00000 0112
Q ss_pred hhhccccCCC-CcEEEEEeeccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHH-
Q 003661 560 EHLCVLKDRN-KPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ- 633 (805)
Q Consensus 560 ~~~G~l~~~~-k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~- 633 (805)
+.+ .+ ..+|+.+.|++..||+..=+.||.++.+.+| .+.|+-++-.... ...+.....+++.+++.+
T Consensus 270 ~~~-----~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~--~~~~y~~~~~~v~~~v~~I 342 (474)
T PF00982_consen 270 EKF-----KGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRE--DVPEYQELRREVEELVGRI 342 (474)
T ss_dssp HHT-----TT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-ST--TSHHHHHHHHHHHHHHHHH
T ss_pred Hhc-----CCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCc--cchhHHHHHHHHHHHHHHH
Confidence 222 24 4899999999999999999999999877665 4778877764332 122233444444444443
Q ss_pred ---cCCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCc----EEEcCccccccccccC
Q 003661 634 ---YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP----TFATCKGGPAEIIVNG 704 (805)
Q Consensus 634 ---l~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlP----VVat~~GG~~EiI~dg 704 (805)
+|-.+ .|.++- ..++.++++.+++. +|+++.+|..+|..++..|+.+|..+ +|.|...|.++.+.++
T Consensus 343 N~~~g~~~~~PI~~~~---~~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~ 418 (474)
T PF00982_consen 343 NGKYGTPDWTPIIYIY---RSLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEA 418 (474)
T ss_dssp HHHH-BTTB-SEEEE----S---HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS
T ss_pred HhhcccCCceeEEEEe---cCCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCc
Confidence 34322 366665 25788999999995 99999999999999999999999876 7778899998888543
Q ss_pred ceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003661 705 KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 705 ~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly 764 (805)
.++++|.|.+++|++|.++++ .+++.++..-+..++.+ ..+|-..+++++++-.
T Consensus 419 --al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 419 --ALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRDL 472 (474)
T ss_dssp ---EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHHH
T ss_pred --cEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHHh
Confidence 589999999999999998774 57777777777788887 7899998888887643
No 101
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.26 E-value=1.2e-11 Score=119.02 Aligned_cols=160 Identities=15% Similarity=0.229 Sum_probs=84.6
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccccc
Q 003661 300 GGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWIS 379 (805)
Q Consensus 300 GG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~is 379 (805)
||.+.|+. +|+++|.++||+|+ |+|...+... .+ ....++.+.++|.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED-------DE--EEEDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG--------S--EEETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc-------cc--cccCCceEEeccCCccchh------
Confidence 89999999 77777899999999 9986543321 11 1123688888887653210
Q ss_pred cccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhccccccc
Q 003661 380 RFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHF 459 (805)
Q Consensus 380 r~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~ 459 (805)
...+..+ .... .++.....+||+||+|++..++++.++++..++|+|+++|+...... ..|.. .
T Consensus 54 -~~~~~~~----~~~~-~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~--~---- 117 (160)
T PF13579_consen 54 -LRLLRFL----RRLR-RLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKR--R---- 117 (160)
T ss_dssp -GGHCCHH----HHHH-HHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH--H----
T ss_pred -hhhHHHH----HHHH-HHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchhh--H----
Confidence 0111111 1112 22233356899999999766677776666889999999997432110 11110 0
Q ss_pred chhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCC
Q 003661 460 SCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 525 (805)
Q Consensus 460 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnG 525 (805)
.....++..++.||.|+++|+...+.+.+ .|++ ++|+.|||||
T Consensus 118 -~~~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 118 -LYRWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp -HHHHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred -HHHHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 01123667899999999999988773322 2444 7799999998
No 102
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.26 E-value=7.2e-09 Score=115.58 Aligned_cols=325 Identities=14% Similarity=0.066 Sum_probs=171.0
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCccccccc
Q 003661 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWI 378 (805)
Q Consensus 299 tGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~i 378 (805)
|||-..-.+ .++++|.++||+|. ++++...-.. +-++. .+..+..++..+..+ . .
T Consensus 11 TGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~~~e~--------~l~~~-~g~~~~~~~~~~l~~---~-~ 65 (352)
T PRK12446 11 SAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQGIEK--------TIIEK-ENIPYYSISSGKLRR---Y-F 65 (352)
T ss_pred cHHHHHHHH--------HHHHHHHhCCCEEE----EEECCCcccc--------ccCcc-cCCcEEEEeccCcCC---C-c
Confidence 677666666 67778888999999 8875432110 01111 234444444322100 0 0
Q ss_pred ccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccc
Q 003661 379 SRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYH 458 (805)
Q Consensus 379 sr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~ 458 (805)
+ ...+.....+.....+...-..+.+||+||++....+..+.++++.+++|+++.-.+...
T Consensus 66 ~-~~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~------------------ 126 (352)
T PRK12446 66 D-LKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP------------------ 126 (352)
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc------------------
Confidence 0 001111112222222222212235899999987666667788999999998653222100
Q ss_pred cchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHH
Q 003661 459 FSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEK 538 (805)
Q Consensus 459 ~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~ 538 (805)
-.+-++..+.++.|+++-+.... +++ ..|+.++.|.+..+...+...
T Consensus 127 ----g~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~~~~~-- 173 (352)
T PRK12446 127 ----GLANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLKGNRE-- 173 (352)
T ss_pred ----cHHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCcccccccch--
Confidence 01234567788888765432211 122 357777777776544322111
Q ss_pred HhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEee-ccCCCCHHH-HHHHHHHhHccCCCeEEEEEeCCCCCCCc
Q 003661 539 RRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMAR-LDRVKNLTG-LVEWYGKNAKLRELVNLVVVGGDRRKESK 616 (805)
Q Consensus 539 ~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGR-L~~~Kgl~~-LieA~~~l~~~~~~v~LvIVG~g~~~~~~ 616 (805)
..++.+|+ ++++++|+.+|. .. .+.+.. +.+++..+. .+++++++-+..+
T Consensus 174 ------------------~~~~~~~l--~~~~~~iLv~GGS~G-a~~in~~~~~~l~~l~---~~~~vv~~~G~~~---- 225 (352)
T PRK12446 174 ------------------KGLAFLGF--SRKKPVITIMGGSLG-AKKINETVREALPELL---LKYQIVHLCGKGN---- 225 (352)
T ss_pred ------------------HHHHhcCC--CCCCcEEEEECCccc-hHHHHHHHHHHHHhhc---cCcEEEEEeCCch----
Confidence 11234565 567777777654 33 233422 233444332 3477766654421
Q ss_pred cHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc-
Q 003661 617 DLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG- 695 (805)
Q Consensus 617 d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~G- 695 (805)
+.+....+ .++...++. .+++..+|+. +|++|.= +-+.|+.|++++|+|.|.....
T Consensus 226 ----------~~~~~~~~---~~~~~~~f~-----~~~m~~~~~~-adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~ 282 (352)
T PRK12446 226 ----------LDDSLQNK---EGYRQFEYV-----HGELPDILAI-TDFVISR----AGSNAIFEFLTLQKPMLLIPLSK 282 (352)
T ss_pred ----------HHHHHhhc---CCcEEecch-----hhhHHHHHHh-CCEEEEC----CChhHHHHHHHcCCCEEEEcCCC
Confidence 11111111 133444522 2467788884 9998874 3478999999999999987442
Q ss_pred ----c----cccccccCceEEEECCC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003661 696 ----G----PAEIIVNGKSGYHIDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 696 ----G----~~EiI~dg~~G~li~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~L 763 (805)
+ .++.+.+...|..+... +++.+++++.+++ .|++.+++ ..+.+.....++++.++
T Consensus 283 ~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll----~~~~~~~~--------~~~~~~~~~aa~~i~~~ 348 (352)
T PRK12446 283 FASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELS----HNNEKYKT--------ALKKYNGKEAIQTIIDH 348 (352)
T ss_pred CCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHH----cCHHHHHH--------HHHHcCCCCHHHHHHHH
Confidence 1 12244444456665432 4677777775554 78765432 12345555555555544
No 103
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.24 E-value=5.6e-11 Score=116.37 Aligned_cols=168 Identities=17% Similarity=0.254 Sum_probs=83.7
Q ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCccccc
Q 003661 297 PDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRK 376 (805)
Q Consensus 297 pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~ 376 (805)
+..||.+.++. +|+++|+++||+|+ |++....+..... ........+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~-----------~~~~~~~~~~~~~------ 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE-----------LVKIFVKIPYPIR------ 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST-----------EEEE---TT-SST------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh-----------ccceeeeeecccc------
Confidence 46799999999 77777899999999 9887654432111 0011111111100
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccc
Q 003661 377 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDK 456 (805)
Q Consensus 377 ~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~ 456 (805)
....+.........+.+.+. +|||||+|.+.....+.+... ++|.|.+.|+..... ..+......
T Consensus 60 -----~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~-----~~~~~~~~~ 124 (177)
T PF13439_consen 60 -----KRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER-----RFLKSKLSP 124 (177)
T ss_dssp -----SS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H-----HTTTTSCCC
T ss_pred -----cccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc-----cccccccch
Confidence 01111112222233333333 799999998765444444444 999999999854210 000000000
Q ss_pred cccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCC
Q 003661 457 YHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 531 (805)
Q Consensus 457 y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f 531 (805)
+... .........+.+|.+||+|...++.+.+ .|++ +.|+.|||||||.+.|
T Consensus 125 ~~~~-~~~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 125 YSYL-NFRIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHH-HHCTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH
T ss_pred hhhh-hhhhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHc
Confidence 0000 0011233478999999999988774333 2444 6799999999999877
No 104
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.20 E-value=3.9e-08 Score=109.40 Aligned_cols=252 Identities=12% Similarity=0.116 Sum_probs=152.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003661 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
.+||+|++........+.+++..+|+|+++.-.+... ...| ++..+.|+.|.+.-...
T Consensus 90 ~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~an----------------k~~~~~a~~V~~~f~~~ 147 (357)
T COG0707 90 LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLAN----------------KILSKFAKKVASAFPKL 147 (357)
T ss_pred cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhH----------------HHhHHhhceeeeccccc
Confidence 4799999987777777788889999998865554321 1122 23445667665544321
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhc
Q 003661 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLC 563 (805)
Q Consensus 484 ~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G 563 (805)
. .+++ +.++.++.|.+..+... ......+ ..+
T Consensus 148 ~-------------------------~~~~--~~~~~~tG~Pvr~~~~~-~~~~~~~--------------------~~~ 179 (357)
T COG0707 148 E-------------------------AGVK--PENVVVTGIPVRPEFEE-LPAAEVR--------------------KDG 179 (357)
T ss_pred c-------------------------ccCC--CCceEEecCcccHHhhc-cchhhhh--------------------hhc
Confidence 1 1222 45788888877765553 2221111 111
Q ss_pred cccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC-CeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003661 564 VLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE-LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 564 ~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~-~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~f 642 (805)
..++++|+.+|. ..|...+-+++..+..... +++++...+... .+++...-.+++. ++.
T Consensus 180 ---~~~~~~ilV~GG---S~Ga~~ln~~v~~~~~~l~~~~~v~~~~G~~~-----------~~~~~~~~~~~~~---~~v 239 (357)
T COG0707 180 ---RLDKKTILVTGG---SQGAKALNDLVPEALAKLANRIQVIHQTGKND-----------LEELKSAYNELGV---VRV 239 (357)
T ss_pred ---cCCCcEEEEECC---cchhHHHHHHHHHHHHHhhhCeEEEEEcCcch-----------HHHHHHHHhhcCc---EEE
Confidence 126777777764 2333344444433332222 567766665521 3444444444443 777
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCceEEEECCCC
Q 003661 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP--------AEIIVNGKSGYHIDPYH 714 (805)
Q Consensus 643 lG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~--------~EiI~dg~~G~li~p~d 714 (805)
.++. ++|..+|+. +|+.|.= +-++|+.|..++|+|+|--..+.. +..+++...|.+++-.+
T Consensus 240 ~~f~------~dm~~~~~~-ADLvIsR----aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~ 308 (357)
T COG0707 240 LPFI------DDMAALLAA-ADLVISR----AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSE 308 (357)
T ss_pred eeHH------hhHHHHHHh-ccEEEeC----CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecccc
Confidence 7743 358888885 9999974 347999999999999998644433 33445555677776444
Q ss_pred --HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003661 715 --GEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 715 --~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll 761 (805)
++.+++.|.+++ ++|+..++|.+++++.. ..=.-+.+++.++
T Consensus 309 lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~-~p~aa~~i~~~~~ 352 (357)
T COG0707 309 LTPEKLAELILRLL----SNPEKLKAMAENAKKLG-KPDAAERIADLLL 352 (357)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHHHHHH
Confidence 778888886655 89999999999988875 2333333444333
No 105
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.20 E-value=2.8e-09 Score=121.52 Aligned_cols=319 Identities=14% Similarity=0.091 Sum_probs=207.2
Q ss_pred HHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCE
Q 003661 397 EIAKELQGKPDLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDF 475 (805)
Q Consensus 397 ~i~~~~~~kPDIIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~ 475 (805)
.+....+ .-|+|-.|.....+++..+.++ ...++.+-.|.. +|.+++.. .+ + +...-...|-.+|.
T Consensus 116 ~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiP----FPs~eifr-~L-P------~r~eil~glL~aDl 182 (474)
T PRK10117 116 KLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIP----FPTPEIFN-AL-P------PHDELLEQLCDYDL 182 (474)
T ss_pred HHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCC----CCChHHHh-hC-C------ChHHHHHHHHhCcc
Confidence 3344333 4589999998877777776654 346777788864 33333221 11 1 11122346778999
Q ss_pred EEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHH--HHhhhcCchhhHHhhc
Q 003661 476 IITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEE--KRRLKSFHPEIEELLY 553 (805)
Q Consensus 476 IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~--~~r~~~~~~~i~~~l~ 553 (805)
|=.-|+..+..+.+........ ....+......|- .-++.+.|-|||.+.|...... ..+.
T Consensus 183 IGFqt~~y~rnFl~~~~~~lg~--~~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~~~~------------ 245 (474)
T PRK10117 183 LGFQTENDRLAFLDCLSNLTRV--TTRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLPPKL------------ 245 (474)
T ss_pred ceeCCHHHHHHHHHHHHHHcCC--cccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHHHHH------------
Confidence 9888887665444332211000 0000000000110 1246778999998776322111 1110
Q ss_pred chhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC----eEEEEEeCCCCCCCccHHHHHHHHHHHH
Q 003661 554 SDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL----VNLVVVGGDRRKESKDLEEQAEMKKMYS 629 (805)
Q Consensus 554 ~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~d~ee~~e~~~l~~ 629 (805)
.+.++.+ .++.+|+.+.|+|..||+..=++||.++.+.+|+ +.|+-|+-.. .+.-.+......++.+
T Consensus 246 --~~lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ps--R~~v~~Y~~l~~~v~~ 316 (474)
T PRK10117 246 --AQLKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS--RGDVQAYQDIRHQLET 316 (474)
T ss_pred --HHHHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCC--CCccHHHHHHHHHHHH
Confidence 1112222 3577999999999999999999999998877664 6777776432 2223334445555555
Q ss_pred HHHHcCC----CC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-----cEEEcCccccc
Q 003661 630 LIDQYKL----NG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-----PTFATCKGGPA 698 (805)
Q Consensus 630 li~~l~L----~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~Gl-----PVVat~~GG~~ 698 (805)
++.+.+- .+ -|+++- ..++.+++..+++ ++|+++.++..+|+.|+.-|+.||-. ..|.|...|.+
T Consensus 317 ~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA 392 (474)
T PRK10117 317 EAGRINGKYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 392 (474)
T ss_pred HHHHHHhccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecccchH
Confidence 5554422 12 255543 3578899999999 59999999999999999999999976 37789999998
Q ss_pred cccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 699 EIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 699 EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
+.+. ..++++|.|.+++|++|.++++ .+++.+++.-+..++.+ .++|...+++.+++-..
T Consensus 393 ~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L~ 452 (474)
T PRK10117 393 NELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDLK 452 (474)
T ss_pred HHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHHH
Confidence 8884 3789999999999999998774 57777777777777777 78899999998887443
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.15 E-value=6e-09 Score=127.37 Aligned_cols=311 Identities=14% Similarity=0.136 Sum_probs=202.7
Q ss_pred eEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHh
Q 003661 407 DLIIGNYSDGNIVASLLAHK-LGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIA 485 (805)
Q Consensus 407 DIIh~h~~~~~lva~llar~-lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~ 485 (805)
|+|-.|.....++..++.++ ...++.+-.|.. +|.+.++... -+...-+..|-.||.|=.-|...+.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiP----FPs~eifr~L--------P~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSP----FPSSEIYKTL--------PIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCC----CCChHHHhhC--------CcHHHHHHHHhcCCeEEecCHHHHH
Confidence 89999988877777777665 457888888864 3333332111 1112224578899999998887766
Q ss_pred hccccccccccccccccccceeeecCCCCCCC--cEEEecCCccCCCCCCCc---HHHHhhhcCchhhHHhhcchhhhhh
Q 003661 486 GSKDTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYT---EEKRRLKSFHPEIEELLYSDVENKE 560 (805)
Q Consensus 486 ~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~--ki~VIpnGvD~~~f~p~~---~~~~r~~~~~~~i~~~l~~~~~~~~ 560 (805)
.+.......... ..... +...++.+... ++.+.|-|||...|.... +...+.. +.++
T Consensus 271 ~Fl~~~~r~lgl-~~~~~---~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~--------------~l~~ 332 (854)
T PLN02205 271 HFLSCCSRMLGL-SYESK---RGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVK--------------ELIK 332 (854)
T ss_pred HHHHHHHHHhCC-cccCC---CcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHH--------------HHHH
Confidence 444332211000 00000 00012222223 466789999987663221 1111111 1122
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCe----EEEEEeCCCCCCCccHHHHHHHHHHHHHHHHc--
Q 003661 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELV----NLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY-- 634 (805)
Q Consensus 561 ~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v----~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l-- 634 (805)
.++ .+++.+|+.+.|++..||+..=+.||.++.+.+|++ .|+-+.--.. +...+..+...++.+++.+.
T Consensus 333 ~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr--~~~~~y~~~~~ev~~~v~rIN~ 407 (854)
T PLN02205 333 QFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR--GKGKDVKEVQAETHSTVKRINE 407 (854)
T ss_pred Hhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC--cccHHHHHHHHHHHHHHHHHHh
Confidence 232 246789999999999999999999999998877764 6666664332 12223334444445555443
Q ss_pred --CCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-------------------cEEE
Q 003661 635 --KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-------------------PTFA 691 (805)
Q Consensus 635 --~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~Gl-------------------PVVa 691 (805)
|-.+ .|+++- ..++..++..+|+ .||+++.++..+|+.|+..|+.+|.. ..|.
T Consensus 408 ~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiL 483 (854)
T PLN02205 408 TFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVV 483 (854)
T ss_pred hcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEe
Confidence 3222 366664 2578899999999 59999999999999999999999864 3677
Q ss_pred cCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003661 692 TCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 692 t~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~L 763 (805)
|...|++..+. ..++++|.|.+++|++|.++++ .+++.++.--+..++++ ..+|-..+++.++.=
T Consensus 484 SEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~ 548 (854)
T PLN02205 484 SEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGYWARSFLQD 548 (854)
T ss_pred eeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 88888887773 3789999999999999998774 56666666666677777 788988888887763
No 107
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.14 E-value=7.5e-09 Score=118.10 Aligned_cols=144 Identities=11% Similarity=0.095 Sum_probs=111.8
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCc
Q 003661 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 570 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~ 649 (805)
+.-+++++. +..+++++++.+..|++.|.| |.+.+ ...+|.++ .++ ++.+.+.|..+
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te----------~s~kL~~L-~~y--~nvvly~~~~~-- 338 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE----------MSSKLMSL-DKY--DNVKLYPNITT-- 338 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc----------ccHHHHHH-Hhc--CCcEEECCcCh--
Confidence 344666661 999999999999999999999 76643 12577777 666 56666666333
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 003661 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEK 728 (805)
Q Consensus 650 v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~-GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~ 728 (805)
..+-.++. .||+++..|..|+|++++.||++.|+|+|+.+. -|+.+++.+ |.+++++|+++|+++|.+++
T Consensus 339 ---~~l~~ly~-~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL-- 409 (438)
T TIGR02919 339 ---QKIQELYQ-TCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL-- 409 (438)
T ss_pred ---HHHHHHHH-hccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh--
Confidence 34556666 599999999999999999999999999999844 477788876 88999999999999997766
Q ss_pred hhCCHHHHHHHHHHHHHHH
Q 003661 729 CKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 729 l~~dp~~~~~ms~~ar~~v 747 (805)
.||+.+++.-..-++.+
T Consensus 410 --~d~~~~~~~~~~q~~~a 426 (438)
T TIGR02919 410 --NDPNQFRELLEQQREHA 426 (438)
T ss_pred --cCHHHHHHHHHHHHHHh
Confidence 89987776555444443
No 108
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.00 E-value=9.4e-08 Score=107.92 Aligned_cols=124 Identities=18% Similarity=0.091 Sum_probs=80.4
Q ss_pred CCCCcEEEEEeeccC---CCCHHHHHHHHHHhHccCCCeEEE-EEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003661 567 DRNKPILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLV-VVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 567 ~~~k~vIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~f 642 (805)
+.+++++++.|+... .+-...+++++... +.+++ .+|..... . ..+.++|.+
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~------------~-------~~~~~~v~~ 292 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLG------------A-------EDLPDNVRV 292 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCcccc------------c-------cCCCCceEE
Confidence 345567788888754 23334455555443 34544 44444321 0 245689999
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CHH
Q 003661 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHIDPY--HGE 716 (805)
Q Consensus 643 lG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG----~~EiI~dg~~G~li~p~--d~e 716 (805)
.+ .++..+++. .+|++|.- +-..|+.||+++|+|+|.....+ .++.++....|..+++. +.+
T Consensus 293 ~~----~~p~~~ll~----~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWLLP----RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHHhh----hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 566666655 59999953 33479999999999999986654 34455555678777655 578
Q ss_pred HHHHHHHHHH
Q 003661 717 QAAEILVDFF 726 (805)
Q Consensus 717 ~lA~aI~~~l 726 (805)
++++++.+++
T Consensus 361 ~l~~al~~~l 370 (401)
T cd03784 361 RLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHh
Confidence 8888886655
No 109
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.00 E-value=1.1e-07 Score=108.14 Aligned_cols=325 Identities=16% Similarity=0.106 Sum_probs=204.9
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhc
Q 003661 394 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNH 472 (805)
Q Consensus 394 ~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~l-gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~ 472 (805)
...++....+ +=|+|-.|.....+++.++..+. ..++.+..|...+ .+.+..- + + +...-...+-.
T Consensus 137 FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfP----ssEvfr~-l-P------~r~eIl~gll~ 203 (486)
T COG0380 137 FADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFP----SSEVFRC-L-P------WREEILEGLLG 203 (486)
T ss_pred HHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCC----CHHHHhh-C-c------hHHHHHHHhhc
Confidence 3334444444 34999999888777777666654 4567788886533 2322210 0 0 11112336779
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeee-cCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHh
Q 003661 473 TDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVV-HGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEEL 551 (805)
Q Consensus 473 AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~-~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~ 551 (805)
||+|=.-++..+..+.+...+.... + +...+. .|......++..+|=|||...|........-. ..+.
T Consensus 204 ~dligFqt~~y~~nF~~~~~r~~~~---~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~----~~~~-- 272 (486)
T COG0380 204 ADLIGFQTESYARNFLDLCSRLLGV---T--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQ----EKVL-- 272 (486)
T ss_pred CCeeEecCHHHHHHHHHHHHHhccc---c--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchh----hHHH--
Confidence 9999888887766554443332110 0 000011 11110012455688899986663222111000 0000
Q ss_pred hcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccHHHHHHHHHH
Q 003661 552 LYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEEQAEMKKM 627 (805)
Q Consensus 552 l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~d~ee~~e~~~l 627 (805)
+.++.+ ..++.+|+.+.|+|..||+..=+.||.++.+.+| .+.|+-++.... ....+.+....++
T Consensus 273 -----el~~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr--~~v~~y~~~~~~i 341 (486)
T COG0380 273 -----ELKAEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR--EDVEEYQALRLQI 341 (486)
T ss_pred -----HHHHHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc--cccHHHHHHHHHH
Confidence 111112 2348899999999999999999999999987665 466777776543 1222223344444
Q ss_pred HHHHHHcCC-CCc-----EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCcccc
Q 003661 628 YSLIDQYKL-NGQ-----FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGP 697 (805)
Q Consensus 628 ~~li~~l~L-~~~-----V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~G----lPVVat~~GG~ 697 (805)
..++.+.+- -+. |.++- ..++..+++.+++ .+|+++.++.-||+.++..|+.||- =|.|-|...|.
T Consensus 342 ~~~V~rIN~~fG~~~~~Pv~~l~---~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGa 417 (486)
T COG0380 342 EELVGRINGEFGSLSWTPVHYLH---RDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGA 417 (486)
T ss_pred HHHHHHHHhhcCCCCcceeEEEe---ccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccc
Confidence 444443321 222 44443 2467899999999 4999999999999999999999985 47888888888
Q ss_pred ccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003661 698 AEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 698 ~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly 764 (805)
+..+.+ .++++|.|.+++|++|.++++ .+++.+++.-+..++.+ .++|-..+++.++.-.
T Consensus 418 a~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~l 477 (486)
T COG0380 418 ASELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDDL 477 (486)
T ss_pred hhhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 887754 799999999999999998774 67777777667777777 7788888888866543
No 110
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.97 E-value=1.4e-08 Score=102.30 Aligned_cols=180 Identities=20% Similarity=0.215 Sum_probs=117.4
Q ss_pred cceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeec
Q 003661 276 VFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVY 355 (805)
Q Consensus 276 ~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~ 355 (805)
|.||+||...|.|.. -||.|+.+. +|+.+|+++||+|+ |.|+...... . ..
T Consensus 1 mkkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EF 51 (185)
T ss_pred CceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Cc
Confidence 358999999998753 599999999 88889999999999 9988632211 1 12
Q ss_pred CccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHH--HHHcCCCceEEEEcCCC-chHHHHHHHH--HcCCc
Q 003661 356 GTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEI--AKELQGKPDLIIGNYSD-GNIVASLLAH--KLGVT 430 (805)
Q Consensus 356 ~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i--~~~~~~kPDIIh~h~~~-~~lva~llar--~lgip 430 (805)
...|++++.+|.... |. .....|-. ..+...+ .+.-+.+.|+||.+... ++++..++.+ +.|.|
T Consensus 52 ~y~gv~l~~i~~~~~-g~-------~~si~yd~---~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~ 120 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKN-GS-------AESIIYDF---LSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGK 120 (185)
T ss_pred ccCCeEEEEeCCCCC-Cc-------hHHHHHHH---HHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCc
Confidence 345789999987532 21 11111100 1111111 12112357899987766 5555555543 34779
Q ss_pred EEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHHHhhccccccccccccccccccceeeec
Q 003661 431 QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVH 510 (805)
Q Consensus 431 ~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~ 510 (805)
++++.|+++... ..|..+...|- ...|+++.+.||.+|+.|....+..++..
T Consensus 121 v~vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~y------------------- 172 (185)
T PF09314_consen 121 VVVNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKERY------------------- 172 (185)
T ss_pred EEECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHHc-------------------
Confidence 999999987533 36665555443 24688899999999999987665333221
Q ss_pred CCCCCCCcEEEecCCcc
Q 003661 511 GIDVFDPKFNIVSPGAD 527 (805)
Q Consensus 511 gi~~~~~ki~VIpnGvD 527 (805)
+ ..+..+||+|+|
T Consensus 173 --~--~~~s~~IaYGad 185 (185)
T PF09314_consen 173 --G--RKKSTFIAYGAD 185 (185)
T ss_pred --C--CCCcEEecCCCC
Confidence 1 368889999987
No 111
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.90 E-value=1.2e-06 Score=98.93 Aligned_cols=111 Identities=21% Similarity=0.269 Sum_probs=73.3
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEEC
Q 003661 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIVNGKSGYHID 711 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG----~~EiI~dg~~G~li~ 711 (805)
+.++|.+.+ .++..++ +. .+|++|..+ |. .|+.||+++|+|+|+....+ ..+.+.+...|..++
T Consensus 273 ~~~~v~~~~----~~p~~~l---l~-~~~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLEI---LK-KADAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHHH---Hh-hCCEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457899888 5555554 45 599999753 22 48999999999999964443 233445556777775
Q ss_pred CC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003661 712 PY--HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 712 p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~L 763 (805)
.. ++++++++|.+++ .|+++++++.+- .+.+...-.-+..++.+.++
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM-RAEIREAGGARRAADEIEGF 389 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHh
Confidence 43 5688888886665 898877666443 33333445566666666554
No 112
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=98.89 E-value=5.1e-09 Score=110.94 Aligned_cols=185 Identities=16% Similarity=0.145 Sum_probs=100.8
Q ss_pred eEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCCcc-ccceeee--
Q 003661 278 NVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTC-GQRLEKV-- 354 (805)
Q Consensus 278 rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~-~~~~e~i-- 354 (805)
||+++|.-..| --.+||...++. .|+++|+++||+|. |+++.+........ ...+...
T Consensus 1 kIl~vt~E~~P-------~~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAP-------FAKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTT-------TB-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCc-------ccccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 78999887653 237899999999 67777899999999 99887632111100 0000000
Q ss_pred --------c----------CccCeEEEEeccCcCCcccccccccccch-------h-hHHHH--HHHHHHHHHHHcCCCc
Q 003661 355 --------Y----------GTKYSDILRVPFRTEKGVVRKWISRFEVW-------P-YLETY--TEDVAVEIAKELQGKP 406 (805)
Q Consensus 355 --------~----------~~~~v~Ilrvp~~~~~~~l~~~isr~~i~-------~-~l~~f--~~~~~~~i~~~~~~kP 406 (805)
. ..+++.++-+.... + ..+..++ + -.++| ...+..++...++.+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~---~----f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE---Y----FDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH---H----HGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh---h----ccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 0 01244444332211 0 1111122 1 12222 2334444444455689
Q ss_pred eEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCCcccC-CCCh-----hhhhh--cccccccchhhhHhHHHhh
Q 003661 407 DLIIGNYSDGNIVASLLAHKL-------GVTQCTIAHALEKTKY-PDSD-----IYWKN--LDDKYHFSCQFTADLIAMN 471 (805)
Q Consensus 407 DIIh~h~~~~~lva~llar~l-------gip~v~t~H~l~~~k~-~~s~-----~~~~~--~~~~y~~~~~~~~e~~a~~ 471 (805)
||||||.|.+++++.+++... ++|.|+|+|++..... +... +.+.. ....+.+...+...+.++.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999998888765 5999999999754431 1111 11111 1112223334445667899
Q ss_pred cCCEEEecCHHHHhhcc
Q 003661 472 HTDFIITSTFQEIAGSK 488 (805)
Q Consensus 472 ~AD~IIt~S~~~~~~~~ 488 (805)
.||.|+|+|+..++.+.
T Consensus 215 ~AD~v~TVS~~Ya~Ei~ 231 (245)
T PF08323_consen 215 YADKVTTVSPTYAREIQ 231 (245)
T ss_dssp HSSEEEESSHHHHHHTT
T ss_pred hcCEeeeCCHHHHHHHh
Confidence 99999999998877443
No 113
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.82 E-value=1.4e-06 Score=98.79 Aligned_cols=271 Identities=15% Similarity=0.142 Sum_probs=152.9
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEE-EecCCCcccCCCChhhhhhcccccccch-h----hhHhHHHhhcCCEE
Q 003661 403 QGKPDLIIGNYSDGNIVASLLAHKLGVTQCT-IAHALEKTKYPDSDIYWKNLDDKYHFSC-Q----FTADLIAMNHTDFI 476 (805)
Q Consensus 403 ~~kPDIIh~h~~~~~lva~llar~lgip~v~-t~H~l~~~k~~~s~~~~~~~~~~y~~~~-~----~~~e~~a~~~AD~I 476 (805)
.++||+|.+. |++++.++|+..|+|+++ -.|-.. .+..+...| ...+.|+-.. . +..-++.-+.|+.|
T Consensus 91 ~~~p~~v~~~---Gg~v~~~aA~~~~~p~~~~~~~esn--~~~~~~~~~-~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v 164 (396)
T TIGR03492 91 AKKGDLIVAV---GDIVPLLFAWLSGKPYAFVGTAKSD--YYWESGPRR-SPSDEYHRLEGSLYLPWERWLMRSRRCLAV 164 (396)
T ss_pred hhcCCEEEEE---CcHHHHHHHHHcCCCceEEEeeccc--eeecCCCCC-ccchhhhccCCCccCHHHHHHhhchhhCEE
Confidence 3489999987 456677788889999876 234211 111111111 1111111000 0 00123455789999
Q ss_pred EecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchh
Q 003661 477 ITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDV 556 (805)
Q Consensus 477 It~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~ 556 (805)
.+..+...+..++ . ..++.++.|.+=...... ..
T Consensus 165 ~~~~~~t~~~l~~--------------------~-----g~k~~~vGnPv~d~l~~~-~~-------------------- 198 (396)
T TIGR03492 165 FVRDRLTARDLRR--------------------Q-----GVRASYLGNPMMDGLEPP-ER-------------------- 198 (396)
T ss_pred eCCCHHHHHHHHH--------------------C-----CCeEEEeCcCHHhcCccc-cc--------------------
Confidence 8888665542111 1 236667777542221110 00
Q ss_pred hhhhhhccccCCCCcEE-EEEeec-c-CCCCHHHHHHHHHHhHccCCCeEEEEEe-CCCCCCCccHHHHHHHHHHHHHHH
Q 003661 557 ENKEHLCVLKDRNKPIL-FTMARL-D-RVKNLTGLVEWYGKNAKLRELVNLVVVG-GDRRKESKDLEEQAEMKKMYSLID 632 (805)
Q Consensus 557 ~~~~~~G~l~~~~k~vI-l~vGRL-~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG-~g~~~~~~d~ee~~e~~~l~~li~ 632 (805)
.++ ++++++| +..|.- . ..+++..+++++..+.+. +++.+++.- ++.+ .+.+.+...
T Consensus 199 -----~~l--~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~-----------~~~~~~~l~ 259 (396)
T TIGR03492 199 -----KPL--LTGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS-----------LEKLQAILE 259 (396)
T ss_pred -----ccc--CCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC-----------HHHHHHHHH
Confidence 022 3344444 444433 2 346888999999999765 678887765 3332 234444444
Q ss_pred HcCCC--------------CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc-
Q 003661 633 QYKLN--------------GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP- 697 (805)
Q Consensus 633 ~l~L~--------------~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~- 697 (805)
+.+.. +++.+.. ...++..+++. +|++|..| |.+..|++++|+|+|.....+.
T Consensus 260 ~~g~~~~~~~~~~~~~~~~~~~~v~~------~~~~~~~~l~~-ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q 327 (396)
T TIGR03492 260 DLGWQLEGSSEDQTSLFQKGTLEVLL------GRGAFAEILHW-ADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQ 327 (396)
T ss_pred hcCceecCCccccchhhccCceEEEe------chHhHHHHHHh-CCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCH
Confidence 44432 2245543 13467888884 99999874 5566999999999999864443
Q ss_pred --cccccc-----CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003661 698 --AEIIVN-----GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 698 --~EiI~d-----g~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll 761 (805)
..+.+. | .+..+...+++.+++++.+++ .|++.+++|.++++++......-+.+++.+.
T Consensus 328 ~na~~~~~~~~l~g-~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~ 393 (396)
T TIGR03492 328 FTYGFAEAQSRLLG-GSVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQERMGPPGASARIAESIL 393 (396)
T ss_pred HHHHHHHhhHhhcC-CEEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 122222 3 344455567888888886655 8999998888655555434444555554443
No 114
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.76 E-value=8.8e-07 Score=96.73 Aligned_cols=116 Identities=17% Similarity=0.168 Sum_probs=79.5
Q ss_pred CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCC
Q 003661 568 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 568 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~ 647 (805)
+.+.+++++|..+.. .++++++.+ ++..++++|..... ...++|++.++
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~~---------------------~~~~ni~~~~~-- 239 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAAD---------------------PRPGNIHVRPF-- 239 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCccc---------------------ccCCCEEEeec--
Confidence 356688999987655 666776664 57889999766310 01578999863
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcH-HHHHHHHcCCcEEEcCcccccc------ccccCceEEEECCC--CHHHH
Q 003661 648 NRVRNGELYRYICDTKGAFVQPALYEAFGL-TVVEAMTCGLPTFATCKGGPAE------IIVNGKSGYHIDPY--HGEQA 718 (805)
Q Consensus 648 ~~v~~~el~~~la~aaDvfV~PS~~E~fGl-tvlEAMA~GlPVVat~~GG~~E------iI~dg~~G~li~p~--d~e~l 718 (805)
...++.++|+. ||++|.- -|. |+.||+++|+|++.-...+..| .++.-..|..+++. +++.+
T Consensus 240 ---~~~~~~~~m~~-ad~vIs~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 240 ---STPDFAELMAA-ADLVISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred ---ChHHHHHHHHh-CCEEEEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 23578899995 9999976 344 5999999999999987655433 33444566665533 46777
Q ss_pred HHHHH
Q 003661 719 AEILV 723 (805)
Q Consensus 719 A~aI~ 723 (805)
++.|.
T Consensus 311 ~~~l~ 315 (318)
T PF13528_consen 311 AEFLE 315 (318)
T ss_pred HHHHh
Confidence 77663
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.73 E-value=1.6e-06 Score=97.28 Aligned_cols=266 Identities=17% Similarity=0.203 Sum_probs=151.0
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDIIh~h~~~-~~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+|.++... ..+.++++|..+++|+++.--++. +. + ..+...+ ...-+-|+..++++..
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~r-s~----~----~~eE~~r--------~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEV-TE----G----AIDESIR--------HAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCcc-CC----C----CchHHHH--------HHHHHHHhhccCCCHH
Confidence 479999998854 477889999999999874433321 11 0 0111111 1223456777788876
Q ss_pred HHhhccccccccccccccccccceeeecCCCCCCCcEEEecC-CccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 561 (805)
..+... .-|++ +.++.++.| ++|.-....... ..+..+.
T Consensus 155 ~~~~L~--------------------~eg~~--~~~i~~tG~~~iD~l~~~~~~~------------------~~~~~~~ 194 (365)
T TIGR03568 155 YRQRVI--------------------QMGED--PDRVFNVGSPGLDNILSLDLLS------------------KEELEEK 194 (365)
T ss_pred HHHHHH--------------------HcCCC--CCcEEEECCcHHHHHHhhhccC------------------HHHHHHH
Confidence 655221 12443 556766644 565432211111 1223345
Q ss_pred hccccCCCCcE-EEEEeecc--CCCCHHHHHHHHHHhHccCCCeEEEEEeC--CCCCCCccHHHHHHHHHHHHHHHHcCC
Q 003661 562 LCVLKDRNKPI-LFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGG--DRRKESKDLEEQAEMKKMYSLIDQYKL 636 (805)
Q Consensus 562 ~G~l~~~~k~v-Il~vGRL~--~~Kgl~~LieA~~~l~~~~~~v~LvIVG~--g~~~~~~d~ee~~e~~~l~~li~~l~L 636 (805)
+|+ ++++++ ++.+-+-. .....+.+.+.+..+.+...++ +++.. ++.. ....+.+.++...
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p~~-------~~i~~~i~~~~~~--- 260 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADAGS-------RIINEAIEEYVNE--- 260 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCCCc-------hHHHHHHHHHhcC---
Confidence 676 434344 44554432 3333344444444444433334 44432 2221 0112233333211
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003661 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 716 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e 716 (805)
.++|++++ ..+..++..+++. ++++|.-|. | .+.||.++|+|||+ .|.-+|.++.|.+.+++ +.|++
T Consensus 261 ~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~ 327 (365)
T TIGR03568 261 HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDKE 327 (365)
T ss_pred CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCHH
Confidence 46799999 7888999999996 999985432 3 33899999999995 45678888888888888 55899
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003661 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTL 763 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~L 763 (805)
++.+++.++ .+++.++.+ ......|.....++++.++
T Consensus 328 ~I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 328 EIVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 999988663 344433332 1122456666666666553
No 116
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.56 E-value=7.7e-05 Score=83.10 Aligned_cols=156 Identities=17% Similarity=0.157 Sum_probs=115.0
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC-----------
Q 003661 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG----------- 638 (805)
Q Consensus 570 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~----------- 638 (805)
+++++..+. ...--+.+++++..+++.+|++.+++|=-.|+ -.+..+++++..|+.-
T Consensus 231 r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE----------Rf~~v~~l~~~~gl~~~~rS~~~~~~~ 298 (419)
T COG1519 231 RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE----------RFKAVENLLKRKGLSVTRRSQGDPPFS 298 (419)
T ss_pred CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh----------hHHHHHHHHHHcCCeEEeecCCCCCCC
Confidence 788888887 33334668899999999999999999987764 3567788888887731
Q ss_pred -cEEEecCCCCcCChHHHHHHHHccCcE-EEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCceEEEECC
Q 003661 639 -QFRWISSQMNRVRNGELYRYICDTKGA-FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDP 712 (805)
Q Consensus 639 -~V~flG~~~~~v~~~el~~~la~aaDv-fV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~dg~~G~li~p 712 (805)
.=.++| | ..+||..+|.- +|+ ||--|+.+--|--++|+.++|+|||.- +...+.+-+...+.|+.++
T Consensus 299 ~tdV~l~---D--tmGEL~l~y~~-adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~- 371 (419)
T COG1519 299 DTDVLLG---D--TMGELGLLYGI-ADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVE- 371 (419)
T ss_pred CCcEEEE---e--cHhHHHHHHhh-ccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEEC-
Confidence 112333 2 46899999984 775 555677766677899999999999985 4444445555556788886
Q ss_pred CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q 003661 713 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE 749 (805)
Q Consensus 713 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~ 749 (805)
|.+.+++++ +.+.+|++.+++|++++...+.+
T Consensus 372 -~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 372 -DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred -CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHH
Confidence 566666666 44558899999999999999854
No 117
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.54 E-value=1.5e-06 Score=82.95 Aligned_cols=123 Identities=22% Similarity=0.230 Sum_probs=77.1
Q ss_pred HHHHHHHHCCCceeeceeEEecCCCCCCCCccccceeeecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHHH
Q 003661 316 EMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVA 395 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~ 395 (805)
.+++.|+++|++|+ ++|..... +......++.+.+++.... ..++++. +. ...
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 66777899999999 98873221 1112234678888764321 1344442 21 232
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcC-CcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcC
Q 003661 396 VEIAKELQGKPDLIIGNYSDG-NIVASLLAHKLG-VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHT 473 (805)
Q Consensus 396 ~~i~~~~~~kPDIIh~h~~~~-~lva~llar~lg-ip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~A 473 (805)
.+++ +.+||+||+|...+ ++++.++++..+ +|++.+.|+........ ..+ +.. ...+.+++.|
T Consensus 68 -k~ik--~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~~~---~~~-------~~~--~~~~~~~k~~ 132 (139)
T PF13477_consen 68 -KIIK--KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNSSK---KKK-------LKK--FIIKFAFKRA 132 (139)
T ss_pred -HHhc--cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecCCc---hHH-------HHH--HHHHHHHHhC
Confidence 2232 24799999999886 788888889998 99999999864322110 000 011 1345688999
Q ss_pred CEEEecC
Q 003661 474 DFIITST 480 (805)
Q Consensus 474 D~IIt~S 480 (805)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999865
No 118
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.45 E-value=2.1e-05 Score=87.67 Aligned_cols=268 Identities=18% Similarity=0.176 Sum_probs=142.8
Q ss_pred CceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHHH
Q 003661 405 KPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQE 483 (805)
Q Consensus 405 kPDIIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~~ 483 (805)
+||+|..+.-.. .+.++++|..+++|+++.--++...... -...+...+ ...-+-|+.-+++|...
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~-----~g~~de~~R--------~~i~~la~lhf~~t~~~ 133 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRT-----EGMPDEINR--------HAIDKLAHLHFAPTEEA 133 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-TT-----SSTTHHHHH--------HHHHHH-SEEEESSHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCccccC-----CCCchhhhh--------hhhhhhhhhhccCCHHH
Confidence 799999887665 6788999999999966554443221110 001111111 12345789999999887
Q ss_pred HhhccccccccccccccccccceeeecCCCCCCCcEEEecC-CccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh-
Q 003661 484 IAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH- 561 (805)
Q Consensus 484 ~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~- 561 (805)
.+.+.+ .|++ +.++.++.| ++|.- ........+.
T Consensus 134 ~~~L~~--------------------~G~~--~~rI~~vG~~~~D~l----------------------~~~~~~~~~~~ 169 (346)
T PF02350_consen 134 RERLLQ--------------------EGEP--PERIFVVGNPGIDAL----------------------LQNKEEIEEKY 169 (346)
T ss_dssp HHHHHH--------------------TT----GGGEEE---HHHHHH----------------------HHHHHTTCC-H
T ss_pred HHHHHh--------------------cCCC--CCeEEEEChHHHHHH----------------------HHhHHHHhhhh
Confidence 663322 2555 678888765 33321 0000011111
Q ss_pred --hccccCCCCc-EEEEEeeccC---CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 003661 562 --LCVLKDRNKP-ILFTMARLDR---VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 562 --~G~l~~~~k~-vIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~ 635 (805)
.++..+..++ ++++.=|... ......+.+++..+.+. +++++++.....+ .....+.+...++
T Consensus 170 ~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p---------~~~~~i~~~l~~~- 238 (346)
T PF02350_consen 170 KNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP---------RGSDIIIEKLKKY- 238 (346)
T ss_dssp HHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H---------HHHHHHHHHHTT--
T ss_pred hhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc---------hHHHHHHHHhccc-
Confidence 1221123344 4445534332 24467788888888776 7899999887543 2234444455544
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHH-HHHHcCCcEEEc-CccccccccccCceEEEECCC
Q 003661 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVV-EAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPY 713 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvl-EAMA~GlPVVat-~~GG~~EiI~dg~~G~li~p~ 713 (805)
++|+++. .....+++.+++. +++.|-= .| .+. ||.++|+|||.- +.|--.+-+..+.+-+ +. .
T Consensus 239 --~~v~~~~----~l~~~~~l~ll~~-a~~vvgd-----Ss-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~ 303 (346)
T PF02350_consen 239 --DNVRLIE----PLGYEEYLSLLKN-ADLVVGD-----SS-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-T 303 (346)
T ss_dssp --TTEEEE--------HHHHHHHHHH-ESEEEES-----SH-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-S
T ss_pred --CCEEEEC----CCCHHHHHHHHhc-ceEEEEc-----Cc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-C
Confidence 3899998 7788999999996 8888754 35 777 999999999997 5555566666665555 75 6
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003661 714 HGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLT 764 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly 764 (805)
|.+++.++|.+++ .+++.+.++.. ....|.=...++++.++.
T Consensus 304 ~~~~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 304 DPEAIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp SHHHHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHHH
T ss_pred CHHHHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHhh
Confidence 8999999997766 45444444321 123455455555555543
No 119
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.41 E-value=4.6e-05 Score=83.93 Aligned_cols=69 Identities=13% Similarity=0.049 Sum_probs=51.4
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCceEEEE
Q 003661 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE------IIVNGKSGYHI 710 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~E------iI~dg~~G~li 710 (805)
.+++.+.++ .+ .++..+|+. +|++|.-+- ..++.||+++|+|++.....+..| .+++...|..+
T Consensus 228 ~~~v~~~~~----~~-~~~~~~l~~-ad~vI~~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRI----TT-DNFKELIKN-AELVITHGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEEC----Ch-HHHHHHHHh-CCEEEECCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 578998873 32 578888885 999998753 247999999999999987765434 45555678888
Q ss_pred CCCCH
Q 003661 711 DPYHG 715 (805)
Q Consensus 711 ~p~d~ 715 (805)
+..+.
T Consensus 298 ~~~~~ 302 (321)
T TIGR00661 298 EYKEL 302 (321)
T ss_pred ChhhH
Confidence 76665
No 120
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.37 E-value=0.00027 Score=82.82 Aligned_cols=154 Identities=13% Similarity=0.002 Sum_probs=96.5
Q ss_pred CcEEEEEeeccCC-----CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003661 570 KPILFTMARLDRV-----KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 570 k~vIl~vGRL~~~-----Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG 644 (805)
.+++++.|..... +-+..+++|++++ + .++++..++... . .++++||.+.+
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~~-----------~--------~~~p~Nv~i~~ 352 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEVE-----------A--------INLPANVLTQK 352 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCcC-----------c--------ccCCCceEEec
Confidence 4778899987532 2345566666554 3 466666554220 0 24578999988
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccCceEEEECCC--CHHHH
Q 003661 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVNGKSGYHIDPY--HGEQA 718 (805)
Q Consensus 645 ~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~----GG~~EiI~dg~~G~li~p~--d~e~l 718 (805)
+++..+++.. . .+++||.- |-..++.||+.+|+|+|+... ...+..++.-+.|..++.. +.+++
T Consensus 353 ----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l 422 (507)
T PHA03392 353 ----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQL 422 (507)
T ss_pred ----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHH
Confidence 6777776631 1 37888863 334589999999999999633 3345555556678888754 45777
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003661 719 AEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 719 A~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll 761 (805)
.++|.+++ +||+++++..+-+.....+..+-..-+-.+.
T Consensus 423 ~~ai~~vl----~~~~y~~~a~~ls~~~~~~p~~~~~~av~~i 461 (507)
T PHA03392 423 VLAIVDVI----ENPKYRKNLKELRHLIRHQPMTPLHKAIWYT 461 (507)
T ss_pred HHHHHHHh----CCHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 77776555 8998887766555554333344433333333
No 121
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.32 E-value=1.5e-05 Score=91.00 Aligned_cols=184 Identities=13% Similarity=0.082 Sum_probs=120.2
Q ss_pred hhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC
Q 003661 557 ENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL 636 (805)
Q Consensus 557 ~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L 636 (805)
..|+.+|+ +.+..++++..++ .|=-...++++.++.+.-|+.+|++...... ..+.+++.+.+.|+
T Consensus 274 ~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~----------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 274 TTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS----------GEARLRRRFAAHGV 339 (468)
T ss_dssp EETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT----------HHHHHHHHHHHTTS
T ss_pred cCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH----------HHHHHHHHHHHcCC
Confidence 34788999 6777777777766 4566889999999999999999999875432 13567888889999
Q ss_pred C-CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc-----ccc-cCceEEE
Q 003661 637 N-GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE-----IIV-NGKSGYH 709 (805)
Q Consensus 637 ~-~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~E-----iI~-dg~~G~l 709 (805)
. ++|.|.+ ..+..+-.+.+.. +|+++=|-. -+-|.|.+||+.+|+|||+-....... ++. =|-.-++
T Consensus 340 ~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p-~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElI 413 (468)
T PF13844_consen 340 DPDRIIFSP----VAPREEHLRRYQL-ADICLDTFP-YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELI 413 (468)
T ss_dssp -GGGEEEEE-------HHHHHHHGGG--SEEE--SS-S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB
T ss_pred ChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCC-CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhc
Confidence 6 7899998 5566777777775 999998743 344789999999999999853322222 111 1222233
Q ss_pred ECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q 003661 710 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE--KYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 710 i~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~--~ysw~~~a~~ll~Ly~~ 766 (805)
.. |.+++.+.-.++- .|++.++++.+.-++...+ -|+-..+++.+++.|+.
T Consensus 414 A~--s~~eYv~~Av~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 414 AD--SEEEYVEIAVRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp -S--SHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred CC--CHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 33 7888877775544 8999999999998887644 39999999999999875
No 122
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.30 E-value=5.7e-05 Score=81.68 Aligned_cols=97 Identities=14% Similarity=0.250 Sum_probs=69.8
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEE-EEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Q 003661 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNL-VVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 570 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~L-vIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~ 648 (805)
+.+++++|..++.+....+++++.++. +++++ +++|.+... .+++++.++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~--- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNPN----------LDELKKFAKEY---PNIILFID--- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeC---
Confidence 467999999998776667888887643 34444 355655321 24566666543 47888873
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003661 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK 694 (805)
Q Consensus 649 ~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~ 694 (805)
..++.++|+. +|++|.+ .|.|+.|++++|+|+|+...
T Consensus 232 ---~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ---VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ---HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3468899995 9999985 67999999999999998654
No 123
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.06 E-value=0.00093 Score=74.00 Aligned_cols=63 Identities=13% Similarity=0.139 Sum_probs=44.4
Q ss_pred HHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHHHH
Q 003661 655 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHGEQAAEILVDF 725 (805)
Q Consensus 655 l~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~G---G~~EiI~dg~~G~li~p~d~e~lA~aI~~~ 725 (805)
...+++- ||++|-- -|....||...|+|+|.+..| +.-+.+. +.|+++...|++++.+.+.+.
T Consensus 242 ~~~Ll~~-a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 242 GLDLLYY-ADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHHHHh-cCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHh
Confidence 3456664 8899953 566789999999999987543 2323332 347888888999988866543
No 124
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.98 E-value=0.0084 Score=69.58 Aligned_cols=127 Identities=13% Similarity=0.157 Sum_probs=72.2
Q ss_pred CCCcEEEEEeeccCC--CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecC
Q 003661 568 RNKPILFTMARLDRV--KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 645 (805)
Q Consensus 568 ~~k~vIl~vGRL~~~--Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~ 645 (805)
+...+.++.|..... +-+..++++++.. +.+++++..+.. ..+.+.. .+++...+
T Consensus 273 ~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~------------~~~~~~~-----~~~~~v~~- 329 (459)
T PLN02448 273 EGSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA------------SRLKEIC-----GDMGLVVP- 329 (459)
T ss_pred CCceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch------------hhHhHhc-----cCCEEEec-
Confidence 345677888876431 2234444444432 457777655421 1111111 24666666
Q ss_pred CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccC-ceEEEECC-------C
Q 003661 646 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNG-KSGYHIDP-------Y 713 (805)
Q Consensus 646 ~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~G----G~~EiI~dg-~~G~li~p-------~ 713 (805)
+++..+++.. . +.++||.- +--++++||+++|+|+|+-... ..+..+.+. +.|+-+.. -
T Consensus 330 ---w~pQ~~iL~h-~-~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~ 400 (459)
T PLN02448 330 ---WCDQLKVLCH-S-SVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLV 400 (459)
T ss_pred ---cCCHHHHhcc-C-ccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcC
Confidence 6777777762 1 13346642 2235899999999999996443 344445442 45665531 2
Q ss_pred CHHHHHHHHHHHH
Q 003661 714 HGEQAAEILVDFF 726 (805)
Q Consensus 714 d~e~lA~aI~~~l 726 (805)
+.+++++++.+++
T Consensus 401 ~~~~l~~av~~vl 413 (459)
T PLN02448 401 GREEIAELVKRFM 413 (459)
T ss_pred cHHHHHHHHHHHh
Confidence 5678888887766
No 125
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.95 E-value=0.00052 Score=78.26 Aligned_cols=158 Identities=18% Similarity=0.139 Sum_probs=103.6
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Q 003661 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 569 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~ 648 (805)
.+++.++.|..... .+.+-.+...+.+. ++++++..++.+. ..-++++|+...+
T Consensus 237 ~~~vyvslGt~~~~--~~l~~~~~~a~~~l--~~~vi~~~~~~~~------------------~~~~~p~n~~v~~---- 290 (406)
T COG1819 237 RPIVYVSLGTVGNA--VELLAIVLEALADL--DVRVIVSLGGARD------------------TLVNVPDNVIVAD---- 290 (406)
T ss_pred CCeEEEEcCCcccH--HHHHHHHHHHHhcC--CcEEEEecccccc------------------ccccCCCceEEec----
Confidence 44556677776544 33333333333332 5677777755220 1235678999988
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEEC--CCCHHHHHHHH
Q 003661 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVNGKSGYHID--PYHGEQAAEIL 722 (805)
Q Consensus 649 ~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~G----G~~EiI~dg~~G~li~--p~d~e~lA~aI 722 (805)
.++..++.. .+|++|+. -|+| ++.||+..|+|+|+-..+ ..++-+++-..|.... ..+.+.++++|
T Consensus 291 ~~p~~~~l~----~ad~vI~h---GG~g-tt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av 362 (406)
T COG1819 291 YVPQLELLP----RADAVIHH---GGAG-TTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAV 362 (406)
T ss_pred CCCHHHHhh----hcCEEEec---CCcc-hHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHH
Confidence 677777666 69999987 4444 899999999999996443 3456667777888776 57889999999
Q ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 723 VDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 723 ~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
.+++ .|+..++...+.... ..+.-.-+..++.+.++.+
T Consensus 363 ~~vL----~~~~~~~~~~~~~~~-~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 363 NEVL----ADDSYRRAAERLAEE-FKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHHh----cCHHHHHHHHHHHHH-hhhcccHHHHHHHHHHHHh
Confidence 7666 888876665554443 3455665656666666543
No 126
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.73 E-value=0.0054 Score=68.95 Aligned_cols=241 Identities=20% Similarity=0.207 Sum_probs=136.9
Q ss_pred CCCceEEEE-cCCCchHHHHHHHHHcCCc--EEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEec
Q 003661 403 QGKPDLIIG-NYSDGNIVASLLAHKLGVT--QCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITS 479 (805)
Q Consensus 403 ~~kPDIIh~-h~~~~~lva~llar~lgip--~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 479 (805)
..+||+++. -+++.|+-.+..+++.|++ +++-+- + .-+.|+... -...-+..|.++|.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~---P-----qvWAWr~~R-----------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS---P-----QVWAWRPGR-----------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC---C-----ceeeeCccH-----------HHHHHHHHhheeEC
Confidence 358999886 5555688666677778877 543222 1 112333211 11234577988888
Q ss_pred CHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCC-ccCCCCCCCcHHHHhhhcCchhhHHhhcchhhh
Q 003661 480 TFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 480 S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 558 (805)
=+-|.+- |. .+|+ +...|.|. +|.-...+... ..
T Consensus 141 fPFE~~~-------y~-------------~~g~-----~~~~VGHPl~d~~~~~~~~~--------------------~~ 175 (373)
T PF02684_consen 141 FPFEPEF-------YK-------------KHGV-----PVTYVGHPLLDEVKPEPDRA--------------------EA 175 (373)
T ss_pred CcccHHH-------Hh-------------ccCC-----CeEEECCcchhhhccCCCHH--------------------HH
Confidence 7766551 11 1222 34555443 33322111111 11
Q ss_pred hhhhccccCCCCcEE-EEEe-eccC-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 003661 559 KEHLCVLKDRNKPIL-FTMA-RLDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 559 ~~~~G~l~~~~k~vI-l~vG-RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~ 635 (805)
++.+ + ++++++| +..| |-.. .+.+..+++++.++.+.+|++++++...... ..+.+.+.....+
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~----------~~~~i~~~~~~~~ 242 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV----------HEELIEEILAEYP 242 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH----------HHHHHHHHHHhhC
Confidence 2233 3 5566654 5555 3333 3466888999999999999999998875521 1223445555555
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-Ccccccc---------------
Q 003661 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAE--------------- 699 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat-~~GG~~E--------------- 699 (805)
.+-.+.... ++-+..|+. +|+.+.. .|.+.+|++.+|+|.|+. +.+...-
T Consensus 243 ~~~~~~~~~--------~~~~~~m~~-ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~ 308 (373)
T PF02684_consen 243 PDVSIVIIE--------GESYDAMAA-ADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLP 308 (373)
T ss_pred CCCeEEEcC--------CchHHHHHh-Ccchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeech
Confidence 443444432 356778884 8888766 599999999999999985 3332222
Q ss_pred -ccccC--ceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003661 700 -IIVNG--KSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDK 738 (805)
Q Consensus 700 -iI~dg--~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ 738 (805)
++-+. ..=++-+.-+++.+++++..++ .|++.++.
T Consensus 309 Niia~~~v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~~ 346 (373)
T PF02684_consen 309 NIIAGREVVPELIQEDATPENIAAELLELL----ENPEKRKK 346 (373)
T ss_pred hhhcCCCcchhhhcccCCHHHHHHHHHHHh----cCHHHHHH
Confidence 22111 0112223447888888886555 78776433
No 127
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.70 E-value=0.00013 Score=80.59 Aligned_cols=99 Identities=21% Similarity=0.306 Sum_probs=64.4
Q ss_pred cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccc----cC-ceEEEE-CC--CCHHHHHHHHHHHHHHhhCCH
Q 003661 662 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV----NG-KSGYHI-DP--YHGEQAAEILVDFFEKCKADP 733 (805)
Q Consensus 662 aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~----dg-~~G~li-~p--~d~e~lA~aI~~~l~~l~~dp 733 (805)
.|.+.|+||+||++|.|..|--.+|.|-|.|+..|..-+++ +. .-|+.+ |- ..+++-.+.+.+++... ...
T Consensus 500 GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F-~~q 578 (692)
T KOG3742|consen 500 GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEF-CKQ 578 (692)
T ss_pred cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHH-HHH
Confidence 69999999999999999999999999999999988755443 32 246644 31 23455555555554322 234
Q ss_pred HHHHHHHHHHH-HHHHHhCCHHHHHHHHH
Q 003661 734 SYWDKISLGGL-KRIEEKYTWKIYSQRLL 761 (805)
Q Consensus 734 ~~~~~ms~~ar-~~v~~~ysw~~~a~~ll 761 (805)
.+|+++.++.+ ++...-.+|+.+-.-|.
T Consensus 579 sRRQRIiqRNrtErLSdLLDWk~lG~~Y~ 607 (692)
T KOG3742|consen 579 SRRQRIIQRNRTERLSDLLDWKYLGRYYR 607 (692)
T ss_pred HHHHHHHHhcchhhHHHHHhHHHHhHHHH
Confidence 45555555433 44445567776554443
No 128
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.69 E-value=0.00092 Score=76.73 Aligned_cols=185 Identities=14% Similarity=0.193 Sum_probs=129.3
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC-
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN- 637 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~- 637 (805)
|...|+ +++..++++.++. .|-...+...+.++.+.-|+..|++-|+|++. .....+++++++.|+.
T Consensus 421 R~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~--------~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 421 RAQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDDA--------EINARLRDLAEREGVDS 488 (620)
T ss_pred hhhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCcH--------HHHHHHHHHHHHcCCCh
Confidence 355788 5666666555544 56566777777777777899999999998652 4567899999999996
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-------Ccccccccccc-CceEEE
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-------CKGGPAEIIVN-GKSGYH 709 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat-------~~GG~~EiI~d-g~~G~l 709 (805)
++++|.+ +.++++....+.- +|+++=+.-|-| +.|.+||+.+|+||++- ..|+ .++.. |..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~i-ADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYGI-ADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhch-hheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhh
Confidence 6899999 6667777777774 999987655443 56899999999999973 3332 13322 333344
Q ss_pred ECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHhchhh
Q 003661 710 IDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEE--KYTWKIYSQRLLTLTGVYGFWK 771 (805)
Q Consensus 710 i~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~--~ysw~~~a~~ll~Ly~~~~~w~ 771 (805)
.+ +.++..++-.. +-.|...+++....-.+.... -|+.+.+++++.++|. |.|.
T Consensus 561 A~--s~~dYV~~av~----~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~--~M~~ 616 (620)
T COG3914 561 AD--SRADYVEKAVA----FGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYW--GMWS 616 (620)
T ss_pred cC--CHHHHHHHHHH----hcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHH--HHHH
Confidence 44 45555554433 337887888777665555433 5899999999999984 3554
No 129
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.60 E-value=0.032 Score=62.12 Aligned_cols=274 Identities=16% Similarity=0.211 Sum_probs=164.3
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDIIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
.+||+|..|.-.. .++++++|...+||+++.--|+-.. +.+|.. .+. -...-.-|+.-++.|..
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~-----~~~~PE---E~N-------R~l~~~~S~~hfapte~ 155 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTG-----DLYFPE---EIN-------RRLTSHLSDLHFAPTEI 155 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccC-----CCCCcH---HHH-------HHHHHHhhhhhcCChHH
Confidence 4799999887664 5677999999999998776664221 111211 000 01233456777788876
Q ss_pred HHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCc-cCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhh
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEH 561 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 561 (805)
..+. ....|++ ..++.|+.|-+ |.-.+. ..+. -........
T Consensus 156 ar~n--------------------Ll~EG~~--~~~IfvtGnt~iDal~~~-----~~~~-----------~~~~~~~~~ 197 (383)
T COG0381 156 ARKN--------------------LLREGVP--EKRIFVTGNTVIDALLNT-----RDRV-----------LEDSKILAK 197 (383)
T ss_pred HHHH--------------------HHHcCCC--ccceEEeCChHHHHHHHH-----Hhhh-----------ccchhhHHh
Confidence 6552 2223554 55788888743 211000 0000 000000011
Q ss_pred hccccCCC-CcEEEEEeeccCC-CCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHH-HHcCCCC
Q 003661 562 LCVLKDRN-KPILFTMARLDRV-KNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLI-DQYKLNG 638 (805)
Q Consensus 562 ~G~l~~~~-k~vIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li-~~l~L~~ 638 (805)
+ + .+.+ +.++++.-|-.-. +++..+++++.++.++++++.++.--... ..+++.. ..++-.+
T Consensus 198 ~-~-~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~-------------~~v~e~~~~~L~~~~ 262 (383)
T COG0381 198 G-L-DDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR-------------PRVRELVLKRLKNVE 262 (383)
T ss_pred h-h-ccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC-------------hhhhHHHHHHhCCCC
Confidence 1 1 1333 4555566565543 99999999999999988777766544321 2233333 5556566
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHH
Q 003661 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK-GGPAEIIVNGKSGYHIDPYHGEQ 717 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~-GG~~EiI~dg~~G~li~p~d~e~ 717 (805)
+|.++. ++...+...++.. | .++++ ..|-..=||-..|+||++-+. -.-+|-++.| +-.++. .|.+.
T Consensus 263 ~v~li~----pl~~~~f~~L~~~-a-~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~~~ 330 (383)
T COG0381 263 RVKLID----PLGYLDFHNLMKN-A-FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDEEN 330 (383)
T ss_pred cEEEeC----CcchHHHHHHHHh-c-eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccHHH
Confidence 799997 7778888888886 5 33332 236677899999999999633 3456666544 445564 46777
Q ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 718 AAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 718 lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+.+++..++ ++++..++|+.. ...|.=...++++.++...
T Consensus 331 i~~~~~~ll----~~~~~~~~m~~~-----~npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 331 ILDAATELL----EDEEFYERMSNA-----KNPYGDGNASERIVEILLN 370 (383)
T ss_pred HHHHHHHHh----hChHHHHHHhcc-----cCCCcCcchHHHHHHHHHH
Confidence 777775544 898888877654 3456555566666666554
No 130
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.50 E-value=0.0096 Score=66.09 Aligned_cols=199 Identities=18% Similarity=0.164 Sum_probs=115.5
Q ss_pred CCCceEEEEcCC-CchHHHHHHHHHcC--CcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEec
Q 003661 403 QGKPDLIIGNYS-DGNIVASLLAHKLG--VTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITS 479 (805)
Q Consensus 403 ~~kPDIIh~h~~-~~~lva~llar~lg--ip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~ 479 (805)
..+||++++-++ +.|+-....-|+.| +|+|+-+- + +-+.|+.-. -....+..|++.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---P-----sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---P-----SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---c-----ceeeechhh-----------HHHHHHHhhHeeee
Confidence 468999997554 45664444445555 77654332 1 223443321 12356788999998
Q ss_pred CHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecC-CccCCCCCCCcHHHHhhhcCchhhHHhhcchhhh
Q 003661 480 TFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMSIYFPYTEEKRRLKSFHPEIEELLYSDVEN 558 (805)
Q Consensus 480 S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 558 (805)
=+-|.+-.++ .|+ ..+.|.+ =+|.-.+.+... ..
T Consensus 144 lPFE~~~y~k--------------------~g~-----~~~yVGHpl~d~i~~~~~r~--------------------~a 178 (381)
T COG0763 144 LPFEPAFYDK--------------------FGL-----PCTYVGHPLADEIPLLPDRE--------------------AA 178 (381)
T ss_pred cCCCHHHHHh--------------------cCC-----CeEEeCChhhhhccccccHH--------------------HH
Confidence 8776552111 121 2334433 233332333322 23
Q ss_pred hhhhccccCCCCc-EEEEEee-ccC-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 003661 559 KEHLCVLKDRNKP-ILFTMAR-LDR-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 559 ~~~~G~l~~~~k~-vIl~vGR-L~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~ 635 (805)
++.+|+ +.+++ +.+..|. -.. .+....+++++.+++.++|+.++++--.... .+.......+..
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~-----------~~~~~~~~~~~~ 245 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK-----------YRRIIEEALKWE 245 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH-----------HHHHHHHHhhcc
Confidence 466777 55544 4556663 222 4567788899999998999999999876632 122222222222
Q ss_pred C-CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 636 L-NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 636 L-~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
. ..++...+ ++-+..++. ||+.+.. .|.+.+|+|.+|+|.|++
T Consensus 246 ~~~~~~~~~~--------~~~~~a~~~-aD~al~a-----SGT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 246 VAGLSLILID--------GEKRKAFAA-ADAALAA-----SGTATLEAALAGTPMVVA 289 (381)
T ss_pred ccCceEEecC--------chHHHHHHH-hhHHHHh-----ccHHHHHHHHhCCCEEEE
Confidence 1 12233332 466777774 8877765 599999999999999987
No 131
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.48 E-value=0.007 Score=66.79 Aligned_cols=192 Identities=14% Similarity=0.081 Sum_probs=124.5
Q ss_pred CcEEEecCCccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhhhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhH
Q 003661 517 PKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNA 596 (805)
Q Consensus 517 ~ki~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~ 596 (805)
.+...++.++|.+.|.|.+.... -.--+.++|.-.+. -++.+-+.+-.-.
T Consensus 161 ~~~~~~~~a~d~~~~~~i~~da~-----------------------------~~~dL~~ign~~pD-r~e~~ke~~~~ps 210 (373)
T COG4641 161 RNCYYLPWAVDDSLFHPIPPDAS-----------------------------YDVDLNLIGNPYPD-RVEEIKEFFVEPS 210 (373)
T ss_pred cceeccCccCCchhcccCCcccc-----------------------------ceeeeEEecCCCcc-HHHHHHHHhhccc
Confidence 35667899999999988774321 11135667765443 2222223322211
Q ss_pred -ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCCh-HHHHHHHHccCcEEEeCCC---
Q 003661 597 -KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRN-GELYRYICDTKGAFVQPAL--- 671 (805)
Q Consensus 597 -~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~-~el~~~la~aaDvfV~PS~--- 671 (805)
++..+-++...|..... . +....-.+++..+| .... ..+...+.. .++++.-++
T Consensus 211 ~kl~v~rr~~~~g~~y~~---------------~-~~~~~~~~~~~yIg----~~~~~~~v~~~~~~-~~~~~n~~r~~~ 269 (373)
T COG4641 211 FKLMVDRRFYVLGPRYPD---------------D-IWGRTWEPNVQYIG----YYNPKDGVPNAFKR-DDVTLNINRASI 269 (373)
T ss_pred hhhhccceeeecCCccch---------------h-hhcccccchhhhhh----ccCccchhhhcccc-cceeeeecHHHH
Confidence 11122455666655220 0 11111234566666 3333 556666663 666665433
Q ss_pred CCC---CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Q 003661 672 YEA---FGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIE 748 (805)
Q Consensus 672 ~E~---fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~ 748 (805)
-++ +.+-+.|+|+||.|.+++...+..-...+|+.=++.. |..++.+++..++ ..++.+++|+++|.+++.
T Consensus 270 ~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~--d~kdl~~~~~yll----~h~~erkeiae~~ye~V~ 343 (373)
T COG4641 270 ANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ--DSKDLKEKLKYLL----NHPDERKEIAECAYERVL 343 (373)
T ss_pred HhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec--CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHH
Confidence 233 3778999999999999999999988998887766654 8999999996555 899999999999999999
Q ss_pred HhCCHHHHHHHHHHHHH
Q 003661 749 EKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 749 ~~ysw~~~a~~ll~Ly~ 765 (805)
..||.+.-+.+++....
T Consensus 344 ~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 344 ARHTYEERIFKLLNEIA 360 (373)
T ss_pred HhccHHHHHHHHHHHHH
Confidence 99999988877766543
No 132
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.13 E-value=0.0064 Score=73.61 Aligned_cols=154 Identities=13% Similarity=0.120 Sum_probs=113.2
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHH-HHH---HHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHH
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTG-LVE---WYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSL 630 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~-Lie---A~~~l~~~~----~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~l 630 (805)
+++.|...+++...++++-|+...|...+ ++. -+.++++.- ....+++.|.-.+. |..-+..++.+..+
T Consensus 532 ~~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIk~I~~v 608 (815)
T PRK14986 532 AQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASA---YYMAKHIIHLINDV 608 (815)
T ss_pred HHHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHHH
Confidence 34457777899999999999999999888 554 455555431 23677777766543 44445666667776
Q ss_pred HH----HcCCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc
Q 003661 631 ID----QYKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV 702 (805)
Q Consensus 631 i~----~l~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVat~~GG~~EiI~ 702 (805)
++ .-.+.+ +|.|+. -.+ -.+.+.|-.++|+-.+-|. .|+.|..=+=||.-|.++++|-.|...|+.+
T Consensus 609 a~~in~Dp~v~~~lkVVFle----nY~-vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e 683 (815)
T PRK14986 609 AKVINNDPQIGDKLKVVFIP----NYS-VSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLE 683 (815)
T ss_pred HHHhccChhhcCceeEEEeC----CCC-HHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHH
Confidence 76 223345 788886 233 3455555557999999886 9999999999999999999999999999998
Q ss_pred c--CceEEEECCCCHHHHHHH
Q 003661 703 N--GKSGYHIDPYHGEQAAEI 721 (805)
Q Consensus 703 d--g~~G~li~p~d~e~lA~a 721 (805)
+ ++|||.|-. +.++.++.
T Consensus 684 ~vG~eN~~~fG~-~~~ev~~~ 703 (815)
T PRK14986 684 HVGEENIFIFGN-TAEEVEAL 703 (815)
T ss_pred hcCCCcEEEeCC-CHHHHHHH
Confidence 7 889999954 56665543
No 133
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.10 E-value=0.051 Score=64.16 Aligned_cols=196 Identities=17% Similarity=0.133 Sum_probs=108.6
Q ss_pred CCceEEEE-cCCCchHHHHHHHHHcCC--cEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecC
Q 003661 404 GKPDLIIG-NYSDGNIVASLLAHKLGV--TQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST 480 (805)
Q Consensus 404 ~kPDIIh~-h~~~~~lva~llar~lgi--p~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S 480 (805)
.+||++++ -+++.|+-.+..+++.|+ |+++-+- + +-+.|+.-. -+..-+..|.++|.=
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs---P-----qVWAWR~~R-----------ikki~k~vD~ll~If 369 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC---P-----SIWAWRPKR-----------KTILEKYLDLLLLIL 369 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC---c-----cceeeCcch-----------HHHHHHHhhhheecC
Confidence 58999997 555668855566677785 8654332 1 122333211 112345778888888
Q ss_pred HHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCC-ccCCCCCCCcHHHHhhhcCchhhHHhhcchhhhh
Q 003661 481 FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENK 559 (805)
Q Consensus 481 ~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~ 559 (805)
+-|.+- |+ .+|+ +...|.|. +|.-...+... +.+
T Consensus 370 PFE~~~-------------------y~-~~gv-----~v~yVGHPL~d~i~~~~~~~--------------------~~r 404 (608)
T PRK01021 370 PFEQNL-------------------FK-DSPL-----RTVYLGHPLVETISSFSPNL--------------------SWK 404 (608)
T ss_pred ccCHHH-------------------HH-hcCC-----CeEEECCcHHhhcccCCCHH--------------------HHH
Confidence 766551 21 1233 34445443 34321112111 224
Q ss_pred hhhccccCCCCcEE-EEEe-eccC-CCCHHHHHHHHH--HhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHc
Q 003661 560 EHLCVLKDRNKPIL-FTMA-RLDR-VKNLTGLVEWYG--KNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQY 634 (805)
Q Consensus 560 ~~~G~l~~~~k~vI-l~vG-RL~~-~Kgl~~LieA~~--~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l 634 (805)
+++|+ ++++++| +..| |-.+ .+.+..+++++. .+. ++.++++..... ...+.+.+..+..
T Consensus 405 ~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~~l~fvvp~a~~----------~~~~~i~~~~~~~ 469 (608)
T PRK01021 405 EQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---STHQLLVSSANP----------KYDHLILEVLQQE 469 (608)
T ss_pred HHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---cCeEEEEecCch----------hhHHHHHHHHhhc
Confidence 55777 5555554 5556 3333 356778888887 443 357777743321 1123344444433
Q ss_pred CCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 635 KLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 635 ~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
+. -.+..+. ..+-+.+++ +||+.+.. .|.+.+|++.+|+|.|+.
T Consensus 470 ~~-~~~~ii~-------~~~~~~~m~-aaD~aLaa-----SGTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 470 GC-LHSHIVP-------SQFRYELMR-ECDCALAK-----CGTIVLETALNQTPTIVT 513 (608)
T ss_pred CC-CCeEEec-------CcchHHHHH-hcCeeeec-----CCHHHHHHHHhCCCEEEE
Confidence 21 1234432 012367777 59998876 599999999999999985
No 134
>PLN02208 glycosyltransferase family protein
Probab=97.04 E-value=1 Score=52.15 Aligned_cols=94 Identities=10% Similarity=0.059 Sum_probs=55.9
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEECC
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~d-g~~G~li~p 712 (805)
.++.+.+ +++..+++.. . +.++||.= -| -++++||+++|+|+|+- +.......+.+ -+.|..++.
T Consensus 311 ~g~~v~~----W~PQ~~iL~H-~-~v~~FvtH---cG-~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 380 (442)
T PLN02208 311 RGVVWGG----WVQQPLILDH-P-SIGCFVNH---CG-PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSR 380 (442)
T ss_pred CCcEeec----cCCHHHHhcC-C-ccCeEEcc---CC-chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecc
Confidence 3466666 6666676652 1 12345532 22 24899999999999996 33334444444 457877753
Q ss_pred -----CCHHHHHHHHHHHHHHhhCCH-HHHHHHHHHHHH
Q 003661 713 -----YHGEQAAEILVDFFEKCKADP-SYWDKISLGGLK 745 (805)
Q Consensus 713 -----~d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~ar~ 745 (805)
-+.++++++|.+++ .++ +..+++.+++++
T Consensus 381 ~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 381 EKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred ccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 26678888887766 554 334444444443
No 135
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.01 E-value=0.013 Score=70.24 Aligned_cols=144 Identities=17% Similarity=0.142 Sum_probs=110.3
Q ss_pred hhccccCCCCcEEEEEeeccCCCCHHHHHH----HHHHhH-ccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC
Q 003661 561 HLCVLKDRNKPILFTMARLDRVKNLTGLVE----WYGKNA-KLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK 635 (805)
Q Consensus 561 ~~G~l~~~~k~vIl~vGRL~~~Kgl~~Lie----A~~~l~-~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~ 635 (805)
..|+..+++...++++-|+...|..+..+. .+..++ ...|.+.+++.|.-.+. |..-+..++.+...++..+
T Consensus 478 ~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~---y~~aK~iIk~I~~~a~~in 554 (750)
T COG0058 478 RTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPA---DYAAKEIIKLINDVADVIN 554 (750)
T ss_pred hcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCc---chHHHHHHHHHHHHHHhhc
Confidence 345666889999999999999998777653 444444 33455666777765542 4445566777777788777
Q ss_pred CCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEEC
Q 003661 636 LNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHID 711 (805)
Q Consensus 636 L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVat~~GG~~EiI~--dg~~G~li~ 711 (805)
...+|.|+. -.+ -.+.+.|-.++||-.+.|. .|+.|.+-+=||--|.++|+|-.|...|+.+ ++.|||+|-
T Consensus 555 ~~lkVvFl~----nYd-vslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 555 NKLKVVFLP----NYD-VSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred ccceEEEeC----CCC-hhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 777899996 233 3455555557999999876 8999999999999999999999999999997 899999996
Q ss_pred C
Q 003661 712 P 712 (805)
Q Consensus 712 p 712 (805)
.
T Consensus 630 ~ 630 (750)
T COG0058 630 E 630 (750)
T ss_pred C
Confidence 4
No 136
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=96.89 E-value=1 Score=51.77 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=59.6
Q ss_pred HHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc
Q 003661 628 YSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVN 703 (805)
Q Consensus 628 ~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~----GG~~EiI~d 703 (805)
.++.+.+.-+.+++.+.. ..+..|+..+++. +|++|..-.+ +++=|++.|+|+|+-.. -|..+-+
T Consensus 297 ~~l~~~~~~~~~~~vi~~---~~~~~e~~~iIs~-~dl~ig~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVMD---ELNDLEMGKILGA-CELTVGTRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEecC---CCChHHHHHHHhh-CCEEEEecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 344444443445554431 2345688899995 9999865432 56779999999999533 3333333
Q ss_pred CceEEEECC--CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q 003661 704 GKSGYHIDP--YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKR 746 (805)
Q Consensus 704 g~~G~li~p--~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~ 746 (805)
|...++++. -+.+++.+++.+ +++|.+.+++.-+.+...
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~----~~~~r~~~~~~l~~~v~~ 406 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVAD----TLGQLPALNARLAEAVSR 406 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHH----HHhCHHHHHHHHHHHHHH
Confidence 223344443 345667777754 447766554433333333
No 137
>PLN02562 UDP-glycosyltransferase
Probab=96.88 E-value=1.4 Score=51.17 Aligned_cols=88 Identities=17% Similarity=0.161 Sum_probs=58.6
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEEC
Q 003661 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID 711 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~dg-~~G~li~ 711 (805)
.+++...+ +++..+++.. . +.++||.- -| -++++||+.+|+|+|+. |....+..+.+. +.|+-+.
T Consensus 327 ~~~~~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 396 (448)
T PLN02562 327 SKQGKVVS----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS 396 (448)
T ss_pred ccCEEEEe----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC
Confidence 45777777 7777777763 1 23456642 23 34899999999999986 444455555542 5677765
Q ss_pred CCCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003661 712 PYHGEQAAEILVDFFEKCKADPSYWDK 738 (805)
Q Consensus 712 p~d~e~lA~aI~~~l~~l~~dp~~~~~ 738 (805)
.-+.+++++++.+++ .|++++++
T Consensus 397 ~~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 397 GFGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCCHHHHHHHHHHHh----CCHHHHHH
Confidence 557888999997766 67765543
No 138
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.85 E-value=0.011 Score=59.24 Aligned_cols=111 Identities=20% Similarity=0.240 Sum_probs=59.4
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCCcccCCCC--hhh-hhhcccccccchhhhHhHHH
Q 003661 394 VAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKL-GVTQCTIAHALEKTKYPDS--DIY-WKNLDDKYHFSCQFTADLIA 469 (805)
Q Consensus 394 ~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~l-gip~v~t~H~l~~~k~~~s--~~~-~~~~~~~y~~~~~~~~e~~a 469 (805)
+...++++ +..||||++|...|..+ .+...+ .+|++.-+--.......+. |.. -.......+...+-.....+
T Consensus 56 a~~~L~~~-Gf~PDvI~~H~GWGe~L--flkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~ 132 (171)
T PF12000_consen 56 AARQLRAQ-GFVPDVIIAHPGWGETL--FLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLA 132 (171)
T ss_pred HHHHHHHc-CCCCCEEEEcCCcchhh--hHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHH
Confidence 33444444 67899999998777322 234444 7776632111000000000 000 00111112222233345668
Q ss_pred hhcCCEEEecCHHHHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCccCCCC
Q 003661 470 MNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIY 531 (805)
Q Consensus 470 ~~~AD~IIt~S~~~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGvD~~~f 531 (805)
+..||..|+.|...+... | ..+.+|+.||+-|||++.+
T Consensus 133 l~~~D~~isPT~wQ~~~f---------------P---------~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 133 LEQADAGISPTRWQRSQF---------------P---------AEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHhCCcCcCCCHHHHHhC---------------C---------HHHHcCcEEeecccchhhc
Confidence 889999999997765421 2 1225699999999998764
No 139
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.80 E-value=1.6 Score=51.07 Aligned_cols=88 Identities=16% Similarity=0.093 Sum_probs=53.1
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----ccc-cccccCceEEEECC
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPA-EIIVNGKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~G----G~~-EiI~dg~~G~li~p 712 (805)
+++.+.+ +++..+++.. . +.++||.= -|+ ++++||+.+|+|+|+.... ..+ ..++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G~-nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CGW-NSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Ccc-chHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 5566666 6677777631 1 35556642 233 4899999999999996333 333 33444456766531
Q ss_pred -------------CCHHHHHHHHHHHHHHhhCCHHHHHH
Q 003661 713 -------------YHGEQAAEILVDFFEKCKADPSYWDK 738 (805)
Q Consensus 713 -------------~d~e~lA~aI~~~l~~l~~dp~~~~~ 738 (805)
-+.++++++|.+++. .|++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 256788888876662 25554443
No 140
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=96.73 E-value=0.31 Score=53.01 Aligned_cols=167 Identities=10% Similarity=0.013 Sum_probs=114.5
Q ss_pred CcEEEEEeec-cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Q 003661 570 KPILFTMARL-DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 570 k~vIl~vGRL-~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~ 648 (805)
.++.+-+|+= ++..+.-.+++++.+.. ..++++++.=+-|.. ..++++++.+..+++--.++++.+- +
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~PlsYp~g------n~~Yi~~V~~~~~~lF~~~~~~~L~---e 213 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMGYPAN------NQAYIEEVRQAGLALFGAENFQILT---E 213 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECCcCCC------CHHHHHHHHHHHHHhcCcccEEehh---h
Confidence 3566667754 56777777777776654 367888877665431 1367888888888887657888886 5
Q ss_pred cCChHHHHHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCH--HHHHHHHHH
Q 003661 649 RVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYHG--EQAAEILVD 724 (805)
Q Consensus 649 ~v~~~el~~~la~aaDvfV~PS-~~E~fGltvlEAMA~GlPVVat-~~GG~~EiI~dg~~G~li~p~d~--e~lA~aI~~ 724 (805)
.++.+|...+++. +|+.++-- +.+|.| +++=.+..|+||+.+ +..-..++.+.|.. ++++..+. ..+.+
T Consensus 214 ~l~f~eYl~lL~~-~Dl~~f~~~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~gv~-Vlf~~d~L~~~~v~e---- 286 (322)
T PRK02797 214 KLPFDDYLALLRQ-CDLGYFIFARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQGLP-VLFTGDDLDEDIVRE---- 286 (322)
T ss_pred hCCHHHHHHHHHh-CCEEEEeechhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhCCCe-EEecCCcccHHHHHH----
Confidence 7889999999995 99888764 688999 555689999999987 55666776666544 33443322 22211
Q ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 725 FFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 725 ~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
..++|...-++.+. |+-+.+++.|.+++..
T Consensus 287 ----------~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 287 ----------AQRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred ----------HHHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 12334445555552 9999999999888754
No 141
>PLN03007 UDP-glucosyltransferase family protein
Probab=96.71 E-value=1.9 Score=50.44 Aligned_cols=78 Identities=13% Similarity=0.175 Sum_probs=46.9
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccC--cEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc-CceEEE
Q 003661 637 NGQFRWISSQMNRVRNGELYRYICDTK--GAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVN-GKSGYH 709 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~la~aa--DvfV~PS~~E~fGltvlEAMA~GlPVVat~~G----G~~EiI~d-g~~G~l 709 (805)
..+++..+ +++..+++. .+ ++||.- -| -++++||+++|+|+|+.... -.+..+.+ -..|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~----h~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD----HQATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc----cCccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 34677777 666666665 34 346643 22 34899999999999996333 23332221 123433
Q ss_pred E--------C--CCCHHHHHHHHHHHH
Q 003661 710 I--------D--PYHGEQAAEILVDFF 726 (805)
Q Consensus 710 i--------~--p~d~e~lA~aI~~~l 726 (805)
+ + .-+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 2 1 126778888887666
No 142
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=96.60 E-value=0.007 Score=73.06 Aligned_cols=152 Identities=12% Similarity=0.033 Sum_probs=109.1
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHH-HHHH---HHHhHccCC-----CeEEEEEeCCCCCCCccHHHHHHHHHHHH
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTG-LVEW---YGKNAKLRE-----LVNLVVVGGDRRKESKDLEEQAEMKKMYS 629 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~-LieA---~~~l~~~~~-----~v~LvIVG~g~~~~~~d~ee~~e~~~l~~ 629 (805)
+++.|+..+++...++++-|+...|...+ ++.. +.++++. | ...+++.|.-.+. +..-+..++.+..
T Consensus 518 ~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~-p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~ 593 (798)
T PRK14985 518 KQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIREN-PQADRVPRVFLFGAKAAPG---YYLAKNIIFAINK 593 (798)
T ss_pred HHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhC-CCcCCCCeEEEEeecCCCC---cHHHHHHHHHHHH
Confidence 34457777899999999999999999888 5544 4555442 2 2677777776543 3344455555555
Q ss_pred HHHHcC----CCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCcccccccc
Q 003661 630 LIDQYK----LNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEII 701 (805)
Q Consensus 630 li~~l~----L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVat~~GG~~EiI 701 (805)
+++..+ +.+ +|.|+. -.. -.+.+.|-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.
T Consensus 594 va~~in~Dp~v~~~lkVVFle----nY~-VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~ 668 (798)
T PRK14985 594 VAEVINNDPLVGDKLKVVFLP----DYC-VSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIA 668 (798)
T ss_pred HHHHhcCChhhCCceeEEEeC----CCC-hHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHH
Confidence 554432 334 788886 233 3455555557999999886 999999999999999999999999999999
Q ss_pred cc--CceEEEECCCCHHHHHH
Q 003661 702 VN--GKSGYHIDPYHGEQAAE 720 (805)
Q Consensus 702 ~d--g~~G~li~p~d~e~lA~ 720 (805)
++ ++|||.|-. +.++..+
T Consensus 669 e~vG~eN~f~fG~-~~~ev~~ 688 (798)
T PRK14985 669 EQVGEENIFIFGH-TVEQVKA 688 (798)
T ss_pred HHhCcCcEEEeCC-CHHHHHH
Confidence 76 789999964 4555433
No 143
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=96.60 E-value=0.021 Score=69.31 Aligned_cols=153 Identities=15% Similarity=0.103 Sum_probs=110.7
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHH----HHHHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHH
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTG----LVEWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSL 630 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~----LieA~~~l~~~~----~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~l 630 (805)
++..|+..+++...++++-|+...|...+ .++.+.++++.- ....+++.|.-.+. +..-+..++.+..+
T Consensus 519 ~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~v 595 (797)
T cd04300 519 KKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPG---YYMAKLIIKLINAV 595 (797)
T ss_pred HHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCC---cHHHHHHHHHHHHH
Confidence 44567777999999999999999999888 445566665431 12667777765443 33444555666666
Q ss_pred HHH----cCCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc
Q 003661 631 IDQ----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV 702 (805)
Q Consensus 631 i~~----l~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVat~~GG~~EiI~ 702 (805)
++. -.+.+ +|.|+. -.. -.+.+.|-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.+
T Consensus 596 a~~in~Dp~v~~~lkVVFle----nY~-VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e 670 (797)
T cd04300 596 ADVVNNDPDVGDKLKVVFLP----NYN-VSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAE 670 (797)
T ss_pred HHHhccChhcCCceEEEEeC----CCC-hHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHH
Confidence 653 22344 788886 233 3455555557999999886 9999999999999999999999999999998
Q ss_pred c--CceEEEECCCCHHHHHH
Q 003661 703 N--GKSGYHIDPYHGEQAAE 720 (805)
Q Consensus 703 d--g~~G~li~p~d~e~lA~ 720 (805)
+ ++|+|+|-. +.++..+
T Consensus 671 ~vG~eN~fiFG~-~~~ev~~ 689 (797)
T cd04300 671 EVGEENIFIFGL-TAEEVEA 689 (797)
T ss_pred HhCcCcEEEeCC-CHHHHHH
Confidence 7 789999964 5555443
No 144
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.59 E-value=2.3 Score=49.77 Aligned_cols=118 Identities=14% Similarity=0.148 Sum_probs=65.5
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEECC
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~d-g~~G~li~p 712 (805)
.+++..+ +++..+++.. .+.++||.- -|+ .+++||+++|+|+|+- +..-.+..+.+ -+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTH---CGW-NSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEec---CCc-hHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4577777 6666666652 125677753 233 4899999999999995 33334444433 357776621
Q ss_pred -----CCHHHHHHHHHHHHHHhhCCHHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Q 003661 713 -----YHGEQAAEILVDFFEKCKADPSYWDK---ISLGGLKRIEEKYTWKIYSQRLLTLTGVYG 768 (805)
Q Consensus 713 -----~d~e~lA~aI~~~l~~l~~dp~~~~~---ms~~ar~~v~~~ysw~~~a~~ll~Ly~~~~ 768 (805)
-+.+++++++.+++. ++++++++ +++.+++.+.+.=|-....+++.+-+..+|
T Consensus 413 ~~~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 413 GADTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473 (477)
T ss_pred CCCCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhc
Confidence 256788888877652 34443332 333333333232233334455555444444
No 145
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=96.46 E-value=0.021 Score=69.21 Aligned_cols=154 Identities=18% Similarity=0.111 Sum_probs=109.7
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHH-HH---HHHHHhHccC----CCeEEEEEeCCCCCCCccHHHHHHHHHHHHH
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTG-LV---EWYGKNAKLR----ELVNLVVVGGDRRKESKDLEEQAEMKKMYSL 630 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~-Li---eA~~~l~~~~----~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~l 630 (805)
+++.|+..+++...++++-|+...|...+ ++ +.+.++++.- ....+++.|.-.+. +..-+..++.+..+
T Consensus 516 ~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~---y~~aK~iIklI~~v 592 (794)
T TIGR02093 516 KEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPG---YHMAKLIIKLINSV 592 (794)
T ss_pred HHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCC---cHHHHHHHHHHHHH
Confidence 44567777899999999999999999888 44 4455554420 13567777765543 33334455555555
Q ss_pred HHHc----CCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc
Q 003661 631 IDQY----KLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV 702 (805)
Q Consensus 631 i~~l----~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVat~~GG~~EiI~ 702 (805)
++.. .+.+ +|.|+. -.+ -.+.+.|-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.+
T Consensus 593 a~~iN~Dp~v~~~lkVVFle----nY~-VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e 667 (794)
T TIGR02093 593 AEVVNNDPAVGDKLKVVFVP----NYN-VSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIRE 667 (794)
T ss_pred HHHhccChhhCCceeEEEeC----CCC-hHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHH
Confidence 5432 2344 788886 233 3445555557999999886 9999999999999999999999999999998
Q ss_pred c--CceEEEECCCCHHHHHHH
Q 003661 703 N--GKSGYHIDPYHGEQAAEI 721 (805)
Q Consensus 703 d--g~~G~li~p~d~e~lA~a 721 (805)
+ ++|+|+|-. +.++..+.
T Consensus 668 ~vG~eN~fiFG~-~~~ev~~~ 687 (794)
T TIGR02093 668 EVGAENIFIFGL-TVEEVEAL 687 (794)
T ss_pred HhCcccEEEcCC-CHHHHHHH
Confidence 7 889999954 55655443
No 146
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.39 E-value=2.8 Score=48.62 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=51.9
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEEC
Q 003661 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID 711 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~dg-~~G~li~ 711 (805)
.+++.+.+ +++..+++..= +.++||.- +-.++++||+++|+|+|+- +..-....+.+. +.|+-+.
T Consensus 316 ~~~~~i~~----W~PQ~~iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~ 385 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVK 385 (449)
T ss_pred CCceEEeC----CCCHHHHhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEe
Confidence 35678777 67767766521 13466642 2246999999999999996 333444555553 4676653
Q ss_pred CC------CHHHHHHHHHHHH
Q 003661 712 PY------HGEQAAEILVDFF 726 (805)
Q Consensus 712 p~------d~e~lA~aI~~~l 726 (805)
.. +.+++++++.+++
T Consensus 386 ~~~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 386 AEKESGIAKREEIEFSIKEVM 406 (449)
T ss_pred ecccCCcccHHHHHHHHHHHh
Confidence 21 5688888887776
No 147
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=96.23 E-value=0.23 Score=59.76 Aligned_cols=151 Identities=14% Similarity=0.128 Sum_probs=94.9
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHH----HHHHHHhHcc----CCCeEEEEEeCCCCCCCccHHHHHHHHHHHHH
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGL----VEWYGKNAKL----RELVNLVVVGGDRRKESKDLEEQAEMKKMYSL 630 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~L----ieA~~~l~~~----~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~l 630 (805)
++..|+..+++...++++-|+...|...+. ++-+.++++. ...+.+++.|.-.+. |..-+..++.+.++
T Consensus 433 ~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~---d~~gK~iIk~I~~v 509 (713)
T PF00343_consen 433 KKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPG---DYMGKEIIKLINNV 509 (713)
T ss_dssp HHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT----HHHHHHHHHHHHH
T ss_pred HHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCC---cHHHHHHHHHHHHH
Confidence 344566568888899999999999998883 4556666543 123778888876553 33334455555555
Q ss_pred HHH----cCCCC--cEEEecCCCCcCChHHHHHHHHccCcEEEeCCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc
Q 003661 631 IDQ----YKLNG--QFRWISSQMNRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV 702 (805)
Q Consensus 631 i~~----l~L~~--~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~--~E~fGltvlEAMA~GlPVVat~~GG~~EiI~ 702 (805)
++. -.+.+ +|.|+. -. +-.+.+.+-.++||-.+.++ .|+.|.+-+=||.-|.+.++|-.|...|+.+
T Consensus 510 a~~in~Dp~v~~~lkVvFle----nY-dvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e 584 (713)
T PF00343_consen 510 AEVINNDPEVGDRLKVVFLE----NY-DVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAE 584 (713)
T ss_dssp HHHHCT-TTTCCGEEEEEET----T--SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHH
T ss_pred HHHHhcChhhccceeEEeec----CC-cHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHH
Confidence 542 23444 789986 33 34566666668999999886 9999999999999999999999999999986
Q ss_pred c--CceEEEECCCCHHHH
Q 003661 703 N--GKSGYHIDPYHGEQA 718 (805)
Q Consensus 703 d--g~~G~li~p~d~e~l 718 (805)
. ..|+|+|-- +.+++
T Consensus 585 ~vG~eN~fiFG~-~~~ev 601 (713)
T PF00343_consen 585 AVGEENIFIFGL-TAEEV 601 (713)
T ss_dssp HH-GGGSEEES--BHHHH
T ss_pred hcCCCcEEEcCC-CHHHH
Confidence 4 458888853 44443
No 148
>PLN00414 glycosyltransferase family protein
Probab=96.20 E-value=3.5 Score=47.79 Aligned_cols=93 Identities=9% Similarity=0.042 Sum_probs=57.2
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccc-cCceEEEECC--
Q 003661 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIV-NGKSGYHIDP-- 712 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~----~GG~~EiI~-dg~~G~li~p-- 712 (805)
..+.| +++..+++.. . +.+.||.- +--++++||+++|+|+|+.. ..-.+..+. .-+.|..+..
T Consensus 314 ~vv~~----w~PQ~~vL~h-~-~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~ 383 (446)
T PLN00414 314 IVWEG----WVEQPLILSH-P-SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRED 383 (446)
T ss_pred eEEec----cCCHHHHhcC-C-ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecccc
Confidence 44455 6667777652 1 23567753 22358999999999999963 333444553 4467777742
Q ss_pred ---CCHHHHHHHHHHHHHHhhCCH-HHHHHHHHHHHHH
Q 003661 713 ---YHGEQAAEILVDFFEKCKADP-SYWDKISLGGLKR 746 (805)
Q Consensus 713 ---~d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~ar~~ 746 (805)
-+.+++++++.+++ .++ +..+++.+++++.
T Consensus 384 ~~~~~~~~i~~~v~~~m----~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 384 SGWFSKESLRDTVKSVM----DKDSEIGNLVKRNHKKL 417 (446)
T ss_pred CCccCHHHHHHHHHHHh----cCChhhHHHHHHHHHHH
Confidence 36788888887766 553 3444455544443
No 149
>PLN02210 UDP-glucosyl transferase
Probab=96.09 E-value=4 Score=47.47 Aligned_cols=133 Identities=10% Similarity=0.118 Sum_probs=72.1
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEE-EeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCC
Q 003661 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVV-VGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 569 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~ 647 (805)
...+.++.|.+... .-+.+-+++..+... +.+|++ ++..... .+ ...+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~~~--~~------~~~~~~~~~----~~~g~v~~--- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKEKA--QN------VQVLQEMVK----EGQGVVLE--- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCccc--cc------hhhHHhhcc----CCCeEEEe---
Confidence 45677888887532 334444444444443 235544 4422110 00 111222211 13334455
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEECC------CCHH
Q 003661 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVN-GKSGYHIDP------YHGE 716 (805)
Q Consensus 648 ~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~----GG~~EiI~d-g~~G~li~p------~d~e 716 (805)
+++..+++..- +.++||.- -|+ ++++||+++|+|+|+-.. .-.+..+.+ -+.|..++. -+.+
T Consensus 331 -w~PQ~~iL~h~--~vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~ 403 (456)
T PLN02210 331 -WSPQEKILSHM--AISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVE 403 (456)
T ss_pred -cCCHHHHhcCc--CcCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHH
Confidence 66677766521 12466643 233 389999999999999633 334445554 467877642 3678
Q ss_pred HHHHHHHHHH
Q 003661 717 QAAEILVDFF 726 (805)
Q Consensus 717 ~lA~aI~~~l 726 (805)
++++++.+++
T Consensus 404 ~l~~av~~~m 413 (456)
T PLN02210 404 EVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHh
Confidence 8888887766
No 150
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=96.02 E-value=0.025 Score=49.88 Aligned_cols=70 Identities=17% Similarity=0.134 Sum_probs=49.2
Q ss_pred cCeEEEEeccCcCCcccccccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003661 358 KYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDG--NIVASLLAHKLGVTQCTIA 435 (805)
Q Consensus 358 ~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~--~lva~llar~lgip~v~t~ 435 (805)
++.++..+|+... ......|.+.....-. +.|.- +++.||||+|...+ +.-+.+.|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~-R~Ili--rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFPLL-RNILI--RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhHHH-HHHHH--HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 4789999998652 2334555544433333 33332 34799999999866 4577888999999999999
Q ss_pred cCC
Q 003661 436 HAL 438 (805)
Q Consensus 436 H~l 438 (805)
|++
T Consensus 83 HSL 85 (90)
T PF08288_consen 83 HSL 85 (90)
T ss_pred ccc
Confidence 987
No 151
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.00 E-value=4.4 Score=47.10 Aligned_cols=93 Identities=11% Similarity=0.154 Sum_probs=58.3
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEEC
Q 003661 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID 711 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~dg-~~G~li~ 711 (805)
.++....+ +++..+++.. . +.++||.- -|+ ++++||+++|+|+|+. +....+..+.+. +.|+-+.
T Consensus 323 ~~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH---~G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~ 392 (451)
T PLN02410 323 SGRGYIVK----WAPQKEVLSH-P-AVGGFWSH---CGW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE 392 (451)
T ss_pred cCCeEEEc----cCCHHHHhCC-C-ccCeeeec---Cch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC
Confidence 35666666 7777777763 1 24457753 233 4899999999999995 444445555444 5777663
Q ss_pred -CCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q 003661 712 -PYHGEQAAEILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 712 -p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
.-+.+++++++.+++ .+++ .+++.++++
T Consensus 393 ~~~~~~~v~~av~~lm----~~~~-~~~~r~~a~ 421 (451)
T PLN02410 393 GDLDRGAVERAVKRLM----VEEE-GEEMRKRAI 421 (451)
T ss_pred CcccHHHHHHHHHHHH----cCCc-HHHHHHHHH
Confidence 336788999997766 5653 333444333
No 152
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=95.80 E-value=2.4 Score=46.91 Aligned_cols=133 Identities=16% Similarity=0.145 Sum_probs=76.0
Q ss_pred CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCe---EEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003661 568 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELV---NLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS 644 (805)
Q Consensus 568 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v---~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG 644 (805)
....+++++|. -.-|-+.+..++ .....-+++ -++|.|...+. +...++.....-.++|...-
T Consensus 218 E~~~Ilvs~GG--G~dG~eLi~~~l-~A~~~l~~l~~~~~ivtGP~MP~-----------~~r~~l~~~A~~~p~i~I~~ 283 (400)
T COG4671 218 EGFDILVSVGG--GADGAELIETAL-AAAQLLAGLNHKWLIVTGPFMPE-----------AQRQKLLASAPKRPHISIFE 283 (400)
T ss_pred ccceEEEecCC--ChhhHHHHHHHH-HHhhhCCCCCcceEEEeCCCCCH-----------HHHHHHHHhcccCCCeEEEE
Confidence 34567788874 234544433333 322222333 36666666541 33344444444457888886
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc--cccc------CceEEEECCC--C
Q 003661 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE--IIVN------GKSGYHIDPY--H 714 (805)
Q Consensus 645 ~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~E--iI~d------g~~G~li~p~--d 714 (805)
+. .++..+++. |+..|.=+- + +|+.|-++.|||.+.-..+.+.| .|.- |-..++ .|. +
T Consensus 284 f~------~~~~~ll~g-A~~vVSm~G---Y-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL-~pe~lt 351 (400)
T COG4671 284 FR------NDFESLLAG-ARLVVSMGG---Y-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVL-LPENLT 351 (400)
T ss_pred hh------hhHHHHHHh-hheeeeccc---c-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceee-CcccCC
Confidence 43 357888885 888886432 2 59999999999999876555544 2211 222333 343 4
Q ss_pred HHHHHHHHHHHH
Q 003661 715 GEQAAEILVDFF 726 (805)
Q Consensus 715 ~e~lA~aI~~~l 726 (805)
++.+|++|...+
T Consensus 352 ~~~La~al~~~l 363 (400)
T COG4671 352 PQNLADALKAAL 363 (400)
T ss_pred hHHHHHHHHhcc
Confidence 677777775444
No 153
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=95.71 E-value=0.2 Score=56.11 Aligned_cols=91 Identities=15% Similarity=0.047 Sum_probs=56.6
Q ss_pred CcEEEEEeecc-C-CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCC
Q 003661 570 KPILFTMARLD-R-VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 570 k~vIl~vGRL~-~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~ 647 (805)
+.+.+..|.-. . .+.+..+++++.++.+.. ..+++.|... .+.+.+...+. ..+.+.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~~------------~~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFFK------------GKDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCCc------------HHHHHHHHhcC---CCcEEec---
Confidence 34445555432 1 355667778988887643 6677776542 12333333322 2344543
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 648 ~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
+.+.+++ ++|+.+.. .|.+.+|++.+|+|.|..
T Consensus 228 ------~~~~~m~-~aDlal~~-----SGT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 ------DTHKALL-EAEFAFIC-----SGTATLEAALIGTPFVLA 260 (347)
T ss_pred ------cHHHHHH-hhhHHHhc-----CcHHHHHHHHhCCCEEEE
Confidence 3466777 49988866 488888999999999985
No 154
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.69 E-value=1.1 Score=49.51 Aligned_cols=110 Identities=15% Similarity=0.087 Sum_probs=66.6
Q ss_pred CCCcEEEEEeeccCCC--CHH---HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003661 568 RNKPILFTMARLDRVK--NLT---GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 568 ~~k~vIl~vGRL~~~K--gl~---~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~f 642 (805)
+.+.+.+.+|.=++.- +.+ .|++.+..+.+..+ ..+.|..+.... .+..+.|.+.. +-.+.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp-------~~~~~~L~~~~---~~~~~~~~ 213 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP-------PEAEAALRELL---KDNPGVYI 213 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc-------HHHHHHHHHhh---cCCCceEE
Confidence 4555667888633322 223 56666666666554 788888876542 12223333333 23456734
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003661 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG 696 (805)
Q Consensus 643 lG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG 696 (805)
... . ...-+..+|+. +|.++.+.. .-.-+.||.++|+||..-...+
T Consensus 214 ~~~-~---~~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 214 WDG-T---GENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred ecC-C---CCCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 331 1 22346777884 999999844 3345789999999999987766
No 155
>PLN02670 transferase, transferring glycosyl groups
Probab=95.62 E-value=6.3 Score=46.05 Aligned_cols=111 Identities=15% Similarity=0.117 Sum_probs=65.0
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCceEEEECC---
Q 003661 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDP--- 712 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~dg~~G~li~p--- 712 (805)
+.+.+ +++..+++.. . +.++||.- +--++++||+++|+|+|+. +....+..+++-+.|..++.
T Consensus 341 ~vv~~----W~PQ~~IL~H-~-~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~ 410 (472)
T PLN02670 341 MIHVG----WVPQVKILSH-E-SVGGFLTH----CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDER 410 (472)
T ss_pred eEEeC----cCCHHHHhcC-c-ccceeeec----CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeecccc
Confidence 55556 6666776652 1 23346542 1235899999999999996 33344555555678887753
Q ss_pred ---CCHHHHHHHHHHHHHHhhCCH---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003661 713 ---YHGEQAAEILVDFFEKCKADP---SYWDKISLGGLKRIEEKYTWKIYSQRLLTLTG 765 (805)
Q Consensus 713 ---~d~e~lA~aI~~~l~~l~~dp---~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~ 765 (805)
-+.++++++|.+++ .++ +++++. +.-++.+.+.=+-..+++.+++...
T Consensus 411 ~~~~~~e~i~~av~~vm----~~~~g~~~r~~a-~~l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 411 DGSFTSDSVAESVRLAM----VDDAGEEIRDKA-KEMRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred CCcCcHHHHHHHHHHHh----cCcchHHHHHHH-HHHHHHHhCcchhHHHHHHHHHHHH
Confidence 24788888887766 554 333332 2222333344455556666655443
No 156
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=95.54 E-value=0.94 Score=55.22 Aligned_cols=154 Identities=14% Similarity=0.194 Sum_probs=110.2
Q ss_pred CCCcEEEEEeeccCCCCHHHHHHHHHHhHccCC----CeEEEEEeCCCCCCCccHHH-HHHHHHHHHHHH-HcCCC--Cc
Q 003661 568 RNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE----LVNLVVVGGDRRKESKDLEE-QAEMKKMYSLID-QYKLN--GQ 639 (805)
Q Consensus 568 ~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~d~ee-~~e~~~l~~li~-~l~L~--~~ 639 (805)
.++.+|+-+-|++..||+..=+.++.++...+| .+.++.+..+...+..+.++ ..+.......+. +.+-. ..
T Consensus 274 ~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~p 353 (732)
T KOG1050|consen 274 KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQP 353 (732)
T ss_pred cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccce
Confidence 478889999999999999888888888776554 46777777665532222111 222222222222 22211 23
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcC----CcEEEcCccccccccccCceEEEECCCCH
Q 003661 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVNGKSGYHIDPYHG 715 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~G----lPVVat~~GG~~EiI~dg~~G~li~p~d~ 715 (805)
|+++- ..++..++.++++ .+|++...++-+|..++.+|+.+|. .+-|.+..-|..+..+++ ..+++|.|.
T Consensus 354 V~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~--aivvnpw~~ 427 (732)
T KOG1050|consen 354 VHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA--AIVVNPWDG 427 (732)
T ss_pred EEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceEEeeecccccccccc--CEEECCcch
Confidence 44432 3667889999999 4999999999999999999999985 778888888888887554 678899999
Q ss_pred HHHHHHHHHHHH
Q 003661 716 EQAAEILVDFFE 727 (805)
Q Consensus 716 e~lA~aI~~~l~ 727 (805)
++++..|..++.
T Consensus 428 ~~~~~~i~~al~ 439 (732)
T KOG1050|consen 428 DEFAILISKALT 439 (732)
T ss_pred HHHHHHHHHHhh
Confidence 999999987763
No 157
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.45 E-value=1.2 Score=48.33 Aligned_cols=57 Identities=18% Similarity=0.185 Sum_probs=37.7
Q ss_pred CcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003661 663 KGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 663 aDvfV~PS~~E~fGltvlEAMA~GlPVVat~~G---G~~EiI~dg~~G~li~p~d~e~lA~aI~~~l 726 (805)
|++.+- +-|.---||...|+|.|++.-| +.-+... +.|.++..+|+.+..+...+.+
T Consensus 253 a~lvig-----~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 253 ATLVIG-----AGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hheeec-----CCchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 556653 3466678999999999998644 2333332 3688888888876655554433
No 158
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=95.41 E-value=1.3 Score=49.09 Aligned_cols=123 Identities=11% Similarity=0.072 Sum_probs=86.5
Q ss_pred CCcEEEEEeec-cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCC
Q 003661 569 NKPILFTMARL-DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 569 ~k~vIl~vGRL-~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~ 647 (805)
+++.-+-+|+= ++..+.-..++++.+.. ..++++++-=+-+.. ..++++++.+.++++--.+++..+-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~~------n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGAN------NQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCCc------hHHHHHHHHHHHHHhcCccceeEhh---
Confidence 34555566653 56677777777666533 356787765444321 1267888888888876567888764
Q ss_pred CcCChHHHHHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCcccc-ccccccC
Q 003661 648 NRVRNGELYRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGP-AEIIVNG 704 (805)
Q Consensus 648 ~~v~~~el~~~la~aaDvfV~PS-~~E~fGltvlEAMA~GlPVVat~~GG~-~EiI~dg 704 (805)
+.++.+|..++++. +|+.++.. +..|.| +++=.+.+|+||+-+...-. .+..+.+
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~~ 308 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQG 308 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHh-HHHHHHHcCCeEEEecCChHHHHHHhCC
Confidence 48889999999996 99999987 588899 56669999999999855544 4444443
No 159
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=94.91 E-value=10 Score=44.42 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=50.5
Q ss_pred cEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccc-ccCceEEEECC-
Q 003661 639 QFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEII-VNGKSGYHIDP- 712 (805)
Q Consensus 639 ~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~----GG~~EiI-~dg~~G~li~p- 712 (805)
++.+.+ +++..+++..-+ .+.||.- +--++++||+.+|+|+|+... ......+ +.-+.|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 477777 666777766311 2345542 223589999999999999633 3344455 34456777643
Q ss_pred ---CCHHHHHHHHHHHH
Q 003661 713 ---YHGEQAAEILVDFF 726 (805)
Q Consensus 713 ---~d~e~lA~aI~~~l 726 (805)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 36788888887776
No 160
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=94.86 E-value=2.8 Score=44.95 Aligned_cols=146 Identities=17% Similarity=0.091 Sum_probs=80.9
Q ss_pred CCCCcEE---EEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHH----------HHHH
Q 003661 567 DRNKPIL---FTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYS----------LIDQ 633 (805)
Q Consensus 567 ~~~k~vI---l~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~----------li~~ 633 (805)
+..+... .|+||..-.||+..+++.-++..+. +...-++-|-.... +.+.-+.. .+.+
T Consensus 177 d~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~--------A~~~i~d~~~~~~y~~~~~~~~ 247 (355)
T PF11440_consen 177 DVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP--------AKISIKDHGIPYEYYPKLDCDE 247 (355)
T ss_dssp -GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST--------HHHHHHHTT--EEEE-CTGGGG
T ss_pred hhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC--------ceeeeecCCcccccCccccccC
Confidence 4444555 7999999999999999988886654 66777777744221 11111100 0111
Q ss_pred cCC--CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCC------CCCCcHHHHHHHHcCC-cEEEcCccccccc----
Q 003661 634 YKL--NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPAL------YEAFGLTVVEAMTCGL-PTFATCKGGPAEI---- 700 (805)
Q Consensus 634 l~L--~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~------~E~fGltvlEAMA~Gl-PVVat~~GG~~Ei---- 700 (805)
..+ ...+-..| +.-++|....|+. +...++-+. .+..-.+-+|..|||. ||+-+..|....+
T Consensus 248 ~~~~pN~~~~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~ 322 (355)
T PF11440_consen 248 PKPAPNSPVPVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDG 322 (355)
T ss_dssp ---SSS--EEEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTS
T ss_pred cccCCCCcceecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecC
Confidence 111 23466676 6778899999996 555554432 4557789999999995 7777777765542
Q ss_pred ---cccCceEEEECCCCHHHHHHHHHHHH
Q 003661 701 ---IVNGKSGYHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 701 ---I~dg~~G~li~p~d~e~lA~aI~~~l 726 (805)
+.+.-+.+.+|.+|.++..++|.++-
T Consensus 323 ~~~~~~~~~~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 323 TRYIDHPYSAIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp SBGGSS--S-EEE-TTSHHHHHHHHHHHH
T ss_pred ceeeccCcceeEeccchHHHHHHHHHHHh
Confidence 22334567899999999998886653
No 161
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.54 E-value=1.3 Score=47.57 Aligned_cols=140 Identities=19% Similarity=0.271 Sum_probs=80.2
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Q 003661 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 569 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~ 648 (805)
.+-+++++|.=++ ||++. +.++.+.. .++++.||-+..+ .....+++.++. .+++.+.-
T Consensus 158 ~r~ilI~lGGsDp-k~lt~--kvl~~L~~--~~~nl~iV~gs~~---------p~l~~l~k~~~~---~~~i~~~~---- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLTL--KVLAELEQ--KNVNLHIVVGSSN---------PTLKNLRKRAEK---YPNINLYI---- 216 (318)
T ss_pred hheEEEEccCCCh-hhhHH--HHHHHhhc--cCeeEEEEecCCC---------cchhHHHHHHhh---CCCeeeEe----
Confidence 3457888887554 66543 34444433 2367765554322 123455555554 46788764
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEE----cCcccccccccc----CceEEEECCCCHHHHHH
Q 003661 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFA----TCKGGPAEIIVN----GKSGYHIDPYHGEQAAE 720 (805)
Q Consensus 649 ~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVa----t~~GG~~EiI~d----g~~G~li~p~d~e~lA~ 720 (805)
+..+|.++|.+ +|+.+.. -|.|+.||...|+|.++ .+.-..+..... ...|++.. ......
T Consensus 217 --~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l~---~~~~~~ 285 (318)
T COG3980 217 --DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHLK---DLAKDY 285 (318)
T ss_pred --cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCCc---hHHHHH
Confidence 34578999996 8887754 48999999999999333 222222222211 12455532 234444
Q ss_pred HHHHHHHHhhCCHHHHHHHHHHHH
Q 003661 721 ILVDFFEKCKADPSYWDKISLGGL 744 (805)
Q Consensus 721 aI~~~l~~l~~dp~~~~~ms~~ar 744 (805)
.+.+ +..|+..+..++..+.
T Consensus 286 ~~~~----i~~d~~~rk~l~~~~~ 305 (318)
T COG3980 286 EILQ----IQKDYARRKNLSFGSK 305 (318)
T ss_pred HHHH----hhhCHHHhhhhhhccc
Confidence 4433 3478888877766544
No 162
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.37 E-value=1.1 Score=50.27 Aligned_cols=134 Identities=13% Similarity=0.152 Sum_probs=66.7
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCH------HHHH--HHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHH
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNL------TGLV--EWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSL 630 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl------~~Li--eA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~l 630 (805)
++.+|+ +.++.+|+|+-.+...... ...+ +.+. ....+++.+++-.-.. +...
T Consensus 183 ~~~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~li~k~Hp~---------------~~~~ 243 (369)
T PF04464_consen 183 KKKLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLN--FLLKNNYVLIIKPHPN---------------MKKK 243 (369)
T ss_dssp HHHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHH--HHHTTTEEEEE--SHH---------------HHTT
T ss_pred HHHhcc--CCCCcEEEEeeccccccccccccccccccCHHHHH--HHhCCCcEEEEEeCch---------------hhhc
Confidence 455676 6778899999665432221 1222 2222 2233677777665321 1111
Q ss_pred HHH-cCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc--Cc-------cccccc
Q 003661 631 IDQ-YKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT--CK-------GGPAEI 700 (805)
Q Consensus 631 i~~-l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat--~~-------GG~~Ei 700 (805)
... ....++|.+.. +..++..++.. +|++|.= ++-++.|++.+++|||-. +. |...+
T Consensus 244 ~~~~~~~~~~i~~~~------~~~~~~~ll~~-aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~- 310 (369)
T PF04464_consen 244 FKDFKEDNSNIIFVS------DNEDIYDLLAA-ADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD- 310 (369)
T ss_dssp ----TT-TTTEEE-T------T-S-HHHHHHT--SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--
T ss_pred hhhhhccCCcEEECC------CCCCHHHHHHh-cCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-
Confidence 111 34457888875 12368888885 9999963 677999999999999953 33 22233
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHH
Q 003661 701 IVNGKSGYHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 701 I~dg~~G~li~p~d~e~lA~aI~~~l 726 (805)
..+...|-.+. +.+++.++|.+.+
T Consensus 311 ~~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 311 YEEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TTTSSSS-EES--SHHHHHHHHTTHH
T ss_pred hHhhCCCceeC--CHHHHHHHHHhhh
Confidence 22334566664 7899999996655
No 163
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=93.44 E-value=19 Score=41.91 Aligned_cols=142 Identities=17% Similarity=0.162 Sum_probs=71.6
Q ss_pred CCcEEEEEeecc--CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCC-CCccHHHHHHHHHHHHHHHHcCCCCcEEEecC
Q 003661 569 NKPILFTMARLD--RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 645 (805)
Q Consensus 569 ~k~vIl~vGRL~--~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~-~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~ 645 (805)
+..+.++.|.+. +.+.+..+..++..+. .--|+.+.+.... ...+.+............++ ..++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~----~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~--~~~~g~v~~- 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK----RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHE--LEEVGMIVS- 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC----CCeEEEEecCcccccccccccccccccchhHHHh--ccCCeEEEe-
Confidence 355677888765 3445556666666553 2234445432110 00000000000001122222 235556666
Q ss_pred CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEEC-----CCCH
Q 003661 646 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNG-KSGYHID-----PYHG 715 (805)
Q Consensus 646 ~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~dg-~~G~li~-----p~d~ 715 (805)
+++..+++.. . +.++||.- +-.++++||+.+|+|+|+- +....+..+.+. +.|+-+. .-+.
T Consensus 334 ---W~PQ~~iL~h-~-~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~ 404 (455)
T PLN02152 334 ---WCSQIEVLRH-R-AVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVER 404 (455)
T ss_pred ---eCCHHHHhCC-c-ccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcH
Confidence 6666676652 1 12345542 2235899999999999995 333344444441 2455442 1257
Q ss_pred HHHHHHHHHHH
Q 003661 716 EQAAEILVDFF 726 (805)
Q Consensus 716 e~lA~aI~~~l 726 (805)
+++++++.+++
T Consensus 405 e~l~~av~~vm 415 (455)
T PLN02152 405 GEIRRCLEAVM 415 (455)
T ss_pred HHHHHHHHHHH
Confidence 88888887776
No 164
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=93.31 E-value=6.5 Score=41.98 Aligned_cols=112 Identities=9% Similarity=0.035 Sum_probs=65.6
Q ss_pred CCCCcEEEEEeeccCCCCH-----HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHH-cCCCCcE
Q 003661 567 DRNKPILFTMARLDRVKNL-----TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQ-YKLNGQF 640 (805)
Q Consensus 567 ~~~k~vIl~vGRL~~~Kgl-----~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~-l~L~~~V 640 (805)
.+...+-+.+|.-.+.-.+ ..++.++-+..+. ....+++--+...+ +..+++++. +.-..-+
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRTp-----------~~~~s~l~~~l~s~~~i 226 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRTP-----------DTVKSILKNNLNSSPGI 226 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCCc-----------HHHHHHHHhccccCcee
Confidence 4566777888865544333 2233333332221 34677776665432 344555554 4444557
Q ss_pred EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003661 641 RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGP 697 (805)
Q Consensus 641 ~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~ 697 (805)
.|-+.-++.- -...+++ ++|.++.+... =.-..||.++|+||++-.-.+.
T Consensus 227 ~w~~~d~g~N---PY~~~La-~Adyii~TaDS---inM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 227 VWNNEDTGYN---PYIDMLA-AADYIISTADS---INMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred EeCCCCCCCC---chHHHHh-hcceEEEecch---hhhhHHHhccCCCeEEEecCCc
Confidence 7776433332 3456666 59999998652 2235799999999998654443
No 165
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=92.72 E-value=7 Score=41.85 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=61.7
Q ss_pred CCCCcEEEEEeeccCC-------CCHHHHHHHHHHhHccCCCeEEEEEeCCCC-CCCccHHHHHHHHHHHHHHHHc-CCC
Q 003661 567 DRNKPILFTMARLDRV-------KNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQY-KLN 637 (805)
Q Consensus 567 ~~~k~vIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~-~~~~d~ee~~e~~~l~~li~~l-~L~ 637 (805)
..++++|++....... .+...+.+.+..+.+..|+++++|-= .|. ....+ . ....+. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~-------~---~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNK-------Y---SYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCC-------h---hHhhhhhcC-
Confidence 5678889998887553 24456667777777767888877654 332 11000 0 222222 33
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
.++.+... . ..++.++.. +|..+.- .+.+-+||+.+|+||++.
T Consensus 182 ~~~~~~~~---~---~~~~~Ll~~-s~~Vvti-----nStvGlEAll~gkpVi~~ 224 (269)
T PF05159_consen 182 PNVVIIDD---D---VNLYELLEQ-SDAVVTI-----NSTVGLEALLHGKPVIVF 224 (269)
T ss_pred CCeEEECC---C---CCHHHHHHh-CCEEEEE-----CCHHHHHHHHcCCceEEe
Confidence 34444431 2 346677775 6655543 356899999999999995
No 166
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=92.62 E-value=0.35 Score=56.44 Aligned_cols=137 Identities=10% Similarity=0.068 Sum_probs=76.7
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Q 003661 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 569 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~ 648 (805)
+..++++.|.+.. ...+..++.+.+..+..|+ ++++.-++... -.+++++....
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~~--------------------~~l~~n~~~~~---- 329 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGEPP--------------------ENLPKNVLIVK---- 329 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCSHG--------------------CHHHTTEEEES----
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-ccccccccccc--------------------ccccceEEEec----
Confidence 3456788888753 2333333333333333355 66666655320 01235787776
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCceEEEECCC--CHHHHHHHH
Q 003661 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVNGKSGYHIDPY--HGEQAAEIL 722 (805)
Q Consensus 649 ~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~dg~~G~li~p~--d~e~lA~aI 722 (805)
++|..+++.. . ..++||.= |--.++.||+.+|+|+|+- |....+..+++...|...+.. +.+++.++|
T Consensus 330 W~PQ~~lL~h-p-~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai 403 (500)
T PF00201_consen 330 WLPQNDLLAH-P-RVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAI 403 (500)
T ss_dssp S--HHHHHTS-T-TEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHH
T ss_pred cccchhhhhc-c-cceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHH
Confidence 7777676541 1 23566642 2235899999999999996 334455566666678888754 457777777
Q ss_pred HHHHHHhhCCHHHHHHHHH
Q 003661 723 VDFFEKCKADPSYWDKISL 741 (805)
Q Consensus 723 ~~~l~~l~~dp~~~~~ms~ 741 (805)
.+++ +|+.++++..+
T Consensus 404 ~~vl----~~~~y~~~a~~ 418 (500)
T PF00201_consen 404 REVL----ENPSYKENAKR 418 (500)
T ss_dssp HHHH----HSHHHHHHHHH
T ss_pred HHHH----hhhHHHHHHHH
Confidence 6555 78877655444
No 167
>PLN02555 limonoid glucosyltransferase
Probab=92.53 E-value=26 Score=41.07 Aligned_cols=80 Identities=18% Similarity=0.185 Sum_probs=52.0
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC
Q 003661 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVNG-KSGYHID 711 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~----~GG~~EiI~dg-~~G~li~ 711 (805)
.+++...+ +++..+++.. . +.++||.- -| -++++||+.+|+|+|+.. .......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH---CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec---CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45676666 6677777642 1 35677753 22 348999999999999963 33344445454 6777662
Q ss_pred -----C--CCHHHHHHHHHHHH
Q 003661 712 -----P--YHGEQAAEILVDFF 726 (805)
Q Consensus 712 -----p--~d~e~lA~aI~~~l 726 (805)
. -+.+++++++.+++
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm 427 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT 427 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh
Confidence 1 14678888887776
No 168
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=91.56 E-value=0.11 Score=51.30 Aligned_cols=91 Identities=16% Similarity=0.195 Sum_probs=55.5
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEE
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG--------PAEIIVNGKSGYH 709 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG--------~~EiI~dg~~G~l 709 (805)
.+|.+.++.. ++..+|+. +|+.|.- +-+.|+.|++++|+|.|.-...+ ....+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6799998433 37777775 9988874 23579999999999999865555 2222333334444
Q ss_pred ECCC--CHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Q 003661 710 IDPY--HGEQAAEILVDFFEKCKADPSYWDKISLGG 743 (805)
Q Consensus 710 i~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 743 (805)
+... +++.+.++| +.+..++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i----~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAI----EELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHH----HCHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHH----HHHHcCcHHHHHHHHHH
Confidence 3322 356677777 45558888777766654
No 169
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=91.45 E-value=2.8 Score=45.26 Aligned_cols=79 Identities=11% Similarity=0.019 Sum_probs=48.6
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCCcccCC--CChhhhhhcccccc--cchh-hhHhHHHhhcCCEEE
Q 003661 404 GKPDLIIGNYSD-GNIVASLLAHKLGVTQCTIAHALEKTKYP--DSDIYWKNLDDKYH--FSCQ-FTADLIAMNHTDFII 477 (805)
Q Consensus 404 ~kPDIIh~h~~~-~~lva~llar~lgip~v~t~H~l~~~k~~--~s~~~~~~~~~~y~--~~~~-~~~e~~a~~~AD~II 477 (805)
.+.||.|+.... ++++|++++.+.|+|+++|-|+....... -....|-.....++ +... -..-+.++.+||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 467999987765 48899999999999999999996332211 00111110000010 0011 123456899999999
Q ss_pred ecCHH
Q 003661 478 TSTFQ 482 (805)
Q Consensus 478 t~S~~ 482 (805)
+....
T Consensus 251 ~l~~~ 255 (268)
T PF11997_consen 251 PLYEY 255 (268)
T ss_pred ccchh
Confidence 98864
No 170
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.97 E-value=2.7 Score=45.10 Aligned_cols=98 Identities=13% Similarity=0.087 Sum_probs=62.3
Q ss_pred EEEEEeeccCCC--CHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCc
Q 003661 572 ILFTMARLDRVK--NLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 572 vIl~vGRL~~~K--gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~ 649 (805)
+++..|.-.+.| ..+...+.+..+.+. +++++++|+..+ .+...++.+..+....+.+.| .
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e-----------~~~~~~i~~~~~~~~~~~~~~----~ 186 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE-----------RELAEEIAAALGGPRVVNLAG----K 186 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh-----------HHHHHHHHHhcCCCccccCcC----C
Confidence 344444434444 346777777777664 789999987532 233344444443223355566 5
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 650 v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
.+..|+..+++. +|++|.+- + |. +-=|.+.|+|+|+-
T Consensus 187 ~~l~e~~~li~~-~~l~I~~D---s-g~-~HlA~a~~~p~i~l 223 (279)
T cd03789 187 TSLRELAALLAR-ADLVVTND---S-GP-MHLAAALGTPTVAL 223 (279)
T ss_pred CCHHHHHHHHHh-CCEEEeeC---C-HH-HHHHHHcCCCEEEE
Confidence 678999999996 99999873 2 43 33356999999985
No 171
>PLN03004 UDP-glycosyltransferase
Probab=88.02 E-value=6.4 Score=45.76 Aligned_cols=84 Identities=14% Similarity=0.113 Sum_probs=55.9
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcE--EEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEE
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVN-GKSGYHI 710 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDv--fV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~d-g~~G~li 710 (805)
.++...+ +++..+++. ..++ ||.= +--++++||+++|+|+|+. +....+..+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4577776 666777666 3555 5532 2235899999999999995 44445555544 3678777
Q ss_pred CC-----CCHHHHHHHHHHHHHHhhCCHHHHH
Q 003661 711 DP-----YHGEQAAEILVDFFEKCKADPSYWD 737 (805)
Q Consensus 711 ~p-----~d~e~lA~aI~~~l~~l~~dp~~~~ 737 (805)
+. -+.+++++++.+++ .|+++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHH
Confidence 52 26788888887766 6765444
No 172
>PLN02167 UDP-glycosyltransferase family protein
Probab=86.64 E-value=8.9 Score=44.88 Aligned_cols=79 Identities=14% Similarity=0.103 Sum_probs=49.2
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccc-ccccCceEEEECC
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAE-IIVNGKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~----GG~~E-iI~dg~~G~li~p 712 (805)
++....+ +++..+++..= +.++||.- -|++ +++||+++|+|+|+-.. .-... +++.-+.|+.+..
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH---~G~n-S~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSH---CGWN-SVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEee---CCcc-cHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3445556 66777776521 24567753 2333 89999999999999633 33332 2444456776642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 003661 713 ---------YHGEQAAEILVDFF 726 (805)
Q Consensus 713 ---------~d~e~lA~aI~~~l 726 (805)
-+.+++++++.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 25678888887766
No 173
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=86.58 E-value=5.8 Score=43.76 Aligned_cols=102 Identities=15% Similarity=0.077 Sum_probs=62.6
Q ss_pred CCCCcE-EEEEee-ccCCCCHH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEE
Q 003661 567 DRNKPI-LFTMAR-LDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRW 642 (805)
Q Consensus 567 ~~~k~v-Il~vGR-L~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~f 642 (805)
++++++ ++..|. ..+.|... ...+.+..+.+ .+.+++++|+..+ .+...++.+..+ ...+.+
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~ivl~G~~~e-----------~~~~~~i~~~~~-~~~~~l 236 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQVVLFGSAKD-----------HPAGNEIEALLP-GELRNL 236 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEEEEEEChhh-----------HHHHHHHHHhCC-cccccC
Confidence 334444 455554 34566544 67777766654 2478899987632 222233333322 122336
Q ss_pred ecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 643 ISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 643 lG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
.| ..+..++..+++. +|++|.. ++-+ +-=|-|.|+|+|+-
T Consensus 237 ~g----~~sL~el~ali~~-a~l~I~~---DSGp--~HlAaA~~~P~i~l 276 (334)
T TIGR02195 237 AG----ETSLDEAVDLIAL-AKAVVTN---DSGL--MHVAAALNRPLVAL 276 (334)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEee---CCHH--HHHHHHcCCCEEEE
Confidence 66 6788999999996 9999987 3333 33377999999984
No 174
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=86.43 E-value=5 Score=44.76 Aligned_cols=103 Identities=9% Similarity=0.032 Sum_probs=64.3
Q ss_pred CCcEEEEEeeccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCC
Q 003661 569 NKPILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 569 ~k~vIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~ 646 (805)
++.+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ .+.+...++.+.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e---------~e~~~~~~i~~~~~~~~~~~l~g-- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK---------DDLACVNEIAQGCQTPPVTALAG-- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh---------HHHHHHHHHHHhcCCCccccccC--
Confidence 34566677765556654 466666666654 3578888886532 11222333443333223355677
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 647 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 647 ~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
..+..++..+++. ++++|.. ++-+ +-=|-|.|+|+|+-
T Consensus 250 --~~sL~el~ali~~-a~l~v~n---DSGp--~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 --KTTFPELGALIDH-AQLFIGV---DSAP--AHIAAAVNTPLICL 287 (352)
T ss_pred --CCCHHHHHHHHHh-CCEEEec---CCHH--HHHHHHcCCCEEEE
Confidence 6788999999996 9999987 3333 33367899999984
No 175
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=86.14 E-value=31 Score=36.24 Aligned_cols=121 Identities=7% Similarity=-0.028 Sum_probs=64.3
Q ss_pred CcEEEeCCCCCCCcH-HHHHHHHcCCcEEEcCcccccccc-----ccCceEEEE-CCCCHHHHHHHHHHHHHHhhCCHHH
Q 003661 663 KGAFVQPALYEAFGL-TVVEAMTCGLPTFATCKGGPAEII-----VNGKSGYHI-DPYHGEQAAEILVDFFEKCKADPSY 735 (805)
Q Consensus 663 aDvfV~PS~~E~fGl-tvlEAMA~GlPVVat~~GG~~EiI-----~dg~~G~li-~p~d~e~lA~aI~~~l~~l~~dp~~ 735 (805)
+++.+..+--+...- ..-+|.+.|.+|.+.+.....+++ ..|.--+-+ ..+....+|..|++-++.++.+-+.
T Consensus 86 ~~LViaATdD~~vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~ 165 (223)
T PRK05562 86 KHLIVIATDDEKLNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDD 165 (223)
T ss_pred CcEEEECCCCHHHHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHH
Confidence 554444443333333 345667789999887665555544 333222222 2344557777787777777655455
Q ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhchhhhhcchhHHhhhhHHHHHHH
Q 003661 736 WDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYA 790 (805)
Q Consensus 736 ~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~~~~w~~~~~~~~~~~~~y~~~~~~ 790 (805)
+-+.....|..+.+. ..-+++.+....-.+|+.+.+. +...-|.|+|.
T Consensus 166 l~~~l~~~R~~vk~~----~~r~~i~~~l~~~~~~~~l~~~---~~~~~l~~~~~ 213 (223)
T PRK05562 166 FIEYVTKIRNKAKKN----ELKDEIIEFICSDDFYFFYKKG---KANLILSMFYG 213 (223)
T ss_pred HHHHHHHHHHHHHhh----hHHHHHHHHHhChHHHHHHHcc---hHHHHHHHhhh
Confidence 566666677777554 2223333333333455555332 33444555553
No 176
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=85.81 E-value=5.8 Score=41.53 Aligned_cols=103 Identities=16% Similarity=0.091 Sum_probs=59.6
Q ss_pred CCCcEEEEEeeccCCCCHHH--HHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecC
Q 003661 568 RNKPILFTMARLDRVKNLTG--LVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 645 (805)
Q Consensus 568 ~~k~vIl~vGRL~~~Kgl~~--LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~ 645 (805)
.++.+++..|.=.+.|.... ..+.+..+.+.+ ++++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~---------~~~~~~~~~~~~~~-~~~~~~~~- 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE---------QEKEIADQIAAGLQ-NPVINLAG- 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH---------HHHHHHHHHHTTHT-TTTEEETT-
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH---------HHHHHHHHHHHhcc-cceEeecC-
Confidence 34556677776666776544 777777776643 78899998732 11222233333322 12578888
Q ss_pred CCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 646 QMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 646 ~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
..+..++..+++. +|++|.+ ++.+ +-=|.|.|+|+|+-
T Consensus 171 ---~~~l~e~~ali~~-a~~~I~~---Dtg~--~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ---KTSLRELAALISR-ADLVIGN---DTGP--MHLAAALGTPTVAL 208 (247)
T ss_dssp ---TS-HHHHHHHHHT-SSEEEEE---SSHH--HHHHHHTT--EEEE
T ss_pred ---CCCHHHHHHHHhc-CCEEEec---CChH--HHHHHHHhCCEEEE
Confidence 6778999999996 9999987 3333 34488999999995
No 177
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=85.60 E-value=71 Score=36.31 Aligned_cols=88 Identities=17% Similarity=0.271 Sum_probs=54.5
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccc-ccccccc-CceEEE--ECCC
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGG-PAEIIVN-GKSGYH--IDPY 713 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG-~~EiI~d-g~~G~l--i~p~ 713 (805)
.+|.+.. +.. ..++...++. +|++|-.-+ -+++=||+.|+|+|+-..-. ...+.++ |..|+. +.|.
T Consensus 266 ~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~ 335 (385)
T COG2327 266 AEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPL 335 (385)
T ss_pred cceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCC
Confidence 6677764 121 3566668885 888885433 25677999999999963332 2223322 334454 4567
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHH
Q 003661 714 HGEQAAEILVDFFEKCKADPSYWDK 738 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ 738 (805)
|.+.+.+...+.+. .+++.+++
T Consensus 336 ~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 336 DAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred chHHHHHHHHHHHh---ccHHHHhh
Confidence 78888888877664 56665444
No 178
>PLN03015 UDP-glucosyl transferase
Probab=82.35 E-value=1.1e+02 Score=35.91 Aligned_cols=77 Identities=16% Similarity=0.097 Sum_probs=45.5
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccc-ccCceEEEEC---
Q 003661 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEII-VNGKSGYHID--- 711 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~----GG~~EiI-~dg~~G~li~--- 711 (805)
+.+.+ +++..+++.. . +.+.||.- -| -++++||+++|+|+|+-.. .-.+..+ +.-..|.-+.
T Consensus 337 l~v~~----W~PQ~~vL~h-~-~vg~fvtH---~G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~ 406 (470)
T PLN03015 337 LVVTQ----WAPQVEILSH-R-SIGGFLSH---CG-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELP 406 (470)
T ss_pred eEEEe----cCCHHHHhcc-C-ccCeEEec---CC-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccc
Confidence 44555 5666676663 1 23456543 12 3489999999999999633 2233333 3334565552
Q ss_pred ---CCCHHHHHHHHHHHH
Q 003661 712 ---PYHGEQAAEILVDFF 726 (805)
Q Consensus 712 ---p~d~e~lA~aI~~~l 726 (805)
.-..++++++|.+++
T Consensus 407 ~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 407 SEKVIGREEVASLVRKIV 424 (470)
T ss_pred cCCccCHHHHHHHHHHHH
Confidence 125677888887766
No 179
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=82.25 E-value=10 Score=41.93 Aligned_cols=102 Identities=12% Similarity=0.059 Sum_probs=62.5
Q ss_pred CcEEEEEeeccCCCC--HHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCC
Q 003661 570 KPILFTMARLDRVKN--LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQM 647 (805)
Q Consensus 570 k~vIl~vGRL~~~Kg--l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~ 647 (805)
+.+++..|.-.+.|. .+...+.+..+.+ .+.+++++|+..+ .+.+...++.+..+-...+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~---------~e~~~~~~i~~~~~~~~~~~l~g--- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK---------DELAMVNEIAQGCQTPRVTSLAG--- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH---------HHHHHHHHHHhhCCCCcccccCC---
Confidence 345566665445554 4556666666654 3578899986432 11222333333333222344667
Q ss_pred CcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 648 NRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 648 ~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
..+..|+..+++. ++++|.. ++-+ +-=|-|.|+|+|+-
T Consensus 248 -~~sL~el~ali~~-a~l~Vs~---DSGp--~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 -KLTLPQLAALIDH-ARLFIGV---DSVP--MHMAAALGTPLVAL 285 (344)
T ss_pred -CCCHHHHHHHHHh-CCEEEec---CCHH--HHHHHHcCCCEEEE
Confidence 7788999999996 9999987 3333 33488999999984
No 180
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=81.36 E-value=14 Score=40.42 Aligned_cols=99 Identities=12% Similarity=0.022 Sum_probs=63.2
Q ss_pred CCcEEEEEeeccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCC
Q 003661 569 NKPILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 569 ~k~vIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~ 646 (805)
++.+++..|.=.+.|.. +...+.+..+.+. +++++++|+++. +.+...++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~----------e~~~~~~i~~~~~---~~~l~g-- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA----------EKQRAERIAEALP---GAVVLP-- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH----------HHHHHHHHHhhCC---CCeecC--
Confidence 34456666644456655 4666776666542 578888866642 2233344444332 235667
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 647 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 647 ~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
..+..++..+++. ++++|.. ++-++=+ |-|.|+|+|+-
T Consensus 242 --~~sL~el~ali~~-a~l~I~~---DSgp~Hl--Aaa~g~P~i~l 279 (319)
T TIGR02193 242 --KMSLAEVAALLAG-ADAVVGV---DTGLTHL--AAALDKPTVTL 279 (319)
T ss_pred --CCCHHHHHHHHHc-CCEEEeC---CChHHHH--HHHcCCCEEEE
Confidence 6788999999996 9999987 3333333 66889999984
No 181
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=80.53 E-value=10 Score=38.13 Aligned_cols=64 Identities=22% Similarity=0.234 Sum_probs=43.6
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHc------CCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEE
Q 003661 403 QGKPDLIIGNYSDGNIVASLLAHKL------GVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFI 476 (805)
Q Consensus 403 ~~kPDIIh~h~~~~~lva~llar~l------gip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~I 476 (805)
+.+||+|++|.+..+....++++.+ |+++|++-- ....+ ..| ..-++.+.-||..
T Consensus 90 r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES-~aRv~---------------~lS---lTGklly~~aD~f 150 (170)
T PF08660_consen 90 RERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES-FARVK---------------TLS---LTGKLLYPFADRF 150 (170)
T ss_pred HhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe-eeecC---------------CCc---hHHHHHHHhCCEE
Confidence 3479999999999888888888888 888876421 10000 000 1234567789999
Q ss_pred EecCHHHHh
Q 003661 477 ITSTFQEIA 485 (805)
Q Consensus 477 It~S~~~~~ 485 (805)
++-.++.++
T Consensus 151 ~VQW~~l~~ 159 (170)
T PF08660_consen 151 IVQWEELAE 159 (170)
T ss_pred EEcCHHHHh
Confidence 998887665
No 182
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=80.40 E-value=84 Score=33.98 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCc
Q 003661 585 LTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKG 664 (805)
Q Consensus 585 l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaD 664 (805)
+..+++++..+.+.. +.+++++.-... .| .+..+++.+.+.-+..| +. ..+..|+...++. ++
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~---~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~~ 252 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP---QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-AR 252 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc---hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-CC
Confidence 456677777665542 456656553321 11 22334444444323333 23 4567899999996 99
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 665 AFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 665 vfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
++|...++ ..+=|+.+|+|+++-
T Consensus 253 ~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 253 LVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred EEEEechH-----HHHHHHHcCCCEEEe
Confidence 88865542 567799999999975
No 183
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=80.15 E-value=3.8 Score=36.98 Aligned_cols=84 Identities=13% Similarity=0.176 Sum_probs=57.6
Q ss_pred EEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHH--HHHHHHccCcEEEeCCCCCCCc---HH
Q 003661 604 LVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGE--LYRYICDTKGAFVQPALYEAFG---LT 678 (805)
Q Consensus 604 LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~e--l~~~la~aaDvfV~PS~~E~fG---lt 678 (805)
++|||+..+ ....+++.++++|. .+.++|... .....+ +...+.+ +|+.|++..+=+.. .+
T Consensus 2 vliVGG~~~----------~~~~~~~~~~~~G~--~~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~v 67 (97)
T PF10087_consen 2 VLIVGGRED----------RERRYKRILEKYGG--KLIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWKV 67 (97)
T ss_pred EEEEcCCcc----------cHHHHHHHHHHcCC--EEEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHHH
Confidence 678888432 24678889999886 445554322 233334 8888885 99999988755544 34
Q ss_pred HHHHHHcCCcEEEcCcccccccc
Q 003661 679 VVEAMTCGLPTFATCKGGPAEII 701 (805)
Q Consensus 679 vlEAMA~GlPVVat~~GG~~EiI 701 (805)
--+|-..|+|++.++..|...+.
T Consensus 68 k~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 68 KKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHcCCcEEEECCCCHHHHH
Confidence 56788899999999877665543
No 184
>PLN02764 glycosyltransferase family protein
Probab=78.93 E-value=71 Score=37.24 Aligned_cols=77 Identities=10% Similarity=0.076 Sum_probs=49.7
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc-CceEEEECC--
Q 003661 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKG----GPAEIIVN-GKSGYHIDP-- 712 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~G----G~~EiI~d-g~~G~li~p-- 712 (805)
+...+ +++..+++.. . +.++||.- +--++++||+++|+|+|+-... ..+..+.+ -..|+.+.+
T Consensus 319 ~v~~~----W~PQ~~vL~h-~-~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~ 388 (453)
T PLN02764 319 VVWGG----WVQQPLILSH-P-SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREE 388 (453)
T ss_pred cEEeC----CCCHHHHhcC-c-ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEecccc
Confidence 55555 6777777763 1 24567753 2235899999999999996443 34445533 356766532
Q ss_pred ---CCHHHHHHHHHHHH
Q 003661 713 ---YHGEQAAEILVDFF 726 (805)
Q Consensus 713 ---~d~e~lA~aI~~~l 726 (805)
-+.+++++++.+++
T Consensus 389 ~~~~~~e~i~~av~~vm 405 (453)
T PLN02764 389 TGWFSKESLRDAINSVM 405 (453)
T ss_pred CCccCHHHHHHHHHHHh
Confidence 26788888887766
No 185
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=78.44 E-value=18 Score=40.23 Aligned_cols=98 Identities=16% Similarity=0.114 Sum_probs=67.0
Q ss_pred CcEEEEEe-eccCCCCHH--HHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCC
Q 003661 570 KPILFTMA-RLDRVKNLT--GLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 570 k~vIl~vG-RL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~ 646 (805)
+-+++..| .-...|+.. ...+.+..+...+ .++++.|+. + +.+...++.+.++ +.+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~-~----------e~e~~~~i~~~~~--~~~~l~~-- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGP-D----------EEERAEEIAKGLP--NAVILAG-- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecCh-H----------HHHHHHHHHHhcC--CccccCC--
Confidence 45566777 555666654 6777777777654 899999987 2 2344455555543 2233666
Q ss_pred CCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 647 MNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 647 ~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
..+..++..+++. ||++|.+.. |.+ -=|-|.|+|+|+-
T Consensus 239 --k~sL~e~~~li~~-a~l~I~~DS----g~~-HlAaA~~~P~I~i 276 (334)
T COG0859 239 --KTSLEELAALIAG-ADLVIGNDS----GPM-HLAAALGTPTIAL 276 (334)
T ss_pred --CCCHHHHHHHHhc-CCEEEccCC----hHH-HHHHHcCCCEEEE
Confidence 7888999999996 999998743 333 3378899999995
No 186
>PLN00164 glucosyltransferase; Provisional
Probab=77.25 E-value=36 Score=39.99 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=47.2
Q ss_pred EEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCceEEEECC--
Q 003661 640 FRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VNGKSGYHIDP-- 712 (805)
Q Consensus 640 V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI-~dg~~G~li~p-- 712 (805)
+.+.+ +++..+++..= +.++||.= -|+ ++++||+++|+|+|+- +..-....+ +.-+.|+-++.
T Consensus 341 ~~v~~----w~PQ~~iL~h~--~vg~fvtH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~ 410 (480)
T PLN00164 341 LVWPT----WAPQKEILAHA--AVGGFVTH---CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDR 410 (480)
T ss_pred eEEee----cCCHHHHhcCc--ccCeEEee---ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccc
Confidence 55555 56666666621 12355542 233 4899999999999995 333344334 33357776632
Q ss_pred -----CCHHHHHHHHHHHH
Q 003661 713 -----YHGEQAAEILVDFF 726 (805)
Q Consensus 713 -----~d~e~lA~aI~~~l 726 (805)
-+.++++++|.+++
T Consensus 411 ~~~~~~~~e~l~~av~~vm 429 (480)
T PLN00164 411 KRDNFVEAAELERAVRSLM 429 (480)
T ss_pred ccCCcCcHHHHHHHHHHHh
Confidence 25678888887766
No 187
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=75.94 E-value=33 Score=40.90 Aligned_cols=193 Identities=15% Similarity=0.116 Sum_probs=120.5
Q ss_pred hhhhccccCCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC-
Q 003661 559 KEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN- 637 (805)
Q Consensus 559 ~~~~G~l~~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~- 637 (805)
|..+|+ +.+..++...-.+ .|=-...++.|.++.+.-|+..|++.--..- -...++..+.+.|++
T Consensus 750 r~~y~L--p~d~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~----------ge~rf~ty~~~~Gl~p 815 (966)
T KOG4626|consen 750 RSQYGL--PEDAVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV----------GEQRFRTYAEQLGLEP 815 (966)
T ss_pred CCCCCC--CCCeEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEecccc----------chHHHHHHHHHhCCCc
Confidence 455777 5565555555444 3333567788888888889888887654321 125788899999996
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccc-----cccCceEEEECC
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEI-----IVNGKSGYHIDP 712 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~Ei-----I~dg~~G~li~p 712 (805)
++|.|... ...+|=.+-.. -+||.+-+-.+-|.- |-.|.+.+|+|+|.-...-.+.- +..-..|-++.
T Consensus 816 ~riifs~v----a~k~eHvrr~~-LaDv~LDTplcnGhT-Tg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia- 888 (966)
T KOG4626|consen 816 DRIIFSPV----AAKEEHVRRGQ-LADVCLDTPLCNGHT-TGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA- 888 (966)
T ss_pred cceeeccc----cchHHHHHhhh-hhhhcccCcCcCCcc-cchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh-
Confidence 67888863 22344444444 378888776665543 56789999999997422211111 11112333443
Q ss_pred CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHHhchhhhhcchhH
Q 003661 713 YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI--EEKYTWKIYSQRLLTLTGVYGFWKHVSNLDR 778 (805)
Q Consensus 713 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v--~~~ysw~~~a~~ll~Ly~~~~~w~~~~~~~~ 778 (805)
.+-++..+.-.+ +..|.+..+++...-+..- .--|+-..++..++.+|.. .|+.-.+-+.
T Consensus 889 k~~eEY~~iaV~----Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~--MW~~y~~G~~ 950 (966)
T KOG4626|consen 889 KNREEYVQIAVR----LATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQ--MWKKYCSGEV 950 (966)
T ss_pred hhHHHHHHHHHH----hhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHH--HHHHhccCCC
Confidence 356666655533 4478888887766554432 2348999999999999965 7876554333
No 188
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=74.51 E-value=25 Score=38.59 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=59.1
Q ss_pred EEEEEeeccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCc
Q 003661 572 ILFTMARLDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 572 vIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~ 649 (805)
+++..|.-.+.|.. +...+.+..+.+ .+.++++.|+++. +.+...++.+. ...+.+.| .
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~--~~~~ivl~~G~~~----------e~~~~~~i~~~---~~~~~l~g----~ 241 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAP--SGLRIKLPWGAEH----------EEQRAKRLAEG---FPYVEVLP----K 241 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHH--CCCeEEEeCCCHH----------HHHHHHHHHcc---CCcceecC----C
Confidence 33444433344543 366677766654 2567777654532 22233333332 23466777 6
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 650 v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
.+..|+..+++. +|++|..-. | .+-=|-|+|+|+|+-
T Consensus 242 ~sL~elaali~~-a~l~I~nDS----G-p~HlA~A~g~p~val 278 (322)
T PRK10964 242 LSLEQVARVLAG-AKAVVSVDT----G-LSHLTAALDRPNITL 278 (322)
T ss_pred CCHHHHHHHHHh-CCEEEecCC----c-HHHHHHHhCCCEEEE
Confidence 788999999996 999998732 2 334488999999994
No 189
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=70.17 E-value=23 Score=35.11 Aligned_cols=59 Identities=19% Similarity=0.160 Sum_probs=35.7
Q ss_pred CCceEEEEcCCCchHH-HH-HHHHH-c-CCcEEEEecCCCc-ccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEe
Q 003661 404 GKPDLIIGNYSDGNIV-AS-LLAHK-L-GVTQCTIAHALEK-TKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIIT 478 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lv-a~-llar~-l-gip~v~t~H~l~~-~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt 478 (805)
.+||+|+|.++..+.+ .. +..+. . .+|+++.+-++.. .. . +.-..+|..++
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~------~------------------W~~~~~D~y~V 143 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP------F------------------WIHPGVDRYFV 143 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc------C------------------eecCCCCEEEE
Confidence 5799999988875433 33 33333 3 4776644443311 10 1 23458899999
Q ss_pred cCHHHHhh
Q 003661 479 STFQEIAG 486 (805)
Q Consensus 479 ~S~~~~~~ 486 (805)
.|++.++.
T Consensus 144 ase~~~~~ 151 (169)
T PF06925_consen 144 ASEEVKEE 151 (169)
T ss_pred CCHHHHHH
Confidence 99887763
No 190
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=68.97 E-value=33 Score=38.07 Aligned_cols=99 Identities=13% Similarity=0.021 Sum_probs=59.6
Q ss_pred cEEEEEee-ccCCCCH--HHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC--Cc-EEEec
Q 003661 571 PILFTMAR-LDRVKNL--TGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN--GQ-FRWIS 644 (805)
Q Consensus 571 ~vIl~vGR-L~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~--~~-V~flG 644 (805)
.+++..|. ..+.|.. +...+.+..+.+ .+++++++|+..+ .+...++.+..+-. .+ +.+.|
T Consensus 182 ~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e-----------~~~~~~i~~~~~~~~~~~~~~l~g 248 (348)
T PRK10916 182 IIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD-----------HEAGNEILAALNTEQQAWCRNLAG 248 (348)
T ss_pred EEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh-----------HHHHHHHHHhcccccccceeeccC
Confidence 34456654 2345543 355666655543 3678888887632 22233333333211 12 45556
Q ss_pred CCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 645 SQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 645 ~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
..+..++..+++. ++++|..- +-+ +==|-|.|+|+|+-
T Consensus 249 ----~~sL~el~ali~~-a~l~I~nD---TGp--~HlAaA~g~P~val 286 (348)
T PRK10916 249 ----ETQLEQAVILIAA-CKAIVTND---SGL--MHVAAALNRPLVAL 286 (348)
T ss_pred ----CCCHHHHHHHHHh-CCEEEecC---ChH--HHHHHHhCCCEEEE
Confidence 6678999999996 99999863 322 33488899999983
No 191
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=68.63 E-value=68 Score=34.62 Aligned_cols=152 Identities=15% Similarity=0.159 Sum_probs=83.5
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCc
Q 003661 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 570 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~ 649 (805)
.+.++.++.=.+.|+++.|++++++.+. .+++-..|.|.. ..-....+.+..|++ ++++++...
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~----------~hl~~~~l~~~~G~~--~~~Vpy~G~- 141 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS----------DHLAAALLAKAAGIK--FTHVPYDGG- 141 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH----------HHHHHHHHHHHHT-----EEEE-SSH-
T ss_pred cceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch----------HHHHHHHHHHHhCCc--eEEEEeCCc-
Confidence 3566777776789999999999876532 244443333321 011234556677763 444443222
Q ss_pred CChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-cEEE-c---Ccc-----------ccccccccCceEEEECCC
Q 003661 650 VRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFA-T---CKG-----------GPAEIIVNGKSGYHIDPY 713 (805)
Q Consensus 650 v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~Gl-PVVa-t---~~G-----------G~~EiI~dg~~G~li~p~ 713 (805)
.+.+..++....|+.+.. .-......-.|. -+++ + +.. |..++....-.|+..+++
T Consensus 142 --~~~~~allgG~vd~~~~~------~~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E~G~~d~~~~~~~g~~~p~g 213 (274)
T PF03401_consen 142 --AEALTALLGGHVDAAFGS------PGEALPYVEAGDLKPLAVFSDERSPALPDVPTFKEQGYPDIVFGSWRGLFAPKG 213 (274)
T ss_dssp --HHHHHHHHTTSSSEEEEE------HHHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTTTT-TTG--EEEEEEEEETT
T ss_pred --cHHHHHHhCCeeeEEeec------HHHHHHHHhCCCceEEEEecCccccccCCCCCHHHhCccceeeeeeeeeecCCC
Confidence 345666666666776653 123334444442 1122 1 111 122333333468899999
Q ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 003661 714 HGEQAAEILVDFFEKCKADPSYWDKISLGGLK 745 (805)
Q Consensus 714 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~ 745 (805)
.+++..+++.+.+.+..+||+..+.+.+.+..
T Consensus 214 tp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~~ 245 (274)
T PF03401_consen 214 TPDEIVDKLADAIKKALEDPEFQEFLEKMGLE 245 (274)
T ss_dssp S-HHHHHHHHHHHHHHHT-HHHHHHHHHHTEE
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHCCCc
Confidence 99999999999999999999987766665543
No 192
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=66.96 E-value=55 Score=33.67 Aligned_cols=38 Identities=13% Similarity=0.178 Sum_probs=25.9
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLP 340 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~ 340 (805)
|||++..-.|+-. ..+. .|++.|++.||+|. |+++...
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDSE 38 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESSS
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCCC
Confidence 7999998888722 2234 56677877789999 9987643
No 193
>PLN02207 UDP-glycosyltransferase
Probab=65.88 E-value=2.5e+02 Score=32.87 Aligned_cols=79 Identities=15% Similarity=0.127 Sum_probs=49.1
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CceEEEEC-
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVN-GKSGYHID- 711 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~----~GG~~EiI~d-g~~G~li~- 711 (805)
+++...+ +++..+++..= +.+.||.- -|+ ++++||+.+|+|+|+-. ....+..+.+ -+.|+-+.
T Consensus 332 ~~g~i~~----W~PQ~~IL~H~--~vg~FvTH---~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~ 401 (468)
T PLN02207 332 GRGMICG----WSPQVEILAHK--AVGGFVSH---CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKL 401 (468)
T ss_pred CCeEEEE----eCCHHHHhccc--ccceeeec---Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEec
Confidence 4555556 67777777642 24456642 222 48899999999999963 3334443333 44565331
Q ss_pred --------CCCHHHHHHHHHHHH
Q 003661 712 --------PYHGEQAAEILVDFF 726 (805)
Q Consensus 712 --------p~d~e~lA~aI~~~l 726 (805)
.-+.++++++|.+++
T Consensus 402 ~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 402 DYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred ccccccCCcccHHHHHHHHHHHH
Confidence 126688999998877
No 194
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=65.63 E-value=30 Score=35.14 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=29.4
Q ss_pred CceEEEEcCCCc--hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 405 KPDLIIGNYSDG--NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 405 kPDIIh~h~~~~--~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
+||+++...... |++. .+++.|+|++..---+.... ...|+.+ .. .-+..++..|.|.+.|+.
T Consensus 95 ~P~~~i~~EtElWPnll~--~a~~~~ip~~LvNarls~~s----~~~~~~~-------~~--~~r~~l~~f~~i~aqs~~ 159 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLR--EAKRRGIPVVLVNARLSERS----FRRYRRF-------PF--LFRPLLSRFDRILAQSEA 159 (186)
T ss_dssp --SEEEEES----HHHHH--H-----S-EEEEEE-------------------------H--HHHHHGGG-SEEEESSHH
T ss_pred CCCEEEEEccccCHHHHH--HHhhcCCCEEEEeeeecccc----chhhhhh-------HH--HHHHHHHhCCEEEECCHH
Confidence 599988765543 4443 45677999876433221111 1111111 11 123467889999999998
Q ss_pred HHhhccc
Q 003661 483 EIAGSKD 489 (805)
Q Consensus 483 ~~~~~~~ 489 (805)
.++.+..
T Consensus 160 da~r~~~ 166 (186)
T PF04413_consen 160 DAERFRK 166 (186)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8875433
No 195
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=65.07 E-value=22 Score=35.53 Aligned_cols=110 Identities=12% Similarity=0.107 Sum_probs=53.7
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCCcccCCCChhhhhhcccccccchhhhHhHHHhhcCCEEEecCHH
Q 003661 404 GKPDLIIGNYSDG-NIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQ 482 (805)
Q Consensus 404 ~kPDIIh~h~~~~-~lva~llar~lgip~v~t~H~l~~~k~~~s~~~~~~~~~~y~~~~~~~~e~~a~~~AD~IIt~S~~ 482 (805)
..+|+|.+..-.. +-+..+.-...++|.++-+|.-.. .||.+...-... .|.+ ......-.||.|+.+|..
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~--~~~~-----~ni~saLaAD~v~FNS~~ 129 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDF--QYGM-----NNIYSALAADRVVFNSAF 129 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCccccc--cHHH-----HHHHHHHhceeeeecchh
Confidence 4689999875432 222222223457899999996322 244332111111 1111 122344589999999976
Q ss_pred HHhhccccccccccccccccccceeeecCCCCCCCcEEEecCCc
Q 003661 483 EIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA 526 (805)
Q Consensus 483 ~~~~~~~~~gqy~~~~~f~~p~l~~~~~gi~~~~~ki~VIpnGv 526 (805)
-.+.+-+.+.++.. .||+..- ..-++...+|..|+|.|+
T Consensus 130 nr~sFL~~~~~fL~----~~PD~~p-~~~~~~I~~Ks~VL~~pi 168 (168)
T PF12038_consen 130 NRDSFLDGIPSFLK----RMPDHRP-KGLVERIRAKSQVLPVPI 168 (168)
T ss_pred hHHHHHHHHHHHHH----HCCCCCc-hhHHHHHhccCeecCCCC
Confidence 55443333333322 1232111 011112245777887764
No 196
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=62.42 E-value=74 Score=35.75 Aligned_cols=162 Identities=12% Similarity=0.143 Sum_probs=103.3
Q ss_pred hhcccc-CCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCC-eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCC--
Q 003661 561 HLCVLK-DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLREL-VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKL-- 636 (805)
Q Consensus 561 ~~G~l~-~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~-v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L-- 636 (805)
++|.-. .+.+.+-++=-+++-.|+-..=+=+..+.-+..|+ +..+.|-..... .+-..+...+..+.+
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~~--------ke~~~F~~f~~~ldlvr 251 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYHL--------KEHPTFVNFANSLDLVR 251 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchhh--------hcCHHHHHHHHhhHHhh
Confidence 456532 23444555555666677644322222222223343 566666655431 122445556665555
Q ss_pred CCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003661 637 NGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGE 716 (805)
Q Consensus 637 ~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e 716 (805)
++...|-| +. +++.++++-.|+.|.-.+.-+.-..-.||+.-|=|.|-.. ..+.+ .|+.++-.|..
T Consensus 252 ~gkasfeg----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~d--~GYYY~~fD~~ 317 (364)
T PF10933_consen 252 DGKASFEG----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLKD--VGYYYPDFDAF 317 (364)
T ss_pred cCeeEEee----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCc-----chhcc--cCcCCCCccHH
Confidence 57788988 53 4677777788999988777778888999999999998742 23433 79999988999
Q ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003661 717 QAAEILVDFFEKCKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 717 ~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v 747 (805)
+=+++|.+++. +.++.++...+++++.+
T Consensus 318 ~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l 345 (364)
T PF10933_consen 318 EGARQLLRAIR---EHDADLDAYRARARRLL 345 (364)
T ss_pred HHHHHHHHHHH---HccccHHHHHHHHHHHH
Confidence 99999987764 45555666666666655
No 197
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=62.38 E-value=1.9e+02 Score=33.58 Aligned_cols=159 Identities=11% Similarity=0.102 Sum_probs=83.2
Q ss_pred CcEEEEEeeccC-----CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC--CCCcEEE
Q 003661 570 KPILFTMARLDR-----VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK--LNGQFRW 642 (805)
Q Consensus 570 k~vIl~vGRL~~-----~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~--L~~~V~f 642 (805)
.-++++.|.+.. .+-...++.+++++ +++.|+++=..... .. +.+... ..++|..
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~-----------~~---~~~~~~~~~~~nV~~ 339 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS-----------IY---FPEGLPNRGRGNVVL 339 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc-----------hh---hhhcCCCCCcCceEE
Confidence 556677777753 34444555555544 56676666554321 00 222221 2457888
Q ss_pred ecCCCCcCChHHHHHHHHc-cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc----Cccccccccc-cCceEEEECCCCH-
Q 003661 643 ISSQMNRVRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIV-NGKSGYHIDPYHG- 715 (805)
Q Consensus 643 lG~~~~~v~~~el~~~la~-aaDvfV~PS~~E~fGltvlEAMA~GlPVVat----~~GG~~EiI~-dg~~G~li~p~d~- 715 (805)
.+ +++..++. ++. +.++||. +-|++ +++||..+|+|+|+. +..-.+..+. +|..|.+. ..+.
T Consensus 340 ~~----W~PQ~~ll--l~H~~v~~FvT---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~-~~~~~ 408 (496)
T KOG1192|consen 340 SK----WAPQNDLL--LDHPAVGGFVT---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD-KRDLV 408 (496)
T ss_pred ec----CCCcHHHh--cCCCcCcEEEE---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe-hhhcC
Confidence 77 66666765 222 2345553 24455 459999999999964 3333444444 44444443 3222
Q ss_pred -HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003661 716 -EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 762 (805)
Q Consensus 716 -e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~ 762 (805)
..+.+++..++ .++++.+...+-+...-.+..+- ..+..+.+
T Consensus 409 ~~~~~~~~~~il----~~~~y~~~~~~l~~~~~~~p~~~-~~~~~~~e 451 (496)
T KOG1192|consen 409 SEELLEAIKEIL----ENEEYKEAAKRLSEILRDQPISP-ELAVKWVE 451 (496)
T ss_pred cHHHHHHHHHHH----cChHHHHHHHHHHHHHHcCCCCH-HHHHHHHH
Confidence 22566665554 78877665555444333333444 44443333
No 198
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=62.25 E-value=2e+02 Score=29.74 Aligned_cols=126 Identities=11% Similarity=-0.033 Sum_probs=63.5
Q ss_pred HHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCcccccccc-----ccCceEEEE-CCCCHHHHHHHHHHHHHHhhC
Q 003661 659 ICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAEII-----VNGKSGYHI-DPYHGEQAAEILVDFFEKCKA 731 (805)
Q Consensus 659 la~aaDvfV~PS~-~E~fGltvlEAMA~GlPVVat~~GG~~EiI-----~dg~~G~li-~p~d~e~lA~aI~~~l~~l~~ 731 (805)
+.+ +++++...- .|-.--...+|-..|+||-+.+.....+++ ..|.--+-+ ..+....++..|++-++.++.
T Consensus 67 l~~-~~lVi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~ 145 (205)
T TIGR01470 67 LEG-AFLVIAATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLP 145 (205)
T ss_pred hCC-cEEEEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcc
Confidence 443 666554433 223334566777899999776655544444 334322222 234456777778777766654
Q ss_pred -CHHHHHHHHHHHHHHHHHhCCHHHHHHH-HHHHHHHhchhhhhcchhHHhhhhHHH
Q 003661 732 -DPSYWDKISLGGLKRIEEKYTWKIYSQR-LLTLTGVYGFWKHVSNLDRLESRRYLE 786 (805)
Q Consensus 732 -dp~~~~~ms~~ar~~v~~~ysw~~~a~~-ll~Ly~~~~~w~~~~~~~~~~~~~y~~ 786 (805)
+-..+.++....|..+.+...-..--++ |..++ --.++..+.+-...+..++++
T Consensus 146 ~~~~~~~~~~~~~R~~~k~~~~~~~~r~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~ 201 (205)
T TIGR01470 146 PSLGDLATLAATWRDAVKKRLPNGAARRRFWEKFF-DGAFAERVLAGREEQAERVLA 201 (205)
T ss_pred hhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHh-ccHHHHHHHcCCHHHHHHHHH
Confidence 2344445555666666554332211111 12222 123555555544555555544
No 199
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=56.68 E-value=2.9e+02 Score=30.94 Aligned_cols=125 Identities=8% Similarity=-0.039 Sum_probs=71.1
Q ss_pred CCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHH----HHHHccCcEEEeCC--CCC
Q 003661 600 ELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELY----RYICDTKGAFVQPA--LYE 673 (805)
Q Consensus 600 ~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~----~~la~aaDvfV~PS--~~E 673 (805)
.+.+++++|.|.- -+...+...+.|. .+|.+...+....+.++++ .+... +|+.+..| .--
T Consensus 173 ~~k~vLvIGaGem-----------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Tas 239 (338)
T PRK00676 173 KKASLLFIGYSEI-----------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESAY 239 (338)
T ss_pred cCCEEEEEcccHH-----------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCCC
Confidence 4679999999821 1222233334454 4688887655555666665 55664 89999853 333
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q 003661 674 AFGLTVVEAMTCGLPTFATCKGGPAEIIV--NGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRI 747 (805)
Q Consensus 674 ~fGltvlEAMA~GlPVVat~~GG~~EiI~--dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v 747 (805)
+.|....|.+..-.+-+.-|..-|+++=. ...+-.++ |.+++.+.+. .|-..|++....+...+
T Consensus 240 ~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~-------~n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 240 AFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQ-------KHLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 35555555554322246667777777631 12223344 5677666653 34455555555565555
No 200
>PLN02534 UDP-glycosyltransferase
Probab=55.57 E-value=3.1e+02 Score=32.43 Aligned_cols=77 Identities=9% Similarity=0.076 Sum_probs=46.0
Q ss_pred CcEEEecCCCCcCChHHHHHHHHccCcE--EEeCCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccc-cCceEEEE
Q 003661 638 GQFRWISSQMNRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCKGG----PAEIIV-NGKSGYHI 710 (805)
Q Consensus 638 ~~V~flG~~~~~v~~~el~~~la~aaDv--fV~PS~~E~fGltvlEAMA~GlPVVat~~GG----~~EiI~-dg~~G~li 710 (805)
.++.+.| +++..+++. ..++ ||.- +-.++++||+++|+|+|+-...+ ....+. .-+.|+-+
T Consensus 344 ~g~~v~~----w~pq~~iL~----h~~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~ 411 (491)
T PLN02534 344 RGLLIKG----WAPQVLILS----HPAIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRV 411 (491)
T ss_pred CCeeccC----CCCHHHHhc----CCccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEe
Confidence 4566666 666666665 3444 6643 33469999999999999964422 222222 21233322
Q ss_pred C---------------CCCHHHHHHHHHHHH
Q 003661 711 D---------------PYHGEQAAEILVDFF 726 (805)
Q Consensus 711 ~---------------p~d~e~lA~aI~~~l 726 (805)
. --+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 412 GVEVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccccCccCHHHHHHHHHHHh
Confidence 1 025678888887776
No 201
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=55.45 E-value=2.2e+02 Score=28.68 Aligned_cols=37 Identities=19% Similarity=0.501 Sum_probs=25.7
Q ss_pred cCCCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCcee
Q 003661 272 RIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDIT 329 (805)
Q Consensus 272 ~~~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~ 329 (805)
+++|.|||.|-.+ |.. |-...+. .+++.|.+.|+.|.
T Consensus 1 ~~~~~mki~ITG~------------PGv-GKtTl~~--------ki~e~L~~~g~kvg 37 (179)
T COG1618 1 MIKMAMKIFITGR------------PGV-GKTTLVL--------KIAEKLREKGYKVG 37 (179)
T ss_pred CCCcceEEEEeCC------------CCc-cHHHHHH--------HHHHHHHhcCceee
Confidence 3678999987532 222 4455555 78888999999876
No 202
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=54.80 E-value=12 Score=38.02 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=27.2
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~ 339 (805)
|||+||+..|+.| ++++++..++||+|+ -++|..
T Consensus 1 mKIaiIgAsG~~G-------------------------s~i~~EA~~RGHeVT----AivRn~ 34 (211)
T COG2910 1 MKIAIIGASGKAG-------------------------SRILKEALKRGHEVT----AIVRNA 34 (211)
T ss_pred CeEEEEecCchhH-------------------------HHHHHHHHhCCCeeE----EEEeCh
Confidence 7999999888743 156778899999999 888764
No 203
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=52.76 E-value=2.1e+02 Score=31.66 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=60.3
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCC--CCCCcccc--ceeeecCccCeEEEEeccCcCCccccc
Q 003661 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPD--AVGTTCGQ--RLEKVYGTKYSDILRVPFRTEKGVVRK 376 (805)
Q Consensus 301 G~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~--~~g~~~~~--~~e~i~~~~~v~Ilrvp~~~~~~~l~~ 376 (805)
|-...+. .|...|.++||.|- |++-..+. ..|.--+. +.......+|+.|-.+|.++..|
T Consensus 63 GKSTli~--------~L~~~l~~~G~rVa----VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG---- 126 (323)
T COG1703 63 GKSTLIE--------ALGRELRERGHRVA----VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG---- 126 (323)
T ss_pred chHHHHH--------HHHHHHHHCCcEEE----EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch----
Confidence 4555566 77788899999999 66544332 23332222 33444445677777777765433
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003661 377 WISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 377 ~isr~~i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l 438 (805)
.+..-+.++...+- ...+|+|+.-....+-.=.-++....+-++++..+.
T Consensus 127 ---------GlS~at~~~i~~ld---AaG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 127 ---------GLSRATREAIKLLD---AAGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred ---------hhhHHHHHHHHHHH---hcCCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 11222223332222 246999998765543322334444556666666654
No 204
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=49.50 E-value=3e+02 Score=28.06 Aligned_cols=95 Identities=13% Similarity=0.094 Sum_probs=54.1
Q ss_pred CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHc
Q 003661 582 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD 661 (805)
Q Consensus 582 ~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~ 661 (805)
..-.+.+.+.+..+.+......++.+....... ................++..... ..+..++..+++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 257 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDE--------DDDDFNEIDIKAEKFFNVIIIDY---SLSPDELLELISQ 257 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccchh--------hHHHHHhhhhhcccccceeEecC---CCCHHHHHHHHhc
Confidence 334555666666666644445555555443310 00111111100222334444442 5567899999995
Q ss_pred cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcC
Q 003661 662 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATC 693 (805)
Q Consensus 662 aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~ 693 (805)
++++|....+ ..+=|+++|+|+|+-.
T Consensus 258 -~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 258 -ADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred -CCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 9999987653 4566999999999854
No 205
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=45.18 E-value=4e+02 Score=28.69 Aligned_cols=35 Identities=34% Similarity=0.577 Sum_probs=22.4
Q ss_pred cCCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEec
Q 003661 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 402 ~~~kPDIIh~--h~---------~~~~lva~llar~lgip~v~t~H 436 (805)
+..+||+|++ |. ..|...|++-+...|+|-+..-.
T Consensus 88 ~~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 88 LPEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred cCCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 3458999995 11 11235566667788999876554
No 206
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=43.79 E-value=56 Score=35.09 Aligned_cols=70 Identities=13% Similarity=0.122 Sum_probs=46.7
Q ss_pred hHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-cEEEcCcc--ccccccccCceEEEECCCCHHHHHHHH
Q 003661 652 NGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKG--GPAEIIVNGKSGYHIDPYHGEQAAEIL 722 (805)
Q Consensus 652 ~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~Gl-PVVat~~G--G~~EiI~dg~~G~li~p~d~e~lA~aI 722 (805)
..+....|++ +..+++|.-...+..-++|||++|| |||.++.- ...++|.=....+.++..+..++.+.|
T Consensus 227 ~~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 227 PSEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred chHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 3456677775 7788888776668889999999996 66665321 235566445567778766665554444
No 207
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=43.07 E-value=63 Score=36.92 Aligned_cols=83 Identities=11% Similarity=-0.083 Sum_probs=56.0
Q ss_pred HHHcCCcEEEcCcc---ccccccccCceEEEECC-CCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003661 682 AMTCGLPTFATCKG---GPAEIIVNGKSGYHIDP-YHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYS 757 (805)
Q Consensus 682 AMA~GlPVVat~~G---G~~EiI~dg~~G~li~p-~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a 757 (805)
-|+||-.|+..+.. -..+.+...++-+=+.. +|-.++.++|. -+.+|++..++|+++|.+.+.+..+.+.+.
T Consensus 233 lL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~----w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~ 308 (395)
T PF05686_consen 233 LLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVE----WLNAHDDEAQRIAENGQRFAREYLTMEDVY 308 (395)
T ss_pred HHcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhh----hcccChHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 36666666653211 12223344555554554 36778878774 455899999999999999998888888887
Q ss_pred HHHHHHHHHhc
Q 003661 758 QRLLTLTGVYG 768 (805)
Q Consensus 758 ~~ll~Ly~~~~ 768 (805)
.=+..|...|+
T Consensus 309 ~Y~~~LL~eYa 319 (395)
T PF05686_consen 309 CYWRRLLLEYA 319 (395)
T ss_pred HHHHHHHHHHH
Confidence 77777776653
No 208
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=42.68 E-value=4.4e+02 Score=28.13 Aligned_cols=36 Identities=31% Similarity=0.413 Sum_probs=22.9
Q ss_pred cCCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEecC
Q 003661 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 402 ~~~kPDIIh~--h~---------~~~~lva~llar~lgip~v~t~H~ 437 (805)
+..+||+|.+ |. ..|...|++-+...|+|-+..-..
T Consensus 83 ~~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 83 MPEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred ccCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 3567999994 21 112355666677889998866553
No 209
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=42.37 E-value=1.1e+02 Score=32.96 Aligned_cols=85 Identities=9% Similarity=-0.026 Sum_probs=54.7
Q ss_pred HHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003661 680 VEAMTCGLPTFATCKG---GPAEIIVNGKSGYHIDPYHG-EQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKI 755 (805)
Q Consensus 680 lEAMA~GlPVVat~~G---G~~EiI~dg~~G~li~p~d~-e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~ 755 (805)
-=-|+|+-.|+..... -.-+.++..++=+-+.+... +++.++|.-+ ..+|+..++|+++|++.+.+..+.+.
T Consensus 162 ~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~sd~~l~~~i~~~----~~~~~~a~~Ia~~~~~~~~~~L~~~~ 237 (256)
T smart00672 162 KYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWG----NEHDKKAQEIGKRGSEFIQQNLSMED 237 (256)
T ss_pred HHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCCchhhHHHHHHHH----HhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 3345666555554321 12222334444444443222 3377777444 48999999999999999988899998
Q ss_pred HHHHHHHHHHHhc
Q 003661 756 YSQRLLTLTGVYG 768 (805)
Q Consensus 756 ~a~~ll~Ly~~~~ 768 (805)
+..-+..+...|+
T Consensus 238 ~~~Y~~~ll~eya 250 (256)
T smart00672 238 VYDYMFHLLQEYA 250 (256)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877664
No 210
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=41.67 E-value=92 Score=29.72 Aligned_cols=101 Identities=21% Similarity=0.214 Sum_probs=50.5
Q ss_pred HHHHHHHHCCCceeeceeEEecCCCCCC-CCccccceeeecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHH
Q 003661 316 EMLLRIKQQGLDITPQILIITRLLPDAV-GTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDV 394 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~~~~~-g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~ 394 (805)
|...+|.++|..++ .|+++|...++.. |...- ..+-....+..+|+.++.. ... ..--.-.+.|...+
T Consensus 9 Etl~aL~~~g~~i~-ev~lI~T~~~~v~~~~~~l-~~~l~~~~~~~~i~~i~~~-~~D--------I~t~~d~~~~~~~I 77 (124)
T TIGR03642 9 EAIDYLKKKGEPIS-DVILIYTKDPYVLSALRAL-KDSLLKKFYKAEVHKIPLK-FDD--------ILSDEDILTFMSIA 77 (124)
T ss_pred HHHHHHHhcCCCCC-eEEEEEcCCHHHHHHHHHH-HHHhHHhcCCcEEEEeccC-ccc--------cCCHHHHHHHHHHH
Confidence 67778899999865 5667775543321 10000 0000011123455444431 101 11111234555545
Q ss_pred HHHHHHHcCCCce--EEEEcCCCc----hHHHHHHHHHcC
Q 003661 395 AVEIAKELQGKPD--LIIGNYSDG----NIVASLLAHKLG 428 (805)
Q Consensus 395 ~~~i~~~~~~kPD--IIh~h~~~~----~lva~llar~lg 428 (805)
.+.+... ..+++ -+|.+-+.| ++.+.+++..+|
T Consensus 78 ~~~i~~l-~~~~~~~~lh~~iaGGRK~Ms~~~~~a~sl~g 116 (124)
T TIGR03642 78 AKEVKKE-RENYGCERIIVNISGGRKIMTIILALYAQLLF 116 (124)
T ss_pred HHHHHHH-hhCCCcceEEEEecCCHHHHHHHHHHHHHHhC
Confidence 5444443 44666 699888776 566677777766
No 211
>COG1647 Esterase/lipase [General function prediction only]
Probab=41.08 E-value=1.4e+02 Score=31.57 Aligned_cols=34 Identities=21% Similarity=0.159 Sum_probs=25.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003661 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~ 437 (805)
+-..|..+--+.|++++..+|....++-++.+-+
T Consensus 83 gy~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a 116 (243)
T COG1647 83 GYDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCA 116 (243)
T ss_pred CCCeEEEEeecchhHHHHHHHhhCCccceeeecC
Confidence 4556777788889999999999887665555443
No 212
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=38.05 E-value=3.3e+02 Score=28.86 Aligned_cols=105 Identities=15% Similarity=0.109 Sum_probs=59.9
Q ss_pred CCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Q 003661 569 NKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 569 ~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~ 648 (805)
..-+|+|+|+ ..+...++|..++=...+.-.+-+.-|---.. + .....+.. +.+.+++.+.|....
T Consensus 107 r~GiILFv~t---n~~~~~~ve~aA~r~~gy~~~~~w~~G~lTN~----~---~l~g~~~~--~~~~~pd~~~f~~t~-- 172 (251)
T KOG0832|consen 107 RGGIILFVGT---NNGFKDLVERAARRAGGYSHNRKWLGGLLTNA----R---ELFGALVR--KFLSLPDALCFLPTL-- 172 (251)
T ss_pred cCCeEEEEec---CcchHHHHHHHHHHhcCceeeeeeccceeecc----h---hhcccccc--cccCCCcceeecccC--
Confidence 3457899987 55667777766553333332333333321110 0 00001111 223355666666411
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-Ccccccccc
Q 003661 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEII 701 (805)
Q Consensus 649 ~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat-~~GG~~EiI 701 (805)
+.|+.|.-...|... +++||.-++.|+|+- |....++.|
T Consensus 173 -------------~~D~vvvln~~e~~s-AilEA~K~~IPTIgIVDtN~~P~li 212 (251)
T KOG0832|consen 173 -------------TPDLVVVLNPEENHS-AILEAAKMAIPTIGIVDTNCNPELI 212 (251)
T ss_pred -------------CcceeEecCcccccH-HHHHHHHhCCCeEEEecCCCCccce
Confidence 237888887777765 899999999999995 555566666
No 213
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=37.35 E-value=1.3e+02 Score=32.39 Aligned_cols=34 Identities=24% Similarity=0.240 Sum_probs=25.8
Q ss_pred CceEEEEc--CCC--chHHHHHHHHHcCCcEEEEecCC
Q 003661 405 KPDLIIGN--YSD--GNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 405 kPDIIh~h--~~~--~~lva~llar~lgip~v~t~H~l 438 (805)
.||+|.|- ..+ .+.++..+|..+|+|++..+-.+
T Consensus 112 ~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 112 GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 49999962 223 47899999999999988766543
No 214
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=37.24 E-value=1.2e+02 Score=36.03 Aligned_cols=154 Identities=12% Similarity=0.125 Sum_probs=96.3
Q ss_pred CcEEEEEeecc-CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Q 003661 570 KPILFTMARLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 570 k~vIl~vGRL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~ 648 (805)
++..+-.|.-. -.||-+..++++.+..+ ++-.|.+... ....++.-|.=+|
T Consensus 277 ~~~AlVyGK~~~~w~~k~~~l~~l~~~~e----ih~tV~~~~~--------------------~~~~~P~~V~NHG---- 328 (559)
T PF15024_consen 277 KNQALVYGKERYMWKGKEKYLDVLHKYME----IHGTVYDEPQ--------------------RPPNVPSFVKNHG---- 328 (559)
T ss_pred cceeEEEccchhhhcCcHHHHHHHHhhcE----EEEEeccCCC--------------------CCcccchhhhhcC----
Confidence 34445555543 36777888887765432 3333333221 1112344566667
Q ss_pred cCChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCcccccc-----ccc-------------------c
Q 003661 649 RVRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCKGGPAE-----IIV-------------------N 703 (805)
Q Consensus 649 ~v~~~el~~~la~aaDvfV~PS~-~E~fGltvlEAMA~GlPVVat~~GG~~E-----iI~-------------------d 703 (805)
..+..|+..++.. +-+||---. +| |=+.+||+|.|+|.|-.....+.. ... .
T Consensus 329 ~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG 405 (559)
T PF15024_consen 329 ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIG 405 (559)
T ss_pred cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCC
Confidence 6677899999996 779886433 55 457899999999998875543321 110 0
Q ss_pred CceEEEECCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003661 704 GKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVY 767 (805)
Q Consensus 704 g~~G~li~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~~ 767 (805)
.-.-+.++-+|.+++-++|.+++. .+- --++--.||-+.+.+|+..+.+.-
T Consensus 406 ~PhVytVd~~n~~~v~~Avk~il~----~~v---------~Py~P~efT~egmLeRv~~~ie~q 456 (559)
T PF15024_consen 406 EPHVYTVDINNSTEVEAAVKAILA----TPV---------EPYLPYEFTCEGMLERVNALIEKQ 456 (559)
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHh----cCC---------CCcCCcccCHHHHHHHHHHHHHhh
Confidence 113467888899999999987773 221 123335788999999988877653
No 215
>PRK12342 hypothetical protein; Provisional
Probab=35.76 E-value=1.2e+02 Score=32.66 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=26.1
Q ss_pred CceEEEEc--CCC--chHHHHHHHHHcCCcEEEEecCC
Q 003661 405 KPDLIIGN--YSD--GNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 405 kPDIIh~h--~~~--~~lva~llar~lgip~v~t~H~l 438 (805)
.||+|.|- ..+ .+.++..+|..+|+|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 49999962 223 37899999999999998776643
No 216
>PLN00016 RNA-binding protein; Provisional
Probab=32.68 E-value=44 Score=37.57 Aligned_cols=20 Identities=20% Similarity=0.287 Sum_probs=16.5
Q ss_pred HHHHHHHHCCCceeeceeEEecCC
Q 003661 316 EMLLRIKQQGLDITPQILIITRLL 339 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~~ 339 (805)
.|++.|.++||+|+ +++|..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 56677889999999 998864
No 217
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=32.63 E-value=3.7e+02 Score=27.35 Aligned_cols=31 Identities=26% Similarity=0.367 Sum_probs=22.9
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003661 408 LIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 408 IIh~h~~~~~lva~llar~lgip~v~t~H~l 438 (805)
++..-.+.|++.|.+++.+.++|-|.+-=++
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 4444556778999999999999987664443
No 218
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=32.39 E-value=2.8e+02 Score=29.81 Aligned_cols=84 Identities=11% Similarity=-0.038 Sum_probs=43.7
Q ss_pred HHHHHcCCCC-c-EEEecCCCCcCChHHHHHHHHc-cCcEEEeCCCCC--CCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003661 629 SLIDQYKLNG-Q-FRWISSQMNRVRNGELYRYICD-TKGAFVQPALYE--AFGLTVVEAMTCGLPTFATCKGGPAEIIVN 703 (805)
Q Consensus 629 ~li~~l~L~~-~-V~flG~~~~~v~~~el~~~la~-aaDvfV~PS~~E--~fGltvlEAMA~GlPVVat~~GG~~EiI~d 703 (805)
..+.++|+++ + |-..| +.+.+.=..++.+ ..|++|.=-.-+ ++--++--|+.+|+|||.-+.+-...
T Consensus 165 ~~~~~~G~~~~~iia~~g----Pfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~---- 236 (256)
T TIGR00715 165 AQALKLGFPSDRIIAMRG----PFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP---- 236 (256)
T ss_pred HHHHHcCCChhcEEEEeC----CCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC----
Confidence 3566677743 3 33334 2222222333331 255666533222 35557888999999999987764311
Q ss_pred CceEEEECCCCHHHHHHHHHH
Q 003661 704 GKSGYHIDPYHGEQAAEILVD 724 (805)
Q Consensus 704 g~~G~li~p~d~e~lA~aI~~ 724 (805)
+ +-.+ .+.+++.+.+.+
T Consensus 237 ~--~~~~--~~~~el~~~l~~ 253 (256)
T TIGR00715 237 G--VAIF--DDISQLNQFVAR 253 (256)
T ss_pred C--CccC--CCHHHHHHHHHH
Confidence 0 1112 367776666643
No 219
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=32.28 E-value=4e+02 Score=28.23 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=21.2
Q ss_pred CCCceEEEEcC--CCchHHHHHHHHHcCCcEEEEec
Q 003661 403 QGKPDLIIGNY--SDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 403 ~~kPDIIh~h~--~~~~lva~llar~lgip~v~t~H 436 (805)
...+|.|.... ....-+...+-+.+|+|++..-.
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 34688777433 33344555566779999876544
No 220
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=31.59 E-value=2.5e+02 Score=29.41 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=21.6
Q ss_pred CCceEEEEcCCC--chHHHHHHHHH-cCCcEEE-EecC
Q 003661 404 GKPDLIIGNYSD--GNIVASLLAHK-LGVTQCT-IAHA 437 (805)
Q Consensus 404 ~kPDIIh~h~~~--~~lva~llar~-lgip~v~-t~H~ 437 (805)
.+.|++.+-... .|.+++.++++ +|+|.++ .+++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~ 102 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVIARARN 102 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEecC
Confidence 578888864433 36766666655 8988654 4443
No 221
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=30.28 E-value=4.3e+02 Score=27.76 Aligned_cols=117 Identities=16% Similarity=0.200 Sum_probs=66.2
Q ss_pred CcEEEEEeecc-CCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCC
Q 003661 570 KPILFTMARLD-RVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMN 648 (805)
Q Consensus 570 k~vIl~vGRL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~ 648 (805)
..+|+|+|.-- ..+. .|+..++++++..-.+.+|..|.... .-+.+...+...+-. |
T Consensus 108 ~riVvFvGSpi~e~ek--eLv~~akrlkk~~Vaidii~FGE~~~----------~~e~l~~fida~N~~------~---- 165 (259)
T KOG2884|consen 108 QRIVVFVGSPIEESEK--ELVKLAKRLKKNKVAIDIINFGEAEN----------NTEKLFEFIDALNGK------G---- 165 (259)
T ss_pred eEEEEEecCcchhhHH--HHHHHHHHHHhcCeeEEEEEeccccc----------cHHHHHHHHHHhcCC------C----
Confidence 56788888643 2222 67777777777655566666665532 124566666665432 1
Q ss_pred cCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEcCcccccc-cccc-CceEEEECCCCHHHHHHHHHHHH
Q 003661 649 RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAE-IIVN-GKSGYHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 649 ~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat~~GG~~E-iI~d-g~~G~li~p~d~e~lA~aI~~~l 726 (805)
+.+.++..|. ..+++-...-.|++..+.||..- .... +..-|=++|++-.++|.+|+--+
T Consensus 166 ------------~gshlv~Vpp------g~~L~d~l~ssPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM 227 (259)
T KOG2884|consen 166 ------------DGSHLVSVPP------GPLLSDALLSSPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM 227 (259)
T ss_pred ------------CCceEEEeCC------CccHHHHhhcCceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH
Confidence 0344555552 12444445567888876544432 2221 12334567888789999996544
No 222
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=30.21 E-value=93 Score=31.00 Aligned_cols=40 Identities=20% Similarity=0.424 Sum_probs=29.7
Q ss_pred HHHHHHccCcEEEeCCC----CCCCcH--HHHHHHHcCCcEEEcCc
Q 003661 655 LYRYICDTKGAFVQPAL----YEAFGL--TVVEAMTCGLPTFATCK 694 (805)
Q Consensus 655 l~~~la~aaDvfV~PS~----~E~fGl--tvlEAMA~GlPVVat~~ 694 (805)
+.+.+.+.+|++|+.-+ .|+-|+ .+.+|++.|+||+++-.
T Consensus 86 l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~ 131 (159)
T PF10649_consen 86 LRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVP 131 (159)
T ss_pred HHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEEC
Confidence 45556666899998765 455555 48899999999999733
No 223
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=29.57 E-value=7.4e+02 Score=26.73 Aligned_cols=111 Identities=14% Similarity=0.059 Sum_probs=68.6
Q ss_pred EEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCC---CCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCc
Q 003661 573 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK---ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 573 Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~---~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~ 649 (805)
++.++..+...+.+.+++.++++++.+ ++++..|...+. .+.+.--.+..+.+++..+++|++=-.....
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~g--~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~d----- 100 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKELG--VHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVMD----- 100 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHcC--CCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeCC-----
Confidence 344444566778999999999999864 567777743221 1112112355677888899998753333332
Q ss_pred CChHHHHHHHHccCcEEEeCCC-CCCCcHHHHHHHHcCCcEEEcCc
Q 003661 650 VRNGELYRYICDTKGAFVQPAL-YEAFGLTVVEAMTCGLPTFATCK 694 (805)
Q Consensus 650 v~~~el~~~la~aaDvfV~PS~-~E~fGltvlEAMA~GlPVVat~~ 694 (805)
.+-..++.+..|++-.+|. .+.++ -+-++-..|+||+.++.
T Consensus 101 ---~~~~~~l~~~vd~~kIga~~~~n~~-LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 101 ---TRDVEEVADYADMLQIGSRNMQNFE-LLKEVGKTKKPILLKRG 142 (266)
T ss_pred ---hhhHHHHHHhCCEEEECcccccCHH-HHHHHhcCCCcEEEeCC
Confidence 2334444445789999987 33333 33445567999998744
No 224
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=29.45 E-value=31 Score=28.52 Aligned_cols=36 Identities=25% Similarity=0.378 Sum_probs=26.6
Q ss_pred ccccccchHHHH---HHHHHHhHHHHHHHHHHHHhcCCC
Q 003661 5 ALTRVHSLRERL---DETLSAHRNEILALLSRIEGKGKG 40 (805)
Q Consensus 5 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 40 (805)
.+.|+++|...+ +....-...+|.+||.+.+++||=
T Consensus 13 ~l~RIh~mLkmf~~~~~~~~~s~~eL~~fL~~lv~e~~L 51 (60)
T PF08672_consen 13 PLDRIHSMLKMFPKDPGGYDISLEELQEFLDRLVEEGKL 51 (60)
T ss_dssp EHHHHHHHHHHH-GGG--TT--HHHHHHHHHHHHHTTSE
T ss_pred CHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHCCcE
Confidence 578999998888 344466778999999999998873
No 225
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=29.30 E-value=2.1e+02 Score=29.68 Aligned_cols=113 Identities=18% Similarity=0.131 Sum_probs=62.6
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC-cEEEecCCCCcCChHHHHHH
Q 003661 580 DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG-QFRWISSQMNRVRNGELYRY 658 (805)
Q Consensus 580 ~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~-~V~flG~~~~~v~~~el~~~ 658 (805)
+-.|=+..|..|+.-+... ..-++++||..+. ....+++.++..|..- +=+|+|- ...+..+-.+
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~----------~~~~v~k~A~~~g~~~v~~RWlgG---~LTN~~~~~~ 112 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY----------GQKPVQKFAEVVGAKAITGRFIPG---TLTNPSLKGY 112 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH----------HHHHHHHHHHHhCCeeecCccCCC---cCcCcchhcc
Confidence 4445556666676665554 3458899998753 1234455555554321 1268872 2222222222
Q ss_pred HHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCC
Q 003661 659 ICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEIIVNGKSGYHIDPYH 714 (805)
Q Consensus 659 la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat-~~GG~~EiI~dg~~G~li~p~d 714 (805)
+ --|+.+..... .-..++.||.-.|.|||+- |+...++.| -+.++.+|
T Consensus 113 ~--~Pdliiv~dp~-~~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Nd 161 (204)
T PRK04020 113 I--EPDVVVVTDPR-GDAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNN 161 (204)
T ss_pred C--CCCEEEEECCc-ccHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCC
Confidence 1 13444443221 1267899999999999994 666666665 34565443
No 226
>PLN03228 methylthioalkylmalate synthase; Provisional
Probab=28.93 E-value=1e+03 Score=28.20 Aligned_cols=110 Identities=17% Similarity=0.303 Sum_probs=65.6
Q ss_pred ceeeeeccccccCCCCCCCCCCCCchhhhhhHhhhhhhcCCCC-C---cchH----HHHHhhcccCCeeeecccC-CCCH
Q 003661 131 FVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKE-S---MHPL----LEFLRVHCHKGKNMMLNDR-IQNL 201 (805)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~----~~~~~~~~~~~~~~~~~~~-~~~~ 201 (805)
.+.--.+=||-.++|.++..+.-|+ +=|-+--+|.++++.+ + ..|+ -+|+-.--.+-+.+.|.|. +.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~I~DtTLRDG 95 (503)
T PLN03228 18 TVVGRSVLPIGSSLPSLRLTRPYGK--PTLFRSCCSSESKKVATSATDLKPIVERWPEYIPNKLPDKNYVRVLDTTLRDG 95 (503)
T ss_pred ceEEEeeeecccCCCcccccCCCCC--ccHHHHHHHHhhhccccccccccchhhcccccCCcccCCCCCeEEEeCCCCCC
Confidence 3444467799999999999988776 4566777888887763 2 4333 3444433333444444443 4444
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCc-----hHHHHHhhhcCc---ccCcCCcHHHHHHHHHHHHHh
Q 003661 202 NSLQHVLRKAEEYLTTVVPETPF-----SELALRFQEIGL---ERGWGDTAERALEMIQLLLDL 257 (805)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~gw~~~~~r~~~~~~~l~~~ 257 (805)
.| .+..+| -++...|.++|+ |-||-..-....+.++.+...
T Consensus 96 eQ---------------~~gv~fs~eeKi~Ia~~L~~~GVd~IEvG~Pa~s~~e~e~i~~i~~~ 144 (503)
T PLN03228 96 EQ---------------SPGGSLTPPQKLEIARQLAKLRVDIMEVGFPGSSEEEFEAVKTIAKT 144 (503)
T ss_pred CC---------------CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh
Confidence 32 122222 245667888887 778866655556666555443
No 227
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=28.23 E-value=44 Score=31.30 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=20.0
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecC
Q 003661 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (805)
Q Consensus 299 tGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~ 338 (805)
|+|-..-.+ .|+++|+++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 355555555 68888999999999 88754
No 228
>TIGR01568 A_thal_3678 uncharacterized plant-specific domain TIGR01568. This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.
Probab=28.11 E-value=98 Score=26.22 Aligned_cols=51 Identities=18% Similarity=0.335 Sum_probs=36.0
Q ss_pred CCCCchHHHHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCCCcc--cHhHHhc
Q 003661 220 PETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPC--TLETFLG 271 (805)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p~~~--~~~~f~~ 271 (805)
...||.+|+.-+++|=-|.|-+.+-+.+.|-+.-+.. |++|+.+ .+.+|..
T Consensus 7 S~DPy~DFr~SM~EMI~~~~i~~~w~~LeeLL~cYL~-LN~~~~H~~Iv~AF~d 59 (66)
T TIGR01568 7 SDDPYEDFRRSMEEMIEERELEADWKELEELLACYLD-LNPKKSHRFIVRAFVD 59 (66)
T ss_pred CCChHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-hCCchhhhHHHHHHHH
Confidence 5679999999999998888866554566665555554 5666644 5666653
No 229
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=27.87 E-value=6.3e+02 Score=25.35 Aligned_cols=109 Identities=9% Similarity=0.124 Sum_probs=64.3
Q ss_pred eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHc-cCcEEEeCCCCCC----Cc
Q 003661 602 VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICD-TKGAFVQPALYEA----FG 676 (805)
Q Consensus 602 v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~-aaDvfV~PS~~E~----fG 676 (805)
.+++++.+.+. ....+....+..+ .+...+. ..+..+....+.. ..|++++-....+ .|
T Consensus 4 ~~Ilivdd~~~----------~~~~l~~~L~~~~---~~~~v~~---~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g 67 (216)
T PRK10840 4 MNVIIADDHPI----------VLFGIRKSLEQIE---WVNVVGE---FEDSTALINNLPKLDAHVLITDLSMPGDKYGDG 67 (216)
T ss_pred eEEEEECCcHH----------HHHHHHHHHhcCC---CCEEEEE---ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCCH
Confidence 56777776642 2334445554432 2222221 1123455555542 3688887544332 57
Q ss_pred HHHHHHHH---cCCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 003661 677 LTVVEAMT---CGLPTFA-TCKGGP---AEIIVNGKSGYHIDPYHGEQAAEILVDFF 726 (805)
Q Consensus 677 ltvlEAMA---~GlPVVa-t~~GG~---~EiI~dg~~G~li~p~d~e~lA~aI~~~l 726 (805)
+.+++.+. .++|+|+ |..... .+.++.|..||+..|.+++++.++|....
T Consensus 68 ~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 68 ITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred HHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 77777664 3567776 333322 34467789999999999999999997665
No 230
>PLN02764 glycosyltransferase family protein
Probab=27.85 E-value=6e+02 Score=29.72 Aligned_cols=25 Identities=24% Similarity=0.440 Sum_probs=18.0
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003661 405 KPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (805)
Q Consensus 405 kPDIIh~h~~~~~lva~llar~lgip~v 432 (805)
+||.|++.. . ..+.-+|+++|||.+
T Consensus 108 ~~~~iV~D~--~-~w~~~vA~~~gIP~~ 132 (453)
T PLN02764 108 EPDLIFFDF--A-HWIPEVARDFGLKTV 132 (453)
T ss_pred CCCEEEECC--c-hhHHHHHHHhCCCEE
Confidence 578888763 3 355667888999955
No 231
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=27.71 E-value=5.1e+02 Score=29.19 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=23.7
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003661 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~llar~lgip~v~t~H 436 (805)
+-.-+..+-.+.|+..|++.+.....|+....+
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ 205 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPC 205 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEe
Confidence 444677777788888888888877777665444
No 232
>COG4195 Phage-related replication protein [General function prediction only]
Probab=27.48 E-value=71 Score=32.48 Aligned_cols=60 Identities=27% Similarity=0.237 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHHhhcCCCcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHH
Q 003661 243 TAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLL 319 (805)
Q Consensus 243 ~~~r~~~~~~~l~~~~~~p~~~~~~~f~~~~~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~ 319 (805)
.+++.-....-|.+....-|+..+..= ..--+|+|++||| ||++-=+.|+||+++++-+-
T Consensus 7 ~~~d~y~~f~~Lse~esp~dy~ii~~e----~~~S~v~ilapHG-------------G~IE~GvSELare~s~e~S~ 66 (208)
T COG4195 7 SAEDEYSNFASLSENESPVDYGIIYTE----KLGSRVLILAPHG-------------GGIEGGVSELAREFSDEYSG 66 (208)
T ss_pred CccccccCHHHHHhccCcccCCeEEee----ccCceEEEEeccC-------------CccCccHHHHHHHHHHHHHH
Confidence 344444444555555543333333211 1124799999998 78888888889888766443
No 233
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.42 E-value=1e+03 Score=27.52 Aligned_cols=175 Identities=11% Similarity=0.076 Sum_probs=103.7
Q ss_pred EEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEec-CCCCcCC
Q 003661 573 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWIS-SQMNRVR 651 (805)
Q Consensus 573 Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG-~~~~~v~ 651 (805)
|=|.|..+..+=+....+...+.++ +++.++||-..-. ...|....++|.+..+..+ +++|.|.= ... -..
T Consensus 157 iP~ygsyte~dpv~ia~egv~~fKk--e~fdvIIvDTSGR----h~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasi-GQa 228 (483)
T KOG0780|consen 157 VPFYGSYTEADPVKIASEGVDRFKK--ENFDVIIVDTSGR----HKQEASLFEEMKQVSKAIK-PDEIIFVMDASI-GQA 228 (483)
T ss_pred CeeEecccccchHHHHHHHHHHHHh--cCCcEEEEeCCCc----hhhhHHHHHHHHHHHhhcC-CCeEEEEEeccc-cHh
Confidence 3356677778888888899998887 4677888865322 2345567788888888877 67777763 111 122
Q ss_pred hHHHHHHHHccCcE--EEeCCC----CCCCcHHHHHHHHcCCcEEEcCccccccccccCc----eEEEECCCCHHHHHHH
Q 003661 652 NGELYRYICDTKGA--FVQPAL----YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGK----SGYHIDPYHGEQAAEI 721 (805)
Q Consensus 652 ~~el~~~la~aaDv--fV~PS~----~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~----~G~li~p~d~e~lA~a 721 (805)
..+..+.+..+.|+ .+++-. .-|-.++.++ +.++||+---+|..-|-.+.-. .+-+.--+|.+.+.++
T Consensus 229 ae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGDi~glvek 306 (483)
T KOG0780|consen 229 AEAQARAFKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGDIEGLVEK 306 (483)
T ss_pred HHHHHHHHHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHHHHHHhccccHHHHHHH
Confidence 33444445544443 333332 2223344444 5789999776664433332110 1112334677788888
Q ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003661 722 LVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGV 766 (805)
Q Consensus 722 I~~~l~~l~~dp~~~~~ms~~ar~~v~~~ysw~~~a~~ll~Ly~~ 766 (805)
+.++. ...++++.+++.+ -+||...+.+++-.+.+.
T Consensus 307 ~~ev~--~~d~~el~~kl~~-------gkFtlrd~y~Qfq~imkm 342 (483)
T KOG0780|consen 307 VQEVG--KDDAKELVEKLKQ-------GKFTLRDFYDQFQNIMKM 342 (483)
T ss_pred HHHHh--hhhHHHHHHHHHh-------CCccHHHHHHHHHHHHhh
Confidence 76654 1233444443322 489999999999888765
No 234
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=27.26 E-value=61 Score=36.84 Aligned_cols=52 Identities=15% Similarity=0.352 Sum_probs=37.3
Q ss_pred cCCCcccHhHHhccCCCcceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecC
Q 003661 259 EAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (805)
Q Consensus 259 ~~p~~~~~~~f~~~~~~~~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~ 338 (805)
.+|.+..-..|-+..+..++|+|+...|+.| . .+++.|.++|++|. +++|.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~IG--------------~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGYIG--------------K-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcHHH--------------H-----------HHHHHHHHCCCEEE----EEEec
Confidence 4566667777877777788998886555432 2 45667888999998 88875
Q ss_pred C
Q 003661 339 L 339 (805)
Q Consensus 339 ~ 339 (805)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 4
No 235
>PLN02534 UDP-glycosyltransferase
Probab=27.22 E-value=7e+02 Score=29.45 Aligned_cols=27 Identities=15% Similarity=0.436 Sum_probs=20.5
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCC
Q 003661 301 GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (805)
Q Consensus 301 G~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~ 339 (805)
|-..-.+ +|++.|+.+|+.|| +++...
T Consensus 20 GHi~P~l--------~LAk~La~~G~~vT----~v~t~~ 46 (491)
T PLN02534 20 GHMIPMI--------DMARLLAERGVIVS----LVTTPQ 46 (491)
T ss_pred chHHHHH--------HHHHHHHhCCCeEE----EEECCC
Confidence 5555566 67888899999999 877653
No 236
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=26.79 E-value=1.4e+02 Score=30.70 Aligned_cols=49 Identities=29% Similarity=0.398 Sum_probs=37.1
Q ss_pred chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003661 383 VWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQC 432 (805)
Q Consensus 383 i~~~l~~f~~~~~~~i~~~~~~kPDIIh~h~~~~~lva~llar~lgip~v 432 (805)
.|..+........+++.+. +.+||+|++-.-.|-..|.+++..+|++-+
T Consensus 8 Sw~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~~l 56 (192)
T COG2236 8 SWEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVKPL 56 (192)
T ss_pred cHHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCCce
Confidence 3555666666666666644 578999999988888899999999998533
No 237
>PRK06988 putative formyltransferase; Provisional
Probab=26.12 E-value=3.6e+02 Score=29.77 Aligned_cols=13 Identities=23% Similarity=0.470 Sum_probs=9.0
Q ss_pred HHHHHHHCCCcee
Q 003661 317 MLLRIKQQGLDIT 329 (805)
Q Consensus 317 La~~L~~~Gh~V~ 329 (805)
..+.|.+.|++|.
T Consensus 17 ~L~~L~~~~~~i~ 29 (312)
T PRK06988 17 CLQVLLARGVDVA 29 (312)
T ss_pred HHHHHHhCCCCEE
Confidence 3455677899876
No 238
>PRK04531 acetylglutamate kinase; Provisional
Probab=25.94 E-value=1.6e+02 Score=33.70 Aligned_cols=74 Identities=14% Similarity=0.111 Sum_probs=42.9
Q ss_pred CCCCcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEE-eCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecC
Q 003661 567 DRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVV-GGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISS 645 (805)
Q Consensus 567 ~~~k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~ 645 (805)
.+.+..++-+|.=.-..+++.+++.++.+... +.++|+| |+|+ .+.++.++.|+..+.. -|.
T Consensus 34 ~~~~~~VIKiGG~~l~~~~~~l~~dla~L~~~--G~~~VlVHGggp--------------qI~~~l~~~gie~~~v-~G~ 96 (398)
T PRK04531 34 DAERFAVIKVGGAVLRDDLEALASSLSFLQEV--GLTPIVVHGAGP--------------QLDAELDAAGIEKETV-NGL 96 (398)
T ss_pred CCCcEEEEEEChHHhhcCHHHHHHHHHHHHHC--CCcEEEEECCCH--------------HHHHHHHHcCCCcEEE-CCE
Confidence 34577777777522224578888888887765 3555555 5553 4567778888865322 221
Q ss_pred CCCcCChHHHHHHHH
Q 003661 646 QMNRVRNGELYRYIC 660 (805)
Q Consensus 646 ~~~~v~~~el~~~la 660 (805)
++..++..+...
T Consensus 97 ---RVTd~~tl~vv~ 108 (398)
T PRK04531 97 ---RVTSPEALAIVR 108 (398)
T ss_pred ---ecCCHHHHHHHH
Confidence 344455555444
No 239
>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.
Probab=25.42 E-value=1.1e+02 Score=25.40 Aligned_cols=48 Identities=21% Similarity=0.388 Sum_probs=35.2
Q ss_pred CCCchHHHHHhhhcCcccCcCCcHHHHHHHHHHHHHhhcCCCcc--cHhHHh
Q 003661 221 ETPFSELALRFQEIGLERGWGDTAERALEMIQLLLDLLEAPDPC--TLETFL 270 (805)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~gw~~~~~r~~~~~~~l~~~~~~p~~~--~~~~f~ 270 (805)
..||.+|+.-+++|=-|+|-. +.+.+.|-+.-+.. |++|+.+ .+++|.
T Consensus 2 ~DP~~DFr~SM~EMI~~~~i~-~~~~LeeLL~cYL~-LN~~~~H~~Iv~aF~ 51 (59)
T PF04844_consen 2 SDPYEDFRESMVEMIEENGIR-DWDDLEELLACYLS-LNSPEHHKFIVEAFV 51 (59)
T ss_pred CCHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHH-hCChhhhhHHHHHHH
Confidence 469999999999999999988 55566666665554 6676644 466665
No 240
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=24.87 E-value=3.9e+02 Score=28.70 Aligned_cols=34 Identities=32% Similarity=0.590 Sum_probs=22.8
Q ss_pred CceEEEE--cC----C-----CchHHHHHHHHHcCCcEEEEecCC
Q 003661 405 KPDLIIG--NY----S-----DGNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 405 kPDIIh~--h~----~-----~~~lva~llar~lgip~v~t~H~l 438 (805)
+||+|.+ |. . .|...|++=+..+|+|-|..-+..
T Consensus 83 ~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~~ 127 (252)
T COG0496 83 RPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLAY 127 (252)
T ss_pred CCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeehh
Confidence 4999994 21 1 134566666778999988776653
No 241
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=24.06 E-value=4.7e+02 Score=27.31 Aligned_cols=124 Identities=15% Similarity=0.104 Sum_probs=62.7
Q ss_pred CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcC-CCCcE-EEe-cCCCCcCChHHHHHH
Q 003661 582 VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYK-LNGQF-RWI-SSQMNRVRNGELYRY 658 (805)
Q Consensus 582 ~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~-L~~~V-~fl-G~~~~~v~~~el~~~ 658 (805)
.+|++....-.+... ....+.|+|.|.+.. .+ .+-.++.+.+.+.| +- | .|. +....+.....--++
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld~~--yp---~~n~~l~~~i~~~ggll--iSe~p~~~~~~~~~f~~RNri 151 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLDQI--YP---RQNSKLAAKIAENGGLL--LSEYPPDTKPIKYNFPKRNRI 151 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCccC--Cc---hhhHHHHHHHHHcCCEE--EEecCCCCCCCcccHHHHHHH
Confidence 679988777655432 245677778776510 00 12233444343333 10 0 010 111111111223344
Q ss_pred HHccCcEEEeCCCCCCCc--HHHHHHHHcCCcEEEcC-------ccccccccccCceEEEECCCCHHHHH
Q 003661 659 ICDTKGAFVQPALYEAFG--LTVVEAMTCGLPTFATC-------KGGPAEIIVNGKSGYHIDPYHGEQAA 719 (805)
Q Consensus 659 la~aaDvfV~PS~~E~fG--ltvlEAMA~GlPVVat~-------~GG~~EiI~dg~~G~li~p~d~e~lA 719 (805)
++..++..|...-.+..| .++-.|+..|+||++-. ..|+..+|++| ...+. +.+++.
T Consensus 152 ia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~G-A~~i~---~~~d~~ 217 (220)
T TIGR00732 152 ISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQG-AALIT---SAKDIL 217 (220)
T ss_pred HHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCC-CEEEC---CHHHHH
Confidence 444445555444334344 56788999999999962 24677888887 33333 455543
No 242
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=23.77 E-value=4.2e+02 Score=27.22 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=28.2
Q ss_pred HHHHccCc-EEEeCCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003661 657 RYICDTKG-AFVQPALYEAFGLTVVEAMTCGLPTFATCKG 695 (805)
Q Consensus 657 ~~la~aaD-vfV~PS~~E~fGltvlEAMA~GlPVVat~~G 695 (805)
.+++...| +++.|...+...-.+-++...|.|||..+.+
T Consensus 50 ~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 50 QAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 33444455 5556666677777788899999999998777
No 243
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=23.14 E-value=6.2e+02 Score=26.99 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=17.2
Q ss_pred CCcHHHHHHHHcCCcEEEcCccc
Q 003661 674 AFGLTVVEAMTCGLPTFATCKGG 696 (805)
Q Consensus 674 ~fGltvlEAMA~GlPVVat~~GG 696 (805)
|+.-++--|+.+|+|||.-+.+-
T Consensus 203 g~~eKi~AA~~lgi~vivI~RP~ 225 (248)
T PRK08057 203 GTEAKLEAARELGIPVVMIARPA 225 (248)
T ss_pred hhHHHHHHHHHcCCeEEEEeCCC
Confidence 45556777889999999876663
No 244
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=23.01 E-value=1.1e+02 Score=29.26 Aligned_cols=38 Identities=13% Similarity=0.450 Sum_probs=24.3
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEe
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIIT 336 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT 336 (805)
|||++|+ |.|...|....+. +.+++.+.+.|++++ ++-
T Consensus 1 Mkilii~-----------gS~r~~~~t~~l~-------~~~~~~l~~~g~e~~----~i~ 38 (152)
T PF03358_consen 1 MKILIIN-----------GSPRKNSNTRKLA-------EAVAEQLEEAGAEVE----VID 38 (152)
T ss_dssp -EEEEEE-----------SSSSTTSHHHHHH-------HHHHHHHHHTTEEEE----EEE
T ss_pred CEEEEEE-----------CcCCCCCHHHHHH-------HHHHHHHHHcCCEEE----EEe
Confidence 7899985 3344445443333 466777888899998 664
No 245
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=23.01 E-value=9.6e+02 Score=25.77 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=22.3
Q ss_pred cCCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEec
Q 003661 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 402 ~~~kPDIIh~--h~---------~~~~lva~llar~lgip~v~t~H 436 (805)
+..+||+|.+ |. ..|...|++-+...|+|-+..-.
T Consensus 83 ~~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 83 MDKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred ccCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 3458999994 11 11234566667778999876554
No 246
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=23.00 E-value=9.8e+02 Score=26.71 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=38.7
Q ss_pred ccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCC-CcEEEec
Q 003661 579 LDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLN-GQFRWIS 644 (805)
Q Consensus 579 L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~-~~V~flG 644 (805)
+.-..+...++++..+..+.++++.++++|+. +++++.+.++++. +++.++-
T Consensus 9 mGgD~~p~~vl~aa~~a~~~~~~~~~iLvG~~--------------~~I~~~l~~~~~~~~~~~Iv~ 61 (334)
T PRK05331 9 MGGDFGPEVVVPGALQALKEHPDLEIILVGDE--------------EKIKPLLAKKPDLKERIEIVH 61 (334)
T ss_pred CCCccCHHHHHHHHHHHHhcCCCeEEEEEeCH--------------HHHHHHHHhcCCCcCCcEEEe
Confidence 44578899999999888887778999999976 4556666666543 4567664
No 247
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=22.87 E-value=6.4e+02 Score=29.50 Aligned_cols=96 Identities=7% Similarity=0.041 Sum_probs=56.7
Q ss_pred HHHHHHHHccCcEEEeCCCCCCCcHHHHHHHHcCC-cEEEcCc--cccccccccCceEEEECCCCHHHHHHHHHHHHHHh
Q 003661 653 GELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCK--GGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKC 729 (805)
Q Consensus 653 ~el~~~la~aaDvfV~PS~~E~fGltvlEAMA~Gl-PVVat~~--GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l 729 (805)
....+.+++ +-.+++|+-.+...-.++||+.+|| |||-++. ....+++.-..-++.++ .+++-+.|.+.+..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHh-
Confidence 355667775 8788999999988889999999996 7777754 22344443334455554 33333333443321
Q ss_pred hCCHHHHHHHHHHHHHHHHHhCCHH
Q 003661 730 KADPSYWDKISLGGLKRIEEKYTWK 754 (805)
Q Consensus 730 ~~dp~~~~~ms~~ar~~v~~~ysw~ 754 (805)
...+...+|.++-...+...|.|.
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~ 433 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKK 433 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeC
Confidence 223333455555544444555554
No 248
>CHL00194 ycf39 Ycf39; Provisional
Probab=22.86 E-value=73 Score=34.74 Aligned_cols=34 Identities=12% Similarity=0.417 Sum_probs=25.3
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLL 339 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~ 339 (805)
|||+|+...|+.|. .++++|.++||+|. +++|..
T Consensus 1 MkIlVtGatG~iG~-------------------------~lv~~Ll~~g~~V~----~l~R~~ 34 (317)
T CHL00194 1 MSLLVIGATGTLGR-------------------------QIVRQALDEGYQVR----CLVRNL 34 (317)
T ss_pred CEEEEECCCcHHHH-------------------------HHHHHHHHCCCeEE----EEEcCh
Confidence 58888877776431 56677889999998 888763
No 249
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.63 E-value=4.4e+02 Score=28.10 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=56.5
Q ss_pred HHHHHccCcEEEeCC-CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhhCCHH
Q 003661 656 YRYICDTKGAFVQPA-LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPS 734 (805)
Q Consensus 656 ~~~la~aaDvfV~PS-~~E~fGltvlEAMA~GlPVVat~~GG~~EiI~dg~~G~li~p~d~e~lA~aI~~~l~~l~~dp~ 734 (805)
..-+.+ +|++|.-- -+|+|=-.+++.+ .+.++++...++..+- .....-+..+|.+...+++.|.+.+. ..||+
T Consensus 47 ~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~-~~~dPH~Wldp~n~~~~a~~I~~~L~--~~dP~ 121 (264)
T cd01020 47 AAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDK-EGDNPHLWYDPETMSKVANALADALV--KADPD 121 (264)
T ss_pred HHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCC-CCCCCceecCHhHHHHHHHHHHHHHH--HhCcc
Confidence 344554 77777754 2566555566655 4556665544332110 01234567889999999999998874 36888
Q ss_pred HHHHHHHHHHHHHHH
Q 003661 735 YWDKISLGGLKRIEE 749 (805)
Q Consensus 735 ~~~~ms~~ar~~v~~ 749 (805)
......+++.+...+
T Consensus 122 ~~~~y~~N~~~~~~~ 136 (264)
T cd01020 122 NKKYYQANAKKFVAS 136 (264)
T ss_pred cHHHHHHHHHHHHHH
Confidence 888888888877643
No 250
>PLN02293 adenine phosphoribosyltransferase
Probab=22.51 E-value=2.2e+02 Score=28.96 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=25.6
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003661 404 GKPDLIIGNYSDGNIVASLLAHKLGVTQCT 433 (805)
Q Consensus 404 ~kPDIIh~h~~~~~lva~llar~lgip~v~ 433 (805)
.++|+|.+-...+-..|..+|..+|+|+++
T Consensus 61 ~~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~ 90 (187)
T PLN02293 61 MGISVVAGIEARGFIFGPPIALAIGAKFVP 90 (187)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHCCCEEE
Confidence 368999998887878889999999999764
No 251
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=22.36 E-value=9.8e+02 Score=25.66 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=22.4
Q ss_pred cCCCceEEEE--cC---------CCchHHHHHHHHHcCCcEEEEec
Q 003661 402 LQGKPDLIIG--NY---------SDGNIVASLLAHKLGVTQCTIAH 436 (805)
Q Consensus 402 ~~~kPDIIh~--h~---------~~~~lva~llar~lgip~v~t~H 436 (805)
+..+||+|.+ |. ..|...|++-+...|+|-+..-.
T Consensus 84 ~~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 84 VPDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred cCCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 3568999995 11 11235566667788999876544
No 252
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=21.88 E-value=3.1e+02 Score=31.75 Aligned_cols=20 Identities=25% Similarity=0.187 Sum_probs=15.8
Q ss_pred HHHHHHHHHcCCcEEEEecC
Q 003661 418 IVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 418 lva~llar~lgip~v~t~H~ 437 (805)
-..+-+|+.+++|+|..+-+
T Consensus 101 gSTA~lAk~l~~PVvLVid~ 120 (451)
T COG1797 101 GSTADLAKLLGAPVVLVVDA 120 (451)
T ss_pred CCHHHHHHHhCCCEEEEEeC
Confidence 45567889999999987765
No 253
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.69 E-value=81 Score=29.40 Aligned_cols=33 Identities=36% Similarity=0.698 Sum_probs=26.7
Q ss_pred HhhhcCcccCc----CCcHHHHHHHHHHHHHhhcCCC
Q 003661 230 RFQEIGLERGW----GDTAERALEMIQLLLDLLEAPD 262 (805)
Q Consensus 230 ~~~~~~~~~gw----~~~~~r~~~~~~~l~~~~~~p~ 262 (805)
+||+|||.--| |.+|+-+-|++..+++-+.+|+
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~N 61 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAPN 61 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHccC
Confidence 69999999999 7789999999987766555543
No 254
>PRK11519 tyrosine kinase; Provisional
Probab=21.63 E-value=1.5e+03 Score=28.10 Aligned_cols=45 Identities=16% Similarity=0.100 Sum_probs=29.5
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEecC
Q 003661 393 DVAVEIAKELQGKPDLIIGNYSDGN--IVASLLAHKLGVTQCTIAHA 437 (805)
Q Consensus 393 ~~~~~i~~~~~~kPDIIh~h~~~~~--lva~llar~lgip~v~t~H~ 437 (805)
.....++..++.++|+|+...++.. .-+..+++..+..+.+.-++
T Consensus 623 ~~~~~ll~~l~~~yD~ViiDtpP~~~v~Da~~l~~~~d~~l~Vvr~~ 669 (719)
T PRK11519 623 ERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYA 669 (719)
T ss_pred HHHHHHHHHHHhcCCEEEEeCCCcccchHHHHHHHHCCeEEEEEeCC
Confidence 3445556666668999998877642 34556777777776665554
No 255
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=21.59 E-value=7.9e+02 Score=27.45 Aligned_cols=34 Identities=15% Similarity=0.206 Sum_probs=20.8
Q ss_pred EEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeC
Q 003661 573 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGG 609 (805)
Q Consensus 573 Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~ 609 (805)
++.+|. ...||.+...+|++.+++..++ |-+.|.
T Consensus 179 lLn~Gs-e~~kg~~~~~eA~~Ll~~~~~~--l~f~G~ 212 (334)
T PRK05331 179 LLNIGE-EEIKGNELVKEAYELLKAADSS--INFIGN 212 (334)
T ss_pred EEeCCC-CCCCCCHHHHHHHHHHHccCCC--ceEEee
Confidence 444443 2468888888888877654333 445553
No 256
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=21.55 E-value=3.8e+02 Score=27.66 Aligned_cols=104 Identities=15% Similarity=0.083 Sum_probs=58.6
Q ss_pred cCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCC-cEEEecC-CCCcCChHHHHH
Q 003661 580 DRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNG-QFRWISS-QMNRVRNGELYR 657 (805)
Q Consensus 580 ~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~-~V~flG~-~~~~v~~~el~~ 657 (805)
+-.|=...|..|+.-+.+.. .-++++||..+. ....+++.++..|-.. +=+|+|- -+|+.. .
T Consensus 41 dL~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~----------~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~~-----~ 104 (196)
T TIGR01012 41 DLRKTDERLRVAAKFLVRIE-PEDILVVSARIY----------GQKPVLKFAKVTGARAIAGRFTPGTFTNPMQ-----K 104 (196)
T ss_pred cHHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH----------HHHHHHHHHHHhCCceECCeeCCCCCCCccc-----c
Confidence 34455566666665555443 568999998853 1233444555444321 2278872 233221 1
Q ss_pred HHHccCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc-Ccccccccc
Q 003661 658 YICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT-CKGGPAEII 701 (805)
Q Consensus 658 ~la~aaDvfV~PS~~E~fGltvlEAMA~GlPVVat-~~GG~~EiI 701 (805)
.+. --|+.+.... -.-..++.||...|.|||+- |+-..++.|
T Consensus 105 ~~~-~Pdlliv~dp-~~~~~Av~EA~~l~IP~Iai~DTn~dp~~v 147 (196)
T TIGR01012 105 AFR-EPEVVVVTDP-RADHQALKEASEVGIPIVALCDTDNPLRYV 147 (196)
T ss_pred ccC-CCCEEEEECC-ccccHHHHHHHHcCCCEEEEeeCCCCCccC
Confidence 112 1445554322 22356899999999999994 666666666
No 257
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=21.51 E-value=1.1e+03 Score=27.91 Aligned_cols=98 Identities=7% Similarity=-0.002 Sum_probs=52.7
Q ss_pred CCCCHHHHHHHHHHhH-c-------cCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcE------------
Q 003661 581 RVKNLTGLVEWYGKNA-K-------LRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQF------------ 640 (805)
Q Consensus 581 ~~Kgl~~LieA~~~l~-~-------~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V------------ 640 (805)
...|.+..++++-+.. + ..+.-.+-|+|+.... ....++++++.+.+|++-++
T Consensus 192 ~~~Gyd~a~~ail~~l~~~~~~~~~~~~~~~VNii~g~~~~-------~gd~~eikrlL~~~Gi~~~~l~d~s~~~d~p~ 264 (515)
T TIGR01286 192 HITGYDNMFKGILEYFTKGSMDDKVVGSNGKINIIPGFETY-------IGNFREIKRILSLMGVGYTLLSDPEEVLDTPA 264 (515)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccCCCCCeEEEECCCCCC-------chhHHHHHHHHHHcCCCeEEccCccccccCCC
Confidence 3566666666555321 1 1122334456643210 13467888999999996544
Q ss_pred -----EEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHHH--cCCcEEEcC
Q 003661 641 -----RWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMT--CGLPTFATC 693 (805)
Q Consensus 641 -----~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAMA--~GlPVVat~ 693 (805)
.+.| -.+.+++...-...+-+.++|. .+....|.|. +|.|.+...
T Consensus 265 ~g~~~~~~g----gttleei~~a~~A~~~ivl~~~----~~~~~a~~l~~~~g~p~~~~~ 316 (515)
T TIGR01286 265 DGEFRMYAG----GTTLEEMKDAPNAEATVLLQPY----TLRKTKEYIEKTWKQETPKLN 316 (515)
T ss_pred CCCccccCC----CCCHHHHHHhhhCcEEEEEchh----hhHHHHHHHHHHhCCCcccCC
Confidence 2222 3456777775553233433332 2445666665 799876643
No 258
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=21.49 E-value=1.1e+03 Score=27.57 Aligned_cols=108 Identities=14% Similarity=0.168 Sum_probs=72.0
Q ss_pred eEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHcc-CcEEEeCCC-CCCCcHHH
Q 003661 602 VNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDT-KGAFVQPAL-YEAFGLTV 679 (805)
Q Consensus 602 v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~a-aDvfV~PS~-~E~fGltv 679 (805)
.++++|-|..+ ...-+.+.....|. .|+... +..+....+... .|+++.=-+ -+.-|+.+
T Consensus 5 ~~iLvVDDd~~----------ir~~l~~~L~~~G~--~v~~a~------~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~l 66 (464)
T COG2204 5 ARILVVDDDPD----------IRELLEQALELAGY--EVVTAE------SAEEALEALSESPFDLVLLDIRMPGMDGLEL 66 (464)
T ss_pred CCEEEEeCCHH----------HHHHHHHHHHHcCC--eEEEeC------CHHHHHHHHhcCCCCEEEEecCCCCCchHHH
Confidence 35677776642 33445555555553 344443 346777777754 356655333 46678998
Q ss_pred HHHHHc---CCcEEE-cCcccc---ccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003661 680 VEAMTC---GLPTFA-TCKGGP---AEIIVNGKSGYHIDPYHGEQAAEILVDFFE 727 (805)
Q Consensus 680 lEAMA~---GlPVVa-t~~GG~---~EiI~dg~~G~li~p~d~e~lA~aI~~~l~ 727 (805)
++.+.. ++|||. |.+|.+ .+-++.|-.-|+..|-+++.+...+.+.++
T Consensus 67 l~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~ 121 (464)
T COG2204 67 LKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALE 121 (464)
T ss_pred HHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHH
Confidence 887765 799997 677765 444556777889999999999999987774
No 259
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=21.47 E-value=8.2e+02 Score=24.39 Aligned_cols=107 Identities=16% Similarity=0.230 Sum_probs=54.1
Q ss_pred HHHHHHHHCCCceeeceeEEecC-CCCCCCCccccceeeecCccCeEEEEeccCcCCcccccccccccchhhHHHHHHHH
Q 003661 316 EMLLRIKQQGLDITPQILIITRL-LPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDV 394 (805)
Q Consensus 316 eLa~~L~~~Gh~V~~~I~VvT~~-~~~~~g~~~~~~~e~i~~~~~v~Ilrvp~~~~~~~l~~~isr~~i~~~l~~f~~~~ 394 (805)
+.+.+|..+|+.|. =+... .+...+..|.-.++.+....-+.|.. ..++. ...=.+-|- -...+
T Consensus 18 ~~a~~L~~~G~rv~----G~vQ~~~~~~~~~~~~m~l~dl~~G~~~~IsQ-~LG~g-------s~gCrLD~~---~La~A 82 (159)
T PF10649_consen 18 AFAARLRARGVRVA----GLVQRNTADGDGGRCDMDLRDLPSGRRIRISQ-DLGPG-------SRGCRLDPG---ALAEA 82 (159)
T ss_pred HHHHHHHhCCCeEE----EEeccccCCCCCCccceEEEECCCCCEEEEee-ccCCC-------CcccccCHH---HHHHH
Confidence 67788899999987 33322 23333444554555554322222221 11110 000111111 11233
Q ss_pred HHHHHHHcCCCceEEEEcCCC-----c-hHHHHHH-HHHcCCcEEEEecC
Q 003661 395 AVEIAKELQGKPDLIIGNYSD-----G-NIVASLL-AHKLGVTQCTIAHA 437 (805)
Q Consensus 395 ~~~i~~~~~~kPDIIh~h~~~-----~-~lva~ll-ar~lgip~v~t~H~ 437 (805)
...+.+.+...||+++.|-.. + ++...+. +-..|||+++.+..
T Consensus 83 ~~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 83 SAALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 345555556689999988753 2 3433222 34579999988875
No 260
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=21.03 E-value=1.4e+03 Score=26.97 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHcCCCCcEEEecCCCCcCChHHHHHHHHccCcEEEeCCCCCCCcHHHHHHH--HcCCcEEE
Q 003661 622 AEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAM--TCGLPTFA 691 (805)
Q Consensus 622 ~e~~~l~~li~~l~L~~~V~flG~~~~~v~~~el~~~la~aaDvfV~PS~~E~fGltvlEAM--A~GlPVVa 691 (805)
....+++++.+.+|+.-++.|.+ ..+.+++.+. . .+++-|.++.. +|....+.| -+|.|.+.
T Consensus 175 ~D~~elkrlL~~lGi~vn~v~p~----g~s~~dl~~l-~-~A~~NIv~~~~--~g~~~A~~Le~~fGiP~i~ 238 (511)
T TIGR01278 175 HDLIELRRLLKTLGIEVNVVAPW----GASIADLARL-P-AAWLNICPYRE--IGLMAAEYLKEKFGQPYIT 238 (511)
T ss_pred HHHHHHHHHHHHCCCeEEEEeCC----CCCHHHHHhc-c-cCcEEEEechH--HHHHHHHHHHHHhCCCccc
Confidence 34678899999999988888876 3456777764 4 36677766442 567777777 67999874
No 261
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=21.01 E-value=2.3e+02 Score=31.98 Aligned_cols=106 Identities=19% Similarity=0.145 Sum_probs=53.6
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCC-CCCCccccc-----eeeecCccCeEEEEeccCcCCc
Q 003661 299 TGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPD-AVGTTCGQR-----LEKVYGTKYSDILRVPFRTEKG 372 (805)
Q Consensus 299 tGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~-~~g~~~~~~-----~e~i~~~~~v~Ilrvp~~~~~~ 372 (805)
+||+-.-|. |.-|+++||+|. =++-...+ ..+..|... .+.+...-|+....+.|
T Consensus 11 SGGVDSSVa----------A~lLk~QGyeVi----Gl~m~~~~~~~~~~C~s~~d~~da~~va~~LGIp~~~vdf----- 71 (356)
T COG0482 11 SGGVDSSVA----------AYLLKEQGYEVI----GLFMKNWDEDGGGGCCSEEDLRDAERVADQLGIPLYVVDF----- 71 (356)
T ss_pred cCCHHHHHH----------HHHHHHcCCeEE----EEEEEeeccCCCCcCCchhHHHHHHHHHHHhCCceEEEch-----
Confidence 578766655 445899999998 66554433 222233321 22233222344444433
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHcC----CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003661 373 VVRKWISRFEVWPYLETYTEDVAVEIAKELQ----GKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHAL 438 (805)
Q Consensus 373 ~l~~~isr~~i~~~l~~f~~~~~~~i~~~~~----~kPDIIh~h~~~~~lva~llar~lgip~v~t~H~l 438 (805)
-+.|-..+....+.+.. -.|||. ||...-.-.+.-.+..+|.-.+.|-|-.
T Consensus 72 --------------~~~y~~~V~~~f~~~Y~~G~TPNPci~-CN~~iKF~~~l~~a~~lgad~iATGHYa 126 (356)
T COG0482 72 --------------EKEFWNKVFEYFLAEYKAGKTPNPCIL-CNKEIKFKALLDYAKELGADYIATGHYA 126 (356)
T ss_pred --------------HHHHHHHHHHHHHHHHhCCCCCCcchh-cCHHHHHHHHHHHHHHcCCCeEEEeeeE
Confidence 33444333333333332 246654 4443321222233445899999999953
No 262
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=20.74 E-value=1.1e+03 Score=25.46 Aligned_cols=122 Identities=11% Similarity=0.095 Sum_probs=73.2
Q ss_pred CCcEEEEEeeccC--CCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCC
Q 003661 569 NKPILFTMARLDR--VKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQ 646 (805)
Q Consensus 569 ~k~vIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~ 646 (805)
+.|++ .|+-..+ ..|++.+++.+++. .+.=+++=|-|. ++..++.+.++++|+. .|.++...
T Consensus 91 ~~p~v-lm~Y~N~i~~~G~e~F~~~~~~a-----GvdgviipDLP~---------ee~~~~~~~~~~~gi~-~I~lv~Pt 154 (263)
T CHL00200 91 KAPIV-IFTYYNPVLHYGINKFIKKISQA-----GVKGLIIPDLPY---------EESDYLISVCNLYNIE-LILLIAPT 154 (263)
T ss_pred CCCEE-EEecccHHHHhCHHHHHHHHHHc-----CCeEEEecCCCH---------HHHHHHHHHHHHcCCC-EEEEECCC
Confidence 44543 6776654 55999998888765 467777777765 4567888999999994 57777733
Q ss_pred CCcCChHHHHHHHHccCcEEEeC-CCCC------CCcHHHHHHH-----HcCCcEEEcCcccc-----ccccccCceEEE
Q 003661 647 MNRVRNGELYRYICDTKGAFVQP-ALYE------AFGLTVVEAM-----TCGLPTFATCKGGP-----AEIIVNGKSGYH 709 (805)
Q Consensus 647 ~~~v~~~el~~~la~aaDvfV~P-S~~E------~fGltvlEAM-----A~GlPVVat~~GG~-----~EiI~dg~~G~l 709 (805)
+ ..+....+++.++-||.- |..- ..+-.+.|.. .+++|+.+ ..|-- .++...|-.|++
T Consensus 155 T----~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v-GFGI~~~e~~~~~~~~GADGvV 229 (263)
T CHL00200 155 S----SKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIIL-GFGISTSEQIKQIKGWNINGIV 229 (263)
T ss_pred C----CHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEE-ECCcCCHHHHHHHHhcCCCEEE
Confidence 3 344444444456633332 2311 2333344444 67899887 23322 223444567888
Q ss_pred EC
Q 003661 710 ID 711 (805)
Q Consensus 710 i~ 711 (805)
+-
T Consensus 230 VG 231 (263)
T CHL00200 230 IG 231 (263)
T ss_pred EC
Confidence 84
No 263
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=20.70 E-value=89 Score=35.85 Aligned_cols=38 Identities=24% Similarity=0.573 Sum_probs=27.8
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecCCCCCCCC
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGT 345 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~~~~~~g~ 345 (805)
|||++|....+ |+++|.. |.+.||+|. .|+| +|+.+|.
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~ 38 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGK 38 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCC
Confidence 78999976655 7888877 899999986 2444 5666554
No 264
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=20.50 E-value=1.3e+02 Score=31.61 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=21.5
Q ss_pred CCCCCcccchhhhHHHHHHHHHHHHHHHHHCCCceeeceeEEecC
Q 003661 294 LGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRL 338 (805)
Q Consensus 294 lG~pdtGG~~vyv~d~araL~~eLa~~L~~~Gh~V~~~I~VvT~~ 338 (805)
+..+.+|++.. .|+++|.++|++|+ ++++.
T Consensus 20 itN~SSG~iG~-----------aLA~~L~~~G~~V~----li~r~ 49 (229)
T PRK06732 20 ITNHSTGQLGK-----------IIAETFLAAGHEVT----LVTTK 49 (229)
T ss_pred ecCccchHHHH-----------HHHHHHHhCCCEEE----EEECc
Confidence 45566676655 56677889999998 87754
No 265
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=20.44 E-value=7.7e+02 Score=28.51 Aligned_cols=102 Identities=10% Similarity=0.020 Sum_probs=63.9
Q ss_pred CcEEEEEeeccCCCCHHHHHHHHHHhHccCCCeEEEEEeCCCCCCCccHHHHHHHHHHHHHHHHcCCCCcEEEecCCCCc
Q 003661 570 KPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNR 649 (805)
Q Consensus 570 k~vIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~d~ee~~e~~~l~~li~~l~L~~~V~flG~~~~~ 649 (805)
..+.+..+...+..-..-|++++ ++.+|++++++.-..+.. .+...+.++-.-.+.++..-
T Consensus 50 p~vWiHaaSVGEv~a~~pLv~~l---~~~~P~~~ilvTt~T~Tg-------------~e~a~~~~~~~v~h~YlP~D--- 110 (419)
T COG1519 50 PLVWIHAASVGEVLAALPLVRAL---RERFPDLRILVTTMTPTG-------------AERAAALFGDSVIHQYLPLD--- 110 (419)
T ss_pred CeEEEEecchhHHHHHHHHHHHH---HHhCCCCCEEEEecCccH-------------HHHHHHHcCCCeEEEecCcC---
Confidence 34667777888877777777665 556799999988866541 12233344433456666521
Q ss_pred CChHHHHHHHHc-cCcEEEeCCCCCCCcHHHHHHHHcCCcEEEc
Q 003661 650 VRNGELYRYICD-TKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 692 (805)
Q Consensus 650 v~~~el~~~la~-aaDvfV~PS~~E~fGltvlEAMA~GlPVVat 692 (805)
....+.++++. .-|+.|.- -.|=+|+++.|+-..|+|++--
T Consensus 111 -~~~~v~rFl~~~~P~l~Ii~-EtElWPnli~e~~~~~~p~~Lv 152 (419)
T COG1519 111 -LPIAVRRFLRKWRPKLLIIM-ETELWPNLINELKRRGIPLVLV 152 (419)
T ss_pred -chHHHHHHHHhcCCCEEEEE-eccccHHHHHHHHHcCCCEEEE
Confidence 22344455532 13444432 3466999999999999999864
No 266
>PF05908 DUF867: Protein of unknown function (DUF867); InterPro: IPR008585 This family consists of a number of bacterial and phage proteins with no known function and which are found in Bacillus species and the Lambda-like viruses.; PDB: 3A9L_A.
Probab=20.21 E-value=79 Score=32.53 Aligned_cols=24 Identities=33% Similarity=0.559 Sum_probs=19.2
Q ss_pred ceEEEEcccccccccCcCCCCCcccchhhhHHHHHHH
Q 003661 277 FNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRAL 313 (805)
Q Consensus 277 ~rI~iis~h~~~~~~~~lG~pdtGG~~vyv~d~araL 313 (805)
-+|+|++||| ||++.-+.++|+++
T Consensus 27 s~vlvlApHG-------------GgIE~gTsElA~~i 50 (194)
T PF05908_consen 27 SDVLVLAPHG-------------GGIEPGTSELAEAI 50 (194)
T ss_dssp SSEEEEEEEE-------------ETTSTTHHHHHHHH
T ss_pred CcEEEEeccc-------------CccCcCHHHHHHHH
Confidence 3689999998 89999999555544
Done!