Query 003664
Match_columns 805
No_of_seqs 448 out of 2139
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 03:42:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003664.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003664hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1737 Oxysterol-binding prot 100.0 2E-125 5E-130 1094.2 41.6 690 82-795 67-799 (799)
2 KOG2209 Oxysterol-binding prot 100.0 6E-107 1E-111 839.0 16.9 379 410-795 24-445 (445)
3 PF01237 Oxysterol_BP: Oxyster 100.0 7.1E-95 1.5E-99 800.8 24.3 343 429-781 1-353 (354)
4 KOG2210 Oxysterol-binding prot 100.0 2.5E-63 5.4E-68 541.6 21.4 330 425-781 32-378 (392)
5 cd01247 PH_GPBP Goodpasture an 99.9 6.9E-23 1.5E-27 184.6 12.1 89 95-221 1-90 (91)
6 PF15413 PH_11: Pleckstrin hom 99.8 1.2E-20 2.6E-25 176.3 8.3 110 95-222 1-112 (112)
7 cd01265 PH_PARIS-1 PARIS-1 ple 99.8 4.5E-20 9.7E-25 167.6 10.9 89 95-223 1-94 (95)
8 cd01251 PH_centaurin_alpha Cen 99.8 1.4E-18 3E-23 160.1 11.7 90 95-224 1-101 (103)
9 cd01233 Unc104 Unc-104 pleckst 99.8 2.6E-18 5.7E-23 157.3 12.1 91 93-223 2-98 (100)
10 cd01264 PH_melted Melted pleck 99.7 6.2E-18 1.3E-22 154.6 11.2 89 95-222 2-100 (101)
11 cd01238 PH_Tec Tec pleckstrin 99.7 1.5E-17 3.3E-22 154.0 11.2 91 94-222 1-106 (106)
12 cd01235 PH_SETbf Set binding f 99.7 2.2E-17 4.7E-22 150.4 11.4 88 96-223 2-101 (101)
13 cd01246 PH_oxysterol_bp Oxyste 99.7 6.8E-17 1.5E-21 143.4 11.8 90 95-222 1-91 (91)
14 cd01260 PH_CNK Connector enhan 99.7 6.4E-17 1.4E-21 146.5 11.1 88 95-222 2-96 (96)
15 PF15409 PH_8: Pleckstrin homo 99.7 4.2E-17 9.2E-22 145.3 9.7 86 97-223 1-89 (89)
16 cd01236 PH_outspread Outspread 99.7 1.8E-16 3.8E-21 146.1 10.8 87 96-221 2-102 (104)
17 cd01252 PH_cytohesin Cytohesin 99.7 8.6E-16 1.9E-20 146.2 12.9 92 95-226 2-116 (125)
18 cd01257 PH_IRS Insulin recepto 99.6 1.1E-15 2.3E-20 140.4 11.8 90 93-221 2-100 (101)
19 cd01266 PH_Gab Gab (Grb2-assoc 99.6 9.4E-16 2E-20 142.4 10.9 88 95-222 1-107 (108)
20 cd01250 PH_centaurin Centaurin 99.6 2.7E-15 5.8E-20 133.9 10.8 90 95-222 1-94 (94)
21 cd01241 PH_Akt Akt pleckstrin 99.6 6.2E-15 1.3E-19 135.6 11.3 93 94-223 2-102 (102)
22 cd01245 PH_RasGAP_CG5898 RAS G 99.5 2.1E-14 4.5E-19 131.0 8.6 85 96-221 2-97 (98)
23 PF00169 PH: PH domain; Inter 99.5 1.3E-13 2.9E-18 123.0 13.2 93 94-223 2-103 (104)
24 cd01244 PH_RasGAP_CG9209 RAS_G 99.5 6.3E-14 1.4E-18 128.0 10.7 85 97-222 5-98 (98)
25 cd01219 PH_FGD FGD (faciogenit 99.5 6.2E-13 1.3E-17 122.2 12.1 96 94-224 3-100 (101)
26 cd01237 Unc112 Unc-112 pleckst 99.4 2.2E-12 4.7E-17 118.4 9.3 80 106-223 17-103 (106)
27 cd01263 PH_anillin Anillin Ple 99.3 3.7E-12 8.1E-17 120.7 10.2 91 95-222 3-122 (122)
28 KOG0930 Guanine nucleotide exc 99.3 4.4E-12 9.5E-17 131.7 10.1 98 91-228 258-380 (395)
29 smart00233 PH Pleckstrin homol 99.3 3E-11 6.5E-16 105.9 12.7 93 94-223 2-101 (102)
30 cd01254 PH_PLD Phospholipase D 99.3 1.4E-11 3.1E-16 116.9 9.7 75 108-222 32-121 (121)
31 cd01253 PH_beta_spectrin Beta- 99.2 1.3E-10 2.7E-15 106.9 10.5 90 95-222 1-104 (104)
32 KOG1739 Serine/threonine prote 99.2 6E-11 1.3E-15 130.9 9.1 94 93-224 24-117 (611)
33 cd01220 PH_CDEP Chondrocyte-de 99.2 3.1E-10 6.8E-15 104.1 11.7 93 94-224 3-98 (99)
34 cd00821 PH Pleckstrin homology 99.1 2.8E-10 6E-15 98.8 9.7 91 95-222 1-96 (96)
35 KOG1090 Predicted dual-specifi 99.0 1E-10 2.2E-15 136.7 3.0 93 91-223 1632-1731(1732)
36 KOG0690 Serine/threonine prote 99.0 2.4E-10 5.2E-15 122.0 5.1 101 90-227 12-120 (516)
37 cd00900 PH-like Pleckstrin hom 99.0 5.7E-09 1.2E-13 91.2 11.6 87 96-222 2-99 (99)
38 cd01230 PH_EFA6 EFA6 Pleckstri 98.9 8E-09 1.7E-13 97.5 11.4 100 95-227 2-115 (117)
39 PF14593 PH_3: PH domain; PDB: 98.7 7.1E-08 1.5E-12 89.1 9.8 92 90-226 10-102 (104)
40 cd01256 PH_dynamin Dynamin ple 98.7 9.9E-08 2.2E-12 85.9 10.2 90 93-222 1-104 (110)
41 cd01218 PH_phafin2 Phafin2 Pl 98.6 2.7E-07 5.8E-12 85.5 11.6 94 94-226 5-101 (104)
42 cd01249 PH_oligophrenin Oligop 98.4 7.1E-07 1.5E-11 82.1 8.5 47 175-221 53-103 (104)
43 PF15410 PH_9: Pleckstrin homo 98.3 2.3E-06 5E-11 81.1 9.8 103 95-223 2-118 (119)
44 KOG0521 Putative GTPase activa 98.3 2.9E-07 6.3E-12 111.3 2.4 97 92-228 273-373 (785)
45 cd01243 PH_MRCK MRCK (myotonic 98.2 6.6E-06 1.4E-10 77.2 10.1 99 92-224 1-120 (122)
46 cd01234 PH_CADPS CADPS (Ca2+-d 98.2 2.3E-06 5E-11 77.8 6.2 94 95-224 4-111 (117)
47 cd01242 PH_ROK Rok (Rho- assoc 98.2 1.2E-05 2.5E-10 74.5 10.2 91 95-222 2-109 (112)
48 cd01261 PH_SOS Son of Sevenles 98.0 4.8E-05 1E-09 71.5 11.2 102 94-224 5-110 (112)
49 KOG3640 Actin binding protein 97.9 1.3E-05 2.8E-10 95.4 6.5 97 92-225 989-1108(1116)
50 KOG0248 Cytoplasmic protein Ma 97.8 8.5E-06 1.9E-10 93.9 3.0 96 93-226 249-344 (936)
51 cd01239 PH_PKD Protein kinase 97.8 9.8E-05 2.1E-09 68.9 9.3 88 95-222 2-117 (117)
52 cd01259 PH_Apbb1ip Apbb1ip (Am 97.8 0.00012 2.6E-09 68.0 9.7 100 95-223 2-108 (114)
53 cd01262 PH_PDK1 3-Phosphoinosi 97.8 8.3E-05 1.8E-09 66.6 8.1 86 94-223 2-88 (89)
54 PTZ00267 NIMA-related protein 97.5 0.00022 4.7E-09 82.7 8.0 98 92-224 376-477 (478)
55 cd01258 PH_syntrophin Syntroph 97.5 0.00027 5.9E-09 65.8 6.8 99 97-221 3-107 (108)
56 KOG3723 PH domain protein Melt 97.4 8.1E-05 1.8E-09 84.7 3.5 108 88-227 730-840 (851)
57 PLN00188 enhanced disease resi 97.4 0.0007 1.5E-08 80.4 10.6 97 92-226 3-112 (719)
58 KOG2059 Ras GTPase-activating 97.3 0.00048 1E-08 80.6 7.7 97 91-228 562-669 (800)
59 PF12814 Mcp5_PH: Meiotic cell 97.3 0.0017 3.7E-08 62.0 10.0 33 191-223 89-121 (123)
60 KOG0705 GTPase-activating prot 97.3 0.00011 2.5E-09 83.7 1.9 42 87-128 296-340 (749)
61 cd01222 PH_clg Clg (common-sit 97.2 0.0045 9.8E-08 56.8 10.9 87 94-223 5-95 (97)
62 PLN02866 phospholipase D 97.1 0.0029 6.3E-08 78.0 11.9 112 91-227 180-311 (1068)
63 cd01224 PH_Collybistin Collybi 96.9 0.011 2.3E-07 55.4 11.0 93 94-223 3-107 (109)
64 KOG1451 Oligophrenin-1 and rel 96.8 0.0026 5.7E-08 73.1 7.4 102 89-224 261-368 (812)
65 KOG3751 Growth factor receptor 96.7 0.0064 1.4E-07 69.4 9.1 107 88-224 312-425 (622)
66 PF15406 PH_6: Pleckstrin homo 96.6 0.0056 1.2E-07 56.7 6.4 50 171-221 62-111 (112)
67 KOG3531 Rho guanine nucleotide 96.3 0.0013 2.8E-08 78.1 0.8 97 92-228 923-1024(1036)
68 cd01221 PH_ephexin Ephexin Ple 96.3 0.027 5.8E-07 54.0 9.4 79 109-220 27-119 (125)
69 KOG1117 Rho- and Arf-GTPase ac 96.1 0.019 4.2E-07 68.7 9.0 91 91-221 490-599 (1186)
70 PF15404 PH_4: Pleckstrin homo 95.8 0.049 1.1E-06 55.7 9.2 32 95-126 1-32 (185)
71 KOG1117 Rho- and Arf-GTPase ac 95.6 0.0062 1.3E-07 72.7 2.4 94 91-225 85-179 (1186)
72 KOG4424 Predicted Rho/Rac guan 95.4 0.025 5.4E-07 65.6 6.1 102 92-228 271-374 (623)
73 KOG0932 Guanine nucleotide exc 95.2 0.024 5.1E-07 65.3 5.1 117 80-228 493-622 (774)
74 cd01240 PH_beta-ARK Beta adren 94.9 0.023 5E-07 52.7 3.4 92 93-225 3-100 (116)
75 cd01226 PH_exo84 Exocyst compl 94.6 0.29 6.3E-06 45.2 9.5 52 173-224 45-99 (100)
76 KOG0248 Cytoplasmic protein Ma 94.3 0.014 3.1E-07 68.3 0.5 89 91-222 257-347 (936)
77 cd01228 PH_BCR-related BCR (br 94.1 0.27 5.8E-06 44.9 8.1 90 94-223 4-94 (96)
78 cd01232 PH_TRIO Trio pleckstri 93.9 0.95 2.1E-05 42.9 11.8 52 173-224 56-113 (114)
79 PTZ00283 serine/threonine prot 93.4 0.17 3.6E-06 59.4 7.3 35 190-224 455-490 (496)
80 cd01248 PH_PLC Phospholipase C 93.2 0.65 1.4E-05 43.6 9.6 34 188-221 77-114 (115)
81 KOG3543 Ca2+-dependent activat 92.8 0.042 9.1E-07 63.7 1.0 93 92-225 463-567 (1218)
82 cd01225 PH_Cool_Pix Cool (clon 91.0 1.1 2.5E-05 42.0 8.1 79 107-222 26-108 (111)
83 cd01227 PH_Dbs Dbs (DBL's big 88.4 5.5 0.00012 38.8 10.9 54 172-225 61-117 (133)
84 cd01223 PH_Vav Vav pleckstrin 86.8 5.2 0.00011 38.1 9.4 34 192-225 78-113 (116)
85 KOG3727 Mitogen inducible gene 83.8 0.21 4.5E-06 57.9 -1.6 53 172-224 400-459 (664)
86 PF15408 PH_7: Pleckstrin homo 83.7 0.59 1.3E-05 41.8 1.5 32 96-129 1-32 (104)
87 KOG4807 F-actin binding protei 82.2 0.021 4.6E-07 63.0 -9.8 79 108-223 34-114 (593)
88 KOG1738 Membrane-associated gu 80.9 1.1 2.3E-05 53.2 2.6 39 91-129 560-601 (638)
89 KOG3551 Syntrophins (type beta 75.6 1.6 3.4E-05 49.0 1.8 98 93-221 292-399 (506)
90 KOG0592 3-phosphoinositide-dep 75.3 3.9 8.4E-05 48.1 5.0 91 92-227 450-541 (604)
91 KOG1170 Diacylglycerol kinase 74.2 0.17 3.8E-06 60.6 -6.2 90 95-225 4-96 (1099)
92 KOG3520 Predicted guanine nucl 68.0 6 0.00013 50.2 4.7 58 172-229 666-727 (1167)
93 PF15405 PH_5: Pleckstrin homo 64.9 7.6 0.00017 37.9 3.8 24 200-223 112-135 (135)
94 cd01231 PH_Lnk LNK-family Plec 59.6 44 0.00096 31.2 7.4 37 186-222 70-107 (107)
95 KOG3531 Rho guanine nucleotide 48.6 11 0.00023 46.4 2.1 98 93-229 750-850 (1036)
96 KOG4236 Serine/threonine prote 46.2 65 0.0014 38.4 7.7 38 185-223 474-523 (888)
97 PF08458 PH_2: Plant pleckstri 42.9 40 0.00086 31.9 4.5 34 191-224 71-104 (110)
98 KOG4424 Predicted Rho/Rac guan 40.2 21 0.00046 42.3 2.8 93 93-225 497-597 (623)
99 KOG3523 Putative guanine nucle 39.6 44 0.00096 40.0 5.2 20 201-220 572-591 (695)
100 PF14254 DUF4348: Domain of un 36.2 44 0.00096 36.3 4.2 40 588-627 225-266 (273)
101 PF10146 zf-C4H2: Zinc finger- 32.1 1.1E+02 0.0023 32.8 6.3 27 276-302 51-77 (230)
102 KOG3551 Syntrophins (type beta 30.3 46 0.00099 37.9 3.3 54 172-225 214-273 (506)
103 cd01255 PH_TIAM TIAM Pleckstri 30.1 2.6E+02 0.0056 27.9 7.9 28 198-225 129-156 (160)
104 KOG3003 Molecular chaperone of 28.6 1.2E+02 0.0025 32.5 5.8 40 504-555 181-221 (236)
105 KOG2070 Guanine nucleotide exc 26.4 91 0.002 36.6 4.8 79 107-222 323-405 (661)
106 PF10504 DUF2452: Protein of u 24.8 61 0.0013 32.6 2.7 24 507-530 86-109 (159)
107 cd05135 RasGAP_RASAL Ras GTPas 20.1 30 0.00066 38.8 -0.4 24 93-116 303-332 (333)
No 1
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-125 Score=1094.23 Aligned_cols=690 Identities=39% Similarity=0.622 Sum_probs=553.3
Q ss_pred CccccccCCCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccc
Q 003664 82 PVDVKINDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKE 161 (805)
Q Consensus 82 ~~~~~~~~~~~~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~ 161 (805)
..+..... .+..++|||+||+|+++||++|||+|.+|.|+||++.+..+.............|+.+...-+.+..-+..
T Consensus 67 ~~~~~~~~-~~~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~q 145 (799)
T KOG1737|consen 67 TSEAGIKK-SGASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTAWIQNGERMDICSVDGSCQ 145 (799)
T ss_pred cccccccc-ccccccceeeccccccCCcccceEEecCcceeeeccCCccccCCCCcccccccccccCCCcccchhhcccc
Confidence 33333444 66778999999999999999999999999999999999988777766667677777654322222222122
Q ss_pred cchh----cccCCCcccEEEcC-ccEEEecCCCCCcEEEEeCCeEEEEEcCC---H-HHHHHHHHHHHHHHHhcccccCC
Q 003664 162 TTSQ----RLLNRKPFGEVHLK-VSSIRDSKSDDKRFSIFTGTKRLHLRAET---R-EDRFAWMEALQAVKDMFPRMSNS 232 (805)
Q Consensus 162 ~~~~----~~~~~~p~G~I~L~-~ssi~~~~~d~~rF~I~t~~kt~~LrAes---~-~dr~~WI~AL~~a~~~~~~~~~~ 232 (805)
.+|. ....+...+.++|. ...++.. ++..++.+.+.+++.+++.+. . .++..|+++++.+..+.+.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (799)
T KOG1737|consen 146 IYLVELSKKLQRQGWLHALELAPLIAVEQT-SEYENENKSVMTKRIPLSIAVISVAQETREINVDVLRLLSSLPNLTGQL 224 (799)
T ss_pred hhhhhhhHHHhhcchhhhhhhccchhhhcc-ccccccccccccccccchhhhhcccccchhhhhhhhhhccccccchhhh
Confidence 2221 13344567788887 6677777 778889999899998888775 3 78899999999999998874322
Q ss_pred C--CC-----CCC------CcchhhhHHHHHHHHHhhhhHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003664 233 E--LM-----APM------DSIQVSTEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLET 299 (805)
Q Consensus 233 ~--~~-----~~~------~~~~~s~~~lr~~l~ee~~~~~lik~~E~i~~~e~s~l~~ql~~lk~~~~~lld~L~~Le~ 299 (805)
. .. ... ..+...++++.+++..++.+...+++||+++++++...+.++.++.++...+.++|++||.
T Consensus 225 ~~r~l~~~~~~~~~~s~s~~k~~~~~e~~~~k~~~s~~s~~a~~~~e~~~~s~~~~~s~~s~~~~~q~~~l~~~l~~le~ 304 (799)
T KOG1737|consen 225 LLRELNALLEDKKEQSSSKSKLQERTERIALKVLTSLASVFAECDDEAELLSQSRIESDASHSESEQRIRLQEALSALEN 304 (799)
T ss_pred hhhhhccccccccccccchhhhHHHHHHHHHHHhhhhHHHHhHHHHHHHHHHHhHhhhhhhcchhhhhhhhhhHHHHHHh
Confidence 1 11 111 1134458889999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccceecchhhhhhccccccccccCCCCCCCCCCCCCCcccCCCCCCCcccccccccccccccc--ccccc-----
Q 003664 300 EKVDLENTVVDESQRQLIDQDASSTLRQDKFSEGTTESDDDNERVDGVEDETDEDENTFFDTRDFLSS--SSLRS----- 372 (805)
Q Consensus 300 ~k~~le~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~de~~f~d~~~~~~~--~~~~~----- 372 (805)
++.+||..+......+...... ..+..+. ..........+++++|||+.+.++. ....+
T Consensus 305 q~~~le~a~~~~~~~~~~~~~~-----------~~~~~~~---~~~~~~~~~~~e~~e~~da~s~~s~~~~~~~s~~~~e 370 (799)
T KOG1737|consen 305 QNTDLEVALRRAHAAQAALDLS-----------KVTRLSL---LHEEESFSESDELTEQFDAESSLSDAQESLDSNSESE 370 (799)
T ss_pred hhhhHHHHHhHhhhhhhccCcc-----------ccccccc---cccccccccccccccccccccccchhhhccCCccccc
Confidence 9999988764211121111000 0011000 0012334445566788888775431 00101
Q ss_pred -CCCCCCCCCCC-C-Cchhhhhcccccccc----cccccccccCccccccccCCCcccccccchhHHHHhhhcCCCCCcc
Q 003664 373 -NGSDFRSSSFS-S-DEESLQIVESENDID----ASIRFVGTNYPYIKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTKI 445 (805)
Q Consensus 373 -~~~~~~~~~~~-~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~rR~~lP~~~~~~~~~~lwsilK~~iGkDLsrI 445 (805)
.++....+... . ........ +.|... ..........+..+||++||+|..++.+++||+|||++||||||+|
T Consensus 371 ~~~s~~~~s~~s~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~rr~~lp~~~~~~~~islw~~~k~~iGkDlskv 449 (799)
T KOG1737|consen 371 NEGSEDEESYTSDISDNGSSDAL-SADGDKSSQALNEKVPSGSGAEVARRTNLPAPSKPSSSISLWSILRNNIGKDLSKV 449 (799)
T ss_pred ccccccccccccccccCCCcccc-ccccccccccccccccccccccccccccCCCCcCcCCCccHHHHHhhccccccccc
Confidence 11111111000 0 00000000 000000 0000000013457999999999888999999999999999999999
Q ss_pred ccccccccCCChhHhhhhhccchHHHHHHHhcCCCCCHHHHHHHHHHHHhhhccccCCCcCCCCCCCCCCeEEEEeCCCC
Q 003664 446 CLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKG 525 (805)
Q Consensus 446 slPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~aF~vS~y~~~~~r~~KPfNPiLGETfe~~~~d~g 525 (805)
+|||+||||+|+|||++|+|||++|||+|+++ +|+++||+||+||++|+|+.+..|.+|||||||||||||+++|+|
T Consensus 450 ~~PV~~nEP~S~LQr~~EdlEYs~LLd~A~~~---~d~~~R~~~vaafavS~Ya~t~~r~~KPFNPlLgETyE~~r~dkg 526 (799)
T KOG1737|consen 450 SMPVEFNEPLSLLQRVAEDLEYSELLDKAANY---EDPLERMVYVAAFAVSSYSSTSRRTAKPFNPLLGETYEMDRPDKG 526 (799)
T ss_pred ccceecCCcchHHHHhhhhccchhhhHHHHhc---CCcHHHHHHHHHHHhhhcchhcccccCCCCcccccceEeeccCCc
Confidence 99999999999999999999999999999997 789999999999999999999999999999999999999999999
Q ss_pred EEEEEEecccCCccceeEEecCcEEEEEEeeeeEEEEEeEEEEEeeeEEEEEecC-CceEEecccceeeeeeccceeeEe
Q 003664 526 LQFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDD-GEVFQWSKVTSSIYNLILGKLYCD 604 (805)
Q Consensus 526 ~rfiaEQVSHHPPisA~~~e~~g~~~~g~~~~kskF~G~Si~v~~~G~~~l~f~~-gE~Y~~~~pt~~v~nii~G~~~~e 604 (805)
+|||+|||||||||+|||||+++|.+||++.+++||||+||+|.|+|.++|+|++ |++|+|.+|+++|+|||+|++|||
T Consensus 527 ~rf~sEqVSHhPPi~A~h~es~~w~~~~ds~~~sKF~Gksi~v~P~G~l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~D 606 (799)
T KOG1737|consen 527 LRFFSEQVSHHPPISACHAESNNWTFWGDSKVKSKFWGKSIEVPPLGILHVTLKNIGEHYSWAKVTTTVHNIILGKLWVD 606 (799)
T ss_pred eeeeeeeeccCCCcccccccCCCceeeccccccccccccceeecCCceEEEEEcCCCccccccCccceecceeecccccc
Confidence 9999999999999999999999999999999999999999999999999999985 999999999999999999999999
Q ss_pred eceeEEEEeCC-c-ceEEEEEeecccccCCCcEEEEEEEcCCCcEEEEEEeeecceEEEEecccCCCCcccccCCccEEE
Q 003664 605 HYGTMRIEGNR-E-YSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLL 682 (805)
Q Consensus 605 ~~G~~~I~~~t-g-~~~~i~F~~k~~~~~~~~~V~G~V~d~~g~~~~~i~G~Wd~~l~~~~~~~~~k~k~~~~~~~~~~l 682 (805)
++|.|.|++++ + .+|.|+|++.+||+++.|+|+|.|+|.+|++++++.|+|++.|++..++..+ ...+.....++
T Consensus 607 ~~ge~~i~n~~~~~~~c~L~F~~~~~~~~~~~ev~g~V~~~s~~~~~~l~GkW~e~~~~~~~~~~~---~~~~~~~~~~i 683 (799)
T KOG1737|consen 607 HYGEMEITNHTTGSDKCKLKFVKAGYFSRNAREVEGSVRNKSGKKVEVLTGKWDESLYYFKVDKVG---LPEPETSEKLI 683 (799)
T ss_pred ccccEEEecCCCCcceeEEEEeeecccCCCcceeEEEEeCCCCceeEEEeeeehhhhhhccccccc---cccCCccceee
Confidence 99999999964 4 5699999999999999999999999999999999999999999997776543 34455678999
Q ss_pred EecCCCCCCCCccccccceeeccCCCccccCCCCCCCCCchhhhhHHHcCCHHHHHHHHHHHHHHHHHHHHhcc---CCC
Q 003664 683 WKRSKPPKYPTRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQE---NGW 759 (805)
Q Consensus 683 W~~~~~p~~~~~y~~t~fai~LNel~~~~~~~l~pTDSR~RpD~raLe~Gd~d~A~~eK~rLEe~QR~~Rk~re---~~~ 759 (805)
|++++.|+| .+|+||.|||+||+++|.+.+.|||||||+|||||+||+|+|++|+.||.||||+||++|+.|+ ..|
T Consensus 684 Wk~~~~Pkn-~~y~ft~fai~LNel~p~l~~~lpPTDSRlRPDqr~lE~G~~~~a~~EK~rlEe~QR~~r~~re~~~~~~ 762 (799)
T KOG1737|consen 684 WKANDLPKN-NKYNFTGFAIELNELTPHLKKLLPPTDSRLRPDQRALENGEYDEANAEKLRLEEKQRARRRKREENGEEY 762 (799)
T ss_pred eecCCCCCC-cccccchhheecccCCchhhccCCCCCcccCcchhhhhccChhhhhhhhHhHHHHHHHHHHHHHhhcccc
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999988764 359
Q ss_pred ccceeEEcCCCC-ceEEcCCchhhhcCCCCCCCCCCC
Q 003664 760 KPRWFAKDRATG-TYRYIGGYWEARETGDWNLCPDIF 795 (805)
Q Consensus 760 ~P~~F~~~~~~~-~~~y~g~YWe~r~~~~w~~~~dif 795 (805)
+|+||.++++.. .|+|+|+||++|++.+|..|+|||
T Consensus 763 ~prwF~~~~~~~~~~~~ng~Ywe~r~~~d~~~~~~if 799 (799)
T KOG1737|consen 763 EPRWFEKVKDPSTYWVYNGGYWEAREKQDWKDCPDIF 799 (799)
T ss_pred ccccccccCCCcceEEecCchheeecccCccccccCC
Confidence 999999998765 899999999999999999999998
No 2
>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-107 Score=838.95 Aligned_cols=379 Identities=42% Similarity=0.772 Sum_probs=350.9
Q ss_pred ccccccccCCCcccccccchhHHHHhhhcCCCCCccccccccccCCChhHhhhhhccchHHHHHHHhcCCCCCHHHHHHH
Q 003664 410 PYIKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILN 489 (805)
Q Consensus 410 ~~~~rR~~lP~~~~~~~~~~lwsilK~~iGkDLsrIslPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~ 489 (805)
...+.||+||+|+.....+|||+|||+||||||+||+|||+||||+|||||++|.|+|.+||.+|+.+ .||+|||.|
T Consensus 24 ~~hk~RT~LPa~m~sr~d~SIW~Ilr~ciGkelSkiTmPV~~NEPLSFLQRltEyme~~yLi~kAs~~---~~p~eRmqy 100 (445)
T KOG2209|consen 24 GIHKHRTSLPAPMFSRNDFSIWSILRKCIGKELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSQ---SDPVERMQY 100 (445)
T ss_pred hhhhhcccCCccccccccccHHHHHHhhhchhhhheeeeeeeCCcHHHHHHHHHHHHHHHHHHHHhhC---CChHHHHHH
Confidence 34569999999999999999999999999999999999999999999999999999999999999985 899999999
Q ss_pred HHHHHhhhccccCCCcCCCCCCCCCCeEEEEeCCCCEEEEEEecccCCccceeEEe--cCcEEEEEEeeeeEEEEEeEEE
Q 003664 490 VAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLQFFSEKVSHHPMIVACHCQ--GTGWKFWGDSNLKSKFWGRSIQ 567 (805)
Q Consensus 490 V~aF~vS~y~~~~~r~~KPfNPiLGETfe~~~~d~g~rfiaEQVSHHPPisA~~~e--~~g~~~~g~~~~kskF~G~Si~ 567 (805)
|+|||||+.++...|+.||||||||||||+.+.|.|+|||||||||||||||||+| +..+.|+|.+.++.||||+||+
T Consensus 101 VAAFAvsavas~weR~gKPFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl~~dF~fhGsi~PklkFWgksve 180 (445)
T KOG2209|consen 101 VAAFAVSAVASQWERTGKPFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVE 180 (445)
T ss_pred HHHHHHHHHHHhHHHhcCCCcchhhhhhhheecccceEEeehhhccCCChhHhhhcccCcceEEeeeecccceeccceee
Confidence 99999999999888999999999999999999999999999999999999999999 5789999999999999999999
Q ss_pred EEeeeEEEEEec-CCceEEecccceeeeeeccceeeEeeceeEEEEeC-CcceEEEEEeecccccCCCcEEEEEEEcCCC
Q 003664 568 LDPVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGN-REYSCKLKFKEQSIIDRNPHQVHGIVQDRNG 645 (805)
Q Consensus 568 v~~~G~~~l~f~-~gE~Y~~~~pt~~v~nii~G~~~~e~~G~~~I~~~-tg~~~~i~F~~k~~~~~~~~~V~G~V~d~~g 645 (805)
+.|.|.++|+|. +||.|+|+.|+++|||||+|++||+++|+|.|.++ ||+.|.+.|+++|+||++.|+|+|.|+|++.
T Consensus 181 a~Pkgtitle~~k~nEaYtWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~~~vl~Fk~~G~~gk~lHkVEG~i~d~~k 260 (445)
T KOG2209|consen 181 AEPKGTITLELLKHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGHKCVLNFKPCGLFGKELHKVEGHIQDKSK 260 (445)
T ss_pred cCCCceEEEEecccCcceeccCCcceeeeehhhhhhHhhcCcEEEEecCccceeEEecccccccccchhheeehhhcccc
Confidence 999999999996 79999999999999999999999999999999995 8999999999999999999999999999999
Q ss_pred cEEEEEEeeecceEEEEecccC-----------C-----CC------cc---------cccCCccEEEEecCCCCCCC-C
Q 003664 646 KTVATLFGKWDESIHYVIGECS-----------G-----KG------KE---------LESLSEACLLWKRSKPPKYP-T 693 (805)
Q Consensus 646 ~~~~~i~G~Wd~~l~~~~~~~~-----------~-----k~------k~---------~~~~~~~~~lW~~~~~p~~~-~ 693 (805)
++++.|.|+|.+.|+.++.... . +. ++ ....++.++||..++.|++. .
T Consensus 261 ~kl~~lYGkWTe~l~~cd~esf~~~~Kq~~r~~~~r~~s~~~~~see~dd~P~~ds~~v~~iPgSk~LW~~n~rP~n~~~ 340 (445)
T KOG2209|consen 261 KKLCALYGKWTECLYSCDPESFDAFKKQDKRNTEERKNSKQMSTSEELDDMPVPDSESVFIIPGSKLLWRINPRPPNSAQ 340 (445)
T ss_pred ccchhhhccHHHHHhcCCHHHHHHHHHhhhhcchhhhhhccCCchhhccCCCCCCcceeEecCCCeEEEEecCCCCCHHH
Confidence 9999999999999987643210 0 00 00 11134678999999988765 6
Q ss_pred ccccccceeeccCCCccccCCCCCCCCCchhhhhHHHcCCHHHHHHHHHHHHHHHHHHHHhc---cCCCccceeEEcCCC
Q 003664 694 RYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQ---ENGWKPRWFAKDRAT 770 (805)
Q Consensus 694 ~y~~t~fai~LNel~~~~~~~l~pTDSR~RpD~raLe~Gd~d~A~~eK~rLEe~QR~~Rk~r---e~~~~P~~F~~~~~~ 770 (805)
+|+||.||++|||+.+++...+||||||+|||+|+||+|++|+|.+||+||||+||++||.| +..|+|+||++.+..
T Consensus 341 ~y~FT~FalsLNem~~~M~~tl~pTD~RlRpDi~~mE~G~~D~AseeK~rlEEkQRe~Rk~rs~~~~dw~~rWF~~~~np 420 (445)
T KOG2209|consen 341 MYNFTSFALSLNEMDKGMESTLPPTDCRLRPDIRAMENGNIDQASEEKKRLEEKQREARKNRSKSEEDWKTRWFHQGPNP 420 (445)
T ss_pred hhchhhheeehhhhccCcccccCCcccccCchhhhhhcCCcchhHHHHHHHHHHHHHHHhhcccccccCcchhcccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988 567999999998643
Q ss_pred ----CceEEcCCchhhhcCCCCCCCCCCC
Q 003664 771 ----GTYRYIGGYWEARETGDWNLCPDIF 795 (805)
Q Consensus 771 ----~~~~y~g~YWe~r~~~~w~~~~dif 795 (805)
..|.|.||||+ +++++|||||
T Consensus 421 ~t~~~dWlYsGgYwd----R~ysn~~~i~ 445 (445)
T KOG2209|consen 421 YTGAQDWLYSGGYWD----RNYSNCPDIY 445 (445)
T ss_pred CCCcccceeecCccc----cccccCcccC
Confidence 46999999998 8999999998
No 3
>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related. These include mammalian oxysterol-binding protein (OSBP), a protein of about 800 amino-acid residues that binds a variety of oxysterols (oxygenated derivatives of cholesterol); yeast OSH1, a protein of 859 residues that also plays a role in ergosterol synthesis; yeast proteins HES1 and KES1, highly related proteins of 434 residues that seem to play a role in ergosterol synthesis; and yeast hypothetical proteins YHR001w, YHR073w and YKR003w.; PDB: 3SPW_A 1ZI7_C 1ZHW_A 1ZHX_A 1ZHY_A 1ZHZ_A 1ZHT_A.
Probab=100.00 E-value=7.1e-95 Score=800.84 Aligned_cols=343 Identities=48% Similarity=0.877 Sum_probs=266.3
Q ss_pred hhHHHHhhhcCCCCCccccccccccCCChhHhhhhhccchHHHHHHHhcCCCCCHHHHHHHHHHHHhhhccccCCCcCCC
Q 003664 429 SLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKP 508 (805)
Q Consensus 429 ~lwsilK~~iGkDLsrIslPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~aF~vS~y~~~~~r~~KP 508 (805)
|||++||+++|||||+|+|||+||||+|+|||++++|+|++||++|+.+ .||++||++|++|+||+|+.+..|++||
T Consensus 1 s~w~~lK~~~G~dLs~islPv~~~eP~S~Lqr~~~~~~y~~lL~~Aa~~---~d~~eR~~~V~~f~~S~~~~~~~~~~KP 77 (354)
T PF01237_consen 1 SIWSFLKQKIGKDLSRISLPVFFNEPRSFLQRLAEDFEYPDLLDKAAEE---DDPLERMLYVAAFALSSYSSTPGRTKKP 77 (354)
T ss_dssp HHHHHHHHT--S-GGGS---GGGEEEEEGGGGGGGGSSSHHHHHGGGGS----HHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHhhhcCCCChhcCccCceecCCCcHHHhhhhhhhChHHHhccCCC---CCHHHHHHHHHHHHHhhhhhhcCCCCcC
Confidence 6999999999999999999999999999999999999999999999874 8999999999999999999887788999
Q ss_pred CCCCCCCeEEEEeCCCCEEEEEEecccCCccceeEEecCcEEEEEEeeeeEEEEEeEEEEEeeeEEEEEecC-CceEEec
Q 003664 509 FNPLLGETYEADYPDKGLQFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDD-GEVFQWS 587 (805)
Q Consensus 509 fNPiLGETfe~~~~d~g~rfiaEQVSHHPPisA~~~e~~g~~~~g~~~~kskF~G~Si~v~~~G~~~l~f~~-gE~Y~~~ 587 (805)
|||||||||||.++ +|++|+||||||||||||||++++||+++|+..+++||+|+||++.+.|.++|+|++ ||+|+|+
T Consensus 78 fNPiLGETfe~~~~-~~~~~~aEQVSHHPPisa~~~~~~~~~~~g~~~~~~kf~g~sv~~~~~G~~~i~f~~~~e~Y~~~ 156 (354)
T PF01237_consen 78 FNPILGETFELVRP-DGTRFIAEQVSHHPPISAFHAEGRGWKFYGHIEPKSKFWGNSVEVNPIGKVTITFPDGGETYTWT 156 (354)
T ss_dssp E---TT-EE--TT--T-EEEEEEEEETTTTEEEEEEEETTEEEEEEEEEEEEE-TT-EEEEEEEEEEEEET--TEEEEEE
T ss_pred cCCCCcceeeeccC-ceEEEEEecccCCCCceEEEEEcCCEEEEEEEeeeEEEeceEEEEEECCcEEEEEcCCceEEEEe
Confidence 99999999999988 799999999999999999999999999999999999999999999999999999985 7999999
Q ss_pred ccceeeeeeccceeeEeeceeEEEEeC-CcceEEEEEeecccccCCCcEEEEEEEcCCCcEEEEEEeeecceEEEEeccc
Q 003664 588 KVTSSIYNLILGKLYCDHYGTMRIEGN-REYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGEC 666 (805)
Q Consensus 588 ~pt~~v~nii~G~~~~e~~G~~~I~~~-tg~~~~i~F~~k~~~~~~~~~V~G~V~d~~g~~~~~i~G~Wd~~l~~~~~~~ 666 (805)
+|++.|+||++|++|+|++|+|+|+|. +|++|+|+|+++|+|+++.|.|+|.|++.+|++++.|.|+||+.|++...+.
T Consensus 157 ~p~~~i~gi~~G~~~~e~~G~~~i~~~~tg~~~~i~f~~~~~f~~~~~~v~G~I~~~~~~~~~~i~G~W~~~i~~~~~~~ 236 (354)
T PF01237_consen 157 KPTTYIRGIIFGKRYIEHVGKMVITCHKTGLKAEIEFKPKGWFSGKSNEVEGKIYDSKGKPIYKISGKWDEEIYIKDVKN 236 (354)
T ss_dssp --SEEEESTTTTS-EEEEESEEEEEET-TS-EEEEEEETSSSTSSSTTEEEEEEESSGGG-SEEEEEETTSEEEEEETT-
T ss_pred cCcEEEeeeecccEEEEecCCEEEEcCCcceEEEEEEecCCcccccceeeEEEEEEccCceeEEeeeeeCCeEEEEeccc
Confidence 999999999999999999999999995 8999999999999999999999999999889999999999999999976552
Q ss_pred CCCCcccccCCccEEEEecCCCCCCC-CccccccceeeccCCCccccCCCCCCCCCchhhhhHHHcCCHHHHHHHHHHHH
Q 003664 667 SGKGKELESLSEACLLWKRSKPPKYP-TRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLE 745 (805)
Q Consensus 667 ~~k~k~~~~~~~~~~lW~~~~~p~~~-~~y~~t~fai~LNel~~~~~~~l~pTDSR~RpD~raLe~Gd~d~A~~eK~rLE 745 (805)
.. ..++..++|++++.+... .+|+||.||++||++++++.+.++|||||+|||++||++||+++|+++|.+||
T Consensus 237 ~~------~~~~~~~lw~~~~~~~~~~~~~~ft~fa~~LNe~~~~~~~~~~ptDSr~R~d~~al~~gd~~~A~~eK~~lE 310 (354)
T PF01237_consen 237 DS------DTGESKLLWDANPLPPNPKKYYGFTQFAIPLNELTPELEEKLPPTDSRWRPDQRALENGDIDKAQEEKKRLE 310 (354)
T ss_dssp ---------GGGEEEEEETTTS-SS--B----------G-------G-GS-TTBHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred cc------cCCCceEEEECCCCcccccceecccccccccccccccccccCCchhccchHHHHHHHcCCHHHHHHHHHHHH
Confidence 11 123678999999877654 57999999999999999888899999999999999999999999999999999
Q ss_pred HHHHHHHHhcc---CCCccceeEEcCC----CCceEEcCCchh
Q 003664 746 QRQRQARKMQE---NGWKPRWFAKDRA----TGTYRYIGGYWE 781 (805)
Q Consensus 746 e~QR~~Rk~re---~~~~P~~F~~~~~----~~~~~y~g~YWe 781 (805)
|+||++||+|+ ..|+||||+++.+ ...|+|+||||+
T Consensus 311 e~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~w~~~g~YW~ 353 (354)
T PF01237_consen 311 EKQRADRKERKEKGEEWKPRWFEKVEDPSTEEEEWVYKGGYWE 353 (354)
T ss_dssp HHHHHHHHHHHHCT--GGGSSEEEEE-SSS--T----------
T ss_pred HHHHHHHHHHHHcCCCccCCeEEECCCCCCccccccccccccC
Confidence 99999988764 5799999998854 467999999998
No 4
>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-63 Score=541.60 Aligned_cols=330 Identities=25% Similarity=0.345 Sum_probs=280.3
Q ss_pred cccchhHHHHhh-hcCCCCCccccccccccCCChhHhhhhhccchHHHHHHHhcCCCCCHHHHHHHHHHHHhhhccccCC
Q 003664 425 EKGVSLWAMIKD-NIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEG 503 (805)
Q Consensus 425 ~~~~~lwsilK~-~iGkDLsrIslPv~~~EP~S~LQr~~e~~ey~~lLd~A~~~~~~~d~~eRm~~V~aF~vS~y~~~~~ 503 (805)
+.+..||.++++ .+|+|||+|+||+|++||+|+||++++.+.+++||-.|.. ..||++||+.|++|++|+|+....
T Consensus 32 ~~~s~i~~L~sq~rpg~DLs~v~LPtfile~rs~Le~~~~~~~~~dll~~~~~---~~~p~~R~~~VvkwylS~~~~~~~ 108 (392)
T KOG2210|consen 32 EGKSIILDLLSQLRPGMDLSRVVLPTFILEPRSLLEKYTDFSYHPDLLLEASS---EADPLERMLAVVKWYLSGFHAGPK 108 (392)
T ss_pred hccceeecHhhhccCCCCcccccchhhhhhhHHHHHHhhhhhhccchhccccc---CCCHHHHhhhheeeeehhcccccc
Confidence 334557888887 9999999999999999999999999888888888866654 589999999999999999998877
Q ss_pred CcCCCCCCCCCCeEEEEeC-----C-CCEEEEEEecccCCccceeEEec--CcEEEEEEeeeeEEEEEeEEEEEeeeEEE
Q 003664 504 RICKPFNPLLGETYEADYP-----D-KGLQFFSEKVSHHPMIVACHCQG--TGWKFWGDSNLKSKFWGRSIQLDPVGVLT 575 (805)
Q Consensus 504 r~~KPfNPiLGETfe~~~~-----d-~g~rfiaEQVSHHPPisA~~~e~--~g~~~~g~~~~kskF~G~Si~v~~~G~~~ 575 (805)
...|||||||||||.|.|. + ..+.|+||||||||||||||+++ +|+++.|++.+|+||.|+||.|.+.|..+
T Consensus 109 ~~~~PyNPILGEtF~~~w~~~~~p~~~~~~~iAEQVSHHPPvSAf~~~~~~~~i~v~g~v~~kSkF~G~s~~V~~~G~~~ 188 (392)
T KOG2210|consen 109 GRKKPYNPILGETFTCHWKYPPHPSKGDTVFVAEQVSHHPPVSAFYVTCPKKGIQVDGHVWAKSKFLGNSIAVAMIGKGV 188 (392)
T ss_pred cccCCCCccchhhcccccccCCCCCCceEEEEeecccCCCCcceeeEEccccCeEEEEEEeecccccccceeEEEcCCcE
Confidence 7788999999999999982 2 34899999999999999999976 59999999999999999999999999999
Q ss_pred EEec-CCceEEecccceeeeeeccceeeEeeceeEEEEe-CCcceEEEEEeecccccCCCcEEEEEEEcCC-CcEEEEEE
Q 003664 576 LEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEG-NREYSCKLKFKEQSIIDRNPHQVHGIVQDRN-GKTVATLF 652 (805)
Q Consensus 576 l~f~-~gE~Y~~~~pt~~v~nii~G~~~~e~~G~~~I~~-~tg~~~~i~F~~k~~~~~~~~~V~G~V~d~~-g~~~~~i~ 652 (805)
|+|. .+|+|.++.|..++.|+++|.+|++++|+++|.| +++|.+.+.|+.++|+|+..+.+.|.|+... .+..+.|+
T Consensus 189 l~ll~~~E~Y~~t~P~~~~rg~~~~~p~velggkv~I~c~kt~~~a~~~~~~~~f~g~~~s~~~~~ik~~~~~~~~~~i~ 268 (392)
T KOG2210|consen 189 LKLLDHDETYLITFPNAYARGILLGAPWVELGGKVVIECPKTGLSAILESILKPFLGGKNSFNARSIKGPIDKKDFCSIS 268 (392)
T ss_pred EEEEecCcceeeccCCceeeeeeeccceEecCceEEEEcCCcceeeeEeeccCcccccccccceEEEEcccccccccccc
Confidence 9986 5999999999999999999999999999999999 5899999999999999999999999999644 44567899
Q ss_pred eeecceEEEEecccCCCCcccccCCccEEEEecCCCCCCCCccccccceeeccCCCccccCCCCCCCCCc--hhhhhHHH
Q 003664 653 GKWDESIHYVIGECSGKGKELESLSEACLLWKRSKPPKYPTRYNFTRFAITLNEVTPGLKEKLPPTDSRL--RPDQRCLE 730 (805)
Q Consensus 653 G~Wd~~l~~~~~~~~~k~k~~~~~~~~~~lW~~~~~p~~~~~y~~t~fai~LNel~~~~~~~l~pTDSR~--RpD~raLe 730 (805)
|+||+.|++++.+.. . .|...+... +.... ......+.|.|.+||+ +++++||.
T Consensus 269 G~W~~~~~~k~~~~~-----------~--~~~~~d~~~---------~~~~~--~~v~pLeEQ~e~ESrrlWk~Vt~ai~ 324 (392)
T KOG2210|consen 269 GEWDGVMYAKYAKSG-----------E--SRNFVDCKK---------LPVTK--PKVRPLEEQGEYESRRLWKEVTEAIL 324 (392)
T ss_pred eeecccEEEEEcCCC-----------c--eeecccccc---------cCcCC--CCcCChHHcCcHHHHHHHHHHHHHHH
Confidence 999999999765531 1 222211100 00000 0111235678999995 68999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHhcc---CCCccceeEEcCCCCceEEcCCchh
Q 003664 731 NGEYEMANSEKLRLEQRQRQARKMQE---NGWKPRWFAKDRATGTYRYIGGYWE 781 (805)
Q Consensus 731 ~Gd~d~A~~eK~rLEe~QR~~Rk~re---~~~~P~~F~~~~~~~~~~y~g~YWe 781 (805)
.||++.|+++|..|||+||++||.|+ ..|+||||..+++++.|.|...-|.
T Consensus 325 ~~d~~~Ate~K~~iEe~QR~~ak~ree~g~~W~pk~F~~~~~~~~~~~~~~~~~ 378 (392)
T KOG2210|consen 325 AGDIEQATEEKFELEEKQRELAKKREESGEEWKPKLFKVDEDGGDWDYRNYLPK 378 (392)
T ss_pred hccHHHHhHHHhHHHHHHHHHHHHHHHhCCcceecceeEcCCCCCccccccccC
Confidence 99999999999999999999988765 4699999999988888999876554
No 5
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.89 E-value=6.9e-23 Score=184.56 Aligned_cols=89 Identities=38% Similarity=0.694 Sum_probs=79.2
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCccc
Q 003664 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (805)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G 174 (805)
++|||.||+|++|+||+|||||++|.|+||+++.+. ...|+|
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~--------------------------------------~~~~~G 42 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEK--------------------------------------SHGCRG 42 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccC--------------------------------------cCCCcE
Confidence 479999999999999999999999999999986541 123789
Q ss_pred EEEcCccEEEecCCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHH
Q 003664 175 EVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 175 ~I~L~~ssi~~~~~d~~rF~I~t~~-kt~~LrAes~~dr~~WI~AL~~ 221 (805)
.|+|+.|.|.....+..+|.|.++. ++|+|+|+|++||++||+||+.
T Consensus 43 ~I~L~~~~i~~~~~~~~~F~i~~~~~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 43 SIFLKKAIIAAHEFDENRFDISVNENVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred EEECcccEEEcCCCCCCEEEEEeCCCeEEEEEeCCHHHHHHHHHHHhh
Confidence 9999999998877778899997766 9999999999999999999985
No 6
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.82 E-value=1.2e-20 Score=176.33 Aligned_cols=110 Identities=51% Similarity=0.866 Sum_probs=61.8
Q ss_pred eEEEEEeecCC-CCCceeeEEEEe-CCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 95 ISGVLYKWVNY-GKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 95 ~~G~L~K~~n~-~kgWk~RwFVL~-dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
++|||+||+|+ ++|||+|||||+ ||+|+|||+..+ ..+.+|+|+.+.+.+.+.++..+..+..
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~------ 65 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRD---------KKDVRIIGEESSRVIRKGDWSISRRSSR------ 65 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS----------------------TT-SB-SEEEE---GGGT------
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccc---------cccccccccchhceEeecccCccccccc------
Confidence 58999999998 999999999999 999999998443 3456777777666665544443332110
Q ss_pred ccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
...++.. . .....+.+.|.|+|++|+|||+|+|.+|+.+||+||++|
T Consensus 66 ~~~~~~~-~--~~~~~~~~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 66 IQGIKDK-N--PFGEIHLKVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp -EEEES--T----SS-SSEEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred ccccccC-C--cccCcCCCCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 0111111 0 112234677889999999999999999999999999986
No 7
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.82 E-value=4.5e-20 Score=167.56 Aligned_cols=89 Identities=30% Similarity=0.522 Sum_probs=77.3
Q ss_pred eEEEEEeecC--CCCCceeeEEEEe--CCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCC
Q 003664 95 ISGVLYKWVN--YGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (805)
Q Consensus 95 ~~G~L~K~~n--~~kgWk~RwFVL~--dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~ 170 (805)
++|||.|+++ ..|+||+|||||+ .+.|+||+.+.+ .
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d----------------------------------------~ 40 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQD----------------------------------------A 40 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCc----------------------------------------c
Confidence 4799999976 6899999999996 468999997543 2
Q ss_pred CcccEEEcCccEEEecCCC-CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 171 KPFGEVHLKVSSIRDSKSD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d-~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
+|+|.|+|..+++..+..+ ++.|.|.|++|+|+|+|+|++||++||+||+.++
T Consensus 41 ~p~G~I~L~~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~~~ 94 (95)
T cd01265 41 KPLGRVDLSGAAFTYDPREEKGRFEIHSNNEVIALKASSDKQMNYWLQALQSKR 94 (95)
T ss_pred cccceEECCccEEEcCCCCCCCEEEEEcCCcEEEEECCCHHHHHHHHHHHHhhc
Confidence 4899999999887766554 7899999999999999999999999999999875
No 8
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.78 E-value=1.4e-18 Score=160.15 Aligned_cols=90 Identities=28% Similarity=0.445 Sum_probs=74.3
Q ss_pred eEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 95 ISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 95 ~~G~L~K~~n~-~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
++|||.|++.. .++||+|||||+++.|+||+++.+ ..|.
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d----------------------------------------~~~~ 40 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLD----------------------------------------AFAK 40 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCC----------------------------------------cCcC
Confidence 48999999976 699999999999999999997553 1378
Q ss_pred cEEEcCcc----EEEec-----CCC-CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVS----SIRDS-----KSD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 174 G~I~L~~s----si~~~-----~~d-~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
|+|.|..+ +|... ..+ ...|.|.|++|+|+|.|+|++||.+||+||+.|..
T Consensus 41 G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 41 GEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred cEEEeeccccceeEeccCCccccccccceEEEEeCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 99999743 34332 111 23899999999999999999999999999999975
No 9
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.77 E-value=2.6e-18 Score=157.33 Aligned_cols=91 Identities=19% Similarity=0.335 Sum_probs=78.9
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
+.++|||.|++...+.|++|||||+++.|+|||++.+ ..|
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~----------------------------------------~~~ 41 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKD----------------------------------------PVE 41 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCC----------------------------------------ccE
Confidence 3578999999999999999999999999999997653 237
Q ss_pred ccEEEcCccEEEecCC------CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDSKS------DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~~------d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
.|.|.|..++|....+ .+..|.|.+++|+|+|+|+|.+|+++||+||++..
T Consensus 42 ~~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~~rt~~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 42 RGVINLSTARVEHSEDQAAMVKGPNTFAVCTKHRGYLFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred eeEEEecccEEEEccchhhhcCCCcEEEEECCCCEEEEEcCCHHHHHHHHHHhhhhh
Confidence 8999999887765543 25689999999999999999999999999998763
No 10
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.75 E-value=6.2e-18 Score=154.63 Aligned_cols=89 Identities=24% Similarity=0.389 Sum_probs=74.4
Q ss_pred eEEEEEeecC---CCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCC
Q 003664 95 ISGVLYKWVN---YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (805)
Q Consensus 95 ~~G~L~K~~n---~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~ 171 (805)
++|||.|.+. ++|.|++|||||+++.|+|||.+.. ..+
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~---------------------------------------~~~ 42 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSK---------------------------------------DDP 42 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCc---------------------------------------cCC
Confidence 6899999988 9999999999999999999997543 122
Q ss_pred cccEEEcCccEEEecCCC-------CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 172 PFGEVHLKVSSIRDSKSD-------DKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 172 p~G~I~L~~ssi~~~~~d-------~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
+.|+|+|..|.......+ ++.|.|.|++|+|+|+|+|++++++||++|+.|
T Consensus 43 ~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 43 DDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred CCceEEcccceEEeeccccccccccCcEEEEEcCCceEEEEeCCHHHHHHHHHHHHhh
Confidence 459999988764333221 368999999999999999999999999999976
No 11
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.73 E-value=1.5e-17 Score=153.99 Aligned_cols=91 Identities=24% Similarity=0.298 Sum_probs=73.0
Q ss_pred ceEEEEEeecCC-----CCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhccc
Q 003664 94 GISGVLYKWVNY-----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (805)
Q Consensus 94 ~~~G~L~K~~n~-----~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~ 168 (805)
+++|||+|++.- .++||+|||||+++.|+||+++.+.
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~-------------------------------------- 42 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEK-------------------------------------- 42 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCccc--------------------------------------
Confidence 468999999622 2489999999999999999975431
Q ss_pred CCCcccEEEcCccEEEecC----------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 169 NRKPFGEVHLKVSSIRDSK----------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~----------~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
...|+|+|+|..+.+.+.. .+...|.|.+++++|+|.|+|.+||++||+||+.+
T Consensus 43 ~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~t~~r~~yl~A~s~~er~~WI~ai~~~ 106 (106)
T cd01238 43 RGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVVHDEGTLYVFAPTEELRKRWIKALKQV 106 (106)
T ss_pred ccCcceeEECCcceEEEEecCCcCcccccccCccEEEEeCCCeEEEEcCCHHHHHHHHHHHHhC
Confidence 1248899999977654321 12567999999999999999999999999999864
No 12
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.73 E-value=2.2e-17 Score=150.37 Aligned_cols=88 Identities=30% Similarity=0.500 Sum_probs=72.1
Q ss_pred EEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 96 SGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 96 ~G~L~K~~n~~kgWk~RwFVL~--dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
+|||.|+++..+.||+|||||. ++.|+||+++.+ .+|+
T Consensus 2 ~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~----------------------------------------~~~~ 41 (101)
T cd01235 2 EGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFED----------------------------------------TAEK 41 (101)
T ss_pred eEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCC----------------------------------------Cccc
Confidence 7999999999999999999997 569999997543 2478
Q ss_pred cEEEcCccE-EEecC---------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSS-IRDSK---------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 174 G~I~L~~ss-i~~~~---------~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
|.|+|..++ |.... .....|.|.++.|+|+|+|+|.+|+++||.||++++
T Consensus 42 g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 42 GCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSKRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred eEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCCceEEEECCCHHHHHHHHHHHHhhC
Confidence 999998754 33211 123347788999999999999999999999999874
No 13
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.71 E-value=6.8e-17 Score=143.43 Aligned_cols=90 Identities=49% Similarity=0.881 Sum_probs=79.5
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCccc
Q 003664 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (805)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G 174 (805)
++|||+|+++..++|++|||||+++.|+||+++.+. ...|.|
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~--------------------------------------~~~~~~ 42 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSM--------------------------------------RGKPRG 42 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCccC--------------------------------------CCCceE
Confidence 589999999888999999999999999999986531 014789
Q ss_pred EEEcCccEEEecCCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003664 175 EVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 175 ~I~L~~ssi~~~~~d~~rF~I~t~~-kt~~LrAes~~dr~~WI~AL~~a 222 (805)
.|+|..+.+..+..++..|.|.++. ++|+|+|+|.+|+.+||.||+.|
T Consensus 43 ~i~l~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 43 TILLSGAVISEDDSDDKCFTIDTGGDKTLHLRANSEEERQRWVDALELA 91 (91)
T ss_pred EEEeceEEEEECCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHhC
Confidence 9999999988777668899999887 99999999999999999999875
No 14
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.70 E-value=6.4e-17 Score=146.53 Aligned_cols=88 Identities=28% Similarity=0.468 Sum_probs=74.0
Q ss_pred eEEEEEeecCCCC----CceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCC
Q 003664 95 ISGVLYKWVNYGK----GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (805)
Q Consensus 95 ~~G~L~K~~n~~k----gWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~ 170 (805)
++|||+|++..++ .|++|||||.++.|+||+.+.+ .
T Consensus 2 ~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~----------------------------------------~ 41 (96)
T cd01260 2 CDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQD----------------------------------------E 41 (96)
T ss_pred ceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCC----------------------------------------C
Confidence 5899999976544 8999999999999999997653 2
Q ss_pred CcccEEEcCccEEEecCCC--CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003664 171 KPFGEVHLKVSSIRDSKSD--DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d--~~rF~I~t~~-kt~~LrAes~~dr~~WI~AL~~a 222 (805)
.|.|.|.|..++|....+. ...|.|.++. ++|+|+|+|.+|+++||.||++|
T Consensus 42 ~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 42 KAEGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred ccceEEEccCCEEEEchhcCCceEEEECCCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 3679999999887654222 5578898888 99999999999999999999875
No 15
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.70 E-value=4.2e-17 Score=145.35 Aligned_cols=86 Identities=36% Similarity=0.621 Sum_probs=76.0
Q ss_pred EEEEee-cCCCCCceeeEEEE--eCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 97 GVLYKW-VNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 97 G~L~K~-~n~~kgWk~RwFVL--~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
|||.|+ .+..+||++||||| ++|+|+||+++.+ .+.+
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~----------------------------------------~~~r 40 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNS----------------------------------------GKLR 40 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCC----------------------------------------CeeE
Confidence 788776 79999999999999 9999999997543 1368
Q ss_pred cEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 174 G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
|.|+|..|.|..+. +.++|.|.+++.+|||+|.|.+|.+.||.||+.|+
T Consensus 41 Gsi~v~~a~is~~~-~~~~I~idsg~~i~hLKa~s~~~f~~Wv~aL~~a~ 89 (89)
T PF15409_consen 41 GSIDVSLAVISANK-KSRRIDIDSGDEIWHLKAKSQEDFQRWVSALQKAK 89 (89)
T ss_pred eEEEccceEEEecC-CCCEEEEEcCCeEEEEEcCCHHHHHHHHHHHHhcC
Confidence 99999999887664 57899999999999999999999999999999874
No 16
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.68 E-value=1.8e-16 Score=146.14 Aligned_cols=87 Identities=26% Similarity=0.449 Sum_probs=70.2
Q ss_pred EEEEEeec---------CCCCCceeeEEEEe-CCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchh
Q 003664 96 SGVLYKWV---------NYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (805)
Q Consensus 96 ~G~L~K~~---------n~~kgWk~RwFVL~-dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~ 165 (805)
+|||.|.. ...|+||+|||||. +|.|+||+.+..
T Consensus 2 ~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~------------------------------------ 45 (104)
T cd01236 2 CGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMP------------------------------------ 45 (104)
T ss_pred cceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCC------------------------------------
Confidence 69999973 24799999999996 688888875432
Q ss_pred cccCCCcccEEEcCccEEEecCCC----CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003664 166 RLLNRKPFGEVHLKVSSIRDSKSD----DKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 166 ~~~~~~p~G~I~L~~ssi~~~~~d----~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~ 221 (805)
..+|+|+|+|..|.......+ ...|.|.|++|+|+|.|+|++|+++||++|..
T Consensus 46 ---~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~tp~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 46 ---TTLPQGTIDMNQCTDVVDAEARTGQKFSICILTPDKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred ---CcccceEEEccceEEEeecccccCCccEEEEECCCceEEEEeCCHHHHHHHHHHHHh
Confidence 125889999988876544322 35799999999999999999999999999974
No 17
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.66 E-value=8.6e-16 Score=146.17 Aligned_cols=92 Identities=26% Similarity=0.482 Sum_probs=77.2
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCccc
Q 003664 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (805)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G 174 (805)
++|||+|+++..++|++|||||.++.|+||+++.+ ..|.|
T Consensus 2 k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~----------------------------------------~~~~g 41 (125)
T cd01252 2 REGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------------KEPRG 41 (125)
T ss_pred cEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCCC----------------------------------------CCceE
Confidence 58999999999999999999999999999996543 23789
Q ss_pred EEEcCccEEEecCC--CCCcEEEEeCC---------------------eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003664 175 EVHLKVSSIRDSKS--DDKRFSIFTGT---------------------KRLHLRAETREDRFAWMEALQAVKDMF 226 (805)
Q Consensus 175 ~I~L~~ssi~~~~~--d~~rF~I~t~~---------------------kt~~LrAes~~dr~~WI~AL~~a~~~~ 226 (805)
.|+|..+.|..... ....|.|.+++ ++|+|+|+|.+|+++||+||+.+...-
T Consensus 42 ~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~~ 116 (125)
T cd01252 42 IIPLENVSIREVEDPSKPFCFELFSPSDKQQIKACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISPN 116 (125)
T ss_pred EEECCCcEEEEcccCCCCeeEEEECCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 99999888776533 35568777654 579999999999999999999998753
No 18
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.65 E-value=1.1e-15 Score=140.40 Aligned_cols=90 Identities=23% Similarity=0.317 Sum_probs=72.6
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCC------eEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhc
Q 003664 93 NGISGVLYKWVNYGKGWRPRWFVLQDG------VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (805)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~dg------~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~ 166 (805)
+.++|||.|+ |.||+|||||+.+ .|.||+++..-.
T Consensus 2 v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~----------------------------------- 42 (101)
T cd01257 2 VRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFL----------------------------------- 42 (101)
T ss_pred ccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhcc-----------------------------------
Confidence 4689999997 8899999999877 899999754300
Q ss_pred ccCCCcccEEEcCccEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003664 167 LLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~~~~d---~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~ 221 (805)
.+...|+|+|+|..|.......+ ...|.|.|++++|+|.|+|++|+++||++|..
T Consensus 43 ~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 43 QKGSAPKRVIPLESCFNINKRADAKHRHLIALYTRDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred ccCCCceEEEEccceEEEeeccccccCeEEEEEeCCceEEEEeCCHHHHHHHHHHHhh
Confidence 11245899999999875443333 45788999999999999999999999999964
No 19
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.64 E-value=9.4e-16 Score=142.36 Aligned_cols=88 Identities=30% Similarity=0.380 Sum_probs=70.5
Q ss_pred eEEEEEeecCCCC----CceeeEEEEeCCe-------EEEEeecCCCccccchhhhccccccccchhhhhhhcccccccc
Q 003664 95 ISGVLYKWVNYGK----GWRPRWFVLQDGV-------LSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (805)
Q Consensus 95 ~~G~L~K~~n~~k----gWk~RwFVL~dg~-------LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~ 163 (805)
.+|||.|++...+ .||+|||||+++. |+||+++.+
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~---------------------------------- 46 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRK---------------------------------- 46 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCC----------------------------------
Confidence 3799999988544 9999999998765 699996543
Q ss_pred hhcccCCCcccEEEcCccEEEecC----CCC----CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 164 SQRLLNRKPFGEVHLKVSSIRDSK----SDD----KRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 164 ~~~~~~~~p~G~I~L~~ssi~~~~----~d~----~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
.+|.|.|.|..+.+.... ..+ ..|.|.++.|+|+|.|+|++|+++||.||+.+
T Consensus 47 ------~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 47 ------FKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDIETIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred ------CccceEEECCccEEEcccccccccCcccceEEEEEeCCccEEEEECCHHHHHHHHHHHHhh
Confidence 358899999987754331 112 23889999999999999999999999999753
No 20
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.62 E-value=2.7e-15 Score=133.95 Aligned_cols=90 Identities=30% Similarity=0.585 Sum_probs=74.3
Q ss_pred eEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 95 ISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 95 ~~G~L~K~~n~-~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
++|||.|++.. .++|++|||||.++.|+||+.+... ...+.
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~--------------------------------------~~~~~ 42 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDY--------------------------------------DNAHV 42 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCccc--------------------------------------ccccc
Confidence 48999999855 7899999999999999999975431 11356
Q ss_pred cEEEcCccEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
|.|+|..++|...... ...|.|.+++++|+|+|+|.+|++.||.||+.+
T Consensus 43 ~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~f~a~s~~~~~~Wi~al~~~ 94 (94)
T cd01250 43 KEIDLRRCTVRHNGKQPDRRFCFEVISPTKTWHFQADSEEERDDWISAIQES 94 (94)
T ss_pred eEEeccceEEecCccccCCceEEEEEcCCcEEEEECCCHHHHHHHHHHHhcC
Confidence 8999998877655443 567999999999999999999999999999863
No 21
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.59 E-value=6.2e-15 Score=135.63 Aligned_cols=93 Identities=28% Similarity=0.435 Sum_probs=67.0
Q ss_pred ceEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 94 GISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~-dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
.++|||.|+++..+.||+|||||+ ++.|.||+.+..+. .....|
T Consensus 2 ~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~~-----------------------------------~~~~i~ 46 (102)
T cd01241 2 VKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPEDG-----------------------------------DPFLPP 46 (102)
T ss_pred cEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCCcc-----------------------------------Cccccc
Confidence 589999999999999999999998 89999999754311 000113
Q ss_pred ccEEEcCccEEEe-cCCCCCcEEEE------eCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRD-SKSDDKRFSIF------TGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 173 ~G~I~L~~ssi~~-~~~d~~rF~I~------t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
.+.+.|..|++.. .......|.|. +..|+| .|+|.+||++||+||+.|+
T Consensus 47 l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~r~f--~a~s~ee~~eWi~ai~~v~ 102 (102)
T cd01241 47 LNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIERTF--HVESPEEREEWIHAIQTVA 102 (102)
T ss_pred cCCeEEeeeeeeeccCCCcceEEEEeccCCcccCEEE--EeCCHHHHHHHHHHHHhhC
Confidence 4455555555532 23335689987 234555 5999999999999999873
No 22
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.53 E-value=2.1e-14 Score=130.98 Aligned_cols=85 Identities=25% Similarity=0.316 Sum_probs=73.2
Q ss_pred EEEEEeecCC-CCCceeeEEEEeC----CeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCC
Q 003664 96 SGVLYKWVNY-GKGWRPRWFVLQD----GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (805)
Q Consensus 96 ~G~L~K~~n~-~kgWk~RwFVL~d----g~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~ 170 (805)
.|||.|++.. .|.||+|||+|.+ +.|+||+.+.+ .
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~----------------------------------------~ 41 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKK----------------------------------------T 41 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCC----------------------------------------C
Confidence 5999999887 9999999999975 99999997654 2
Q ss_pred CcccEEEcCccEEEecCCC----CCcEEEEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 003664 171 KPFGEVHLKVSSIRDSKSD----DKRFSIFTGTK--RLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d----~~rF~I~t~~k--t~~LrAes~~dr~~WI~AL~~ 221 (805)
+|+|.|+|..+.|+...+. +..|.|.++.+ +|+++|++ +||++||++|+.
T Consensus 42 ~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 42 KPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERALPTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred CccceeeccccEEEEccccccCCCeEEEEecCCCCeEEEEeCCH-HHHHHHHHHHhc
Confidence 4889999999988874332 57899999886 89999999 999999999985
No 23
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.52 E-value=1.3e-13 Score=123.01 Aligned_cols=93 Identities=32% Similarity=0.496 Sum_probs=79.4
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
+++|||.|++...++|++|||||.++.|+||+..... ....|.
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~-------------------------------------~~~~~~ 44 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDK-------------------------------------SDSKPK 44 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTT-------------------------------------TESSES
T ss_pred EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccc-------------------------------------cceeee
Confidence 5799999999999999999999999999999975520 123478
Q ss_pred cEEEcCccEEEecCC--------CCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSKS--------DDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 174 G~I~L~~ssi~~~~~--------d~~rF~I~t~~k-t~~LrAes~~dr~~WI~AL~~a~ 223 (805)
+.|+|..+.|..... ....|.|.++.+ +|+|+|+|.+++.+||++|+.|.
T Consensus 45 ~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 45 GSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEecCceEEEcCccccccccCCCcEEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 999999998876433 367799999876 99999999999999999999985
No 24
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.52 E-value=6.3e-14 Score=128.01 Aligned_cols=85 Identities=16% Similarity=0.166 Sum_probs=66.6
Q ss_pred EEEEeec----CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 97 GVLYKWV----NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 97 G~L~K~~----n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
|.|.|+. ...+.||+|||+|.++.|+||+.+. ..|
T Consensus 5 ~~~~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y~k~~~-----------------------------------------~~~ 43 (98)
T cd01244 5 LQQVDRSRLAWKKVLHFKKRYFQLTTTHLSWAKDVQ-----------------------------------------CKK 43 (98)
T ss_pred cEEEEcccCCCccCcCCceeEEEECCCEEEEECCCC-----------------------------------------Cce
Confidence 4556653 2347899999999999999999543 247
Q ss_pred ccEEEcCccEEEec-CC----CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDS-KS----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 173 ~G~I~L~~ssi~~~-~~----d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
.|+|+|......+. .+ ....|.|.++.++|+|+|+|.+||++||.||+.+
T Consensus 44 ~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi~al~k~ 98 (98)
T cd01244 44 SALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWLNALEKQ 98 (98)
T ss_pred eeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHHHHHhcC
Confidence 89999986554332 11 1357999999999999999999999999999864
No 25
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.45 E-value=6.2e-13 Score=122.19 Aligned_cols=96 Identities=16% Similarity=0.195 Sum_probs=79.7
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
+++|+|.|.+...++||+|||.|-+++|.|++.+... .....+++
T Consensus 3 ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~-----------------------------------~~~~y~~~ 47 (101)
T cd01219 3 LKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMI-----------------------------------GGSKFKVR 47 (101)
T ss_pred ccceEEEEEecCCCCceeEEEEEeCCEEEEEEccccc-----------------------------------CCCcEEEE
Confidence 5799999999999999999999977799999954210 01123578
Q ss_pred cEEEcCccEEEecCC--CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSKS--DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 174 G~I~L~~ssi~~~~~--d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
+.|+|....|....+ .++.|.|.+..|+|+|.|+|++|+.+||+||+.|++
T Consensus 48 ~~i~l~~~~v~~~~~~~~~~~F~I~~~~rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 48 ARIDVSGMQVCEGDNLERPHSFLVSGKQRCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EEEecccEEEEeCCCCCcCceEEEecCCcEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 999999988876532 378899999999999999999999999999999975
No 26
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.36 E-value=2.2e-12 Score=118.36 Aligned_cols=80 Identities=26% Similarity=0.559 Sum_probs=63.7
Q ss_pred CCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcccEEEcCccEEEe
Q 003664 106 GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD 185 (805)
Q Consensus 106 ~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~ 185 (805)
.|+||+|||+|+|+.|+|||++.+. ...|.+.|+|.+|.|..
T Consensus 17 ~K~~KrrwF~lk~~~L~YyK~kee~--------------------------------------~~~p~i~lnl~gcev~~ 58 (106)
T cd01237 17 LKGYKQYWFTFRDTSISYYKSKEDS--------------------------------------NGAPIGQLNLKGCEVTP 58 (106)
T ss_pred hhhheeEEEEEeCCEEEEEccchhc--------------------------------------CCCCeEEEecCceEEcc
Confidence 6789999999999999999986541 12367888999999876
Q ss_pred cCCC-CCcEE--EEeCC----eEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 186 SKSD-DKRFS--IFTGT----KRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 186 ~~~d-~~rF~--I~t~~----kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
+..- ..+|. +.++. ++|+|+|+|+++++.||.|++.|.
T Consensus 59 dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~Wmaa~rlas 103 (106)
T cd01237 59 DVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYAKWMAACRLAS 103 (106)
T ss_pred cccccccceEEEEecCCccCCeEEEEECCCHHHHHHHHHHHHHhh
Confidence 6411 33455 45555 999999999999999999999874
No 27
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.35 E-value=3.7e-12 Score=120.66 Aligned_cols=91 Identities=22% Similarity=0.444 Sum_probs=69.9
Q ss_pred eEEEEEe-e-cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 95 ISGVLYK-W-VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 95 ~~G~L~K-~-~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
-.|||.- + ++..|.|++|||||+++.|+||+.+.+. ....|
T Consensus 3 ~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~-------------------------------------~~~~P 45 (122)
T cd01263 3 YHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDE-------------------------------------KRKGP 45 (122)
T ss_pred cceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCcc-------------------------------------ccCCc
Confidence 4799984 3 6788999999999999999999976541 12358
Q ss_pred ccEEEcCccEEEec-------CCCCCcEEEEe--CC-----------------eE-EEEEcCCHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDS-------KSDDKRFSIFT--GT-----------------KR-LHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 173 ~G~I~L~~ssi~~~-------~~d~~rF~I~t--~~-----------------kt-~~LrAes~~dr~~WI~AL~~a 222 (805)
.|.|.|..|.+... ....+.|.|.+ ++ ++ +.|.|+|.+||+.||.||+.|
T Consensus 46 lg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 46 TGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPKMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred eEEEEhhhCcccccccCChhhcCCCCeEEEEEecccccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 99999999886543 22356687743 22 44 568999999999999999864
No 28
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.33 E-value=4.4e-12 Score=131.71 Aligned_cols=98 Identities=27% Similarity=0.496 Sum_probs=80.6
Q ss_pred CCcceEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccC
Q 003664 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (805)
Q Consensus 91 ~~~~~~G~L~K~~-n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~ 169 (805)
-.+..+|||.|.+ |-.+.||+|||+|.|++|+||.--.+
T Consensus 258 fnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTD---------------------------------------- 297 (395)
T KOG0930|consen 258 FNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTD---------------------------------------- 297 (395)
T ss_pred cCccccceeeeecCCcccchhheeEEeecceeeeeeeccC----------------------------------------
Confidence 3688999999996 58899999999999999999995443
Q ss_pred CCcccEEEcCccEEEecCCC--CCcEEEEeCC----------------------eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 170 RKPFGEVHLKVSSIRDSKSD--DKRFSIFTGT----------------------KRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~d--~~rF~I~t~~----------------------kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
..|+|.|.|..-+|++.... +.+|.|+.+. ..|.++|.+.+|+..||++|++++..
T Consensus 298 KEPrGIIpLeNlsir~VedP~kP~cfEly~ps~~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~ 377 (395)
T KOG0930|consen 298 KEPRGIIPLENLSIREVEDPKKPNCFELYIPSNKGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISR 377 (395)
T ss_pred CCCCcceeccccceeeccCCCCCCeEEEecCCCCcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhcc
Confidence 34899999999888865433 6677776532 36999999999999999999999886
Q ss_pred ccc
Q 003664 226 FPR 228 (805)
Q Consensus 226 ~~~ 228 (805)
-|-
T Consensus 378 ~Pf 380 (395)
T KOG0930|consen 378 DPF 380 (395)
T ss_pred CcH
Confidence 543
No 29
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.30 E-value=3e-11 Score=105.88 Aligned_cols=93 Identities=33% Similarity=0.556 Sum_probs=77.8
Q ss_pred ceEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 94 GISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 94 ~~~G~L~K~~n-~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
.++|||.++.. ....|++|||+|.++.|.||+...... ...+
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~-------------------------------------~~~~ 44 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKK-------------------------------------DYKP 44 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccc-------------------------------------cCCC
Confidence 57999999987 678899999999999999999754310 1236
Q ss_pred ccEEEcCccEEEecCC-----CCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDSKS-----DDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~~-----d~~rF~I~t~~k-t~~LrAes~~dr~~WI~AL~~a~ 223 (805)
.+.|+|..+.+..... ....|.|.++++ +|+|+|+|++|+..|+.+|+.+.
T Consensus 45 ~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 45 KGSIDLSGITVREAPDPDSAKKPHCFEIKTADRRSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred ceEEECCcCEEEeCCCCccCCCceEEEEEecCCceEEEEcCCHHHHHHHHHHHHHhh
Confidence 7999999988876654 367899998888 99999999999999999999875
No 30
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.28 E-value=1.4e-11 Score=116.90 Aligned_cols=75 Identities=16% Similarity=0.467 Sum_probs=57.7
Q ss_pred CceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcccEEEcCcc-EEEec
Q 003664 108 GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVS-SIRDS 186 (805)
Q Consensus 108 gWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~s-si~~~ 186 (805)
.|++|||||+++.|.||++..+. +|+|+|.|... .|...
T Consensus 32 ~w~kRWFvlr~s~L~Y~~~~~~~----------------------------------------~~~~vil~D~~f~v~~~ 71 (121)
T cd01254 32 RWQKRWFIVKESFLAYMDDPSSA----------------------------------------QILDVILFDVDFKVNGG 71 (121)
T ss_pred CCcceeEEEeCCEEEEEcCCCCC----------------------------------------ceeeEEEEcCCccEEeC
Confidence 59999999999999999975431 25566666432 22221
Q ss_pred C--------------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 187 K--------------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 187 ~--------------~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
. .....|.|.|++|+|.|.|+|..++++||++|+.|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 72 GKEDISLAVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred CcccccccccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 1 22457899999999999999999999999999875
No 31
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.18 E-value=1.3e-10 Score=106.89 Aligned_cols=90 Identities=21% Similarity=0.321 Sum_probs=65.3
Q ss_pred eEEEEE-eec-------CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhc
Q 003664 95 ISGVLY-KWV-------NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (805)
Q Consensus 95 ~~G~L~-K~~-------n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~ 166 (805)
++|+|. |.. ...+.|++|||||.++.|+||+.+....
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~----------------------------------- 45 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAA----------------------------------- 45 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccc-----------------------------------
Confidence 478887 332 1456899999999999999999754310
Q ss_pred ccCCCccc--EEEcCccEEEecCC---CCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 167 LLNRKPFG--EVHLKVSSIRDSKS---DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 167 ~~~~~p~G--~I~L~~ssi~~~~~---d~~rF~I~t-~~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
..+.| .|+|..+.|....+ .+..|.|.+ ++++|.|+|+|.++++.||.||+++
T Consensus 46 ---~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~aL~~~ 104 (104)
T cd01253 46 ---ENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRLPDGAEFLFQAPDEEEMSSWVRALKSA 104 (104)
T ss_pred ---cCCCCCCcEeccCCEEEecCCcccCceEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 00123 67777666654432 256788865 4589999999999999999999864
No 32
>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]
Probab=99.17 E-value=6e-11 Score=130.91 Aligned_cols=94 Identities=35% Similarity=0.587 Sum_probs=85.4
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
..+.|+|.||+||+.||+.|||||.+|.|+||++...+ .++ +
T Consensus 24 ~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E~------------------------------------~hG--c 65 (611)
T KOG1739|consen 24 VERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDET------------------------------------EHG--C 65 (611)
T ss_pred hhhcceeeeeecccccccceEEEEcccchhhhhhhhhh------------------------------------hcc--c
Confidence 45789999999999999999999999999999986431 122 5
Q ss_pred ccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
||.|.|+.+.|..+..|.++|.|.++...++|+|.+..+++.|+++|+--+.
T Consensus 66 Rgsi~l~ka~i~ahEfDe~rfdIsvn~nv~~lra~~~~hr~~w~d~L~wmk~ 117 (611)
T KOG1739|consen 66 RGSICLSKAVITAHEFDECRFDISVNDNVWYLRAQDPDHRQQWIDALEWMKT 117 (611)
T ss_pred ceeeEeccCCcccccchhheeeeEeccceeeehhcCcHHHHHHHHHHHHHhh
Confidence 7999999999999999999999999999999999999999999999998877
No 33
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.15 E-value=3.1e-10 Score=104.05 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=69.8
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
+++|+|.|.... +.|+|+||.+.|-.|++.+..++. ..-+++
T Consensus 3 ikEG~L~K~~~k-~~~~R~~FLFnD~LlY~~~~~~~~-------------------------------------~~y~~~ 44 (99)
T cd01220 3 IRQGCLLKLSKK-GLQQRMFFLFSDLLLYTSKSPTDQ-------------------------------------NSFRIL 44 (99)
T ss_pred eeEEEEEEEeCC-CCceEEEEEccceEEEEEeecCCC-------------------------------------ceEEEE
Confidence 579999998753 356666666677555554432210 012368
Q ss_pred cEEEcCccEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
|.|+|....|.....+ .+.|.|.++.|+|.|.|.|++|+.+||++|+.|++
T Consensus 45 ~~i~L~~~~V~~~~~~~~~~~~F~I~~~~ks~~l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 45 GHLPLRGMLTEESEHEWGVPHCFTIFGGQCAITVAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred EEEEcCceEEeeccCCcCCceeEEEEcCCeEEEEECCCHHHHHHHHHHHHHHhh
Confidence 9999999988765442 57899999999999999999999999999999975
No 34
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.13 E-value=2.8e-10 Score=98.81 Aligned_cols=91 Identities=38% Similarity=0.644 Sum_probs=75.0
Q ss_pred eEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 95 ISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 95 ~~G~L~K~~n~~-kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
++|||.++.... ..|++|||+|.++.|.||+...... ...+.
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~-------------------------------------~~~~~ 43 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKK-------------------------------------SYKPK 43 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCc-------------------------------------CCCCc
Confidence 379999987665 7899999999999999999644310 13478
Q ss_pred cEEEcCccEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~rF~I~t~~-kt~~LrAes~~dr~~WI~AL~~a 222 (805)
+.|.|..+.|...... ...|.|.+.. +.|+|+|+|.+|+..|+.+|+.+
T Consensus 44 ~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 44 GSIPLSGAEVEESPDDSGRKNCFEIRTPDGRSYLLQAESEEEREEWIEALQSA 96 (96)
T ss_pred ceEEcCCCEEEECCCcCCCCcEEEEecCCCcEEEEEeCCHHHHHHHHHHHhcC
Confidence 9999999888776553 6789998877 99999999999999999999864
No 35
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=99.02 E-value=1e-10 Score=136.73 Aligned_cols=93 Identities=30% Similarity=0.456 Sum_probs=75.7
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEE--eCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhccc
Q 003664 91 VGNGISGVLYKWVNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (805)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL--~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~ 168 (805)
.+.+-+|||||+|...|+|++||||| ....|+||....+
T Consensus 1632 eNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~ed--------------------------------------- 1672 (1732)
T KOG1090|consen 1632 ENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFED--------------------------------------- 1672 (1732)
T ss_pred cccCcccchhhcchhhcccccceeEecCCccceeeeccccc---------------------------------------
Confidence 44455999999999999999999999 5799999996543
Q ss_pred CCCcccEEEcCc-cEEEe---cCCCCCc-EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 169 NRKPFGEVHLKV-SSIRD---SKSDDKR-FSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 169 ~~~p~G~I~L~~-ssi~~---~~~d~~r-F~I~t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
.+|+|+|+|.. -++.. ...|.+. |.+.|..|+|.|+|.+.-..++|++.||+|.
T Consensus 1673 -t~pkG~IdLaevesv~~~~~k~vdekgffdlktt~rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1673 -TKPKGCIDLAEVESVALIGPKTVDEKGFFDLKTTNRVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred -ccccchhhhhhhhhhcccCccccCccceeeeehhhHHHHHHhccchHHHHHHHHHHHhh
Confidence 35889999953 33332 3344444 6799999999999999999999999999985
No 36
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.01 E-value=2.4e-10 Score=122.04 Aligned_cols=101 Identities=26% Similarity=0.406 Sum_probs=76.9
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhccc
Q 003664 90 IVGNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (805)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL-~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~ 168 (805)
.+.+.++|||+|++.++|.||+|||+| .||.|.-|+.+..+. +.
T Consensus 12 ~~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~-----------------------------------~~ 56 (516)
T KOG0690|consen 12 QEDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEV-----------------------------------QP 56 (516)
T ss_pred hhhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccC-----------------------------------CC
Confidence 456788999999999999999999999 899999999875421 11
Q ss_pred CCCcccEEEcCccEE-EecCCCCCcEEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003664 169 NRKPFGEVHLKVSSI-RDSKSDDKRFSIFTG------TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (805)
Q Consensus 169 ~~~p~G~I~L~~ssi-~~~~~d~~rF~I~t~------~kt~~LrAes~~dr~~WI~AL~~a~~~~~ 227 (805)
...|.....++.|.+ ...+..++.|.|.+- .|||| ++|+++|++|++|||++....+
T Consensus 57 ~p~pLNnF~v~~cq~m~~erPrPntFiiRcLQWTTVIERTF~--ves~~eRq~W~~AIq~vsn~l~ 120 (516)
T KOG0690|consen 57 TPEPLNNFMVRDCQTMKTERPRPNTFIIRCLQWTTVIERTFY--VESAEERQEWIEAIQAVSNRLK 120 (516)
T ss_pred CcccccchhhhhhhhhhccCCCCceEEEEeeeeeeeeeeeee--cCCHHHHHHHHHHHHHHhhhhh
Confidence 123555555666553 445566888988763 46666 7999999999999999976543
No 37
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=98.97 E-value=5.7e-09 Score=91.22 Aligned_cols=87 Identities=31% Similarity=0.528 Sum_probs=70.2
Q ss_pred EEEEEeecCCC----CCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCC
Q 003664 96 SGVLYKWVNYG----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (805)
Q Consensus 96 ~G~L~K~~n~~----kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~ 171 (805)
+|||.+++... +.|++|||+|.++.|.||+.+....
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~~---------------------------------------- 41 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKKE---------------------------------------- 41 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCCc----------------------------------------
Confidence 69999987654 7899999999999999999754311
Q ss_pred cc-cEEEcCccEEEecCC---CCCcEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 172 PF-GEVHLKVSSIRDSKS---DDKRFSIFTG---TKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 172 p~-G~I~L~~ssi~~~~~---d~~rF~I~t~---~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
+. +.++|....+..... .+..|.|.+. .+.++|+|+|.+|++.||.||+.|
T Consensus 42 ~~~~~~~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 42 IKPGSIPLSEISVEEDPDGSDDPNCFAIVTKDRGRRVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred CCCCEEEccceEEEECCCCCCCCceEEEECCCCCcEEEEEEcCCHHHHHHHHHHHhcC
Confidence 12 677777766655543 3688999988 789999999999999999999864
No 38
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.93 E-value=8e-09 Score=97.52 Aligned_cols=100 Identities=13% Similarity=0.229 Sum_probs=71.9
Q ss_pred eEEEEEee---------cCC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccch
Q 003664 95 ISGVLYKW---------VNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (805)
Q Consensus 95 ~~G~L~K~---------~n~-~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~ 164 (805)
++|+|..+ +.. .+.|++||+||+++.|+.||++.......
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~------------------------------ 51 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSL------------------------------ 51 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCccccccc------------------------------
Confidence 46888653 111 35799999999999999999865311000
Q ss_pred hcccCCCcccEEEcCccEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003664 165 QRLLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (805)
Q Consensus 165 ~~~~~~~p~G~I~L~~ssi~~~~~d---~~rF~I~t~~-kt~~LrAes~~dr~~WI~AL~~a~~~~~ 227 (805)
........|.|..++.....+. +..|.|.+++ +.|.|+|.+.+|++.||.+|+.|.+.++
T Consensus 52 ---~~~~~~~~Isi~~a~~~ia~dy~Kr~~VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~~s 115 (117)
T cd01230 52 ---SETELKNAISIHHALATRASDYSKKPHVFRLRTADWREFLFQTSSLKELQSWIERINVVAAAFS 115 (117)
T ss_pred ---ccccccceEEeccceeEeeccccCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 0011345788887764433222 6678899875 8999999999999999999999998864
No 39
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.71 E-value=7.1e-08 Score=89.11 Aligned_cols=92 Identities=22% Similarity=0.178 Sum_probs=67.8
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCC-eEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhccc
Q 003664 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDG-VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (805)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~dg-~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~ 168 (805)
......+|++.|+.+++ +|+|||+|.|+ .|.|+.....
T Consensus 10 ge~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~~--------------------------------------- 48 (104)
T PF14593_consen 10 GELILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKKM--------------------------------------- 48 (104)
T ss_dssp T--EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTTT---------------------------------------
T ss_pred CCeEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCCC---------------------------------------
Confidence 45678899999998877 99999999887 8888885332
Q ss_pred CCCcccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003664 169 NRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (805)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~ 226 (805)
..+|+|++..+.-.+ ..+...|.|.|++|+|+|.. ...+...|++||+.++..+
T Consensus 49 --~~KGeI~~~~~l~v~-~k~~~~F~I~tp~RtY~l~d-~~~~A~~W~~~I~~~~~~~ 102 (104)
T PF14593_consen 49 --VLKGEIPWSKELSVE-VKSFKTFFIHTPKRTYYLED-PEGNAQQWVEAIEEVKKQY 102 (104)
T ss_dssp --EEEEEE--STT-EEE-ECSSSEEEEEETTEEEEEE--TTS-HHHHHHHHHHHHHHH
T ss_pred --eECcEEecCCceEEE-EccCCEEEEECCCcEEEEEC-CCCCHHHHHHHHHHHHHHh
Confidence 146999998653222 34467999999999999987 4566888999999998753
No 40
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.71 E-value=9.9e-08 Score=85.86 Aligned_cols=90 Identities=27% Similarity=0.359 Sum_probs=70.5
Q ss_pred cceEEEEEee-cCC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCC
Q 003664 93 NGISGVLYKW-VNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (805)
Q Consensus 93 ~~~~G~L~K~-~n~-~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~ 170 (805)
++..|||.-. ... .+|=|.|||||.+.+|+|||...+ .
T Consensus 1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~ee----------------------------------------K 40 (110)
T cd01256 1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEE----------------------------------------K 40 (110)
T ss_pred CeeeeeEEeeccceecCCCcceEEEEecceeeeeccccc----------------------------------------c
Confidence 3678999875 233 455899999999999999997543 2
Q ss_pred CcccEEEcCccEEEecCC----CCCcEEEEeCC--------eEEEEEcCCHHHHHHHHHHHHHH
Q 003664 171 KPFGEVHLKVSSIRDSKS----DDKRFSIFTGT--------KRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~----d~~rF~I~t~~--------kt~~LrAes~~dr~~WI~AL~~a 222 (805)
.|+|.|.|..-.++.... ....|.++.+. |++.|.|+|.+|...|...+-.|
T Consensus 41 E~kyilpLdnLk~Rdve~gf~sk~~~FeLfnpd~rnvykd~k~lel~~~~~e~vdswkasflra 104 (110)
T cd01256 41 EKKYMLPLDGLKLRDIEGGFMSRNHKFALFYPDGRNVYKDYKQLELGCETLEEVDSWKASFLRA 104 (110)
T ss_pred cccceeeccccEEEeecccccCCCcEEEEEcCcccccccchheeeecCCCHHHHHHHHHHHHhc
Confidence 378999999888876544 25667888653 78999999999999998877654
No 41
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.65 E-value=2.7e-07 Score=85.47 Aligned_cols=94 Identities=22% Similarity=0.206 Sum_probs=74.8
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
+.+|.|.|-. .|+-++|+|.|=+.+|.|-+.-.. .+..+..
T Consensus 5 i~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~~~-------------------------------------~~~~~~~ 45 (104)
T cd01218 5 VGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIVIS-------------------------------------KKKYNKQ 45 (104)
T ss_pred EecCcEEEee--cCCCceEEEEEecCEEEEEEeecC-------------------------------------CceeeEe
Confidence 5689999977 678899999997779999653100 0122356
Q ss_pred cEEEcCccEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003664 174 GEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (805)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~ 226 (805)
+.|+|....|....++ ++.|.|.++.|+|.+.|+|++|+.+||++|+.|++..
T Consensus 46 ~~i~L~~~~v~~~~d~~~~~n~f~I~~~~kSf~v~A~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 46 HILPLEGVQVESIEDDGIERNGWIIKTPTKSFAVYAATETEKREWMLHINKCVTDL 101 (104)
T ss_pred eEEEccceEEEecCCcccccceEEEecCCeEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 8899998877655442 5899999999999999999999999999999999763
No 42
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.45 E-value=7.1e-07 Score=82.09 Aligned_cols=47 Identities=34% Similarity=0.528 Sum_probs=41.4
Q ss_pred EEEcCccEEEecCCCCCcEE--EEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 003664 175 EVHLKVSSIRDSKSDDKRFS--IFTGTK--RLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 175 ~I~L~~ssi~~~~~d~~rF~--I~t~~k--t~~LrAes~~dr~~WI~AL~~ 221 (805)
.|.|+-|+++..++.++||+ |.+.++ ++.|+|+|+.++..||+|+..
T Consensus 53 ~~~l~sc~~r~~~~~dRRFCFei~~~~~~~~~~lQA~Se~~~~~Wi~A~dg 103 (104)
T cd01249 53 TLTLKSCSRRKTESIDKRFCFDVEVEEKPGVITMQALSEKDRRLWIEAMDG 103 (104)
T ss_pred EEeeeeccccccCCccceeeEeeeecCCCCeEEEEecCHHHHHHHHHhhcC
Confidence 47889999999998899977 777777 899999999999999999863
No 43
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=98.35 E-value=2.3e-06 Score=81.08 Aligned_cols=103 Identities=20% Similarity=0.321 Sum_probs=59.9
Q ss_pred eEEEEEeec-----C-----CCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccch
Q 003664 95 ISGVLYKWV-----N-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (805)
Q Consensus 95 ~~G~L~K~~-----n-----~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~ 164 (805)
++|||..+. + ..++|+.-|.||++++|+.||.+...... .....
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~--------------------------~~~~~ 55 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASS--------------------------TPPDI 55 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT---------------------------BS--
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccC--------------------------Ccccc
Confidence 589998641 1 23569999999999999999974310000 00000
Q ss_pred hcccCCCcccEEEcCccEEEecCC---CCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 165 QRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 165 ~~~~~~~p~G~I~L~~ssi~~~~~---d~~rF~I~t~-~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
......+|.+.|.|..|......+ .++.|.+.++ +..|.|+|.|.+|+.+||.+|+.+.
T Consensus 56 ~~~~~~~p~~~i~L~~a~a~~a~dY~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 56 QSVENAKPDSSISLHHALAEIASDYTKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp -SS--E-----EE-TT-EEEEETTBTTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred cccccCcceeEEEecceEEEeCcccccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence 001233577889999877655322 2566899987 5789999999999999999999875
No 44
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.28 E-value=2.9e-07 Score=111.27 Aligned_cols=97 Identities=32% Similarity=0.493 Sum_probs=79.1
Q ss_pred CcceEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCC
Q 003664 92 GNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (805)
Q Consensus 92 ~~~~~G~L~K~~-n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~ 170 (805)
+..+.|||+|++ +..+.|.+|||-.+++.|.|+..-.. .
T Consensus 273 ~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~----------------------------------------~ 312 (785)
T KOG0521|consen 273 GYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGAD----------------------------------------A 312 (785)
T ss_pred hhhhhhhhhhhcccchhhHHhhhhhhhcccccccccccc----------------------------------------c
Confidence 456789999885 56899999999999999999884221 0
Q ss_pred CcccEEEcCccEEEecCCC-CCc--EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003664 171 KPFGEVHLKVSSIRDSKSD-DKR--FSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (805)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d-~~r--F~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~~~ 228 (805)
.....++|..|+|+..... ++| |.|++++|+|+|+|+|+.|+++||.+|+..+...-.
T Consensus 313 ~~~~~~dL~~csvk~~~~~~drr~CF~iiS~tks~~lQAes~~d~~~Wi~~i~nsi~s~l~ 373 (785)
T KOG0521|consen 313 ENVLIEDLRTCSVKPDAEQRDRRFCFEIISPTKSYLLQAESEKDCQDWISALQNSILSALN 373 (785)
T ss_pred cccccccchhccccCCcccccceeeEEEecCCcceEEecCchhHHHHHHHHHHHHHHHHHh
Confidence 0156788999999988775 554 569999999999999999999999999999876444
No 45
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.25 E-value=6.6e-06 Score=77.20 Aligned_cols=99 Identities=24% Similarity=0.273 Sum_probs=66.4
Q ss_pred CcceEEEEEe--ecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccC
Q 003664 92 GNGISGVLYK--WVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (805)
Q Consensus 92 ~~~~~G~L~K--~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~ 169 (805)
|+..+|||.- .++..+||+++|.||.+..|..|....+..-. + .
T Consensus 1 gt~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~--p--------------------------------~ 46 (122)
T cd01243 1 GTAYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQ--P--------------------------------S 46 (122)
T ss_pred CccceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCC--c--------------------------------c
Confidence 4567999964 45667899999999999999999976642100 0 0
Q ss_pred CCcccEEEcC--c---cE------EEecCCC-CCcEEEEe-------CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 170 RKPFGEVHLK--V---SS------IRDSKSD-DKRFSIFT-------GTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 170 ~~p~G~I~L~--~---ss------i~~~~~d-~~rF~I~t-------~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
..|.=.|+|. . ++ |..++.| ++-|.|.+ +..+.+|-|+|..|++.|+.||..-..
T Consensus 47 ~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l~~ 120 (122)
T cd01243 47 VVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSELHK 120 (122)
T ss_pred CceeEEEEcCCCCEEEEEecHHHccccCcccCCeEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHHHh
Confidence 0122223332 1 11 2233444 67787765 347899999999999999999987654
No 46
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.22 E-value=2.3e-06 Score=77.82 Aligned_cols=94 Identities=23% Similarity=0.411 Sum_probs=60.8
Q ss_pred eEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 95 ISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 95 ~~G~L~K~~n-~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
.+|||+|.+. ..|.||+|||||. ++ +-|..- |- ++ ..+...|.
T Consensus 4 ~sGyL~k~Gg~~~KkWKKRwFvL~-qv-sQYtfa------mc--------------------------sy--~ekks~P~ 47 (117)
T cd01234 4 HCGYLYAIGKNVWKKWKKRFFVLV-QV-SQYTFA------MC--------------------------SY--REKKAEPT 47 (117)
T ss_pred eeEEEEeccchhhhhhheeEEEEE-ch-hHHHHH------HH--------------------------hh--hhhcCCch
Confidence 6899999986 8999999999998 33 222210 00 00 01233466
Q ss_pred cEEEcCccEEEecCCCC--C---------c--EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSKSDD--K---------R--FSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 174 G~I~L~~ssi~~~~~d~--~---------r--F~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
-.|.|.+-+|.-....+ . + |..+-.+-+..|..+++.||.-||+||=.|..
T Consensus 48 e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~ff~avkegd~~~fa~~de~~r~lwvqa~yratg 111 (117)
T cd01234 48 EFIQLDGYTVDYMPESDPDPNSELSLQGGRHFFNAVKEGDELKFATDDENERHLWVQAMYRATG 111 (117)
T ss_pred hheeecceEEeccCCCCCCcccccccccchhhhheeccCcEEEEeccchHHHHHHHHHHHHHcC
Confidence 67777777765332221 1 1 33334456788999999999999999977643
No 47
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.19 E-value=1.2e-05 Score=74.53 Aligned_cols=91 Identities=20% Similarity=0.348 Sum_probs=63.9
Q ss_pred eEEEEEee--cCC--CCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCC
Q 003664 95 ISGVLYKW--VNY--GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (805)
Q Consensus 95 ~~G~L~K~--~n~--~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~ 170 (805)
++|||.-- ++. .+||+++|.||.+..|..|....+.. ..
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~-------------------------------------~~ 44 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKE-------------------------------------NS 44 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCcccc-------------------------------------CC
Confidence 68999754 344 36999999999999999999766521 00
Q ss_pred CcccEEEcC----------ccEEEecCCC-CCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHH
Q 003664 171 KPFGEVHLK----------VSSIRDSKSD-DKRFSIFTGT--KRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 171 ~p~G~I~L~----------~ssi~~~~~d-~~rF~I~t~~--kt~~LrAes~~dr~~WI~AL~~a 222 (805)
.|.-+++|. ...|..++.| ++-|.|..+. ++.+|-|++..|++.||.||..-
T Consensus 45 ~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I~~~~~~~~lllLA~s~~ek~kWV~~L~~~ 109 (112)
T cd01242 45 TPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQILYANEARDLLLLAPQTDEQNKWVSRLVKK 109 (112)
T ss_pred CcEEEEEccceeeeecccHHHeeecCcccCCeEEEEEeCCccceEEEEeCCchHHHHHHHHHHHh
Confidence 122233332 1223344455 7778887754 88999999999999999999754
No 48
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.03 E-value=4.8e-05 Score=71.46 Aligned_cols=102 Identities=20% Similarity=0.277 Sum_probs=73.7
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
+.+|-|.|-+...+.++.|+|-|=|++|-|-|...... ++.|.. ....+-+
T Consensus 5 I~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~~-----------~~~g~~------------------~~~y~~k 55 (112)
T cd01261 5 IMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQP-----------RLPGAS------------------SAEYRLK 55 (112)
T ss_pred cccCcEEEEecccCCcceEEEEEecCeEEEEEeccCcc-----------cccccc------------------cceEEEE
Confidence 57899999875457799999999999999999644210 111110 0012346
Q ss_pred cEEEcCccEEEecCCC---CCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSKSD---DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~rF~I~t~-~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
+.|.|....|....+. .+.|.|.+. ++.|.|+|.|++++.+||+||..++.
T Consensus 56 ~~~~l~~~~V~d~~d~~~~knaF~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 56 EKFFMRKVDINDKPDSSEYKNAFEIILKDGNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred EEEeeeeeEEEEcCCCcccCceEEEEcCCCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 7788877666533222 578999985 68899999999999999999998875
No 49
>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=97.92 E-value=1.3e-05 Score=95.38 Aligned_cols=97 Identities=21% Similarity=0.433 Sum_probs=73.4
Q ss_pred CcceEEEEEee--cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccC
Q 003664 92 GNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (805)
Q Consensus 92 ~~~~~G~L~K~--~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~ 169 (805)
.+.-.|+|+-. +.-++.|.|||++|++|++.|+|-..++ +.
T Consensus 989 dVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDE-------------------------------------kr 1031 (1116)
T KOG3640|consen 989 DVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDE-------------------------------------KR 1031 (1116)
T ss_pred ceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchh-------------------------------------cc
Confidence 35556999886 3444559999999999999999976552 24
Q ss_pred CCcccEEEcCccEEEe---cCCC----CCcEEEEeC-------------Ce-EEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 170 RKPFGEVHLKVSSIRD---SKSD----DKRFSIFTG-------------TK-RLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 170 ~~p~G~I~L~~ssi~~---~~~d----~~rF~I~t~-------------~k-t~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
..|.|.|+|..|+-.. ...| ++.|.|.+- -| +..|.|+|.++++.|+.+|+.+...
T Consensus 1032 K~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~ 1108 (1116)
T KOG3640|consen 1032 KVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVWRPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQ 1108 (1116)
T ss_pred cCcceeeehhhhhccccccchhhhccCCceeEEEeecccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHH
Confidence 4589999999887432 2222 567888741 13 5789999999999999999998654
No 50
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=97.84 E-value=8.5e-06 Score=93.95 Aligned_cols=96 Identities=18% Similarity=0.384 Sum_probs=80.7
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
-..+||+.|-+...|.|++||||++.|..+||+.+++. ..+|
T Consensus 249 ~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~--------------------------------------~~~p 290 (936)
T KOG0248|consen 249 MEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNR--------------------------------------DEEP 290 (936)
T ss_pred hhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCc--------------------------------------cccc
Confidence 45779999999999999999999999999999998762 2346
Q ss_pred ccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003664 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~ 226 (805)
.|.|++..-.+.+..+....|..++.+++|+|-++|.---.+|+..|++++...
T Consensus 291 ~s~~d~~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~~lt~dw~~iL~~~iKv~ 344 (936)
T KOG0248|consen 291 ASKIDIRSVTKLEQQGAAYAFQLITSTDKMNFMTESERTTHDWVTILSAAIKAT 344 (936)
T ss_pred cCcccccccceeeccchhHHhhhhhhceeEEEeccChhhhhhhHHHHHHHHHHH
Confidence 677777665566666667789999999999999999999999999999987654
No 51
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.83 E-value=9.8e-05 Score=68.92 Aligned_cols=88 Identities=16% Similarity=0.307 Sum_probs=65.8
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCccc
Q 003664 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (805)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G 174 (805)
+||||.-.++.-+.|||+|++|+...|++|++.... ++-.
T Consensus 2 kEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~~s----------------------------------------kyyK 41 (117)
T cd01239 2 KEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEESGS----------------------------------------RYYK 41 (117)
T ss_pred ccceEEEEecCccceeeeEEEecCCeEEEEEcCCCC----------------------------------------eeeE
Confidence 689999999999999999999999999999975432 2344
Q ss_pred EEEcCcc-EEEe-------cCCCCCcEEEEeCCeEEEEEcC--------------------CHHHHHHHHHHHHHH
Q 003664 175 EVHLKVS-SIRD-------SKSDDKRFSIFTGTKRLHLRAE--------------------TREDRFAWMEALQAV 222 (805)
Q Consensus 175 ~I~L~~s-si~~-------~~~d~~rF~I~t~~kt~~LrAe--------------------s~~dr~~WI~AL~~a 222 (805)
+|.|..- +|.. ....+..|.|.|++.+|++.++ ..+..+.|-.||+.|
T Consensus 42 eIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~vY~VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 42 EIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNVYFVGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred EeehHHheEEeccCCCcCCCCCCCcEEEEEecCEEEEecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 5555321 2221 1245889999999999999664 245568898888865
No 52
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.82 E-value=0.00012 Score=68.04 Aligned_cols=100 Identities=18% Similarity=0.215 Sum_probs=60.7
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCccc
Q 003664 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (805)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G 174 (805)
++|+|+-+.--.|+||+|||+|+..-|+|+-...... .+ -+..+.. + .+ ..
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgksk~----------sr-----dL~cl~~--f-~~-----------~n 52 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKTKN----------TR-----DLACLNL--L-HG-----------HN 52 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCCcCC----------HH-----HHHHHHh--c-cc-----------Cc
Confidence 6899998877789999999999999998887532210 00 0001100 0 00 00
Q ss_pred EEEcCccEEEecCCCCCcEEEEeC------Ce-EEEEEcCCHHHHHHHHHHHHHHH
Q 003664 175 EVHLKVSSIRDSKSDDKRFSIFTG------TK-RLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 175 ~I~L~~ssi~~~~~d~~rF~I~t~------~k-t~~LrAes~~dr~~WI~AL~~a~ 223 (805)
.-.....--.-...-|..|+|..+ .+ .-.|+|++++.+..||.||+-++
T Consensus 53 vY~~~~~kKk~kAPTd~~F~~K~~~~q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~K 108 (114)
T cd01259 53 VYTGLGWRKKYKSPTDYCFGFKAVGDQSKGSQSIKYLCAEDLPTLDRWLTAIRIAK 108 (114)
T ss_pred EEEEechhhccCCCCCceEEEeccccCcccchhheeeccCCHHHHHHHHHHHHHHh
Confidence 000000000112334778888653 13 36899999999999999999886
No 53
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.80 E-value=8.3e-05 Score=66.60 Aligned_cols=86 Identities=16% Similarity=0.186 Sum_probs=65.3
Q ss_pred ceEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 94 GISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL-~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
...|.+.|+.++ .+|+|=|+| +...|.|+..... ..
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~~~-----------------------------------------~~ 38 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPVKK-----------------------------------------VV 38 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEecCceEEEEcCCcC-----------------------------------------eE
Confidence 357999999876 479999999 5566777763211 24
Q ss_pred ccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
+|+|.+....++........|.|.|++|+|+|. +.....+.|+++|..+.
T Consensus 39 KgeIp~s~~~l~v~~~~~~~F~I~Tp~rty~le-D~~~~a~~W~~~I~~~~ 88 (89)
T cd01262 39 KGEIPWSDVELRVEVKNSSHFFVHTPNKVYSFE-DPKGRASQWKKAIEDLQ 88 (89)
T ss_pred EeEecccccceEEEEecCccEEEECCCceEEEE-CCCCCHHHHHHHHHHHh
Confidence 699999884444444456899999999999994 55688899999998874
No 54
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.49 E-value=0.00022 Score=82.70 Aligned_cols=98 Identities=20% Similarity=0.356 Sum_probs=62.9
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCC
Q 003664 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (805)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~ 171 (805)
.....|||.|.+...+ |++|||.|.+|.++.....++..-.. ..+
T Consensus 376 Dv~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~~~~~~~~~~----------------------------------~~~ 420 (478)
T PTZ00267 376 DVTHGGYLYKYSSDMR-WKKRYFYIGNGQLRISLSENPENDGV----------------------------------APK 420 (478)
T ss_pred CcccceEEeccCCCcc-hhhheEEecCCceEEEeccccccCCC----------------------------------CCc
Confidence 4567899999988776 99999999887777665433321000 001
Q ss_pred cccEEEcCc-cEEEe--cCCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 172 PFGEVHLKV-SSIRD--SKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 172 p~G~I~L~~-ssi~~--~~~d~~rF~I~t-~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
+.+...+.. +-+.. ....+..|.|.+ ..+++.+.|+|.++|..||.+||.|..
T Consensus 421 ~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 477 (478)
T PTZ00267 421 SVNLETVNDVFPVPEVYSQKHPNQLVLWFNNGQKIIAYAKTAEDRDQWISKFQRACG 477 (478)
T ss_pred cccHHHhcccccccHHhcCCCCceEEEEecCCcEEEEecCChHHHHHHHHHHHHHhC
Confidence 111111111 11211 123366787755 567888889999999999999999863
No 55
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.48 E-value=0.00027 Score=65.84 Aligned_cols=99 Identities=24% Similarity=0.296 Sum_probs=60.2
Q ss_pred EEEEeecC----CCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 97 GVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 97 G~L~K~~n----~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
|||..+.. ..+.||+||++|.++-|..|+...-.+-.-+.+ +..-+|+. ..
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p-~~~y~L~~------------------------~a 57 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRP-LYVYKLYD------------------------VA 57 (108)
T ss_pred eecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhCh-hhhChhHH------------------------hh
Confidence 88888743 347899999999999999999755311110000 00000000 00
Q ss_pred ccEEEcCccEEEecCCCCCcEEEEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTK--RLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~rF~I~t~~k--t~~LrAes~~dr~~WI~AL~~ 221 (805)
...++..... ......+..|.|.++++ +.+|+.|+..|+..|..||+.
T Consensus 58 trvv~~~~~~-~~~~~~~~~F~irtg~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 58 TRLVKNSSTR-RLNDQRDNCFLIRTGTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred hheeccCCcc-CcCCCCceEEEEEcCCceeeEEEEecCHHHHHHHHHHHhc
Confidence 0011110000 00124467899999985 699999999999999999975
No 56
>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]
Probab=97.45 E-value=8.1e-05 Score=84.67 Aligned_cols=108 Identities=26% Similarity=0.308 Sum_probs=72.1
Q ss_pred cCCCCcceEEEEEee-c--CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccch
Q 003664 88 NDIVGNGISGVLYKW-V--NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (805)
Q Consensus 88 ~~~~~~~~~G~L~K~-~--n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~ 164 (805)
++..++.++|-|.-+ | .++|.|+.|||.|.+..|.|-|.+.++... + .-|. ++.|++.+.
T Consensus 730 n~~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~-------~-~~ID---l~~IRSVk~------ 792 (851)
T KOG3723|consen 730 NQDGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSD-------D-CPID---LSKIRSVKA------ 792 (851)
T ss_pred cCCCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCC-------C-CCcc---HHHhhhHHH------
Confidence 445567899999733 3 478999999999999999998865542100 0 0000 011110000
Q ss_pred hcccCCCcccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003664 165 QRLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (805)
Q Consensus 165 ~~~~~~~p~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~~ 227 (805)
++.-+..++-.+-|.|||.++||.|+|.+++..++|++.|+-|.+...
T Consensus 793 ---------------v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~ 840 (851)
T KOG3723|consen 793 ---------------VAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAK 840 (851)
T ss_pred ---------------HHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHH
Confidence 000111233477899999999999999999999999999999877644
No 57
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.40 E-value=0.0007 Score=80.40 Aligned_cols=97 Identities=18% Similarity=0.310 Sum_probs=64.2
Q ss_pred CcceEEEEEeec-CCCC-C-ceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhccc
Q 003664 92 GNGISGVLYKWV-NYGK-G-WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (805)
Q Consensus 92 ~~~~~G~L~K~~-n~~k-g-Wk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~ 168 (805)
.+.++|||+-.+ |.++ . -+.|||||++..|.|||.+..++ .
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~-~----------------------------------- 46 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDN-Q----------------------------------- 46 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccc-c-----------------------------------
Confidence 356899999975 3322 2 68999999999999999865432 1
Q ss_pred CCCcccEEEcCccEEEecCC----CCCcEEEEe------CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003664 169 NRKPFGEVHLKVSSIRDSKS----DDKRFSIFT------GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (805)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~~----d~~rF~I~t------~~kt~~LrAes~~dr~~WI~AL~~a~~~~ 226 (805)
.|..+.-+.++.-.++.. ..+.|+|.+ .++...|-|.|.+|...||+||+.|++..
T Consensus 47 --~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 47 --VPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred --ccceeeccCCCceEeecCceEEcCceEEEEEEecCCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 122222222222111111 123344433 45789999999999999999999999964
No 58
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.31 E-value=0.00048 Score=80.58 Aligned_cols=97 Identities=22% Similarity=0.343 Sum_probs=70.3
Q ss_pred CCcceEEEEE-eecC----CC-CCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccch
Q 003664 91 VGNGISGVLY-KWVN----YG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (805)
Q Consensus 91 ~~~~~~G~L~-K~~n----~~-kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~ 164 (805)
.++.++|.|. |+.. .+ +.+|+|||-|.+..|+|.|+.+.
T Consensus 562 ~p~v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~----------------------------------- 606 (800)
T KOG2059|consen 562 EPVVLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPGK----------------------------------- 606 (800)
T ss_pred CCceecccceEeccccccchhhhhhhheEEEeccceeEEecCCcc-----------------------------------
Confidence 3455555554 4422 22 45889999999999999997543
Q ss_pred hcccCCCcccEEEcCccE----EEecC-CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003664 165 QRLLNRKPFGEVHLKVSS----IRDSK-SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (805)
Q Consensus 165 ~~~~~~~p~G~I~L~~ss----i~~~~-~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~~~ 228 (805)
+|.+.|.|..-- +.+.. ...+.|.|++.+|+++|+|.+-.|..+|+.||..+..+-+.
T Consensus 607 ------q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~drtly~Q~~n~vEandWldaL~kvs~~N~~ 669 (800)
T KOG2059|consen 607 ------QPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTDRTLYVQAKNCVEANDWLDALRKVSCCNQN 669 (800)
T ss_pred ------CcccceeHHHHHHHHHhhhhccCCCceEEEEecCcceeEecCCchHHHHHHHHHHHHhccCcc
Confidence 467888775322 11111 23678999999999999999999999999999998765443
No 59
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.28 E-value=0.0017 Score=61.98 Aligned_cols=33 Identities=33% Similarity=0.479 Sum_probs=29.2
Q ss_pred CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 191 KRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 191 ~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
..|.|.++.|++.|.|.|.++...|+.||+.-.
T Consensus 89 ~si~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~ 121 (123)
T PF12814_consen 89 KSIIIVTPDRSLDLTAPSRERHEIWFNALRYLL 121 (123)
T ss_pred eEEEEEcCCeEEEEEeCCHHHHHHHHHHHHHHh
Confidence 446688999999999999999999999998754
No 60
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.25 E-value=0.00011 Score=83.72 Aligned_cols=42 Identities=26% Similarity=0.359 Sum_probs=34.1
Q ss_pred ccCCCCcceEEEEEeec-CCC-CCceeeEEEE-eCCeEEEEeecC
Q 003664 87 INDIVGNGISGVLYKWV-NYG-KGWRPRWFVL-QDGVLSYYKIHG 128 (805)
Q Consensus 87 ~~~~~~~~~~G~L~K~~-n~~-kgWk~RwFVL-~dg~LsYYk~~~ 128 (805)
-.+...++++|.|.|+. +.. |.||+.|..| .+|+|.||-+-+
T Consensus 296 gsGRAIPIKQg~LlKrSgk~L~keWKKKYVtlcsnG~LtYh~sL~ 340 (749)
T KOG0705|consen 296 GSGRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCSNGVLTYHPSLG 340 (749)
T ss_pred cCCcccchhhhhHHHhcchHHHHHHhhhheeeccCcceeecccHH
Confidence 34555789999999984 444 8999999999 899999997543
No 61
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.15 E-value=0.0045 Score=56.82 Aligned_cols=87 Identities=20% Similarity=0.224 Sum_probs=63.8
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
.++|.|.-++. =+.|+.-|=+.+|-|.|..++ + ..-+
T Consensus 5 lleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~~-~--------------------------------------y~~K 41 (97)
T cd01222 5 LLEGRFREHGG----GKPRLLFLFQTMLLIAKPRGD-K--------------------------------------YQFK 41 (97)
T ss_pred eeeceEEeecC----CCceEEEEecccEEEEEecCC-e--------------------------------------eEEE
Confidence 46788875443 357988888899999996543 1 1234
Q ss_pred cEEEcCccEEEecC-CCCCcEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSK-SDDKRFSIFTGT---KRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 174 G~I~L~~ssi~~~~-~d~~rF~I~t~~---kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
..|.+..-.|.++. .|+++|.|...+ ++|.|+|.|.+++..||++|+.+.
T Consensus 42 ~~i~~~~l~i~e~~~~d~~~F~v~~~~~p~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 42 AYIPCKNLMLVEHLPGEPLCFRVIPFDDPKGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred EEEEecceEEecCCCCCCcEEEEEecCCCceEEEEEecCHHHHHHHHHHHHHHh
Confidence 55666655555553 358999997643 689999999999999999999874
No 62
>PLN02866 phospholipase D
Probab=97.11 E-value=0.0029 Score=78.03 Aligned_cols=112 Identities=18% Similarity=0.253 Sum_probs=72.0
Q ss_pred CCcceEEEEEeec-----C------C---------CCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchh
Q 003664 91 VGNGISGVLYKWV-----N------Y---------GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEEST 150 (805)
Q Consensus 91 ~~~~~~G~L~K~~-----n------~---------~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~ 150 (805)
..-.+|||++|+. . . ...|++|||||+++.|.|.+...+.++. .+-|+..
T Consensus 180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~-------~v~lfD~--- 249 (1068)
T PLN02866 180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPL-------DIIVFDV--- 249 (1068)
T ss_pred CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCcee-------EEEEEec---
Confidence 3466799999982 1 0 1359999999999999999765553322 1111110
Q ss_pred hhhhhcccccccchhcccCCCcccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003664 151 RIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (805)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~~ 227 (805)
++.. ..+--|.|.|..- +.+...-...|.|.+++|++.|+|.|.....+|+.+|+.+....+
T Consensus 250 ------~~~~--------~~~~~~~~~~~~~-~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~~ 311 (1068)
T PLN02866 250 ------LPAS--------NGNGEGQISLAKE-IKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRPP 311 (1068)
T ss_pred ------cccc--------ccCCCcceeeccc-ccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhccC
Confidence 0000 0011244444222 122223366789999999999999999999999999999985544
No 63
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.91 E-value=0.011 Score=55.36 Aligned_cols=93 Identities=15% Similarity=0.247 Sum_probs=66.6
Q ss_pred ceEEEEEeecCCCCCc-eeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 94 GISGVLYKWVNYGKGW-RPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgW-k~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
+.+|-|.+-+. .+|| +.|.|-|=|+.|.|.|...-. .....-
T Consensus 3 i~~Gel~~~s~-~~g~~q~R~~FLFD~~LI~CKkd~~r------------------------------------~~~~~y 45 (109)
T cd01224 3 FLQGEATRQKQ-NKGWNSSRVLFLFDHQMVLCKKDLIR------------------------------------RDHLYY 45 (109)
T ss_pred eEeeeEEEEec-ccCCcccEEEEEecceEEEEeccccc------------------------------------CCcEEE
Confidence 56888888662 3444 579999999999999942100 001235
Q ss_pred ccEEEcCccEEEecCCC---------CCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDSKSD---------DKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~~d---------~~rF~I~t~~--kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
+|.|.|..+.|....+. .+.|.|...+ +.|.|.|.|+++++.||+||..-+
T Consensus 46 Kgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~~~~~~f~~Kt~e~K~~Wm~a~~~er 107 (109)
T cd01224 46 KGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSESTDEWYLFSFKSAERKHRWLSAFALER 107 (109)
T ss_pred EEEEEcccEEEEECCCCccccCCceeEEEEEEEEcCCCeEEEEEECCHHHHHHHHHHHHHhh
Confidence 78999998887654322 3457777654 679999999999999999998654
No 64
>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]
Probab=96.81 E-value=0.0026 Score=73.05 Aligned_cols=102 Identities=23% Similarity=0.348 Sum_probs=71.6
Q ss_pred CCCCcceEEEEEee--cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhc
Q 003664 89 DIVGNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (805)
Q Consensus 89 ~~~~~~~~G~L~K~--~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~ 166 (805)
...+.+++||||-+ ..+++.|-+-||+.+...-.+ +|-+...+ .|
T Consensus 261 ~p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~---------TMvp~~qk-------------------~g----- 307 (812)
T KOG1451|consen 261 RPTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIF---------TMVPANQK-------------------TG----- 307 (812)
T ss_pred CCCCcccceeeeehhhhhccchhhhheeEeecccceE---------EEeecccC-------------------CC-----
Confidence 34568899999987 578999999999874322111 11110000 00
Q ss_pred ccCCCcccEEEcCccEEEecCCCCCcEE--EEeCCe--EEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 167 LLNRKPFGEVHLKVSSIRDSKSDDKRFS--IFTGTK--RLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~~~~d~~rF~--I~t~~k--t~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
....+..++.|+-|+-+..++.|+||| |.+..| +..++|-|++||..||+|+-.+.-
T Consensus 308 -~k~g~~~~~~lKsC~RRktdSIdKRFCFDve~~erpgviTmQALSE~drrlWmeAMDG~ep 368 (812)
T KOG1451|consen 308 -TKMGQTATFKLKSCSRRKTDSIDKRFCFDVEVEERPGVITMQALSEKDRRLWMEAMDGAEP 368 (812)
T ss_pred -CcCCCcceEEehhhccCcccccccceeeeeeecccCCeeehHhhhhhHHHHHHHHhcCCCc
Confidence 011255678999999888888899988 555554 799999999999999999988743
No 65
>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]
Probab=96.67 E-value=0.0064 Score=69.40 Aligned_cols=107 Identities=21% Similarity=0.288 Sum_probs=66.6
Q ss_pred cCCCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcc
Q 003664 88 NDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (805)
Q Consensus 88 ~~~~~~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~ 167 (805)
+..+.+.++|+||-+.--.|+||+-||||+..-|||+-+..... . +. +..+. .+...
T Consensus 312 ~s~~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~tsk~-~------r~--------Lq~l~--~~~~s------ 368 (622)
T KOG3751|consen 312 SSSSPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTSKE-P------RH--------LQCLA--DLHSS------ 368 (622)
T ss_pred hcCCCccccceeeecccccccceeEEEEEecCcceEccCCCCCC-c------hh--------hHHHH--hcccC------
Confidence 34567899999999988889999999999999999987533210 0 00 00110 00000
Q ss_pred cCCCcccEEEcC-ccEEEecCCCCCcEEEEeC-----CeE-EEEEcCCHHHHHHHHHHHHHHHH
Q 003664 168 LNRKPFGEVHLK-VSSIRDSKSDDKRFSIFTG-----TKR-LHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 168 ~~~~p~G~I~L~-~ssi~~~~~d~~rF~I~t~-----~kt-~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
.|-.. +-.-.-...-|..|+|... +|- =+|+||++.-|..|+.||+-+|-
T Consensus 369 -------nVYt~i~~rKkyksPTd~~f~~K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl~Ky 425 (622)
T KOG3751|consen 369 -------NVYTGIGGRKKYKSPTDYGFCIKPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRLLKY 425 (622)
T ss_pred -------ceEEeecchhccCCCCCceEEeeeccccCcccceeeeecccchhHHHHHHHHHHHHH
Confidence 00000 0000001223788988752 233 47999999999999999999864
No 66
>PF15406 PH_6: Pleckstrin homology domain
Probab=96.56 E-value=0.0056 Score=56.74 Aligned_cols=50 Identities=22% Similarity=0.377 Sum_probs=40.7
Q ss_pred CcccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003664 171 KPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~ 221 (805)
.|.|.|+|...+- +..+....|.+...+....|+|.|..||..||.+|..
T Consensus 62 ~P~GiinLadase-~~~~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk~ 111 (112)
T PF15406_consen 62 SPSGIINLADASE-PEKDGSNKFHFKIKGHKHTFEAASAAERDNWVAQLKA 111 (112)
T ss_pred CCcceEehhhccc-cccCCCceEEEEeCCceeeeecCCHHHhccHHHHhhc
Confidence 4889999966542 1234468899888999999999999999999999864
No 67
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=96.29 E-value=0.0013 Score=78.10 Aligned_cols=97 Identities=26% Similarity=0.416 Sum_probs=70.5
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCC
Q 003664 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (805)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~ 171 (805)
-...+|||...-..-.||++=|.|..+-+|++||++.|+.
T Consensus 923 e~qLsg~LlrkfknssgwqkLwvvft~fcl~fyKS~qD~~---------------------------------------- 962 (1036)
T KOG3531|consen 923 ENQLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQDSE---------------------------------------- 962 (1036)
T ss_pred HhhhhHHHHHHhhccccceeeeeeecceeeEeeccccccc----------------------------------------
Confidence 3567899976644445999999999999999999988731
Q ss_pred cccEEEcCccEEEe-cCCC----CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003664 172 PFGEVHLKVSSIRD-SKSD----DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (805)
Q Consensus 172 p~G~I~L~~ssi~~-~~~d----~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~~~ 228 (805)
|..++.|.+.++.. ...| +.-|.+.-..-+|+|||++.---..||+.|+.+-....+
T Consensus 963 ~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffraes~yt~~rw~evi~~a~~s~d~ 1024 (1036)
T KOG3531|consen 963 PLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFRAESYYTFERWMEVITDAPSSADR 1024 (1036)
T ss_pred ccccccccccccCCCCCCCCcchhheeeeehhhhHHHHhhhhhhhhhhHHHHhhcCCccCCC
Confidence 23344454444322 1122 455667777888999999999999999999998665443
No 68
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.27 E-value=0.027 Score=54.04 Aligned_cols=79 Identities=19% Similarity=0.233 Sum_probs=51.3
Q ss_pred ceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcccEEEcCccEEEe---
Q 003664 109 WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD--- 185 (805)
Q Consensus 109 Wk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~--- 185 (805)
-++||+-|=+++|-|-|.+...+..|.. .-|++.|.+.......
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V~d---------------------------------y~~r~~l~V~~~e~~~~~~ 73 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVVFD---------------------------------YAPRSFLRVEKIEPDNQKI 73 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEEEe---------------------------------eccccceEEeecccccccc
Confidence 4688999999999999877665544421 1133434333221110
Q ss_pred -----cCCCCCcEEEE------eCCeEEEEEcCCHHHHHHHHHHHH
Q 003664 186 -----SKSDDKRFSIF------TGTKRLHLRAETREDRFAWMEALQ 220 (805)
Q Consensus 186 -----~~~d~~rF~I~------t~~kt~~LrAes~~dr~~WI~AL~ 220 (805)
.....+.|.|. .-++.+.|+|+|+.||.+||+||.
T Consensus 74 ~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al~ 119 (125)
T cd01221 74 PLGSNLVGRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSALA 119 (125)
T ss_pred cccccccCCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhcC
Confidence 11236778875 224569999999999999999984
No 69
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=96.09 E-value=0.019 Score=68.67 Aligned_cols=91 Identities=23% Similarity=0.389 Sum_probs=64.0
Q ss_pred CCcceEEEEEeecCCCC----------CceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhccccc
Q 003664 91 VGNGISGVLYKWVNYGK----------GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKK 160 (805)
Q Consensus 91 ~~~~~~G~L~K~~n~~k----------gWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~ 160 (805)
..+...|+||+.-...+ --.++|+||.+|.|+||.+...
T Consensus 490 ~s~~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~S------------------------------- 538 (1186)
T KOG1117|consen 490 QSTFLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEKS------------------------------- 538 (1186)
T ss_pred ccccccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcCC-------------------------------
Confidence 34566899998743322 2468999999999999997543
Q ss_pred ccchhcccCCCcccEEEcCcc-EEEecCCCCC-------cEEEEe-CCeEEEEEcCCHHHHHHHHHHHHH
Q 003664 161 ETTSQRLLNRKPFGEVHLKVS-SIRDSKSDDK-------RFSIFT-GTKRLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 161 ~~~~~~~~~~~p~G~I~L~~s-si~~~~~d~~-------rF~I~t-~~kt~~LrAes~~dr~~WI~AL~~ 221 (805)
..|.|.|++..- .+..+..++. .|.|.. ++|.|+|-+++++....|..|+..
T Consensus 539 ---------~tP~~lI~~~Eivclav~~pd~~pn~~~~f~fE~~l~~er~~~fgle~ad~l~~wt~aiaK 599 (1186)
T KOG1117|consen 539 ---------TTPNGLININEIVCLAVHPPDTYPNTGFIFIFEIYLPGERVFLFGLETADALRKWTEAIAK 599 (1186)
T ss_pred ---------CCCCceeeccceEEEeecCCCCCCCcCceeEEEEeecccceEEeecccHHHHHHHHHHHHH
Confidence 127788888532 2333444422 345655 578999999999999999999854
No 70
>PF15404 PH_4: Pleckstrin homology domain
Probab=95.77 E-value=0.049 Score=55.69 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=29.6
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEee
Q 003664 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKI 126 (805)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~ 126 (805)
++|+||.+.+....++++++||-.|.|.-|+.
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~ 32 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQL 32 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEE
Confidence 47999999988899999999999999999987
No 71
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=95.61 E-value=0.0062 Score=72.67 Aligned_cols=94 Identities=22% Similarity=0.362 Sum_probs=73.7
Q ss_pred CCcceEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccC
Q 003664 91 VGNGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (805)
Q Consensus 91 ~~~~~~G~L~K~~n~~-kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~ 169 (805)
.+++++|||.|-.--+ --.++||.-++...|.||.+..+
T Consensus 85 sp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k~---------------------------------------- 124 (1186)
T KOG1117|consen 85 SPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPKD---------------------------------------- 124 (1186)
T ss_pred CchhhcchhhccCcCcccccCccceecCCCCccccCCCCC----------------------------------------
Confidence 3588999999964322 22799999999999999996543
Q ss_pred CCcccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 170 RKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
..++|.|.|...+... ...+..|.|+++.|+|.+++++..+|..||.+|+++...
T Consensus 125 py~k~~i~va~is~v~-~~gd~kfevitn~r~fvfr~e~~~~r~~w~s~l~s~~~~ 179 (1186)
T KOG1117|consen 125 PYSKGPIPVAAISAVR-NFGDNKFEVITNQRTFVFRQESEGERFIWVSPLQSALKE 179 (1186)
T ss_pred CCCCCceeeehhhhhh-hccCceEEEEecceEEEEecCCcccceeeechhhhcchh
Confidence 1246777776554322 345889999999999999999999999999999998654
No 72
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=95.39 E-value=0.025 Score=65.56 Aligned_cols=102 Identities=17% Similarity=0.263 Sum_probs=74.3
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCC
Q 003664 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (805)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~ 171 (805)
..+++|.|.|.+.....-+.||.+|=+.+|.|-+-+.. +.|. ...
T Consensus 271 eLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~--------------~~~~---------------------k~~ 315 (623)
T KOG4424|consen 271 ELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKR--------------LPGS---------------------KYE 315 (623)
T ss_pred HHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhh--------------cccc---------------------eec
Confidence 46789999999877788999999998888989884321 0000 011
Q ss_pred cccEEEcCccEEEecCCC--CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003664 172 PFGEVHLKVSSIRDSKSD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (805)
Q Consensus 172 p~G~I~L~~ssi~~~~~d--~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~~~ 228 (805)
++-.+.+..+.+..+... ...|.+....+.+.|+|.|.++..+||++|+.+++.+..
T Consensus 316 ~r~~~s~~~~~v~~~~~~~~~~tF~~~G~~r~vel~a~t~~ek~eWv~~I~~~Id~~kq 374 (623)
T KOG4424|consen 316 VRARCSISHMQVQEDDNEELPHTFILTGKKRGVELQARTEQEKKEWVQAIQDAIDKHKQ 374 (623)
T ss_pred cceeeccCcchhcccccccCCceEEEecccceEEeecCchhhHHHHHHHHHHHHHHHHH
Confidence 233344444444433333 667888777999999999999999999999999988765
No 73
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.18 E-value=0.024 Score=65.29 Aligned_cols=117 Identities=21% Similarity=0.296 Sum_probs=75.9
Q ss_pred CCCccccccCCCCcceEEEEEeec---------CCC-CCceeeEEEEeCCeEEEEeecCCC-ccccchhhhccccccccc
Q 003664 80 AEPVDVKINDIVGNGISGVLYKWV---------NYG-KGWRPRWFVLQDGVLSYYKIHGPD-KIIVSEETERGCKVIGEE 148 (805)
Q Consensus 80 ~~~~~~~~~~~~~~~~~G~L~K~~---------n~~-kgWk~RwFVL~dg~LsYYk~~~~~-~i~~~~~~~~~~~vig~~ 148 (805)
.+-.++.....+.+.+.|+|..+. -.+ +|||.-|-||++-+||+-|.+-.. +..+ +.+
T Consensus 493 ~pfldv~~dpsa~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kals-----------e~~ 561 (774)
T KOG0932|consen 493 NPFLDVPPDPSAATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALS-----------ESD 561 (774)
T ss_pred CccccCCCCCCchhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchh-----------hhh
Confidence 455788888888899999997542 233 479999999998888887754321 1000 000
Q ss_pred hhhhhhhcccccccchhcccCCCcccEEEcCccEEEecC-CCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003664 149 STRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDSK-SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMF 226 (805)
Q Consensus 149 s~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~~~-~d~~rF~I~t~~-kt~~LrAes~~dr~~WI~AL~~a~~~~ 226 (805)
.+ .+.+ ||=..++-..+- .....|.+.|.. |.|.|+|.|.++++.||..|+-|.+.|
T Consensus 562 ------------------lk--navs-vHHALAt~AtdY~KKp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA~f 620 (774)
T KOG0932|consen 562 ------------------LK--NAVS-VHHALATPATDYSKKPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAAAF 620 (774)
T ss_pred ------------------hh--hhhh-hhhhhcCCCcccccCCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 00 0111 111112211111 125668888864 889999999999999999999999998
Q ss_pred cc
Q 003664 227 PR 228 (805)
Q Consensus 227 ~~ 228 (805)
+-
T Consensus 621 Sa 622 (774)
T KOG0932|consen 621 SA 622 (774)
T ss_pred cC
Confidence 75
No 74
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=94.95 E-value=0.023 Score=52.74 Aligned_cols=92 Identities=14% Similarity=0.244 Sum_probs=59.5
Q ss_pred cceEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCC
Q 003664 93 NGISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (805)
Q Consensus 93 ~~~~G~L~K~~n~-~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~ 171 (805)
.++.||+.|.|+- ...||+|||-|-.+-|-+|-..+..+.
T Consensus 3 cIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~~~--------------------------------------- 43 (116)
T cd01240 3 CIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEANKP--------------------------------------- 43 (116)
T ss_pred eEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccccCC---------------------------------------
Confidence 4789999999764 467999999998888888643221110
Q ss_pred cccEEEcC-ccEEE---ecCCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 172 PFGEVHLK-VSSIR---DSKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 172 p~G~I~L~-~ssi~---~~~~d~~rF~I~t-~~kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
--|.+. +-.|. .--..+++..|.. +++.|.|++++.-+..+|..-|+.+-..
T Consensus 44 --eLi~M~~i~~V~~e~~~iK~~~CI~ik~k~~~k~vlt~~d~i~l~qW~~elr~a~r~ 100 (116)
T cd01240 44 --ELITMDQIEDVSVEFQQIKEENCILLKIRDEKKIVLTNSDEIELKQWKKELRDAHRE 100 (116)
T ss_pred --cEEEeehhhhcchhheeeccCceEEEEEcCCceEEEecCCcHHHHHHHHHHHHHHHH
Confidence 111111 01010 0012345555544 5778999999999999999999887554
No 75
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.55 E-value=0.29 Score=45.24 Aligned_cols=52 Identities=15% Similarity=0.272 Sum_probs=39.9
Q ss_pred ccEEEcCccEE---EecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSI---RDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 173 ~G~I~L~~ssi---~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
..++.|..-.| ..+..-.+.|.|.++.+++.++|+|++++.+||+.|+.|+.
T Consensus 45 ~~~~~L~~i~V~ni~D~~~~kNafki~t~~~s~i~qaes~~~K~eWl~~le~a~~ 99 (100)
T cd01226 45 ESTYSLNSVAVVNVKDRENAKKVLKLLIFPESRIYQCESARIKTEWFEELEQAKR 99 (100)
T ss_pred EEEEehHHeEEEecCCCcCcCceEEEEeCCccEEEEeCCHHHHHHHHHHHHHHhc
Confidence 35566643332 22222378899999999999999999999999999999874
No 76
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=94.27 E-value=0.014 Score=68.26 Aligned_cols=89 Identities=6% Similarity=-0.270 Sum_probs=63.0
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCC
Q 003664 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (805)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~ 170 (805)
.-+...|+|.|+...+|.||.|||++.+|.+.||+++-+.
T Consensus 257 ~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~---------------------------------------- 296 (936)
T KOG0248|consen 257 QLTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDI---------------------------------------- 296 (936)
T ss_pred cchHHHHHHHhHheeeccceEEEEEcCCCccccccCcccc----------------------------------------
Confidence 3457789999999999999999999999999999976541
Q ss_pred CcccEEEcCc-cEE-EecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003664 171 KPFGEVHLKV-SSI-RDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 171 ~p~G~I~L~~-ssi-~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a 222 (805)
+.|++-+.. |++ ....... -...+-+.+++|-++...-.++||.+++..
T Consensus 297 -~s~~~~~~~~~s~~fqli~~t--~~~~~~~~s~~lt~dw~~iL~~~iKv~~~~ 347 (936)
T KOG0248|consen 297 -RSVTKLEQQGAAYAFQLITST--DKMNFMTESERTTHDWVTILSAAIKATTLR 347 (936)
T ss_pred -cccceeeccchhHHhhhhhhc--eeEEEeccChhhhhhhHHHHHHHHHHHhcc
Confidence 233443332 221 1111111 223444567899999999999999999875
No 77
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.08 E-value=0.27 Score=44.88 Aligned_cols=90 Identities=18% Similarity=0.150 Sum_probs=61.6
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
..+|+|.|-. .+.=|.|=|-|=+.+|.|-+..... |. .....+..
T Consensus 4 v~eg~lvel~--~~~rK~R~~FLFnDlLvc~~ik~~~---------------~~------------------k~~kY~~~ 48 (96)
T cd01228 4 VKDSFLVELV--EGSRKLRHLFLFTDVLLCAKLKKTS---------------RG------------------KHQQYDCK 48 (96)
T ss_pred cccceeeeeh--hCCCcceEEEeeccEEEEEEeeecc---------------Cc------------------ccccccee
Confidence 4689999965 3456788888888889888864210 00 01122345
Q ss_pred cEEEcCccEEEecCCCCCcEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 174 GEVHLKVSSIRDSKSDDKRFSI-FTGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 174 G~I~L~~ssi~~~~~d~~rF~I-~t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
-.|+|..-.+.... |.+ .+++|+|.+.|.|..||.+||++|+.-.
T Consensus 49 w~IPL~dl~~~~~~-----~~~~~~~~KSf~~~asS~~Er~eW~~hI~~~~ 94 (96)
T cd01228 49 WYIPLADLSFPSEP-----FRIHNKNGKSYTFLLSSDYERSEWRESIQKLQ 94 (96)
T ss_pred EEEEhHHheecchh-----hhccccCCceEEEEecCHHHHHHHHHHHHHHh
Confidence 67888765554331 444 5689999999999999999999997643
No 78
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=93.88 E-value=0.95 Score=42.91 Aligned_cols=52 Identities=17% Similarity=0.504 Sum_probs=40.4
Q ss_pred ccEEEcCccEEEecC-CCCCcEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 173 FGEVHLKVSSIRDSK-SDDKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~-~d~~rF~I~t~~-----kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
+..|.|..-.+.++. .|+++|.|...+ .+|.|+|.|.+.++.||..|+.+.+
T Consensus 56 K~~ikls~l~l~e~v~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 56 KSKLQVSKMGLTEHVEGDPCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred ecceeeeeeEeEEccCCCCceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 466666655666554 568999986543 5899999999999999999998754
No 79
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=93.43 E-value=0.17 Score=59.37 Aligned_cols=35 Identities=31% Similarity=0.610 Sum_probs=30.1
Q ss_pred CCcEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 190 DKRFSI-FTGTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 190 ~~rF~I-~t~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
+.-|.+ ++++|.+-|+|.+.++|+.||.+||.+..
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 455 AHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred CcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 556775 45789999999999999999999999864
No 80
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=93.25 E-value=0.65 Score=43.62 Aligned_cols=34 Identities=32% Similarity=0.602 Sum_probs=29.0
Q ss_pred CCCCcEEEEeCC----eEEEEEcCCHHHHHHHHHHHHH
Q 003664 188 SDDKRFSIFTGT----KRLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 188 ~d~~rF~I~t~~----kt~~LrAes~~dr~~WI~AL~~ 221 (805)
..++.|+|+-+. +++||-|.|.++++.|++.|+.
T Consensus 77 ~e~~~fTIiy~~~~~~k~L~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 77 LEERCFTIVYGTDLNLKSLDLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred ccccEEEEEECCCCCeeEEEEEECCHHHHHHHHHHHhh
Confidence 347889987764 5799999999999999999974
No 81
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=92.79 E-value=0.042 Score=63.74 Aligned_cols=93 Identities=22% Similarity=0.397 Sum_probs=61.8
Q ss_pred CcceEEEEEeec-CCCCCceeeEEEEeC-C----eEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchh
Q 003664 92 GNGISGVLYKWV-NYGKGWRPRWFVLQD-G----VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (805)
Q Consensus 92 ~~~~~G~L~K~~-n~~kgWk~RwFVL~d-g----~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~ 165 (805)
+-..+||||--+ |..|.||+|||||-. . .++-|+.
T Consensus 463 nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyre--------------------------------------- 503 (1218)
T KOG3543|consen 463 NMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYRE--------------------------------------- 503 (1218)
T ss_pred ccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhh---------------------------------------
Confidence 445679999875 788999999999932 1 1122221
Q ss_pred cccCCCcccEEEcCccEEEecCCC-----CCc-EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 166 RLLNRKPFGEVHLKVSSIRDSKSD-----DKR-FSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 166 ~~~~~~p~G~I~L~~ssi~~~~~d-----~~r-F~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
+...|.--|.|.+-+|...+.. .+. |.-+..+-+..|..+++.||.-||+|+-.|...
T Consensus 504 --kkaepqel~qldgytvdytdp~pglqgg~~ffnavkegdtvifasddeqdr~lwvqamyratgq 567 (1218)
T KOG3543|consen 504 --KKAEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAVKEGDTVIFASDDEQDRHLWVQAMYRATGQ 567 (1218)
T ss_pred --cccChHHHhhccCeeeccCCCCCccccchHHHHHhccCceEEeccCchhhhhHHHHHHHHhhCC
Confidence 1223556677877776543322 222 344445668889999999999999999877643
No 82
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=91.04 E-value=1.1 Score=42.00 Aligned_cols=79 Identities=20% Similarity=0.206 Sum_probs=57.0
Q ss_pred CCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcccEEEcCccEEEe-
Q 003664 107 KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD- 185 (805)
Q Consensus 107 kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~- 185 (805)
..=..|||||=.++|......... .+-.-.|.+.|+.-+|..
T Consensus 26 qe~~eRyLvLFp~~LlilS~s~r~-------------------------------------sGf~yqGkLPL~~i~v~~l 68 (111)
T cd01225 26 EEKRERYLVLFPNVLLMLSASPRM-------------------------------------SGFIYQGKLPLTGIIVTRL 68 (111)
T ss_pred cccceeEEEEcCceEEEEEcCCCc-------------------------------------cceEEeeeecccccEEech
Confidence 345789999988888877642210 011245889998888873
Q ss_pred -c-CCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003664 186 -S-KSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 186 -~-~~d~~rF~I~t~~-kt~~LrAes~~dr~~WI~AL~~a 222 (805)
. ....+.|.|..+. -+..+.|.+.+|.++||.-|+.-
T Consensus 69 Ed~e~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~hL~~~ 108 (111)
T cd01225 69 EDTEALKNAFEISGPLIERIVVVCNNPQDAQEWVELLNAN 108 (111)
T ss_pred HhccCccceEEEeccCcCcEEEEeCCHHHHHHHHHHHHhh
Confidence 2 2226789998765 57888899999999999999874
No 83
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=88.41 E-value=5.5 Score=38.84 Aligned_cols=54 Identities=24% Similarity=0.381 Sum_probs=40.9
Q ss_pred cccEEEcCccEEEec-CCCCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 172 PFGEVHLKVSSIRDS-KSDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 172 p~G~I~L~~ssi~~~-~~d~~rF~I~t~~--kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
-++.|.|..-.+.++ ..|+++|.|-+.. .+|.|+|.|.+.++.||..|+.....
T Consensus 61 yK~~ikls~lglte~v~gd~~kFeiw~~~~~~~yilqA~t~e~K~~Wv~~I~~iL~~ 117 (133)
T cd01227 61 FKQSLKMTAVGITENVKGDTKKFEIWYNAREEVYILQAPTPEIKAAWVNEIRKVLTS 117 (133)
T ss_pred EeeeEEeecccccccCCCCccEEEEEeCCCCcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 356666655555554 3457899998754 47999999999999999999987654
No 84
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=86.78 E-value=5.2 Score=38.11 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=27.4
Q ss_pred cEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 192 RFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 192 rF~I~t~~--kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
.|.|.... ..|.|.|.|++++..||+||..|+.-
T Consensus 78 ~f~L~~~~~~~~~~f~~Ktee~K~kWm~al~~a~sn 113 (116)
T cd01223 78 GFYLAHKQGKTGFTFYFKTEHLRKKWLKALEMAMSN 113 (116)
T ss_pred EEEEEecCCCccEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 35565543 45999999999999999999998763
No 85
>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]
Probab=83.81 E-value=0.21 Score=57.90 Aligned_cols=53 Identities=17% Similarity=0.314 Sum_probs=40.4
Q ss_pred cccEEEcCccEEEecCCC-CCc---EEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 172 PFGEVHLKVSSIRDSKSD-DKR---FSIFT---GTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 172 p~G~I~L~~ssi~~~~~d-~~r---F~I~t---~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
|-+.|+|++|.+.++..+ .-. |.|.. +...++|||++++....||.|-+.|..
T Consensus 400 p~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~WMAaCrLASK 459 (664)
T KOG3727|consen 400 PAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYARWMAACRLASK 459 (664)
T ss_pred CCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHHHHHHhhHhhc
Confidence 668889999988877665 233 34332 456799999999999999999887744
No 86
>PF15408 PH_7: Pleckstrin homology domain
Probab=83.69 E-value=0.59 Score=41.76 Aligned_cols=32 Identities=22% Similarity=0.412 Sum_probs=25.0
Q ss_pred EEEEEeecCCCCCceeeEEEEeCCeEEEEeecCC
Q 003664 96 SGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGP 129 (805)
Q Consensus 96 ~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~ 129 (805)
+||||.-- -..-|+||.+|....|.+|..++.
T Consensus 1 EGYLY~~E--~~si~rRF~~L~~K~~~~~~~KGG 32 (104)
T PF15408_consen 1 EGYLYRDE--DSSIQRRFVMLRSKQFNMYEDKGG 32 (104)
T ss_pred CCeEEEec--cchHHHHHHhhhhceeEEecccCC
Confidence 58998732 123789999999999999998775
No 87
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=82.24 E-value=0.021 Score=62.96 Aligned_cols=79 Identities=29% Similarity=0.489 Sum_probs=60.9
Q ss_pred CceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcccEEEcCccEE--Ee
Q 003664 108 GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSI--RD 185 (805)
Q Consensus 108 gWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi--~~ 185 (805)
.|++-||||.+..|.||........ ..--|+|+|..|+- ..
T Consensus 34 ~~~k~~~~~~~~~~~~~~d~~A~~~-------------------------------------~~L~~~~~LR~C~~v~e~ 76 (593)
T KOG4807|consen 34 QWKKHWFVLTDSSLKYYRDSTAEEA-------------------------------------DELDGEIDLRSCTDVTEY 76 (593)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhc-------------------------------------ccCCccccHHHHHHHHHH
Confidence 4999999999999999996432110 01248899988762 22
Q ss_pred cCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 186 SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 186 ~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
+..-...|+|.+.+..|.|.|-+.--+..||.|++...
T Consensus 77 a~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~A~~kT~ 114 (593)
T KOG4807|consen 77 AVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEALRKTV 114 (593)
T ss_pred HHHhccceeecccchhhhhHHHHHHHHHHHHHHHHhcc
Confidence 33447899999999999999999999999999998543
No 88
>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]
Probab=80.87 E-value=1.1 Score=53.17 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=30.8
Q ss_pred CCcceEEEEEeec--CCC-CCceeeEEEEeCCeEEEEeecCC
Q 003664 91 VGNGISGVLYKWV--NYG-KGWRPRWFVLQDGVLSYYKIHGP 129 (805)
Q Consensus 91 ~~~~~~G~L~K~~--n~~-kgWk~RwFVL~dg~LsYYk~~~~ 129 (805)
...-++|||++.. +++ ..|++=||||.|..|+.|.++..
T Consensus 560 ~~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~ 601 (638)
T KOG1738|consen 560 GRGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRV 601 (638)
T ss_pred ccchhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhh
Confidence 3456789999864 232 35999999999999999998765
No 89
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=75.57 E-value=1.6 Score=48.99 Aligned_cols=98 Identities=22% Similarity=0.212 Sum_probs=57.0
Q ss_pred cceEEEEEeec--CCCCCceeeEEEEeCCeEEEEeecCCCccccchhh-hc---cccccccchhhhhhhcccccccchhc
Q 003664 93 NGISGVLYKWV--NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEET-ER---GCKVIGEESTRIISKRKHKKETTSQR 166 (805)
Q Consensus 93 ~~~~G~L~K~~--n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~-~~---~~~vig~~s~~~~~~~~~~~~~~~~~ 166 (805)
..--|||.++. +-.+.|++-+.+|.+.-|-.|.+-.-.+-.-..+. .+ .-|+++.++
T Consensus 292 vkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~----------------- 354 (506)
T KOG3551|consen 292 VKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGS----------------- 354 (506)
T ss_pred hhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCC-----------------
Confidence 33449999985 34456999999998777777776332110000000 00 001111110
Q ss_pred ccCCCcccEEEcCccEEEecCCCCCcEEEEeCCe----EEEEEcCCHHHHHHHHHHHHH
Q 003664 167 LLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTK----RLHLRAETREDRFAWMEALQA 221 (805)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~~~~d~~rF~I~t~~k----t~~LrAes~~dr~~WI~AL~~ 221 (805)
.+...+ ..-+..|...||++ ++.||+||..|...|..+|-.
T Consensus 355 ~~~s~~--------------~g~~lsFa~RtGTrqGV~thlfrvEThrdLa~WtRslVq 399 (506)
T KOG3551|consen 355 GKGSVI--------------KGLTLSFATRTGTRQGVETHLFRVETHRELAAWTRSLVQ 399 (506)
T ss_pred CCCCCc--------------CCceEEEEEecccccceEEEEEEeccHHHHHHHHHHHHH
Confidence 001011 11135699999875 799999999999999987743
No 90
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=75.32 E-value=3.9 Score=48.12 Aligned_cols=91 Identities=21% Similarity=0.192 Sum_probs=62.2
Q ss_pred CcceEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCC
Q 003664 92 GNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (805)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL-~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~ 170 (805)
...+.|+|.|+...+ =|+|.|+| ..+.|.|+.....
T Consensus 450 ~i~k~~~l~k~~~lf--~rkr~lllTn~~rll~~~~~~~----------------------------------------- 486 (604)
T KOG0592|consen 450 LILKEGALEKRQGLF--ARKRMLLLTNGPRLLYVDPQNL----------------------------------------- 486 (604)
T ss_pred hHHhHHHHHhhhhhh--hceeEEEecCCCeEEEEecccc-----------------------------------------
Confidence 345667777764444 36799999 6788888883221
Q ss_pred CcccEEEcCccEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003664 171 KPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (805)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~~ 227 (805)
..+|+|.++.+. +........|.|.|+.|+|+|-- =......|-.||..++...+
T Consensus 487 ~lk~eip~~~~~-~~e~~n~~~~~i~TP~k~~~l~d-~~~~as~w~~ai~~~~~~~~ 541 (604)
T KOG0592|consen 487 VLKGEIPWSPDL-RVELKNSSTFFIHTPNKVYYLED-PEQRASVWCKAIETVRKRYS 541 (604)
T ss_pred eeccccccCccc-ceeeccCcceEEECCccceeccC-cccchhHHHHhhhhhhhccc
Confidence 135777777643 33334467899999999999854 33556789999999965544
No 91
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=74.16 E-value=0.17 Score=60.60 Aligned_cols=90 Identities=16% Similarity=0.292 Sum_probs=67.2
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCe-EEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcc
Q 003664 95 ISGVLYKWVNYGKGWRPRWFVLQDGV-LSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (805)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~dg~-LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~ 173 (805)
..|-+.+..|-...|+.|+|.+++.+ +.|-|.... .-.
T Consensus 4 ~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~g-----------------------------------------~~~ 42 (1099)
T KOG1170|consen 4 TRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTASG-----------------------------------------PLF 42 (1099)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHhccCC-----------------------------------------ccH
Confidence 45777777777788999999998877 444443211 123
Q ss_pred cEEEcCccEEEecCCC--CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 174 GEVHLKVSSIRDSKSD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 174 G~I~L~~ssi~~~~~d--~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
-.+.|..+.+.++... ...|+|+|+-|+..++|++..++..||.|++..+..
T Consensus 43 ~~~d~t~a~~~eSs~~n~~~sf~vi~~~rk~r~~adn~ke~e~wi~~~kt~q~~ 96 (1099)
T KOG1170|consen 43 ALLDLTSAHVAESSTNNPRPSFCVITPVRKHRLCADNRKEMEKWINQSKTPQHL 96 (1099)
T ss_pred HHHhcccccccccccCCCCCCeeEecccHHhhhhccchhHHHHhhccccchhhc
Confidence 4456666666665444 567999999999999999999999999999988764
No 92
>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=68.04 E-value=6 Score=50.25 Aligned_cols=58 Identities=21% Similarity=0.405 Sum_probs=47.8
Q ss_pred cccEEEcCccEEEecCCCCCcEEEEe-C---CeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 003664 172 PFGEVHLKVSSIRDSKSDDKRFSIFT-G---TKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (805)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~rF~I~t-~---~kt~~LrAes~~dr~~WI~AL~~a~~~~~~~ 229 (805)
-.++|.|..-.|++...|.+.|.|++ . -..|.|.|.|.+||..||+-|+.++...++-
T Consensus 666 ~spVisL~~livRevAtd~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~~~ 727 (1167)
T KOG3520|consen 666 KSPVISLQKLIVREVATDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCPRN 727 (1167)
T ss_pred CCCceehHHHHHHHHhccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCCcc
Confidence 35788888777777788877777554 3 3679999999999999999999999998874
No 93
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=64.87 E-value=7.6 Score=37.86 Aligned_cols=24 Identities=21% Similarity=0.430 Sum_probs=19.9
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHH
Q 003664 200 KRLHLRAETREDRFAWMEALQAVK 223 (805)
Q Consensus 200 kt~~LrAes~~dr~~WI~AL~~a~ 223 (805)
..|.|.|+|..+|++|+++|..++
T Consensus 112 ~~~TLyA~s~~~R~~W~e~I~~qq 135 (135)
T PF15405_consen 112 YSYTLYASSAQARQKWLEKIEEQQ 135 (135)
T ss_dssp EEEEEE-SSHHHHHHHHHHHHHH-
T ss_pred eEEEEEeCCHHHHHHHHHHHHhcC
Confidence 358999999999999999998763
No 94
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=59.56 E-value=44 Score=31.19 Aligned_cols=37 Identities=8% Similarity=0.199 Sum_probs=30.2
Q ss_pred cCCCCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHH
Q 003664 186 SKSDDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 186 ~~~d~~rF~I~t~~k-t~~LrAes~~dr~~WI~AL~~a 222 (805)
-.+..+.|.+...+. .|.|.|.+.+++..|+..|+.+
T Consensus 70 mPD~~nTFvLK~~~~~eyI~Ea~d~~q~~SWla~Ir~C 107 (107)
T cd01231 70 MPDNLYTFVLKVDDNTDIIFEVGDEQQLNSWLAELRYC 107 (107)
T ss_pred ccCcccEEEEEecCCceEEEEcCCHHHHHHHHHHHhcC
Confidence 345578899877554 5999999999999999999854
No 95
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=48.59 E-value=11 Score=46.38 Aligned_cols=98 Identities=28% Similarity=0.376 Sum_probs=70.4
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCc
Q 003664 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (805)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p 172 (805)
-+.+|-|.|-. .||-|+|-|-|=..+|-|-. ++.+ + .+..+.
T Consensus 750 ~ir~g~llK~s--kkgLqqrmfFLfsdillyts-k~~~---~--------------------------------~~~fri 791 (1036)
T KOG3531|consen 750 FIRSGCLLKLS--KKGLQQRMFFLFSDILLYTS-KGPD---V--------------------------------QKCFRI 791 (1036)
T ss_pred hhhcCCchhhc--cccchhhhhhhhhhhheecc-CCCC---h--------------------------------hheeEe
Confidence 46778888854 46789998888666666533 3321 0 112235
Q ss_pred ccEEEcCccEEEecCC---CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 003664 173 FGEVHLKVSSIRDSKS---DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (805)
Q Consensus 173 ~G~I~L~~ssi~~~~~---d~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~~~~~ 229 (805)
.|.|.|. -++..+.. -++.|.|+++.+..+..|.+..+...|+..++.+++..++.
T Consensus 792 ~g~lP~~-l~~en~en~~s~p~~~ti~~~qk~i~vsast~~~sk~~~~~r~~~i~~~~k~ 850 (1036)
T KOG3531|consen 792 NGDLPLT-LTMENSENEWSVPHCFTISGAQKQIYVSASTRRESKKWEFDRRKAIDLAPKK 850 (1036)
T ss_pred ccCCceE-eeeecccccccCCceEEEeccceEEEEeccchhhhhhhhhccchhhhhcccc
Confidence 6777776 44443322 16899999999999999999999999999999999887764
No 96
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=46.17 E-value=65 Score=38.39 Aligned_cols=38 Identities=21% Similarity=0.299 Sum_probs=27.9
Q ss_pred ecCCCCCcEEEEeCCeEEEEEcCC------------HHHHHHHHHHHHHHH
Q 003664 185 DSKSDDKRFSIFTGTKRLHLRAET------------REDRFAWMEALQAVK 223 (805)
Q Consensus 185 ~~~~d~~rF~I~t~~kt~~LrAes------------~~dr~~WI~AL~~a~ 223 (805)
.....+..|.|.|++-+|++ .++ .+-.+.|-.||+.|.
T Consensus 474 p~~~~phcFEI~T~~~vyfV-ge~p~~~~~~~~g~g~d~a~~w~~ai~~al 523 (888)
T KOG4236|consen 474 PAGTNPHCFEIRTATTVYFV-GENPSSTPGGESGVGLDAAQGWETAIQQAL 523 (888)
T ss_pred CCCCCCceEEEEeeeEEEEe-cCCCCCCccccccccchhhccCchhhhhcc
Confidence 34556899999999955554 555 445888999998763
No 97
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=42.94 E-value=40 Score=31.93 Aligned_cols=34 Identities=12% Similarity=0.380 Sum_probs=29.4
Q ss_pred CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003664 191 KRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (805)
Q Consensus 191 ~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~ 224 (805)
+-|-|.|..+...|.|+|..+.+.|+++|+.-..
T Consensus 71 ~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~ 104 (110)
T PF08458_consen 71 RYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLS 104 (110)
T ss_pred EEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHH
Confidence 3466899999999999999999999999987644
No 98
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=40.21 E-value=21 Score=42.35 Aligned_cols=93 Identities=19% Similarity=0.139 Sum_probs=59.4
Q ss_pred cceEEEEEeecCCCCCceeeEEEE---eCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccC
Q 003664 93 NGISGVLYKWVNYGKGWRPRWFVL---QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (805)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL---~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~ 169 (805)
..+.+.|.+.-..+++|..-|++. ++-+++-|....+.
T Consensus 497 ~~~~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~qDv--------------------------------------- 537 (623)
T KOG4424|consen 497 NVICSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSPQDV--------------------------------------- 537 (623)
T ss_pred ceehhhHHHHhhcCccceeeeeeccCCCCccccccCCcccc---------------------------------------
Confidence 444455544433678899999999 56777777765541
Q ss_pred CCcccEEEcCccEEEec--C--CC-CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 170 RKPFGEVHLKVSSIRDS--K--SD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 170 ~~p~G~I~L~~ssi~~~--~--~d-~~rF~I~t~~kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
.....|.|..+.+... . .| ...|.++.....+||.|+|++-++.|++.|..|..-
T Consensus 538 -~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~~~a~~~q~qq~wl~~l~~A~~~ 597 (623)
T KOG4424|consen 538 -RAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSWHLAADDEQLQQRWLEVLLLAVSG 597 (623)
T ss_pred -ccccccccCccccCCCcccccchhcchhhhhhhcceeeeccCCHHHHHHHHHHHHhhhcc
Confidence 1224555555544311 1 11 122334444568999999999999999999988653
No 99
>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]
Probab=39.63 E-value=44 Score=39.98 Aligned_cols=20 Identities=45% Similarity=0.775 Sum_probs=19.0
Q ss_pred EEEEEcCCHHHHHHHHHHHH
Q 003664 201 RLHLRAETREDRFAWMEALQ 220 (805)
Q Consensus 201 t~~LrAes~~dr~~WI~AL~ 220 (805)
.|.|+|+|..||++||.||.
T Consensus 572 e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 572 ELLLSAESQSDRQRWISALR 591 (695)
T ss_pred eeeecCCchHHHHHHHHhcC
Confidence 49999999999999999998
No 100
>PF14254 DUF4348: Domain of unknown function (DUF4348); PDB: 3SBU_A.
Probab=36.21 E-value=44 Score=36.26 Aligned_cols=40 Identities=23% Similarity=0.414 Sum_probs=25.1
Q ss_pred ccceeeeeeccceeeEeeceeE-EEEe-CCcceEEEEEeecc
Q 003664 588 KVTSSIYNLILGKLYCDHYGTM-RIEG-NREYSCKLKFKEQS 627 (805)
Q Consensus 588 ~pt~~v~nii~G~~~~e~~G~~-~I~~-~tg~~~~i~F~~k~ 627 (805)
.|...|+||+.|+.|.+-..++ .|+| .+|+..+|.|+.++
T Consensus 225 lP~~~i~NI~YGQky~~s~~KIl~~rGi~NG~e~~l~Fk~~~ 266 (273)
T PF14254_consen 225 LPKGKIYNINYGQKYTESNQKILVFRGIANGLETELYFKKRG 266 (273)
T ss_dssp --SSEEEEEESS----T-SEEEEEEEESSS--EEEEEEEEET
T ss_pred CCccceeeeecccccCCCCceEEEEEeecCceeEEEEEEEcC
Confidence 4888999999999999955554 4567 68999999999763
No 101
>PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a family of proteins which appears to have a highly conserved zinc finger domain at the C-terminal end, described as -C-X2-CH-X3-H-X5-C-X2-C-. The structure is predicted to contain a coiled coil. Members of this family are annotated as being tumour-associated antigen HCA127 in humans, but this could not be confirmed.
Probab=32.13 E-value=1.1e+02 Score=32.76 Aligned_cols=27 Identities=22% Similarity=0.222 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003664 276 LQSQLLLLKQKQWLLIDTLRQLETEKV 302 (805)
Q Consensus 276 l~~ql~~lk~~~~~lld~L~~Le~~k~ 302 (805)
.-++|.+.++++..|-+.+++++.++.
T Consensus 51 h~eeLrqI~~DIn~lE~iIkqa~~er~ 77 (230)
T PF10146_consen 51 HVEELRQINQDINTLENIIKQAESERN 77 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555555555554444455544433
No 102
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=30.28 E-value=46 Score=37.85 Aligned_cols=54 Identities=20% Similarity=0.389 Sum_probs=42.2
Q ss_pred cccEEEcCccEEEec----CCCCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 172 PFGEVHLKVSSIRDS----KSDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 172 p~G~I~L~~ssi~~~----~~d~~rF~I~t~~--kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
-+..|.|+-|.+... +..++.|.|.+++ .++.|||.+..+...|.+||.++...
T Consensus 214 d~k~IpLKm~yvaR~~~~~DpEnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~~ 273 (506)
T KOG3551|consen 214 DRKTIPLKMAYVARNLIDADPENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVNT 273 (506)
T ss_pred cccccchhhHHHHhhCCCCCcccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHhh
Confidence 356788988765322 2336778999975 47999999999999999999998654
No 103
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=30.15 E-value=2.6e+02 Score=27.87 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=25.1
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003664 198 GTKRLHLRAETREDRFAWMEALQAVKDM 225 (805)
Q Consensus 198 ~~kt~~LrAes~~dr~~WI~AL~~a~~~ 225 (805)
+.++|+|++.+++-+...|..+++....
T Consensus 129 pE~vfqLCcS~~E~k~~flK~Irsilre 156 (160)
T cd01255 129 PEKVFVLCCSTAESRNAFLKTIRSILRE 156 (160)
T ss_pred CcceEEEecCCHHHHHHHHHHHHHHHHH
Confidence 5689999999999999999999988654
No 104
>KOG3003 consensus Molecular chaperone of the GrpE family [Posttranslational modification, protein turnover, chaperones]
Probab=28.64 E-value=1.2e+02 Score=32.45 Aligned_cols=40 Identities=23% Similarity=0.359 Sum_probs=30.0
Q ss_pred CcCCCCCCCCCC-eEEEEeCCCCEEEEEEecccCCccceeEEecCcEEEEEEe
Q 003664 504 RICKPFNPLLGE-TYEADYPDKGLQFFSEKVSHHPMIVACHCQGTGWKFWGDS 555 (805)
Q Consensus 504 r~~KPfNPiLGE-Tfe~~~~d~g~rfiaEQVSHHPPisA~~~e~~g~~~~g~~ 555 (805)
-...||+|-+=| +|++ |+ .--||=+.+||...||+++|-.
T Consensus 181 PigekFDPn~HEAvfq~--p~----------~~k~pgtV~~v~k~Gy~L~~R~ 221 (236)
T KOG3003|consen 181 PIGEKFDPNEHEAVFQV--PD----------AAKEPGTVALVTKKGYKLNGRV 221 (236)
T ss_pred CCCCCCCcchhheeEec--cc----------cCCCCCeEEEEeccCcccCCee
Confidence 467999998877 4444 33 2268888999999999998753
No 105
>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]
Probab=26.37 E-value=91 Score=36.60 Aligned_cols=79 Identities=18% Similarity=0.260 Sum_probs=50.2
Q ss_pred CCceeeEEEEeCCeEEEEeecCCCccccchhhhccccccccchhhhhhhcccccccchhcccCCCcccEEEcCccEEEec
Q 003664 107 KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDS 186 (805)
Q Consensus 107 kgWk~RwFVL~dg~LsYYk~~~~~~i~~~~~~~~~~~vig~~s~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~~ 186 (805)
..=+.|||+|=..+|.++....+. +-.| -.|.+.+.+-.|+.-
T Consensus 323 ad~~dRy~~LF~~~llflsvs~rM-----------s~fI--------------------------yegKlp~tG~iV~kl 365 (661)
T KOG2070|consen 323 ADEKDRYLLLFPNVLLFLSVSPRM-----------SGFI--------------------------YEGKLPTTGMIVTKL 365 (661)
T ss_pred cchhhheeeeccceeeeeEecccc-----------chhh--------------------------hccccccceeEEeeh
Confidence 346799999977777777653321 1111 124455555444321
Q ss_pred -CC--CCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHH
Q 003664 187 -KS--DDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAV 222 (805)
Q Consensus 187 -~~--d~~rF~I~t~~k-t~~LrAes~~dr~~WI~AL~~a 222 (805)
+. ..++|.|...+= .....++...|.++|+++|+..
T Consensus 366 Edte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ln~~ 405 (661)
T KOG2070|consen 366 EDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEHLNKQ 405 (661)
T ss_pred hhhhcccccccccccchhheeeccCChHHHHHHHHHhhhc
Confidence 11 267888866653 3667799999999999999863
No 106
>PF10504 DUF2452: Protein of unknown function (DUF2452); InterPro: IPR019534 This entry contains proteins that have no known function.
Probab=24.79 E-value=61 Score=32.61 Aligned_cols=24 Identities=25% Similarity=0.559 Sum_probs=18.5
Q ss_pred CCCCCCCCCeEEEEeCCCCEEEEE
Q 003664 507 KPFNPLLGETYEADYPDKGLQFFS 530 (805)
Q Consensus 507 KPfNPiLGETfe~~~~d~g~rfia 530 (805)
==|.|+.|+||.+...+.|..|++
T Consensus 86 cnF~pipG~iYhLY~r~~G~~ylS 109 (159)
T PF10504_consen 86 CNFEPIPGQIYHLYRRENGQDYLS 109 (159)
T ss_pred cCceecCCCEEEEEECCCCCEEEE
Confidence 348999999999987666766543
No 107
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=20.15 E-value=30 Score=38.85 Aligned_cols=24 Identities=25% Similarity=0.307 Sum_probs=18.3
Q ss_pred cceEEEEEeecC-----CC-CCceeeEEEE
Q 003664 93 NGISGVLYKWVN-----YG-KGWRPRWFVL 116 (805)
Q Consensus 93 ~~~~G~L~K~~n-----~~-kgWk~RwFVL 116 (805)
..++|+++|+.. .. .+||+|||.|
T Consensus 303 ~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l 332 (333)
T cd05135 303 TVKEGYLHKRKTEGPQLLTRFAFKKRYFWL 332 (333)
T ss_pred hhhhhHhhhccccCCCCcccccccceeeec
Confidence 467899999852 12 3699999987
Done!