Citrus Sinensis ID: 003664

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-----

MHPFCCISAVSDHNPSPHNPFADNLFTMPPPPSANVTASTRPDPPVRFTTVQANHHHHNHSNGNNGNNNNHTEPRLSQRAEPVDVKINDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPRMSNSELMAPMDSIQVSTEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDLENTVVDESQRQLIDQDASSTLRQDKFSEGTTESDDDNERVDGVEDETDEDENTFFDTRDFLSSSSLRSNGSDFRSSSFSSDEESLQIVESENDIDASIRFVGTNYPYIKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLQFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLWKRSKPPKYPTRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQENGWKPRWFAKDRATGTYRYIGGYWEARETGDWNLCPDIFGHIPSDQMLD

ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccccCEEEEEEEccEEEEEEEccccccccccHHcccccccccccEEEEHHcccccccccccccccccccccccccccccccccccccEEEEcccEEEccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccCEEEECccccCEEEEEcccccccEEEEEECccccEEEEEcccccccccCEEEEEEcEEEEEEcccccEEEEEEcEEEEEEEEEcEEEEECcccEEEEEcccCEEEEEEEEcccccccccEEEEEEEcccccEEEEEEEEEccccEEEEccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccccccEEEccccHHHccccccccccccccccccccccc

MHPFCCIS****************************************************************************VKINDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISK********SQRLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPRMSNSE*M************************************EFAPLQSQLLLLKQKQWLLIDTLRQLETEKVDL********************************************************************************************************YPYIKRRKKL***VEKEKGVSLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLQFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLWKRSKPPKYPTRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQENGWKPRWFAKDRATGTYRYIGGYWEARETGDWNLCPDIFGHIP******

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MHPFCCISAVSDHNPSPHNPFADNLFTMPPPPSANVTASTRPDPPVRFTTVQANHHHHNHSNGNNGNNNNHTEPRLSQRAEPVDVKINDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPRMSNSELMAPMDSIQVSTEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTxxxxxxxxxxxxxxxxxxxxxQLIDQDASSTLRQDKFSEGTTESDDDNERVDGVEDETDEDENTFFDTRDFLSSSSLRSNGSDFRSSSFSSDEESLQIVESENDIDASIRFVGTNYPYIKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLQFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLWKRSKPPKYPTRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGExxxxxxxxxxxxxxxxxxxxxxxxGWKPRWFAKDRATGTYRYIGGYWEARETGDWNLCPDIFGHIPSDQMLD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Oxysterol-binding protein-related protein 1C	May be involved in the transport of sterols.	confident	Q8L751
Oxysterol-binding protein-related protein 1A	May be involved in the transport of sterols.	probable	O80866

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1ZHX, chain A
Confidence level:confident
Coverage over the Query: 420-661,683-788
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Template: 2D9X, chain A
Confidence level:confident
Coverage over the Query: 95-125,164-237
View the alignment between query and template
View the model in PyMOL

Template: 2D9V, chain A
Confidence level:probable
Coverage over the Query: 96-164,184-237
View the alignment between query and template
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Template: 3TFM, chain A
Confidence level:probable
Coverage over the Query: 74-125,158-228
View the alignment between query and template
View the model in PyMOL

Template: 1X1F, chain A
Confidence level:probable
Coverage over the Query: 97-128,169-254
View the alignment between query and template
View the model in PyMOL

Template: 3A8N, chain A
Confidence level:probable
Coverage over the Query: 107-125,157-316
View the alignment between query and template
View the model in PyMOL