BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003669
(804 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 315 bits (808), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 185/422 (43%), Positives = 248/422 (58%), Gaps = 31/422 (7%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
AM F KS ARV+ +E V F DVAG+ + +LEL E+V F + + +
Sbjct: 140 AMNFGKSKARVQ----------MEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTEL 189
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G +IP G+LL GPPG GKTLLAKAVAGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 190 GAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQA 249
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I +A+TNRP
Sbjct: 250 KANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRP 309
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LD AL+RPGRFDR++ + +P GR EIL VHAR K ++ DVD +A T G GA+
Sbjct: 310 DVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGAD 369
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAV 685
L+N++ AAI R TEI+ D++ A G + SE + VA +EA A+
Sbjct: 370 LSNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEKKNRVMSEKRKTLVAYHEAGHAL 429
Query: 686 VAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 745
V PD ++ ++I PR GR G + + G+ SR L + + V L R A+
Sbjct: 430 VGALMPDYDPVQKISIIPR-GRAGGLTWFTPSEDRMESGLYSRSYLQNQMAVALGGRIAE 488
Query: 746 ELWCGEGQVRKTLQHPLLFV-----------------GNVKLARRGTGILMM--LCADSD 786
E+ GE +V + L V G V L R+G G+ + + +D D
Sbjct: 489 EIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRD 548
Query: 787 VS 788
S
Sbjct: 549 FS 550
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 312 bits (799), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 178/377 (47%), Positives = 237/377 (62%), Gaps = 16/377 (4%)
Query: 380 QNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTH 439
QN A+ F KS ARV+ +E + F+DVAG+ + +LEL E+V F +
Sbjct: 141 QNGPGSQALNFGKSRARVQ----------MEPKTQITFNDVAGIDQAKLELAEVVDFLKN 190
Query: 440 GEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRV 499
E + G +IP G+LL GPPG GKTLLA+AVAGEAGV FFSIS S+FVE++VGVGASRV
Sbjct: 191 SERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVEMFVGVGASRV 250
Query: 500 RSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVIT 559
R L+++AK NAP +VFIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I
Sbjct: 251 RDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIV 310
Query: 560 IASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMT 619
IA+TNRPD+LD AL+RPGRFDR++ + +P GR+EILKVHAR K ++ DVD +A T
Sbjct: 311 IAATNRPDVLDAALLRPGRFDRQVTVDRPDFQGRLEILKVHARGKTLSADVDLEKLARRT 370
Query: 620 DGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAI 678
G GA+LAN++ AAI R TEI+ D++ A G + SE ++ VA
Sbjct: 371 PGFTGADLANLLNEAAILAARRNLTEISMDEINDAVDRVLAGPEKKDRLMSERRKELVAY 430
Query: 679 NEAAMAVVAVNFPDLKNIEFVTIAPRA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITV 737
+EA A+V P+ I+ VTI PR L + D M G+ +R L + +TV
Sbjct: 431 HEAGHALVGSLLPNYDPIQKVTIIPRGQAGGLTWFMPSDDDM----GLTTRAHLKNMMTV 486
Query: 738 QLAPRAADELWCGEGQV 754
L R A+E+ GE ++
Sbjct: 487 ALGGRVAEEVVYGESEI 503
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/339 (49%), Positives = 222/339 (65%), Gaps = 6/339 (1%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F DVAG+ +++ EL EIV F H + Y G RIP G+LL GPPG GKTLLAKAVAGE
Sbjct: 154 VTFDDVAGIDEVKEELAEIVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGE 213
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFSIS S FVE++VGVGASRVR L+++AK N+P +VFIDE+DAVGR+RG G G
Sbjct: 214 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGAGYGGGH 273
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGF +I IA+TNRPD+LDPAL+RPGRFDR+I I +P L GR+
Sbjct: 274 DEREQTLNQLLVEMDGFSANEGIIIIAATNRPDVLDPALLRPGRFDRQIVIDRPDLKGRL 333
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
I +VHA+ KP+ DVD +A T G GA++AN++ AA+ R + +I+ D+ A
Sbjct: 334 AIFQVHAKGKPLEPDVDLEVLAKRTPGFTGADIANLMNEAALLAARRRKKKISMQDVEDA 393
Query: 655 AQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 712
G ++K R S + R A +EA AVV P + + +TI PR GR +GY
Sbjct: 394 IDRVLAGGPEKKSRVISEKEKRVTAYHEAGHAVVGHMLPHMDPLHKITIIPR-GRAMGYT 452
Query: 713 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 751
++ +S+ +LD +T+ L RAA+E+ GE
Sbjct: 453 LFLPVEDRYN---ISKSEILDRMTMALGGRAAEEITFGE 488
>sp|C7N1I1|FTSH_SLAHD ATP-dependent zinc metalloprotease FtsH OS=Slackia
heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC
11029 / RHS 1) GN=ftsH PE=3 SV=1
Length = 783
Score = 309 bits (791), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 166/342 (48%), Positives = 233/342 (68%), Gaps = 11/342 (3%)
Query: 414 DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAG 473
DV+FSDVAG + EL+EI F + Y++ G +IP G LL GPPG GKTLLA+AVAG
Sbjct: 281 DVRFSDVAGEDEAVEELQEIKDFLVNPGKYQKLGAKIPRGCLLVGPPGTGKTLLARAVAG 340
Query: 474 EAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSG 533
EA V FFSIS S+FVE++VGVGASRVR+L+++AK+ APS++FIDE+DAVGR+RG G G
Sbjct: 341 EANVPFFSISGSEFVEMFVGVGASRVRNLFEQAKEAAPSIIFIDEIDAVGRQRGTGLGGG 400
Query: 534 GQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
ER+ TLNQLLV +DGFE V+ IA+TNR D+LDPAL+RPGRFDR+I + P + GR
Sbjct: 401 HDEREQTLNQLLVEMDGFEKNDAVVLIAATNRVDVLDPALLRPGRFDRQIVVDGPDVKGR 460
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
++IL+VHA+ KP+ +DVD +A +T GM GA+L N++ AA+ R + +I D++ +
Sbjct: 461 VKILEVHAKNKPIGEDVDLERIAKLTSGMTGADLMNLMNEAALLTARRNKDKIGMDEVNE 520
Query: 654 AAQIEERGML--DRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
+ ER M +RK R + +T R +A +E+ A+V + + +TI PR G L
Sbjct: 521 SM---ERLMAGPERKTRVLNEKTRRTIAYHESGHALVGHMLENADPVHKITIVPR-GMAL 576
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 751
GY D KF ++SR ++LD + V + R A+E++CG+
Sbjct: 577 GYTMSIPDEDKF---LVSRSAMLDELAVFMGGRVAEEIFCGD 615
>sp|D4HA34|FTSH_PROAS ATP-dependent zinc metalloprotease FtsH OS=Propionibacterium acnes
(strain SK137) GN=ftsH PE=3 SV=1
Length = 717
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/338 (50%), Positives = 226/338 (66%), Gaps = 17/338 (5%)
Query: 417 FSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAG 476
F+DVAG + EL+EI +F ++R G +IP G+LL GPPG GKTLLA+AVAGEAG
Sbjct: 166 FADVAGCQEAIDELQEIREFLAEPAKFQRVGAKIPKGVLLYGPPGTGKTLLARAVAGEAG 225
Query: 477 VNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQE 536
V FFSIS S FVE++VGVGASRVR L+++AK+ AP+++FIDE+DAVGR RG G G E
Sbjct: 226 VPFFSISGSDFVEMFVGVGASRVRDLFEQAKEAAPAIIFIDEIDAVGRHRGAGMGGGHDE 285
Query: 537 RDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEI 596
R+ TLNQLLV +DGF+ G VI IA+TNRPD+LDPAL+RPGRFDR+I + P L GR++I
Sbjct: 286 REQTLNQLLVEMDGFDVHGGVILIAATNRPDVLDPALLRPGRFDRQIAVEAPDLDGRLKI 345
Query: 597 LKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAI-----NMMRDGRTEI--TTD 649
LKVHA KPMADDVD ++A T GM GA+LAN++ AA+ N+ G +E+ D
Sbjct: 346 LKVHAHGKPMADDVDLASIARRTPGMTGADLANVLNEAALLTARANLPVIGNSELDEAID 405
Query: 650 DLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGREL 709
++ Q + R ++++ ER A +E A+VA P ++ +TI PR GR L
Sbjct: 406 RVIAGPQKKTR-LMNQHER-----LVTAYHEGGHALVAAAMPGTDPVQKITILPR-GRAL 458
Query: 710 GYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
GY + D K+ + +R LLD + + RAA+EL
Sbjct: 459 GYTMVMPDSDKYSQ---TRSELLDSMAYMMGGRAAEEL 493
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/363 (46%), Positives = 230/363 (63%), Gaps = 5/363 (1%)
Query: 388 MQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
MQ M+ G ++GK + E G V F DVA +++ EL+E+V+F + + + R G
Sbjct: 133 MQRMQGGGSQMMSFGKSRARLSENGKKVTFEDVANYEEVKEELQEVVEFLKNPDKFTRMG 192
Query: 448 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
++P G+LL GPPG GKTLLA+AVAGEAGV FF IS S FVE++VGVGASRVR L+++ K
Sbjct: 193 AKVPKGVLLVGPPGTGKTLLARAVAGEAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGK 252
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
NAP ++FIDELDAVGR+RG G G ER+ TLNQLLV +DGFE +I +A+TNRPD
Sbjct: 253 KNAPCIIFIDELDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFEPNEGIIVMAATNRPD 312
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
+LDPAL+RPGRFDR++ + KP + GRM ILK+H R KP+ADDVD +A T G GA++
Sbjct: 313 VLDPALLRPGRFDRQVVVDKPDVKGRMGILKIHLRNKPVADDVDVEVLAKRTPGFTGADM 372
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVV 686
N+ AAI +R + +IT +D A G + + SE R+ VA +E A+V
Sbjct: 373 ENLANEAAILAVRRRKNKITMEDFDDAIDKVIAGPAKKSKVMSERERKLVAYHETGHALV 432
Query: 687 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 746
++I PR GR G M+ K + +S+Q LLD ITV L RA++
Sbjct: 433 GDLLEHADRTHKISIVPR-GRAGG---MRWALPKEDKNFMSKQELLDQITVLLGGRASES 488
Query: 747 LWC 749
++
Sbjct: 489 IFL 491
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 303 bits (775), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 163/338 (48%), Positives = 226/338 (66%), Gaps = 9/338 (2%)
Query: 413 VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVA 472
+ V+FSDVAG + + EL E+V+F + + + G RIP G+LL GPPG GKTLLAKAVA
Sbjct: 182 IKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVA 241
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
GEAGV FFSIS S FVE++VGVGASRVRSL+++AK AP+++FIDE+DAVGR+RG+ G
Sbjct: 242 GEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGG 301
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER+ TLNQLL+ +DGFEG +I IA+TNR D+LDPAL+RPGRFDRK+ + +P + G
Sbjct: 302 GNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKG 361
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R ILKVHA+ KP+A+DVD VA T G VGA+L N++ AA+ R ++ I D+
Sbjct: 362 REAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDID 421
Query: 653 QAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 711
+A G + + S+ R+ VA +EA +V + + + + VTI PR GR GY
Sbjct: 422 EAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPR-GRAGGY 480
Query: 712 VRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
+ K D M +LS++ + + + + R A+E+
Sbjct: 481 MIALPKEDQM-----LLSKEDMKEQLAGLMGGRVAEEI 513
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 303 bits (775), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 163/338 (48%), Positives = 226/338 (66%), Gaps = 9/338 (2%)
Query: 413 VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVA 472
+ V+FSDVAG + + EL E+V+F + + + G RIP G+LL GPPG GKTLLAKAVA
Sbjct: 182 IKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVA 241
Query: 473 GEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGS 532
GEAGV FFSIS S FVE++VGVGASRVRSL+++AK AP+++FIDE+DAVGR+RG+ G
Sbjct: 242 GEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGG 301
Query: 533 GGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 592
G ER+ TLNQLL+ +DGFEG +I IA+TNR D+LDPAL+RPGRFDRK+ + +P + G
Sbjct: 302 GNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKG 361
Query: 593 RMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLL 652
R ILKVHA+ KP+A+DVD VA T G VGA+L N++ AA+ R ++ I D+
Sbjct: 362 REAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDID 421
Query: 653 QAAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 711
+A G + + S+ R+ VA +EA +V + + + + VTI PR GR GY
Sbjct: 422 EAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPR-GRAGGY 480
Query: 712 VRM--KMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
+ K D M +LS++ + + + + R A+E+
Sbjct: 481 MIALPKEDQM-----LLSKEDMKEQLAGLMGGRVAEEI 513
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 303 bits (775), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 170/367 (46%), Positives = 239/367 (65%), Gaps = 7/367 (1%)
Query: 388 MQFMKSGARVRRAYGKG-LPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
M+ M G + + GK + + E+ + + F DVAG+ + + ELEEIV+F ++R
Sbjct: 156 MRRMGGGPQGVLSVGKARVKIFAEKEITITFDDVAGIDEAKGELEEIVQFLKDPGKFQRL 215
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G RIP G+LL G PG GKTLLAKAVAGEAGV FFS+S S+FVE++VGVGA+RVR L+ +A
Sbjct: 216 GGRIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSEFVEMFVGVGAARVRDLFGQA 275
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
KD+AP ++FIDELDA+G+ RGL G ER+ TLNQLLV +DGF+ R VI +A+TNRP
Sbjct: 276 KDHAPCIIFIDELDALGKARGLNPIGGHDEREQTLNQLLVEMDGFDPRSGVIIMAATNRP 335
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
+ILDPAL+RPGRFDR + I KP + GR IL+VH ++ + +VD +A MT G VGA+
Sbjct: 336 EILDPALLRPGRFDRHVAIDKPDIRGREAILRVHVKEVKLGSEVDLKKIAGMTPGFVGAD 395
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ--VAINEAAMA 684
LAN+V AA+ R R E+T D +AA G L++K R+ + VA +EA A
Sbjct: 396 LANLVNEAALVAARRDRDEVTMADFQEAAD-RIIGGLEKKNRAMNPKEKEIVAYHEAGHA 454
Query: 685 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 744
+VA+ P++ + V+I PR LGY + ++ +++R LLD + V L R +
Sbjct: 455 LVAMLLPNVDPVNKVSIIPRGIAALGYTQQLPTEDRY---LMTRNELLDRLQVLLGGRVS 511
Query: 745 DELWCGE 751
+E+ G+
Sbjct: 512 EEIIFGD 518
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 302 bits (773), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 229/368 (62%), Gaps = 14/368 (3%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
AM F KS AR + +E VKF DVAG+ + + EL+E+V F E +
Sbjct: 178 AMNFGKSRARFQ----------MEAKTGVKFDDVAGIEEAKEELQEVVTFLKQPERFTAV 227
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G RIP G+LL GPPG GKTLLAKA+AGEA V FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 228 GARIPKGVLLVGPPGTGKTLLAKAIAGEAAVPFFSISGSEFVEMFVGVGASRVRDLFKKA 287
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
KDNAP ++FIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 288 KDNAPCLIFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRP 347
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LD AL+RPGRFDR++ + P L GR+EIL+VH+R K + V A+A T G GA+
Sbjct: 348 DVLDSALLRPGRFDRQVIVDAPDLKGRLEILQVHSRNKKVDPSVSLEAIARRTPGFTGAD 407
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 686
LAN++ AAI R + IT ++ A GM S++ R +A +E +V
Sbjct: 408 LANLLNEAAILTARRRKEAITILEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHGLV 467
Query: 687 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 746
D ++ VT+ PR G+ G + ++G++SR L IT LA RAA+E
Sbjct: 468 GTLLKDHDPVQKVTLIPR-GQAQGLTWFTPNE---EQGLISRSQLKARITSTLAGRAAEE 523
Query: 747 LWCGEGQV 754
+ G+ +V
Sbjct: 524 IVFGKPEV 531
>sp|A8F7F7|FTSH_THELT ATP-dependent zinc metalloprotease FtsH OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=ftsH PE=3
SV=1
Length = 626
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/335 (49%), Positives = 218/335 (65%), Gaps = 6/335 (1%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F DVAG+ + EL+E V F + + G R+P GILL GPPG GKTLLA+AVAGE
Sbjct: 159 VTFKDVAGVDEAVEELKETVLFLKDPGRFSKIGARMPKGILLVGPPGTGKTLLARAVAGE 218
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
A V FF IS S FVE++VGVGA+RVR L+ +AK NAP +VFIDE+DAVGR RG G G
Sbjct: 219 ANVPFFHISGSDFVELFVGVGAARVRDLFNQAKANAPCIVFIDEIDAVGRHRGAGLGGGH 278
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGF+ R ++ +A+TNRPDILDPAL+RPGRFD+K+ + P + GR
Sbjct: 279 DEREQTLNQLLVEMDGFDVRQGIVVMAATNRPDILDPALLRPGRFDKKVVLDTPDVRGRE 338
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
EILK+HAR KP+A+DVD +A T G VGA+L N+V AA+ R+GR +I +D +A
Sbjct: 339 EILKIHARNKPIAEDVDIRVLAQRTTGFVGADLENLVNEAALLAARNGRDKIKMEDFEEA 398
Query: 655 AQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 712
G RK R S R VA +E A+V+ P+ + ++I PR R LGY
Sbjct: 399 IDRVIAGPA-RKSRVISPREKRIVAYHEVGHAIVSSLLPNADPVHRISIIPRGYRALGYT 457
Query: 713 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
++ ++++Q LLD IT L RAA+EL
Sbjct: 458 LQLPAEDRY---LVTKQELLDQITGLLGGRAAEEL 489
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/372 (44%), Positives = 232/372 (62%), Gaps = 18/372 (4%)
Query: 388 MQFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
M+ M+ GA+ +GK + L E + F DVAG+ + + EL+E+V F ++R
Sbjct: 120 MRQMQGGAKGAMGFGKSKARLLTENKNRITFEDVAGVDEAKEELQEVVDFLKDPAKFQRL 179
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G +IP G LL GPPG GKTL+A+AVAGEAGV FF+IS S FVE++VGVGASRVR ++++A
Sbjct: 180 GGKIPKGALLVGPPGTGKTLIARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQA 239
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE +I IA+TNRP
Sbjct: 240 KKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRP 299
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LDPAL+RPGRFDR++ +P P + GR +I++VH + P+A DVD +A T G GA+
Sbjct: 300 DVLDPALLRPGRFDRQVVVPNPDVAGREKIIRVHMKNVPLAADVDVKTLARGTPGFSGAD 359
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS----SETWRQVAINEAA 682
LAN+V AA+ R R +T D QA +++ M+ + RS E + A +E
Sbjct: 360 LANLVNEAALMAARKNRRMVTMQDFEQA---KDKVMMGAERRSMAMNEEEKKLTAYHEGG 416
Query: 683 MAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEG---MLSRQSLLDHITVQL 739
A+VA+N P + TI PR GR LG V M+ EG + Q + + + +
Sbjct: 417 HAIVALNVPLADPVHKATIVPR-GRALGMV------MQLPEGDRYSMKYQQMTSRLAIMM 469
Query: 740 APRAADELWCGE 751
R A+E+ G+
Sbjct: 470 GGRVAEEIIFGK 481
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/339 (48%), Positives = 223/339 (65%), Gaps = 6/339 (1%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F DV G + EL+E+V+F + R G R+P GILL GPPG GKTLLA+AVAGE
Sbjct: 158 VTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGE 217
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
A V FF IS S FVE++VGVGA+RVR L+ +AK +AP +VFIDE+DAVGR RG G G
Sbjct: 218 ANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHRGAGLGGGH 277
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGF+ + +I +A+TNRPDILDPAL+RPGRFD+KI + P ++GR
Sbjct: 278 DEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRK 337
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+IL++H R KP+A+DV+ +A T G VGA+L N+V AA+ R+GR +IT D +A
Sbjct: 338 KILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEA 397
Query: 655 AQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 712
G RK + S + R +A +EA AVV+ P+ + + ++I PR + LGY
Sbjct: 398 IDRVIAGPA-RKSKLISPKEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYT 456
Query: 713 RMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 751
+ K+ ++SR LLD +T L RAA+E+ G+
Sbjct: 457 LHLPEEDKY---LVSRNELLDKLTALLGGRAAEEVVFGD 492
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 224/358 (62%), Gaps = 8/358 (2%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 247 VTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 306
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G
Sbjct: 307 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 366
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR+
Sbjct: 367 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 426
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+ILKVH+R K + DVDY VA T G GA+L N++ AAI R EI+ D++ A
Sbjct: 427 QILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDA 486
Query: 655 AQIEERGMLDRKER----SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
ER + +++ S E R VA +EA A+V P+ + ++I PR G+ G
Sbjct: 487 L---ERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGG 542
Query: 711 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQVRKTLQHPLLFVGNV 768
+ + G+ SR L + + V L R A+E+ G+ V + + V V
Sbjct: 543 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRV 600
>sp|Q10ZF7|FTSH_TRIEI ATP-dependent zinc metalloprotease FtsH OS=Trichodesmium erythraeum
(strain IMS101) GN=ftsH PE=3 SV=1
Length = 667
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/373 (45%), Positives = 231/373 (61%), Gaps = 20/373 (5%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
A+ F KS AR + +E V F DVAG+ + + EL+E+V F E +
Sbjct: 182 ALNFGKSRARFQ----------MEAKTGVLFEDVAGIEEAKEELQEVVSFLKKPEKFTAI 231
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 232 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 291
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K+NAP ++FIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 292 KENAPCIIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNSGIIIIAATNRP 351
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LD AL+RPGRFDR++ + P GR+ IL+VHAR K + ++ A+A T G GA+
Sbjct: 352 DVLDVALLRPGRFDRQVTVDLPAYKGRLGILEVHARNKKLTPEISLEAIARKTPGFSGAD 411
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERG-----MLDRKERSSETWRQVAINEA 681
LAN++ AAI R + IT +++ A G +LD K++ R +A +E
Sbjct: 412 LANMLNEAAILTARRRKEGITPNEIDDAIDRVTIGLSLTPLLDGKKK-----RLIAYHEL 466
Query: 682 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 741
A++ + + VTI PR+G G+ + MD GM +R L+D IT+ L
Sbjct: 467 GHALLMTLLKNSDLLNKVTIIPRSGGVGGFAQPIMDEGMIDSGMYTRGWLIDRITISLGG 526
Query: 742 RAADELWCGEGQV 754
RAA+E G +V
Sbjct: 527 RAAEEEIFGLAEV 539
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 295 bits (756), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 219/332 (65%), Gaps = 5/332 (1%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F+DVAG + EL EI +F + + +++ G RIP G LL GPPG GKTLLA+AVAGE
Sbjct: 186 VTFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLARAVAGE 245
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFSIS S FVE++VGVGASRVR L+++AK N+P ++F+DE+DAVGR+RG G G
Sbjct: 246 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGH 305
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGF+ + +I +A+TNRPDILDPAL+RPGRFDR+I + +P L GR+
Sbjct: 306 DEREQTLNQLLVEMDGFDSKSGIIMLAATNRPDILDPALLRPGRFDRQIVVDRPDLPGRI 365
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+ILKVH R KP+ +DVD +A T G GA+LAN+V AA+ R + +I ++ +A
Sbjct: 366 KILKVHTRGKPLGEDVDIETIARGTPGFTGADLANLVNEAALLAARHNKEQIEMAEMEEA 425
Query: 655 AQIEERGMLDRKERSSETWRQV-AINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 713
G + SE +++ A +EA A+V P+ + VTI PR G+ LG
Sbjct: 426 IDRVIAGPERKTRLISEKEKEITAYHEAGHAIVGALLPEADPVHKVTIIPR-GQALGVTM 484
Query: 714 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 745
+ +F M+SR L+ ++ L RAA+
Sbjct: 485 SLPEEDRF---MMSRAQLMAQLSYMLGGRAAE 513
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 295 bits (754), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/334 (50%), Positives = 216/334 (64%), Gaps = 5/334 (1%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F+DVAG + + EL+EIV+F + + + G RIP G+LL GPPG GKTLLAKAVAGE
Sbjct: 158 VTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAVAGE 217
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFSIS S FVE++VGVGA+RVR L+ +AK NAP +VFIDE+DAVGR+RG G G
Sbjct: 218 AGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAVGRQRGAGLGGGH 277
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGF +I IA+TNRPDILDPAL+RPGRFDR I + P + GR
Sbjct: 278 DEREQTLNQLLVEMDGFSVNEGIIVIAATNRPDILDPALLRPGRFDRHITVGIPDIKGRE 337
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
EILK+H+R KP+A DV +A T G GA+L N++ AA+ R G +IT +L +A
Sbjct: 338 EILKIHSRNKPLAPDVSLQVLARRTPGFTGADLENLMNEAALLAARRGLKQITMAELEEA 397
Query: 655 AQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 713
G R SE ++ VA +EA AVVA P+ + VTI PR GR GY
Sbjct: 398 ITRVIAGPEKRSRIMSEKDKKLVAYHEAGHAVVAKLLPNTPPVHEVTIIPR-GRAGGYTM 456
Query: 714 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
+ + K+ +S+ ++D I L R A+ L
Sbjct: 457 LLPEEDKY---YMSKSEMMDEIVHLLGGRVAESL 487
>sp|Q39102|FTSH1_ARATH ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716
Score = 295 bits (754), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 225/358 (62%), Gaps = 8/358 (2%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F+DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 259 VSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 318
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G
Sbjct: 319 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 378
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR+
Sbjct: 379 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 438
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+IL+VH+R K + DVD+ VA T G GA+L N++ AAI R EI+ D++ A
Sbjct: 439 KILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDA 498
Query: 655 AQIEERGMLDRKER----SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
ER + +++ S E R VA +EA A+V P+ + ++I PR G+ G
Sbjct: 499 L---ERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGG 554
Query: 711 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQVRKTLQHPLLFVGNV 768
+ + G+ SR L + + V L R A+E+ G+ V + + V V
Sbjct: 555 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRV 612
>sp|O82150|FTSH_TOBAC ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana
tabacum GN=FTSH PE=2 SV=2
Length = 714
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 225/358 (62%), Gaps = 8/358 (2%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F+DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 250 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 309
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G
Sbjct: 310 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 369
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR+
Sbjct: 370 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRI 429
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+IL+VH+R K + DVD+ +A T G GA+L N++ AAI R EI+ D++ A
Sbjct: 430 KILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDA 489
Query: 655 AQIEERGMLDRKER----SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
ER + +++ S E + VA +EA A+V P+ + ++I PR G+ G
Sbjct: 490 L---ERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGG 545
Query: 711 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQVRKTLQHPLLFVGNV 768
+ + G+ SR L + + V L R A+E+ G+ V + + V V
Sbjct: 546 LTFFAPSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRV 603
>sp|Q39444|FTSH_CAPAN ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment)
OS=Capsicum annuum GN=FTSH PE=2 SV=1
Length = 662
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/358 (44%), Positives = 224/358 (62%), Gaps = 8/358 (2%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F+DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 227 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 286
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFS +AS+FVE++VGVGASRVR L++ AK AP +VFIDE+DAVGR+RG G G
Sbjct: 287 AGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQRGAGLGGGN 346
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPG+FDR++ + +P + GR+
Sbjct: 347 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRV 406
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
IL+VH+R K +A DVD+ +A T G GA+L N++ AAI R EI+ D++ A
Sbjct: 407 RILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 466
Query: 655 AQIEERGMLDRKER----SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
ER + +++ S E + VA +EA A+V P+ + ++I PR G+ G
Sbjct: 467 L---ERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGG 522
Query: 711 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQVRKTLQHPLLFVGNV 768
+ + G+ SR L + + V L R A+E+ GE V + + V V
Sbjct: 523 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEDNVTTGASNDFMQVSRV 580
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 177/384 (46%), Positives = 233/384 (60%), Gaps = 9/384 (2%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F+DVAG + + EL ++V F + Y R G R+P G+LL GPPG GKTLLA+AVAGE
Sbjct: 248 VTFADVAGEEEAKAELAQVVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGE 307
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFS+SAS+FVE++VGVGASRVR L++ AK APS++FIDELDAVGR+R G G
Sbjct: 308 AGVPFFSVSASEFVEMFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQRFAGLGVGN 367
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGFE +V+ IA+TNRPD+LDPAL+RPGRFDR++ + P GR
Sbjct: 368 DEREQTLNQLLVEMDGFEAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVGLPDKRGRA 427
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
IL++H R P+A DVD +A+ T G GA+LAN+V AA+ R G+ + D +A
Sbjct: 428 AILRIHTRGIPIAPDVDLEGLAAATPGFSGADLANLVNEAALVAARRGKQVVDRSDFEEA 487
Query: 655 AQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRM 714
G S E R VA +EA AVVA P + ++I PR GR LG
Sbjct: 488 LDKMLLGTTRSLLMSQEERRLVAYHEAGHAVVAYFTPGADPLRKISIVPR-GRALGVTVQ 546
Query: 715 KMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQVRKTLQHPLLFVGNVKLARRG 774
+ +F +R LL + V L RAA++L E V Q+ L +LARR
Sbjct: 547 APEEDRFN---YTRNQLLGRLAVLLGGRAAEQLVFHE--VTTGAQNDLKEA--TQLARRM 599
Query: 775 TGILMMLCADSDVSL-LGYVYIFV 797
G+ M + L LG ++F+
Sbjct: 600 VGLWGMSEELGPIYLGLGEQHVFL 623
>sp|D3F124|FTSH1_CONWI ATP-dependent zinc metalloprotease FtsH 1 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH1 PE=3 SV=1
Length = 653
Score = 292 bits (747), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 165/345 (47%), Positives = 222/345 (64%), Gaps = 19/345 (5%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
+ F DVAG + EL EI +F + + ++ G RIP G+LL GPPG GKTLLA+AVAGE
Sbjct: 155 ITFRDVAGADEAVEELHEIKEFLENPKKFQALGARIPKGVLLYGPPGTGKTLLARAVAGE 214
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFSIS S FVE++VGVGASRVR L+++AK NAP ++F+DE+DAVGR RG G G
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNAPCIIFMDEIDAVGRHRGAGMGGGH 274
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGFE + N+I IA+TNRPDILDPAL+RPGRFDR++ + +P GR
Sbjct: 275 DEREQTLNQLLVEMDGFEAKDNIIMIAATNRPDILDPALLRPGRFDRQVTVDRPDRKGRS 334
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+IL+VH R KP+A ++D A+A T G GA+LAN+V AA+ R G+ EIT +L
Sbjct: 335 KILEVHTRGKPLAREIDIDALAGQTPGFTGADLANLVNEAALLAARTGKREITQVEL--- 391
Query: 655 AQIEERGML------DRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAG 706
E G++ ++K R SSE R A +E A+V + +++ R G
Sbjct: 392 ----EEGIMRVIAGPEKKTRVMSSEERRITAYHEMGHALVGHFLEHADPVHKISVIGR-G 446
Query: 707 RELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 751
+ LGY KF + +R +L D + + L RAA+E+ GE
Sbjct: 447 QALGYTISMPQEDKF---LTTRAALGDTMAMTLGGRAAEEIIFGE 488
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 292 bits (747), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 234/372 (62%), Gaps = 18/372 (4%)
Query: 388 MQFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
M+ M+ G+R +GK + L E V F DVAG+ + + +L+EIV F + ++R
Sbjct: 125 MRQMQGGSRGALGFGKSKAKLLTEAQGRVTFKDVAGVEEAKQDLQEIVDFLREPQKFQRL 184
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G RIP G+LL GPPG GKTLLA+++AGEA V FF+IS S FVE++VGVGASRVR ++++A
Sbjct: 185 GGRIPRGVLLVGPPGTGKTLLARSIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQA 244
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE ++I IA+TNRP
Sbjct: 245 KKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEPNESIILIAATNRP 304
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LDPAL+RPGRFDR++ +P P + GR +IL+VH R P+A +V+ +A T G GA+
Sbjct: 305 DVLDPALLRPGRFDRQVVVPNPDVAGREKILEVHVRNVPLAPNVNLRVLARGTPGFSGAD 364
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ----VAINEAA 682
L N+V AA+ + +T + A +++ M+ + RS+ ++ A +EA
Sbjct: 365 LMNLVNEAALMAASRNKKVVTMQEFEDA---KDKVMMGAERRSTAMTQEEKELTAYHEAG 421
Query: 683 MAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEG---MLSRQSLLDHITVQL 739
A+VA+N P + TI PR GR LG V M+ EG +S ++ + + +
Sbjct: 422 HAIVALNVPVSDPVHKATIVPR-GRALGMV------MQLPEGDRYSMSYLWMVSRLAIMM 474
Query: 740 APRAADELWCGE 751
R A+EL G+
Sbjct: 475 GGRVAEELKFGK 486
>sp|Q5Z974|FTSH1_ORYSJ ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH1 PE=2 SV=1
Length = 686
Score = 291 bits (746), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 225/358 (62%), Gaps = 8/358 (2%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 229 VTFVDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 288
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G
Sbjct: 289 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEIDAVGRQRGAGLGGGN 348
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR+
Sbjct: 349 DEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRV 408
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+IL+VH+R K +A DVD+ +A T G GA+L N++ AAI R EI+ D++ A
Sbjct: 409 KILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDA 468
Query: 655 AQIEERGMLDRKER----SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELG 710
ER + +++ S E R VA +EA A+V P+ + ++I PR G+ G
Sbjct: 469 L---ERIIAGPEKKNAVVSEEKRRLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGG 524
Query: 711 YVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQVRKTLQHPLLFVGNV 768
+ + G+ SR L + + V L R A+E+ G+ V + + V V
Sbjct: 525 LTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSRV 582
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/337 (46%), Positives = 219/337 (64%), Gaps = 5/337 (1%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F DVAG+ + + EL EIV F + + Y+R G IP G+LL GPPG GKTLLA+AVAGE
Sbjct: 194 VTFDDVAGIEEAKQELAEIVDFLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAVAGE 253
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FFS+S S+FVE+ VGVGA+RVR L+Q+AK AP ++F+DELDA+GR RG GG
Sbjct: 254 AGVPFFSMSGSEFVEMIVGVGAARVRELFQQAKKEAPCIIFVDELDAIGRRRGSSINVGG 313
Query: 535 Q-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
ER+ TLNQLLV +DGF+ R VI +A+TNRPD+LDPAL+RPGRFDR++ + +P +GR
Sbjct: 314 HDEREQTLNQLLVEMDGFDSRQGVIVLAATNRPDVLDPALLRPGRFDRRVVVQRPDKVGR 373
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
++IL+VH R P+ ++D +A+ T G+VGA+L N+V AA+ R G+ + +D
Sbjct: 374 LKILQVHTRNVPLDPNLDLSEIAAATPGLVGADLRNLVNEAALLAARRGKNYVDREDFFD 433
Query: 654 AAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 713
A + G + S E R+VA +E+ A++ + P+ + VTI PR G+ LG
Sbjct: 434 ALEKITLGAERKLLISEEDRRRVAYHESGHALLGLLLPEADPVHKVTIIPR-GQALGVTY 492
Query: 714 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCG 750
+ ++ + + L IT L RAA+EL G
Sbjct: 493 QTPEDDRYN---YTERYLRSRITAALGGRAAEELVFG 526
>sp|D1BLD0|FTSH_VEIPT ATP-dependent zinc metalloprotease FtsH OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=ftsH
PE=3 SV=1
Length = 642
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/366 (47%), Positives = 228/366 (62%), Gaps = 9/366 (2%)
Query: 389 QFMKSGARVRRAYGKGLPQYLERG-VDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G RV +GK + + G V V F DVAG + + ELEE+V+F + G
Sbjct: 125 QTQGGGGRVMN-FGKSRAKLMGEGNVKVSFKDVAGAEEAKQELEEVVEFLKDPGKFTTIG 183
Query: 448 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
+IP G+LL GPPG GKTLLAKAVAGEAGV FF+IS S FVE++VGVGASRVR L+ +AK
Sbjct: 184 AKIPKGVLLAGPPGTGKTLLAKAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFTQAK 243
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
NAP ++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +ITIA+TNRPD
Sbjct: 244 KNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATNRPD 303
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
ILDPAL+RPGRFDR++ + +P L GR ILKVHAR KP+ADDVD +A T G GA+L
Sbjct: 304 ILDPALLRPGRFDRQVIVGRPDLRGREAILKVHARNKPLADDVDLKIIAKKTPGFTGADL 363
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQV-AINEAAMAVV 686
+N++ AA+ R + IT ++ +A++ G R S+ R++ A +E+ A+V
Sbjct: 364 SNLLNEAALLAARLNKKVITMAEVEEASEKVSMGPERRSHIVSDKDRKLTAYHESGHAIV 423
Query: 687 AVNFPDLKNIEFVTIAPRAGRELGYVRM-KMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 745
A P + VTI PR G GY M + +K ++ LL I V L R A+
Sbjct: 424 AHLLPHADPVHKVTIIPR-GAAGGYTMMLPTEEQNYK----TKSQLLADIRVALGGRIAE 478
Query: 746 ELWCGE 751
L E
Sbjct: 479 ALILDE 484
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 170/388 (43%), Positives = 245/388 (63%), Gaps = 23/388 (5%)
Query: 386 MAMQFMKSGARVRR-AYGKGLPQ-YLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMY 443
+ M+ M +G R ++GK + Y+E +VK +VAG+ +++ E+ E++++ +
Sbjct: 129 LMMRQMGNGGPTRAFSFGKSKAKVYIEEKPNVKLDNVAGMDEVKEEVAEVIEYLKDPARF 188
Query: 444 RRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLY 503
R+ G R P GIL G PGVGKTLLAKA+AGEA V F S+S S FVE++VGVGA+R+R +
Sbjct: 189 RKLGGRPPKGILFYGEPGVGKTLLAKALAGEAHVPFISVSGSDFVEMFVGVGAARMRDTF 248
Query: 504 QEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIAST 563
+ A+ NAP +VFIDE+DAVGR RG I G ER+ TLNQLLV +DGF+ ++ IA+T
Sbjct: 249 ETARKNAPCIVFIDEIDAVGRSRGAINLGGNDEREQTLNQLLVEMDGFDTSEGILIIAAT 308
Query: 564 NRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMV 623
NRPDILDPAL+RPGRFDR+IFIPKP + GR EILKVHA+ KP+A DVD +A T G
Sbjct: 309 NRPDILDPALLRPGRFDRQIFIPKPDVKGRYEILKVHAKNKPLAKDVDLELIARATPGFT 368
Query: 624 GAELANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGM-LDRKERSSETWRQVA 677
GA+L NI+ AA+ R + I +DL +A +E RGM + KE+ ++A
Sbjct: 369 GADLENILNEAALLAARKRKDLIHMEDLEEAIDRVMMGLERRGMAISPKEK-----EKIA 423
Query: 678 INEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY-VRMKMD--HMKFKEGMLSRQSLLDH 734
++EA A++ + PD + V+I PR G LG ++ +D H+ K +LSR
Sbjct: 424 VHEAGHALMGLMMPDADPLHKVSIIPR-GMALGVTTQLPIDDKHIYDKADLLSR------ 476
Query: 735 ITVQLAPRAADELWCGEGQVRKTLQHPL 762
I + + R A+E++ G+ + ++ L
Sbjct: 477 IHILMGGRCAEEVFYGKDGITTGAENDL 504
>sp|P0C5C0|FTSH_MYCTU ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis GN=ftsH PE=1 SV=1
Length = 760
Score = 290 bits (743), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 226/360 (62%), Gaps = 8/360 (2%)
Query: 391 MKSGARVRRAYGKGLPQYLERGV-DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 449
M+ GAR+ +GK + L + + F+DVAG+ + EL EI F + Y+ G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 450 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 509
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 510 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 569
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 570 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 629
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 630 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 687
++ AA+ R+ T IT L +A G RK R S + + A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 688 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
>sp|A5U8T5|FTSH_MYCTA ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3
SV=1
Length = 760
Score = 290 bits (743), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 226/360 (62%), Gaps = 8/360 (2%)
Query: 391 MKSGARVRRAYGKGLPQYLERGV-DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 449
M+ GAR+ +GK + L + + F+DVAG+ + EL EI F + Y+ G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 450 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 509
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 510 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 569
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 570 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 629
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 630 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 687
++ AA+ R+ T IT L +A G RK R S + + A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 688 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
>sp|P0A4V9|FTSH_MYCBO ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ftsH PE=3 SV=1
Length = 760
Score = 290 bits (743), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 226/360 (62%), Gaps = 8/360 (2%)
Query: 391 MKSGARVRRAYGKGLPQYLERGV-DVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 449
M+ GAR+ +GK + L + + F+DVAG+ + EL EI F + Y+ G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAK 194
Query: 450 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 509
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+++AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQN 254
Query: 510 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 569
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 570 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 629
DPAL+RPGRFDR+I + P L GR +L+VH++ KPMA D D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLAN 374
Query: 630 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 687
++ AA+ R+ T IT L +A G RK R S + + A +E + A
Sbjct: 375 VINEAALLTARENGTVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 688 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
>sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Medicago
sativa GN=FTSH PE=2 SV=1
Length = 706
Score = 290 bits (741), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/335 (45%), Positives = 216/335 (64%), Gaps = 2/335 (0%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F+DVAG + +LEL+E+V F + + Y G +IP G LL GPPG GKTLLA+AVAGE
Sbjct: 250 VTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 309
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AG FFS +AS+FVE++VGVGASRVR L+++AK AP +VFIDE+DAVGR+RG G G
Sbjct: 310 AGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGN 369
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ T+NQLL +DGF G VI +A+TNRPD+LD AL+RPGRFDR++ + +P + GR+
Sbjct: 370 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 429
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
+IL+VH+R K +A DVD+ +A T G G +L N++ AAI R EI+ D++ A
Sbjct: 430 KILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADA 489
Query: 655 AQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 713
+ G + SE ++ VA +EA A+V P+ + ++I PR G+ G
Sbjct: 490 LERIIAGPEKKNAVVSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPR-GQAGGLTF 548
Query: 714 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELW 748
+ + G+ SR L + + V L R A+E++
Sbjct: 549 FAPSEERLESGLYSRSYLENQMAVALGGRVAEEVF 583
>sp|Q1D491|FTSH_MYXXD ATP-dependent zinc metalloprotease FtsH OS=Myxococcus xanthus
(strain DK 1622) GN=ftsH PE=3 SV=1
Length = 638
Score = 289 bits (739), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 166/370 (44%), Positives = 225/370 (60%), Gaps = 14/370 (3%)
Query: 388 MQFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
M+ ++ G+ +GK + L E V F+DVAG + + ELEEIV F + + +
Sbjct: 124 MRQLQGGSGKAMTFGKSKAKLLSESHNKVTFADVAGADECKEELEEIVAFLKDPKKFTKL 183
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G RIP G+L+ G PG GKTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L+++
Sbjct: 184 GGRIPKGVLMMGSPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQG 243
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE VI IA+TNRP
Sbjct: 244 KKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNDGVILIAATNRP 303
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LDPAL RPGRFDR+I +P+P + GR+ +LKVH R+ P+A +VD +A T GM GA+
Sbjct: 304 DVLDPALQRPGRFDRRIVVPRPDVKGRLGVLKVHTRRVPLAPEVDLEVIARGTPGMTGAD 363
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGMLDRKERSSETWRQVAINEA 681
L N+V +A+ R + + D A E R M+ ++ T A++EA
Sbjct: 364 LENLVNESALMAARQNKERVDLSDFEAAKDKVFMGPERRSMIMTEKEKKNT----AVHEA 419
Query: 682 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 741
A++A P + VTI PR G+ LG K ++ +LD I++ +
Sbjct: 420 GHALLAKLLPGCDPLHKVTIIPR-GQALGVTWSLPTEDKVNG---YKKQMLDQISMAMGG 475
Query: 742 RAADELWCGE 751
R A+EL E
Sbjct: 476 RIAEELMFNE 485
>sp|P46469|FTSH_LACLA ATP-dependent zinc metalloprotease FtsH OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ftsH PE=3 SV=1
Length = 695
Score = 289 bits (739), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/300 (51%), Positives = 201/300 (67%), Gaps = 3/300 (1%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V+F+DVAG + + EL E+V F + + Y G RIP G+LL GPPG GKTLLAKAVAGE
Sbjct: 190 VRFADVAGSEEEKQELVEVVDFLKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAGE 249
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV F+SIS S FVE++VGVGASRVR L++ AK APS++FIDE+DAVGR+RG G G
Sbjct: 250 AGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGN 309
Query: 535 QERDATLNQLLVCLDGFEGRGN-VITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
ER+ TLNQLLV +DGF+ GN VI IA+TNR D+LDPAL+RPGRFDRK+ + P + GR
Sbjct: 310 DEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGR 369
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
+LKVHA+ KP+A DVD VA+ T G VGA+L N++ AA+ R + EI D+ +
Sbjct: 370 EAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDE 429
Query: 654 AAQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYV 712
G + S R+ VA +EA A+V + + + VT+ PR GR GY+
Sbjct: 430 GMDRAMAGPAKKDRIQSMREREIVAYHEAGHAIVGLVLENGSTVRKVTVVPR-GRIGGYM 488
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 289 bits (739), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 169/370 (45%), Positives = 224/370 (60%), Gaps = 17/370 (4%)
Query: 389 QFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G+RV +GK + + E KF DVAG + + EL E+V+F + G
Sbjct: 137 QAQGGGSRVMN-FGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIG 195
Query: 448 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
RIP G+LL GPPG GKTLLA+AVAGEAGV FFSIS S FVE++VGVGASRVR L++ AK
Sbjct: 196 ARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAK 255
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
NAP ++FIDE+DAVGR+RG G G ER+ TLNQLLV +DGF +I IA+TNR D
Sbjct: 256 KNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRAD 315
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
ILDPAL+RPGRFDR+I + +P + GR E+LKVHAR KP+ DDV+ +A+ T G GA+L
Sbjct: 316 ILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADL 375
Query: 628 ANIVEVAAINMMRDGRTEIT------TDDLLQAAQIEERGMLDRKERSSETWRQVAINEA 681
N++ AA+ R T+I+ D + A ++ ++ KE+ W +EA
Sbjct: 376 ENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAW-----HEA 430
Query: 682 AMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAP 741
VV V + + VTI PR G GY M ++ +++ LLD I L
Sbjct: 431 GHTVVGVKLENADMVHKVTIVPR-GMAGGYAVMLPKEDRY---FMTQPELLDKIIGLLGG 486
Query: 742 RAADELWCGE 751
R A+E+ GE
Sbjct: 487 RVAEEVTFGE 496
>sp|Q9CD58|FTSH_MYCLE ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium leprae
(strain TN) GN=ftsH PE=3 SV=1
Length = 787
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 225/360 (62%), Gaps = 8/360 (2%)
Query: 391 MKSGARVRRAYGKGLPQYLERGVD-VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 449
M+ GAR+ +GK + L + + F+DVAG+ + EL EI F + Y+ G +
Sbjct: 135 MQGGARMGFGFGKSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPCRYQTLGAK 194
Query: 450 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 509
IP G+LL GPPG GKTLLA+AVAGEAGV FF+IS S FVE++VGVGASRVR L+ +AK N
Sbjct: 195 IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQN 254
Query: 510 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 569
+P ++F+DE+DAVGR+RG G G ER+ TLNQLLV +DGF R VI IA+TNRPDIL
Sbjct: 255 SPCIIFVDEIDAVGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDIL 314
Query: 570 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 629
DPAL+RPGRFDR+I + P L GR +L+VH++ KP+ADD D +A T GM GA+LAN
Sbjct: 315 DPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLAN 374
Query: 630 IVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMAVVA 687
+V AA+ R+ IT L +A G RK R S + + A +E + A
Sbjct: 375 VVNEAALLTARENGLVITGPALEEAVD-RVIGGPRRKGRIISEQEKKITAYHEGGHTLAA 433
Query: 688 VNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADEL 747
PD++ I VTI R GR G+ + K G+ +R ++ + + RAA+EL
Sbjct: 434 WAMPDIEPIYKVTILAR-GRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEEL 489
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 226/368 (61%), Gaps = 14/368 (3%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
AM F KS AR + +E V F DVAG+ + + EL+E+V F E +
Sbjct: 190 AMSFGKSKARFQ----------MEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAI 239
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 240 GAKIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 299
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K+NAP +VFIDE+DAVGR+RG+ G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 300 KENAPCLVFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRP 359
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LD AL+RPGRFDR++ + P + GR IL +HA+ K + ++V A+A T G GA+
Sbjct: 360 DVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGAD 419
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 686
LAN++ AAI R + IT ++ A GM S++ R +A +E A++
Sbjct: 420 LANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGMEGTPLVDSKSKRLIAYHEVGHALI 479
Query: 687 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 746
P +E VT+ PR G+ G D + +++R ++ I L R A+E
Sbjct: 480 GTLCPGHDPVEKVTLIPR-GQAQGLTWFTPDE---DQSLMTRNQMIARIAGLLGGRVAEE 535
Query: 747 LWCGEGQV 754
+ G+ +V
Sbjct: 536 VIFGDDEV 543
>sp|A9BJK3|FTSH3_PETMO ATP-dependent zinc metalloprotease FtsH 3 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=ftsH3 PE=3 SV=1
Length = 645
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/369 (44%), Positives = 229/369 (62%), Gaps = 20/369 (5%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
M F+KS A+ +Y + F+DVAG+ + + EL ++VKF +++ R
Sbjct: 141 GMNFIKSPAK----------KYDPKKTRTTFNDVAGVKEAKEELTDVVKFLKDPKVFNRL 190
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G R+P G+LL G PG GKTLLA+AVAGEAGV FF IS S FVE++VGVGA+RVR L+ +A
Sbjct: 191 GARMPKGVLLVGEPGTGKTLLARAVAGEAGVPFFYISGSDFVELFVGVGAARVRDLFNQA 250
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP+++FIDE+DAVGR+RG G G ER+ TLN +LV +DGF+ +I +A+TNRP
Sbjct: 251 KANAPAIIFIDEIDAVGRQRGSGLGGGHDEREQTLNSILVEMDGFDPSIGIIVMAATNRP 310
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LD AL+RPGRFD+K+ I +P GR +ILK+H R K +A DVD +A T G VGA+
Sbjct: 311 DVLDKALLRPGRFDKKVVIDRPDAEGRKDILKIHFRGKKIAPDVDLEVLARATPGFVGAD 370
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGML--DRKER--SSETWRQVAINEAA 682
L N+V AA+ R+G IT D +A ER ++ +RK R S + VA +E
Sbjct: 371 LENLVNEAALLAARNGEKFITMKDCEEAI---ERVIVGPERKTRVLSEQEKEVVAYHELG 427
Query: 683 MAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPR 742
A++ P+ + VTI PR LGY ++ ++++ +LD I V LA R
Sbjct: 428 HAILGTILPNADPVHKVTIIPRGYAALGYTLQLPSEDRY---LMNKSEILDDIAVMLAGR 484
Query: 743 AADELWCGE 751
AA+E+ E
Sbjct: 485 AAEEIIFDE 493
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 228/368 (61%), Gaps = 14/368 (3%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
AM F KS AR + ++ V F DVAG+ + + EL+E+V F E +
Sbjct: 151 AMNFGKSKARFQ----------MDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAV 200
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G +IP G+LL GPPG GKTLLAKA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++A
Sbjct: 201 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 260
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K+NAP ++FIDE+DAVGR+RG G G ER+ TLNQLL +DGFEG +I IA+TNRP
Sbjct: 261 KENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRP 320
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LD AL+RPGRFDR++ + P GR EIL+VHAR K +A +V ++A T G GA+
Sbjct: 321 DVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGAD 380
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQVAINEAAMAVV 686
LAN++ AAI R ++ IT ++ A GM S++ R +A +E A+V
Sbjct: 381 LANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSKSKRLIAYHEVGHAIV 440
Query: 687 AVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADE 746
D ++ VT+ PR G+ G + ++G+ ++ L+ I + RAA+E
Sbjct: 441 GTLLKDHDPVQKVTLIPR-GQAQGLTWFTPNE---EQGLTTKAQLMARIAGAMGGRAAEE 496
Query: 747 LWCGEGQV 754
G+ +V
Sbjct: 497 EVFGDDEV 504
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 287 bits (734), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/367 (44%), Positives = 232/367 (63%), Gaps = 18/367 (4%)
Query: 389 QFMKSGARVRRAYGKGLPQYL-ERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
Q G R ++GK + + ++ V F DVAG+ + + EL+E+V+F ++R G
Sbjct: 124 QMQSGGGRGAMSFGKSKAKLMSDKAAKVTFQDVAGIEEAKEELQEVVQFLKDPHKFQRLG 183
Query: 448 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
+IP G+LL GPPG GKTLLA+A+AGEA V FF++S S FVE++VGVGA+RVR ++++ K
Sbjct: 184 GKIPKGVLLVGPPGTGKTLLARAIAGEANVPFFNLSGSDFVEMFVGVGAARVRDMFEQGK 243
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
NAP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE VI +A+TNRPD
Sbjct: 244 KNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESTEGVIMVAATNRPD 303
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
+LDPAL+RPGRFDR++ +P P ++GR +ILKVH K P++D VD +A T G GA+L
Sbjct: 304 VLDPALLRPGRFDRQVTVPNPDILGRTQILKVHMNKVPLSDSVDAEVIARATPGFSGADL 363
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERS---SETWRQ-VAINEAAM 683
AN+V AA+ + + + +D A +++ M+ + RS SE R+ A +EA
Sbjct: 364 ANLVNEAALIAAQLDKRVVEMEDFENA---KDKVMMGKPRRSAVISEKERKTTAYHEAGH 420
Query: 684 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKM---DHMKFKEGMLSRQSLLDHITVQLA 740
AVVA+ + VTI PR GR LG + M++ D + S+ L +I + +
Sbjct: 421 AVVAMALDGADPVHKVTIIPR-GRALG-LTMQLPLEDRYTY-----SKVQLEQNIAILMG 473
Query: 741 PRAADEL 747
R A+EL
Sbjct: 474 GRLAEEL 480
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 286 bits (733), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/352 (47%), Positives = 218/352 (61%), Gaps = 16/352 (4%)
Query: 409 LERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLA 468
+E V F DVAG+ + + + E+V+F E + G RIP G+LL GPPG GKTLLA
Sbjct: 205 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 264
Query: 469 KAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGL 528
KA+AGEAGV FFSIS S+FVE++VGVGASRVR L+++AK+NAP +VF+DE+DAVGR+RG
Sbjct: 265 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGT 324
Query: 529 IKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKP 588
G G ER+ TLNQLL +DGFEG +I IA+TNR DILD AL+RPGRFDR++ + P
Sbjct: 325 GIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVP 384
Query: 589 GLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITT 648
+ GR EILKVH K DV +A T G GA+LAN++ AAI R GRT I++
Sbjct: 385 DVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISS 444
Query: 649 ---DDLLQ--AAQIEERGMLDRKERSSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAP 703
DD + A +E M D K +S VA +E A+ P ++ VT+ P
Sbjct: 445 KEIDDSIDRIVAGMEGTVMTDGKSKS-----LVAYHEVGHAICGTLTPGHDPVQKVTLIP 499
Query: 704 RA-GRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGEGQV 754
R R L + + MD ++SRQ L I L RAA+E+ GE +V
Sbjct: 500 RGQARGLTWF-IPMDDPT----LISRQQLFARIVGGLGGRAAEEIIFGEPEV 546
>sp|A9BHD3|FTSH2_PETMO ATP-dependent zinc metalloprotease FtsH 2 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=ftsH2 PE=3 SV=1
Length = 630
Score = 286 bits (732), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 228/368 (61%), Gaps = 20/368 (5%)
Query: 398 RRAYGKGLP----------QYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
R G+G+P +Y + + F+DVAG+ +++ ELE+IV F + + G
Sbjct: 133 RSGTGEGIPGANYRRNPARRYDSKRNKITFNDVAGIDEVKEELEDIVNFLKDPKNFSALG 192
Query: 448 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
++P G+LL GPPG GKTL+A+AVAGEA V F+ +S S FVE++VGVGA+RVR L++EAK
Sbjct: 193 AKMPKGVLLSGPPGTGKTLVARAVAGEADVPFYFMSGSDFVELFVGVGAARVRDLFKEAK 252
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPD 567
+N+P+++FIDELDAVGR+RG G G ER+ TLN LLV +DGF+ R ++ +A+TNRPD
Sbjct: 253 ENSPAIIFIDELDAVGRQRGTGLGGGHDEREQTLNALLVEMDGFDPREGIVVMAATNRPD 312
Query: 568 ILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAEL 627
ILD AL+RPGRFD+KIF+ P L R EI+K+H R K +ADD+D ++A T G VGA+L
Sbjct: 313 ILDKALLRPGRFDKKIFLDVPDLRAREEIIKIHLRGKRIADDIDVKSLAQSTPGFVGADL 372
Query: 628 ANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLD--RKER--SSETWRQVAINEAAM 683
N+V AA+ RD R IT DD +A ER ++ RK R + + + + +E
Sbjct: 373 ENMVNEAALLAARDNRDHITNDDFQEAI---ERVIVGPARKSRKITPKEKKVITYHELGH 429
Query: 684 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRA 743
AV+ P + +TI PR LGY +F +++ + D I L RA
Sbjct: 430 AVLGYLLPYADPVHKITIVPRGQAALGYTMQLPSEDRF---LITEPEIKDKIVGMLGGRA 486
Query: 744 ADELWCGE 751
A+E+ E
Sbjct: 487 AEEIVFNE 494
>sp|B8G4Q6|FTSH_CHLAD ATP-dependent zinc metalloprotease FtsH OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=ftsH PE=3 SV=1
Length = 656
Score = 286 bits (732), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 170/371 (45%), Positives = 228/371 (61%), Gaps = 17/371 (4%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
AM F KS AR+ + P + F+DVAG + + +L EIV+F + +
Sbjct: 148 AMSFGKSRARM---FAGDKPT-------ITFADVAGQEEAKQDLAEIVEFLKFPDKFAAL 197
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G RIP G+L+ GPPG GKTLL++AVAGEAGV FFSIS S+FVE++VGVGASRVR L+ +A
Sbjct: 198 GARIPRGVLMVGPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQA 257
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP +VFIDE+DAVGR+RG G ER+ TLNQ+LV +DGF+ NVI IA+TNRP
Sbjct: 258 KRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDTNTNVIVIAATNRP 317
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LDPALVRPGRFDR++ + P + GR+EILKVH + KP+A+DV+ +A T G GA+
Sbjct: 318 DVLDPALVRPGRFDRQVVLDAPDVRGRIEILKVHVKGKPLAEDVNLEILARQTPGFSGAD 377
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ---VAINEAAM 683
L N+V AAI R + +I+ + A + G +R+ R T RQ VA +EA
Sbjct: 378 LMNVVNEAAILAARRSKRKISMAEFQDAVERVAIGGPERRSRVM-TDRQKLVVAYHEAGH 436
Query: 684 AVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRA 743
A+V P ++ VTI PR G+ GY D +S+ + V L R
Sbjct: 437 AIVGAALPKADKVQKVTIIPR-GQAGGYTLFLPDEDSLNLRTVSQ--FKARLAVSLGGRV 493
Query: 744 ADELWCGEGQV 754
A+E+ G +V
Sbjct: 494 AEEIVFGNEEV 504
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 286 bits (732), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 168/399 (42%), Positives = 236/399 (59%), Gaps = 23/399 (5%)
Query: 376 GEAEQNPHLKMAMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVK 435
G + Q+P M KS AR R G V F D+AG+ + + E EEIV
Sbjct: 159 GGSGQSP-----MSLGKSTARFERRPDTG----------VSFKDIAGIDEAKTEFEEIVS 203
Query: 436 FFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVG 495
F + Y G +IP GILL GPPG GKTLLAKA+A EA V FFS++ S+FVE+++G+G
Sbjct: 204 FLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIG 263
Query: 496 ASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRG 555
A+RVR L+++A +NAP +VFIDE+DAVGRERG G G ER+ TLNQLL +DGF+
Sbjct: 264 AARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENK 323
Query: 556 NVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAV 615
VI + +TNR DILD AL+RPGRFDR++ + P +GR+ ILKVHAR KP+ +DV + +
Sbjct: 324 GVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQL 383
Query: 616 ASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWRQ 675
A+ T G GA+LAN++ AAI R ++ IT +++ +AA G+ ++ R
Sbjct: 384 ANRTPGFSGADLANLLNEAAILATRYKKSSITKNEVNEAADRIIGGIAGAPMEDTKNKRL 443
Query: 676 VAINEAAMAVVAVNFPDLKNIEFVTIAPRAG-RELGYVRMKMDHMKFKEGMLSRQSLLDH 734
+A +E A+ +E +T+ PR G + L + + D + +LSR +LL
Sbjct: 444 IAYHEVGHAITGSVLKSHDEVEKITLTPRGGAKGLTWFTPEED-----QSLLSRSALLAR 498
Query: 735 ITVQLAPRAADELWCGEGQVRKTLQHPLLFVGNVKLARR 773
I L RAA+++ GE +V L V N LAR+
Sbjct: 499 IITTLGGRAAEQVIFGEPEVTTGASSDLQQVTN--LARQ 535
>sp|C1F8X6|FTSH_ACIC5 ATP-dependent zinc metalloprotease FtsH OS=Acidobacterium
capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
GN=ftsH PE=3 SV=1
Length = 639
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 162/364 (44%), Positives = 227/364 (62%), Gaps = 14/364 (3%)
Query: 391 MKSGARVRRAYGKGLPQYLE-RGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVR 449
M+SG ++GK + L + V F DVAG+ + + EL+EI++F + +++ G R
Sbjct: 128 MQSGGNKALSFGKSRARLLSMQQKKVTFKDVAGVDEAKEELKEIIEFLREAQKFQKLGGR 187
Query: 450 IPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDN 509
IP G+LL GPPG GKTLLA+AVAGEA V FFSIS S FVE++VGVGASRVR L+++ K N
Sbjct: 188 IPKGVLLVGPPGTGKTLLARAVAGEANVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKN 247
Query: 510 APSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRPDIL 569
AP ++FIDE+DAVGR RG G G ER+ TLNQLLV +DGFE VI +A+TNRPD+L
Sbjct: 248 APCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEANDGVILVAATNRPDVL 307
Query: 570 DPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAELAN 629
DPAL+RPGRFDR++ + +P + GR E+L+VHA+K P+A+DVD +A T G GA+LAN
Sbjct: 308 DPALLRPGRFDRRVVVGRPDVRGREEVLRVHAKKVPLAEDVDLRVLARGTPGFSGADLAN 367
Query: 630 IVEVAAINMMRDGRTEITTDDLLQAAQ-----IEERGMLDRKERSSETWRQVAINEAAMA 684
+V A++ R R +T D A E + ML + E R A +E+ A
Sbjct: 368 MVNEGALSAARANRKVVTMQDFESAKDKVLMGAERKSML----LTDEEKRVTAYHESGHA 423
Query: 685 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 744
+VA + VTI PR G LG + M + + +++ L + + + R A
Sbjct: 424 IVAAMRKHADPLHKVTIIPR-GMALG---VTMQLPEEDKHTVTKDYLETQLAILMGGRIA 479
Query: 745 DELW 748
+E++
Sbjct: 480 EEIF 483
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 159/363 (43%), Positives = 230/363 (63%), Gaps = 19/363 (5%)
Query: 388 MQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
M F K+ A++ Y E + F DVAG + + L EIV F Y G
Sbjct: 146 MSFGKNNAKL----------YAENETGITFKDVAGQDEAKESLVEIVDFLHDTRKYVEIG 195
Query: 448 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
++P G LL GPPG GKTLLAKAVAGEA V FFS+S S FVE++VG+GA+RVR L+++A+
Sbjct: 196 AKLPKGALLVGPPGTGKTLLAKAVAGEAKVPFFSMSGSDFVEMFVGMGAARVRDLFKQAE 255
Query: 508 DNAPSVVFIDELDAVGRER-GLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
+ AP +VFIDE+DA+G+ R G I+G+ ER+ TLNQLL +DGF+ V+ +A+TNRP
Sbjct: 256 EKAPCIVFIDEIDAIGKSRDGAIQGN--DEREQTLNQLLTEMDGFDSSKGVVILAATNRP 313
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
++LD AL+RPGRFDR+I + +P LIGR EILKVH+R ++DDV +A T G VGA+
Sbjct: 314 EVLDKALLRPGRFDRRIIVDRPDLIGREEILKVHSRDVKLSDDVSLEEIAKSTPGAVGAD 373
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKER--SSETWRQVAINEAAMA 684
LANIV AA+ ++ GR + +DL +A ++ G ++++R S + + VA +E A
Sbjct: 374 LANIVNEAALRAVKHGRKFVIQEDLDEAVEVIIAGQ-EKRDRILSPKEKKIVAYHEVGHA 432
Query: 685 VVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAA 744
+VA + + +TI PR LGY + K+ ++S++ ++D I+V L RAA
Sbjct: 433 LVAALLNNTDPVHKITIVPRTMGALGYTMQLPEEEKY---LVSKEEMIDQISVMLGGRAA 489
Query: 745 DEL 747
+E+
Sbjct: 490 EEV 492
>sp|Q6MJV1|FTSH2_BDEBA ATP-dependent zinc metalloprotease FtsH 2 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH2 PE=3 SV=1
Length = 615
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 233/371 (62%), Gaps = 25/371 (6%)
Query: 388 MQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRG 447
M KSGAR+ Y E GV V F DVAG+ + + EL E+V+F + + R G
Sbjct: 135 MSVGKSGARL----------YAETGVKVSFGDVAGVEEAKAELYEVVQFLKSPQEFGRLG 184
Query: 448 VRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEAK 507
R+P GILL GPPG GKTLLAKAVAGEA V F+SI+ S+FVE++VGVGA+RVR L+++A+
Sbjct: 185 ARMPKGILLVGPPGTGKTLLAKAVAGEAQVPFYSITGSEFVEMFVGVGAARVRDLFEQAR 244
Query: 508 DNAPSVVFIDELDAVGRERGLIKGSGGQ-ERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
NAP ++FIDELDA+G+ RG+ GG E++ TLNQLL LDGF+ R V+ +A+TNRP
Sbjct: 245 KNAPCIIFIDELDALGKVRGVAGSFGGHDEKEQTLNQLLAELDGFDSRSGVVILAATNRP 304
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
++LDPAL+R GRFDR++ + +P GR +IL+VH +K + ++ +A +T G GA+
Sbjct: 305 EVLDPALLRAGRFDRQVLVDRPDRTGREQILRVHLKKIKADEALNVEHLAHLTSGFTGAD 364
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQA-----AQIEERG-MLDRKERSSETWRQVAINE 680
+AN++ AA+ R + D + A A +E++ +L+ KE++ VA +E
Sbjct: 365 IANLINEAAMVATRRKAETVNEKDFVAAIERIVAGLEKKSRLLNEKEKAI-----VAHHE 419
Query: 681 AAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLA 740
A++A FP + ++ ++I PR LGY + ++ +++R LLD I V L
Sbjct: 420 MGHAIMACLFPGVDKVQKISIIPRGLGALGYTMQRPTEDRY---LMTRPELLDKICVLLG 476
Query: 741 PRAADELWCGE 751
R A+EL GE
Sbjct: 477 GRVAEELIFGE 487
>sp|Q4L3G8|FTSH_STAHJ ATP-dependent zinc metalloprotease FtsH OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ftsH PE=3 SV=1
Length = 727
Score = 285 bits (730), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 216/338 (63%), Gaps = 5/338 (1%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V+FSDVAG + + EL EIV F + +++ G RIP G+LL GPPG GKTLLA+AVAGE
Sbjct: 162 VRFSDVAGADEEKQELIEIVDFLKDNKKFKQMGSRIPKGVLLVGPPGTGKTLLARAVAGE 221
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AG FFSIS S FVE++VGVGASRVR L++ AK NAP ++FIDE+DAVGR+RG G G
Sbjct: 222 AGAPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGVGGGH 281
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
ER+ TLNQLLV +DGF +I IA+TNRPDILDPAL+RPGRFDR+I + +P + GR
Sbjct: 282 DEREQTLNQLLVEMDGFGENEGIIMIAATNRPDILDPALLRPGRFDRQIQVGRPDVKGRE 341
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
IL VH++ KP+ + VD A++ T G GA+L N++ A++ R+G+ +I D+ +A
Sbjct: 342 AILHVHSKNKPLDETVDLKAISQRTPGFSGADLENLLNEASLIAAREGKNKIDMRDIEEA 401
Query: 655 AQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 713
G + S+ R VA +EA V+ + + + + VTI PR G+ GY
Sbjct: 402 TDRVIAGPAKKSRVISDKERNIVAHHEAGHTVIGMVLDEAEVVHKVTIVPR-GQAGGYAM 460
Query: 714 MKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 751
M +F +++ LLD I L R ++++ E
Sbjct: 461 MLPKQDRF---LMTEPELLDKICGLLGGRVSEDINFHE 495
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 285 bits (730), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 168/362 (46%), Positives = 222/362 (61%), Gaps = 15/362 (4%)
Query: 387 AMQFMKSGARVRRAYGKGLPQYLERGVDVKFSDVAGLGKIRLELEEIVKFFTHGEMYRRR 446
A+ F KS ARV + V F DVAG+ + + EL+EIV+F + E +
Sbjct: 142 ALSFGKSRARV----------FTSNRPTVTFDDVAGVDEAKEELQEIVEFLKYPEKFAAL 191
Query: 447 GVRIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIYVGVGASRVRSLYQEA 506
G RIP G+LL GPPG GKTLL++AVAGEAGV FFSIS S+FVE++VGVGASRVR L+ +A
Sbjct: 192 GARIPRGVLLVGPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQA 251
Query: 507 KDNAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVCLDGFEGRGNVITIASTNRP 566
K NAP +VFIDE+DAVGR+RG G ER+ TLNQ+LV +DGF+ NVI IA+TNRP
Sbjct: 252 KRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDSSTNVIVIAATNRP 311
Query: 567 DILDPALVRPGRFDRKIFIPKPGLIGRMEILKVHARKKPMADDVDYLAVASMTDGMVGAE 626
D+LDPAL+RPGRFDR++ + +P L GR+ ILKVH R KP+ DVD +A T G GA+
Sbjct: 312 DVLDPALLRPGRFDRQVVLDRPDLHGRLAILKVHTRGKPLESDVDLEDLARQTPGFSGAD 371
Query: 627 LANIVEVAAINMMRDGRTEITTDDLLQAAQIEERGMLDRKERSSETWR-QVAINEAAMAV 685
L N+V AAI R + I +L +A G + R SE + A +EA A+
Sbjct: 372 LENLVNEAAILAARRNKKTIGRRELYEAIDRVVAGPERKSRRISEREKLMTAYHEAGHAL 431
Query: 686 VAVNFPDLKNIEFVTIAPRAGRELGYVRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAAD 745
VA P + V+I R G GY R+ + +F +++ + V +A A+
Sbjct: 432 VARMLPHADPVHKVSIVAR-GMMGGYTRVLPEEDRF---FWTKKQFEAQLAVFMAGLVAE 487
Query: 746 EL 747
EL
Sbjct: 488 EL 489
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 285 bits (730), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 164/340 (48%), Positives = 220/340 (64%), Gaps = 7/340 (2%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
V F+DVAG+ +++ ELEEIV + + + YR G RIP G+LL GPPG GKTLLA+AVAGE
Sbjct: 149 VTFADVAGMDEVKGELEEIVDYLKNPDKYRAIGARIPKGVLLYGPPGTGKTLLARAVAGE 208
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
AGV FF++S S FVE++VG+GASRVR L+ +A+ NAP +VFIDE+DAVGR+RG GG
Sbjct: 209 AGVPFFALSGSSFVELFVGMGASRVRELFAQARKNAPCIVFIDEIDAVGRQRGSAAVVGG 268
Query: 535 Q-ERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGR 593
ER+ TLNQLL +DGF VI +A+TNRPD+LD AL+RPGRFDR+I + P GR
Sbjct: 269 HDEREQTLNQLLTEMDGFGAYEGVIVMAATNRPDVLDKALLRPGRFDRQIPVGPPDAAGR 328
Query: 594 MEILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQ 653
EIL+VHA+ K + +D AVA T G GA+LAN++ AAI +R GR+ IT ++ +
Sbjct: 329 EEILRVHAKGKQLDPSLDLAAVARRTPGFTGADLANLLNEAAILAVRRGRSHITMSEIDE 388
Query: 654 AAQIEERGMLDRKER--SSETWRQVAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGY 711
A G RK R E R+VA++EA A+VA P ++ VTI PR GR G+
Sbjct: 389 AIDRVVAGGPARKGRMIRPEEKRRVAVHEAGHALVATLTPGADPVQKVTIIPR-GRAGGF 447
Query: 712 VRMKMDHMKFKEGMLSRQSLLDHITVQLAPRAADELWCGE 751
+ + + +R L + + L AA+E+ GE
Sbjct: 448 TLTTPEEDQM---LYTRSELEARLKMLLGGLAAEEVLLGE 484
>sp|D1C2C6|FTSH2_SPHTD ATP-dependent zinc metalloprotease FtsH 2 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH2 PE=3
SV=1
Length = 652
Score = 285 bits (729), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 159/320 (49%), Positives = 212/320 (66%), Gaps = 7/320 (2%)
Query: 415 VKFSDVAGLGKIRLELEEIVKFFTHGEMYRRRGVRIPGGILLCGPPGVGKTLLAKAVAGE 474
+ F DVAG +++ E+ +IV + E +RR G RIP G+LL GPPG GKTLL +A+AGE
Sbjct: 157 ITFDDVAGAEEVKEEVADIVDYLRDPERFRRLGARIPRGVLLTGPPGTGKTLLTRALAGE 216
Query: 475 AGVNFFSISASQFVEIYVGVGASRVRSLYQEAKDNAPSVVFIDELDAVGRERGLIKGSGG 534
A +FFS+S S+FVE+YVGVGASRVR L+++AK+NAP+++FIDE+DA+GR RG ++ S
Sbjct: 217 ARASFFSVSGSEFVELYVGVGASRVRELFRKAKENAPAIIFIDEIDAIGRRRGRMEQS-- 274
Query: 535 QERDATLNQLLVCLDGFEGRGNVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIGRM 594
E D TLNQ+LV +DGFE R V+ +A+TNR DILDPAL+RPGRFDRK+ + P R
Sbjct: 275 SEYDQTLNQILVEMDGFEERTTVVVVAATNRVDILDPALLRPGRFDRKVVVDLPDRKARR 334
Query: 595 EILKVHARKKPMADDVDYLAVASMTDGMVGAELANIVEVAAINMMRDGRTEITTDDLLQA 654
IL+VHAR KP+A++V+ +A+ T GM GA+LAN++ AAI RD R IT DLL+A
Sbjct: 335 AILEVHARGKPLAENVNLDELAARTTGMTGADLANVINEAAILAARDRRETITNQDLLEA 394
Query: 655 AQIEERGMLDRKERSSETWRQ-VAINEAAMAVVAVNFPDLKNIEFVTIAPRAGRELGYVR 713
G R SE R+ VA +EA AVVA P + V+I R GR GY
Sbjct: 395 LDRTLAGPARNARRFSERERRVVAYHEAGHAVVAHLLPHADPVRKVSIVSR-GRAGGYTM 453
Query: 714 MKMDHMKFKEGMLSRQSLLD 733
+ D + G+ +R L D
Sbjct: 454 IVPDEDR---GLWTRAQLSD 470
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 296,613,798
Number of Sequences: 539616
Number of extensions: 13252979
Number of successful extensions: 108673
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2228
Number of HSP's successfully gapped in prelim test: 2304
Number of HSP's that attempted gapping in prelim test: 83027
Number of HSP's gapped (non-prelim): 18195
length of query: 804
length of database: 191,569,459
effective HSP length: 126
effective length of query: 678
effective length of database: 123,577,843
effective search space: 83785777554
effective search space used: 83785777554
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)