Query 003670
Match_columns 804
No_of_seqs 354 out of 2748
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 03:48:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003670.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003670hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 3E-150 7E-155 1316.0 44.6 729 1-758 364-1093(1151)
2 PLN03190 aminophospholipid tra 100.0 3E-126 6E-131 1155.5 75.4 720 1-761 430-1161(1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 5E-117 1E-121 1087.5 78.5 719 1-752 336-1057(1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 6E-106 1E-110 861.9 47.2 661 4-751 387-1050(1051)
5 COG0474 MgtA Cation transport 100.0 1.2E-83 2.6E-88 774.3 42.5 557 4-725 328-898 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 2.8E-81 6.1E-86 691.1 32.4 614 4-743 312-970 (972)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 4.3E-77 9.3E-82 723.9 55.6 645 4-742 339-1048(1053)
8 TIGR01116 ATPase-IIA1_Ca sarco 100.0 3.3E-76 7.1E-81 714.3 50.7 613 5-740 270-917 (917)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 2.4E-75 5.2E-80 711.2 52.3 609 5-742 325-986 (997)
10 KOG0204 Calcium transporting A 100.0 4.6E-76 9.9E-81 648.7 27.6 570 5-739 416-1006(1034)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 2E-73 4.4E-78 692.7 49.2 562 4-738 356-938 (941)
12 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.6E-69 3.5E-74 654.7 51.8 561 4-742 304-883 (884)
13 TIGR01657 P-ATPase-V P-type AT 100.0 1.1E-68 2.3E-73 657.1 51.7 575 4-690 428-1024(1054)
14 PRK15122 magnesium-transportin 100.0 2.1E-67 4.6E-72 632.7 45.1 538 4-742 349-899 (903)
15 PRK10517 magnesium-transportin 100.0 6.7E-65 1.5E-69 610.0 44.5 519 4-727 351-885 (902)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 2.2E-64 4.7E-69 606.3 47.9 524 4-736 316-857 (867)
17 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.4E-64 3E-69 557.3 18.5 613 3-745 345-1010(1019)
18 KOG0208 Cation transport ATPas 100.0 1.5E-62 3.3E-67 549.1 34.3 542 4-636 448-1012(1140)
19 TIGR01647 ATPase-IIIA_H plasma 100.0 3.9E-59 8.4E-64 554.1 41.7 460 4-672 266-730 (755)
20 KOG0209 P-type ATPase [Inorgan 100.0 1.6E-48 3.5E-53 427.2 38.8 598 7-745 462-1150(1160)
21 PRK14010 potassium-transportin 100.0 3.4E-49 7.4E-54 453.7 29.2 353 4-589 278-644 (673)
22 PRK01122 potassium-transportin 100.0 5.8E-48 1.3E-52 443.9 32.1 356 4-589 278-648 (679)
23 TIGR01497 kdpB K+-transporting 100.0 6.4E-46 1.4E-50 426.0 29.2 356 4-588 279-648 (675)
24 TIGR01494 ATPase_P-type ATPase 100.0 3.3E-41 7.3E-46 386.8 29.5 272 5-542 211-483 (499)
25 KOG0205 Plasma membrane H+-tra 100.0 1.6E-43 3.5E-48 379.6 8.3 350 3-537 306-661 (942)
26 COG2217 ZntA Cation transport 100.0 6.5E-37 1.4E-41 352.4 28.8 295 5-543 386-682 (713)
27 KOG0207 Cation transport ATPas 100.0 9.5E-35 2.1E-39 326.9 28.5 301 6-541 564-866 (951)
28 PRK11033 zntA zinc/cadmium/mer 100.0 7.3E-35 1.6E-39 345.5 28.6 289 5-541 417-709 (741)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 3E-33 6.6E-38 324.1 24.8 299 5-541 227-528 (556)
30 COG2216 KdpB High-affinity K+ 100.0 4.3E-32 9.3E-37 286.1 20.2 311 3-541 278-590 (681)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 1.9E-31 4.2E-36 308.1 24.8 288 5-541 258-547 (562)
32 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.8E-31 8.3E-36 304.6 24.1 279 4-541 226-507 (536)
33 PRK10671 copA copper exporting 100.0 1.3E-30 2.7E-35 315.6 28.3 292 5-540 498-792 (834)
34 PF00702 Hydrolase: haloacid d 99.9 1.8E-22 3.9E-27 206.2 10.4 97 298-480 115-215 (215)
35 PF13246 Hydrolase_like2: Puta 99.5 1.3E-14 2.8E-19 125.7 6.6 90 123-230 1-90 (91)
36 COG4087 Soluble P-type ATPase 99.5 1.1E-13 2.4E-18 121.6 10.9 126 299-511 19-146 (152)
37 PF00689 Cation_ATPase_C: Cati 99.3 3.5E-11 7.7E-16 119.5 12.1 173 554-738 3-182 (182)
38 PRK10513 sugar phosphate phosp 99.2 7.2E-11 1.6E-15 125.2 8.5 198 298-503 11-254 (270)
39 PRK15126 thiamin pyrimidine py 99.1 1.6E-10 3.4E-15 122.6 7.5 197 298-499 10-242 (272)
40 COG0561 Cof Predicted hydrolas 99.0 3.7E-10 8E-15 119.3 8.3 194 303-503 12-247 (264)
41 PRK10976 putative hydrolase; P 99.0 3.6E-10 7.8E-15 119.5 7.5 200 298-502 10-249 (266)
42 PF08282 Hydrolase_3: haloacid 99.0 4.3E-10 9.4E-15 117.4 4.8 194 309-503 14-244 (254)
43 PLN02887 hydrolase family prot 98.9 9.7E-10 2.1E-14 126.1 6.4 191 310-503 325-565 (580)
44 PRK01158 phosphoglycolate phos 98.9 3.8E-09 8.1E-14 109.2 8.8 183 308-503 17-215 (230)
45 PRK10530 pyridoxal phosphate ( 98.9 7.9E-09 1.7E-13 109.6 10.8 191 310-503 20-257 (272)
46 TIGR01482 SPP-subfamily Sucros 98.8 1.3E-08 2.8E-13 104.7 8.9 182 310-503 15-207 (225)
47 TIGR00099 Cof-subfamily Cof su 98.8 1.2E-08 2.5E-13 107.3 7.5 199 298-503 7-246 (256)
48 COG0560 SerB Phosphoserine pho 98.8 5.8E-08 1.3E-12 98.2 12.1 122 309-502 76-200 (212)
49 TIGR01487 SPP-like sucrose-pho 98.8 1.7E-08 3.7E-13 103.1 8.0 186 298-503 9-205 (215)
50 PRK03669 mannosyl-3-phosphogly 98.8 2.7E-08 5.8E-13 105.5 9.6 198 298-503 15-254 (271)
51 TIGR02137 HSK-PSP phosphoserin 98.7 3.8E-08 8.2E-13 99.0 9.8 126 310-510 68-194 (203)
52 PRK11133 serB phosphoserine ph 98.7 3.4E-08 7.3E-13 106.2 8.6 131 310-513 181-314 (322)
53 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 6.8E-08 1.5E-12 101.5 10.4 187 311-502 17-241 (256)
54 TIGR02461 osmo_MPG_phos mannos 98.5 2.6E-07 5.6E-12 94.8 7.7 52 308-359 13-68 (225)
55 TIGR00338 serB phosphoserine p 98.5 4.9E-07 1.1E-11 92.6 8.9 123 310-505 85-211 (219)
56 PRK00192 mannosyl-3-phosphogly 98.5 6E-07 1.3E-11 95.3 9.6 50 298-350 12-61 (273)
57 KOG1615 Phosphoserine phosphat 98.4 7.9E-07 1.7E-11 84.6 8.1 128 310-505 88-219 (227)
58 TIGR01485 SPP_plant-cyano sucr 98.4 1.2E-06 2.6E-11 91.6 10.2 187 298-490 9-214 (249)
59 TIGR02471 sucr_syn_bact_C sucr 98.4 1.1E-06 2.4E-11 91.1 9.5 56 442-498 152-212 (236)
60 TIGR01670 YrbI-phosphatas 3-de 98.4 1.4E-06 3E-11 83.8 9.4 96 318-503 36-134 (154)
61 TIGR02463 MPGP_rel mannosyl-3- 98.4 1.5E-06 3.2E-11 89.2 9.8 37 314-350 20-56 (221)
62 TIGR02726 phenyl_P_delta pheny 98.4 1.2E-06 2.7E-11 85.0 8.6 97 317-502 41-139 (169)
63 KOG4383 Uncharacterized conser 98.4 5.5E-05 1.2E-09 84.0 21.9 286 291-592 807-1153(1354)
64 PTZ00174 phosphomannomutase; P 98.3 1.3E-06 2.9E-11 91.1 8.7 50 440-490 179-235 (247)
65 PRK14502 bifunctional mannosyl 98.3 2.9E-06 6.3E-11 97.4 11.4 176 311-490 434-661 (694)
66 PRK13582 thrH phosphoserine ph 98.3 6.2E-06 1.3E-10 83.4 11.5 125 310-510 68-194 (205)
67 PRK09484 3-deoxy-D-manno-octul 98.2 3E-06 6.5E-11 84.0 8.0 112 317-518 55-176 (183)
68 TIGR01484 HAD-SF-IIB HAD-super 98.2 8E-06 1.7E-10 82.6 10.8 172 310-485 17-204 (204)
69 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.2 4.7E-06 1E-10 83.9 8.5 118 310-498 80-200 (201)
70 PLN02382 probable sucrose-phos 98.1 1.5E-05 3.2E-10 89.1 12.0 176 315-497 33-231 (413)
71 PRK10187 trehalose-6-phosphate 98.1 9.5E-06 2.1E-10 85.5 9.9 180 310-505 36-234 (266)
72 PRK12702 mannosyl-3-phosphogly 98.1 1.7E-05 3.8E-10 82.3 11.0 41 309-349 17-57 (302)
73 PF12710 HAD: haloacid dehalog 98.1 1E-05 2.3E-10 80.7 8.4 39 313-351 92-130 (192)
74 TIGR03333 salvage_mtnX 2-hydro 98.0 2.7E-05 5.8E-10 79.5 10.5 139 309-511 69-208 (214)
75 PRK08238 hypothetical protein; 98.0 0.0015 3.2E-08 74.3 24.9 40 310-349 72-111 (479)
76 PLN02954 phosphoserine phospha 98.0 2.9E-05 6.3E-10 79.7 9.9 41 310-350 84-124 (224)
77 PRK14501 putative bifunctional 97.9 0.00023 4.9E-09 86.1 15.9 184 311-507 515-716 (726)
78 cd01427 HAD_like Haloacid deha 97.8 5E-05 1.1E-09 70.6 7.5 116 308-484 22-138 (139)
79 TIGR01488 HAD-SF-IB Haloacid D 97.8 6.6E-05 1.4E-09 73.9 8.3 40 311-350 74-113 (177)
80 TIGR01489 DKMTPPase-SF 2,3-dik 97.8 8.5E-05 1.9E-09 73.8 9.1 42 309-350 71-112 (188)
81 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.8 8.2E-05 1.8E-09 75.0 9.0 111 308-487 85-198 (202)
82 PRK09552 mtnX 2-hydroxy-3-keto 97.8 0.00014 3E-09 74.5 10.3 38 310-347 74-111 (219)
83 PLN02423 phosphomannomutase 97.7 0.00015 3.3E-09 75.4 8.7 176 310-490 24-235 (245)
84 COG1778 Low specificity phosph 97.6 0.00014 3.1E-09 67.3 7.1 104 317-510 42-154 (170)
85 PRK13222 phosphoglycolate phos 97.6 0.00035 7.6E-09 71.7 10.0 42 309-350 92-133 (226)
86 TIGR01454 AHBA_synth_RP 3-amin 97.5 0.0004 8.8E-09 70.2 9.4 41 310-350 75-115 (205)
87 COG0546 Gph Predicted phosphat 97.4 0.00062 1.3E-08 69.7 9.6 126 308-510 87-216 (220)
88 PRK13223 phosphoglycolate phos 97.2 0.0013 2.8E-08 69.7 9.4 41 309-349 100-140 (272)
89 TIGR01449 PGP_bact 2-phosphogl 97.2 0.0012 2.6E-08 67.0 8.8 41 310-350 85-125 (213)
90 TIGR01545 YfhB_g-proteo haloac 97.2 0.0024 5.3E-08 64.7 10.6 109 310-488 94-203 (210)
91 PRK13226 phosphoglycolate phos 97.2 0.002 4.3E-08 66.4 9.8 40 310-349 95-134 (229)
92 TIGR00685 T6PP trehalose-phosp 97.1 0.005 1.1E-07 64.1 12.2 65 443-510 163-238 (244)
93 PRK13288 pyrophosphatase PpaX; 97.1 0.0018 3.8E-08 66.0 8.7 41 310-350 82-122 (214)
94 PF05116 S6PP: Sucrose-6F-phos 97.1 0.0015 3.3E-08 68.0 7.8 162 322-490 31-211 (247)
95 PLN03243 haloacid dehalogenase 97.0 0.0035 7.6E-08 65.8 9.7 41 310-350 109-149 (260)
96 PLN02205 alpha,alpha-trehalose 96.9 0.026 5.7E-07 68.7 17.8 61 298-358 604-668 (854)
97 PRK10826 2-deoxyglucose-6-phos 96.9 0.0037 8E-08 64.0 8.9 42 309-350 91-132 (222)
98 PRK13225 phosphoglycolate phos 96.8 0.005 1.1E-07 65.1 9.6 41 310-350 142-182 (273)
99 PRK11590 hypothetical protein; 96.8 0.009 1.9E-07 60.7 11.1 110 310-489 95-205 (211)
100 TIGR01544 HAD-SF-IE haloacid d 96.7 0.0051 1.1E-07 64.3 8.4 45 310-354 121-165 (277)
101 PRK11587 putative phosphatase; 96.7 0.0069 1.5E-07 61.8 8.9 40 310-349 83-122 (218)
102 PLN02580 trehalose-phosphatase 96.6 0.032 7E-07 61.1 13.8 68 440-510 291-372 (384)
103 TIGR01422 phosphonatase phosph 96.6 0.01 2.2E-07 62.1 9.6 41 310-350 99-139 (253)
104 TIGR03351 PhnX-like phosphonat 96.6 0.0095 2.1E-07 60.8 9.0 42 309-350 86-127 (220)
105 PRK13478 phosphonoacetaldehyde 96.5 0.015 3.3E-07 61.4 10.2 40 310-349 101-140 (267)
106 PLN02575 haloacid dehalogenase 96.4 0.014 3.1E-07 63.9 9.9 41 310-350 216-256 (381)
107 smart00775 LNS2 LNS2 domain. T 96.4 0.013 2.7E-07 56.5 8.0 34 308-341 25-58 (157)
108 COG3769 Predicted hydrolase (H 96.4 0.094 2E-06 51.7 13.6 47 314-360 27-78 (274)
109 PLN03017 trehalose-phosphatase 96.3 0.097 2.1E-06 56.9 15.4 46 298-344 119-166 (366)
110 COG4030 Uncharacterized protei 96.3 0.016 3.4E-07 57.0 8.3 148 310-503 83-251 (315)
111 TIGR01548 HAD-SF-IA-hyp1 haloa 96.3 0.014 3.1E-07 58.4 8.5 44 307-350 103-146 (197)
112 TIGR01672 AphA HAD superfamily 96.1 0.0091 2E-07 61.4 6.0 41 310-350 114-158 (237)
113 TIGR02253 CTE7 HAD superfamily 96.1 0.026 5.7E-07 57.6 9.3 40 310-349 94-133 (221)
114 PRK06769 hypothetical protein; 96.1 0.037 8.1E-07 54.2 9.8 40 298-337 12-55 (173)
115 PRK06698 bifunctional 5'-methy 96.1 0.026 5.6E-07 64.6 9.9 41 310-350 330-370 (459)
116 TIGR01662 HAD-SF-IIIA HAD-supe 96.0 0.023 5E-07 52.8 7.5 41 309-349 24-72 (132)
117 PLN02779 haloacid dehalogenase 96.0 0.037 8.1E-07 59.0 9.9 38 310-347 144-181 (286)
118 PRK08942 D,D-heptose 1,7-bisph 95.8 0.061 1.3E-06 53.1 10.2 53 459-511 119-176 (181)
119 PRK11009 aphA acid phosphatase 95.7 0.026 5.6E-07 58.0 7.3 40 310-349 114-157 (237)
120 PRK09449 dUMP phosphatase; Pro 95.7 0.063 1.4E-06 54.9 10.0 39 310-349 95-133 (224)
121 TIGR01428 HAD_type_II 2-haloal 95.7 0.039 8.4E-07 55.3 8.2 40 310-349 92-131 (198)
122 PLN02770 haloacid dehalogenase 95.6 0.041 8.9E-07 57.4 8.2 41 310-350 108-148 (248)
123 PHA02530 pseT polynucleotide k 95.6 0.024 5.1E-07 61.0 6.7 45 306-350 183-227 (300)
124 PLN02940 riboflavin kinase 95.4 0.043 9.3E-07 61.0 8.2 40 310-349 93-133 (382)
125 COG4359 Uncharacterized conser 95.4 0.055 1.2E-06 51.7 7.5 38 446-484 146-183 (220)
126 PF13419 HAD_2: Haloacid dehal 95.4 0.031 6.6E-07 54.2 6.3 43 308-350 75-117 (176)
127 TIGR01990 bPGM beta-phosphoglu 95.4 0.034 7.3E-07 54.9 6.6 38 310-349 87-124 (185)
128 PRK14988 GMP/IMP nucleotidase; 95.4 0.078 1.7E-06 54.3 9.4 41 310-350 93-133 (224)
129 TIGR01509 HAD-SF-IA-v3 haloaci 95.2 0.07 1.5E-06 52.4 8.2 39 310-349 85-123 (183)
130 TIGR01685 MDP-1 magnesium-depe 95.1 0.091 2E-06 51.3 8.4 51 300-350 35-86 (174)
131 PLN02811 hydrolase 95.1 0.085 1.8E-06 53.9 8.7 31 310-340 78-108 (220)
132 TIGR02009 PGMB-YQAB-SF beta-ph 95.1 0.048 1E-06 53.8 6.7 39 309-349 87-125 (185)
133 TIGR02254 YjjG/YfnB HAD superf 94.8 0.12 2.6E-06 52.7 8.8 40 310-350 97-136 (224)
134 TIGR01549 HAD-SF-IA-v1 haloaci 94.6 0.1 2.3E-06 49.7 7.4 40 308-347 62-101 (154)
135 TIGR01668 YqeG_hyp_ppase HAD s 94.1 0.15 3.3E-06 49.8 7.2 40 310-349 43-83 (170)
136 TIGR00213 GmhB_yaeD D,D-heptos 93.9 0.25 5.4E-06 48.5 8.5 49 459-507 122-174 (176)
137 TIGR02252 DREG-2 REG-2-like, H 93.9 0.19 4.2E-06 50.4 7.9 39 310-349 105-143 (203)
138 TIGR01261 hisB_Nterm histidino 93.8 0.17 3.8E-06 48.8 7.0 26 310-335 29-54 (161)
139 TIGR01533 lipo_e_P4 5'-nucleot 93.6 0.33 7.2E-06 50.8 9.0 42 308-349 116-160 (266)
140 smart00577 CPDc catalytic doma 93.3 0.095 2.1E-06 49.9 4.2 42 307-349 42-83 (148)
141 TIGR01656 Histidinol-ppas hist 93.1 0.17 3.8E-06 48.0 5.7 27 310-336 27-53 (147)
142 TIGR01681 HAD-SF-IIIC HAD-supe 93.1 0.3 6.6E-06 45.2 7.1 39 310-348 29-68 (128)
143 PRK10563 6-phosphogluconate ph 92.3 0.44 9.4E-06 48.6 7.8 38 309-349 87-124 (221)
144 PLN02151 trehalose-phosphatase 92.2 3.2 7E-05 45.2 14.4 62 446-510 268-340 (354)
145 TIGR02247 HAD-1A3-hyp Epoxide 92.2 0.27 6E-06 49.6 6.0 28 310-337 94-121 (211)
146 PRK05446 imidazole glycerol-ph 92.1 0.37 8E-06 52.6 7.1 26 309-334 29-54 (354)
147 TIGR01691 enolase-ppase 2,3-di 92.0 0.6 1.3E-05 47.6 8.2 39 308-346 93-131 (220)
148 TIGR01664 DNA-3'-Pase DNA 3'-p 91.1 0.86 1.9E-05 44.3 8.0 27 311-337 43-69 (166)
149 PF08235 LNS2: LNS2 (Lipin/Ned 90.8 1.1 2.3E-05 42.8 8.0 33 309-341 26-58 (157)
150 TIGR01686 FkbH FkbH-like domai 90.5 0.5 1.1E-05 51.3 6.3 37 310-346 31-67 (320)
151 PLN02919 haloacid dehalogenase 90.4 1.1 2.3E-05 56.6 9.9 41 310-350 161-201 (1057)
152 PF02358 Trehalose_PPase: Treh 90.2 0.43 9.3E-06 49.3 5.2 68 435-502 153-232 (235)
153 TIGR01675 plant-AP plant acid 89.9 1.2 2.6E-05 45.4 8.0 30 310-339 120-149 (229)
154 TIGR01459 HAD-SF-IIA-hyp4 HAD- 89.8 1.5 3.3E-05 45.4 9.0 47 303-349 17-65 (242)
155 COG2179 Predicted hydrolase of 89.4 2.3 5E-05 40.6 8.7 39 311-349 47-85 (175)
156 PF06888 Put_Phosphatase: Puta 88.7 2.2 4.9E-05 43.7 8.9 41 310-350 71-113 (234)
157 KOG3120 Predicted haloacid deh 88.1 3.5 7.7E-05 41.1 9.3 40 310-349 84-124 (256)
158 PLN02177 glycerol-3-phosphate 88.0 4 8.7E-05 46.8 11.4 93 445-547 174-266 (497)
159 PRK09456 ?-D-glucose-1-phospha 87.7 1.2 2.5E-05 44.7 6.2 30 310-339 84-113 (199)
160 PF13344 Hydrolase_6: Haloacid 86.2 0.67 1.5E-05 40.9 3.1 47 303-349 7-56 (101)
161 PHA02597 30.2 hypothetical pro 86.0 2.5 5.3E-05 42.1 7.5 23 461-483 146-170 (197)
162 COG0241 HisB Histidinol phosph 84.4 4.5 9.9E-05 39.6 8.1 46 437-482 89-144 (181)
163 TIGR01458 HAD-SF-IIA-hyp3 HAD- 80.9 2.5 5.5E-05 44.2 5.3 47 303-349 10-63 (257)
164 PRK10444 UMP phosphatase; Prov 80.4 2 4.4E-05 44.7 4.4 45 303-347 10-54 (248)
165 PLN02645 phosphoglycolate phos 79.8 2.4 5.3E-05 45.7 4.9 47 303-349 37-86 (311)
166 TIGR01993 Pyr-5-nucltdase pyri 79.7 4.8 0.0001 39.5 6.7 37 310-349 84-120 (184)
167 COG1877 OtsB Trehalose-6-phosp 79.7 38 0.00083 35.5 13.4 47 434-480 169-218 (266)
168 PRK10725 fructose-1-P/6-phosph 78.7 5.2 0.00011 39.3 6.6 37 312-350 90-126 (188)
169 TIGR01684 viral_ppase viral ph 78.3 3 6.6E-05 43.9 4.8 41 311-351 146-187 (301)
170 TIGR01457 HAD-SF-IIA-hyp2 HAD- 77.6 4.7 0.0001 42.0 6.1 48 303-350 10-60 (249)
171 PF09419 PGP_phosphatase: Mito 75.9 9.6 0.00021 36.9 7.2 44 306-349 55-107 (168)
172 COG0637 Predicted phosphatase/ 75.2 14 0.0003 37.7 8.6 43 309-351 85-127 (221)
173 PF03767 Acid_phosphat_B: HAD 74.8 6.1 0.00013 40.5 5.9 30 309-338 114-143 (229)
174 KOG3040 Predicted sugar phosph 74.1 13 0.00029 36.7 7.5 49 299-347 12-60 (262)
175 PHA03398 viral phosphatase sup 73.1 5.1 0.00011 42.3 4.8 40 311-350 148-188 (303)
176 PF06570 DUF1129: Protein of u 72.2 65 0.0014 32.4 12.5 23 675-697 150-172 (206)
177 TIGR01689 EcbF-BcbF capsule bi 71.1 3.5 7.7E-05 37.9 2.8 33 309-341 23-55 (126)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 69.8 12 0.00026 39.2 6.8 53 459-511 195-254 (257)
179 PF05297 Herpes_LMP1: Herpesvi 67.5 1.8 3.8E-05 44.4 0.0 45 671-725 135-179 (381)
180 COG0474 MgtA Cation transport 65.7 1.1E+02 0.0024 38.4 15.1 43 711-754 850-892 (917)
181 TIGR02251 HIF-SF_euk Dullard-l 65.0 5 0.00011 38.7 2.6 43 306-349 38-80 (162)
182 COG1011 Predicted hydrolase (H 63.9 29 0.00063 35.1 8.3 40 310-350 99-138 (229)
183 PLN03063 alpha,alpha-trehalose 63.4 2E+02 0.0043 35.5 16.4 44 311-354 533-579 (797)
184 TIGR01663 PNK-3'Pase polynucle 63.3 25 0.00053 40.8 8.2 27 311-337 198-224 (526)
185 PRK10748 flavin mononucleotide 61.6 19 0.0004 37.1 6.3 27 310-337 113-139 (238)
186 TIGR01680 Veg_Stor_Prot vegeta 61.4 34 0.00074 35.8 8.0 31 308-338 143-173 (275)
187 PTZ00445 p36-lilke protein; Pr 61.2 13 0.00029 37.2 4.7 29 311-339 76-104 (219)
188 TIGR01452 PGP_euk phosphoglyco 60.9 17 0.00036 38.5 6.0 49 303-351 11-62 (279)
189 COG4858 Uncharacterized membra 59.8 1.7E+02 0.0037 28.6 11.5 34 668-701 158-191 (226)
190 TIGR01493 HAD-SF-IA-v2 Haloaci 54.1 22 0.00047 34.4 5.1 33 310-349 90-122 (175)
191 TIGR02230 ATPase_gene1 F0F1-AT 51.5 64 0.0014 28.3 6.8 63 670-740 36-98 (100)
192 PLN03064 alpha,alpha-trehalose 51.4 4.6E+02 0.0099 32.9 16.6 38 311-348 623-661 (934)
193 COG0647 NagD Predicted sugar p 50.9 20 0.00043 37.6 4.4 47 301-347 15-61 (269)
194 cd02071 MM_CoA_mut_B12_BD meth 47.6 61 0.0013 29.4 6.6 80 245-349 22-103 (122)
195 PF09726 Macoilin: Transmembra 42.7 2.4E+02 0.0052 34.0 12.2 15 649-663 76-90 (697)
196 PRK10444 UMP phosphatase; Prov 41.2 1.3E+02 0.0029 31.1 8.8 25 459-483 190-215 (248)
197 TIGR02468 sucrsPsyn_pln sucros 41.0 2.1E+02 0.0046 36.1 11.5 65 423-487 925-1002(1050)
198 PTZ00413 lipoate synthase; Pro 40.7 3E+02 0.0066 30.5 11.4 65 285-349 180-253 (398)
199 PF12710 HAD: haloacid dehalog 40.6 12 0.00027 36.6 0.9 31 447-477 157-192 (192)
200 COG3700 AphA Acid phosphatase 40.5 50 0.0011 31.9 4.8 28 311-338 115-142 (237)
201 TIGR01460 HAD-SF-IIA Haloacid 39.9 47 0.001 34.1 5.1 47 303-349 7-57 (236)
202 cd02067 B12-binding B12 bindin 39.6 1.1E+02 0.0023 27.5 6.9 80 245-349 22-103 (119)
203 PF13380 CoA_binding_2: CoA bi 39.5 43 0.00093 30.2 4.2 39 311-349 64-103 (116)
204 TIGR01501 MthylAspMutase methy 38.5 1E+02 0.0022 28.7 6.5 80 245-349 24-111 (134)
205 PF13242 Hydrolase_like: HAD-h 38.4 28 0.00062 28.4 2.6 47 459-505 20-73 (75)
206 PF12689 Acid_PPase: Acid Phos 38.4 53 0.0011 31.9 4.8 41 310-350 45-86 (169)
207 KOG4050 Glutamate transporter 37.4 2.4E+02 0.0052 26.8 8.5 44 495-538 21-64 (188)
208 PF06570 DUF1129: Protein of u 37.2 3.7E+02 0.008 26.9 11.0 10 733-742 192-201 (206)
209 TIGR02250 FCP1_euk FCP1-like p 37.2 52 0.0011 31.5 4.6 43 307-350 55-97 (156)
210 KOG1278 Endosomal membrane pro 34.2 4.2E+02 0.0091 30.7 11.4 30 548-577 425-454 (628)
211 PRK06231 F0F1 ATP synthase sub 33.9 3E+02 0.0066 27.6 9.6 48 707-754 40-89 (205)
212 PHA03048 IMV membrane protein; 33.7 2.5E+02 0.0054 23.9 7.2 27 720-746 49-75 (93)
213 cd05013 SIS_RpiR RpiR-like pro 32.7 3.4E+02 0.0074 24.3 9.4 27 313-339 74-100 (139)
214 TIGR01459 HAD-SF-IIA-hyp4 HAD- 32.7 47 0.001 34.2 3.8 24 460-483 213-237 (242)
215 COG2503 Predicted secreted aci 31.9 2.5E+02 0.0053 29.0 8.3 30 310-339 122-151 (274)
216 PF09586 YfhO: Bacterial membr 31.7 9E+02 0.019 29.9 15.5 29 549-578 132-160 (843)
217 PRK10263 DNA translocase FtsK; 30.4 1.1E+03 0.023 30.8 15.2 9 646-654 78-86 (1355)
218 TIGR00640 acid_CoA_mut_C methy 30.2 1.6E+02 0.0036 27.2 6.5 80 245-349 25-106 (132)
219 PF08552 Kei1: Inositolphospho 29.4 5.1E+02 0.011 25.7 10.1 34 543-577 29-62 (189)
220 PF03419 Peptidase_U4: Sporula 27.9 7.5E+02 0.016 26.2 14.5 25 721-745 130-154 (293)
221 PRK10053 hypothetical protein; 27.6 33 0.00072 31.6 1.4 26 11-36 64-89 (130)
222 PF08645 PNK3P: Polynucleotide 26.9 52 0.0011 31.6 2.7 23 312-334 31-53 (159)
223 PRK02261 methylaspartate mutas 25.4 2.3E+02 0.0049 26.5 6.6 80 245-349 26-113 (137)
224 PHA02898 virion envelope prote 25.2 4.3E+02 0.0093 22.5 7.2 29 720-748 50-78 (92)
225 PF06941 NT5C: 5' nucleotidase 25.2 56 0.0012 32.3 2.7 29 310-338 73-101 (191)
226 TIGR00676 fadh2 5,10-methylene 24.6 2.9E+02 0.0063 29.0 8.1 83 237-338 15-99 (272)
227 KOG1504 Ornithine carbamoyltra 24.5 98 0.0021 31.8 4.1 47 440-486 165-218 (346)
228 PRK08508 biotin synthase; Prov 24.3 6.3E+02 0.014 26.6 10.6 37 315-351 101-153 (279)
229 TIGR01662 HAD-SF-IIIA HAD-supe 24.3 5.2E+02 0.011 23.2 9.6 95 237-350 28-126 (132)
230 COG0279 GmhA Phosphoheptose is 23.8 68 0.0015 30.8 2.7 28 313-340 123-150 (176)
231 TIGR02244 HAD-IG-Ncltidse HAD 23.8 1.1E+02 0.0023 33.5 4.6 38 311-348 185-223 (343)
232 PF10777 YlaC: Inner membrane 23.2 1.7E+02 0.0037 27.5 5.0 49 673-734 33-81 (155)
233 TIGR01457 HAD-SF-IIA-hyp2 HAD- 22.3 4.5E+02 0.0098 27.1 8.9 25 459-483 194-219 (249)
234 cd02070 corrinoid_protein_B12- 22.0 1.9E+02 0.0041 28.8 5.8 79 245-349 105-185 (201)
235 PLN03140 ABC transporter G fam 21.9 2E+03 0.043 29.1 19.1 12 588-599 594-605 (1470)
236 cd03409 Chelatase_Class_II Cla 21.8 2.3E+02 0.0049 24.2 5.7 29 304-332 36-65 (101)
237 PF02219 MTHFR: Methylenetetra 21.8 1.5E+02 0.0032 31.5 5.2 44 296-339 68-112 (287)
238 PF02261 Asp_decarbox: Asparta 21.6 65 0.0014 28.9 2.0 82 139-269 20-101 (116)
239 TIGR00223 panD L-aspartate-alp 21.5 1.8E+02 0.0039 26.5 4.8 84 137-269 18-101 (126)
240 PF04341 DUF485: Protein of un 21.3 2.8E+02 0.006 23.8 5.9 66 679-752 23-91 (91)
241 COG2194 Predicted membrane-ass 21.2 1.4E+03 0.03 26.9 13.9 137 601-742 2-146 (555)
242 TIGR00156 conserved hypothetic 21.0 54 0.0012 30.1 1.4 26 11-36 60-85 (126)
243 KOG3817 Uncharacterized conser 20.9 1.1E+03 0.024 25.7 11.4 21 737-757 304-324 (452)
244 TIGR00956 3a01205 Pleiotropic 20.8 2.1E+03 0.045 28.8 19.8 41 312-352 245-286 (1394)
245 PRK05449 aspartate alpha-decar 20.7 2E+02 0.0043 26.3 4.9 84 137-269 18-101 (126)
246 TIGR01452 PGP_euk phosphoglyco 20.5 1.2E+02 0.0026 32.0 4.3 25 459-483 218-243 (279)
247 KOG0569 Permease of the major 20.4 1.3E+03 0.029 26.5 17.9 39 718-756 434-472 (485)
248 PF05822 UMPH-1: Pyrimidine 5' 20.2 1.4E+02 0.0031 30.8 4.5 50 309-358 89-138 (246)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3.1e-150 Score=1315.97 Aligned_cols=729 Identities=60% Similarity=0.995 Sum_probs=664.7
Q ss_pred CCcCCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCC
Q 003670 1 MYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNT 80 (804)
Q Consensus 1 m~~~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (804)
|||+++++++.+|++|++|+||||+||+||||||||+|.|+|.+|+|+|..|++..++.+....++.+..
T Consensus 364 my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~---------- 433 (1151)
T KOG0206|consen 364 MYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGD---------- 433 (1151)
T ss_pred hhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCcccccc----------
Confidence 8999999999999999999999999999999999999999999999999999998777554443322111
Q ss_pred ccccccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCc
Q 003670 81 EEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGF 160 (804)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~ 160 (804)
..+ ...+++.|.|++++++.|...++++.+++|++++|+||+++|+.+++.+.+.|+++||||.|||++|+++|+
T Consensus 434 ----~~~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf 508 (1151)
T KOG0206|consen 434 ----VNE-HKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGF 508 (1151)
T ss_pred ----ccc-cccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCc
Confidence 012 456789999999999999999999999999999999999999997766799999999999999999999999
Q ss_pred EEEeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHH
Q 003670 161 EFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETR 240 (804)
Q Consensus 161 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~ 240 (804)
.|..|+++.+.+...+ .+++|++|+++||+|.|||||||||+|+|++.|||||||++|++++..+++...+.+.
T Consensus 509 ~f~~Rt~~~vti~~~g------~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~ 582 (1151)
T KOG0206|consen 509 VFLGRTPDSVTIRELG------VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQ 582 (1151)
T ss_pred eeeeccCceEEEeccc------cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHH
Confidence 9999999999999555 2589999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHH
Q 003670 241 DHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCID 320 (804)
Q Consensus 241 ~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~ 320 (804)
+|+++|+.+|+||||+|||+++++||..|+++|.+|++++ .||+++++++++.+|+||+++|++++||+||+|||++|+
T Consensus 583 ~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~ 661 (1151)
T KOG0206|consen 583 EHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIA 661 (1151)
T ss_pred HHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHH
Confidence 9999999999999999999999999999999999999999 699999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccC
Q 003670 321 KLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSAS 400 (804)
Q Consensus 321 ~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (804)
.|++||||+||||||++|||++||++|++++++|+++.++..+.+..... +... ...+.+..+...........
T Consensus 662 ~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~-----~~~~-~~~~~l~~~~~~~~~~~~~~ 735 (1151)
T KOG0206|consen 662 KLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSL-----DATA-ALKETLLRKFTEELEEAKLE 735 (1151)
T ss_pred HHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcch-----hhHH-HHHHHHHHhhhHHHHHHhhc
Confidence 99999999999999999999999999999999999999988775421111 1111 22222322222211111111
Q ss_pred CCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcC
Q 003670 401 GGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEAD 480 (804)
Q Consensus 401 ~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 480 (804)
... ..++++|||++|.++++++.+.+|+.++..|++|||||++|.||+.+|+++++..+.+|+|||||+||++|||+||
T Consensus 736 ~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~Ah 814 (1151)
T KOG0206|consen 736 HSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAH 814 (1151)
T ss_pred cCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCC
Confidence 111 3799999999999999998999999999999999999999999999999999879999999999999999999999
Q ss_pred cceeecCcchhhhhcccchhcchHhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccchHHHH
Q 003670 481 IGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYNDWFL 560 (804)
Q Consensus 481 vGI~i~g~~~~~a~~aaD~~i~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~~ 560 (804)
|||||+|+||+||+++|||+|.+|++|.+|||+||||+|.|++++++|+||||++|++++|||+++++||||++|++|++
T Consensus 815 VGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l 894 (1151)
T KOG0206|consen 815 VGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYL 894 (1151)
T ss_pred cCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCc
Q 003670 561 SLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFNDDGK 640 (804)
Q Consensus 561 ~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~ 640 (804)
.+||++||++|++++|++|||++.++++++|+||+.++++..|+|+.|+.|++.|+++++++|++++..+.......+|+
T Consensus 895 ~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~ 974 (1151)
T KOG0206|consen 895 SLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGL 974 (1151)
T ss_pred EEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999887667788999
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-chHHHHHHHHccChHHHH
Q 003670 641 TVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWYLFMLAYGAITPTHST-NAYKVFIEALAPAPLFWL 719 (804)
Q Consensus 641 ~~~~~~~~t~~ft~~v~~~n~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~wl 719 (804)
+.|.+.+|+++||++|+++|+++++.+++|||++|+++|||+++||++.++|...++.+.. ..+..++....++|.||+
T Consensus 975 ~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl 1054 (1151)
T KOG0206|consen 975 TADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWL 1054 (1151)
T ss_pred cCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHH
Confidence 9999999999999999999999999999999999999999999999999999864444443 444457788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHhCC
Q 003670 720 VTLFVVISTLIPYFAYSAIQMRFFPMYHGMIQWIRHEGQ 758 (804)
Q Consensus 720 ~~l~v~~~~ll~~~i~k~i~r~~~P~~~~ii~e~~~~~~ 758 (804)
+++++++++++|+++++++++.++|++++++||+++..+
T Consensus 1055 ~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~~~ 1093 (1151)
T KOG0206|consen 1055 TLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKYRR 1093 (1151)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhccc
Confidence 999999999999999999999999999999999997443
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.7e-126 Score=1155.47 Aligned_cols=720 Identities=37% Similarity=0.611 Sum_probs=609.2
Q ss_pred CCcCCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCC
Q 003670 1 MYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNT 80 (804)
Q Consensus 1 m~~~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (804)
|||+++++++.||+++++|+||||+|||||||||||+|+|+|++|+++|..|+.+....+.... +......
T Consensus 430 m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~-~~~~~~~-------- 500 (1178)
T PLN03190 430 MYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHA-GYSVEVD-------- 500 (1178)
T ss_pred cccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhh-ccccccc--------
Confidence 8999999999999999999999999999999999999999999999999999854322111100 0000000
Q ss_pred ccccccCCCCCCCcCcCchhhhccCC--CCCCChHHHHHHHHHHhhccceeeeecCC--C---CceEEecCCccHHHHHH
Q 003670 81 EEDLTESRPSVKGFNFKDERIANGNW--VNEPNSDVIQKFFRLLAVCHTAIPEVDEN--T---GKVMYEAESPDEAAFVI 153 (804)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~la~C~~~~~~~~~~--~---~~~~y~~~sp~e~Alv~ 153 (804)
+ .........+.|+.+.+... ...+..+.+++|++++|+||++.|+..++ . +.+.|+|+||||.||++
T Consensus 501 --~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~ 575 (1178)
T PLN03190 501 --G---KILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVY 575 (1178)
T ss_pred --c---ccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHH
Confidence 0 00000001112333332211 11123346789999999999999963221 1 34789999999999999
Q ss_pred HHHHcCcEEEeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhcc-C
Q 003670 154 AARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN-G 232 (804)
Q Consensus 154 ~a~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~ 232 (804)
+|+++|+.+..|+++.+.+...+. ...|++++++||+|+|||||||++++++++++||||||++|+++|+.. +
T Consensus 576 ~a~~~G~~l~~r~~~~i~i~~~~~------~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~ 649 (1178)
T PLN03190 576 AAAAYGFMLIERTSGHIVIDIHGE------RQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLN 649 (1178)
T ss_pred HHHHCCCeEecccCCeEEEeeccc------eecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhccccc
Confidence 999999999999999999887765 478999999999999999999999999999999999999999999764 3
Q ss_pred cccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeecccc
Q 003670 233 RDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQ 312 (804)
Q Consensus 233 ~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr 312 (804)
.+.++.+.+++++|+++|+||||+|||+++++|+.+|.++|++|+.++ .+|++.+++..+.+|+||+++|+++++|+||
T Consensus 650 ~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr 728 (1178)
T PLN03190 650 MNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQ 728 (1178)
T ss_pred chhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCc
Confidence 456788999999999999999999999999999999999999999998 8999999999999999999999999999999
Q ss_pred CChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhh
Q 003670 313 NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINE 392 (804)
Q Consensus 313 ~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 392 (804)
++++++|+.|++|||++||+|||+.+||++||++|||+.+++..+.++.+..+... +.+....... .....
T Consensus 729 ~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~-------~~l~~~~~~~--~~~~~ 799 (1178)
T PLN03190 729 QGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCR-------KSLEDALVMS--KKLTT 799 (1178)
T ss_pred hhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHH-------HHHHHHhhhh--hhccc
Confidence 99999999999999999999999999999999999999999988888765432211 1111110000 00000
Q ss_pred c----ccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecC
Q 003670 393 G----KNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGD 468 (804)
Q Consensus 393 ~----~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 468 (804)
. ..............+++++|.+|..++++++++.|.+++..|++|||||++|+||+++|+.+|+..+++|+||||
T Consensus 800 ~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGD 879 (1178)
T PLN03190 800 VSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGD 879 (1178)
T ss_pred cccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 0 000001112245678999999999999888888999999999999999999999999999999855789999999
Q ss_pred CcCChhhhhhcCcceeecCcchhhhhcccchhcchHhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003670 469 GANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTT 548 (804)
Q Consensus 469 G~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~ 548 (804)
|+||++|||+||||||++|+||+||+++|||+|.+|++|.+||++||||+|+|+++++.|+||||+++++++|||+++++
T Consensus 880 GaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~ 959 (1178)
T PLN03190 880 GANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTC 959 (1178)
T ss_pred CcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 003670 549 FSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKK 628 (804)
Q Consensus 549 ~s~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 628 (804)
|||+++|++|.+.+||++||++|++++|++|+|++++.++++|+||+.++++..++++.|+.|++.|+|||+++|++.++
T Consensus 960 fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~ 1039 (1178)
T PLN03190 960 FTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLF 1039 (1178)
T ss_pred CCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhcccccCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHH
Q 003670 629 AMEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFI 708 (804)
Q Consensus 629 ~~~~~~~~~~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~ 708 (804)
.+... ..+.+.+++++++++++++|+++++.+++|+|++++.+|+|+++|+++.+++..++. .. .|+.++
T Consensus 1040 ~~~~~-------~~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~-~~--~~~~~~ 1109 (1178)
T PLN03190 1040 AYWAS-------TIDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPT-LP--GYWAIF 1109 (1178)
T ss_pred HhcCC-------CcCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-ch--hHHHHH
Confidence 76532 223345678889999999999999999999999999999999999999999988763 22 245344
Q ss_pred HHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHhCCCCC
Q 003670 709 EALAPAPLFWLVTLFVVISTLIPYFAYSAIQMRFFPMYHGMIQWIRHEGQSND 761 (804)
Q Consensus 709 ~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i~r~~~P~~~~ii~e~~~~~~~~~ 761 (804)
.+..++.||+.++++++++++|++++++++|.|+|.+++++||.++....++
T Consensus 1110 -~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 1161 (1178)
T PLN03190 1110 -HIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGTFRE 1161 (1178)
T ss_pred -HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccccc
Confidence 5668999999999999999999999999999999999999999876655333
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=4.6e-117 Score=1087.54 Aligned_cols=719 Identities=52% Similarity=0.883 Sum_probs=617.2
Q ss_pred CCcCCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCC
Q 003670 1 MYYEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNT 80 (804)
Q Consensus 1 m~~~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (804)
||+++++++++||+++++|+||+|++||||||||||+|+|+|++|+++|..|+...++.........+...+.
T Consensus 336 m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~------- 408 (1057)
T TIGR01652 336 MYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVEN------- 408 (1057)
T ss_pred hhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccc-------
Confidence 7888888999999999999999999999999999999999999999999999865443322221111100000
Q ss_pred ccccccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeee-cCCCCceEEecCCccHHHHHHHHHHcC
Q 003670 81 EEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEV-DENTGKVMYEAESPDEAAFVIAARELG 159 (804)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~-~~~~~~~~y~~~sp~e~Alv~~a~~~g 159 (804)
+ .......+.++|.++++.+.....++..+.+++|++++++||++.++. ++.++.+.|+++||+|.||+++|+.+|
T Consensus 409 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g 485 (1057)
T TIGR01652 409 -E--NSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVG 485 (1057)
T ss_pred -c--ccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCC
Confidence 0 000001122456666665543333445567889999999999999976 333355889999999999999999999
Q ss_pred cEEEeecCCeE--EEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHH
Q 003670 160 FEFYQRTQTSI--SLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEV 237 (804)
Q Consensus 160 ~~~~~~~~~~i--~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~ 237 (804)
+.+.+|+++.+ .+...+. ...|++++++||+|+|||||||++++++++++|+||||++|+++|...+++.++
T Consensus 486 ~~~~~~~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~ 559 (1057)
T TIGR01652 486 FVFFERTPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNE 559 (1057)
T ss_pred CEEEEecCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHH
Confidence 99999998844 3443333 478999999999999999999999998899999999999999999865556778
Q ss_pred HHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHH
Q 003670 238 ETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPD 317 (804)
Q Consensus 238 ~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~ 317 (804)
.+.+++++|+.+|+|||++|||.++++|+.+|.++|.+|+.++ .+|++.++...+.+|+||+|+|++++|||||++|++
T Consensus 560 ~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~e 638 (1057)
T TIGR01652 560 ETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPE 638 (1057)
T ss_pred HHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHH
Confidence 8999999999999999999999999999999999999999988 799999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhccccc
Q 003670 318 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 397 (804)
Q Consensus 318 ~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (804)
+|+.|++||||+||+|||+.+||++||++||++.++...+.++.++.+..... .+.+.+ +........
T Consensus 639 tI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~----~~~i~~--------~~~~~~~~~ 706 (1057)
T TIGR01652 639 TIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSV----EAAIKF--------GLEGTSEEF 706 (1057)
T ss_pred HHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHH----HHHHHH--------HHHHHHHhh
Confidence 99999999999999999999999999999999998888888877643321100 011111 110000000
Q ss_pred ccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhh
Q 003670 398 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQ 477 (804)
Q Consensus 398 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 477 (804)
. .......++++++|++|+.+++++++++|.+++..|+++||||++|+||+++|+.+|+..|++|+|||||+||++||+
T Consensus 707 ~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk 785 (1057)
T TIGR01652 707 N-NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQ 785 (1057)
T ss_pred h-hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHh
Confidence 0 011245678999999999999888888999999999999999999999999999999844999999999999999999
Q ss_pred hcCcceeecCcchhhhhcccchhcchHhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccchH
Q 003670 478 EADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYND 557 (804)
Q Consensus 478 ~AdvGI~i~g~~~~~a~~aaD~~i~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~ 557 (804)
+||||||++|+|+.||+.+|||++.+|++|.++|++|||++|+|+++++.|.||||+++++++|||.++++|+|+++|++
T Consensus 786 ~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~ 865 (1057)
T TIGR01652 786 EADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEG 865 (1057)
T ss_pred hcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC
Q 003670 558 WFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFND 637 (804)
Q Consensus 558 ~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 637 (804)
|++++||++++++|++++|++|+|++++.++++|++|+.++++..++++.|+.|++.|++|++++|++.++.+.......
T Consensus 866 ~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 945 (1057)
T TIGR01652 866 WYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVS 945 (1057)
T ss_pred HHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888776544446
Q ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHccChHH
Q 003670 638 DGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLF 717 (804)
Q Consensus 638 ~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (804)
+|.+.+.+.+|+++|+++++++|+++++.+++|+|++++.+|+|+++++++.+++..+++ +...|++ +..+..+|.|
T Consensus 946 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~s~~f 1022 (1057)
T TIGR01652 946 SGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFP--SPAFYKA-APRVMGTFGF 1022 (1057)
T ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc--cccHHHH-HHHHHccHHH
Confidence 899999999999999999999999999999999999999999999999999999886542 3345554 4467789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHH
Q 003670 718 WLVTLFVVISTLIPYFAYSAIQMRFFPMYHGMIQW 752 (804)
Q Consensus 718 wl~~l~v~~~~ll~~~i~k~i~r~~~P~~~~ii~e 752 (804)
|+.++++++++++|+++++++++.|+|+.++++||
T Consensus 1023 ~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1023 WLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 99999999999999999999999999999999985
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-106 Score=861.86 Aligned_cols=661 Identities=33% Similarity=0.512 Sum_probs=570.5
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCc-hHHHHHhhhcCCCCccccccCCCCcc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGV-TEVERAMNRKKGSPLIDVVNGLNTEE 82 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (804)
...=.+..+|++++.|+||+|+++++|||||||+|+|+|+|++.+...|+.+. ++++....+-.+...
T Consensus 387 D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~----------- 455 (1051)
T KOG0210|consen 387 DKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGR----------- 455 (1051)
T ss_pred CCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCc-----------
Confidence 34445889999999999999999999999999999999999999999997653 334433321111000
Q ss_pred ccccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEE
Q 003670 83 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 162 (804)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~ 162 (804)
.-.++. ......+-+...++..+++|+||++.|..++ +|...||+.||||.|||+.....|..+
T Consensus 456 ------~~~~~~---------~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L 519 (1051)
T KOG0210|consen 456 ------NKGKGA---------LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKL 519 (1051)
T ss_pred ------cccccc---------chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEE
Confidence 000000 0112234556788999999999999997754 478999999999999999999999999
Q ss_pred EeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcC-CCeEEEEEcCchhHhHHHhhccCcccHHHHHH
Q 003670 163 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE-EGKILLLCKGADSVMFDRLAKNGRDFEVETRD 241 (804)
Q Consensus 163 ~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~ 241 (804)
..|+.+.+.++.+... ...|+||+++||+|+.|||.+|||++ .+++..|.||||.+|...... .+++++
T Consensus 520 ~~Rd~~~itL~~~~~~-----~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~-----NdWleE 589 (1051)
T KOG0210|consen 520 AKRDRHAITLRVPLDD-----ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY-----NDWLEE 589 (1051)
T ss_pred eecccceEEEecCCCc-----ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc-----chhhhh
Confidence 9999999999887554 68999999999999999999999997 789999999999999876644 356778
Q ss_pred HHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHH-hhhccceEeEEEeeeccccCChHHHHH
Q 003670 242 HVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTE-TIEKDLVLLGATAVEDKLQNGVPDCID 320 (804)
Q Consensus 242 ~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~ie~dl~llG~~~i~D~lr~~v~~~I~ 320 (804)
...++|++|+|||++|+|.++++||+.|.+.|++|+.++ .||++++..+.+ .+|+||+++|++|+||+||++|+.+++
T Consensus 590 E~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 590 ECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 888999999999999999999999999999999999999 889999999887 999999999999999999999999999
Q ss_pred HHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccC
Q 003670 321 KLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSAS 400 (804)
Q Consensus 321 ~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (804)
.||+|||||||||||+.|||+.||++.+|+..+..+..+..-..... ....++..
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~d------ah~eL~~l------------------- 723 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGD------AHNELNNL------------------- 723 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchH------HHHHHHHh-------------------
Confidence 99999999999999999999999999999999988888765432110 11111100
Q ss_pred CCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcC
Q 003670 401 GGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEAD 480 (804)
Q Consensus 401 ~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 480 (804)
......+++|+|.+|...++ .+.+.|.++.+.|.+|||||++|.||+++++++|++.++.|++||||.||++|||+||
T Consensus 724 -R~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~ 801 (1051)
T KOG0210|consen 724 -RRKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAAD 801 (1051)
T ss_pred -hcCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecc
Confidence 13457799999999998887 7889999999999999999999999999999999999999999999999999999999
Q ss_pred cceeecCcchhhhhcccchhcchHhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccchHHHH
Q 003670 481 IGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYNDWFL 560 (804)
Q Consensus 481 vGI~i~g~~~~~a~~aaD~~i~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~~ 560 (804)
+||||.|+||.||..||||.|.+|.++.+||++|||.+|+|.++...|.+.+++.+..++..|.....|...++|..+.|
T Consensus 802 ~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~Lm 881 (1051)
T KOG0210|consen 802 VGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLM 881 (1051)
T ss_pred cceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCc
Q 003670 561 SLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFNDDGK 640 (804)
Q Consensus 561 ~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~ 640 (804)
..|..++|.+|++.+ +.|+|++++..+.||+|||+-.+++.++.+.|+.|++.++||+.++.++.+..+..
T Consensus 882 vgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~-------- 952 (1051)
T KOG0210|consen 882 VGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT-------- 952 (1051)
T ss_pred HHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh--------
Confidence 999999999999999 66999999999999999999999999999999999999999999998887666553
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHccChHHHHH
Q 003670 641 TVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLV 720 (804)
Q Consensus 641 ~~~~~~~~t~~ft~~v~~~n~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~ 720 (804)
++....++.|+++++...+.+++++++|+|...+.-..|++++++.+.+.. .+ +-....+++.|++-
T Consensus 953 --ef~~ivaisFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yivsl~~l~-------~y----fd~~f~~~~~Fl~k 1019 (1051)
T KOG0210|consen 953 --EFIHIVAISFTALILTELIMVALTVRTWHWLMVVAELLSLALYIVSLAFLH-------EY----FDRYFILTYVFLWK 1019 (1051)
T ss_pred --hheEeeeeeeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH-------hH----HHHHHHHHHHHHHH
Confidence 223456889999999999999999999999988777777777666544332 11 11122356667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHH
Q 003670 721 TLFVVISTLIPYFAYSAIQMRFFPMYHGMIQ 751 (804)
Q Consensus 721 ~l~v~~~~ll~~~i~k~i~r~~~P~~~~ii~ 751 (804)
+.++.+++++|.++.|+++|++.|..|.+++
T Consensus 1020 ~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 1020 VTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 7888899999999999999999999998876
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-83 Score=774.25 Aligned_cols=557 Identities=31% Similarity=0.478 Sum_probs=445.2
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+.+++++++|+++++|+||++++||||||||||+|+|+|.+|++.+. +...+
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~--~~~~~-------------------------- 379 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG--GKDID-------------------------- 379 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--ccccc--------------------------
Confidence 45789999999999999999999999999999999999999998851 00000
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
+ ......+...+++.++++||++.+..+ . .+..+||+|.||++++.+.|+.+
T Consensus 380 --------------~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~- 431 (917)
T COG0474 380 --------------D--------KDLKDSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL- 431 (917)
T ss_pred --------------c--------cccccchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-
Confidence 0 011123345589999999999988765 3 67789999999999999998744
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhc------cCcccHH
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAK------NGRDFEV 237 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~ 237 (804)
.+ ......|++++.+||||+|||||||++..+++++++|||||++|+++|+. ..++.++
T Consensus 432 ~~---------------~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~ 496 (917)
T COG0474 432 DL---------------SGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLR 496 (917)
T ss_pred CH---------------HHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHH
Confidence 10 01235678899999999999999999988888999999999999999985 2345678
Q ss_pred HHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHH
Q 003670 238 ETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPD 317 (804)
Q Consensus 238 ~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~ 317 (804)
.+.+..++|+++|||||++|||.++.++.. +.. +.+|+||+|+|+++++||||++|++
T Consensus 497 ~~~~~~~~la~~glRvla~A~k~~~~~~~~---------------------~~~-~~~E~dl~~lGl~g~~Dppr~~v~~ 554 (917)
T COG0474 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKD---------------------DEV-DEIESDLVFLGLTGIEDPPREDVKE 554 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCccccc---------------------chh-hhhhccceeehhhhccCCCCccHHH
Confidence 899999999999999999999977654311 111 6789999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhccccc
Q 003670 318 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 397 (804)
Q Consensus 318 ~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (804)
+|+.|++|||++||+|||+.+||++||++||+..+..
T Consensus 555 aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~------------------------------------------- 591 (917)
T COG0474 555 AIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE------------------------------------------- 591 (917)
T ss_pred HHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCC-------------------------------------------
Confidence 9999999999999999999999999999999754221
Q ss_pred ccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhh
Q 003670 398 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQ 477 (804)
Q Consensus 398 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 477 (804)
. .++++|.+|+.+.+++ +.+....+. ||||++|+||.++|+.+|+ .|++|+|+|||+||+||||
T Consensus 592 --------~-~~vi~G~el~~l~~~e----l~~~~~~~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk 655 (917)
T COG0474 592 --------S-ALVIDGAELDALSDEE----LAELVEELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALK 655 (917)
T ss_pred --------c-eeEeehHHhhhcCHHH----HHHHhhhCc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHH
Confidence 0 5689999999877764 444444555 9999999999999999999 7999999999999999999
Q ss_pred hcCcceeecCcchhhhhcccchhcchHhh-HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccch
Q 003670 478 EADIGIGISGVEGMQAVMSSDIAIAQFRY-LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYN 556 (804)
Q Consensus 478 ~AdvGI~i~g~~~~~a~~aaD~~i~~f~~-l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~ 556 (804)
+|||||||++.....|+.+||+++.++++ .....+.|||++|.|+++++.|.+++|+..+++++++.+++.+ ..+++
T Consensus 656 ~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~ 733 (917)
T COG0474 656 AADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLT 733 (917)
T ss_pred hcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHH
Confidence 99999999765555588999999998666 4444599999999999999999999999999999999988766 56799
Q ss_pred HHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-
Q 003670 557 DWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAF- 635 (804)
Q Consensus 557 ~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~- 635 (804)
++|++|+|++++++|++++|+++ ++ ...+++| +++++..+|+++.++.|++...++.++++++.+..+.....
T Consensus 734 ~~qll~inll~d~~pa~~L~~~~--~~-~~~m~~~---~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~ 807 (917)
T COG0474 734 PLQLLWINLLTDSLPALALGVED--PE-SDVMKRP---PRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIA 807 (917)
T ss_pred HHHHHHHHHHHhhhhhheeecCC--Cc-ccccccC---CCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999976 33 3344444 23788889999999999888888888777666655442211
Q ss_pred CCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhcch------hHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHH
Q 003670 636 NDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFT------LIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIE 709 (804)
Q Consensus 636 ~~~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~~~~~------~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~ 709 (804)
...+.........+++|+.+++++.+..+.....|. ++.+..+|+++++..++.++..++|+.... .|.
T Consensus 808 ~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~-----~f~ 882 (917)
T COG0474 808 NTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLK-----IFQ 882 (917)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhh-----hcc
Confidence 112221124567789999999888887766554422 346788888888888888887777743211 444
Q ss_pred HHccChHHHHHHHHHH
Q 003670 710 ALAPAPLFWLVTLFVV 725 (804)
Q Consensus 710 ~~~~~~~~wl~~l~v~ 725 (804)
..+.+...|+..+++.
T Consensus 883 ~~~~~~~~~~~~~~~~ 898 (917)
T COG0474 883 PTPLSLFEWLIAIAVA 898 (917)
T ss_pred CCCCcHHHHHHHHHHH
Confidence 5555666677665554
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-81 Score=691.09 Aligned_cols=614 Identities=21% Similarity=0.275 Sum_probs=474.5
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
++++++++||.+..+|+||.+++||||||||||+|+|.+.++++.+..+..- ++ ..
T Consensus 312 rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-~~--f~--------------------- 367 (972)
T KOG0202|consen 312 RMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-DE--FN--------------------- 367 (972)
T ss_pred HHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-cc--cc---------------------
Confidence 5789999999999999999999999999999999999999999987654322 00 00
Q ss_pred cccCCCCCCCcCcCchhhhccCCC--CCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWV--NEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFE 161 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~ 161 (804)
+....++..++...+.... ..-+.+.++++..+.++||.+..+.++. +.++- .+.|.|.||..++.++|+.
T Consensus 368 -----~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~ 440 (972)
T KOG0202|consen 368 -----PTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLP 440 (972)
T ss_pred -----cCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCC
Confidence 0000111111111111111 2335677999999999999998877664 33222 3689999999999999986
Q ss_pred EEeec-CCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCe--EEEEEcCchhHhHHHhhcc-------
Q 003670 162 FYQRT-QTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGK--ILLLCKGADSVMFDRLAKN------- 231 (804)
Q Consensus 162 ~~~~~-~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~------- 231 (804)
-.... .+.. + +..+.+...+.++...++||+|+||+|||.+.++.++ ..+|+|||+|.|+++|+..
T Consensus 441 ~~~~~~~s~~---~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~ 516 (972)
T KOG0202|consen 441 GTRSTNLSNE---E-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQT 516 (972)
T ss_pred cchhhccccc---c-cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCce
Confidence 54311 1111 1 1122233345667779999999999999999987664 8999999999999999543
Q ss_pred ----CcccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHH--HHHhhhccceEeEEE
Q 003670 232 ----GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDE--VTETIEKDLVLLGAT 305 (804)
Q Consensus 232 ----~~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~ie~dl~llG~~ 305 (804)
.+..++.+.+...+++.+|+|+|++|+++.+.. ...+..+++ .+...|+||+|+|++
T Consensus 517 ~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~-----------------~~~~~~l~~~s~~~~~E~~LtFvGlV 579 (972)
T KOG0202|consen 517 KVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQ-----------------VPDDQDLNDTSNRATAESDLTFVGLV 579 (972)
T ss_pred eeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCccc-----------------ChhhhhhcccccccccccceEEEEEe
Confidence 234678889999999999999999999976631 000111111 245789999999999
Q ss_pred eeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhh
Q 003670 306 AVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKES 385 (804)
Q Consensus 306 ~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~ 385 (804)
|+.||+|++|+++|+.|++|||+|.|+|||+.+||.+||+++|+...+..
T Consensus 580 Gi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed------------------------------ 629 (972)
T KOG0202|consen 580 GILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED------------------------------ 629 (972)
T ss_pred eccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc------------------------------
Confidence 99999999999999999999999999999999999999999998754321
Q ss_pred HHHHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEE
Q 003670 386 VLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLA 465 (804)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vla 465 (804)
--...++|++++.+-++++.+... +..+|+|++|++|..||+.||+ .|++|+|
T Consensus 630 --------------------~~~~~~TG~efD~ls~~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAM 682 (972)
T KOG0202|consen 630 --------------------VSSMALTGSEFDDLSDEELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAM 682 (972)
T ss_pred --------------------ccccccchhhhhcCCHHHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEe
Confidence 012367788887665544443322 3459999999999999999999 8999999
Q ss_pred ecCCcCChhhhhhcCcceeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 003670 466 IGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLY 543 (804)
Q Consensus 466 iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~ 543 (804)
.|||.||.|+||.|||||||+-+....||+|||+++.|++| +... +.+||.+|.|+++++.|.+..|+....++|+.
T Consensus 683 TGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaA-VEEGr~IynNik~Fir~~lSsnVgev~~I~l~ 761 (972)
T KOG0202|consen 683 TGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAA-VEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLT 761 (972)
T ss_pred cCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 99999999999999999999534555599999999999777 5555 89999999999999999999999999988888
Q ss_pred HHhhcCCCcccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHH
Q 003670 544 EAYTTFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIF 623 (804)
Q Consensus 544 ~~~~~~s~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 623 (804)
..+. -..+++++|++|+|++++.+|+.++|+++ ++++.+++.|+ .++..+++++.|+.++..|+|.++++.
T Consensus 762 aa~~---~p~pL~pvQiLWiNlvtDG~PA~aLG~ep--~D~DiM~kpPR----~~~~~iit~~l~~r~l~~g~~vg~~Tv 832 (972)
T KOG0202|consen 762 AAFG---IPEPLIPVQILWINLVTDGPPATALGFEP--VDPDIMKKPPR----DSKDGIITGWLIFRYLAIGIIVGVATV 832 (972)
T ss_pred HHhC---CCCcccchhhheeeeeccCCchhhcCCCC--CChhHHhCCCC----CCCCCeeeHHHHHHHHHhheeeeeeEh
Confidence 8773 23469999999999999999999999975 67888888887 778899999999999999999998877
Q ss_pred HHHHHhhccc--ccCC----------------CCccchhhhHHHHHHHHHHHHHHHHHHHHhhcc-------hhHHHHHH
Q 003670 624 FFCKKAMEHQ--AFND----------------DGKTVGRDIFGATMYTCIVWVVNLQLALAISYF-------TLIQHIFI 678 (804)
Q Consensus 624 ~~~~~~~~~~--~~~~----------------~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~~~~-------~~~~~~~i 678 (804)
+.+...+.+. ...+ +...+......||.|+++++.-.+... ...++ +.|.|.++
T Consensus 833 ~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL-~~~se~~slf~~~~~~N~~l 911 (972)
T KOG0202|consen 833 GVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNAL-NCLSENKSLFTMPPWSNRWL 911 (972)
T ss_pred HhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHh-hcccCCcceEEecccccHHH
Confidence 6666554421 1100 001111112237788888775544433 33333 47889899
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 003670 679 WGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAIQMRFF 743 (804)
Q Consensus 679 ~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i~r~~~ 743 (804)
.+++++.++.+++..|+|+ ++. .|...++++..|++++.+....++.++++|++.|.+.
T Consensus 912 ~~ai~~S~~~~f~ilYvp~-l~~-----iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 912 LWAIALSFVLHFLVLYVPP-LQR-----IFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHHHHHHhhheEEEech-hhh-----hheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 9999999999999999996 455 7778899999999999999999999999999999874
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=4.3e-77 Score=723.92 Aligned_cols=645 Identities=17% Similarity=0.209 Sum_probs=458.6
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCe-ecCCCchHHHHHhhhcCCCCccccccCCCCcc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGT-AYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 82 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (804)
++++++++||+++++|+||.+++||+|||||||+|+|++.++++++. .|.....+... ....|.... ...
T Consensus 339 rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~--~~~~g~~~~-----~~~-- 409 (1053)
T TIGR01523 339 NMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAF--NPNEGNVSG-----IPR-- 409 (1053)
T ss_pred HHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCC--CCccccccc-----ccc--
Confidence 45788999999999999999999999999999999999999998752 22100000000 000000000 000
Q ss_pred ccccCCCCCCCcCcCchhhhcc--------CCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHH
Q 003670 83 DLTESRPSVKGFNFKDERIANG--------NWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIA 154 (804)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~ 154 (804)
. ...........++.+... ....+.+.+.+++++.++++||++....++..+.+. ..++|+|.||+.+
T Consensus 410 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~ 485 (1053)
T TIGR01523 410 -F--SPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVF 485 (1053)
T ss_pred -c--ccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHH
Confidence 0 000000000000000000 000001224567899999999998775433223222 2479999999999
Q ss_pred HHHcCcEEEee-c--------CCe-EEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCC-eEEEEEcCchhH
Q 003670 155 ARELGFEFYQR-T--------QTS-ISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEG-KILLLCKGADSV 223 (804)
Q Consensus 155 a~~~g~~~~~~-~--------~~~-i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~ 223 (804)
|.+.|+..... + +.. ..+..... +.....|+++..+||||+|||||++++++++ ++++|+||||+.
T Consensus 486 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~ 562 (1053)
T TIGR01523 486 AKKFDLPHNALTGEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFER 562 (1053)
T ss_pred HHHcCCCcccccchhhhhhhccccccccccccc---cccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHH
Confidence 99999743100 0 000 00000000 0113568999999999999999999997654 588999999999
Q ss_pred hHHHhhcc-----------CcccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHH
Q 003670 224 MFDRLAKN-----------GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVT 292 (804)
Q Consensus 224 i~~~~~~~-----------~~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~ 292 (804)
|+++|+.. .++.++.+.+++++|+++|+|||++|||.++.+++..+ .+. ... .+ .
T Consensus 563 il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~---~~~-~~--------~ 628 (1053)
T TIGR01523 563 IIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLK---NET-LN--------R 628 (1053)
T ss_pred HHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhh---ccc-cc--------h
Confidence 99999742 12346678889999999999999999999987654211 000 000 01 2
Q ss_pred HhhhccceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhh
Q 003670 293 ETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKT 372 (804)
Q Consensus 293 ~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~ 372 (804)
+.+|+||+|+|+++++||+|++++++|+.|+++||+|||+|||+.+||.+||++|||+..+.. ...+
T Consensus 629 ~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~---~~~~---------- 695 (1053)
T TIGR01523 629 ATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI---HDRD---------- 695 (1053)
T ss_pred hhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc---cccc----------
Confidence 357899999999999999999999999999999999999999999999999999999864311 0000
Q ss_pred chhHHHHHHhhhhHHHHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHH
Q 003670 373 GAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVT 452 (804)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv 452 (804)
......+++|.+++.+.++++.+. .. ...||||++|+||..+|
T Consensus 696 -------------------------------~~~~~~vitG~~l~~l~~~~l~~~----~~--~~~V~ar~sP~~K~~iV 738 (1053)
T TIGR01523 696 -------------------------------EIMDSMVMTGSQFDALSDEEVDDL----KA--LCLVIARCAPQTKVKMI 738 (1053)
T ss_pred -------------------------------ccccceeeehHHhhhcCHHHHHHH----hh--cCeEEEecCHHHHHHHH
Confidence 001236899999987665444332 22 34599999999999999
Q ss_pred HHHHccCCCeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccchhcch--HhhHHHHHHHhhccchhhhhHHHHHHH
Q 003670 453 RLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFF 530 (804)
Q Consensus 453 ~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~--f~~l~~lll~~Gr~~~~~i~~~i~~~~ 530 (804)
+.+|+ .|++|+|+|||+||++||++|||||+|+......|+++||+++.+ |..+.++ +.|||++|+|+++++.|.+
T Consensus 739 ~~lq~-~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l 816 (1053)
T TIGR01523 739 EALHR-RKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLL 816 (1053)
T ss_pred HHHHh-cCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 99998 799999999999999999999999998523333499999999998 6668888 8999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcc--cchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHH
Q 003670 531 YKNITFGLSVFLYEAYTTFSGQP--AYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRI 608 (804)
Q Consensus 531 ~~ni~~~~~~~~~~~~~~~s~~~--~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~ 608 (804)
++|+..+++.+++.++..++|.+ +++++|++|+|++++.+|++++|++ +++++.+.+.|+ .+...+++++.+
T Consensus 817 ~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e--~~~~~~m~~~Pr----~~~~~l~~~~~~ 890 (1053)
T TIGR01523 817 AENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLE--KAAPDLMDRLPH----DNEVGIFQKELI 890 (1053)
T ss_pred HHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccC--CCChhHHhcCCC----CCCccccCHHHH
Confidence 99999999999999988777764 5789999999999999999999985 367777777776 456679999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc---cccC-----CCCcc-chhhhHHHHHHHHHHHHHHHHHHHHhhc----ch----
Q 003670 609 FGWMFNGLYSAIIIFFFCKKAMEH---QAFN-----DDGKT-VGRDIFGATMYTCIVWVVNLQLALAISY----FT---- 671 (804)
Q Consensus 609 ~~~~~~~~~~~~~~f~~~~~~~~~---~~~~-----~~g~~-~~~~~~~t~~ft~~v~~~n~~~~l~~~~----~~---- 671 (804)
..+++.|++.+++++..+++.+.. .... ..+.. .+.....|++|+++++...++.+..... |.
T Consensus 891 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~ 970 (1053)
T TIGR01523 891 IDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGI 970 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCcc
Confidence 889999999888777655432211 0000 00000 1233456788888887766554321111 21
Q ss_pred -------------hHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHH
Q 003670 672 -------------LIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAI 738 (804)
Q Consensus 672 -------------~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i 738 (804)
.+.|..+|+++++.++++++..|+|+. +. .+|...++++ .|+.++.++++.++..+++|++
T Consensus 971 ~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~-~~----~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~ 1044 (1053)
T TIGR01523 971 PDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVI-ND----DVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCG 1044 (1053)
T ss_pred ccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhh-hh----hhhccCCcch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 247888999999999999888898852 31 1566676775 8988888888899999999999
Q ss_pred HHhh
Q 003670 739 QMRF 742 (804)
Q Consensus 739 ~r~~ 742 (804)
+|++
T Consensus 1045 ~r~~ 1048 (1053)
T TIGR01523 1045 KRRL 1048 (1053)
T ss_pred HHhc
Confidence 8765
No 8
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.3e-76 Score=714.31 Aligned_cols=613 Identities=21% Similarity=0.241 Sum_probs=456.8
Q ss_pred CCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccc
Q 003670 5 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 84 (804)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (804)
.+++++++|+++++|+||++++||||||||||+|+|++.+++..+..+.... .. ...+.
T Consensus 270 m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~~-----~~~~~--------------- 328 (917)
T TIGR01116 270 MAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-EF-----CVTGT--------------- 328 (917)
T ss_pred HHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-eE-----EecCC---------------
Confidence 4678999999999999999999999999999999999999987654321000 00 00000
Q ss_pred ccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEe
Q 003670 85 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQ 164 (804)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~ 164 (804)
++...+..+.+.......+.+..+++++++++||++.+..++..+.+.. .++|+|.||++++.+.|+....
T Consensus 329 --------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~-~gdp~E~ALl~~~~~~g~~~~~ 399 (917)
T TIGR01116 329 --------TYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK-VGEATEAALKVLVEKMGLPATK 399 (917)
T ss_pred --------ccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee-ccChhHHHHHHHHHHcCCCchh
Confidence 0000000000000011122345778999999999987754433332222 3799999999999999987765
Q ss_pred ecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhcc----------Ccc
Q 003670 165 RTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN----------GRD 234 (804)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~ 234 (804)
+.++.+.....+.. ...+..|++++.+||||+||||||+++++ +++.+|+||||+.|+++|+.. +++
T Consensus 400 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~ 476 (917)
T TIGR01116 400 NGVSSKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDK 476 (917)
T ss_pred cccccccccccchh--HHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCeeeCCHH
Confidence 54443333222110 01235688999999999999999999964 668999999999999999742 123
Q ss_pred cHHHHHHHHHHHHh-ccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccC
Q 003670 235 FEVETRDHVNKYAD-AGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQN 313 (804)
Q Consensus 235 ~~~~~~~~l~~~~~-~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~ 313 (804)
.++.+.+++++|++ +|+|||++|||.+++++... . . .+ ....+.+|+||+|+|+++++||+|+
T Consensus 477 ~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~---------~-~~-----~~~~~~~e~~l~~lGl~~~~Dplr~ 540 (917)
T TIGR01116 477 MKNTILSVIKEMGTTKALRCLALAFKDIPDPREED-L---------L-SD-----PANFEAIESDLTFIGVVGMLDPPRP 540 (917)
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEEEECCcccccc-c---------c-cc-----chhhhhhcCCcEEEEEeeeeCCCch
Confidence 45678889999999 99999999999987643210 0 0 01 0123568999999999999999999
Q ss_pred ChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhc
Q 003670 314 GVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEG 393 (804)
Q Consensus 314 ~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 393 (804)
+++++|+.|+++||++||+|||+.+||.++|+++|+..++..+.
T Consensus 541 ~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~------------------------------------ 584 (917)
T TIGR01116 541 EVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT------------------------------------ 584 (917)
T ss_pred hHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc------------------------------------
Confidence 99999999999999999999999999999999999976442210
Q ss_pred ccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCCh
Q 003670 394 KNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDV 473 (804)
Q Consensus 394 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~ 473 (804)
...++|..+..+.+++.. . ..++.+||||++|+||..+|+.+|+ .|++|+|+|||.||+
T Consensus 585 --------------~~~~~g~~l~~~~~~~~~----~--~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~va~iGDG~ND~ 643 (917)
T TIGR01116 585 --------------FKSFTGREFDEMGPAKQR----A--ACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDA 643 (917)
T ss_pred --------------ceeeeHHHHhhCCHHHHH----H--hhhcCeEEEecCHHHHHHHHHHHHh-cCCeEEEecCCcchH
Confidence 124566665543332221 1 2345679999999999999999997 899999999999999
Q ss_pred hhhhhcCcceeecCcchhhhhcccchhcch--HhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 003670 474 GMLQEADIGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSG 551 (804)
Q Consensus 474 ~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~--f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~ 551 (804)
+||++|||||+|+ .....|+.+||+++.+ |+.+.++ +.|||.+|.|+++++.|.+++|+..+++.+++.++. .
T Consensus 644 ~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~ 718 (917)
T TIGR01116 644 PALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG---I 718 (917)
T ss_pred HHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc---C
Confidence 9999999999994 2233488999999999 7778888 799999999999999999999999999999987763 2
Q ss_pred cccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003670 552 QPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAME 631 (804)
Q Consensus 552 ~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 631 (804)
..++++++++|+|++++.+|+++++.++ ++++.+.++|+ .++++++++++++.|++.|+++++++++.+.+.+.
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~--~~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 792 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNP--PDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYL 792 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCC--cchhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2569999999999999999999999865 45777777776 45778999999999999999999886655443332
Q ss_pred c-cccCC-----------CCcc----chhhhHHHHHHHHHHHHHHHHHHHHhhc----c--hhHHHHHHHHHHHHHHHHH
Q 003670 632 H-QAFND-----------DGKT----VGRDIFGATMYTCIVWVVNLQLALAISY----F--TLIQHIFIWGSIALWYLFM 689 (804)
Q Consensus 632 ~-~~~~~-----------~g~~----~~~~~~~t~~ft~~v~~~n~~~~l~~~~----~--~~~~~~~i~~si~~~~i~~ 689 (804)
. ..... ++.. .+.....|++|+++++.+.++.+...+. | ..+.|..+|+++++.++++
T Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~ 872 (917)
T TIGR01116 793 LTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALH 872 (917)
T ss_pred hcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHH
Confidence 1 11000 1100 0123456889999988776666543321 2 1246788888888888888
Q ss_pred HHHhhcCCCCCcchHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003670 690 LAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAIQM 740 (804)
Q Consensus 690 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i~r 740 (804)
++..++|+ ++. +|...++++..|+.+++++++.++.+.+.|+++|
T Consensus 873 ~~~~~v~~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 873 FLILYVPF-LSR-----IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHhHH-HHH-----HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888884 343 7778889999999999999999999999998764
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.4e-75 Score=711.17 Aligned_cols=609 Identities=19% Similarity=0.214 Sum_probs=457.3
Q ss_pred CCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccc
Q 003670 5 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 84 (804)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (804)
.+++++++|+++.+|+||++++||||||||||+|+|+|.++++++..|.....+ .
T Consensus 325 m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-----------~-------------- 379 (997)
T TIGR01106 325 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE-----------D-------------- 379 (997)
T ss_pred HHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCcc-----------C--------------
Confidence 467899999999999999999999999999999999999999988765421100 0
Q ss_pred ccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCC--CceEEecCCccHHHHHHHHHHcCcEE
Q 003670 85 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENT--GKVMYEAESPDEAAFVIAARELGFEF 162 (804)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~--~~~~y~~~sp~e~Alv~~a~~~g~~~ 162 (804)
..+. ..+.+....+.+++++++||++.+..+... -.-.+..++|+|.||++++.+.+...
T Consensus 380 ------~~~~------------~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~ 441 (997)
T TIGR01106 380 ------QSGV------------SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV 441 (997)
T ss_pred ------CCCc------------cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH
Confidence 0000 001122345678899999999877533211 01124468999999999998654211
Q ss_pred EeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcC---CCeEEEEEcCchhHhHHHhhcc--------
Q 003670 163 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE---EGKILLLCKGADSVMFDRLAKN-------- 231 (804)
Q Consensus 163 ~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~-------- 231 (804)
. ..+..|+++..+||+|+||||+++++.. ++++++|+||||+.|+++|+..
T Consensus 442 ~------------------~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~ 503 (997)
T TIGR01106 442 M------------------EMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQP 503 (997)
T ss_pred H------------------HHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCccc
Confidence 0 0135688899999999999999998643 3568999999999999999742
Q ss_pred -CcccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHH-HHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeec
Q 003670 232 -GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKV-FNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVED 309 (804)
Q Consensus 232 -~~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D 309 (804)
.++.++.+.+++++|+++|+||+++|||.++++++.. |. .+++ ..+.+|+||+|+|+++++|
T Consensus 504 l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~-----------~~~~-----~~~~~e~~L~flGli~i~D 567 (997)
T TIGR01106 504 LDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQ-----------FDTD-----DVNFPTDNLCFVGLISMID 567 (997)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCccccccccc-----------ccch-----hhhccccCcEEEEEEeccC
Confidence 1234567888899999999999999999998765432 11 0111 1134589999999999999
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 389 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 389 (804)
|+|++|+++|++|+++||+++|+|||+..||.++|+++|++.++.... + .+. .+
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~----~-----~i~-----------------~~ 621 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETV----E-----DIA-----------------AR 621 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccch----h-----hhh-----------------hh
Confidence 999999999999999999999999999999999999999987653210 0 000 00
Q ss_pred hhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCC
Q 003670 390 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDG 469 (804)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 469 (804)
+....... +......++++|.+++.+.+++ +.++...+..+||||++|+||..+|+.+|+ .|++|+|+|||
T Consensus 622 ~~~~~~~~----~~~~~~~~vi~G~~l~~l~~~e----l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG 692 (997)
T TIGR01106 622 LNIPVSQV----NPRDAKACVVHGSDLKDMTSEQ----LDEILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDG 692 (997)
T ss_pred cccccccc----ccccccceEEEhHHhhhCCHHH----HHHHHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCC
Confidence 00000000 0111234799999998876654 444555566789999999999999999998 89999999999
Q ss_pred cCChhhhhhcCcceeec--Ccchhhhhcccchhcch--HhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 003670 470 ANDVGMLQEADIGIGIS--GVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEA 545 (804)
Q Consensus 470 ~ND~~ml~~AdvGI~i~--g~~~~~a~~aaD~~i~~--f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~ 545 (804)
+||++||++|||||+|+ |.+. |+++||+++.+ |..+.++ +.|||.+|.|+++++.|.+++|+..+++.+++.+
T Consensus 693 ~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~ 769 (997)
T TIGR01106 693 VNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFII 769 (997)
T ss_pred cccHHHHhhCCcceecCCcccHH--HHHhhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999985 4444 89999999999 6668888 9999999999999999999999999999999988
Q ss_pred hhcCCCcccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHH-HHHHHHHHHHHH
Q 003670 546 YTTFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWM-FNGLYSAIIIFF 624 (804)
Q Consensus 546 ~~~~s~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~ 624 (804)
+.. ..+++++|++|+|++++++|+++++.+ +++++.+.++|+ ..+...++++++++.|+ ..|++++++.|+
T Consensus 770 ~~~---~~pl~~~qlL~inli~d~lp~~al~~e--~~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~ 841 (997)
T TIGR01106 770 ANI---PLPLGTITILCIDLGTDMVPAISLAYE--KAESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFF 841 (997)
T ss_pred HcC---cchhHHHHHHHHHHHHHHHHHHHHhcC--CCCcccccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 753 345889999999999999999999984 467788888887 22356888888887765 558899988776
Q ss_pred HHHHhhcccc------cCC---------CCc--cc-----------hhhhHHHHHHHHHHHHHHHHHHHHhh-cch----
Q 003670 625 FCKKAMEHQA------FND---------DGK--TV-----------GRDIFGATMYTCIVWVVNLQLALAIS-YFT---- 671 (804)
Q Consensus 625 ~~~~~~~~~~------~~~---------~g~--~~-----------~~~~~~t~~ft~~v~~~n~~~~l~~~-~~~---- 671 (804)
.+++.+...+ +.. ++. .. ......|++|+++++++.+....... +.+
T Consensus 842 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~ 921 (997)
T TIGR01106 842 TYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQ 921 (997)
T ss_pred HHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCccccccc
Confidence 6654332111 100 000 00 00146789999999987776654322 212
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003670 672 LIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAIQMRF 742 (804)
Q Consensus 672 ~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i~r~~ 742 (804)
.+.|..+|+++++.+++.++..++|+ ++. +|+..++++.+|+.++.++++.++...+.|+++|++
T Consensus 922 ~~~n~~l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 922 GMKNKILIFGLFEETALAAFLSYCPG-MGV-----ALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHhhh-hHH-----HhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 15677888888888888777778874 344 777888999999999999999999999999988764
No 10
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-76 Score=648.66 Aligned_cols=570 Identities=23% Similarity=0.331 Sum_probs=451.0
Q ss_pred CCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccc
Q 003670 5 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 84 (804)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (804)
+-+.+.+||.+.++|++|..++||+|||||||.|+|++.+.++++..|...... .
T Consensus 416 MmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~-~------------------------ 470 (1034)
T KOG0204|consen 416 MMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPK-S------------------------ 470 (1034)
T ss_pred HhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcc-c------------------------
Confidence 446688999999999999999999999999999999999999988776432110 0
Q ss_pred ccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEe
Q 003670 85 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQ 164 (804)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~ 164 (804)
..-.+.....++...+...+-....++..+...-+.+||.|.||+.++..+|..+..
T Consensus 471 -----------------------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~ 527 (1034)
T KOG0204|consen 471 -----------------------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD 527 (1034)
T ss_pred -----------------------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh
Confidence 001122333445555544433333333334334456899999999999999987654
Q ss_pred ecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhcc----------Ccc
Q 003670 165 RTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN----------GRD 234 (804)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~ 234 (804)
.+.+.++++++||+|.||||+++++.+++..++|+|||.|.++..|+.. +++
T Consensus 528 ------------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~ 589 (1034)
T KOG0204|consen 528 ------------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNED 589 (1034)
T ss_pred ------------------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHH
Confidence 2466788999999999999999999988772399999999999999874 344
Q ss_pred cHHHHHHHHHHHHhccceEEEEEEEeCCHH--HHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeecccc
Q 003670 235 FEVETRDHVNKYADAGLRTLILAYRVLDEE--EYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQ 312 (804)
Q Consensus 235 ~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~--e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr 312 (804)
.+..+++.++.|+++|+|++|+|||++.+. +..+|.. .+..+.+++++|+++|+||.|
T Consensus 590 ~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvR 649 (1034)
T KOG0204|consen 590 DRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVR 649 (1034)
T ss_pred HHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCC
Confidence 556889999999999999999999996543 1111211 135678999999999999999
Q ss_pred CChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhh
Q 003670 313 NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINE 392 (804)
Q Consensus 313 ~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 392 (804)
||||++|+.|++|||+|.|+|||+..||.+||.+|||++++..
T Consensus 650 PgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d------------------------------------- 692 (1034)
T KOG0204|consen 650 PGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD------------------------------------- 692 (1034)
T ss_pred CCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc-------------------------------------
Confidence 9999999999999999999999999999999999999987643
Q ss_pred cccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCC
Q 003670 393 GKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGAND 472 (804)
Q Consensus 393 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND 472 (804)
.+.+.|+++..+-+.+..+...++. |.+|.+|.+|..+|+.+++ .|++|+..|||.||
T Consensus 693 ---------------~~~lEG~eFr~~s~ee~~~i~pkl~------VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTND 750 (1034)
T KOG0204|consen 693 ---------------FLALEGKEFRELSQEERDKIWPKLR------VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTND 750 (1034)
T ss_pred ---------------cceecchhhhhcCHHHHHhhhhhhe------eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCC
Confidence 2356677777655555555555443 9999999999999999997 89999999999999
Q ss_pred hhhhhhcCcceeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 003670 473 VGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFS 550 (804)
Q Consensus 473 ~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s 550 (804)
.|+|++||||.||+=+....|+++||++|+|++| +++. +.+||..|.+++|+++|.+.-|++...+.|...+..
T Consensus 751 aPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~-v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~--- 826 (1034)
T KOG0204|consen 751 APALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKA-VKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACAT--- 826 (1034)
T ss_pred chhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHH-HHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhc---
Confidence 9999999999987433333499999999999777 7777 899999999999999999999999888888877765
Q ss_pred CcccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003670 551 GQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAM 630 (804)
Q Consensus 551 ~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 630 (804)
+..++++.|++|.|++++.|.+++++.++ +.++++++.|. |++.++++..++-.++.+++||-+++|.+.+...
T Consensus 827 ~dsPLtAVQlLWVNLIMDTLgALALATep--Pt~~Lm~RkP~----GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 827 GDSPLTAVQLLWVNLIMDTLGALALATEP--PTDELMKRKPV----GRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhccCC--CChHHhcCCCC----CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 56789999999999999999999999864 67778888887 9999999999999999999999999998876532
Q ss_pred cccccCCCCccc-hhhhHHHHHHHHHHHHHHHHHHHHhh-----cc-hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 003670 631 EHQAFNDDGKTV-GRDIFGATMYTCIVWVVNLQLALAIS-----YF-TLIQHIFIWGSIALWYLFMLAYGAITPTHSTNA 703 (804)
Q Consensus 631 ~~~~~~~~g~~~-~~~~~~t~~ft~~v~~~n~~~~l~~~-----~~-~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~ 703 (804)
..|..++... ......|++|.++||.+.+.-....+ -| ..++|..+.+.+..++++++++..+...
T Consensus 901 --~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~----- 973 (1034)
T KOG0204|consen 901 --SIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGA----- 973 (1034)
T ss_pred --hhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCc-----
Confidence 2333334332 23355688899988876555443221 11 2455666666777778888777665532
Q ss_pred HHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHH
Q 003670 704 YKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAIQ 739 (804)
Q Consensus 704 ~~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i~ 739 (804)
+|.+..+++..|++++++.++.++.-.+.|.+-
T Consensus 974 ---~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP 1006 (1034)
T KOG0204|consen 974 ---FFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIP 1006 (1034)
T ss_pred ---ceeeecccHHHHHHHHHHHHHHHHHHHHheecc
Confidence 566788999999999999999888888877653
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2e-73 Score=692.68 Aligned_cols=562 Identities=22% Similarity=0.310 Sum_probs=430.8
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+.+++++++|+++++|+||++++||||||||||+|+|++.+++..+..++...
T Consensus 356 ~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~--------------------------- 408 (941)
T TIGR01517 356 KMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD--------------------------- 408 (941)
T ss_pred HHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc---------------------------
Confidence 45788999999999999999999999999999999999999987654332110
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
+. .. .++...+++...++||+..+...++.+ ..+..+||+|.|+++++++.|....
T Consensus 409 -----------------~~-----~~-~~~~~~~~l~~~~~~~s~~~~~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~ 464 (941)
T TIGR01517 409 -----------------VL-----RN-VPKHVRNILVEGISLNSSSEEVVDRGG-KRAFIGSKTECALLGFLLLLGRDYQ 464 (941)
T ss_pred -----------------cc-----cc-CCHHHHHHHHHHHHhCCCCccccCCCC-ccccCCCccHHHHHHHHHHcCCCHH
Confidence 00 00 012344555555555555443221112 1345689999999999988774221
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhcc----Cc-----c
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN----GR-----D 234 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~ 234 (804)
. .+..|+++..+||+|+||||+++++.+++++++|+||||+.|+++|+.. +. +
T Consensus 465 ~------------------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~ 526 (941)
T TIGR01517 465 E------------------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD 526 (941)
T ss_pred H------------------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH
Confidence 1 1235778889999999999999999887889999999999999999752 11 1
Q ss_pred cHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCC
Q 003670 235 FEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNG 314 (804)
Q Consensus 235 ~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~ 314 (804)
.++.+.+.+++++++|+||+++|||.++.+++..| +..|+||+|+|+++++|++|++
T Consensus 527 ~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~ 583 (941)
T TIGR01517 527 DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPG 583 (941)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc-----------------------cccccCcEEEEEeeccCCCchh
Confidence 35678889999999999999999999876543211 2347899999999999999999
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcc
Q 003670 315 VPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGK 394 (804)
Q Consensus 315 v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (804)
++++|+.|+++||++||+|||+..||.++|++|||.+++.
T Consensus 584 ~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~---------------------------------------- 623 (941)
T TIGR01517 584 VREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG---------------------------------------- 623 (941)
T ss_pred HHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc----------------------------------------
Confidence 9999999999999999999999999999999999975432
Q ss_pred cccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChh
Q 003670 395 NQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVG 474 (804)
Q Consensus 395 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 474 (804)
.+++|+++....++++.+.. . +..||||++|+||..+|+.+|+ .|++|+|+|||.||+|
T Consensus 624 --------------~vi~G~~~~~l~~~el~~~i----~--~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDap 682 (941)
T TIGR01517 624 --------------LAMEGKEFRRLVYEEMDPIL----P--KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAP 682 (941)
T ss_pred --------------eEeeHHHhhhCCHHHHHHHh----c--cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHH
Confidence 26677777665544443322 2 3459999999999999999998 8999999999999999
Q ss_pred hhhhcCcceeecCcchhhhhcccchhcch--HhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 003670 475 MLQEADIGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQ 552 (804)
Q Consensus 475 ml~~AdvGI~i~g~~~~~a~~aaD~~i~~--f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~ 552 (804)
||++|||||||+......|+++||+++.+ |+.+.++ +.+||.+|.|+++.+.|.+++|+..+++.+++.++.+ .
T Consensus 683 ALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~---~ 758 (941)
T TIGR01517 683 ALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS---T 758 (941)
T ss_pred HHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---c
Confidence 99999999999523333399999999996 6668888 7999999999999999999999999988888877753 4
Q ss_pred ccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 003670 553 PAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEH 632 (804)
Q Consensus 553 ~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 632 (804)
.+++++|++|+|++++++|+++++.+. ++++.+.+.|+ .+...++++.++..+++.|++++++.|++++....
T Consensus 759 ~pl~~~qil~inl~~d~~~al~l~~e~--~~~~lm~~~P~----~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~- 831 (941)
T TIGR01517 759 SPLTAVQLLWVNLIMDTLAALALATEP--PTEALLDRKPI----GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS- 831 (941)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHccCC--ccHHHHhCCCC----CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 579999999999999999999999643 45555555554 45667889999999999999999988776554321
Q ss_pred cccCCCC----ccchhhhHHHHHHHHHHHHHHHHHHHHhh-c----c-hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 003670 633 QAFNDDG----KTVGRDIFGATMYTCIVWVVNLQLALAIS-Y----F-TLIQHIFIWGSIALWYLFMLAYGAITPTHSTN 702 (804)
Q Consensus 633 ~~~~~~g----~~~~~~~~~t~~ft~~v~~~n~~~~l~~~-~----~-~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~ 702 (804)
.+...+ .........|++|+++++...++.+.... + | .+++|..+|+++++.+++++++..+. +.
T Consensus 832 -~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~---~~- 906 (941)
T TIGR01517 832 -IFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFG---GS- 906 (941)
T ss_pred -hhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHH---HH-
Confidence 111111 00012345689999988887777654322 1 2 34677888888888877776655321 22
Q ss_pred hHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHH
Q 003670 703 AYKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAI 738 (804)
Q Consensus 703 ~~~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i 738 (804)
+|...++++..|+.+++++++.++...+.|++
T Consensus 907 ----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 907 ----FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred ----HhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67778889999999999988888888887765
No 12
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.6e-69 Score=654.68 Aligned_cols=561 Identities=19% Similarity=0.225 Sum_probs=434.0
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+.+++++++|+++++|+||++++||||||||||+|+|++.+++..+..+... +. ....
T Consensus 304 r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~-~~----------~~~~----------- 361 (884)
T TIGR01522 304 RMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTML-NA----------VSLN----------- 361 (884)
T ss_pred HHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeec-cC----------CccC-----------
Confidence 4578899999999999999999999999999999999999998765322100 00 0000
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
..+.+..+++ ......++.+.+++.++++||++..+.++ +. ..+||.|.|+++++++.|+...
T Consensus 362 ------~~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~~ 424 (884)
T TIGR01522 362 ------QFGEVIVDGD------VLHGFYTVAVSRILEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDDL 424 (884)
T ss_pred ------CCCccccccc------ccccccCHHHHHHHHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHhH
Confidence 0000000000 01111234567889999999998654322 11 1268999999999998875311
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcC-CCeEEEEEcCchhHhHHHhhcc----C------
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE-EGKILLLCKGADSVMFDRLAKN----G------ 232 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----~------ 232 (804)
+..|+.+..+||+|+||||+++++.+ ++++++|+|||||.|+.+|+.. +
T Consensus 425 --------------------~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~ 484 (884)
T TIGR01522 425 --------------------RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLT 484 (884)
T ss_pred --------------------HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCC
Confidence 13577889999999999999999874 5678999999999999999742 1
Q ss_pred cccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeecccc
Q 003670 233 RDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQ 312 (804)
Q Consensus 233 ~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr 312 (804)
++.++.+.+++++++++|+|++++|||.+ +.||+|+|+++++|++|
T Consensus 485 ~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------------------------------~~~l~~lGli~l~Dp~r 530 (884)
T TIGR01522 485 QQQRDVIQEEAAEMASAGLRVIAFASGPE----------------------------------KGQLTFLGLVGINDPPR 530 (884)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------------------------------CCCeEEEEEEeccCcch
Confidence 22346677888999999999999999864 24899999999999999
Q ss_pred CChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhh
Q 003670 313 NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINE 392 (804)
Q Consensus 313 ~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 392 (804)
++++++|+.|+++||+++|+|||+.+||.++|+++|+...+..
T Consensus 531 ~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~------------------------------------- 573 (884)
T TIGR01522 531 PGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ------------------------------------- 573 (884)
T ss_pred hHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------
Confidence 9999999999999999999999999999999999999754321
Q ss_pred cccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCC
Q 003670 393 GKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGAND 472 (804)
Q Consensus 393 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND 472 (804)
+++|..++..-++++.+.+ . +..||||++|+||..+|+.+|+ .|+.|+|+|||.||
T Consensus 574 -----------------~v~g~~l~~~~~~~l~~~~----~--~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND 629 (884)
T TIGR01522 574 -----------------SVSGEKLDAMDDQQLSQIV----P--KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVND 629 (884)
T ss_pred -----------------eeEhHHhHhCCHHHHHHHh----h--cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCccc
Confidence 3456555544333333322 2 3459999999999999999998 89999999999999
Q ss_pred hhhhhhcCcceeecCcchhhhhcccchhcch--HhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 003670 473 VGMLQEADIGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFS 550 (804)
Q Consensus 473 ~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~--f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s 550 (804)
++||++|||||+|+......|+.+||+++.+ |..+.++ +.+||.+|+|+++++.|.++.|+..+++.+++.++.
T Consensus 630 ~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~-i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~--- 705 (884)
T TIGR01522 630 APALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSA-IEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG--- 705 (884)
T ss_pred HHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---
Confidence 9999999999999423334477899999987 5557777 899999999999999999999999887777666553
Q ss_pred CcccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003670 551 GQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAM 630 (804)
Q Consensus 551 ~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 630 (804)
...+++++|++|+|++++.+|+++++.+ +++++.+.++|+ .++.+++++.++..+++.|++++++.++.+...+
T Consensus 706 ~~~pl~~~qiL~inl~~d~~~a~~l~~e--~~~~~~m~~~P~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 779 (884)
T TIGR01522 706 FPNPLNAMQILWINILMDGPPAQSLGVE--PVDKDVMRKPPR----PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREM 779 (884)
T ss_pred CCCchhHHHHHHHHHHHHhhHHHHhccC--CCChhHhhCCCC----CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457999999999999999999999984 366777777776 5678899999999999999998887766544322
Q ss_pred cccccCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhh-c---c--hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 003670 631 EHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAIS-Y---F--TLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAY 704 (804)
Q Consensus 631 ~~~~~~~~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~~-~---~--~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~ 704 (804)
.. |.. .....|++|+++++.+.++.+.... + | .+++|..+|+++++..+++++..++|+ ++.
T Consensus 780 ~~------~~~--~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~-~~~--- 847 (884)
T TIGR01522 780 QD------GVI--TARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP-LQS--- 847 (884)
T ss_pred cC------Ccc--hhhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHH-HHH---
Confidence 21 111 1234688888888877666654332 2 2 235788899999999999888888884 333
Q ss_pred HHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003670 705 KVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAIQMRF 742 (804)
Q Consensus 705 ~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i~r~~ 742 (804)
+|...++++..|+.+++++++.++..++.|+++|.+
T Consensus 848 --~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 848 --VFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred --HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 777888999999999999999999999999988764
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.1e-68 Score=657.12 Aligned_cols=575 Identities=18% Similarity=0.221 Sum_probs=401.2
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+.++++++||+++.+|.||++++||||||||||+|+|+|.+++..+...... . .
T Consensus 428 rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~-~------------~------------- 481 (1054)
T TIGR01657 428 RLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL-K------------I------------- 481 (1054)
T ss_pred HHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc-c------------c-------------
Confidence 3468899999999999999999999999999999999999987543210000 0 0
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
. .+........+..++++||++....+ . ..+||.|.|+++++ |+.+.
T Consensus 482 -----------------~------~~~~~~~~~~~~~~~a~C~~~~~~~~----~---~~Gdp~E~al~~~~---~~~~~ 528 (1054)
T TIGR01657 482 -----------------V------TEDSSLKPSITHKALATCHSLTKLEG----K---LVGDPLDKKMFEAT---GWTLE 528 (1054)
T ss_pred -----------------c------ccccccCchHHHHHHHhCCeeEEECC----E---EecCHHHHHHHHhC---CCEEE
Confidence 0 00000122356788999999975422 1 24799999999875 55543
Q ss_pred eecCCeE------EEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCC-CeEEEEEcCchhHhHHHhhccCcccH
Q 003670 164 QRTQTSI------SLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE-GKILLLCKGADSVMFDRLAKNGRDFE 236 (804)
Q Consensus 164 ~~~~~~i------~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~ 236 (804)
....... .+...+ ....|++++.+||+|+|||||||++.++ +++++|+|||||.|+++|++. ..+
T Consensus 529 ~~~~~~~~~~~~~~i~~~~------~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p 600 (1054)
T TIGR01657 529 EDDESAEPTSILAVVRTDD------PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVP 600 (1054)
T ss_pred CCCCcccccccccceeccC------CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCC
Confidence 3111000 011000 1257999999999999999999999764 578899999999999999864 457
Q ss_pred HHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChH
Q 003670 237 VETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVP 316 (804)
Q Consensus 237 ~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~ 316 (804)
+++.+.+++|+++|+|||++|||++++.++.++.+ .+ ++.+|+||+|+|+++++|++|++++
T Consensus 601 ~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~----------~~--------r~~~E~~L~flGli~~~d~lr~~~~ 662 (1054)
T TIGR01657 601 SDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD----------LS--------RDAVESNLTFLGFIVFENPLKPDTK 662 (1054)
T ss_pred hhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh----------cc--------HHHHhcCceEEEEEEEecCCCccHH
Confidence 88899999999999999999999997533222110 12 3568999999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhh---hHhhhhchhHHHHHHhhhhHHHHhhhc
Q 003670 317 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEI---LALEKTGAKSEITKASKESVLHQINEG 393 (804)
Q Consensus 317 ~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~ 393 (804)
++|+.|++|||++||+|||+..||.+||++|||+.++..++..+....+. ..+......+... .. ..........
T Consensus 663 ~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ 740 (1054)
T TIGR01657 663 EVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPF-AS-TQVEIPYPLG 740 (1054)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccc-cc-ccccccCccc
Confidence 99999999999999999999999999999999998776555544321100 0000000000000 00 0000000000
Q ss_pred ccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCCh
Q 003670 394 KNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDV 473 (804)
Q Consensus 394 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~ 473 (804)
.. .........+.++++|+.+..+.+. ..+.+.++...++ ||||++|+||..+|+.+|+ .|++|+|+|||+||+
T Consensus 741 ~~--~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~ 814 (1054)
T TIGR01657 741 QD--SVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHTT--VFARMAPDQKETLVELLQK-LDYTVGMCGDGANDC 814 (1054)
T ss_pred cc--chhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHH
Confidence 00 0000122356799999999876432 2234555555554 9999999999999999998 899999999999999
Q ss_pred hhhhhcCcceeecCcchhhhhcccchhcch--HhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 003670 474 GMLQEADIGIGISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSG 551 (804)
Q Consensus 474 ~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~--f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~ 551 (804)
+|||+|||||||++.+ |..||||++.+ |+.+.++ +.+||.++.++.+++.|.+..++...+..+...+ .+
T Consensus 815 ~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~ 886 (1054)
T TIGR01657 815 GALKQADVGISLSEAE---ASVAAPFTSKLASISCVPNV-IREGRCALVTSFQMFKYMALYSLIQFYSVSILYL----IG 886 (1054)
T ss_pred HHHHhcCcceeecccc---ceeecccccCCCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cc
Confidence 9999999999997665 56899999987 5557777 7899999999999999988888776544433222 13
Q ss_pred cccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003670 552 QPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAME 631 (804)
Q Consensus 552 ~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 631 (804)
.++.++|++|+|++++.+|+++++... +.++++.+.| ...++++..+..++++++++.++.++.++....
T Consensus 887 -~~l~~~Q~l~i~li~~~~~~l~l~~~~--p~~~l~~~~P-------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~ 956 (1054)
T TIGR01657 887 -SNLGDGQFLTIDLLLIFPVALLMSRNK--PLKKLSKERP-------PSNLFSVYILTSVLIQFVLHILSQVYLVFELHA 956 (1054)
T ss_pred -CcCccHHHHHHHHHHHHHHHHHHHcCC--chhhcCCCCC-------CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 457899999999999999999999853 3444444444 368999999999999999999988877766554
Q ss_pred ccccCCCCc-----cchhhhHHHHHHHHHHHHHHHHHHHHhhc-----chhHHHHHHHHHHHHHHHHHH
Q 003670 632 HQAFNDDGK-----TVGRDIFGATMYTCIVWVVNLQLALAISY-----FTLIQHIFIWGSIALWYLFML 690 (804)
Q Consensus 632 ~~~~~~~g~-----~~~~~~~~t~~ft~~v~~~n~~~~l~~~~-----~~~~~~~~i~~si~~~~i~~~ 690 (804)
.+++..... ........|++|... ...++..++..+. .+++.|..++.++++.+++++
T Consensus 957 ~~~~~~~~~~~~~~~~~~~~~~T~~f~~~-~~~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~ 1024 (1054)
T TIGR01657 957 QPWYKPENPVDLEKENFPNLLNTVLFFVS-SFQYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLLL 1024 (1054)
T ss_pred CCCccCCCCCCcccccCccHHHHHHHHHH-HHHHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHHHH
Confidence 434311110 011123356666333 3333433332221 246788878777777655554
No 14
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.1e-67 Score=632.67 Aligned_cols=538 Identities=19% Similarity=0.188 Sum_probs=399.6
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+++++++++|+++.+|+||++++||||||||||+|+|++.+++.... +
T Consensus 349 ~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~-~------------------------------- 396 (903)
T PRK15122 349 AMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG-R------------------------------- 396 (903)
T ss_pred HHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC-C-------------------------------
Confidence 35788999999999999999999999999999999999998642110 0
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
.. .++++..++|... + . + .+||.|.|+++++.+.|....
T Consensus 397 ---------------------------~~---~~~l~~a~l~s~~--~--~--~-----~~~p~e~All~~a~~~~~~~~ 435 (903)
T PRK15122 397 ---------------------------KD---ERVLQLAWLNSFH--Q--S--G-----MKNLMDQAVVAFAEGNPEIVK 435 (903)
T ss_pred ---------------------------Ch---HHHHHHHHHhCCC--C--C--C-----CCChHHHHHHHHHHHcCchhh
Confidence 00 1233444433111 0 0 1 369999999999987664210
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhcc---------Ccc
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN---------GRD 234 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~ 234 (804)
...|+.+..+||+|.||||++++++.+|++++++|||++.|+++|+.. .++
T Consensus 436 --------------------~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 495 (903)
T PRK15122 436 --------------------PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEA 495 (903)
T ss_pred --------------------hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHH
Confidence 135667888999999999999999878888999999999999999742 112
Q ss_pred cHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCC
Q 003670 235 FEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNG 314 (804)
Q Consensus 235 ~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~ 314 (804)
.++.+.+.+++++.+|+|++++|||.++.++..++ ..+..|+|++|+|+++++||+|++
T Consensus 496 ~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~ 554 (903)
T PRK15122 496 RRERLLALAEAYNADGFRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKES 554 (903)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHH
Confidence 34567778899999999999999998865432100 012357899999999999999999
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcc
Q 003670 315 VPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGK 394 (804)
Q Consensus 315 v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (804)
++++|+.|+++||+++|+|||+..||.+||+++||..+.
T Consensus 555 a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~----------------------------------------- 593 (903)
T PRK15122 555 AAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGE----------------------------------------- 593 (903)
T ss_pred HHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----------------------------------------
Confidence 999999999999999999999999999999999994211
Q ss_pred cccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChh
Q 003670 395 NQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVG 474 (804)
Q Consensus 395 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 474 (804)
+++|.+++.+-++++.+ ....+. ||+|++|+||..+|+.+|+ .|++|+|+|||.||+|
T Consensus 594 ---------------vi~G~el~~~~~~el~~----~v~~~~--VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaP 651 (903)
T PRK15122 594 ---------------PLLGTEIEAMDDAALAR----EVEERT--VFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAP 651 (903)
T ss_pred ---------------ccchHhhhhCCHHHHHH----HhhhCC--EEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHH
Confidence 45666666544433333 233333 9999999999999999998 8999999999999999
Q ss_pred hhhhcCcceeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 003670 475 MLQEADIGIGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQ 552 (804)
Q Consensus 475 ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~ 552 (804)
||++|||||||+ +....|+++||+++.+.++ +... +.+||.+|.|+++++.|.+..|+..++..++..++. +.
T Consensus 652 ALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~ 726 (903)
T PRK15122 652 ALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PF 726 (903)
T ss_pred HHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---cc
Confidence 999999999995 3444589999999998555 7777 899999999999999999999998877766655553 22
Q ss_pred ccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 003670 553 PAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEH 632 (804)
Q Consensus 553 ~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 632 (804)
.++.+.|++|.|++++. |.++++.++ ++++.+ +.|+ .++.+++++..++ ..+.+.+.+++.|++.++.+..
T Consensus 727 ~pl~~~qil~~nli~D~-~~lal~~d~--~~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 797 (903)
T PRK15122 727 LPMLAIHLLLQNLMYDI-SQLSLPWDK--MDKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA 797 (903)
T ss_pred chhHHHHHHHHHHHHHH-HHHhhcCCC--CCHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc
Confidence 46889999999999995 999998753 556666 8886 4556677764443 2223333444444443332221
Q ss_pred cccCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHH
Q 003670 633 QAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAIS-YFTLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEAL 711 (804)
Q Consensus 633 ~~~~~~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~~-~~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~ 711 (804)
|.......+.+.+|+++++.+.+.++.... ...++.+...+..+++.++++++..++|+. ....+|...
T Consensus 798 ------~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~~~f~~~ 867 (903)
T PRK15122 798 ------NSVEMQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFS----PLGAMVGLE 867 (903)
T ss_pred ------CcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHH----HHHHHhCCC
Confidence 110000135677899999988777764333 224455666777777777777777777731 112267788
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHH-HHHHhh
Q 003670 712 APAPLFWLVTLFVVISTLIPYFAYS-AIQMRF 742 (804)
Q Consensus 712 ~~~~~~wl~~l~v~~~~ll~~~i~k-~i~r~~ 742 (804)
++++.+|++++.++++.++...+.| ++.|+|
T Consensus 868 ~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 868 PLPWSYFPWLAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 8899999999988888888777776 444443
No 15
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=6.7e-65 Score=609.99 Aligned_cols=519 Identities=19% Similarity=0.262 Sum_probs=377.9
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+.+++++++|+++.+|+||++++||||||||||+|+|++.++... .+.
T Consensus 351 ~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~---~~~----------------------------- 398 (902)
T PRK10517 351 KLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI---SGK----------------------------- 398 (902)
T ss_pred HHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC---CCC-----------------------------
Confidence 356899999999999999999999999999999999999875210 000
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
+ .+++++..++|.... . + .+||.|.|++.++...+..
T Consensus 399 ---------------------------~---~~~ll~~a~l~~~~~----~--~-----~~~p~d~All~~a~~~~~~-- 435 (902)
T PRK10517 399 ---------------------------T---SERVLHSAWLNSHYQ----T--G-----LKNLLDTAVLEGVDEESAR-- 435 (902)
T ss_pred ---------------------------C---HHHHHHHHHhcCCcC----C--C-----CCCHHHHHHHHHHHhcchh--
Confidence 0 023455555543321 0 1 3699999999988653200
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhcc---------Ccc
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN---------GRD 234 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~ 234 (804)
.....|+.+..+||||+||||+++++++++...+++|||++.|+++|+.. +++
T Consensus 436 ------------------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 497 (902)
T PRK10517 436 ------------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDI 497 (902)
T ss_pred ------------------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHH
Confidence 01245777889999999999999999877888999999999999999752 123
Q ss_pred cHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCC
Q 003670 235 FEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNG 314 (804)
Q Consensus 235 ~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~ 314 (804)
.++.+.+.+++++++|+|++++|||+++.++.. + + ...|+|++|+|+++++||+|++
T Consensus 498 ~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~-~-------------~---------~~~e~~l~~lGli~~~Dp~R~~ 554 (902)
T PRK10517 498 MLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD-Y-------------Q---------RADESDLILEGYIAFLDPPKET 554 (902)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEecCCccccc-c-------------c---------cccccCceeeehHhhhCcchhh
Confidence 355677788899999999999999988653210 0 0 1136899999999999999999
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcc
Q 003670 315 VPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGK 394 (804)
Q Consensus 315 v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (804)
++++|++|+++||+|+|+|||+..||.+||+++||..+.
T Consensus 555 a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~----------------------------------------- 593 (902)
T PRK10517 555 TAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGE----------------------------------------- 593 (902)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC-----------------------------------------
Confidence 999999999999999999999999999999999994211
Q ss_pred cccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChh
Q 003670 395 NQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVG 474 (804)
Q Consensus 395 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 474 (804)
+++|..++.+-++++.+ ....+ .||+|++|+||..+|+.+|+ .|++|+|+|||.||+|
T Consensus 594 ---------------v~~G~el~~l~~~el~~----~~~~~--~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaP 651 (902)
T PRK10517 594 ---------------VLIGSDIETLSDDELAN----LAERT--TLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAP 651 (902)
T ss_pred ---------------ceeHHHHHhCCHHHHHH----HHhhC--cEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHH
Confidence 45666665443333332 22233 39999999999999999998 8999999999999999
Q ss_pred hhhhcCcceeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 003670 475 MLQEADIGIGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQ 552 (804)
Q Consensus 475 ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~ 552 (804)
||++|||||+|+ +....|+++||+++.+.++ +... +.+||.+|.|+++++.|.+..|+..++..++..++..+
T Consensus 652 ALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~a-i~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~--- 726 (902)
T PRK10517 652 ALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEG-VIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPF--- 726 (902)
T ss_pred HHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh---
Confidence 999999999995 4445599999999998655 7776 89999999999999999999999988888776665322
Q ss_pred ccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 003670 553 PAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEH 632 (804)
Q Consensus 553 ~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 632 (804)
.++.+.|++|.|++++ +|.++++.++ ++++.+ +.|+-+. . .. .....+..|++.+++.+..++..+.
T Consensus 727 ~pl~~~qiL~inl~~D-~~~~al~~d~--~~~~~m-~~p~r~~---~-~~----~~~~~~~~g~~~~~~~~~~~~~~~~- 793 (902)
T PRK10517 727 LPMLPLHLLIQNLLYD-VSQVAIPFDN--VDDEQI-QKPQRWN---P-AD----LGRFMVFFGPISSIFDILTFCLMWW- 793 (902)
T ss_pred hhhHHHHHHHHHHHHH-HhHHhhcCCC--CChhhh-cCCCCCC---H-HH----HHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 3689999999999999 7999998854 455555 4454111 1 11 1122234455544433332222111
Q ss_pred cccCCCCccchhhhHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHHHhhcC--CCCCcchHHHHHH
Q 003670 633 QAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAI-SYFTLIQHIFIWGSIALWYLFMLAYGAIT--PTHSTNAYKVFIE 709 (804)
Q Consensus 633 ~~~~~~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~-~~~~~~~~~~i~~si~~~~i~~~i~~~~~--~~~~~~~~~~~~~ 709 (804)
.+..... .....+.+.+|+.+++...+.++... ...+++.+...|..+++.++++++..++| +. +. +|+
T Consensus 794 -~~~~~~~-~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~-----~~~ 865 (902)
T PRK10517 794 -VFHANTP-ETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPL-AS-----YLQ 865 (902)
T ss_pred -Hccccch-hhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHH-HH-----hhC
Confidence 0110000 00113556678888888877776433 33355677888888888888888877777 31 22 555
Q ss_pred HHccC--hHHHHHHHHHHHH
Q 003670 710 ALAPA--PLFWLVTLFVVIS 727 (804)
Q Consensus 710 ~~~~~--~~~wl~~l~v~~~ 727 (804)
..+++ ...|+.++.++++
T Consensus 866 ~~~l~~~~~~~~~~~~~~~~ 885 (902)
T PRK10517 866 LQALPLSYFPWLVAILAGYM 885 (902)
T ss_pred CcCCChhHHHHHHHHHHHHH
Confidence 55556 5666666655555
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.2e-64 Score=606.26 Aligned_cols=524 Identities=20% Similarity=0.229 Sum_probs=379.7
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+.+++++++|+++.+|+||++++||||||||||+|+|++.++.... +.
T Consensus 316 ~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~-----~~--------------------------- 363 (867)
T TIGR01524 316 NMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS-----GE--------------------------- 363 (867)
T ss_pred HHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC-----CC---------------------------
Confidence 4578999999999999999999999999999999999998863110 00
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
. .++++...++|.... . ..+||.|.|+++++.+.+...
T Consensus 364 ---------------------------~---~~~~l~~a~l~~~~~----~-------~~~~p~~~Al~~~~~~~~~~~- 401 (867)
T TIGR01524 364 ---------------------------T---SERVLKMAWLNSYFQ----T-------GWKNVLDHAVLAKLDESAARQ- 401 (867)
T ss_pred ---------------------------C---HHHHHHHHHHhCCCC----C-------CCCChHHHHHHHHHHhhchhh-
Confidence 0 123444444443321 0 135999999999987532100
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhcc---------Ccc
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKN---------GRD 234 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~ 234 (804)
....|+.+..+||||+||||+++++++++...+++|||++.|+++|+.. +++
T Consensus 402 -------------------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 462 (867)
T TIGR01524 402 -------------------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSES 462 (867)
T ss_pred -------------------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHH
Confidence 1245677888999999999999999877678899999999999999753 122
Q ss_pred cHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCC
Q 003670 235 FEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNG 314 (804)
Q Consensus 235 ~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~ 314 (804)
.++.+.+.+++++.+|+|++++|||+++.++.+ + .+..|+|++|+|+++++||+|++
T Consensus 463 ~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~ 519 (867)
T TIGR01524 463 EKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F----------------------TKTDEEQLIIEGFLGFLDPPKES 519 (867)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c----------------------cccccCCcEEEEEEEeeCCCchh
Confidence 356778888999999999999999998654210 0 01236799999999999999999
Q ss_pred hHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcc
Q 003670 315 VPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGK 394 (804)
Q Consensus 315 v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (804)
++++|++|+++||+++|+|||+..||.+||+++||..++
T Consensus 520 ~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~----------------------------------------- 558 (867)
T TIGR01524 520 TKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND----------------------------------------- 558 (867)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----------------------------------------
Confidence 999999999999999999999999999999999995321
Q ss_pred cccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChh
Q 003670 395 NQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVG 474 (804)
Q Consensus 395 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 474 (804)
+++|.+++..-++++. +.... ..||+|++|+||.++|+.+|+ .|++|+|+|||.||+|
T Consensus 559 ---------------v~~g~~l~~~~~~el~----~~~~~--~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDap 616 (867)
T TIGR01524 559 ---------------FLLGADIEELSDEELA----RELRK--YHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAP 616 (867)
T ss_pred ---------------eeecHhhhhCCHHHHH----HHhhh--CeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHH
Confidence 3455555443332322 22222 339999999999999999998 8999999999999999
Q ss_pred hhhhcCcceeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 003670 475 MLQEADIGIGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQ 552 (804)
Q Consensus 475 ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~ 552 (804)
||++|||||+|+ .....|+++||+++.+.++ +... +.+||.+|+|+++.+.|.+..|+..++..++..++. ..
T Consensus 617 ALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~a-i~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~---~~ 691 (867)
T TIGR01524 617 ALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEG-VIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI---PF 691 (867)
T ss_pred HHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---hh
Confidence 999999999996 3445589999999998555 7776 899999999999999999999998888777665553 22
Q ss_pred ccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHH---HHHHHHh
Q 003670 553 PAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIII---FFFCKKA 629 (804)
Q Consensus 553 ~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~---f~~~~~~ 629 (804)
.++.+.|++|.|++++ +|.++++..+ ++++.+ +.|+-+ +.. .....++..|++.+++. |++.++.
T Consensus 692 ~pl~~~qil~inl~~d-~~~~al~~~~--~~~~~m-~~p~~~----~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~ 759 (867)
T TIGR01524 692 LPMLSLHLLIQNLLYD-FSQLTLPWDK--MDREFL-KKPHQW----EQK----GMGRFMLCIGPVSSIFDIATFLLMWFV 759 (867)
T ss_pred hhHHHHHHHHHHHHHH-HHHHhhcCCC--CChHhh-CCCCCC----Chh----hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999 7999999853 455554 556522 111 12222334555444433 3332222
Q ss_pred hcccccCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHHhhcCCC-CCcchHHHH
Q 003670 630 MEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISY-FTLIQHIFIWGSIALWYLFMLAYGAITPT-HSTNAYKVF 707 (804)
Q Consensus 630 ~~~~~~~~~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~~~-~~~~~~~~i~~si~~~~i~~~i~~~~~~~-~~~~~~~~~ 707 (804)
+.. .+. .....+.+.+|+.+++...+.++..... ..++.|...+..+++.++++++..++|+. ++. +
T Consensus 760 ~~~-----~~~-~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~ 828 (867)
T TIGR01524 760 FSA-----NTV-EEQALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGH-----S 828 (867)
T ss_pred hcc-----cch-hhhhHHHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhh-----h
Confidence 210 111 0112356788999999887777644332 24567888888888888888888888842 222 5
Q ss_pred HHHHcc--ChHHHHHHHHHHHHHHHHHHHHH
Q 003670 708 IEALAP--APLFWLVTLFVVISTLIPYFAYS 736 (804)
Q Consensus 708 ~~~~~~--~~~~wl~~l~v~~~~ll~~~i~k 736 (804)
|...++ .+..|+.++.++++ +...+.|
T Consensus 829 f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k 857 (867)
T TIGR01524 829 IGLVSLPLSYFPWLIAILVGYM--ATMQLVK 857 (867)
T ss_pred hccccCCccHHHHHHHHHHHHH--HHHHHHH
Confidence 555544 44456666555544 3344444
No 17
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-64 Score=557.31 Aligned_cols=613 Identities=20% Similarity=0.237 Sum_probs=461.8
Q ss_pred cCCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcc
Q 003670 3 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 82 (804)
Q Consensus 3 ~~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (804)
+++.++++++|++.++|.||...+||||||||||+|+|+|..+|.+.........+. +.+
T Consensus 345 krMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~------~~~-------------- 404 (1019)
T KOG0203|consen 345 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTED------QSG-------------- 404 (1019)
T ss_pred HHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhh------hhc--------------
Confidence 467889999999999999999999999999999999999999998865432211110 000
Q ss_pred ccccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCC--CCceEEecCCccHHHHHHHHHHcCc
Q 003670 83 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDEN--TGKVMYEAESPDEAAFVIAARELGF 160 (804)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~--~~~~~y~~~sp~e~Alv~~a~~~g~ 160 (804)
......+.....+.++.++||.+..+..+. +-.-.-..+++.|.||++++.-.-.
T Consensus 405 -----------------------~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~ 461 (1019)
T KOG0203|consen 405 -----------------------QSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILG 461 (1019)
T ss_pred -----------------------ccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcc
Confidence 001122456778999999999998764332 1222334689999999999875422
Q ss_pred EEEeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCC---CeEEEEEcCchhHhHHHhhcc------
Q 003670 161 EFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE---GKILLLCKGADSVMFDRLAKN------ 231 (804)
Q Consensus 161 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~------ 231 (804)
.. ...+..++.+...||||++|..-.+.+..| .++.+.+|||||.++++|+..
T Consensus 462 ~~------------------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e 523 (1019)
T KOG0203|consen 462 SV------------------MELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEE 523 (1019)
T ss_pred hH------------------HHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCC
Confidence 11 123467788899999999999999988765 578999999999999999864
Q ss_pred ---CcccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeee
Q 003670 232 ---GRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVE 308 (804)
Q Consensus 232 ---~~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~ 308 (804)
++...+.+.....++...|-||+.+|++.++++++....+-..+. .+.--.++.|+|++++-
T Consensus 524 ~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~---------------~n~p~~nl~FlGl~s~i 588 (1019)
T KOG0203|consen 524 KPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDD---------------VNFPTDNLRFLGLISMI 588 (1019)
T ss_pred CCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCC---------------CCCcchhccccchhhcc
Confidence 334567788888899999999999999999988665432111100 11223589999999999
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHH
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 388 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 388 (804)
||+|..+|+++.+++.||||+.|+|||++.||.++|++.||+..+..... .+..
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e--------------------------~~a~ 642 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVE--------------------------DIAK 642 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhh--------------------------hhHH
Confidence 99999999999999999999999999999999999999998875532110 0000
Q ss_pred HhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecC
Q 003670 389 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGD 468 (804)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 468 (804)
+...... ..++....+.++.|.+|..+.++ ++.++.....-.||+|.||+||..||+..|+ .|.+|..+||
T Consensus 643 r~~~~v~----~vn~~~a~a~VihG~eL~~~~~~----qld~il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGD 713 (1019)
T KOG0203|consen 643 RLNIPVE----QVNSRDAKAAVIHGSELPDMSSE----QLDELLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGD 713 (1019)
T ss_pred hcCCccc----ccCccccceEEEecccccccCHH----HHHHHHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCC
Confidence 1100001 11233467899999999876554 4444555566689999999999999999998 8999999999
Q ss_pred CcCChhhhhhcCcceee--cCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 003670 469 GANDVGMLQEADIGIGI--SGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYE 544 (804)
Q Consensus 469 G~ND~~ml~~AdvGI~i--~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~ 544 (804)
|.||.||||.||||||| +|++. ++.|||.++.|++| ++-- +.+||.+|+|++|.|.|.+..|+..+.+.++|.
T Consensus 714 GVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi 790 (1019)
T KOG0203|consen 714 GVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI 790 (1019)
T ss_pred CcCCChhhcccccceeeccccchH--HHhhcceEEecCcchhheee-cccceehhhhHHHHHHHHHHhcchhHhHHHHHH
Confidence 99999999999999988 44444 89999999999888 4444 789999999999999999999999999999888
Q ss_pred HhhcCCCccc-chHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHH-HHHHHHHHHHHHHH
Q 003670 545 AYTTFSGQPA-YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRI-FGWMFNGLYSAIII 622 (804)
Q Consensus 545 ~~~~~s~~~~-~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 622 (804)
++ |.|+ +..+.++.+.+..+..|++.++++. +.++.|++.|+ ....+++.|.+.+ ..++..|++|+++.
T Consensus 791 ~~----giPLplgtitIL~IDLgTDmvPAiSLAYE~--aEsDIM~r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~ag 861 (1019)
T KOG0203|consen 791 LF----GIPLPLGTVTILCIDLGTDIVPAISLAYEK--AESDIMLRPPR---NPKDDKLVNKRLISYSYLQIGMIQALAG 861 (1019)
T ss_pred Hh----CCCcccchhhhhhhHhhcccchhhhHhccC--chhhHHhcCCC---CCcccccccchhHHHHHHHHHHHHHHHH
Confidence 87 5565 7889999999999999999999864 56777888887 2345678887774 66789999999999
Q ss_pred HHHHHHhhccccc---------------------CCCCccchhh-------hHHHHHHHHHHHHHHHHHHHH-hhcch--
Q 003670 623 FFFCKKAMEHQAF---------------------NDDGKTVGRD-------IFGATMYTCIVWVVNLQLALA-ISYFT-- 671 (804)
Q Consensus 623 f~~~~~~~~~~~~---------------------~~~g~~~~~~-------~~~t~~ft~~v~~~n~~~~l~-~~~~~-- 671 (804)
|+.++..+...+| .+.|+..... +-++..|.+++.++-..+.+. +++-+
T Consensus 862 F~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlf 941 (1019)
T KOG0203|consen 862 FFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIF 941 (1019)
T ss_pred HHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHH
Confidence 9888877665444 1224443322 223333444444332222221 11112
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 003670 672 --LIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAIQMRFFPM 745 (804)
Q Consensus 672 --~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i~r~~~P~ 745 (804)
=+.|+.++.++++-.++..+++|.|. ... .++..++.+.+|++-+...+.-++.+++.|++.|.| |.
T Consensus 942 qqGmrN~vl~f~v~~e~~La~fl~y~pg-~~~-----~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~-P~ 1010 (1019)
T KOG0203|consen 942 QQGMRNKVLIFAVIFETCLACFLCYCPG-VLY-----ALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY-PG 1010 (1019)
T ss_pred HhhhhhhhHHHHHHHHHHHHHHHhcCcc-HHH-----HhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC-CC
Confidence 25677888888888888888888884 222 677778889999988888888899999999988865 44
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-62 Score=549.06 Aligned_cols=542 Identities=19% Similarity=0.280 Sum_probs=375.9
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+-++++|.|-+++-+...|+++++|||||||||++.+++..+.+-...-.++ ++.....+. +
T Consensus 448 RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~-~~~~~~~~~--~--------------- 509 (1140)
T KOG0208|consen 448 RLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDG-PELKVVTED--S--------------- 509 (1140)
T ss_pred HHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccccccc-chhhhhhhh--h---------------
Confidence 4568999999999999999999999999999999999999876532110000 000000000 0
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
...+..-. -+........|..++|.||++....+. ..++|.|.-+. +..|+.+.
T Consensus 510 ---------~~~~~~l~-------~~~~~~~~~~~~~a~atCHSL~~v~g~-------l~GDPLdlkmf---e~t~w~~e 563 (1140)
T KOG0208|consen 510 ---------LQLFYKLS-------LRSSSLPMGNLVAAMATCHSLTLVDGT-------LVGDPLDLKMF---ESTGWVYE 563 (1140)
T ss_pred ---------ccceeecc-------ccccCCchHHHHHHHhhhceeEEeCCe-------eccCceeeeee---eccceEEE
Confidence 00000000 001111234788999999988765432 13567764443 34566664
Q ss_pred eec-----------CCeEEEEecC---CCCcccceEEEEEeEeecCCCCCceEEEEEEcC-CCeEEEEEcCchhHhHHHh
Q 003670 164 QRT-----------QTSISLHELD---PMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDE-EGKILLLCKGADSVMFDRL 228 (804)
Q Consensus 164 ~~~-----------~~~i~~~~~~---~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~ 228 (804)
+.+ .....++... +.........+.+++.+||+|..+||||||+.+ +.+..+|+|||||.|.+.|
T Consensus 564 e~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic 643 (1140)
T KOG0208|consen 564 EADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEIC 643 (1140)
T ss_pred eccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhc
Confidence 421 1111222211 121222233799999999999999999999986 5678999999999999999
Q ss_pred hccCcccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeee
Q 003670 229 AKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVE 308 (804)
Q Consensus 229 ~~~~~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~ 308 (804)
+++ .+++++++.+++|+.+|+|++++|+|.++.. .|.+. ....++.+|.||+|+|++.+|
T Consensus 644 ~p~--tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~---------------~~~~Rd~vEs~l~FlGLiVme 703 (1140)
T KOG0208|consen 644 KPE--TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQKA---------------QKLSRDTVESNLEFLGLIVME 703 (1140)
T ss_pred Ccc--cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHH---------------hhccHhhhhccceeeEEEEee
Confidence 976 6788999999999999999999999999875 33222 223457899999999999999
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHH-
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL- 387 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~- 387 (804)
++||+.++.+|+.|++|.||++|+|||+..||+.+|++||++.+....+....+.++.... ..+.+...++..
T Consensus 704 NkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~------~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 704 NKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSI------AQIVWLCVESQTQ 777 (1140)
T ss_pred cccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCC------ceeEEEEccCccc
Confidence 9999999999999999999999999999999999999999999988888776553221100 000000000000
Q ss_pred ----HHhhhcccccc--cCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCC
Q 003670 388 ----HQINEGKNQLS--ASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGK 461 (804)
Q Consensus 388 ----~~~~~~~~~~~--~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~ 461 (804)
++......... .+.-....+.+.++|+.+..++ ....+.+.+++.++. ||+||+|.||+++|+.+|+ .++
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y 853 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGY 853 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCc
Confidence 00000000000 0111245689999999999888 455667777777777 9999999999999999999 899
Q ss_pred eEEEecCCcCChhhhhhcCcceeecCcchhhhhcccchhcchHhh-HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHH
Q 003670 462 TTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRY-LERLLLVHGHWCYRRISSMICYFFYKNITFGLSV 540 (804)
Q Consensus 462 ~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~~-l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 540 (804)
.|+|||||+|||+||++|||||++|.+| |.-||.|+..-++. .+.-++.+||..+..--....|... +.+++
T Consensus 854 ~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMal----Ys~iq 926 (1140)
T KOG0208|consen 854 KVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMAL----YSAIQ 926 (1140)
T ss_pred EEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHH----HHHHH
Confidence 9999999999999999999999998877 77799999885433 3444499999987655555555432 23334
Q ss_pred HHHHHhhcCCCcccchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHH
Q 003670 541 FLYEAYTTFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAI 620 (804)
Q Consensus 541 ~~~~~~~~~s~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (804)
|....+.. .-...+++.|.++.+++....-+++++.++ +..++....| ...+++.+.+...+++.++..+
T Consensus 927 Fisv~~LY-~~~~nl~D~Qfl~iDLlii~pia~~m~~~~--a~~~L~~~rP-------~~~L~s~~~~~~l~~q~vli~l 996 (1140)
T KOG0208|consen 927 FISVVFLY-LINSNLGDLQFLFIDLLIITPIAVMMSRFD--ASDKLFPKRP-------PTNLLSKKILVPLLLQIVLICL 996 (1140)
T ss_pred HHhhheee-eecccccchhhhhhHHHHHHHHHHHHccCc--HHHHhcCCCC-------CccccccchhhhhHHHHHHHHH
Confidence 44333322 233458899999999998766666666653 4444444444 4678888888888777777777
Q ss_pred HHHHHHHHhhcccccC
Q 003670 621 IIFFFCKKAMEHQAFN 636 (804)
Q Consensus 621 ~~f~~~~~~~~~~~~~ 636 (804)
+-+.++...-..+++.
T Consensus 997 ~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 997 VQWILTLIVEPQPWYE 1012 (1140)
T ss_pred HHHhhheeecccccee
Confidence 7776666555545553
No 19
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.9e-59 Score=554.08 Aligned_cols=460 Identities=20% Similarity=0.257 Sum_probs=346.1
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+.+++++++|+++.+|+||.+++||||||||||+|+|++.+++..+..++
T Consensus 266 r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~------------------------------ 315 (755)
T TIGR01647 266 ELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD------------------------------ 315 (755)
T ss_pred HHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC------------------------------
Confidence 45789999999999999999999999999999999999999865421000
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
..++++..++|+. . ..+||.|.|+++++++.+.
T Consensus 316 -------------------------------~~~~l~~a~~~~~-----~--------~~~~pi~~Ai~~~~~~~~~--- 348 (755)
T TIGR01647 316 -------------------------------KDDVLLYAALASR-----E--------EDQDAIDTAVLGSAKDLKE--- 348 (755)
T ss_pred -------------------------------HHHHHHHHHHhCC-----C--------CCCChHHHHHHHHHHHhHH---
Confidence 1134555666642 0 1369999999998876430
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCC-CeEEEEEcCchhHhHHHhhccCcccHHHHHHH
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE-GKILLLCKGADSVMFDRLAKNGRDFEVETRDH 242 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 242 (804)
....|+++..+||++.+|+|++++++++ |+.++++|||++.|+++|+.. .+.++++.+.
T Consensus 349 -------------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~ 408 (755)
T TIGR01647 349 -------------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEK 408 (755)
T ss_pred -------------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHH
Confidence 0245677889999999999999998764 778899999999999999754 2456778888
Q ss_pred HHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHH
Q 003670 243 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 322 (804)
Q Consensus 243 l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L 322 (804)
+++++.+|+|++++|+|. .|.+|+|+|+++++||+|++++++|++|
T Consensus 409 ~~~~~~~G~rvl~vA~~~----------------------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l 454 (755)
T TIGR01647 409 VDELASRGYRALGVARTD----------------------------------EEGRWHFLGLLPLFDPPRHDTKETIERA 454 (755)
T ss_pred HHHHHhCCCEEEEEEEEc----------------------------------CCCCcEEEEEeeccCCChhhHHHHHHHH
Confidence 999999999999999972 1368999999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCC
Q 003670 323 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGG 402 (804)
Q Consensus 323 ~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (804)
+++||+++|+|||+..||.++|+++||..+. ...+.
T Consensus 455 ~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~--------------------------------------- 490 (755)
T TIGR01647 455 RHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YTADV--------------------------------------- 490 (755)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH---------------------------------------
Confidence 9999999999999999999999999995421 00000
Q ss_pred CCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcc
Q 003670 403 SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG 482 (804)
Q Consensus 403 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvG 482 (804)
+.+|..++..-+++ +.+....+ .+|+|++|+||..+|+.+|+ .|++|+|+|||.||+|||++||||
T Consensus 491 -------l~~~~~~~~~~~~~----~~~~~~~~--~vfAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDapAL~~AdVG 556 (755)
T TIGR01647 491 -------LLKGDNRDDLPSGE----LGEMVEDA--DGFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVG 556 (755)
T ss_pred -------hcCCcchhhCCHHH----HHHHHHhC--CEEEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccHHHHHhCCee
Confidence 01111111111112 22222233 39999999999999999998 899999999999999999999999
Q ss_pred eeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccchHHHH
Q 003670 483 IGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYNDWFL 560 (804)
Q Consensus 483 I~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~~ 560 (804)
|+|+ +....|+++||+++.+.++ +..+ +.+||..|+|+++.+.|.+..|+..++..++..++.++ + ++++++
T Consensus 557 IAm~-~gtdvAkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~---~-l~~~~i 630 (755)
T TIGR01647 557 IAVA-GATDAARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF---Y-FPPIMV 630 (755)
T ss_pred EEec-CCcHHHHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---c-hhHHHH
Confidence 9995 3445599999999998655 6666 89999999999999999999999987766665554433 3 889999
Q ss_pred HHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-CCCC
Q 003670 561 SLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAF-NDDG 639 (804)
Q Consensus 561 ~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~g 639 (804)
+|.|++.+. |.+++++.+.+.+ +.|+ ....+ +.+...+..|++.++..|.++++.+...++ ...+
T Consensus 631 l~~~l~~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (755)
T TIGR01647 631 VIIAILNDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFG 696 (755)
T ss_pred HHHHHHHhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccc
Confidence 999999885 7899987653321 2332 22222 344445678888888777776655531111 1111
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHH-hhcchh
Q 003670 640 KTVGRDIFGATMYTCIVWVVNLQLALA-ISYFTL 672 (804)
Q Consensus 640 ~~~~~~~~~t~~ft~~v~~~n~~~~l~-~~~~~~ 672 (804)
.......+.|++|+.++++..+.++.. ++.+.|
T Consensus 697 ~~~~~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~ 730 (755)
T TIGR01647 697 LQLLHGNLQSLIYLQVSISGQATIFVTRTHGFFW 730 (755)
T ss_pred ccccHhhhHHHHHHHHHHHHHHHHheeccCCCCc
Confidence 111233678999999999988887653 333444
No 20
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-48 Score=427.21 Aligned_cols=598 Identities=19% Similarity=0.225 Sum_probs=372.8
Q ss_pred CCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccccc
Q 003670 7 DTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLTE 86 (804)
Q Consensus 7 ~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (804)
+.++.|.-+=-+-=.|+||+.|||||||||+..|.|..+ +|..-..+ ..
T Consensus 462 k~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gv--ag~~~~~~-------------~~---------------- 510 (1160)
T KOG0209|consen 462 KLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGV--AGLSADEG-------------AL---------------- 510 (1160)
T ss_pred HhceeecCccccccCCceeEEEecCCCccccccEEEEec--ccccCCcc-------------cc----------------
Confidence 345555555555668999999999999999999999875 33110000 00
Q ss_pred CCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEeec
Q 003670 87 SRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRT 166 (804)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~ 166 (804)
.+-++.-.+-.+++|.||+...-.++ ..++|.|+|.+++ .|+.+...+
T Consensus 511 ----------------------~~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~ 558 (1160)
T KOG0209|consen 511 ----------------------TPASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKN 558 (1160)
T ss_pred ----------------------cchhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCc
Confidence 00011112456799999999876543 2479999999875 566655422
Q ss_pred CCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCC----CeEEEEEcCchhHhHHHhhccCcccHHHHHHH
Q 003670 167 QTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEE----GKILLLCKGADSVMFDRLAKNGRDFEVETRDH 242 (804)
Q Consensus 167 ~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 242 (804)
.+.-+. + .-...+|.+.+.|+|..|||||++.... -++++.+|||||+|.+++.. .+..+.+.
T Consensus 559 --~v~p~~-~------~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~i 625 (1160)
T KOG0209|consen 559 --SVCPRE-G------NGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEI 625 (1160)
T ss_pred --ccCCCc-C------CCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHH
Confidence 111111 1 1135788999999999999999998643 36899999999999999874 56677888
Q ss_pred HHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHH
Q 003670 243 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 322 (804)
Q Consensus 243 l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L 322 (804)
.++|+++|.|||+++||.+..-- ..+.-|..++.+|.||+|.|.+.|.-|+|++++++|+.|
T Consensus 626 Yk~ytR~GsRVLALg~K~l~~~~------------------~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el 687 (1160)
T KOG0209|consen 626 YKRYTRQGSRVLALGYKPLGDMM------------------VSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKEL 687 (1160)
T ss_pred HHHHhhccceEEEEecccccccc------------------hhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHH
Confidence 88999999999999999987421 111123446789999999999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhccccc--ccC
Q 003670 323 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL--SAS 400 (804)
Q Consensus 323 ~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 400 (804)
++++++++|+|||++.||.++|+++|+......++.+..+... ..+... +.+ +.-.+ .+.
T Consensus 688 ~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~-~~~~w~---------s~d--------~t~~lp~~p~ 749 (1160)
T KOG0209|consen 688 NNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDG-NQLEWV---------SVD--------GTIVLPLKPG 749 (1160)
T ss_pred hccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCC-ceeeEe---------cCC--------CceeecCCCC
Confidence 9999999999999999999999999998876655555443211 111100 000 00000 000
Q ss_pred CC---CCCCeEEEEechhhhHhhhHH-HHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhh
Q 003670 401 GG---SSEAFALIIDGKSLTYALEDD-IKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGML 476 (804)
Q Consensus 401 ~~---~~~~~~lvi~G~~l~~~l~~~-~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml 476 (804)
+. --..+.+.++|..++.+...+ ++..+.+ .-||+|++|+||..++..+|+ .|+.|+|||||.||++||
T Consensus 750 ~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h------v~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGAL 822 (1160)
T KOG0209|consen 750 KKKTLLAETHDLCITGSALDHLQATDQLRRLIPH------VWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGAL 822 (1160)
T ss_pred ccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh------eeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhh
Confidence 00 123577899999999887754 3333333 239999999999999999999 999999999999999999
Q ss_pred hhcCcceeecCcch------hh----------------------------------------------------------
Q 003670 477 QEADIGIGISGVEG------MQ---------------------------------------------------------- 492 (804)
Q Consensus 477 ~~AdvGI~i~g~~~------~~---------------------------------------------------------- 492 (804)
+.||||||+-++.. .+
T Consensus 823 K~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p 902 (1160)
T KOG0209|consen 823 KQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDP 902 (1160)
T ss_pred hhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCc
Confidence 99999999743211 00
Q ss_pred ------hhcccchhcch--HhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccchHHHHHHHH
Q 003670 493 ------AVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYNDWFLSLYN 564 (804)
Q Consensus 493 ------a~~aaD~~i~~--f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n 564 (804)
|..||.|...- -..+.+. +..||......-+ +||-+++..++-.|.....+---.-|.+.|...-.
T Consensus 903 ~vKLGDASiAAPFTsK~asv~~v~~I-IrQGRctLVtTlQ-----MfKILALN~LisAYslSvlyldGVKfgD~QaTisG 976 (1160)
T KOG0209|consen 903 LVKLGDASIAAPFTSKLASVSSVTHI-IRQGRCTLVTTLQ-----MFKILALNCLISAYSLSVLYLDGVKFGDTQATISG 976 (1160)
T ss_pred cccccccccccccccccchHHHHHHH-HHhcchhHHHHHH-----HHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHH
Confidence 12333333221 2223333 8899988755443 44444444444444332221111237777777666
Q ss_pred HHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC---CCcc
Q 003670 565 VFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFND---DGKT 641 (804)
Q Consensus 565 ~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~---~g~~ 641 (804)
+++ .+.++.+....+-+.+.+.. |...+||...+...+++-..+-...+++.-.+.....-.. --..
T Consensus 977 lLl---a~cFlfISrskPLetLSkeR-------P~~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~ 1046 (1160)
T KOG0209|consen 977 LLL---AACFLFISRSKPLETLSKER-------PLPNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEK 1046 (1160)
T ss_pred HHH---HHHHhheecCCchhhHhhcC-------CCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcc
Confidence 554 23333343333333334444 4467899998888887777776665555544333211100 0112
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhhcch----hHHHHHHHHHHHHHHHHHH-HH-hhcCCCCCcchHHHHHHHHccCh
Q 003670 642 VGRDIFGATMYTCIVWVVNLQLALAISYFT----LIQHIFIWGSIALWYLFML-AY-GAITPTHSTNAYKVFIEALAPAP 715 (804)
Q Consensus 642 ~~~~~~~t~~ft~~v~~~n~~~~l~~~~~~----~~~~~~i~~si~~~~i~~~-i~-~~~~~~~~~~~~~~~~~~~~~~~ 715 (804)
++...+.+.+|......+-...+.+..-.+ ...|..+..+++....+.+ +. ...| -+. ..++.+....
T Consensus 1047 F~PsllNt~vyiisl~~QvsTFAVNY~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~p-eLn-----~~~~lV~mp~ 1120 (1160)
T KOG0209|consen 1047 FSPSLLNTTVYIISLAQQVSTFAVNYQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSP-ELN-----EKFELVDMPQ 1120 (1160)
T ss_pred cChhhhhhHHHHHHHHHHHHHhhhhccCcchhhhhhhccchHHHHHHHHHHHHHHHhccCh-hHH-----hheeeecccH
Confidence 223345555555544433333333322222 3445555444444332222 22 2222 111 1343443444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Q 003670 716 LFWLVTLFVVISTLIPYFAYSAIQMRFFPM 745 (804)
Q Consensus 716 ~~wl~~l~v~~~~ll~~~i~k~i~r~~~P~ 745 (804)
.+-..++.+.+.-+...+++--+-++++++
T Consensus 1121 ~fk~~ll~~l~lD~v~c~~~er~~~f~f~~ 1150 (1160)
T KOG0209|consen 1121 DFKIKLLAVLVLDFVLCYLVERVLKFFFGD 1150 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 555556666666666666666666666663
No 21
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3.4e-49 Score=453.73 Aligned_cols=353 Identities=20% Similarity=0.259 Sum_probs=279.3
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+.+++++++|+++.+|.||.+++||||||||||+|++.+.++...+ +
T Consensus 278 r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~-----~---------------------------- 324 (673)
T PRK14010 278 RVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK-----S---------------------------- 324 (673)
T ss_pred HHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-----C----------------------------
Confidence 5678999999999999999999999999999999776665532110 0
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
...++++.+.++|+.. ..||.+.|+++++++.|+...
T Consensus 325 -----------------------------~~~~~ll~~a~~~~~~--------------s~~P~~~AIv~~a~~~~~~~~ 361 (673)
T PRK14010 325 -----------------------------SSFERLVKAAYESSIA--------------DDTPEGRSIVKLAYKQHIDLP 361 (673)
T ss_pred -----------------------------ccHHHHHHHHHHhcCC--------------CCChHHHHHHHHHHHcCCCch
Confidence 0123456677777542 249999999999998765321
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHHH
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHV 243 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l 243 (804)
. ......||++++|+|++.++ ++ .+.|||++.+.++|...+......+.+.+
T Consensus 362 ~-----------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 362 Q-----------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred h-----------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 0 01123799999999999753 33 45699999999999865544455677778
Q ss_pred HHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHH
Q 003670 244 NKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLA 323 (804)
Q Consensus 244 ~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~ 323 (804)
++++++|+|+++++. |++++|+++++|++|++++++|++||
T Consensus 414 ~~~a~~G~~~l~v~~---------------------------------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr 454 (673)
T PRK14010 414 KGVSKKGGTPLVVLE---------------------------------------DNEILGVIYLKDVIKDGLVERFRELR 454 (673)
T ss_pred HHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEeecCCcHHHHHHHHHHH
Confidence 899999999998762 78999999999999999999999999
Q ss_pred hcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCCC
Q 003670 324 QAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGS 403 (804)
Q Consensus 324 ~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (804)
++||+++|+|||+..||.+||+++|+..
T Consensus 455 ~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------------------------------------------- 482 (673)
T PRK14010 455 EMGIETVMCTGDNELTAATIAKEAGVDR---------------------------------------------------- 482 (673)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCce----------------------------------------------------
Confidence 9999999999999999999999999831
Q ss_pred CCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcce
Q 003670 404 SEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGI 483 (804)
Q Consensus 404 ~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI 483 (804)
+++|++|+||.++|+.+|+ .|+.|+|+|||.||+|+|++|||||
T Consensus 483 -----------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa~ADVGI 526 (673)
T PRK14010 483 -----------------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGDGTNDAPALAEANVGL 526 (673)
T ss_pred -----------------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECCChhhHHHHHhCCEEE
Confidence 8999999999999999998 8999999999999999999999999
Q ss_pred eecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccchHHH--
Q 003670 484 GISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYNDWF-- 559 (804)
Q Consensus 484 ~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~-- 559 (804)
+|+ +....|+++||+++.+.++ +... +.+||..|.++++++.|.+..|+..++..+...+...|.+...+|-+.
T Consensus 527 AMg-sGTdvAkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~ 604 (673)
T PRK14010 527 AMN-SGTMSAKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLH 604 (673)
T ss_pred EeC-CCCHHHHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccchhhccccCC
Confidence 995 4455599999999998555 7776 899999999999999999999999988877765555444433333222
Q ss_pred --------HHHHHHHH--hhhhHHHHhccccCCChhhhhc
Q 003670 560 --------LSLYNVFF--TSLPVIALGVFDQDVSARFCLK 589 (804)
Q Consensus 560 --------~~~~n~~~--~~lp~~~l~~~~~d~~~~~~~~ 589 (804)
-+.||-+. ..+|.-.-|+-.++.+...+++
T Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
T PRK14010 605 SPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILM 644 (673)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHh
Confidence 24555443 2345445566666666655443
No 22
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5.8e-48 Score=443.94 Aligned_cols=356 Identities=21% Similarity=0.269 Sum_probs=280.6
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+..++++++|+++++|.||++++||||||||||+|+|.+.+++..+. .
T Consensus 278 r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~--------------------------- 325 (679)
T PRK01122 278 RVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-----V--------------------------- 325 (679)
T ss_pred HHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC-----C---------------------------
Confidence 46789999999999999999999999999999999999988753210 0
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHH-cCcEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARE-LGFEF 162 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~-~g~~~ 162 (804)
..++++.+.++|+.. ..||...|+++++++ .|+..
T Consensus 326 ------------------------------~~~~ll~~a~~~s~~--------------s~hP~~~AIv~~a~~~~~~~~ 361 (679)
T PRK01122 326 ------------------------------TEEELADAAQLSSLA--------------DETPEGRSIVVLAKQRFNLRE 361 (679)
T ss_pred ------------------------------CHHHHHHHHHHhcCC--------------CCCchHHHHHHHHHhhcCCCc
Confidence 012456677777543 248999999999986 34311
Q ss_pred EeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHH
Q 003670 163 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 242 (804)
Q Consensus 163 ~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 242 (804)
. +..++.....||++.+|+|++.+. | ..|+|||++.+.+.|...+...++++.+.
T Consensus 362 ~--------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~ 416 (679)
T PRK01122 362 R--------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGGHFPAELDAA 416 (679)
T ss_pred h--------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCCcChHHHHHH
Confidence 0 112445667899999988887653 4 57899999999999977665666788888
Q ss_pred HHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHH
Q 003670 243 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 322 (804)
Q Consensus 243 l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L 322 (804)
+++++++|+|++++|+ |++++|+++++|++|+|++++|++|
T Consensus 417 ~~~~a~~G~~~l~va~---------------------------------------~~~~lG~i~l~D~~R~~~~eai~~L 457 (679)
T PRK01122 417 VDEVARKGGTPLVVAE---------------------------------------DNRVLGVIYLKDIVKPGIKERFAEL 457 (679)
T ss_pred HHHHHhCCCcEEEEEE---------------------------------------CCeEEEEEEEeccCchhHHHHHHHH
Confidence 9999999999999994 6789999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCC
Q 003670 323 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGG 402 (804)
Q Consensus 323 ~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (804)
|++||+++|+|||+..||.+||+++|+..
T Consensus 458 r~~GI~vvMiTGDn~~TA~aIA~elGId~--------------------------------------------------- 486 (679)
T PRK01122 458 RKMGIKTVMITGDNPLTAAAIAAEAGVDD--------------------------------------------------- 486 (679)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCcE---------------------------------------------------
Confidence 99999999999999999999999999821
Q ss_pred CCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcc
Q 003670 403 SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG 482 (804)
Q Consensus 403 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvG 482 (804)
+++|++|+||..+|+.+|+ .|+.|+|+|||.||.|||++||||
T Consensus 487 ------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa~ADVG 529 (679)
T PRK01122 487 ------------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVG 529 (679)
T ss_pred ------------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHHhCCEe
Confidence 8999999999999999998 899999999999999999999999
Q ss_pred eeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccchHHH-
Q 003670 483 IGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYNDWF- 559 (804)
Q Consensus 483 I~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~~- 559 (804)
|+|+ +....|+++||+++.+.++ +... +..||...-.-..+..|++...++-+|.++-..|...|.+...+|-+.
T Consensus 530 IAMg-sGTdvAkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~~~~~~~~l 607 (679)
T PRK01122 530 VAMN-SGTQAAKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQLNALNIMHL 607 (679)
T ss_pred EEeC-CCCHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCccccccccccC
Confidence 9995 4445599999999998555 6666 899999997777778888887777666555444444333433333222
Q ss_pred ---------HHHHHHHH--hhhhHHHHhccccCCChhhhhc
Q 003670 560 ---------LSLYNVFF--TSLPVIALGVFDQDVSARFCLK 589 (804)
Q Consensus 560 ---------~~~~n~~~--~~lp~~~l~~~~~d~~~~~~~~ 589 (804)
-+.||-+. ..+|.-.-|+-.++.+...+++
T Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (679)
T PRK01122 608 HSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLR 648 (679)
T ss_pred CChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHh
Confidence 24555543 2345445566666666655443
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=6.4e-46 Score=426.02 Aligned_cols=356 Identities=21% Similarity=0.265 Sum_probs=281.9
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+..++++++|++..+|.||++++||||||||||+|+|++.+++..+. .
T Consensus 279 r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~--------------------------- 326 (675)
T TIGR01497 279 RVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----V--------------------------- 326 (675)
T ss_pred HHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----C---------------------------
Confidence 45789999999999999999999999999999999999998753210 0
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
..++++.+.++|+.. ..||.+.|++++|++.|....
T Consensus 327 ------------------------------~~~~ll~~aa~~~~~--------------s~hP~a~Aiv~~a~~~~~~~~ 362 (675)
T TIGR01497 327 ------------------------------DEKTLADAAQLASLA--------------DDTPEGKSIVILAKQLGIRED 362 (675)
T ss_pred ------------------------------cHHHHHHHHHHhcCC--------------CCCcHHHHHHHHHHHcCCCcc
Confidence 012566777777543 258999999999998775321
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHHH
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHV 243 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l 243 (804)
. ..++.....||++.+++|++.+. +| ..++||+++.+.+.|...+...++.+.+.+
T Consensus 363 ~--------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~ 418 (675)
T TIGR01497 363 D--------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAV 418 (675)
T ss_pred c--------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHH
Confidence 1 12234567899999877776554 34 578999999999988766555667788889
Q ss_pred HHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHH
Q 003670 244 NKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLA 323 (804)
Q Consensus 244 ~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~ 323 (804)
++++++|+|++++|+ |.+++|+++++|++|++++++|++|+
T Consensus 419 ~~~a~~G~r~l~va~---------------------------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~ 459 (675)
T TIGR01497 419 DQVARQGGTPLVVCE---------------------------------------DNRIYGVIYLKDIVKGGIKERFAQLR 459 (675)
T ss_pred HHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEecccchhHHHHHHHHHH
Confidence 999999999999995 46899999999999999999999999
Q ss_pred hcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCCC
Q 003670 324 QAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGS 403 (804)
Q Consensus 324 ~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (804)
++||+++|+|||+..||..+|+++|+..
T Consensus 460 ~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------------------------------------------- 487 (675)
T TIGR01497 460 KMGIKTIMITGDNRLTAAAIAAEAGVDD---------------------------------------------------- 487 (675)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------------------------------------------
Confidence 9999999999999999999999999821
Q ss_pred CCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcce
Q 003670 404 SEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGI 483 (804)
Q Consensus 404 ~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI 483 (804)
+++|++|++|..+|+.+|+ .++.|+|+|||.||.|||++|||||
T Consensus 488 -----------------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvGDG~NDapAL~~AdvGi 531 (675)
T TIGR01497 488 -----------------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTGDGTNDAPALAQADVGV 531 (675)
T ss_pred -----------------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHHhCCEeE
Confidence 7899999999999999998 7899999999999999999999999
Q ss_pred eecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccchHH---
Q 003670 484 GISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSGQPAYNDW--- 558 (804)
Q Consensus 484 ~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~~~~~~~~--- 558 (804)
+|+ .....|+++||+++.+.++ +... +..||..+-....+..|++..+++-+|.++-..|...|.+...+|-+
T Consensus 532 Am~-~gt~~akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (675)
T TIGR01497 532 AMN-SGTQAAKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQALNIMCLH 609 (675)
T ss_pred EeC-CCCHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchhhhccccCC
Confidence 995 3444589999999998555 6666 89999999999999999999999887766655444443333222222
Q ss_pred -------HHHHHHHHH--hhhhHHHHhccccCCChhhhh
Q 003670 559 -------FLSLYNVFF--TSLPVIALGVFDQDVSARFCL 588 (804)
Q Consensus 559 -------~~~~~n~~~--~~lp~~~l~~~~~d~~~~~~~ 588 (804)
.-+.||-+. ..+|.-.-|+-.++.+...++
T Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (675)
T TIGR01497 610 SPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALL 648 (675)
T ss_pred ChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHH
Confidence 124555543 234444556666666665544
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=3.3e-41 Score=386.83 Aligned_cols=272 Identities=37% Similarity=0.501 Sum_probs=234.3
Q ss_pred CCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccc
Q 003670 5 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 84 (804)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (804)
..++++++|+++.+|+||++++||||||||||+|+|+|.++++.+.
T Consensus 211 ~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------- 256 (499)
T TIGR01494 211 LAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------- 256 (499)
T ss_pred HHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------------
Confidence 4567999999999999999999999999999999999999865421
Q ss_pred ccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEe
Q 003670 85 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQ 164 (804)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~ 164 (804)
++.++||+|.|++++++..+
T Consensus 257 -------------------------------------------------------~~~s~hp~~~ai~~~~~~~~----- 276 (499)
T TIGR01494 257 -------------------------------------------------------EYLSGHPDERALVKSAKWKI----- 276 (499)
T ss_pred -------------------------------------------------------CcCCCChHHHHHHHHhhhcC-----
Confidence 01246999999999886421
Q ss_pred ecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHHHH
Q 003670 165 RTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVN 244 (804)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~ 244 (804)
+...||++.+++|+++++.+++ .|+||+++.+.+.|.. +.+.++
T Consensus 277 -------------------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~ 320 (499)
T TIGR01494 277 -------------------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVK 320 (499)
T ss_pred -------------------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHH
Confidence 2357999999999999987444 4789999999988742 334556
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
+++.+|+|++++|++ .+++|+++++|++|++++++|+.|++
T Consensus 321 ~~~~~g~~~~~~a~~---------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~ 361 (499)
T TIGR01494 321 ELAQSGLRVLAVASK---------------------------------------ETLLGLLGLEDPLRDDAKETISELRE 361 (499)
T ss_pred HHHhCCCEEEEEEEC---------------------------------------CeEEEEEEecCCCchhHHHHHHHHHH
Confidence 788999999999973 27999999999999999999999999
Q ss_pred cCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCCCC
Q 003670 325 AGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSS 404 (804)
Q Consensus 325 aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (804)
+|+++||+|||+.++|..+|+++|+
T Consensus 362 ~gi~~~~ltGD~~~~a~~ia~~lgi------------------------------------------------------- 386 (499)
T TIGR01494 362 AGIRVIMLTGDNVLTAKAIAKELGI------------------------------------------------------- 386 (499)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHcCc-------------------------------------------------------
Confidence 9999999999999999999999873
Q ss_pred CCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCccee
Q 003670 405 EAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIG 484 (804)
Q Consensus 405 ~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~ 484 (804)
+++++|++|+.+|+.+|+ .|+.|+|+|||.||++|++.|||||+
T Consensus 387 -----------------------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia 430 (499)
T TIGR01494 387 -----------------------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIA 430 (499)
T ss_pred -----------------------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccc
Confidence 477889999999999998 78999999999999999999999999
Q ss_pred ecCcchhhhhcccchhcchHhh-HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHH
Q 003670 485 ISGVEGMQAVMSSDIAIAQFRY-LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFL 542 (804)
Q Consensus 485 i~g~~~~~a~~aaD~~i~~f~~-l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~ 542 (804)
|. |+.+||+++.+++. ....++.+||..++++++.+.|.+++|+..+...++
T Consensus 431 ~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 431 MG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred cc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 94 67889999998554 233448999999999999999999999997766665
No 25
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-43 Score=379.60 Aligned_cols=350 Identities=21% Similarity=0.270 Sum_probs=270.3
Q ss_pred cCCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEE----EEEcCeecCCCchHHHHHhhhcCCCCccccccCC
Q 003670 3 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK----CSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGL 78 (804)
Q Consensus 3 ~~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (804)
|+-+++++++++..+.|+|+.+|++|||||||||.|++.+.+ +...|.+
T Consensus 306 ~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~--------------------------- 358 (942)
T KOG0205|consen 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD--------------------------- 358 (942)
T ss_pred HHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC---------------------------
Confidence 556789999999999999999999999999999999999976 2222211
Q ss_pred CCccccccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHc
Q 003670 79 NTEEDLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAAREL 158 (804)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~ 158 (804)
+ ..+++..|... .. ++.+..|.|++...+.-
T Consensus 359 ---------------------------------~---D~~~L~A~rAs--r~-----------en~DAID~A~v~~L~dP 389 (942)
T KOG0205|consen 359 ---------------------------------K---DDVLLTAARAS--RK-----------ENQDAIDAAIVGMLADP 389 (942)
T ss_pred ---------------------------------h---HHHHHHHHHHh--hh-----------cChhhHHHHHHHhhcCH
Confidence 0 01222222222 11 13578999998765421
Q ss_pred CcEEEeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHH
Q 003670 159 GFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVE 238 (804)
Q Consensus 159 g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~ 238 (804)
+..+..|+.++.+|||+..||....+.+++|+.+..+||||+.|++.|.... +.+++
T Consensus 390 ----------------------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~ 446 (942)
T KOG0205|consen 390 ----------------------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPER 446 (942)
T ss_pred ----------------------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHH
Confidence 2235689999999999999999999999999999999999999999998754 68899
Q ss_pred HHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHH
Q 003670 239 TRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDC 318 (804)
Q Consensus 239 ~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~ 318 (804)
..+.+++|+++|+|.|++|++..++..- +.-...++|+|+.-+-||+|.+..++
T Consensus 447 vh~~id~~AeRGlRSLgVArq~v~e~~~--------------------------~~~g~pw~~~gllp~fdpprhdsa~t 500 (942)
T KOG0205|consen 447 VHSIIDKFAERGLRSLAVARQEVPEKTK--------------------------ESPGGPWEFVGLLPLFDPPRHDSAET 500 (942)
T ss_pred HHHHHHHHHHhcchhhhhhhhccccccc--------------------------cCCCCCcccccccccCCCCccchHHH
Confidence 9999999999999999999998776420 12235789999999999999999999
Q ss_pred HHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccc
Q 003670 319 IDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLS 398 (804)
Q Consensus 319 I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (804)
|++....|..|.|+|||...-+...++++|+-.+-..- ...+.
T Consensus 501 irral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyps-------------------------------------s~llG 543 (942)
T KOG0205|consen 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-------------------------------------SALLG 543 (942)
T ss_pred HHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCc-------------------------------------hhhcc
Confidence 99999999999999999999999999999974432110 00000
Q ss_pred cCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhh
Q 003670 399 ASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQE 478 (804)
Q Consensus 399 ~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~ 478 (804)
..++ --+.|...+...+ ++.-|+.+.|+||..+|+.+|+ .++.++|.|||+||.|+++.
T Consensus 544 ~~~~------~~~~~~~v~elie--------------~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKk 602 (942)
T KOG0205|consen 544 LGKD------GSMPGSPVDELIE--------------KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKK 602 (942)
T ss_pred CCCC------CCCCCCcHHHHhh--------------hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcc
Confidence 0000 0112222222211 2337899999999999999998 89999999999999999999
Q ss_pred cCcceeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHH
Q 003670 479 ADIGIGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFG 537 (804)
Q Consensus 479 AdvGI~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~ 537 (804)
||+||++.+.... |..+||+++..-.. +... +..+|.+|+|++.+..|.+.-.+-.+
T Consensus 603 Adigiava~atda-ar~asdiVltepglSviI~a-vltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 603 ADIGIAVADATDA-ARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred cccceeeccchhh-hcccccEEEcCCCchhhHHH-HHHHHHHHHHHhhheeeeehhHHHHH
Confidence 9999999765543 88999999988444 4444 67899999999999999886655544
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-37 Score=352.36 Aligned_cols=295 Identities=24% Similarity=0.291 Sum_probs=229.2
Q ss_pred CCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccc
Q 003670 5 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 84 (804)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (804)
..++|+++|+.+.+|.|+++|+|+||||||||+|++++..+...+. ++
T Consensus 386 aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~------~e-------------------------- 433 (713)
T COG2217 386 AARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG------DE-------------------------- 433 (713)
T ss_pred HHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC------CH--------------------------
Confidence 3578999999999999999999999999999999999998865421 00
Q ss_pred ccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEe
Q 003670 85 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQ 164 (804)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~ 164 (804)
.+++..++.- +-.++||..+|++++|++.|..-..
T Consensus 434 -------------------------------~~~L~laAal--------------E~~S~HPiA~AIv~~a~~~~~~~~~ 468 (713)
T COG2217 434 -------------------------------DELLALAAAL--------------EQHSEHPLAKAIVKAAAERGLPDVE 468 (713)
T ss_pred -------------------------------HHHHHHHHHH--------------HhcCCChHHHHHHHHHHhcCCCCcc
Confidence 1223222221 1125799999999999887621111
Q ss_pred ecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHHHH
Q 003670 165 RTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVN 244 (804)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~ 244 (804)
.++ .+| .+.....+ +| ..+.-|.+..+.+. +.+... .....+
T Consensus 469 ---------------------~~~---~i~----G~Gv~~~v---~g--~~v~vG~~~~~~~~----~~~~~~-~~~~~~ 510 (713)
T COG2217 469 ---------------------DFE---EIP----GRGVEAEV---DG--ERVLVGNARLLGEE----GIDLPL-LSERIE 510 (713)
T ss_pred ---------------------cee---eec----cCcEEEEE---CC--EEEEEcCHHHHhhc----CCCccc-hhhhHH
Confidence 010 011 11111111 33 23334888776532 111222 566778
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
.+..+|..++.++. |.+++|+++++|++|++++++|+.|++
T Consensus 511 ~~~~~G~t~v~va~---------------------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~ 551 (713)
T COG2217 511 ALESEGKTVVFVAV---------------------------------------DGKLVGVIALADELRPDAKEAIAALKA 551 (713)
T ss_pred HHHhcCCeEEEEEE---------------------------------------CCEEEEEEEEeCCCChhHHHHHHHHHH
Confidence 88899999888885 679999999999999999999999999
Q ss_pred cCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCCCC
Q 003670 325 AGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSS 404 (804)
Q Consensus 325 aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (804)
.||++.|+|||+..+|..||+++||..
T Consensus 552 ~Gi~~~mLTGDn~~~A~~iA~~lGId~----------------------------------------------------- 578 (713)
T COG2217 552 LGIKVVMLTGDNRRTAEAIAKELGIDE----------------------------------------------------- 578 (713)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHcChHh-----------------------------------------------------
Confidence 999999999999999999999999821
Q ss_pred CCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCccee
Q 003670 405 EAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIG 484 (804)
Q Consensus 405 ~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~ 484 (804)
+.+.+.|++|+++|+.+|+ .|++|+|+|||.||.|+|..|||||+
T Consensus 579 ----------------------------------v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiA 623 (713)
T COG2217 579 ----------------------------------VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIA 623 (713)
T ss_pred ----------------------------------heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEe
Confidence 8899999999999999998 89999999999999999999999999
Q ss_pred ecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHH
Q 003670 485 ISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLY 543 (804)
Q Consensus 485 i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~ 543 (804)
|+. ....|+++||+++.+.+. +... +..+|..++++++.+.|.|.+|.+++.+..+.
T Consensus 624 mG~-GtDvA~eaADvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 624 MGS-GTDVAIEAADVVLMRDDLSAVPEA-IDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred ecC-CcHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 953 444499999999998554 5555 88999999999999999999999877655543
No 27
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-35 Score=326.90 Aligned_cols=301 Identities=22% Similarity=0.240 Sum_probs=231.3
Q ss_pred CCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccccc
Q 003670 6 ADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDLT 85 (804)
Q Consensus 6 ~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (804)
+.+|+++|..+.+|.+.+|++|+||||||||+|++.+.+..+.+...
T Consensus 564 A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~--------------------------------- 610 (951)
T KOG0207|consen 564 ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI--------------------------------- 610 (951)
T ss_pred hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc---------------------------------
Confidence 57899999999999999999999999999999999999987654320
Q ss_pred cCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEee
Q 003670 86 ESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQR 165 (804)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~ 165 (804)
..++++...+.- | -.++||...|++++|++.+ .
T Consensus 611 ----------------------------~~~e~l~~v~a~-----E---------s~SeHPig~AIv~yak~~~-----~ 643 (951)
T KOG0207|consen 611 ----------------------------SLKEALALVAAM-----E---------SGSEHPIGKAIVDYAKEKL-----V 643 (951)
T ss_pred ----------------------------cHHHHHHHHHHH-----h---------cCCcCchHHHHHHHHHhcc-----c
Confidence 012333222221 1 1247999999999999886 1
Q ss_pred cCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHHHHH
Q 003670 166 TQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVNK 245 (804)
Q Consensus 166 ~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~ 245 (804)
.++...+. ..-.|.-..+...+.+. ..+ .+-|.-+.|.. ++....++++..+++
T Consensus 644 ~~~~~~~~-----------------~~~~~pg~g~~~~~~~~--~~~---i~iGN~~~~~r----~~~~~~~~i~~~~~~ 697 (951)
T KOG0207|consen 644 EPNPEGVL-----------------SFEYFPGEGIYVTVTVD--GNE---VLIGNKEWMSR----NGCSIPDDILDALTE 697 (951)
T ss_pred ccCccccc-----------------eeecccCCCcccceEEe--eeE---EeechHHHHHh----cCCCCchhHHHhhhh
Confidence 11111111 11112222212122221 122 23376655533 333445668888888
Q ss_pred HHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHhc
Q 003670 246 YADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQA 325 (804)
Q Consensus 246 ~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~a 325 (804)
-...|..+.+++. |.++.|+++++|++|+++..+|+.|++.
T Consensus 698 ~e~~g~tvv~v~v---------------------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~ 738 (951)
T KOG0207|consen 698 SERKGQTVVYVAV---------------------------------------NGQLVGVFALEDQVRPDAALAVAELKSM 738 (951)
T ss_pred HhhcCceEEEEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHHHHhc
Confidence 8999999999985 7899999999999999999999999999
Q ss_pred CCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCCCCC
Q 003670 326 GIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSSE 405 (804)
Q Consensus 326 GIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (804)
||++.|+|||+..+|.++|+++|+-
T Consensus 739 Gi~v~mLTGDn~~aA~svA~~VGi~------------------------------------------------------- 763 (951)
T KOG0207|consen 739 GIKVVMLTGDNDAAARSVAQQVGID------------------------------------------------------- 763 (951)
T ss_pred CceEEEEcCCCHHHHHHHHHhhCcc-------------------------------------------------------
Confidence 9999999999999999999999952
Q ss_pred CeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcceee
Q 003670 406 AFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGI 485 (804)
Q Consensus 406 ~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i 485 (804)
.|+|++.|+||...|+.+|+ .+..|+|+|||.||.|+|.+|||||+|
T Consensus 764 --------------------------------~V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIai 810 (951)
T KOG0207|consen 764 --------------------------------NVYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAI 810 (951)
T ss_pred --------------------------------eEEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceee
Confidence 19999999999999999998 789999999999999999999999999
Q ss_pred cCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHH
Q 003670 486 SGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVF 541 (804)
Q Consensus 486 ~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 541 (804)
... ...|.++||+++...+. +... +..+|...+|++..+.|.+.+|++.+.+..
T Consensus 811 g~g-s~vAieaADIVLmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 811 GAG-SDVAIEAADIVLMRNDLRDVPFA-IDLSRKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred ccc-cHHHHhhCCEEEEccchhhhHHH-HHHHHHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 533 44599999999998544 3333 788999999999999999999988655433
No 28
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=7.3e-35 Score=345.51 Aligned_cols=289 Identities=22% Similarity=0.252 Sum_probs=224.5
Q ss_pred CCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccc
Q 003670 5 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 84 (804)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (804)
.+++|+++|+.+.+|.|+++++||||||||||+|+|++.++...+. .+
T Consensus 417 aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~-----~~--------------------------- 464 (741)
T PRK11033 417 AARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG-----IS--------------------------- 464 (741)
T ss_pred HHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC-----CC---------------------------
Confidence 3678999999999999999999999999999999999998753221 00
Q ss_pred ccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEe
Q 003670 85 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQ 164 (804)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~ 164 (804)
.++++...+.. + ..+.||.+.|+++++++.|..
T Consensus 465 ------------------------------~~~~l~~aa~~-----e---------~~s~hPia~Ai~~~a~~~~~~--- 497 (741)
T PRK11033 465 ------------------------------ESELLALAAAV-----E---------QGSTHPLAQAIVREAQVRGLA--- 497 (741)
T ss_pred ------------------------------HHHHHHHHHHH-----h---------cCCCCHHHHHHHHHHHhcCCC---
Confidence 01233322221 1 114699999999999876531
Q ss_pred ecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEE-EEEE-cCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHH
Q 003670 165 RTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMS-VIIR-DEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 242 (804)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrms-viv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 242 (804)
+||.++++.+. .-++ .-+|+. +.-|+++.+.+ ..+...+.
T Consensus 498 ----------------------------~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------~~~~~~~~ 539 (741)
T PRK11033 498 ----------------------------IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------LADAFAGQ 539 (741)
T ss_pred ----------------------------CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------ccHHHHHH
Confidence 34555555542 1122 123432 22388877643 12345566
Q ss_pred HHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHH
Q 003670 243 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 322 (804)
Q Consensus 243 l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L 322 (804)
++++..+|+|++++|+ |.+++|+++++|++|++++++|+.|
T Consensus 540 ~~~~~~~g~~~v~va~---------------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L 580 (741)
T PRK11033 540 INELESAGKTVVLVLR---------------------------------------NDDVLGLIALQDTLRADARQAISEL 580 (741)
T ss_pred HHHHHhCCCEEEEEEE---------------------------------------CCEEEEEEEEecCCchhHHHHHHHH
Confidence 7789999999999995 6789999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCC
Q 003670 323 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGG 402 (804)
Q Consensus 323 ~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (804)
++.|++++|+|||+..+|..+|+++|+.
T Consensus 581 ~~~gi~~~llTGd~~~~a~~ia~~lgi~---------------------------------------------------- 608 (741)
T PRK11033 581 KALGIKGVMLTGDNPRAAAAIAGELGID---------------------------------------------------- 608 (741)
T ss_pred HHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------------------------------
Confidence 9999999999999999999999999972
Q ss_pred CCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcc
Q 003670 403 SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG 482 (804)
Q Consensus 403 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvG 482 (804)
..++..|++|..+|+.+++ . ..|+|+|||.||.+||+.||||
T Consensus 609 ------------------------------------~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vg 650 (741)
T PRK11033 609 ------------------------------------FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIG 650 (741)
T ss_pred ------------------------------------eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCee
Confidence 3455679999999999986 3 5899999999999999999999
Q ss_pred eeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHH
Q 003670 483 IGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVF 541 (804)
Q Consensus 483 I~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 541 (804)
|+|++ ....++++||+++.+.+. +..+ +..||..++++++.+.|.+..|+.++.+.+
T Consensus 651 ia~g~-~~~~a~~~adivl~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 651 IAMGS-GTDVALETADAALTHNRLRGLAQM-IELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred EEecC-CCHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99953 445588999999987444 5555 899999999999999999999977654443
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=3e-33 Score=324.09 Aligned_cols=299 Identities=22% Similarity=0.270 Sum_probs=226.4
Q ss_pred CCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccc
Q 003670 5 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 84 (804)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (804)
..++++++|+++.+|.||++++||||||||||+|+|++.++...+...
T Consensus 227 ~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------------------------- 274 (556)
T TIGR01525 227 AARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------------------------- 274 (556)
T ss_pred HHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--------------------------------
Confidence 467899999999999999999999999999999999999886542110
Q ss_pred ccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEe
Q 003670 85 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQ 164 (804)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~ 164 (804)
. ...+++..++.+.. ...||.+.|+++++++.|.....
T Consensus 275 --------------------------~--~~~~~l~~a~~~e~--------------~~~hp~~~Ai~~~~~~~~~~~~~ 312 (556)
T TIGR01525 275 --------------------------I--SEEELLALAAALEQ--------------SSSHPLARAIVRYAKKRGLELPK 312 (556)
T ss_pred --------------------------c--cHHHHHHHHHHHhc--------------cCCChHHHHHHHHHHhcCCCccc
Confidence 0 01123333222211 13699999999999987643211
Q ss_pred ecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHHHH
Q 003670 165 RTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVN 244 (804)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~ 244 (804)
+. ++ ..+ ..++++..++ |. ..+..|+++.+. ... ...+.....++
T Consensus 313 --~~-----------------~~---~~~----~~~gi~~~~~---g~-~~~~lg~~~~~~----~~~-~~~~~~~~~~~ 357 (556)
T TIGR01525 313 --QE-----------------DV---EEV----PGKGVEATVD---GQ-EEVRIGNPRLLE----LAA-EPISASPDLLN 357 (556)
T ss_pred --cc-----------------Ce---eEe----cCCeEEEEEC---Ce-eEEEEecHHHHh----hcC-CCchhhHHHHH
Confidence 00 00 000 1223333332 21 123347776551 111 11223345677
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
+++.+|+|++.++. |.+++|.+.++|++++|++++|+.|++
T Consensus 358 ~~~~~g~~~~~v~~---------------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~ 398 (556)
T TIGR01525 358 EGESQGKTVVFVAV---------------------------------------DGELLGVIALRDQLRPEAKEAIAALKR 398 (556)
T ss_pred HHhhCCcEEEEEEE---------------------------------------CCEEEEEEEecccchHhHHHHHHHHHH
Confidence 88999999999884 679999999999999999999999999
Q ss_pred cC-CeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCCC
Q 003670 325 AG-IKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGS 403 (804)
Q Consensus 325 aG-Ikv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (804)
+| ++++|+|||+..++..+++++|+-.
T Consensus 399 ~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------------------------------------------- 426 (556)
T TIGR01525 399 AGGIKLVMLTGDNRSAAEAVAAELGIDE---------------------------------------------------- 426 (556)
T ss_pred cCCCeEEEEeCCCHHHHHHHHHHhCCCe----------------------------------------------------
Confidence 99 9999999999999999999999821
Q ss_pred CCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcce
Q 003670 404 SEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGI 483 (804)
Q Consensus 404 ~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI 483 (804)
+++++.|++|..+++.+++ .++.|+|+|||.||++|++.||+||
T Consensus 427 -----------------------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgi 470 (556)
T TIGR01525 427 -----------------------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGI 470 (556)
T ss_pred -----------------------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeE
Confidence 7788899999999999997 7889999999999999999999999
Q ss_pred eecCcchhhhhcccchhcch--HhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHH
Q 003670 484 GISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVF 541 (804)
Q Consensus 484 ~i~g~~~~~a~~aaD~~i~~--f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 541 (804)
++. .....++..||+++.+ +..+..+ +..||..++++++.+.|.+..|+..+.+.+
T Consensus 471 a~g-~~~~~~~~~Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 471 AMG-AGSDVAIEAADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred EeC-CCCHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 996 3444578899999996 4557776 899999999999999999999998765444
No 30
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-32 Score=286.10 Aligned_cols=311 Identities=20% Similarity=0.263 Sum_probs=240.2
Q ss_pred cCCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcc
Q 003670 3 YEEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEE 82 (804)
Q Consensus 3 ~~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (804)
|+.++-++++++..++|..|.||++..|||||+|-|.=.-.+....+
T Consensus 278 dRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~--------------------------------- 324 (681)
T COG2216 278 DRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVP--------------------------------- 324 (681)
T ss_pred hHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCC---------------------------------
Confidence 56788899999999999999999999999999997653333322111
Q ss_pred ccccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEE
Q 003670 83 DLTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEF 162 (804)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~ 162 (804)
.-..+++..+..+++-. .+.|+...+++.|++.|+..
T Consensus 325 -----------------------------gv~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~ 361 (681)
T COG2216 325 -----------------------------GVSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIEL 361 (681)
T ss_pred -----------------------------CCCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCC
Confidence 01123555565555333 25788999999999998554
Q ss_pred EeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHH
Q 003670 163 YQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDH 242 (804)
Q Consensus 163 ~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 242 (804)
..+... . -....||+.+.|...+-.. ++ .-..|||.+.|.......+...+++++..
T Consensus 362 ~~~~~~----------------~---~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~ 418 (681)
T COG2216 362 REDDLQ----------------S---HAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAA 418 (681)
T ss_pred Cccccc----------------c---cceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHH
Confidence 431100 0 1245799887765555432 33 56789999999999887777789999999
Q ss_pred HHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHH
Q 003670 243 VNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKL 322 (804)
Q Consensus 243 l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L 322 (804)
.++-++.|-.+|+++. |..++|++.++|-+|+|.+|-+.+|
T Consensus 419 ~~~vs~~GGTPL~V~~---------------------------------------~~~~~GVI~LkDivK~Gi~ERf~el 459 (681)
T COG2216 419 VDEVSRLGGTPLVVVE---------------------------------------NGRILGVIYLKDIVKPGIKERFAEL 459 (681)
T ss_pred HHHHHhcCCCceEEEE---------------------------------------CCEEEEEEEehhhcchhHHHHHHHH
Confidence 9999999999999984 7899999999999999999999999
Q ss_pred HhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCC
Q 003670 323 AQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGG 402 (804)
Q Consensus 323 ~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (804)
|+.|||.+|+|||++.||..||.+.|...
T Consensus 460 R~MgIkTvM~TGDN~~TAa~IA~EAGVDd--------------------------------------------------- 488 (681)
T COG2216 460 RKMGIKTVMITGDNPLTAAAIAAEAGVDD--------------------------------------------------- 488 (681)
T ss_pred HhcCCeEEEEeCCCHHHHHHHHHHhCchh---------------------------------------------------
Confidence 99999999999999999999999999721
Q ss_pred CCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcc
Q 003670 403 SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG 482 (804)
Q Consensus 403 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvG 482 (804)
..++++|++|..+++.-|. .|+.|+|+|||.||.|+|.+||||
T Consensus 489 ------------------------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg 531 (681)
T COG2216 489 ------------------------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVG 531 (681)
T ss_pred ------------------------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchh
Confidence 5678899999999999998 899999999999999999999999
Q ss_pred eeecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHH
Q 003670 483 IGISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVF 541 (804)
Q Consensus 483 I~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 541 (804)
++| ++....|+++++.+=.|-+. |... +.-|+...-.-..+..|++...++-+|.++
T Consensus 532 ~AM-NsGTqAAkEAaNMVDLDS~PTKliev-V~IGKqlLiTRGaLTTFSIANDvAKYFaIi 590 (681)
T COG2216 532 VAM-NSGTQAAKEAANMVDLDSNPTKLIEV-VEIGKQLLITRGALTTFSIANDVAKYFAII 590 (681)
T ss_pred hhh-ccccHHHHHhhcccccCCCccceehH-hhhhhhheeecccceeeehhhHHHHHHHHH
Confidence 999 33444489999998766333 2222 455666655555566666666555444333
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.98 E-value=1.9e-31 Score=308.06 Aligned_cols=288 Identities=23% Similarity=0.321 Sum_probs=218.2
Q ss_pred CCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccc
Q 003670 5 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 84 (804)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (804)
.+++++++|+++.+|.|+++++||||||||||+|+|++.++...+..
T Consensus 258 aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~--------------------------------- 304 (562)
T TIGR01511 258 AAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR--------------------------------- 304 (562)
T ss_pred HHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC---------------------------------
Confidence 46789999999999999999999999999999999999987532110
Q ss_pred ccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEe
Q 003670 85 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQ 164 (804)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~ 164 (804)
.. ++++..++.+.. .+.||.+.|+++++++.|.....
T Consensus 305 --------------------------~~---~~~l~~aa~~e~--------------~s~HPia~Ai~~~~~~~~~~~~~ 341 (562)
T TIGR01511 305 --------------------------DR---TELLALAAALEA--------------GSEHPLAKAIVSYAKEKGITLVE 341 (562)
T ss_pred --------------------------CH---HHHHHHHHHHhc--------------cCCChHHHHHHHHHHhcCCCcCC
Confidence 00 123333222111 13699999999999887643211
Q ss_pred ecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHHHH
Q 003670 165 RTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHVN 244 (804)
Q Consensus 165 ~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~ 244 (804)
- ..++ .. ..+.+...+. | ..+..|+++.+.+ .+... .
T Consensus 342 ~-------------------~~~~---~~----~g~Gi~~~~~---g--~~~~iG~~~~~~~----~~~~~--------~ 378 (562)
T TIGR01511 342 V-------------------SDFK---AI----PGIGVEGTVE---G--TKIQLGNEKLLGE----NAIKI--------D 378 (562)
T ss_pred C-------------------CCeE---EE----CCceEEEEEC---C--EEEEEECHHHHHh----CCCCC--------C
Confidence 0 0111 00 1233333332 2 2234588877632 11111 1
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
++..+|.+++.++. |.+++|.++++|+++++++++|+.|++
T Consensus 379 ~~~~~g~~~~~~~~---------------------------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~ 419 (562)
T TIGR01511 379 GKAEQGSTSVLVAV---------------------------------------NGELAGVFALEDQLRPEAKEVIQALKR 419 (562)
T ss_pred hhhhCCCEEEEEEE---------------------------------------CCEEEEEEEecccccHHHHHHHHHHHH
Confidence 23468989888763 789999999999999999999999999
Q ss_pred cCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCCCC
Q 003670 325 AGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGSS 404 (804)
Q Consensus 325 aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (804)
.|++++|+|||+..++..+++++|+-
T Consensus 420 ~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------------------------------ 445 (562)
T TIGR01511 420 RGIEPVMLTGDNRKTAKAVAKELGIN------------------------------------------------------ 445 (562)
T ss_pred cCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------------------------------
Confidence 99999999999999999999999971
Q ss_pred CCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCccee
Q 003670 405 EAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIG 484 (804)
Q Consensus 405 ~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~ 484 (804)
+++++.|++|..+++.+++ .++.|+|+|||.||++|++.||+||+
T Consensus 446 ----------------------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia 490 (562)
T TIGR01511 446 ----------------------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIA 490 (562)
T ss_pred ----------------------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEE
Confidence 4566779999999999998 78999999999999999999999999
Q ss_pred ecCcchhhhhcccchhcch--HhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHH
Q 003670 485 ISGVEGMQAVMSSDIAIAQ--FRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVF 541 (804)
Q Consensus 485 i~g~~~~~a~~aaD~~i~~--f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 541 (804)
++. ....++.+||+++.+ +..+..+ +..||..++++++.+.+.+..|++.+.+.+
T Consensus 491 ~g~-g~~~a~~~Advvl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 491 IGA-GTDVAIEAADVVLMRNDLNDVATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred eCC-cCHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 953 334478899999974 5557666 899999999999999999999998665444
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.97 E-value=3.8e-31 Score=304.60 Aligned_cols=279 Identities=20% Similarity=0.244 Sum_probs=213.7
Q ss_pred CCCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCccc
Q 003670 4 EEADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEED 83 (804)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (804)
+.+++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 226 ~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~----------------------------------- 270 (536)
T TIGR01512 226 AAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA----------------------------------- 270 (536)
T ss_pred HHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-----------------------------------
Confidence 346889999999999999999999999999999999999876310
Q ss_pred cccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHHHHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 84 LTESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFRLLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
+++...+.+. . ...||.+.|+++++++.+ .+.
T Consensus 271 ---------------------------------~~l~~a~~~e-----~---------~~~hp~~~Ai~~~~~~~~-~~~ 302 (536)
T TIGR01512 271 ---------------------------------EVLRLAAAAE-----Q---------ASSHPLARAIVDYARKRE-NVE 302 (536)
T ss_pred ---------------------------------HHHHHHHHHh-----c---------cCCCcHHHHHHHHHHhcC-CCc
Confidence 2223322221 1 136999999999998754 000
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHHH
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHV 243 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l 243 (804)
..+ .+| .+.+...+ +|.. +..|+++.+.+. + .
T Consensus 303 ----------------------~~~---~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~----~--~-------- 334 (536)
T TIGR01512 303 ----------------------SVE---EVP----GEGVRAVV---DGGE--VRIGNPRSLEAA----V--G-------- 334 (536)
T ss_pred ----------------------ceE---Eec----CCeEEEEE---CCeE--EEEcCHHHHhhc----C--C--------
Confidence 000 011 12222222 2322 234877554321 1 0
Q ss_pred HHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHH
Q 003670 244 NKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLA 323 (804)
Q Consensus 244 ~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~ 323 (804)
..+..+|.+++.++ .|..++|.+.++|+++++++++|+.|+
T Consensus 335 ~~~~~~~~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~ 375 (536)
T TIGR01512 335 ARPESAGKTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELK 375 (536)
T ss_pred cchhhCCCeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHH
Confidence 14566787877665 378999999999999999999999999
Q ss_pred hcCC-eEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCC
Q 003670 324 QAGI-KIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGG 402 (804)
Q Consensus 324 ~aGI-kv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (804)
++|+ +++|+|||+..++..+++++|+..
T Consensus 376 ~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~--------------------------------------------------- 404 (536)
T TIGR01512 376 ALGIEKVVMLTGDRRAVAERVARELGIDE--------------------------------------------------- 404 (536)
T ss_pred HcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------------------------------
Confidence 9999 999999999999999999999721
Q ss_pred CCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcc
Q 003670 403 SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIG 482 (804)
Q Consensus 403 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvG 482 (804)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+|
T Consensus 405 ------------------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vg 447 (536)
T TIGR01512 405 ------------------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVG 447 (536)
T ss_pred ------------------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEE
Confidence 5677789999999999998 789999999999999999999999
Q ss_pred eeecCcchhhhhcccchhcc--hHhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHH
Q 003670 483 IGISGVEGMQAVMSSDIAIA--QFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGLSVF 541 (804)
Q Consensus 483 I~i~g~~~~~a~~aaD~~i~--~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~ 541 (804)
|+++......++.+||+++. ++..+..+ +..||..++++++.+.|.+..|++.+.+.+
T Consensus 448 ia~g~~~~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 507 (536)
T TIGR01512 448 IAMGASGSDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLAL 507 (536)
T ss_pred EEeCCCccHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99963334457889999994 56667776 899999999999999999999987655544
No 33
>PRK10671 copA copper exporting ATPase; Provisional
Probab=99.97 E-value=1.3e-30 Score=315.57 Aligned_cols=292 Identities=22% Similarity=0.254 Sum_probs=224.3
Q ss_pred CCCCCceecCCCchhhccCceEEEcCCCcccccceEEEEEEEEcCeecCCCchHHHHHhhhcCCCCccccccCCCCcccc
Q 003670 5 EADTPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMNRKKGSPLIDVVNGLNTEEDL 84 (804)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (804)
.+++|+++|+.+.+|.||+++++|||||||||+|+|++.++...+.. +
T Consensus 498 ~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~--------------------------- 545 (834)
T PRK10671 498 AAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-----D--------------------------- 545 (834)
T ss_pred HHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-----C---------------------------
Confidence 46899999999999999999999999999999999999876532100 0
Q ss_pred ccCCCCCCCcCcCchhhhccCCCCCCChHHHHHHHH-HHhhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEE
Q 003670 85 TESRPSVKGFNFKDERIANGNWVNEPNSDVIQKFFR-LLAVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFY 163 (804)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~la~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~ 163 (804)
..+++. +.+++.. +.||.+.|+++++...+..
T Consensus 546 ------------------------------~~~~l~~a~~~e~~---------------s~hp~a~Ai~~~~~~~~~~-- 578 (834)
T PRK10671 546 ------------------------------EAQALRLAAALEQG---------------SSHPLARAILDKAGDMTLP-- 578 (834)
T ss_pred ------------------------------HHHHHHHHHHHhCC---------------CCCHHHHHHHHHHhhCCCC--
Confidence 012222 2333311 3699999999987642210
Q ss_pred eecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEcCchhHhHHHhhccCcccHHHHHHHH
Q 003670 164 QRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCKGADSVMFDRLAKNGRDFEVETRDHV 243 (804)
Q Consensus 164 ~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l 243 (804)
. ...++.+. .+.+...+ +|. .+.+|+++.+.+. + ...+.+.+.+
T Consensus 579 ~-------------------~~~~~~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~~----~-~~~~~~~~~~ 622 (834)
T PRK10671 579 Q-------------------VNGFRTLR-------GLGVSGEA---EGH--ALLLGNQALLNEQ----Q-VDTKALEAEI 622 (834)
T ss_pred C-------------------cccceEec-------ceEEEEEE---CCE--EEEEeCHHHHHHc----C-CChHHHHHHH
Confidence 0 01111000 11222221 343 3455998877431 1 1234566778
Q ss_pred HHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHH
Q 003670 244 NKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLA 323 (804)
Q Consensus 244 ~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~ 323 (804)
+++..+|.+++.+|+ |..++|.++++|++|++++++|+.|+
T Consensus 623 ~~~~~~g~~~v~va~---------------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~ 663 (834)
T PRK10671 623 TAQASQGATPVLLAV---------------------------------------DGKAAALLAIRDPLRSDSVAALQRLH 663 (834)
T ss_pred HHHHhCCCeEEEEEE---------------------------------------CCEEEEEEEccCcchhhHHHHHHHHH
Confidence 888999999999985 56789999999999999999999999
Q ss_pred hcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccccccCCCC
Q 003670 324 QAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQLSASGGS 403 (804)
Q Consensus 324 ~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (804)
+.|++++|+|||+..+|..+++++|+..
T Consensus 664 ~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------------------------------- 691 (834)
T PRK10671 664 KAGYRLVMLTGDNPTTANAIAKEAGIDE---------------------------------------------------- 691 (834)
T ss_pred HCCCeEEEEcCCCHHHHHHHHHHcCCCE----------------------------------------------------
Confidence 9999999999999999999999999731
Q ss_pred CCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcce
Q 003670 404 SEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGI 483 (804)
Q Consensus 404 ~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI 483 (804)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+||
T Consensus 692 -----------------------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgi 735 (834)
T PRK10671 692 -----------------------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGI 735 (834)
T ss_pred -----------------------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeE
Confidence 7778889999999999998 7889999999999999999999999
Q ss_pred eecCcchhhhhcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHH
Q 003670 484 GISGVEGMQAVMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSV 540 (804)
Q Consensus 484 ~i~g~~~~~a~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 540 (804)
+|++ ....++.+||+++.+.+. +..+ +..||..+.++++.+.+.+.+|++.+.+.
T Consensus 736 a~g~-g~~~a~~~ad~vl~~~~~~~i~~~-i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a 792 (834)
T PRK10671 736 AMGG-GSDVAIETAAITLMRHSLMGVADA-LAISRATLRNMKQNLLGAFIYNSLGIPIA 792 (834)
T ss_pred EecC-CCHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9954 455588999999987443 6666 88999999999999999999998876544
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.87 E-value=1.8e-22 Score=206.18 Aligned_cols=97 Identities=30% Similarity=0.507 Sum_probs=90.3
Q ss_pred cceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHH
Q 003670 298 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSE 377 (804)
Q Consensus 298 dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~ 377 (804)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999821
Q ss_pred HHHHhhhhHHHHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcC--ChhhH--HHHHH
Q 003670 378 ITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRS--SPRQK--ALVTR 453 (804)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~--sP~qK--~~iv~ 453 (804)
..+++++ +|++| ..+++
T Consensus 169 -----------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 169 -----------------------------------------------------------SIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp -----------------------------------------------------------EEEEESHETTTHHHHHHHHHH
T ss_pred -----------------------------------------------------------ccccccccccccchhHHHHHH
Confidence 2389999 99999 99999
Q ss_pred HHHccCCCeEEEecCCcCChhhhhhcC
Q 003670 454 LVKSGTGKTTLAIGDGANDVGMLQEAD 480 (804)
Q Consensus 454 ~lk~~~~~~vlaiGDG~ND~~ml~~Ad 480 (804)
.++. .+..|+|+|||.||++|+++||
T Consensus 190 ~l~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhc-CCCEEEEEccCHHHHHHHHhCc
Confidence 9986 5569999999999999999997
No 35
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.53 E-value=1.3e-14 Score=125.73 Aligned_cols=90 Identities=36% Similarity=0.582 Sum_probs=71.1
Q ss_pred hhccceeeeecCCCCceEEecCCccHHHHHHHHHHcCcEEEeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceE
Q 003670 123 AVCHTAIPEVDENTGKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRM 202 (804)
Q Consensus 123 a~C~~~~~~~~~~~~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 202 (804)
|+||++....++..+..+ ..++|+|.||+.++.+.|..+.. ...+..|++++.+||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 689999886655433322 45789999999999999754331 1235789999999999999999
Q ss_pred EEEEEcCCCeEEEEEcCchhHhHHHhhc
Q 003670 203 SVIIRDEEGKILLLCKGADSVMFDRLAK 230 (804)
Q Consensus 203 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 230 (804)
+||++ .++.+.+|+||||+.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3446788999999999999974
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.51 E-value=1.1e-13 Score=121.57 Aligned_cols=126 Identities=25% Similarity=0.399 Sum_probs=108.2
Q ss_pred ceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHH
Q 003670 299 LVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEI 378 (804)
Q Consensus 299 l~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~ 378 (804)
+...+.++---++-++|+++|+.|++. ++|+++|||.+-+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 567788888899999999999999999 99999999999999999988886211
Q ss_pred HHHhhhhHHHHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHcc
Q 003670 379 TKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG 458 (804)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~ 458 (804)
.+++...|+.|+.+++.+++
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk- 91 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKK- 91 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcC-
Confidence 18888889999999999998
Q ss_pred CCCeEEEecCCcCChhhhhhcCcceeecCcchh--hhhcccchhcchHhhHHHHH
Q 003670 459 TGKTTLAIGDGANDVGMLQEADIGIGISGVEGM--QAVMSSDIAIAQFRYLERLL 511 (804)
Q Consensus 459 ~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~--~a~~aaD~~i~~f~~l~~ll 511 (804)
+++.|.|+|||+||+.||++||+||..-++++. .+..+||+++.+-+.+..++
T Consensus 92 ~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 92 RYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 899999999999999999999999965444443 24589999998877766654
No 37
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.26 E-value=3.5e-11 Score=119.52 Aligned_cols=173 Identities=13% Similarity=0.105 Sum_probs=126.7
Q ss_pred cchHHHHHHHHHHHhhhhHHHHhccccCCChhhhhccchhhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 003670 554 AYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNVLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQ 633 (804)
Q Consensus 554 ~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 633 (804)
++++.|++|.|++.+.+|++++|.++ ++++.+.+.|+ .+++++++.+.+...+..|+++++++++.++......
T Consensus 3 Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 3 PLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 58899999999999999999999864 56677777776 6778899999999999999999999988776654421
Q ss_pred ccCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhh-c------chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHH
Q 003670 634 AFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAIS-Y------FTLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKV 706 (804)
Q Consensus 634 ~~~~~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~~-~------~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~ 706 (804)
.....+...+....+|++|+++++.+.+....... + ..++.|..++.++++.++++++..++|. ++.
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-~~~----- 150 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-LNR----- 150 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT-HHH-----
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchh-hHh-----
Confidence 11111111124568899999999988777654333 1 2355788999999999999999999984 233
Q ss_pred HHHHHccChHHHHHHHHHHHHHHHHHHHHHHH
Q 003670 707 FIEALAPAPLFWLVTLFVVISTLIPYFAYSAI 738 (804)
Q Consensus 707 ~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i 738 (804)
+|+....++..|+.+++.+++.++..++.|++
T Consensus 151 ~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 56677889999999999999999999999875
No 38
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.15 E-value=7.2e-11 Score=125.18 Aligned_cols=198 Identities=14% Similarity=0.097 Sum_probs=109.9
Q ss_pred cceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc-------ccCCCeEEEE--eccchhhhH
Q 003670 298 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL-------LRPGMQQIII--NLETPEILA 368 (804)
Q Consensus 298 dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl-------~~~~~~~i~i--~~~~~~~~~ 368 (804)
|.||+.- ..++.+.+.++|++|+++|++++++||+....+..+..++++ +..|+..+.- +++......
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 5566642 235888999999999999999999999999999999999986 3334444432 222222233
Q ss_pred hhhhchhHHHHHHhhhhHHHHhhhccccc-------------------cc---C----CCCCCCe-EEEEechhhhHhhh
Q 003670 369 LEKTGAKSEITKASKESVLHQINEGKNQL-------------------SA---S----GGSSEAF-ALIIDGKSLTYALE 421 (804)
Q Consensus 369 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~---~----~~~~~~~-~lvi~G~~l~~~l~ 421 (804)
++.+.....++..........+......+ .. . ....... .++++.... +
T Consensus 88 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~---~- 163 (270)
T PRK10513 88 LSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEI---L- 163 (270)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHH---H-
Confidence 33333332222221111100000000000 00 0 0000001 111221110 0
Q ss_pred HHHHHHHHHHHh-----cCCceEEEcCChh--hHHHHHHHHHccC---CCeEEEecCCcCChhhhhhcCcceeecCcchh
Q 003670 422 DDIKNKFLELAI-----GCASVICCRSSPR--QKALVTRLVKSGT---GKTTLAIGDGANDVGMLQEADIGIGISGVEGM 491 (804)
Q Consensus 422 ~~~~~~~~~~~~-----~~~~vi~~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~ 491 (804)
+.+...+..... .....-+..+.|. .|+..++.+.++. .+.|++||||.||++||+.|++||+|++. ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA-~~ 242 (270)
T PRK10513 164 DAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNA-IP 242 (270)
T ss_pred HHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCc-cH
Confidence 111112221110 0001123455555 5999999887753 36799999999999999999999999654 45
Q ss_pred hhhcccchhcch
Q 003670 492 QAVMSSDIAIAQ 503 (804)
Q Consensus 492 ~a~~aaD~~i~~ 503 (804)
.++.+||++..+
T Consensus 243 ~vK~~A~~vt~~ 254 (270)
T PRK10513 243 SVKEVAQFVTKS 254 (270)
T ss_pred HHHHhcCeeccC
Confidence 589999998765
No 39
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.08 E-value=1.6e-10 Score=122.64 Aligned_cols=197 Identities=17% Similarity=0.129 Sum_probs=108.4
Q ss_pred cceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc----ccCCCeEEE-EeccchhhhHhhhh
Q 003670 298 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL----LRPGMQQII-INLETPEILALEKT 372 (804)
Q Consensus 298 dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl----~~~~~~~i~-i~~~~~~~~~l~~~ 372 (804)
|.||+.- ...+.+.+.++|++|+++|++++++||+....+..+..++++ +..|+..+. .+++......++.+
T Consensus 10 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 5555531 235889999999999999999999999999999999999886 223444443 22222222333333
Q ss_pred chhHHHHHHhhhhHHHHhhhcccc-------------------ccc---C-CCCCCCeEEEEech--hhhHhhhHHHHHH
Q 003670 373 GAKSEITKASKESVLHQINEGKNQ-------------------LSA---S-GGSSEAFALIIDGK--SLTYALEDDIKNK 427 (804)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~---~-~~~~~~~~lvi~G~--~l~~~l~~~~~~~ 427 (804)
...+.++.....+....+...... ... . ........+.+-+. .+. .+...+.+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~-~~~~~l~~~ 165 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLT-RLQIQLNEA 165 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHH-HHHHHHHHH
Confidence 333333322211110000000000 000 0 00001111112111 111 111112222
Q ss_pred HHH-HHhcCCceEEEcCChh--hHHHHHHHHHccCC---CeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccch
Q 003670 428 FLE-LAIGCASVICCRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDI 499 (804)
Q Consensus 428 ~~~-~~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~ 499 (804)
+.. +.......-+..++|. .|+..++.+.++.| ..|++||||.||++||+.|+.||+|++ ....++.+||+
T Consensus 166 ~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~N-a~~~vK~~A~~ 242 (272)
T PRK15126 166 LGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGN-AMPQLRAELPH 242 (272)
T ss_pred hcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccC-ChHHHHHhCCC
Confidence 110 0000011124566666 49999999987643 689999999999999999999999965 44558899986
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.04 E-value=3.7e-10 Score=119.30 Aligned_cols=194 Identities=17% Similarity=0.205 Sum_probs=111.5
Q ss_pred EEEeeecc-ccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc----cCCCeEEEEeccchhhhHhhhhchhHH
Q 003670 303 GATAVEDK-LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL----RPGMQQIIINLETPEILALEKTGAKSE 377 (804)
Q Consensus 303 G~~~i~D~-lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~----~~~~~~i~i~~~~~~~~~l~~~~~~~~ 377 (804)
|++.-.|. +.+.+.++|+++++.|+++.++||++...+..+..++++- ..|+..+.-.++......++.+.....
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33333444 8999999999999999999999999999999999999873 344444444444444444444444444
Q ss_pred HHHHhhh-hHHHHhhhccccc-------ccC--CC------------CCCC---eEEEEechhhhHhhhHHHHHHHHHHH
Q 003670 378 ITKASKE-SVLHQINEGKNQL-------SAS--GG------------SSEA---FALIIDGKSLTYALEDDIKNKFLELA 432 (804)
Q Consensus 378 ~~~~~~~-~~~~~~~~~~~~~-------~~~--~~------------~~~~---~~lvi~G~~l~~~l~~~~~~~~~~~~ 432 (804)
+...... ............. ... .. .... ..+..+...+..+ ...+.+.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~-- 168 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEEL-VEALRKRFPD-- 168 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHH-HHHHhhhccc--
Confidence 4433221 1100000000000 000 00 0000 0111111111111 1112222211
Q ss_pred hcCCceEE-------EcCChh--hHHHHHHHHHccCC---CeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccchh
Q 003670 433 IGCASVIC-------CRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIA 500 (804)
Q Consensus 433 ~~~~~vi~-------~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~ 500 (804)
....+ ..+.|+ .|+..++.+.++.+ ..|+++||+.||++||+.|+.||+|++. ...++..||++
T Consensus 169 ---~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~v 244 (264)
T COG0561 169 ---LGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYV 244 (264)
T ss_pred ---cceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcc
Confidence 12233 333444 59999998887644 4599999999999999999999999766 55699999966
Q ss_pred cch
Q 003670 501 IAQ 503 (804)
Q Consensus 501 i~~ 503 (804)
...
T Consensus 245 t~~ 247 (264)
T COG0561 245 TTS 247 (264)
T ss_pred cCC
Confidence 443
No 41
>PRK10976 putative hydrolase; Provisional
Probab=99.03 E-value=3.6e-10 Score=119.55 Aligned_cols=200 Identities=16% Similarity=0.166 Sum_probs=109.7
Q ss_pred cceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc----ccCCCeEEEE-eccchhhhHhhhh
Q 003670 298 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL----LRPGMQQIII-NLETPEILALEKT 372 (804)
Q Consensus 298 dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl----~~~~~~~i~i-~~~~~~~~~l~~~ 372 (804)
|.||+.- ..++.+.+.++|++|+++|++++++||+....+..+..++++ +..|+..+.- +++......++.+
T Consensus 10 DGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~ 86 (266)
T PRK10976 10 DGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRD 86 (266)
T ss_pred CCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHH
Confidence 5555531 234888999999999999999999999999999999999886 2334444432 2333333444444
Q ss_pred chhHHHHHHhhh-hHHHHhhhccccccc----------------------CC-CCCCCeE-EEEech--hhhHhhhHHHH
Q 003670 373 GAKSEITKASKE-SVLHQINEGKNQLSA----------------------SG-GSSEAFA-LIIDGK--SLTYALEDDIK 425 (804)
Q Consensus 373 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------------------~~-~~~~~~~-lvi~G~--~l~~~l~~~~~ 425 (804)
...+.++...+. .....+......+.. .. ....... ++..+. .+. .+.+.+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~-~~~~~l~ 165 (266)
T PRK10976 87 IASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLL-PLEQAIN 165 (266)
T ss_pred HHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHH-HHHHHHH
Confidence 444444433211 110000000000000 00 0000011 111111 111 0111121
Q ss_pred HHHHH-HHhcCCceEEEcCChh--hHHHHHHHHHccCC---CeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccc-
Q 003670 426 NKFLE-LAIGCASVICCRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSD- 498 (804)
Q Consensus 426 ~~~~~-~~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD- 498 (804)
+.+.. +.......-+..+.|. .|+..++.+.++.| +.|++||||.||++||+.|+.||+|++.. ..++..||
T Consensus 166 ~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~-~~vK~~A~~ 244 (266)
T PRK10976 166 ARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAH-QRLKDLLPE 244 (266)
T ss_pred HHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCc-HHHHHhCCC
Confidence 11110 0000011124466665 59999998877643 67999999999999999999999996554 44888887
Q ss_pred -hhcc
Q 003670 499 -IAIA 502 (804)
Q Consensus 499 -~~i~ 502 (804)
++..
T Consensus 245 ~~v~~ 249 (266)
T PRK10976 245 LEVIG 249 (266)
T ss_pred Ceecc
Confidence 5554
No 42
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.96 E-value=4.3e-10 Score=117.40 Aligned_cols=194 Identities=14% Similarity=0.168 Sum_probs=111.7
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc----cCCCeEE-EEeccchhhhHhhhhchhHHHHHHhh
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL----RPGMQQI-IINLETPEILALEKTGAKSEITKASK 383 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~----~~~~~~i-~i~~~~~~~~~l~~~~~~~~~~~~~~ 383 (804)
.++.+.+.++|++|+++|++++++||+....+..+..++++- ..++..+ ..+++......++.+...+.+.....
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 447789999999999999999999999999999999998863 2333333 11222222233444444444444444
Q ss_pred hhHHHHhhhcccccccCC-------------------------CCCCCeEEEEec-hhhhHhhhHHHHHHHHHHH-hcCC
Q 003670 384 ESVLHQINEGKNQLSASG-------------------------GSSEAFALIIDG-KSLTYALEDDIKNKFLELA-IGCA 436 (804)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~lvi~G-~~l~~~l~~~~~~~~~~~~-~~~~ 436 (804)
..+...+......+.... .......+.+.. ..-...+.+.+.+.+.... ....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 332211111111111111 000111111221 1111122223333333211 1111
Q ss_pred ceEEEcCChh--hHHHHHHHHHcc---CCCeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccchhcch
Q 003670 437 SVICCRSSPR--QKALVTRLVKSG---TGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQ 503 (804)
Q Consensus 437 ~vi~~r~sP~--qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~ 503 (804)
..-+..++|. .|+..++.+.++ ..+.++++||+.||.+|++.||.||+|.+... ..+..||++...
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~-~~k~~a~~i~~~ 244 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATP-ELKKAADYITPS 244 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-H-HHHHHSSEEESS
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCH-HHHHhCCEEecC
Confidence 1123345554 599999988865 34789999999999999999999999966554 488999998765
No 43
>PLN02887 hydrolase family protein
Probab=98.93 E-value=9.7e-10 Score=126.11 Aligned_cols=191 Identities=15% Similarity=0.143 Sum_probs=105.2
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCccc-------------CCCeEEE-EeccchhhhHhhhhchh
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR-------------PGMQQII-INLETPEILALEKTGAK 375 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~-------------~~~~~i~-i~~~~~~~~~l~~~~~~ 375 (804)
.+-+.+.++|++|+++|++++++||+....+..+..++++.. .|+..+. .+++......++.+...
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~L~~e~v~ 404 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQGREIYRSNLDQEVCR 404 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCCcEEEEEeCCHHHHH
Confidence 488999999999999999999999999999999999887532 1233332 12222222333444444
Q ss_pred HHHHHHhhhhHHHHhhhcccccc---------------cCC-----------CCCCCeEEEEechhhhHhhhHHHHHHHH
Q 003670 376 SEITKASKESVLHQINEGKNQLS---------------ASG-----------GSSEAFALIIDGKSLTYALEDDIKNKFL 429 (804)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-----------~~~~~~~lvi~G~~l~~~l~~~~~~~~~ 429 (804)
+.+....+.++...+......+. ... .......+.+-+..-. ..+.+...+.
T Consensus 405 eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~--~~~~l~~~l~ 482 (580)
T PLN02887 405 EACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEG--VSSVLRPYWS 482 (580)
T ss_pred HHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcChHH--HHHHHHHHHH
Confidence 44433322111100000000000 000 0000111111111100 0001111221
Q ss_pred HHHh-cCC----ceEEEcCChh--hHHHHHHHHHccCC---CeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccch
Q 003670 430 ELAI-GCA----SVICCRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDI 499 (804)
Q Consensus 430 ~~~~-~~~----~vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~ 499 (804)
.... ... ..-+.++.|. .|+..++.+.++.| +.|++||||.||++||+.|++||||.+. ...++.+||+
T Consensus 483 ~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA-~eeVK~~Ad~ 561 (580)
T PLN02887 483 EATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNG-AEKTKAVADV 561 (580)
T ss_pred HHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCC-CHHHHHhCCE
Confidence 1110 000 0113455555 59999998887643 6799999999999999999999999654 4458999999
Q ss_pred hcch
Q 003670 500 AIAQ 503 (804)
Q Consensus 500 ~i~~ 503 (804)
+..+
T Consensus 562 VT~s 565 (580)
T PLN02887 562 IGVS 565 (580)
T ss_pred EeCC
Confidence 8754
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.90 E-value=3.8e-09 Score=109.15 Aligned_cols=183 Identities=15% Similarity=0.157 Sum_probs=100.8
Q ss_pred ecc-ccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc----cCCCeEEEEe--ccchhhhHhhhhchhHHHHH
Q 003670 308 EDK-LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL----RPGMQQIIIN--LETPEILALEKTGAKSEITK 380 (804)
Q Consensus 308 ~D~-lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~----~~~~~~i~i~--~~~~~~~~l~~~~~~~~~~~ 380 (804)
.|+ +.+.+.++|++|+++|++++++||+....+..+.+.+++- ..|+..+... ++......++ ...+.+..
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~--~~~~~~~~ 94 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIE--ECEKAYSE 94 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchH--HHHHHHHH
Confidence 344 7889999999999999999999999999999999998862 2333333322 1111111111 11111111
Q ss_pred HhhhhHHHHhhhcccccccCCCCCCCeEE-EEechhhhHhhhHHHHHHHHHHH---hcCCceEEEcCChhh--HHHHHHH
Q 003670 381 ASKESVLHQINEGKNQLSASGGSSEAFAL-IIDGKSLTYALEDDIKNKFLELA---IGCASVICCRSSPRQ--KALVTRL 454 (804)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-vi~G~~l~~~l~~~~~~~~~~~~---~~~~~vi~~r~sP~q--K~~iv~~ 454 (804)
..+ ........+...........+ +....... ...+.+.... ....+..+.+..|.. |+..++.
T Consensus 95 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~ 164 (230)
T PRK01158 95 LKK-----RFPEASTSLTKLDPDYRKTEVALRRTVPVE-----EVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKK 164 (230)
T ss_pred HHH-----hccccceeeecCCcccccceeeecccccHH-----HHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHH
Confidence 110 000000001100000001111 11221111 1122221111 001111234555554 8888888
Q ss_pred HHcc---CCCeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccchhcch
Q 003670 455 VKSG---TGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQ 503 (804)
Q Consensus 455 lk~~---~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~ 503 (804)
+.++ ....++++|||.||++|++.|++||+|.+.. ..++.+||++..+
T Consensus 165 l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~-~~vk~~a~~v~~~ 215 (230)
T PRK01158 165 LAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANAD-EELKEAADYVTEK 215 (230)
T ss_pred HHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCcc-HHHHHhcceEecC
Confidence 8765 3367999999999999999999999996544 4588899998764
No 45
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.88 E-value=7.9e-09 Score=109.63 Aligned_cols=191 Identities=15% Similarity=0.161 Sum_probs=105.0
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc----ccCCCeEEEE--eccchhhhHhhhhchhHHHHHHhh
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL----LRPGMQQIII--NLETPEILALEKTGAKSEITKASK 383 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl----~~~~~~~i~i--~~~~~~~~~l~~~~~~~~~~~~~~ 383 (804)
++.+.+.++|++++++|++++++||+....+..+.+++++ +..|+..+.- +++......++.+...+.++...+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~~~~~~i~~~~~~ 99 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPVQQALQVIEMLDE 99 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCHHHHHHHHHHHHh
Confidence 4888999999999999999999999999999999999875 3334444432 222223334444444444444332
Q ss_pred hhHHHHhhhccc------------------ccccC--------C-------CCCCCeEEEEechhhhHhhhHHHHHHHHH
Q 003670 384 ESVLHQINEGKN------------------QLSAS--------G-------GSSEAFALIIDGKSLTYALEDDIKNKFLE 430 (804)
Q Consensus 384 ~~~~~~~~~~~~------------------~~~~~--------~-------~~~~~~~lvi~G~~l~~~l~~~~~~~~~~ 430 (804)
.+....+..... ..... . .......+......... + +.+.+.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~~~~ 177 (272)
T PRK10530 100 HQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQ-L-QHFAKHVEH 177 (272)
T ss_pred CCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHH-H-HHHHHHHhh
Confidence 221100000000 00000 0 00011122222211110 0 011111111
Q ss_pred HHh-cC--CceEEEcCChh--hHHHHHHHHHccCC---CeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccchhcc
Q 003670 431 LAI-GC--ASVICCRSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIA 502 (804)
Q Consensus 431 ~~~-~~--~~vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~ 502 (804)
... .. ...-+....|. .|+..++.+.++.+ +.|++|||+.||++|++.|++||+|++. ...++..||++..
T Consensus 178 ~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna-~~~lk~~Ad~v~~ 256 (272)
T PRK10530 178 ELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNA-DDAVKARADLVIG 256 (272)
T ss_pred hcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCc-hHHHHHhCCEEEe
Confidence 100 00 00012233333 58888887765433 6799999999999999999999999654 4557889999876
Q ss_pred h
Q 003670 503 Q 503 (804)
Q Consensus 503 ~ 503 (804)
+
T Consensus 257 ~ 257 (272)
T PRK10530 257 D 257 (272)
T ss_pred c
Confidence 5
No 46
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.80 E-value=1.3e-08 Score=104.71 Aligned_cols=182 Identities=14% Similarity=0.142 Sum_probs=96.9
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc----ccCCCeEEEEeccc--hhhhHhhhhchhHHHHHHhh
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL----LRPGMQQIIINLET--PEILALEKTGAKSEITKASK 383 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl----~~~~~~~i~i~~~~--~~~~~l~~~~~~~~~~~~~~ 383 (804)
.+.+.+.++|++|+++|++++++||++...+..+.+.+++ +..|+..+...... .....+........+...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAK-- 92 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhc--
Confidence 4778899999999999999999999999999999999884 22233322222110 000001100000000000
Q ss_pred hhHHHHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChh--hHHHHHHHHHccC--
Q 003670 384 ESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPR--QKALVTRLVKSGT-- 459 (804)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~--qK~~iv~~lk~~~-- 459 (804)
............ .......+.... ....+ . .+.+.+......+.+..+..+.|. .|+..++.+.++.
T Consensus 93 ---~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i 163 (225)
T TIGR01482 93 ---TFPFSRLKVQYP---RRASLVKMRYGI-DVDTV-R-EIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGI 163 (225)
T ss_pred ---ccchhhhccccc---cccceEEEeecC-CHHHH-H-HHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCC
Confidence 000000000000 000111222211 11110 0 111111100000011124454553 6888888876643
Q ss_pred -CCeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccchhcch
Q 003670 460 -GKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQ 503 (804)
Q Consensus 460 -~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~ 503 (804)
...|++|||+.||++|++.|++||+|.+. ...++..||++..+
T Consensus 164 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na-~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 164 KPGETLVCGDSENDIDLFEVPGFGVAVANA-QPELKEWADYVTES 207 (225)
T ss_pred CHHHEEEECCCHhhHHHHHhcCceEEcCCh-hHHHHHhcCeecCC
Confidence 36799999999999999999999999654 34588899998754
No 47
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.77 E-value=1.2e-08 Score=107.34 Aligned_cols=199 Identities=16% Similarity=0.160 Sum_probs=111.9
Q ss_pred cceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc----ccCCCeEEEEe-ccchhhhHhhhh
Q 003670 298 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL----LRPGMQQIIIN-LETPEILALEKT 372 (804)
Q Consensus 298 dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl----~~~~~~~i~i~-~~~~~~~~l~~~ 372 (804)
|.||+.- ..++.+++.++|++|+++|++++++||+....+..+..++++ +..|+..+... ++......++.+
T Consensus 7 DGTLl~~---~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~ 83 (256)
T TIGR00099 7 DGTLLND---DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLD 83 (256)
T ss_pred CCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHH
Confidence 4555531 234888999999999999999999999999999999988875 33444444433 222333444444
Q ss_pred chhHHHHHHhhhhHHHHhhhcccccccCC-------------C------------CCCCeEEEEechhhhHhhhHHHHHH
Q 003670 373 GAKSEITKASKESVLHQINEGKNQLSASG-------------G------------SSEAFALIIDGKSLTYALEDDIKNK 427 (804)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~------------~~~~~~lvi~G~~l~~~l~~~~~~~ 427 (804)
...+.++...+......+......+.... . ......+.+.+..-. .+.+.+.
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 160 (256)
T TIGR00099 84 LVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPED---LDLLIEA 160 (256)
T ss_pred HHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHH---HHHHHHH
Confidence 44455544433221110000000000000 0 000011111111100 0112222
Q ss_pred HHH--HHhcC----CceEEEcCChh--hHHHHHHHHHccC---CCeEEEecCCcCChhhhhhcCcceeecCcchhhhhcc
Q 003670 428 FLE--LAIGC----ASVICCRSSPR--QKALVTRLVKSGT---GKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMS 496 (804)
Q Consensus 428 ~~~--~~~~~----~~vi~~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~a 496 (804)
+.. ..... ...-+..+.|. .|+..++.+.+.. ...++++||+.||++|++.|++|++|.+. ...++..
T Consensus 161 ~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na-~~~~k~~ 239 (256)
T TIGR00099 161 LNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA-DEELKAL 239 (256)
T ss_pred hhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCc-hHHHHHh
Confidence 211 00000 11123455555 5999999888753 36899999999999999999999999654 4457888
Q ss_pred cchhcch
Q 003670 497 SDIAIAQ 503 (804)
Q Consensus 497 aD~~i~~ 503 (804)
||++...
T Consensus 240 a~~~~~~ 246 (256)
T TIGR00099 240 ADYVTDS 246 (256)
T ss_pred CCEEecC
Confidence 9988764
No 48
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.77 E-value=5.8e-08 Score=98.16 Aligned_cols=122 Identities=23% Similarity=0.250 Sum_probs=89.0
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHH
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 388 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 388 (804)
.++.+++.+.++.++++|.+||++||-...-+..+|+.+|+...-...+.++..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 689999999999999999999999999999999999999985433333222210
Q ss_pred HhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCC---CeEEE
Q 003670 389 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTG---KTTLA 465 (804)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vla 465 (804)
+++|. ++.-.+..+.|...++.+.+..| +.+.|
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 11221 13333445778887766655434 46999
Q ss_pred ecCCcCChhhhhhcCcceeecCcchhhhhcccchhcc
Q 003670 466 IGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIA 502 (804)
Q Consensus 466 iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~ 502 (804)
+|||.||.|||+.||.+|++..... ....|+..+.
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~--l~~~a~~~~~ 200 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK--LRALADVRIW 200 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH--HHHHHHHhcC
Confidence 9999999999999999999966544 3344554443
No 49
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.76 E-value=1.7e-08 Score=103.07 Aligned_cols=186 Identities=16% Similarity=0.175 Sum_probs=102.2
Q ss_pred cceEeEEEeeec-cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc----cCCCeEEEEeccchhhhHhhhh
Q 003670 298 DLVLLGATAVED-KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL----RPGMQQIIINLETPEILALEKT 372 (804)
Q Consensus 298 dl~llG~~~i~D-~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~----~~~~~~i~i~~~~~~~~~l~~~ 372 (804)
|.||+. .| ++.+.+.++|++|+++|+++.++||+....+..+++.+++- ..|+..+....... .+...
T Consensus 9 DGTLl~----~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~---~~~~~ 81 (215)
T TIGR01487 9 DGTLTE----PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI---FLANM 81 (215)
T ss_pred CCCcCC----CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE---EEecc
Confidence 455553 33 48899999999999999999999999999999999988763 22333333322111 00000
Q ss_pred chhHHHHHHhhhhHHHHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHh-cCCceEEEcCCh--hhHH
Q 003670 373 GAKSEITKASKESVLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAI-GCASVICCRSSP--RQKA 449 (804)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~-~~~~vi~~r~sP--~qK~ 449 (804)
............ ..... .... ........+..++..... +...+..... ...+..+..++| -.|+
T Consensus 82 ~~~~~~~~~~~~---~~~~~---~~~~-~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~ei~~~~~~K~ 149 (215)
T TIGR01487 82 EEEWFLDEEKKK---RFPRD---RLSN-EYPRASLVIMREGKDVDE-----VREIIKERGLNLVDSGFAIHIMKKGVDKG 149 (215)
T ss_pred cchhhHHHhhhh---hhhhh---hccc-ccceeEEEEecCCccHHH-----HHHHHHhCCeEEEecCceEEEecCCCChH
Confidence 000000000000 00000 0000 000111122223322221 1111111100 000012334444 4799
Q ss_pred HHHHHHHccC---CCeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccchhcch
Q 003670 450 LVTRLVKSGT---GKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQ 503 (804)
Q Consensus 450 ~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~ 503 (804)
..++.+.+.. ...+++|||+.||++|++.|++|++|.+. ...++..||++...
T Consensus 150 ~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na-~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 150 VGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANA-DDQLKEIADYVTSN 205 (215)
T ss_pred HHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCc-cHHHHHhCCEEcCC
Confidence 8888887653 34699999999999999999999999654 45588899988753
No 50
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.75 E-value=2.7e-08 Score=105.46 Aligned_cols=198 Identities=14% Similarity=0.141 Sum_probs=104.5
Q ss_pred cceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc-----cCCCeEEEEeccc-------hh
Q 003670 298 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL-----RPGMQQIIINLET-------PE 365 (804)
Q Consensus 298 dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~-----~~~~~~i~i~~~~-------~~ 365 (804)
|.||+.- ...+-+.+.++|++|+++|++++++||+....+..+++++|+- ..|+..+...... ..
T Consensus 15 DGTLL~~---~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~ 91 (271)
T PRK03669 15 DGTLLDS---HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRI 91 (271)
T ss_pred ccCCcCC---CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEe
Confidence 5556531 2235567899999999999999999999999999999999862 2344444332110 01
Q ss_pred hhHhhhhchhHHHHHHhhh-hHHHHhhhc--------ccccc-----cCCCCCCCeEEEEechhhhHhhhHHHHHHHHHH
Q 003670 366 ILALEKTGAKSEITKASKE-SVLHQINEG--------KNQLS-----ASGGSSEAFALIIDGKSLTYALEDDIKNKFLEL 431 (804)
Q Consensus 366 ~~~l~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~-----~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~ 431 (804)
...++.+...+.++...+. ......... ..... ..........+.+.+... .+ ..+.+.+...
T Consensus 92 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~l~~~ 168 (271)
T PRK03669 92 ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDE--RM-AQFTARLAEL 168 (271)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHH--HH-HHHHHHHHHC
Confidence 1123333333333332221 110000000 00000 000000111222322110 00 1222222210
Q ss_pred HhcCC---ceEEEcCChh--hHHHHHHHHHccC------CCeEEEecCCcCChhhhhhcCcceeecCcch--hh---hhc
Q 003670 432 AIGCA---SVICCRSSPR--QKALVTRLVKSGT------GKTTLAIGDGANDVGMLQEADIGIGISGVEG--MQ---AVM 495 (804)
Q Consensus 432 ~~~~~---~vi~~r~sP~--qK~~iv~~lk~~~------~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~--~~---a~~ 495 (804)
.+. ..-+..+.|. .|+..++.+.++. ...|++||||.||++||+.|++||+|.+... .+ .+.
T Consensus 169 --~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~ 246 (271)
T PRK03669 169 --GLQFVQGARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDP 246 (271)
T ss_pred --CCEEEecCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccC
Confidence 111 1124466664 5998888887652 3579999999999999999999999964331 11 233
Q ss_pred ccchhcch
Q 003670 496 SSDIAIAQ 503 (804)
Q Consensus 496 aaD~~i~~ 503 (804)
.+|++...
T Consensus 247 ~~~~~~~~ 254 (271)
T PRK03669 247 ARVYRTQR 254 (271)
T ss_pred CceEeccC
Confidence 67776544
No 51
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.74 E-value=3.8e-08 Score=99.03 Aligned_cols=126 Identities=20% Similarity=0.144 Sum_probs=88.0
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 389 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 389 (804)
++.||+.+.|+.+++.| ++.|+||-....+..++.++|+-.--...+.++...
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 58999999999999975 999999999999999999999832111111111000
Q ss_pred hhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecCC
Q 003670 390 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDG 469 (804)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 469 (804)
.++|. .. ..+..|..+++.+++ .+..+.++|||
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs 153 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDS 153 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCC
Confidence 11111 11 236789999999976 67789999999
Q ss_pred cCChhhhhhcCcceeecCcchhhhhcccchhcch-HhhHHHH
Q 003670 470 ANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQ-FRYLERL 510 (804)
Q Consensus 470 ~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~-f~~l~~l 510 (804)
.||++|++.||+||++..++.. ...+=|+.... +..+...
T Consensus 154 ~nDl~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 154 YNDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHHHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 9999999999999999776653 23334554433 4444444
No 52
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.70 E-value=3.4e-08 Score=106.16 Aligned_cols=131 Identities=23% Similarity=0.206 Sum_probs=90.3
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 389 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 389 (804)
++.||+.+.|+.|++.|+++.++||.....+..+..++|+..--...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 48999999999999999999999999988888888888873211111111000
Q ss_pred hhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccC---CCeEEEe
Q 003670 390 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTLAI 466 (804)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~---~~~vlai 466 (804)
.++|.... .-+..+.|..+++.+.++. ...|++|
T Consensus 234 --------------------~ltg~v~g-----------------------~iv~~k~K~~~L~~la~~lgi~~~qtIaV 270 (322)
T PRK11133 234 --------------------KLTGNVLG-----------------------DIVDAQYKADTLTRLAQEYEIPLAQTVAI 270 (322)
T ss_pred --------------------EEEeEecC-----------------------ccCCcccHHHHHHHHHHHcCCChhhEEEE
Confidence 01111000 0023467888888776643 3689999
Q ss_pred cCCcCChhhhhhcCcceeecCcchhhhhcccchhcchHhhHHHHHHH
Q 003670 467 GDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLV 513 (804)
Q Consensus 467 GDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~~l~~lll~ 513 (804)
|||.||++|++.|++||++... +..+..||.++. +..|..+|..
T Consensus 271 GDg~NDl~m~~~AGlgiA~nAk--p~Vk~~Ad~~i~-~~~l~~~l~~ 314 (322)
T PRK11133 271 GDGANDLPMIKAAGLGIAYHAK--PKVNEQAQVTIR-HADLMGVLCI 314 (322)
T ss_pred ECCHHHHHHHHHCCCeEEeCCC--HHHHhhCCEEec-CcCHHHHHHH
Confidence 9999999999999999999333 447889999996 3445444433
No 53
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.69 E-value=6.8e-08 Score=101.48 Aligned_cols=187 Identities=12% Similarity=0.098 Sum_probs=99.2
Q ss_pred ccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc----ccCCCeEEEEeccch-------hhhHhhhhchhHHHH
Q 003670 311 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL----LRPGMQQIIINLETP-------EILALEKTGAKSEIT 379 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl----~~~~~~~i~i~~~~~-------~~~~l~~~~~~~~~~ 379 (804)
..+.+.++|++|+++|++++++||+....+..+.+++|+ +..|+..+....... ....++.+...+.++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 445689999999999999999999999999999999886 344555444322211 122233333333333
Q ss_pred HHhhh-hHHHHhhhcc--------ccc-----ccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhc-CCceEEEcCC
Q 003670 380 KASKE-SVLHQINEGK--------NQL-----SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIG-CASVICCRSS 444 (804)
Q Consensus 380 ~~~~~-~~~~~~~~~~--------~~~-----~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~-~~~vi~~r~s 444 (804)
....+ +......... ..+ ...........++. +..... .+...+...... ..+..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~s~~~~ei~ 171 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERRE----RFTEALVELGLEVTHGNRFYHVL 171 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHHH----HHHHHHHHcCCEEEeCCceEEEe
Confidence 22111 0000000000 000 00000011111222 211111 122222111000 0001233444
Q ss_pred hh--hHHHHHHHHHcc---C--CCeEEEecCCcCChhhhhhcCcceeecCcch--hhhhcc--c-chhcc
Q 003670 445 PR--QKALVTRLVKSG---T--GKTTLAIGDGANDVGMLQEADIGIGISGVEG--MQAVMS--S-DIAIA 502 (804)
Q Consensus 445 P~--qK~~iv~~lk~~---~--~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~--~~a~~a--a-D~~i~ 502 (804)
|. .|+..++.+.++ . ...++++||+.||++|++.|++||+|.+... ...+.. | +++..
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~ 241 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTP 241 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcC
Confidence 44 588777777655 3 5679999999999999999999999977542 235654 3 46543
No 54
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.49 E-value=2.6e-07 Score=94.78 Aligned_cols=52 Identities=10% Similarity=0.082 Sum_probs=42.3
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc----ccCCCeEEEE
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL----LRPGMQQIII 359 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl----~~~~~~~i~i 359 (804)
.+..-+++.++|++|+++|++++++||+....+..+..++|+ +..|+..+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~ 68 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFI 68 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEe
Confidence 455667799999999999999999999999999999999986 3344444443
No 55
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.46 E-value=4.9e-07 Score=92.59 Aligned_cols=123 Identities=21% Similarity=0.269 Sum_probs=84.9
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 389 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 389 (804)
++.+++++.|+.|+++|+++.++||.....+..+...+|+..--...+..+..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999998874211010111100
Q ss_pred hhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEc-CChhhHHHHHHHHHcc---CCCeEEE
Q 003670 390 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCR-SSPRQKALVTRLVKSG---TGKTTLA 465 (804)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r-~sP~qK~~iv~~lk~~---~~~~vla 465 (804)
.++|. +..+ ..+..|..+++.+.++ ....+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 00000 0111 1123355555554432 2356899
Q ss_pred ecCCcCChhhhhhcCcceeecCcchhhhhcccchhcchHh
Q 003670 466 IGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFR 505 (804)
Q Consensus 466 iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~ 505 (804)
|||+.+|+.|.+.|++++++.+.+. +..+||+++.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999976543 6678999988754
No 56
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.45 E-value=6e-07 Score=95.26 Aligned_cols=50 Identities=16% Similarity=0.089 Sum_probs=41.7
Q ss_pred cceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 298 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 298 dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
|.||+.- .+.+.+++.++|++|+++|++++++||+....+..+..++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 5555531 3356678999999999999999999999999999999999863
No 57
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.41 E-value=7.9e-07 Score=84.56 Aligned_cols=128 Identities=18% Similarity=0.286 Sum_probs=84.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCC--eEEEEeccchhhhHhhhhchhHHHHHHhhhhHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGM--QQIIINLETPEILALEKTGAKSEITKASKESVL 387 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~--~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 387 (804)
.+-+|+++....|++.|.++.++||--..-+..+|.++||-..+. +.+.++.....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~---------------------- 145 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY---------------------- 145 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----------------------
Confidence 367999999999999999999999999999999999999954221 11111111000
Q ss_pred HHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHcc-CCCeEEEe
Q 003670 388 HQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG-TGKTTLAI 466 (804)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~-~~~~vlai 466 (804)
..++... .-+...-|+.+++.+++. +.+.++||
T Consensus 146 -----------------------~gfd~~~-----------------------ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 146 -----------------------LGFDTNE-----------------------PTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred -----------------------cccccCC-----------------------ccccCCccHHHHHHHHhCCChheeEEe
Confidence 0000000 001123688999988875 55789999
Q ss_pred cCCcCChhhhhhcCcceeecCcchh-hhhcccchhcchHh
Q 003670 467 GDGANDVGMLQEADIGIGISGVEGM-QAVMSSDIAIAQFR 505 (804)
Q Consensus 467 GDG~ND~~ml~~AdvGI~i~g~~~~-~a~~aaD~~i~~f~ 505 (804)
|||+||.+|+..||.=|+..|+... ..+..++.-+.+|.
T Consensus 180 GDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred cCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHH
Confidence 9999999999998877766543221 13444555444443
No 58
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.40 E-value=1.2e-06 Score=91.61 Aligned_cols=187 Identities=12% Similarity=0.133 Sum_probs=97.7
Q ss_pred cceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccC------CCeEEEEeccchhhhHhhh
Q 003670 298 DLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRP------GMQQIIINLETPEILALEK 371 (804)
Q Consensus 298 dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~------~~~~i~i~~~~~~~~~l~~ 371 (804)
|.||+..--=..+..+.+.++|++++++|++++++||+....+..+.++.++..+ |+..+...+.... .
T Consensus 9 DGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~-----~ 83 (249)
T TIGR01485 9 DNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVP-----D 83 (249)
T ss_pred CCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcC-----C
Confidence 5566621111355788999999999999999999999999999999988886543 3333332221000 0
Q ss_pred hchhHHHHHHhhhhHHHHhhhcccccccCC---CCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceE----EEcCC
Q 003670 372 TGAKSEITKASKESVLHQINEGKNQLSASG---GSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVI----CCRSS 444 (804)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi----~~r~s 444 (804)
......+...........+......+.... .......+..+.......+ ..+.+.+......+..++ +..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~ 162 (249)
T TIGR01485 84 QHWAEYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDIL 162 (249)
T ss_pred HHHHHHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEE
Confidence 000000100000000011111111111110 1112223332222211111 122333332111222112 22445
Q ss_pred hh--hHHHHHHHHHccC---CCeEEEecCCcCChhhhhh-cCcceeecCcch
Q 003670 445 PR--QKALVTRLVKSGT---GKTTLAIGDGANDVGMLQE-ADIGIGISGVEG 490 (804)
Q Consensus 445 P~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~-AdvGI~i~g~~~ 490 (804)
|. .|+..++.+.+.. ...|+++||+.||++|++. ++.||+|.+...
T Consensus 163 ~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 163 PQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred eCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 43 6998888887653 4689999999999999998 679999966543
No 59
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.39 E-value=1.1e-06 Score=91.12 Aligned_cols=56 Identities=23% Similarity=0.303 Sum_probs=45.2
Q ss_pred cCChh--hHHHHHHHHHccCC---CeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccc
Q 003670 442 RSSPR--QKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSD 498 (804)
Q Consensus 442 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD 498 (804)
.+.|. .|...++.+.++.+ ..++++||+.||++|++.|++||+|.+... .++..||
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~-~~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDP-ELEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcH-HHHHhhc
Confidence 45554 69999998877543 469999999999999999999999966544 4788888
No 60
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.38 E-value=1.4e-06 Score=83.81 Aligned_cols=96 Identities=14% Similarity=0.183 Sum_probs=70.6
Q ss_pred HHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhccccc
Q 003670 318 CIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQL 397 (804)
Q Consensus 318 ~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (804)
+|+.|++.|+++.|+||+....+..+....|+-. .
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~----~----------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH----L----------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----E-----------------------------------------
Confidence 8999999999999999999999999998888731 0
Q ss_pred ccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHcc---CCCeEEEecCCcCChh
Q 003670 398 SASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG---TGKTTLAIGDGANDVG 474 (804)
Q Consensus 398 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ 474 (804)
+++ . ..|...++.+.+. ..+.++++||+.||++
T Consensus 71 -------------~~~-----------------------------~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 71 -------------YQG-----------------------------Q--SNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred -------------Eec-----------------------------c--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 000 0 1223233322221 3467999999999999
Q ss_pred hhhhcCcceeecCcchhhhhcccchhcch
Q 003670 475 MLQEADIGIGISGVEGMQAVMSSDIAIAQ 503 (804)
Q Consensus 475 ml~~AdvGI~i~g~~~~~a~~aaD~~i~~ 503 (804)
|++.|++++++.+... ..+..+|+++..
T Consensus 107 ~~~~ag~~~~v~~~~~-~~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHP-LLIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCH-HHHHhCCEEecC
Confidence 9999999999965543 367778888753
No 61
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.37 E-value=1.5e-06 Score=89.24 Aligned_cols=37 Identities=19% Similarity=0.212 Sum_probs=34.4
Q ss_pred ChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 314 GVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 314 ~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
.+.++|+.|+++|++++++||+....+..+...+++-
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3899999999999999999999999999999999863
No 62
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.36 E-value=1.2e-06 Score=85.00 Aligned_cols=97 Identities=11% Similarity=0.132 Sum_probs=73.2
Q ss_pred HHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccc
Q 003670 317 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQ 396 (804)
Q Consensus 317 ~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (804)
..|+.|+++|+++.|+|+.....+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 57999999999999999999999999999999831
Q ss_pred cccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcC--ChhhHHHHHHHHHccCCCeEEEecCCcCChh
Q 003670 397 LSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRS--SPRQKALVTRLVKSGTGKTTLAIGDGANDVG 474 (804)
Q Consensus 397 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~--sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 474 (804)
.|... .|+--..+++.+.- ....+++|||+.||++
T Consensus 76 ------------------------------------------~f~~~kpkp~~~~~~~~~l~~-~~~ev~~iGD~~nDi~ 112 (169)
T TIGR02726 76 ------------------------------------------FHEGIKKKTEPYAQMLEEMNI-SDAEVCYVGDDLVDLS 112 (169)
T ss_pred ------------------------------------------EEecCCCCHHHHHHHHHHcCc-CHHHEEEECCCHHHHH
Confidence 01101 12222233333322 3467999999999999
Q ss_pred hhhhcCcceeecCcchhhhhcccchhcc
Q 003670 475 MLQEADIGIGISGVEGMQAVMSSDIAIA 502 (804)
Q Consensus 475 ml~~AdvGI~i~g~~~~~a~~aaD~~i~ 502 (804)
|++.|+++++|.+... .++..|+++..
T Consensus 113 ~~~~ag~~~am~nA~~-~lk~~A~~I~~ 139 (169)
T TIGR02726 113 MMKRVGLAVAVGDAVA-DVKEAAAYVTT 139 (169)
T ss_pred HHHHCCCeEECcCchH-HHHHhCCEEcC
Confidence 9999999999976553 47888998875
No 63
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.36 E-value=5.5e-05 Score=83.98 Aligned_cols=286 Identities=14% Similarity=0.194 Sum_probs=170.4
Q ss_pred HHHhhhccceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchh-----
Q 003670 291 VTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPE----- 365 (804)
Q Consensus 291 ~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~----- 365 (804)
..++.-.+-.|.|++...-+.+.+....|+.|-++.|+.+..+-.+.....-.|.++||-....--+.+..+...
T Consensus 807 ~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~ 886 (1354)
T KOG4383|consen 807 ACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREA 886 (1354)
T ss_pred HHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccC
Confidence 344555788999999999999999999999999999999999999999999999999996544333333222110
Q ss_pred -----hhHhhhhchhHHHHHHhhhh---HHHHhhhcccccccCCCCCCCeEEEEechhhhHhhhH-----------HHHH
Q 003670 366 -----ILALEKTGAKSEITKASKES---VLHQINEGKNQLSASGGSSEAFALIIDGKSLTYALED-----------DIKN 426 (804)
Q Consensus 366 -----~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~-----------~~~~ 426 (804)
...-.+....+.++....++ .....+++.....+-.. +|.. .....++ +.+.
T Consensus 887 ~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~--------~dsd-i~kf~ed~N~AkLPrGihnVRP 957 (1354)
T KOG4383|consen 887 GPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQK--------MDSD-IAKFAEDPNIAKLPRGIHNVRP 957 (1354)
T ss_pred CCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccc--------cccc-hhhhcCCCchhhcCcchhhcCc
Confidence 00001111111111111110 00011111111100000 0000 0000000 1112
Q ss_pred HHHHHHhc-CCceEEEcCChhhHHHHHHHHHccCCCeEEEecCCcCC--hhhhhhcCcceeecCcchhhh----------
Q 003670 427 KFLELAIG-CASVICCRSSPRQKALVTRLVKSGTGKTTLAIGDGAND--VGMLQEADIGIGISGVEGMQA---------- 493 (804)
Q Consensus 427 ~~~~~~~~-~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND--~~ml~~AdvGI~i~g~~~~~a---------- 493 (804)
|+.++--. --.-.|.+++|+.--++++.+|+ .|++|++.|..+|- ....-.|||+|++..-+...+
T Consensus 958 HL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~ass 1036 (1354)
T KOG4383|consen 958 HLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASS 1036 (1354)
T ss_pred ccccccCcceeeeeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchh
Confidence 22221100 00126889999999999999999 89999999999984 334568999998865322210
Q ss_pred --------------------hcccchhcchHhh--HHHHHHHhhccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 003670 494 --------------------VMSSDIAIAQFRY--LERLLLVHGHWCYRRISSMICYFFYKNITFGLSVFLYEAYTTFSG 551 (804)
Q Consensus 494 --------------------~~aaD~~i~~f~~--l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~s~ 551 (804)
..+.|+...+-.. +.+| ++..|....-+++.++|.++..+.+..++|+..++. -
T Consensus 1037 ismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---L 1112 (1354)
T KOG4383|consen 1037 ISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---L 1112 (1354)
T ss_pred hhhhhhcCCCCceeecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---c
Confidence 1123333333222 3344 778888888899999999999999988888776654 3
Q ss_pred cccchHHHHHHHHHHHhhhhHHHHh-ccccCCChhh-hhccch
Q 003670 552 QPAYNDWFLSLYNVFFTSLPVIALG-VFDQDVSARF-CLKFPL 592 (804)
Q Consensus 552 ~~~~~~~~~~~~n~~~~~lp~~~l~-~~~~d~~~~~-~~~~P~ 592 (804)
.++++.-+++|.+.+- +|.+++| ++.+...+.. ++.-|+
T Consensus 1113 P~i~s~sdii~lScfc--~PlL~i~tL~gk~~hkSii~maagK 1153 (1354)
T KOG4383|consen 1113 PIIFSHSDIILLSCFC--IPLLFIGTLFGKFEHKSIIIMAAGK 1153 (1354)
T ss_pred cchhccchHHHHHHHH--HHHHHHHHHhcCCCccceEEeeccC
Confidence 4457777777777664 7888888 5555444443 344454
No 64
>PTZ00174 phosphomannomutase; Provisional
Probab=98.34 E-value=1.3e-06 Score=91.05 Aligned_cols=50 Identities=24% Similarity=0.370 Sum_probs=39.4
Q ss_pred EEcCChh--hHHHHHHHHHccCCCeEEEecC----CcCChhhhhhc-CcceeecCcch
Q 003670 440 CCRSSPR--QKALVTRLVKSGTGKTTLAIGD----GANDVGMLQEA-DIGIGISGVEG 490 (804)
Q Consensus 440 ~~r~sP~--qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~A-dvGI~i~g~~~ 490 (804)
+..+.|. .|+..++.+.+. .+.|++||| |.||++||+.| -.|+++++.+.
T Consensus 179 ~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 179 SFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 3455554 699999999884 789999999 99999999976 56777765544
No 65
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.32 E-value=2.9e-06 Score=97.42 Aligned_cols=176 Identities=13% Similarity=0.083 Sum_probs=94.1
Q ss_pred ccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc----ccCCCeEEEEecc---------------chhhhHhhh
Q 003670 311 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL----LRPGMQQIIINLE---------------TPEILALEK 371 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl----~~~~~~~i~i~~~---------------~~~~~~l~~ 371 (804)
.-+.+.++|+.|+++||+++++||+....+..+++++++ +..|+..+..... ......++.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~ 513 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAY 513 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCCH
Confidence 445679999999999999999999999999999999885 4445555544221 011122233
Q ss_pred hchhHHHHHHhhhhHHHHhh----hcccccccC----------------------CCCCCCeEEEEechhhhHhhhHHHH
Q 003670 372 TGAKSEITKASKESVLHQIN----EGKNQLSAS----------------------GGSSEAFALIIDGKSLTYALEDDIK 425 (804)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----------------------~~~~~~~~lvi~G~~l~~~l~~~~~ 425 (804)
+...+.++...+ .....+. .....+... ........+.+.|..-. + +.+.
T Consensus 514 e~i~~IL~~lke-~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~gd~e~--L-eel~ 589 (694)
T PRK14502 514 KDIRHILKKALA-EACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEGDKRS--T-NIVL 589 (694)
T ss_pred HHHHHHHHHHHH-hhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcCCHHH--H-HHHH
Confidence 333333333222 1100000 000000000 00001122333332110 1 1222
Q ss_pred HHHHHHHh-cCCceEEEcCC-hhhHHHHHHHHHccC---CCeEEEe--cCCcCChhhhhhcCcceeecCcch
Q 003670 426 NKFLELAI-GCASVICCRSS-PRQKALVTRLVKSGT---GKTTLAI--GDGANDVGMLQEADIGIGISGVEG 490 (804)
Q Consensus 426 ~~~~~~~~-~~~~vi~~r~s-P~qK~~iv~~lk~~~---~~~vlai--GDG~ND~~ml~~AdvGI~i~g~~~ 490 (804)
..+..... ....--|..+. --+|+..++.+.+.. .+.|+++ |||.||++||+.||+||+|++..+
T Consensus 590 ~~L~~~~l~v~~g~rfleI~~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~ 661 (694)
T PRK14502 590 NHIQQSGLEYSFGGRFYEVTGGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGN 661 (694)
T ss_pred HHHHHcCcEEEECCEEEEeCCCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCC
Confidence 22222100 00112244443 347999999887753 2456666 999999999999999999976554
No 66
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.27 E-value=6.2e-06 Score=83.44 Aligned_cols=125 Identities=21% Similarity=0.204 Sum_probs=86.0
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 389 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 389 (804)
++.||+++.++.|+++ +++.++||.....+..+...+|+-.--...+..+.+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3689999999999999 9999999999999999999888732100111111000
Q ss_pred hhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEc-CChhhHHHHHHHHHccCCCeEEEecC
Q 003670 390 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCR-SSPRQKALVTRLVKSGTGKTTLAIGD 468 (804)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r-~sP~qK~~iv~~lk~~~~~~vlaiGD 468 (804)
.+ +... ..|..|...++.++. .+..+++|||
T Consensus 121 --------------------~i---------------------------~~~~~~~p~~k~~~l~~~~~-~~~~~v~iGD 152 (205)
T PRK13582 121 --------------------MI---------------------------TGYDLRQPDGKRQAVKALKS-LGYRVIAAGD 152 (205)
T ss_pred --------------------eE---------------------------ECccccccchHHHHHHHHHH-hCCeEEEEeC
Confidence 00 0011 136677777887776 6788999999
Q ss_pred CcCChhhhhhcCcceeecCcchhhhhcccch-hcchHhhHHHH
Q 003670 469 GANDVGMLQEADIGIGISGVEGMQAVMSSDI-AIAQFRYLERL 510 (804)
Q Consensus 469 G~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~-~i~~f~~l~~l 510 (804)
|.||+.|.+.|++|+.....+.. ....++. ++.+++.+..+
T Consensus 153 s~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 153 SYNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred CHHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 99999999999999987544332 2234454 67776665444
No 67
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.23 E-value=3e-06 Score=84.04 Aligned_cols=112 Identities=16% Similarity=0.180 Sum_probs=78.5
Q ss_pred HHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccc
Q 003670 317 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQ 396 (804)
Q Consensus 317 ~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (804)
.+|+.|+++|+++.++||+....+..+++++|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999988631
Q ss_pred cccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHcc---CCCeEEEecCCcCCh
Q 003670 397 LSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG---TGKTTLAIGDGANDV 473 (804)
Q Consensus 397 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND~ 473 (804)
++. ..+.|...++.+.+. ....+++|||+.||+
T Consensus 90 ------------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 90 ------------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred ------------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000 011233223322221 346799999999999
Q ss_pred hhhhhcCcceeecCcchhhhhcccchhcc------hHhhHHHHH-HHhhccc
Q 003670 474 GMLQEADIGIGISGVEGMQAVMSSDIAIA------QFRYLERLL-LVHGHWC 518 (804)
Q Consensus 474 ~ml~~AdvGI~i~g~~~~~a~~aaD~~i~------~f~~l~~ll-l~~Gr~~ 518 (804)
.|++.|++++++... ...+...+|+++. ..+.+..++ ...|+|-
T Consensus 126 ~~a~~aG~~~~v~~~-~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~ 176 (183)
T PRK09484 126 PVMEKVGLSVAVADA-HPLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLD 176 (183)
T ss_pred HHHHHCCCeEecCCh-hHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChh
Confidence 999999999988543 3346678899885 345555543 4556553
No 68
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.21 E-value=8e-06 Score=82.61 Aligned_cols=172 Identities=16% Similarity=0.198 Sum_probs=89.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcC--cccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACS--LLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL 387 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~g--l~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 387 (804)
++.+.+.++|++|++.|++++++||+....+..+..+++ ++..|+..+...++..... ..+.....+... +.+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 92 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE--PSDVFEEILGIK--EEIG 92 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc--ccccHHHHHHhh--hhcC
Confidence 477889999999999999999999999999999988743 4555655554432221110 111111111111 1111
Q ss_pred HHhhhcccccccC--CCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhc-CC------ceEEEcCCh--hhHHHHHHHHH
Q 003670 388 HQINEGKNQLSAS--GGSSEAFALIIDGKSLTYALEDDIKNKFLELAIG-CA------SVICCRSSP--RQKALVTRLVK 456 (804)
Q Consensus 388 ~~~~~~~~~~~~~--~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~-~~------~vi~~r~sP--~qK~~iv~~lk 456 (804)
..+.......... ............+..........+...+...... .. ..-+..+.| ..|...++.+.
T Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~ 172 (204)
T TIGR01484 93 AELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALL 172 (204)
T ss_pred ceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHH
Confidence 0010000000000 0111122222222101111111222222211100 01 112234455 46998888887
Q ss_pred ccCC---CeEEEecCCcCChhhhhhcCcceee
Q 003670 457 SGTG---KTTLAIGDGANDVGMLQEADIGIGI 485 (804)
Q Consensus 457 ~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i 485 (804)
+..+ ..++++||+.||.+|++.|++||+|
T Consensus 173 ~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 173 KELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6533 5799999999999999999999987
No 69
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.18 E-value=4.7e-06 Score=83.91 Aligned_cols=118 Identities=20% Similarity=0.228 Sum_probs=78.6
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 389 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 389 (804)
++.+++.+.|+.|++.|+++.++||-....+..++..+|+..--...+..+....
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~------------------------- 134 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGF------------------------- 134 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCe-------------------------
Confidence 5899999999999999999999999999999999999886321001111110000
Q ss_pred hhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHcc---CCCeEEEe
Q 003670 390 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG---TGKTTLAI 466 (804)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlai 466 (804)
..+ ..+....|..|..+++.+.+. ..+.+++|
T Consensus 135 ---------------------~~p------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 135 ---------------------IQP------------------------DGIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred ---------------------Eec------------------------ceeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 000 011123355676666655442 24579999
Q ss_pred cCCcCChhhhhhcCcceeecCcchhhhhcccc
Q 003670 467 GDGANDVGMLQEADIGIGISGVEGMQAVMSSD 498 (804)
Q Consensus 467 GDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD 498 (804)
||+.||++|++.||+++++.+. +.....|+|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~-~~~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDE-GHADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCC-ccchhhccc
Confidence 9999999999999999999443 322444444
No 70
>PLN02382 probable sucrose-phosphatase
Probab=98.14 E-value=1.5e-05 Score=89.06 Aligned_cols=176 Identities=13% Similarity=0.110 Sum_probs=91.6
Q ss_pred hHHHH-HHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCC------CeEEEEeccchhhhHhhhhchhHHHHHHhhhhHH
Q 003670 315 VPDCI-DKLAQAGIKIWVLTGDKMETAINIGFACSLLRPG------MQQIIINLETPEILALEKTGAKSEITKASKESVL 387 (804)
Q Consensus 315 v~~~I-~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~------~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 387 (804)
...++ +++++.|+.++++||+.+..+..+.++.++..++ +..+....... ....-...+.........
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~-----~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMV-----PDHGWVEYLNKKWDREIV 107 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCc-----cChhHHHHHhccCChhhH
Confidence 34445 8889999999999999999999999999886654 22222211110 000111111110000100
Q ss_pred HHhhhcccccc--cCCC-CCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCC----ceEEEcCChh--hHHHHHHHHHcc
Q 003670 388 HQINEGKNQLS--ASGG-SSEAFALIIDGKSLTYALEDDIKNKFLELAIGCA----SVICCRSSPR--QKALVTRLVKSG 458 (804)
Q Consensus 388 ~~~~~~~~~~~--~~~~-~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~----~vi~~r~sP~--qK~~iv~~lk~~ 458 (804)
.........+. .... ...+..+..+......+ .+.+.+.+......+. .--+..+.|. .|+..++.+.++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~ 186 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK 186 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH
Confidence 00001110111 1111 11222333333222221 2233333322111111 1124456665 499999988775
Q ss_pred C------CCeEEEecCCcCChhhhhhcC-cceeecCcchhhhhccc
Q 003670 459 T------GKTTLAIGDGANDVGMLQEAD-IGIGISGVEGMQAVMSS 497 (804)
Q Consensus 459 ~------~~~vlaiGDG~ND~~ml~~Ad-vGI~i~g~~~~~a~~aa 497 (804)
. ...|+++||+.||++||+.|+ .||+|++.... .+..+
T Consensus 187 ~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~~a 231 (413)
T PLN02382 187 LKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQWY 231 (413)
T ss_pred hhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHHHH
Confidence 3 358999999999999999999 69999665443 45433
No 71
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.14 E-value=9.5e-06 Score=85.47 Aligned_cols=180 Identities=13% Similarity=0.098 Sum_probs=93.1
Q ss_pred cccCChHHHHHHHHh-cCCeEEEEcCCCHhhHHHHHHHcCc--ccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhH
Q 003670 310 KLQNGVPDCIDKLAQ-AGIKIWVLTGDKMETAINIGFACSL--LRPGMQQIIINLETPEILALEKTGAKSEITKASKESV 386 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~-aGIkv~~lTGD~~~ta~~ia~~~gl--~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~ 386 (804)
.+-+++.++|++|++ .|++++++||+....+..+...+++ +..++..+.-.........+..+...+... . +
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~-~----l 110 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISV-Q----L 110 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHH-H----H
Confidence 456789999999998 8999999999999999888876653 333333322111110011111111111111 0 1
Q ss_pred HHHhhhc-ccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcC------CceEEEcCChh--hHHHHHHHHHc
Q 003670 387 LHQINEG-KNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGC------ASVICCRSSPR--QKALVTRLVKS 457 (804)
Q Consensus 387 ~~~~~~~-~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~------~~vi~~r~sP~--qK~~iv~~lk~ 457 (804)
...+... ...+.. ....++ ........ -++.+......+.... ...-+.++.|. .|+..++.+.+
T Consensus 111 ~~~~~~~pg~~ve~---k~~~~~--~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~ 184 (266)
T PRK10187 111 HTALAQLPGAELEA---KGMAFA--LHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQ 184 (266)
T ss_pred HHHhccCCCcEEEe---CCcEEE--EECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHH
Confidence 0101000 011110 111122 22111110 0011111111111111 11233444554 79988887766
Q ss_pred cC---CCeEEEecCCcCChhhhhhc----CcceeecCcchhhhhcccchhcchHh
Q 003670 458 GT---GKTTLAIGDGANDVGMLQEA----DIGIGISGVEGMQAVMSSDIAIAQFR 505 (804)
Q Consensus 458 ~~---~~~vlaiGDG~ND~~ml~~A----dvGI~i~g~~~~~a~~aaD~~i~~f~ 505 (804)
.. .+.++++||+.||.+|++.+ +.||+|++.. ..|++.+.+-.
T Consensus 185 ~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a~-----~~A~~~l~~~~ 234 (266)
T PRK10187 185 EAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTGA-----TQASWRLAGVP 234 (266)
T ss_pred hcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCCC-----CcCeEeCCCHH
Confidence 53 46899999999999999999 9999995432 35777777633
No 72
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.12 E-value=1.7e-05 Score=82.27 Aligned_cols=41 Identities=7% Similarity=-0.006 Sum_probs=37.5
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
+..-+.+.++|++|+++||.++++||+.......+..++++
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 34667799999999999999999999999999999999997
No 73
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.08 E-value=1e-05 Score=80.71 Aligned_cols=39 Identities=21% Similarity=0.236 Sum_probs=35.7
Q ss_pred CChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCccc
Q 003670 313 NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 351 (804)
Q Consensus 313 ~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 351 (804)
+++++.|+.++++|++++|+||.....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 666699999999999999999999999999999999853
No 74
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.03 E-value=2.7e-05 Score=79.46 Aligned_cols=139 Identities=14% Similarity=0.191 Sum_probs=84.7
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHH
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 388 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 388 (804)
-++++|+++.++.|++.|+++.|+||.....+..+....+... . +.-+.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~-i~~n~--------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---R-IYCNE--------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---c-EEece---------------------------
Confidence 4699999999999999999999999999988888887664311 1 10000
Q ss_pred HhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecC
Q 003670 389 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGD 468 (804)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 468 (804)
+.++|..+..... + .+. .-+.......|..+++.++. ....+++|||
T Consensus 118 --------------------~~~~~~~~~~~~p-~----------~~~-~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGD 164 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDWP-H----------PCD-GTCQNQCGCCKPSLIRKLSE-PNDYHIVIGD 164 (214)
T ss_pred --------------------eEeeCCeeEEeCC-C----------CCc-cccccCCCCCHHHHHHHHhh-cCCcEEEEeC
Confidence 0111111100000 0 000 00001113578999998886 5677899999
Q ss_pred CcCChhhhhhcCcceeecCc-chhhhhcccchhcchHhhHHHHH
Q 003670 469 GANDVGMLQEADIGIGISGV-EGMQAVMSSDIAIAQFRYLERLL 511 (804)
Q Consensus 469 G~ND~~ml~~AdvGI~i~g~-~~~~a~~aaD~~i~~f~~l~~ll 511 (804)
|.||+.|.+.||++++-..- +..+-...+.+...+|..+...|
T Consensus 165 g~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 165 SVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred CHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 99999999999997765311 11112223455556666665554
No 75
>PRK08238 hypothetical protein; Validated
Probab=98.01 E-value=0.0015 Score=74.32 Aligned_cols=40 Identities=20% Similarity=0.163 Sum_probs=37.9
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++++++.+.|++++++|++++++||-....+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999987
No 76
>PLN02954 phosphoserine phosphatase
Probab=97.99 E-value=2.9e-05 Score=79.74 Aligned_cols=41 Identities=17% Similarity=0.431 Sum_probs=38.4
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|++++++.|+++|+++.|+||.....+..+...+|+-
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999998884
No 77
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.86 E-value=0.00023 Score=86.06 Aligned_cols=184 Identities=14% Similarity=0.106 Sum_probs=96.2
Q ss_pred ccCChHHHHHHHHh-cCCeEEEEcCCCHhhHHHHHHHcC--cccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHH
Q 003670 311 LQNGVPDCIDKLAQ-AGIKIWVLTGDKMETAINIGFACS--LLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL 387 (804)
Q Consensus 311 lr~~v~~~I~~L~~-aGIkv~~lTGD~~~ta~~ia~~~g--l~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 387 (804)
+.+++.++|++|.+ .|+.|+++||+............+ ++..++..+...+..-.........-.+.+.. +.
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~-----il 589 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRP-----IL 589 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHH-----HH
Confidence 56788899999999 699999999999998888766554 44455544432222100000000000111111 11
Q ss_pred HHhhhcccccccCCCCCCCeEEEEe--c--hhhhHhhhHHHHHHHHHHHhcCCceE-----EEcCChh--hHHHHHHHHH
Q 003670 388 HQINEGKNQLSASGGSSEAFALIID--G--KSLTYALEDDIKNKFLELAIGCASVI-----CCRSSPR--QKALVTRLVK 456 (804)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~lvi~--G--~~l~~~l~~~~~~~~~~~~~~~~~vi-----~~r~sP~--qK~~iv~~lk 456 (804)
..+......... ......+... . ..+.....+++..++..........+ +..+.|. +|+..++.+.
T Consensus 590 ~~~~~~~~gs~i---e~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll 666 (726)
T PRK14501 590 EEFVDRTPGSFI---EEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666 (726)
T ss_pred HHHHhcCCCcEE---EEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHH
Confidence 111110000000 0011222221 1 11111111233334433322212112 2244453 6999999888
Q ss_pred cc-CCCeEEEecCCcCChhhhhhc---CcceeecCcchhhhhcccchhcchHhhH
Q 003670 457 SG-TGKTTLAIGDGANDVGMLQEA---DIGIGISGVEGMQAVMSSDIAIAQFRYL 507 (804)
Q Consensus 457 ~~-~~~~vlaiGDG~ND~~ml~~A---dvGI~i~g~~~~~a~~aaD~~i~~f~~l 507 (804)
+. ....++++||+.||.+|++.+ +.||+|++ +..+|++.+.+-..+
T Consensus 667 ~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~eV 716 (726)
T PRK14501 667 EAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQREV 716 (726)
T ss_pred hcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHHH
Confidence 64 346899999999999999987 57777744 345788888865443
No 78
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.82 E-value=5e-05 Score=70.56 Aligned_cols=116 Identities=20% Similarity=0.227 Sum_probs=76.3
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHH
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL 387 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 387 (804)
..++.+++++.+++|++.|++++++||.....+......+++...-..++..+.......
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------------- 81 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYP-------------------- 81 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcc--------------------
Confidence 448899999999999999999999999999999999999887321111111110000000
Q ss_pred HHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEec
Q 003670 388 HQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIG 467 (804)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 467 (804)
. .... .....+++.+-.|..+..+.+.+.. ....++++|
T Consensus 82 ------------------~-~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ig 120 (139)
T cd01427 82 ------------------K-EGLF---------------------LGGGPFDIGKPNPDKLLAALKLLGV-DPEEVLMVG 120 (139)
T ss_pred ------------------c-cccc---------------------ccccccccCCCCHHHHHHHHHHcCC-ChhhEEEeC
Confidence 0 0000 0111235556667777777777755 567899999
Q ss_pred CCcCChhhhhhc-Cccee
Q 003670 468 DGANDVGMLQEA-DIGIG 484 (804)
Q Consensus 468 DG~ND~~ml~~A-dvGI~ 484 (804)
|+.+|+.|.+.+ .-+|+
T Consensus 121 D~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 121 DSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHcCCceee
Confidence 999999999984 44443
No 79
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.80 E-value=6.6e-05 Score=73.89 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=37.4
Q ss_pred ccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 311 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
+++++.+.++.+++.|++++++||.....+..++...|+-
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 6799999999999999999999999999999999998874
No 80
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.79 E-value=8.5e-05 Score=73.80 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=38.5
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 479999999999999999999999999999999988888873
No 81
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.78 E-value=8.2e-05 Score=75.02 Aligned_cols=111 Identities=14% Similarity=0.024 Sum_probs=76.2
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHH
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL 387 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 387 (804)
..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+..+.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45689999999999999999999999999999999999998732100000000000
Q ss_pred HHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccC---CCeEE
Q 003670 388 HQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGT---GKTTL 464 (804)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~---~~~vl 464 (804)
..+|+.. .-.+.++.|...++.+.+.. .+.++
T Consensus 141 ----------------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 1111111 01123567776666554322 34789
Q ss_pred EecCCcCChhhhhhcCcceeecC
Q 003670 465 AIGDGANDVGMLQEADIGIGISG 487 (804)
Q Consensus 465 aiGDG~ND~~ml~~AdvGI~i~g 487 (804)
++||+.+|++|++.|+.++.+..
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCC
Confidence 99999999999999999998854
No 82
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.76 E-value=0.00014 Score=74.49 Aligned_cols=38 Identities=11% Similarity=0.199 Sum_probs=35.5
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 347 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 347 (804)
+++||+.+.++.|++.|+++.|+||-....+..+....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999998888888876
No 83
>PLN02423 phosphomannomutase
Probab=97.65 E-value=0.00015 Score=75.37 Aligned_cols=176 Identities=12% Similarity=0.088 Sum_probs=91.5
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHH-c-----CcccCCCeEEEEeccchhh----hHhhhhchhHHHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA-C-----SLLRPGMQQIIINLETPEI----LALEKTGAKSEIT 379 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~-~-----gl~~~~~~~i~i~~~~~~~----~~l~~~~~~~~~~ 379 (804)
++.+.+.++|++|++. ++++++||+........... + .++..|+..+..+++.... ..++.+...+.++
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~~i~~~~l~~~l~~~~~~~ii~ 102 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGKLIGTQSLKSFLGEDKLKEFIN 102 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCEEEEEecccccCCHHHHHHHHH
Confidence 5888999999999987 99999999988776544333 2 3456666555544433322 1122334444444
Q ss_pred HHhhhhHHHHhhhc-ccccccCCCCC--CC--------------eEEEEechhhhHhhhHHHHHHHHHHHh--cCCceEE
Q 003670 380 KASKESVLHQINEG-KNQLSASGGSS--EA--------------FALIIDGKSLTYALEDDIKNKFLELAI--GCASVIC 440 (804)
Q Consensus 380 ~~~~~~~~~~~~~~-~~~~~~~~~~~--~~--------------~~lvi~G~~l~~~l~~~~~~~~~~~~~--~~~~vi~ 440 (804)
..........+... ...+....... .. .-..+. .... -+...+.++|..+.. ......+
T Consensus 103 ~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~-~~~~-~~~~~l~~~~~~~~~~~s~~g~~~ 180 (245)
T PLN02423 103 FTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVH-NIRP-KMVSVLREKFAHLNLTYSIGGQIS 180 (245)
T ss_pred HHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccc-hHHH-HHHHHHHHhCCCCcEEEecCCcEE
Confidence 33221111111110 00000000000 00 000011 1111 011122222321111 0011134
Q ss_pred EcCChh--hHHHHHHHHHccCCCeEEEecC----CcCChhhhhh-cCcceeecCcch
Q 003670 441 CRSSPR--QKALVTRLVKSGTGKTTLAIGD----GANDVGMLQE-ADIGIGISGVEG 490 (804)
Q Consensus 441 ~r~sP~--qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~-AdvGI~i~g~~~ 490 (804)
.++.|. .|+..++.++ ....|+|+|| |.||.+||+. -=.|+.+++-+.
T Consensus 181 iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 181 FDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 455555 5999999998 6789999999 8999999996 667888877543
No 84
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.64 E-value=0.00014 Score=67.28 Aligned_cols=104 Identities=14% Similarity=0.205 Sum_probs=76.6
Q ss_pred HHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHHhhhcccc
Q 003670 317 DCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQINEGKNQ 396 (804)
Q Consensus 317 ~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (804)
..|+.|.++||++-++||++...+..-|+++|+-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47999999999999999999999999999999821
Q ss_pred cccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHcc---CCCeEEEecCCcCCh
Q 003670 397 LSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSG---TGKTTLAIGDGANDV 473 (804)
Q Consensus 397 ~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND~ 473 (804)
+.-| -++|....+.+.+. .-..|+.+||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0001 12344333333332 346799999999999
Q ss_pred hhhhhcCcceeecCcchhhhhcccchhcch------HhhHHHH
Q 003670 474 GMLQEADIGIGISGVEGMQAVMSSDIAIAQ------FRYLERL 510 (804)
Q Consensus 474 ~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~------f~~l~~l 510 (804)
|+|+..+.+++..+... ..++.||++... .+....+
T Consensus 113 pvm~~vGls~a~~dAh~-~v~~~a~~Vt~~~GG~GAvREv~dl 154 (170)
T COG1778 113 PVMEKVGLSVAVADAHP-LLKQRADYVTSKKGGEGAVREVCDL 154 (170)
T ss_pred HHHHHcCCcccccccCH-HHHHhhHhhhhccCcchHHHHHHHH
Confidence 99999999999865443 367888888764 5555555
No 85
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.57 E-value=0.00035 Score=71.71 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=38.2
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
-++.+|+.+.++.|+++|+++.++||.....+..+....|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999998888888873
No 86
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.51 E-value=0.0004 Score=70.19 Aligned_cols=41 Identities=27% Similarity=0.338 Sum_probs=37.0
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 68899999999999999999999999888888888777763
No 87
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.43 E-value=0.00062 Score=69.71 Aligned_cols=126 Identities=21% Similarity=0.195 Sum_probs=85.4
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHH
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVL 387 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 387 (804)
+..+-+|++++++.|+++|++..++|++....+..+.+..|+..--..+
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i------------------------------- 135 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVI------------------------------- 135 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceE-------------------------------
Confidence 5578999999999999999999999999999999999998884311110
Q ss_pred HHhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEec
Q 003670 388 HQINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIG 467 (804)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 467 (804)
+.+... -...-.|.....+.+.+.. ..+.++|||
T Consensus 136 -----------------------~g~~~~----------------------~~~KP~P~~l~~~~~~~~~-~~~~~l~VG 169 (220)
T COG0546 136 -----------------------VGGDDV----------------------PPPKPDPEPLLLLLEKLGL-DPEEALMVG 169 (220)
T ss_pred -----------------------EcCCCC----------------------CCCCcCHHHHHHHHHHhCC-ChhheEEEC
Confidence 000000 0111234444455555544 334899999
Q ss_pred CCcCChhhhhhcCc---ceeecCc-chhhhhcccchhcchHhhHHHH
Q 003670 468 DGANDVGMLQEADI---GIGISGV-EGMQAVMSSDIAIAQFRYLERL 510 (804)
Q Consensus 468 DG~ND~~ml~~Adv---GI~i~g~-~~~~a~~aaD~~i~~f~~l~~l 510 (804)
|..+|+.|=+.|++ ||.-... ........+|+++.+...|...
T Consensus 170 Ds~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 170 DSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 99999999999994 4433221 2222445689999887776554
No 88
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.23 E-value=0.0013 Score=69.65 Aligned_cols=41 Identities=15% Similarity=0.189 Sum_probs=36.1
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
.++.+++.++++.|+++|+++.|+||.....+..+....++
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46889999999999999999999999988887777777665
No 89
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.22 E-value=0.0012 Score=67.01 Aligned_cols=41 Identities=17% Similarity=0.176 Sum_probs=37.6
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|+.++++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 58999999999999999999999999988888888888873
No 90
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.19 E-value=0.0024 Score=64.71 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=74.8
Q ss_pred cccCChHHHHH-HHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHH
Q 003670 310 KLQNGVPDCID-KLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 388 (804)
Q Consensus 310 ~lr~~v~~~I~-~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 388 (804)
.+.|++.++|+ .+++.|++++|+|+-....+..+|+..++.... .++..+.+.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le~------------------------- 147 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIER------------------------- 147 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeEE-------------------------
Confidence 57999999996 788899999999999999999999987664321 222211110
Q ss_pred HhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecC
Q 003670 389 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGD 468 (804)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 468 (804)
.+|. -+..-.+..++|..-++..-........+-||
T Consensus 148 ----------------------~~gg----------------------~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 148 ----------------------GNGG----------------------WVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ----------------------eCCc----------------------eEcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 0110 00122344677876555432213345678999
Q ss_pred CcCChhhhhhcCcceeecCc
Q 003670 469 GANDVGMLQEADIGIGISGV 488 (804)
Q Consensus 469 G~ND~~ml~~AdvGI~i~g~ 488 (804)
+.||.|||+.||..+.+...
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred CcccHHHHHhCCCcEEECcc
Confidence 99999999999999999554
No 91
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.16 E-value=0.002 Score=66.41 Aligned_cols=40 Identities=23% Similarity=0.125 Sum_probs=35.5
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.+|+.+.++.|++.|+++.++|+.....+..+-...|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l 134 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGW 134 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCc
Confidence 5789999999999999999999999988877777777776
No 92
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.11 E-value=0.005 Score=64.13 Aligned_cols=65 Identities=11% Similarity=0.107 Sum_probs=47.1
Q ss_pred CChhhHHHHHHHHHccC---CCeEEEecCCcCChhhhhhc--------CcceeecCcchhhhhcccchhcchHhhHHHH
Q 003670 443 SSPRQKALVTRLVKSGT---GKTTLAIGDGANDVGMLQEA--------DIGIGISGVEGMQAVMSSDIAIAQFRYLERL 510 (804)
Q Consensus 443 ~sP~qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~A--------dvGI~i~g~~~~~a~~aaD~~i~~f~~l~~l 510 (804)
..+-+|+..++.+.+.. ...++++||+.||..|++.+ ..||.+. .+. .+..|++++.+...+...
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHHHH
Confidence 34457998888877643 35799999999999999999 4667774 121 456789998876665444
No 93
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.11 E-value=0.0018 Score=65.99 Aligned_cols=41 Identities=17% Similarity=0.041 Sum_probs=37.1
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37899999999999999999999999998888888888873
No 94
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.06 E-value=0.0015 Score=68.04 Aligned_cols=162 Identities=17% Similarity=0.200 Sum_probs=81.6
Q ss_pred HHhcCCeEEEEcCCCHhhHHHHHHHcCcccCC------CeEEEEeccchhhhHhhhhchhHHHHHHhh-hhHHHHhhhcc
Q 003670 322 LAQAGIKIWVLTGDKMETAINIGFACSLLRPG------MQQIIINLETPEILALEKTGAKSEITKASK-ESVLHQINEGK 394 (804)
Q Consensus 322 L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~------~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~ 394 (804)
..+.++.++++||++.+.+..+..+.++..++ +..+.....-.....+ .+.+...-. +.+...+. ..
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w-----~~~i~~~w~~~~v~~~l~-~~ 104 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEW-----QAHIDERWDRERVEEILA-EL 104 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHH-----HHHHHTT--HHHHHHHHH-CH
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHH-----HHHHHhcCChHHHHHHHH-Hh
Confidence 44788999999999999999999999875432 2222221110000011 111111100 11111111 11
Q ss_pred ccccc---CCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCce----EEEcCChh--hHHHHHHHHHccC---CCe
Q 003670 395 NQLSA---SGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASV----ICCRSSPR--QKALVTRLVKSGT---GKT 462 (804)
Q Consensus 395 ~~~~~---~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~v----i~~r~sP~--qK~~iv~~lk~~~---~~~ 462 (804)
..+.. ........+..++.......+ +++...+......++.+ -...+-|. .|...++.++++. ...
T Consensus 105 ~~l~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~ 183 (247)
T PF05116_consen 105 PGLRPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQ 183 (247)
T ss_dssp CCEEEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGG
T ss_pred hCcccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHH
Confidence 11111 111223444555555444322 23444333222222211 12334443 6999999999863 357
Q ss_pred EEEecCCcCChhhhhhcCcceeecCcch
Q 003670 463 TLAIGDGANDVGMLQEADIGIGISGVEG 490 (804)
Q Consensus 463 vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 490 (804)
|+++||+.||.+||..++-||.+.+...
T Consensus 184 vl~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 184 VLVAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp EEEEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred EEEEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 8899999999999999999999876554
No 95
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.98 E-value=0.0035 Score=65.77 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=37.5
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|+.++++.|++.|+++.|+|+.....+..+-..+|+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 149 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGME 149 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCH
Confidence 57899999999999999999999999999998888888874
No 96
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.93 E-value=0.026 Score=68.73 Aligned_cols=61 Identities=8% Similarity=0.073 Sum_probs=42.4
Q ss_pred cceEeEEEeeeccccCChHHHHHHH-HhcCCeEEEEcCCCHhhHHHHHHH---cCcccCCCeEEE
Q 003670 298 DLVLLGATAVEDKLQNGVPDCIDKL-AQAGIKIWVLTGDKMETAINIGFA---CSLLRPGMQQII 358 (804)
Q Consensus 298 dl~llG~~~i~D~lr~~v~~~I~~L-~~aGIkv~~lTGD~~~ta~~ia~~---~gl~~~~~~~i~ 358 (804)
|.||+-.....-.+.+++.+++++| ++.|+.|+++||+...+....... ++++..++..+.
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir 668 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLR 668 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEE
Confidence 4555533222224567888999997 778999999999999999888754 345655555443
No 97
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.89 E-value=0.0037 Score=64.04 Aligned_cols=42 Identities=17% Similarity=0.175 Sum_probs=37.9
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
-++.+|+.++|+.|++.|+++.++||.....+..+.+..++.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 468899999999999999999999999998888888888863
No 98
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.85 E-value=0.005 Score=65.08 Aligned_cols=41 Identities=17% Similarity=0.188 Sum_probs=38.0
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|+.++++.|++.|+++.|+|+.....+..+-..+|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999998888873
No 99
>PRK11590 hypothetical protein; Provisional
Probab=96.84 E-value=0.009 Score=60.70 Aligned_cols=110 Identities=14% Similarity=0.117 Sum_probs=75.8
Q ss_pred cccCChHHHH-HHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHH
Q 003670 310 KLQNGVPDCI-DKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLH 388 (804)
Q Consensus 310 ~lr~~v~~~I-~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 388 (804)
.+.|++.+.| +.+++.|++++|+|+-....+..++..+|+.. ...++..+.+.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~------------------------- 148 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQR------------------------- 148 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEE-------------------------
Confidence 4589999999 57888999999999999999999999988632 11222221110
Q ss_pred HhhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChhhHHHHHHHHHccCCCeEEEecC
Q 003670 389 QINEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPRQKALVTRLVKSGTGKTTLAIGD 468 (804)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 468 (804)
..+|+ +....+..+.|..-++..-........+-||
T Consensus 149 ---------------------~~tg~-----------------------~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 149 ---------------------RYGGW-----------------------VLTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred ---------------------EEccE-----------------------ECCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 01111 1122355678876665432213455678999
Q ss_pred CcCChhhhhhcCcceeecCcc
Q 003670 469 GANDVGMLQEADIGIGISGVE 489 (804)
Q Consensus 469 G~ND~~ml~~AdvGI~i~g~~ 489 (804)
+.||.|||+.|+.++.+....
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~ 205 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRG 205 (211)
T ss_pred CcccHHHHHhCCCCEEECccH
Confidence 999999999999999996543
No 100
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.73 E-value=0.0051 Score=64.27 Aligned_cols=45 Identities=18% Similarity=0.338 Sum_probs=40.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCC
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGM 354 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~ 354 (804)
++++|+++.++.|++.|+++.++||-....+..+.++.|+...+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~ 165 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV 165 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc
Confidence 479999999999999999999999999999999999999865543
No 101
>PRK11587 putative phosphatase; Provisional
Probab=96.68 E-value=0.0069 Score=61.84 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=32.6
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.||+.++++.|+++|+++.++|+.....+...-...++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 4789999999999999999999999877665555444554
No 102
>PLN02580 trehalose-phosphatase
Probab=96.61 E-value=0.032 Score=61.14 Aligned_cols=68 Identities=16% Similarity=0.174 Sum_probs=47.0
Q ss_pred EEcCChh---hHHHHHHHHHccCC---C---eEEEecCCcCChhhhhh-----cCcceeecCcchhhhhcccchhcchHh
Q 003670 440 CCRSSPR---QKALVTRLVKSGTG---K---TTLAIGDGANDVGMLQE-----ADIGIGISGVEGMQAVMSSDIAIAQFR 505 (804)
Q Consensus 440 ~~r~sP~---qK~~iv~~lk~~~~---~---~vlaiGDG~ND~~ml~~-----AdvGI~i~g~~~~~a~~aaD~~i~~f~ 505 (804)
+.++.|. +|+..++.+.+..+ . .+++|||+.||..|++. +++||.|++... ...|++.+.+-.
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~ 367 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPS 367 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHH
Confidence 3455663 89999888876533 1 25899999999999996 588888864222 236788887755
Q ss_pred hHHHH
Q 003670 506 YLERL 510 (804)
Q Consensus 506 ~l~~l 510 (804)
.+..+
T Consensus 368 eV~~~ 372 (384)
T PLN02580 368 EVMEF 372 (384)
T ss_pred HHHHH
Confidence 44444
No 103
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.58 E-value=0.01 Score=62.09 Aligned_cols=41 Identities=29% Similarity=0.210 Sum_probs=36.6
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|+.+.++.|+++|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999888887777764
No 104
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.56 E-value=0.0095 Score=60.85 Aligned_cols=42 Identities=21% Similarity=0.178 Sum_probs=38.3
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
.++.+|+.+.++.|++.|+++.++||-....+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 379999999999999999999999999999998888888764
No 105
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.48 E-value=0.015 Score=61.40 Aligned_cols=40 Identities=28% Similarity=0.160 Sum_probs=34.5
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.+|+.++|+.|++.|+++.++||.....+..+-...++
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 5789999999999999999999999988877766666554
No 106
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.44 E-value=0.014 Score=63.89 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=37.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
.+.+|+.+.++.|+++|+++.++|+.....+..+-...||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47899999999999999999999999999999998888874
No 107
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.38 E-value=0.013 Score=56.50 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=31.3
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHhhHH
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAI 341 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~ 341 (804)
+|.+.+++.+++++++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 4788999999999999999999999999988774
No 108
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.35 E-value=0.094 Score=51.70 Aligned_cols=47 Identities=9% Similarity=0.150 Sum_probs=36.6
Q ss_pred ChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc-----ccCCCeEEEEe
Q 003670 314 GVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL-----LRPGMQQIIIN 360 (804)
Q Consensus 314 ~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl-----~~~~~~~i~i~ 360 (804)
.+.+.+..|+++|+.|+.+|.-........-+++|+ +.+|+..|.+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p 78 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLP 78 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEec
Confidence 467899999999999999999888888888888876 34455555443
No 109
>PLN03017 trehalose-phosphatase
Probab=96.35 E-value=0.097 Score=56.94 Aligned_cols=46 Identities=20% Similarity=0.178 Sum_probs=37.5
Q ss_pred cceEeEEEeeec--cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHH
Q 003670 298 DLVLLGATAVED--KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG 344 (804)
Q Consensus 298 dl~llG~~~i~D--~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia 344 (804)
|.||+-++.-.| .+-+++.++|++|+ .|++++++||+....+....
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 677776555444 37788999999999 78999999999999998873
No 110
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.34 E-value=0.016 Score=57.04 Aligned_cols=148 Identities=20% Similarity=0.278 Sum_probs=83.2
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEEEeccchhhhHhhhhchhHHHHHHhhhhHHHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQIIINLETPEILALEKTGAKSEITKASKESVLHQ 389 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 389 (804)
++-||+.++.+.|++. ...++++---..-+..+|.-+|+-..+..-...+.++.... .+. .+.+...
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P---eee---------R~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP---EEE---------REELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC---hHH---------HHHHHHh
Confidence 4779999999999876 44445555566678888888887443322211222111100 000 0111111
Q ss_pred hhhcccccccCCCCCCCeEEEEechhhhHhhhHHHHHHHHHHHhcCCceEEEcCChh---------------hHHHHHHH
Q 003670 390 INEGKNQLSASGGSSEAFALIIDGKSLTYALEDDIKNKFLELAIGCASVICCRSSPR---------------QKALVTRL 454 (804)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~~~~~~~~vi~~r~sP~---------------qK~~iv~~ 454 (804)
+ ...-.++|..|-.-+++ +|.|.+|. .|+.+++-
T Consensus 150 ~---------------~~~~~~~geelfe~lDe----------------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~ 198 (315)
T COG4030 150 I---------------DVIASLSGEELFEKLDE----------------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEG 198 (315)
T ss_pred c---------------CccccccHHHHHHHHHH----------------HHhhcCHHHHHHHHHhhhhccCcchhHHHHH
Confidence 1 01124556555433332 23333333 45666655
Q ss_pred HHcc--CCCeEEEecCCcCChhhhhhc----CcceeecCcchhhhhcccchhcch
Q 003670 455 VKSG--TGKTTLAIGDGANDVGMLQEA----DIGIGISGVEGMQAVMSSDIAIAQ 503 (804)
Q Consensus 455 lk~~--~~~~vlaiGDG~ND~~ml~~A----dvGI~i~g~~~~~a~~aaD~~i~~ 503 (804)
+-+- .....+.+||++.|+.|++++ ++.|+..|++- |..-||+++..
T Consensus 199 ~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 199 YCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred HHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 5442 223468899999999999987 35566777766 88889988765
No 111
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.31 E-value=0.014 Score=58.45 Aligned_cols=44 Identities=20% Similarity=0.133 Sum_probs=38.9
Q ss_pred eeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 307 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 307 i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
..+++.++++++++.|++.|+++.++||.....+..+...+|+.
T Consensus 103 ~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 103 IEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred hccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 34567788899999999999999999999999999999888873
No 112
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.15 E-value=0.0091 Score=61.41 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=35.3
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCC----CHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGD----KMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD----~~~ta~~ia~~~gl~ 350 (804)
.+.+++.+.++.++++|+++.++|+. ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34555999999999999999999998 667888988888883
No 113
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.10 E-value=0.026 Score=57.57 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=35.4
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.+|+.++++.|+++|++++++|+-....+......+|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999888777777777776
No 114
>PRK06769 hypothetical protein; Validated
Probab=96.08 E-value=0.037 Score=54.23 Aligned_cols=40 Identities=25% Similarity=0.231 Sum_probs=30.5
Q ss_pred cceEeEEEeeec----cccCChHHHHHHHHhcCCeEEEEcCCCH
Q 003670 298 DLVLLGATAVED----KLQNGVPDCIDKLAQAGIKIWVLTGDKM 337 (804)
Q Consensus 298 dl~llG~~~i~D----~lr~~v~~~I~~L~~aGIkv~~lTGD~~ 337 (804)
|.++.|-..+.+ ++.+|++++++.|++.|+++.++|+...
T Consensus 12 d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 12 DGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 555555433332 2689999999999999999999998653
No 115
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.06 E-value=0.026 Score=64.61 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=38.0
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.||+.+.++.|++.|+++.++|+-....+..+...+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999998888873
No 116
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.97 E-value=0.023 Score=52.83 Aligned_cols=41 Identities=22% Similarity=0.257 Sum_probs=34.7
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCC--------HhhHHHHHHHcCc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDK--------METAINIGFACSL 349 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~--------~~ta~~ia~~~gl 349 (804)
-++.+++.++++.|+++|++++++|+.. .+.+..+...+++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3578999999999999999999999988 6666667766665
No 117
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.95 E-value=0.037 Score=58.99 Aligned_cols=38 Identities=26% Similarity=0.270 Sum_probs=32.0
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 347 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 347 (804)
++.||+.+.++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 58899999999999999999999998777766554433
No 118
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.83 E-value=0.061 Score=53.11 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=35.4
Q ss_pred CCCeEEEecCCcCChhhhhhcCcce-eec-Ccch-hhhhccc--chhcchHhhHHHHH
Q 003670 459 TGKTTLAIGDGANDVGMLQEADIGI-GIS-GVEG-MQAVMSS--DIAIAQFRYLERLL 511 (804)
Q Consensus 459 ~~~~vlaiGDG~ND~~ml~~AdvGI-~i~-g~~~-~~a~~aa--D~~i~~f~~l~~ll 511 (804)
....+++|||+.+|+.+-+.|++.+ ++. |... ......+ |+++.++..+..++
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHH
Confidence 4578999999999999999999854 332 2211 1112235 88888877766553
No 119
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.75 E-value=0.026 Score=58.04 Aligned_cols=40 Identities=15% Similarity=0.170 Sum_probs=34.6
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCC----HhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDK----METAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~----~~ta~~ia~~~gl 349 (804)
.+.+|+.+.|+.|++.|+++.++||+. ..|+.++.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 477889999999999999999999974 5588888877777
No 120
>PRK09449 dUMP phosphatase; Provisional
Probab=95.68 E-value=0.063 Score=54.92 Aligned_cols=39 Identities=15% Similarity=0.081 Sum_probs=32.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999887777766666665
No 121
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.67 E-value=0.039 Score=55.29 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=36.0
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.+++.++++.|+++|+++.++|+-+...+..+...+|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888888888777776
No 122
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.58 E-value=0.041 Score=57.40 Aligned_cols=41 Identities=22% Similarity=0.082 Sum_probs=37.4
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|+.++++.|++.|+++.++|+-....+..+-...|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999999998888888874
No 123
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.58 E-value=0.024 Score=60.99 Aligned_cols=45 Identities=20% Similarity=0.084 Sum_probs=40.4
Q ss_pred eeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 306 AVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 306 ~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
...+++.+++.++|+.|++.|++++++||....++..+...+++.
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 356789999999999999999999999999999999888887763
No 124
>PLN02940 riboflavin kinase
Probab=95.44 E-value=0.043 Score=61.04 Aligned_cols=40 Identities=13% Similarity=0.037 Sum_probs=33.1
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHH-HcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGF-ACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~-~~gl 349 (804)
++.+|+.++++.|++.|+++.|+|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 477999999999999999999999998877665544 4454
No 125
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.43 E-value=0.055 Score=51.73 Aligned_cols=38 Identities=16% Similarity=0.263 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCccee
Q 003670 446 RQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIG 484 (804)
Q Consensus 446 ~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~ 484 (804)
.+|..+|+.+++ +.+.+.++|||..|+++-+.+|+=.|
T Consensus 146 ~dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhc-CCceEEEecCCcccccHhhhhhhHhh
Confidence 368999999998 78889999999999987777776554
No 126
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.42 E-value=0.031 Score=54.17 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=39.4
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
..++.+++.+.++.|++.|++++++|+-............|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4578999999999999999999999999999999999988875
No 127
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.41 E-value=0.034 Score=54.90 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=30.2
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.||+.++|+.|+++|+++.++|+... +..+.+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997532 3445555555
No 128
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.38 E-value=0.078 Score=54.35 Aligned_cols=41 Identities=15% Similarity=0.052 Sum_probs=35.4
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|+.+.++.|+++|+++.++|+-..+.+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998888777766666663
No 129
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.23 E-value=0.07 Score=52.38 Aligned_cols=39 Identities=23% Similarity=0.227 Sum_probs=32.4
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.+|+.++++.|+++|++++++|+-.... ..+..++|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l 123 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGL 123 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCC
Confidence 588999999999999999999999987776 444444665
No 130
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.14 E-value=0.091 Score=51.33 Aligned_cols=51 Identities=20% Similarity=0.180 Sum_probs=41.1
Q ss_pred eEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCC-CHhhHHHHHHHcCcc
Q 003670 300 VLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGD-KMETAINIGFACSLL 350 (804)
Q Consensus 300 ~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD-~~~ta~~ia~~~gl~ 350 (804)
......+-+-++.+|+.++++.|+++|+++.++|+- ....+..+-...++-
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344444555678999999999999999999999975 888888887777763
No 131
>PLN02811 hydrolase
Probab=95.13 E-value=0.085 Score=53.88 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=27.0
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETA 340 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta 340 (804)
++.+|+.++|+.|++.|+++.++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5789999999999999999999998765433
No 132
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.11 E-value=0.048 Score=53.78 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=32.6
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
-++.+|+.++++.|+++|+++.++|+. ..+..+.+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 368999999999999999999999987 556666666665
No 133
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=94.81 E-value=0.12 Score=52.70 Aligned_cols=40 Identities=20% Similarity=0.305 Sum_probs=35.4
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++.+|+.+.++.|++. +++.++|+-....+..+..+.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999998888888888777773
No 134
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.64 E-value=0.1 Score=49.72 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=33.2
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 347 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 347 (804)
+.+..+|+.+.++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4445689999999999999999999999888777665543
No 135
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.06 E-value=0.15 Score=49.79 Aligned_cols=40 Identities=20% Similarity=0.309 Sum_probs=32.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCC-HhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDK-METAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~-~~ta~~ia~~~gl 349 (804)
++.++++++++.|++.|+++.++|+-. ...+..+.+.+++
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 4555566665554
No 136
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.94 E-value=0.25 Score=48.50 Aligned_cols=49 Identities=16% Similarity=0.138 Sum_probs=33.2
Q ss_pred CCCeEEEecCCcCChhhhhhcCcce--ee-cCcchh-hhhcccchhcchHhhH
Q 003670 459 TGKTTLAIGDGANDVGMLQEADIGI--GI-SGVEGM-QAVMSSDIAIAQFRYL 507 (804)
Q Consensus 459 ~~~~vlaiGDG~ND~~ml~~AdvGI--~i-~g~~~~-~a~~aaD~~i~~f~~l 507 (804)
....++||||..+|+.+=+.|++.. ++ .|.... .....+|+++.++..|
T Consensus 122 ~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 122 DMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred ChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 4467899999999999999999953 44 232211 1123488888776544
No 137
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.93 E-value=0.19 Score=50.41 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=30.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.+|+.++++.|+++|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57899999999999999999999985543 3455555555
No 138
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.81 E-value=0.17 Score=48.83 Aligned_cols=26 Identities=31% Similarity=0.496 Sum_probs=23.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCC
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGD 335 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD 335 (804)
++-+|+.++|+.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999974
No 139
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.57 E-value=0.33 Score=50.79 Aligned_cols=42 Identities=14% Similarity=0.206 Sum_probs=31.8
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHhhH---HHHHHHcCc
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETA---INIGFACSL 349 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta---~~ia~~~gl 349 (804)
..++-+|+.+.++.|++.|+++.++|++..... ...-+..|+
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi 160 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGF 160 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCc
Confidence 345789999999999999999999999874433 233344554
No 140
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.32 E-value=0.095 Score=49.91 Aligned_cols=42 Identities=17% Similarity=0.025 Sum_probs=36.7
Q ss_pred eeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 307 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 307 i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
..-+++||+.+.++.|+ .++++.|.|+-....+..+...+++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 33468999999999999 5799999999999999998887776
No 141
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.10 E-value=0.17 Score=47.99 Aligned_cols=27 Identities=26% Similarity=0.383 Sum_probs=24.9
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCC
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDK 336 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~ 336 (804)
++.+|+.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999865
No 142
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=93.07 E-value=0.3 Score=45.16 Aligned_cols=39 Identities=10% Similarity=0.067 Sum_probs=32.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCC-CHhhHHHHHHHcC
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGD-KMETAINIGFACS 348 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD-~~~ta~~ia~~~g 348 (804)
++.+|+.++++.|+++|+++.++|+- ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6766666555444
No 143
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=92.32 E-value=0.44 Score=48.57 Aligned_cols=38 Identities=5% Similarity=0.055 Sum_probs=30.4
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
-++.+|++++++.| ++++.++|+.....+...-...|+
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l 124 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGM 124 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcCh
Confidence 34678999999998 499999999887777766666665
No 144
>PLN02151 trehalose-phosphatase
Probab=92.20 E-value=3.2 Score=45.20 Aligned_cols=62 Identities=15% Similarity=0.182 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHccCC------CeEEEecCCcCChhhhhhc-----CcceeecCcchhhhhcccchhcchHhhHHHH
Q 003670 446 RQKALVTRLVKSGTG------KTTLAIGDGANDVGMLQEA-----DIGIGISGVEGMQAVMSSDIAIAQFRYLERL 510 (804)
Q Consensus 446 ~qK~~iv~~lk~~~~------~~vlaiGDG~ND~~ml~~A-----dvGI~i~g~~~~~a~~aaD~~i~~f~~l~~l 510 (804)
-+|+..++.+.+..+ ..++++||-..|-.|++.. ++||-++... ....|++.+.+-..+..+
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~---k~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYA---KETNASYSLQEPDEVMEF 340 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCC---CCCcceEeCCCHHHHHHH
Confidence 389999988876422 2589999999999999854 5555553111 123688888875544444
No 145
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.17 E-value=0.27 Score=49.65 Aligned_cols=28 Identities=25% Similarity=0.285 Sum_probs=25.2
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKM 337 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~ 337 (804)
++.+++.++++.|+++|++++++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5789999999999999999999998654
No 146
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=92.08 E-value=0.37 Score=52.63 Aligned_cols=26 Identities=31% Similarity=0.397 Sum_probs=24.3
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcC
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTG 334 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTG 334 (804)
-++.|++.++++.|+++|+++.|+|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 35889999999999999999999998
No 147
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.01 E-value=0.6 Score=47.60 Aligned_cols=39 Identities=15% Similarity=0.197 Sum_probs=32.1
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHH
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA 346 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~ 346 (804)
+-++.+|+.++++.|+++|+++.|+|.........+-..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 346999999999999999999999999877665555433
No 148
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=91.14 E-value=0.86 Score=44.26 Aligned_cols=27 Identities=26% Similarity=0.417 Sum_probs=23.6
Q ss_pred ccCChHHHHHHHHhcCCeEEEEcCCCH
Q 003670 311 LQNGVPDCIDKLAQAGIKIWVLTGDKM 337 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGIkv~~lTGD~~ 337 (804)
+-+|+.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
No 149
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=90.84 E-value=1.1 Score=42.79 Aligned_cols=33 Identities=30% Similarity=0.356 Sum_probs=29.9
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHH
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAI 341 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~ 341 (804)
|..++|+.+..+.+++.|++++.||++..-.|.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQAN 58 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHH
Confidence 799999999999999999999999999865543
No 150
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=90.52 E-value=0.5 Score=51.26 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=32.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFA 346 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~ 346 (804)
++.++++++|+.|++.|+++.++|.-....|..+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999988888887765
No 151
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=90.44 E-value=1.1 Score=56.65 Aligned_cols=41 Identities=17% Similarity=0.028 Sum_probs=36.4
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
.+.+|+.+.++.|+++|+++.++|+-....+..+-...|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46899999999999999999999999888888887777763
No 152
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=90.17 E-value=0.43 Score=49.28 Aligned_cols=68 Identities=18% Similarity=0.189 Sum_probs=33.5
Q ss_pred CCceEEEcCChhhHHHHHHHHHccCC------CeEEEecCCcCChhhhhhc------CcceeecCcchhhhhcccchhcc
Q 003670 435 CASVICCRSSPRQKALVTRLVKSGTG------KTTLAIGDGANDVGMLQEA------DIGIGISGVEGMQAVMSSDIAIA 502 (804)
Q Consensus 435 ~~~vi~~r~sP~qK~~iv~~lk~~~~------~~vlaiGDG~ND~~ml~~A------dvGI~i~g~~~~~a~~aaD~~i~ 502 (804)
.+.+|=.|..-..|+..++.+-+..+ ..++++||...|-.|++.. ++||-+...+......+|++-+.
T Consensus 153 g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 153 GKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp -SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred CCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 34455566555569999998877543 4799999999999999874 34555533332222345555443
No 153
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=89.90 E-value=1.2 Score=45.38 Aligned_cols=30 Identities=27% Similarity=0.291 Sum_probs=27.2
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhh
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMET 339 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~t 339 (804)
+.-+++.++++.|++.|++|+++||+....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 577899999999999999999999998654
No 154
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=89.77 E-value=1.5 Score=45.36 Aligned_cols=47 Identities=9% Similarity=0.136 Sum_probs=35.9
Q ss_pred EEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHH--HHHHHcCc
Q 003670 303 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAI--NIGFACSL 349 (804)
Q Consensus 303 G~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~--~ia~~~gl 349 (804)
|.+.-.+++-||++++++.|+++|+++.++|.-....+. ....++|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 555566788999999999999999999999995544333 34455665
No 155
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=89.42 E-value=2.3 Score=40.58 Aligned_cols=39 Identities=18% Similarity=0.246 Sum_probs=34.1
Q ss_pred ccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 311 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
.-|++.+=++.++++|+++.++|.-+..-+..++..+|+
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 567777788899999999999999888888888888886
No 156
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=88.65 E-value=2.2 Score=43.71 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=34.6
Q ss_pred cccCChHHHHHHH--HhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKL--AQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L--~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
|+.++.+++++.+ ++.|+.+.|+|--+...-..+-+.-|+-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 4789999999999 5689999999988888777777777763
No 157
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=88.07 E-value=3.5 Score=41.07 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=32.0
Q ss_pred cccCChHHHHHHHHhcCC-eEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGI-KIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGI-kv~~lTGD~~~ta~~ia~~~gl 349 (804)
|+-||..++|+.+++.|- .++++|--|.-....+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 577999999999999996 8888887777666666666655
No 158
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=88.03 E-value=4 Score=46.84 Aligned_cols=93 Identities=14% Similarity=0.181 Sum_probs=58.4
Q ss_pred hhhHHHHHHHHHccCCCeEEEecCCcCChhhhhhcCcceeecCcchhhhhcccchhcchHhhHHHHHHHhhccchhhhhH
Q 003670 445 PRQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISS 524 (804)
Q Consensus 445 P~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~aaD~~i~~f~~l~~lll~~Gr~~~~~i~~ 524 (804)
-++|..-++.... ......+.||+.||.+||+.||-+..+..... =.+...++..++++..||..++-.-.
T Consensus 174 Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~--------~~~~~~~~~~~~~fhdgrl~~~p~~~ 244 (497)
T PLN02177 174 GDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPRTKC--------EPLPRNKLLSPVIFHEGRLVQRPTPL 244 (497)
T ss_pred cHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCCCCC--------CcCCcccCCCceeeeCCcccCCCCHH
Confidence 4567666653322 12223799999999999999999999854221 11445577788878889998866554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 003670 525 MICYFFYKNITFGLSVFLYEAYT 547 (804)
Q Consensus 525 ~i~~~~~~ni~~~~~~~~~~~~~ 547 (804)
..+..+.. +-+++++.+.-++.
T Consensus 245 ~~l~~~~~-~p~g~~l~~~r~~~ 266 (497)
T PLN02177 245 VALLTFLW-MPIGFILSLLRVYL 266 (497)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHH
Confidence 44443333 34455555554443
No 159
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=87.67 E-value=1.2 Score=44.68 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=26.3
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhh
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMET 339 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~t 339 (804)
++.+|+.++++.|+++|+++.++|+-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999866443
No 160
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=86.20 E-value=0.67 Score=40.88 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=35.7
Q ss_pred EEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHH---HHcCc
Q 003670 303 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG---FACSL 349 (804)
Q Consensus 303 G~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia---~~~gl 349 (804)
|++...+++=||+.++|+.|+++|++++++|.....+...++ ..+|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 556667889999999999999999999999998866655555 44565
No 161
>PHA02597 30.2 hypothetical protein; Provisional
Probab=85.96 E-value=2.5 Score=42.12 Aligned_cols=23 Identities=17% Similarity=0.300 Sum_probs=20.5
Q ss_pred CeEEEecCCcCChhhhhhc--Ccce
Q 003670 461 KTTLAIGDGANDVGMLQEA--DIGI 483 (804)
Q Consensus 461 ~~vlaiGDG~ND~~ml~~A--dvGI 483 (804)
..+++|||..+|+.+-++| |+-.
T Consensus 146 ~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 146 RVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred CcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 4688999999999999999 9865
No 162
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=84.41 E-value=4.5 Score=39.59 Aligned_cols=46 Identities=17% Similarity=0.359 Sum_probs=33.1
Q ss_pred ceEEEcCChhh--------HHHHHHHHHcc--CCCeEEEecCCcCChhhhhhcCcc
Q 003670 437 SVICCRSSPRQ--------KALVTRLVKSG--TGKTTLAIGDGANDVGMLQEADIG 482 (804)
Q Consensus 437 ~vi~~r~sP~q--------K~~iv~~lk~~--~~~~vlaiGDG~ND~~ml~~AdvG 482 (804)
.+.+|.-.|++ ...+.+.++++ .-....+|||-..|+.+-..|+++
T Consensus 89 ~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 89 GILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred eEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 34555555553 45666777663 236789999999999998888887
No 163
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=80.93 E-value=2.5 Score=44.23 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=36.8
Q ss_pred EEEeeecc----ccCChHHHHHHHHhcCCeEEEEcCCCHhh---HHHHHHHcCc
Q 003670 303 GATAVEDK----LQNGVPDCIDKLAQAGIKIWVLTGDKMET---AINIGFACSL 349 (804)
Q Consensus 303 G~~~i~D~----lr~~v~~~I~~L~~aGIkv~~lTGD~~~t---a~~ia~~~gl 349 (804)
|++.-.+. +-+++.++|+.|+++|++++++||+...+ ......++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 45545555 88899999999999999999999987776 4444555675
No 164
>PRK10444 UMP phosphatase; Provisional
Probab=80.44 E-value=2 Score=44.68 Aligned_cols=45 Identities=13% Similarity=0.268 Sum_probs=40.1
Q ss_pred EEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc
Q 003670 303 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 347 (804)
Q Consensus 303 G~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 347 (804)
|++.-.+.+-+++.++|+.|+++|++++++||+...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999999888887775
No 165
>PLN02645 phosphoglycolate phosphatase
Probab=79.79 E-value=2.4 Score=45.72 Aligned_cols=47 Identities=30% Similarity=0.441 Sum_probs=40.0
Q ss_pred EEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHH---HHcCc
Q 003670 303 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIG---FACSL 349 (804)
Q Consensus 303 G~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia---~~~gl 349 (804)
|++--.+.+-+++.++|+.|++.|++++++|+....+...++ ..+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 666666788899999999999999999999999977777776 55676
No 166
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=79.73 E-value=4.8 Score=39.50 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=31.1
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.+|+.++++.|+ .+++++|+-....+..+....|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl 120 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGI 120 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCc
Confidence 36789999999997 47999999888888888888776
No 167
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=79.68 E-value=38 Score=35.46 Aligned_cols=47 Identities=13% Similarity=0.138 Sum_probs=38.6
Q ss_pred cCCceEEEcCChhhHHHHHHHHHccCC---CeEEEecCCcCChhhhhhcC
Q 003670 434 GCASVICCRSSPRQKALVTRLVKSGTG---KTTLAIGDGANDVGMLQEAD 480 (804)
Q Consensus 434 ~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~Ad 480 (804)
..+.+|-+|.+-..|+..++.+.+... ..+++.||-.-|-.|++..+
T Consensus 169 ~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 169 PGKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred eCceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 346678899888889999997776533 35899999999999999887
No 168
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.70 E-value=5.2 Score=39.28 Aligned_cols=37 Identities=14% Similarity=-0.066 Sum_probs=30.5
Q ss_pred cCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 312 QNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 312 r~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
-++ .++++.|++. +++.++||.....+..+-...|+.
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 343 6899999875 899999999999998888888873
No 169
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=78.30 E-value=3 Score=43.90 Aligned_cols=41 Identities=12% Similarity=0.158 Sum_probs=37.6
Q ss_pred cc-CChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCccc
Q 003670 311 LQ-NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 351 (804)
Q Consensus 311 lr-~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 351 (804)
+| |++.++++.|+++|+++.++|+-..+.+...-.++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999853
No 170
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=77.62 E-value=4.7 Score=41.96 Aligned_cols=48 Identities=10% Similarity=0.090 Sum_probs=39.6
Q ss_pred EEEeeeccccCChHHHHHHHHhcCCeEEEEcC---CCHhhHHHHHHHcCcc
Q 003670 303 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTG---DKMETAINIGFACSLL 350 (804)
Q Consensus 303 G~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTG---D~~~ta~~ia~~~gl~ 350 (804)
|++.-.+.+-+++.++|++|+++|++++++|| +..+......+++|+-
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445566778999999999999999999996 7788888888888873
No 171
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=75.95 E-value=9.6 Score=36.93 Aligned_cols=44 Identities=16% Similarity=0.209 Sum_probs=35.2
Q ss_pred eeeccccCChHHHHHHHHhcCCe--EEEEcCC-------CHhhHHHHHHHcCc
Q 003670 306 AVEDKLQNGVPDCIDKLAQAGIK--IWVLTGD-------KMETAINIGFACSL 349 (804)
Q Consensus 306 ~i~D~lr~~v~~~I~~L~~aGIk--v~~lTGD-------~~~ta~~ia~~~gl 349 (804)
-=++++.++..+.+++|++.+.. |+++|.- ..+.|..+.+.+|+
T Consensus 55 ~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 55 PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 34577889999999999999874 9999875 36777777777775
No 172
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=75.16 E-value=14 Score=37.68 Aligned_cols=43 Identities=23% Similarity=0.220 Sum_probs=38.7
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCccc
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLR 351 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~ 351 (804)
.++.+|+.+.++.|++.|+++.+.|+-....+..+....|+..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~ 127 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD 127 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh
Confidence 4689999999999999999999999999888888888888753
No 173
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=74.83 E-value=6.1 Score=40.55 Aligned_cols=30 Identities=17% Similarity=0.299 Sum_probs=26.7
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHh
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKME 338 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 338 (804)
++.-|++.+.++.+++.|++|..+||++..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 456688999999999999999999999854
No 174
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=74.07 E-value=13 Score=36.74 Aligned_cols=49 Identities=22% Similarity=0.295 Sum_probs=42.3
Q ss_pred ceEeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc
Q 003670 299 LVLLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 347 (804)
Q Consensus 299 l~llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 347 (804)
+.+-|.+.+||-.-|++.++++.|++++.+|..+|.-+.+.-..+..++
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 4567999999999999999999999999999999988877766665543
No 175
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=73.05 E-value=5.1 Score=42.32 Aligned_cols=40 Identities=18% Similarity=0.148 Sum_probs=36.1
Q ss_pred cc-CChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 311 LQ-NGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 311 lr-~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
+| |++.+++++|+++|+++.++|+...+.+..+....|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 45 89999999999999999999988888888899999984
No 176
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=72.17 E-value=65 Score=32.39 Aligned_cols=23 Identities=13% Similarity=0.374 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC
Q 003670 675 HIFIWGSIALWYLFMLAYGAITP 697 (804)
Q Consensus 675 ~~~i~~si~~~~i~~~i~~~~~~ 697 (804)
....++.+++|+++..+...+|+
T Consensus 150 ~~~~~~~~~~w~~~~~~~~~lp~ 172 (206)
T PF06570_consen 150 ILISVLAMVLWIVIFVLTSFLPP 172 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 33455677777777666666665
No 177
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=71.11 E-value=3.5 Score=37.90 Aligned_cols=33 Identities=15% Similarity=0.082 Sum_probs=28.7
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHH
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAI 341 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~ 341 (804)
+++.+++.++++.++++|++++++||+......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 557788999999999999999999999987654
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=69.80 E-value=12 Score=39.16 Aligned_cols=53 Identities=19% Similarity=0.285 Sum_probs=34.3
Q ss_pred CCCeEEEecCCc-CChhhhhhcCcce-ee-cCcch----hhhhcccchhcchHhhHHHHH
Q 003670 459 TGKTTLAIGDGA-NDVGMLQEADIGI-GI-SGVEG----MQAVMSSDIAIAQFRYLERLL 511 (804)
Q Consensus 459 ~~~~vlaiGDG~-ND~~ml~~AdvGI-~i-~g~~~----~~a~~aaD~~i~~f~~l~~ll 511 (804)
..+.++||||.. +|+.+=+.+++-. .+ .|... ......+|+++.++..+..++
T Consensus 195 ~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 195 EPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred ChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 457899999996 8999988888744 44 23211 111234677877766665543
No 179
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=67.53 E-value=1.8 Score=44.40 Aligned_cols=45 Identities=9% Similarity=0.214 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHccChHHHHHHHHHH
Q 003670 671 TLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVV 725 (804)
Q Consensus 671 ~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~v~ 725 (804)
+||+..+++..+++.+++++|..+ +...+|. .+.-.||+++++.+
T Consensus 135 s~WtiLaFcLAF~LaivlLIIAv~----L~qaWfT------~L~dL~WL~LFlai 179 (381)
T PF05297_consen 135 SFWTILAFCLAFLLAIVLLIIAVL----LHQAWFT------ILVDLYWLLLFLAI 179 (381)
T ss_dssp -------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH------HHHHHHHHHHHHHH
Confidence 455555555544444444443332 2222221 23455888765543
No 180
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=65.67 E-value=1.1e+02 Score=38.38 Aligned_cols=43 Identities=21% Similarity=0.221 Sum_probs=36.0
Q ss_pred HccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHH
Q 003670 711 LAPAPLFWLVTLFVVISTLIPYFAYSAIQMRFFPMYHGMIQWIR 754 (804)
Q Consensus 711 ~~~~~~~wl~~l~v~~~~ll~~~i~k~i~r~~~P~~~~ii~e~~ 754 (804)
...++.+|..++++.++++++.++....++.|.|.+.. ++++.
T Consensus 850 ~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~-~~~~~ 892 (917)
T COG0474 850 LFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLS-LFEWL 892 (917)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCc-HHHHH
Confidence 35789999999999999999999988888888888888 55543
No 181
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=64.98 E-value=5 Score=38.74 Aligned_cols=43 Identities=12% Similarity=0.005 Sum_probs=37.5
Q ss_pred eeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 306 AVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 306 ~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
.+.=+.|||+.+.++.|.+. ..++|.|.-....|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 34446999999999999987 99999999999999999887764
No 182
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=63.92 E-value=29 Score=35.05 Aligned_cols=40 Identities=15% Similarity=0.052 Sum_probs=32.8
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
++-+++.++++.++.. .+++++|--....+.....++||.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~ 138 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL 138 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh
Confidence 5677888888888888 889999987777788888888853
No 183
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=63.43 E-value=2e+02 Score=35.54 Aligned_cols=44 Identities=11% Similarity=0.023 Sum_probs=32.5
Q ss_pred ccCChHHHHHHHHhc-CCeEEEEcCCCHhhHHHHHHHcC--cccCCC
Q 003670 311 LQNGVPDCIDKLAQA-GIKIWVLTGDKMETAINIGFACS--LLRPGM 354 (804)
Q Consensus 311 lr~~v~~~I~~L~~a-GIkv~~lTGD~~~ta~~ia~~~g--l~~~~~ 354 (804)
+-+++.++++.|.+. +..|+|+||+..++.......++ +...++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG 579 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENG 579 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCC
Confidence 455777888888765 68999999999999888875533 444433
No 184
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=63.29 E-value=25 Score=40.78 Aligned_cols=27 Identities=22% Similarity=0.436 Sum_probs=24.0
Q ss_pred ccCChHHHHHHHHhcCCeEEEEcCCCH
Q 003670 311 LQNGVPDCIDKLAQAGIKIWVLTGDKM 337 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGIkv~~lTGD~~ 337 (804)
+-++++++|+.|+++|++++|+|.-..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 469999999999999999999998543
No 185
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=61.60 E-value=19 Score=37.12 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=22.7
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCH
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKM 337 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~ 337 (804)
++-+|++++++.|++. +++.++|.-+.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~ 139 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNA 139 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCc
Confidence 4678999999999975 89999998554
No 186
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=61.38 E-value=34 Score=35.83 Aligned_cols=31 Identities=26% Similarity=0.287 Sum_probs=26.8
Q ss_pred eccccCChHHHHHHHHhcCCeEEEEcCCCHh
Q 003670 308 EDKLQNGVPDCIDKLAQAGIKIWVLTGDKME 338 (804)
Q Consensus 308 ~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 338 (804)
+.|.-+++.+..+.+++.|++|+++||+...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 3456679999999999999999999999854
No 187
>PTZ00445 p36-lilke protein; Provisional
Probab=61.23 E-value=13 Score=37.20 Aligned_cols=29 Identities=24% Similarity=0.140 Sum_probs=24.4
Q ss_pred ccCChHHHHHHHHhcCCeEEEEcCCCHhh
Q 003670 311 LQNGVPDCIDKLAQAGIKIWVLTGDKMET 339 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGIkv~~lTGD~~~t 339 (804)
++|+.+.-++.|+++||+|.|+|=-..++
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 68888999999999999999999554443
No 188
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=60.90 E-value=17 Score=38.53 Aligned_cols=49 Identities=18% Similarity=0.285 Sum_probs=36.1
Q ss_pred EEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHH---HHHHcCccc
Q 003670 303 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAIN---IGFACSLLR 351 (804)
Q Consensus 303 G~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~---ia~~~gl~~ 351 (804)
|++.-.+++-+++.++|+.|+++|++++++||....+... --+.+|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 4444467778889999999999999999999976443333 335567643
No 189
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=59.78 E-value=1.7e+02 Score=28.61 Aligned_cols=34 Identities=18% Similarity=0.083 Sum_probs=26.0
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 003670 668 SYFTLIQHIFIWGSIALWYLFMLAYGAITPTHST 701 (804)
Q Consensus 668 ~~~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~ 701 (804)
+.|+|-...+..+|+++|+++.++-.++|+.++.
T Consensus 158 r~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~ 191 (226)
T COG4858 158 RPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNP 191 (226)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCc
Confidence 3466666677889999999998888888875443
No 190
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=54.14 E-value=22 Score=34.36 Aligned_cols=33 Identities=6% Similarity=0.001 Sum_probs=24.1
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl 349 (804)
++.+|+.++++ ++.++|.-.......+....|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 47899999998 3677887777666666666665
No 191
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=51.54 E-value=64 Score=28.33 Aligned_cols=63 Identities=14% Similarity=0.260 Sum_probs=37.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003670 670 FTLIQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVVISTLIPYFAYSAIQM 740 (804)
Q Consensus 670 ~~~~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i~k~i~r 740 (804)
-+.+....+.+++...++.-++...+.. ..+...+++...|.+++++..+++...-++.++.|
T Consensus 36 ~~~~~~l~~~g~IG~~~v~pil~G~~lG--------~WLD~~~~t~~~~tl~~lllGv~~G~~n~w~wi~r 98 (100)
T TIGR02230 36 RSIWEGLGMFGLIGWSVAIPTLLGVAVG--------IWLDRHYPSPFSWTLTMLIVGVVIGCLNAWHWVSR 98 (100)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456666666666666555444433221 13344555555777777777777777777777765
No 192
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=51.44 E-value=4.6e+02 Score=32.90 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=30.1
Q ss_pred ccCChHHHHHHHHhc-CCeEEEEcCCCHhhHHHHHHHcC
Q 003670 311 LQNGVPDCIDKLAQA-GIKIWVLTGDKMETAINIGFACS 348 (804)
Q Consensus 311 lr~~v~~~I~~L~~a-GIkv~~lTGD~~~ta~~ia~~~g 348 (804)
+-+++.++++.|.+. +..|+|+||+..++.......++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 336677888888765 67999999999999888876644
No 193
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=50.88 E-value=20 Score=37.64 Aligned_cols=47 Identities=17% Similarity=0.224 Sum_probs=40.1
Q ss_pred EeEEEeeeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc
Q 003670 301 LLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC 347 (804)
Q Consensus 301 llG~~~i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~ 347 (804)
+=|++.--+.+=|++.++|+.|+++|++++.+|.-...+...++.++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34777788899999999999999999999999999888887555443
No 194
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=47.60 E-value=61 Score=29.42 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=57.1
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
-+...|++|+.++.. .+.++.. ....+.+-.++++-+......+.+++.++.|++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~------------------------~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIV------------------------EAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHH------------------------HHHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 467899999998864 3433321 123356788888888888889999999999999
Q ss_pred cCC-e-EEEEcCCCHhhHHHHHHHcCc
Q 003670 325 AGI-K-IWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 325 aGI-k-v~~lTGD~~~ta~~ia~~~gl 349 (804)
+|. + .+++-|..+.--..-..+.|+
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 977 3 456666655544566668886
No 195
>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes. ; GO: 0016021 integral to membrane
Probab=42.74 E-value=2.4e+02 Score=34.04 Aligned_cols=15 Identities=20% Similarity=0.640 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHH
Q 003670 649 ATMYTCIVWVVNLQL 663 (804)
Q Consensus 649 t~~ft~~v~~~n~~~ 663 (804)
++.|+|+.++..+..
T Consensus 76 ~~~~~~~~~~~d~~~ 90 (697)
T PF09726_consen 76 SVFFVCIAFTSDLIC 90 (697)
T ss_pred HHHHHHHHHHHHHHH
Confidence 456666666554443
No 196
>PRK10444 UMP phosphatase; Provisional
Probab=41.20 E-value=1.3e+02 Score=31.10 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=21.6
Q ss_pred CCCeEEEecCCc-CChhhhhhcCcce
Q 003670 459 TGKTTLAIGDGA-NDVGMLQEADIGI 483 (804)
Q Consensus 459 ~~~~vlaiGDG~-ND~~ml~~AdvGI 483 (804)
..+.++||||.. +|+.+=+.|++-.
T Consensus 190 ~~~~~v~IGD~~~tDi~~A~~~G~~~ 215 (248)
T PRK10444 190 HSEETVIVGDNLRTDILAGFQAGLET 215 (248)
T ss_pred CcccEEEECCCcHHHHHHHHHcCCCE
Confidence 467899999997 8999999998865
No 197
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=40.96 E-value=2.1e+02 Score=36.11 Aligned_cols=65 Identities=15% Similarity=0.335 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhcCCceEEEc-----CChh--hHHHHHHHHHccC----CCeEEEecCCcC-C-hhhhhhcCcceeecC
Q 003670 423 DIKNKFLELAIGCASVICCR-----SSPR--QKALVTRLVKSGT----GKTTLAIGDGAN-D-VGMLQEADIGIGISG 487 (804)
Q Consensus 423 ~~~~~~~~~~~~~~~vi~~r-----~sP~--qK~~iv~~lk~~~----~~~vlaiGDG~N-D-~~ml~~AdvGI~i~g 487 (804)
+++..+......|+.+.++. +-|. .|.+.++.|..+. .+++..+||..| | ..|+.--+-+|-+.|
T Consensus 925 elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 925 ELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred HHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 56666666666777443322 4454 5999999998763 356677999999 9 557778888886655
No 198
>PTZ00413 lipoate synthase; Provisional
Probab=40.67 E-value=3e+02 Score=30.45 Aligned_cols=65 Identities=18% Similarity=0.239 Sum_probs=43.9
Q ss_pred HHHHHHHHHhhhccceEeEEEee-eccccCC----hHHHHHHHHhc--CCeEEEEcCCC--HhhHHHHHHHcCc
Q 003670 285 ETLIDEVTETIEKDLVLLGATAV-EDKLQNG----VPDCIDKLAQA--GIKIWVLTGDK--METAINIGFACSL 349 (804)
Q Consensus 285 ~~~~~~~~~~ie~dl~llG~~~i-~D~lr~~----v~~~I~~L~~a--GIkv~~lTGD~--~~ta~~ia~~~gl 349 (804)
++..+.....-+.++.+.=++.. .|+|.++ ..++|+.+++. ++.|.+++||- ...+...-.+.|+
T Consensus 180 eEp~~vA~av~~~Gl~~~VVTSv~RDDL~D~ga~~~a~~I~~Ir~~~p~~~IevligDf~g~~e~l~~L~eAG~ 253 (398)
T PTZ00413 180 NEPEKVAKAVAEMGVDYIVMTMVDRDDLPDGGASHVARCVELIKESNPELLLEALVGDFHGDLKSVEKLANSPL 253 (398)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEcCCCCChhhHHHHHHHHHHHHccCCCCeEEEcCCccccCHHHHHHHHhcCC
Confidence 33333333344567777777777 5777665 57889999884 79999999987 4445566666665
No 199
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=40.62 E-value=12 Score=36.58 Aligned_cols=31 Identities=32% Similarity=0.397 Sum_probs=25.3
Q ss_pred hHHHHHHHH-----HccCCCeEEEecCCcCChhhhh
Q 003670 447 QKALVTRLV-----KSGTGKTTLAIGDGANDVGMLQ 477 (804)
Q Consensus 447 qK~~iv~~l-----k~~~~~~vlaiGDG~ND~~ml~ 477 (804)
.|...++.+ +......++++|||.||++|||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 488888888 1126789999999999999996
No 200
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=40.49 E-value=50 Score=31.93 Aligned_cols=28 Identities=21% Similarity=0.235 Sum_probs=22.7
Q ss_pred ccCChHHHHHHHHhcCCeEEEEcCCCHh
Q 003670 311 LQNGVPDCIDKLAQAGIKIWVLTGDKME 338 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 338 (804)
+++=+++.|+.=++.|=+|+.+||+.+-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~g 142 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPG 142 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 3445577888888999999999999764
No 201
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=39.92 E-value=47 Score=34.14 Aligned_cols=47 Identities=17% Similarity=0.181 Sum_probs=35.2
Q ss_pred EEEeeeccccCChHHHHHHHHhcCCeEEEEc---CCCHhhHHHHHHH-cCc
Q 003670 303 GATAVEDKLQNGVPDCIDKLAQAGIKIWVLT---GDKMETAINIGFA-CSL 349 (804)
Q Consensus 303 G~~~i~D~lr~~v~~~I~~L~~aGIkv~~lT---GD~~~ta~~ia~~-~gl 349 (804)
|++.-.+.+=+++.++|+.++++|++++++| |+........-.+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4444456777899999999999999999999 6666655554444 554
No 202
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=39.64 E-value=1.1e+02 Score=27.51 Aligned_cols=80 Identities=19% Similarity=0.243 Sum_probs=55.4
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
-+...|++|+.+.. .++.++..+ ...+.+-.++|+....+.--+.+++.++.+++
T Consensus 22 ~l~~~G~~V~~lg~-~~~~~~l~~------------------------~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~ 76 (119)
T cd02067 22 ALRDAGFEVIDLGV-DVPPEEIVE------------------------AAKEEDADAIGLSGLLTTHMTLMKEVIEELKE 76 (119)
T ss_pred HHHHCCCEEEECCC-CCCHHHHHH------------------------HHHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 45679999988773 355544322 12346788999988877777999999999999
Q ss_pred cCC-eE-EEEcCCCHhhHHHHHHHcCc
Q 003670 325 AGI-KI-WVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 325 aGI-kv-~~lTGD~~~ta~~ia~~~gl 349 (804)
.+- ++ +++-|-........+++.|.
T Consensus 77 ~~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 77 AGLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred cCCCCCeEEEECCCCChhHHHHHHcCC
Confidence 976 44 56666544433456777775
No 203
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=39.49 E-value=43 Score=30.22 Aligned_cols=39 Identities=23% Similarity=0.517 Sum_probs=30.1
Q ss_pred ccCChHHHHHHHHhcCC-eEEEEcCCCHhhHHHHHHHcCc
Q 003670 311 LQNGVPDCIDKLAQAGI-KIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGI-kv~~lTGD~~~ta~~ia~~~gl 349 (804)
..+.+++.++++.+.|+ .+|+.+|...+.+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 45678999999999999 5999999999999999999887
No 204
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=38.50 E-value=1e+02 Score=28.72 Aligned_cols=80 Identities=15% Similarity=0.177 Sum_probs=54.2
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
-+...|++|+-++... +.+++ + ....|.+-.++|+-++-=.--+..+++++.|++
T Consensus 24 ~l~~~GfeVi~LG~~v-~~e~~---------------------v---~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~ 78 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLS-PQEEF---------------------I---KAAIETKADAILVSSLYGHGEIDCKGLRQKCDE 78 (134)
T ss_pred HHHHCCCEEEECCCCC-CHHHH---------------------H---HHHHHcCCCEEEEecccccCHHHHHHHHHHHHH
Confidence 4567899999988643 22222 1 123456888899888776666678899999999
Q ss_pred cCC--eEEEEcCCC------HhhHHHHHHHcCc
Q 003670 325 AGI--KIWVLTGDK------METAINIGFACSL 349 (804)
Q Consensus 325 aGI--kv~~lTGD~------~~ta~~ia~~~gl 349 (804)
+|+ .+|++-|-. ...-..-++++|+
T Consensus 79 ~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 79 AGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 997 567777742 1122445788885
No 205
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=38.45 E-value=28 Score=28.41 Aligned_cols=47 Identities=17% Similarity=0.298 Sum_probs=31.9
Q ss_pred CCCeEEEecCC-cCChhhhhhcCcce-ee-cCcchh-hh---hcccchhcchHh
Q 003670 459 TGKTTLAIGDG-ANDVGMLQEADIGI-GI-SGVEGM-QA---VMSSDIAIAQFR 505 (804)
Q Consensus 459 ~~~~vlaiGDG-~ND~~ml~~AdvGI-~i-~g~~~~-~a---~~aaD~~i~~f~ 505 (804)
....++||||. ..|+.+=+.+++-- .+ +|.... +. ...+|+++.++.
T Consensus 20 ~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 20 DPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp GGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred CHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 45679999999 99999999998854 33 333221 11 246788876644
No 206
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=38.38 E-value=53 Score=31.93 Aligned_cols=41 Identities=22% Similarity=0.274 Sum_probs=31.2
Q ss_pred cccCChHHHHHHHHhcCCeEEEEc-CCCHhhHHHHHHHcCcc
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLT-GDKMETAINIGFACSLL 350 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lT-GD~~~ta~~ia~~~gl~ 350 (804)
.+-++|++.++.|++.|+++-++| -+.++.|..+-..+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 478999999999999999999999 58899999999888886
No 207
>KOG4050 consensus Glutamate transporter EAAC1-interacting protein GTRAP3-18 [Amino acid transport and metabolism; Signal transduction mechanisms]
Probab=37.44 E-value=2.4e+02 Score=26.83 Aligned_cols=44 Identities=20% Similarity=0.228 Sum_probs=23.5
Q ss_pred cccchhcchHhhHHHHHHHhhccchhhhhHHHHHHHHHHHHHHH
Q 003670 495 MSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGL 538 (804)
Q Consensus 495 ~aaD~~i~~f~~l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~ 538 (804)
.--||++...++-.+-.-.-.||+-+-++..+.|.--+-++++.
T Consensus 21 a~ddF~lgS~Rfa~Pd~~D~~kW~nRVisNLLYyQTNYfv~~it 64 (188)
T KOG4050|consen 21 ALDDFLLGSDRFARPDFNDFKKWNNRVISNLLYYQTNYFVTFIT 64 (188)
T ss_pred hHHHhccCcccccCCCCccHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 34466666655533222334567776677666666444344433
No 208
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=37.23 E-value=3.7e+02 Score=26.93 Aligned_cols=10 Identities=0% Similarity=0.016 Sum_probs=5.0
Q ss_pred HHHHHHHHhh
Q 003670 733 FAYSAIQMRF 742 (804)
Q Consensus 733 ~i~k~i~r~~ 742 (804)
.+..+++|+|
T Consensus 192 ~~~~~lkkk~ 201 (206)
T PF06570_consen 192 ALRFYLKKKY 201 (206)
T ss_pred HHHHHHHHHh
Confidence 3345555555
No 209
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=37.18 E-value=52 Score=31.49 Aligned_cols=43 Identities=14% Similarity=0.006 Sum_probs=37.5
Q ss_pred eeccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcc
Q 003670 307 VEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 307 i~D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
..=++|||+.+.++.|++. +++.+.|.-....|..+...++.-
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3445899999999999955 999999999999999999888754
No 210
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.17 E-value=4.2e+02 Score=30.68 Aligned_cols=30 Identities=23% Similarity=0.278 Sum_probs=22.2
Q ss_pred cCCCcccchHHHHHHHHHHHhhhhHHHHhc
Q 003670 548 TFSGQPAYNDWFLSLYNVFFTSLPVIALGV 577 (804)
Q Consensus 548 ~~s~~~~~~~~~~~~~n~~~~~lp~~~l~~ 577 (804)
.-||..++..+..++.--+..++|...+|.
T Consensus 425 ~SSgAvPF~T~~~ll~LwF~isVPLsf~G~ 454 (628)
T KOG1278|consen 425 HSSGAVPFSTMVALLFLWFGISVPLSFVGG 454 (628)
T ss_pred CCCCcccHHHHHHHHHHHHHhhhhHHHhhH
Confidence 456667788887777777777889877764
No 211
>PRK06231 F0F1 ATP synthase subunit B; Validated
Probab=33.86 E-value=3e+02 Score=27.61 Aligned_cols=48 Identities=15% Similarity=0.076 Sum_probs=29.4
Q ss_pred HHHHHccCh--HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHH
Q 003670 707 FIEALAPAP--LFWLVTLFVVISTLIPYFAYSAIQMRFFPMYHGMIQWIR 754 (804)
Q Consensus 707 ~~~~~~~~~--~~wl~~l~v~~~~ll~~~i~k~i~r~~~P~~~~ii~e~~ 754 (804)
+++.+.+.+ ..|-++-+++++.++-.++|+.+.+.+--....|-+++.
T Consensus 40 ~~~~~~~~~~~~i~qlInFlIlv~lL~k~l~kPi~~~L~~R~~~I~~~L~ 89 (205)
T PRK06231 40 IINELFPNFWVFIAHLIAFSILLLLGIFLFWKPTQRFLNKRKELIEAEIN 89 (205)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555655543 334445567777788888888877766555555544444
No 212
>PHA03048 IMV membrane protein; Provisional
Probab=33.65 E-value=2.5e+02 Score=23.93 Aligned_cols=27 Identities=19% Similarity=0.161 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCh
Q 003670 720 VTLFVVISTLIPYFAYSAIQMRFFPMY 746 (804)
Q Consensus 720 ~~l~v~~~~ll~~~i~k~i~r~~~P~~ 746 (804)
+++.+.++.++..+++..+.|+..|+.
T Consensus 49 i~FIlgivl~lG~~ifsmy~r~C~~~~ 75 (93)
T PHA03048 49 IAFVLGIVMTIGMLIYSMWGRYCTPSK 75 (93)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCc
Confidence 366777788999999999999999853
No 213
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=32.75 E-value=3.4e+02 Score=24.29 Aligned_cols=27 Identities=11% Similarity=0.184 Sum_probs=22.8
Q ss_pred CChHHHHHHHHhcCCeEEEEcCCCHhh
Q 003670 313 NGVPDCIDKLAQAGIKIWVLTGDKMET 339 (804)
Q Consensus 313 ~~v~~~I~~L~~aGIkv~~lTGD~~~t 339 (804)
+.+.++++.+++.|++++++|++....
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~ 100 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSP 100 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCCh
Confidence 457888999999999999999986543
No 214
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=32.71 E-value=47 Score=34.22 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=19.6
Q ss_pred CCeEEEecCC-cCChhhhhhcCcce
Q 003670 460 GKTTLAIGDG-ANDVGMLQEADIGI 483 (804)
Q Consensus 460 ~~~vlaiGDG-~ND~~ml~~AdvGI 483 (804)
...++||||. .+|+.+=+.|++-.
T Consensus 213 ~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 213 KNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred cccEEEECCCcHHHHHHHHHCCCeE
Confidence 3579999999 59999888887743
No 215
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=31.89 E-value=2.5e+02 Score=28.97 Aligned_cols=30 Identities=20% Similarity=0.340 Sum_probs=26.9
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHhh
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKMET 339 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~t 339 (804)
++-+|+.+.++...+.|.+|..+|.+..++
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQEN 151 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhc
Confidence 466899999999999999999999988765
No 216
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=31.65 E-value=9e+02 Score=29.94 Aligned_cols=29 Identities=28% Similarity=0.556 Sum_probs=17.0
Q ss_pred CCCcccchHHHHHHHHHHHhhhhHHHHhcc
Q 003670 549 FSGQPAYNDWFLSLYNVFFTSLPVIALGVF 578 (804)
Q Consensus 549 ~s~~~~~~~~~~~~~n~~~~~lp~~~l~~~ 578 (804)
|+|-.++......|.+. +..+|.+++|++
T Consensus 132 fsg~~~~~~~~~~fld~-~i~lPL~llgie 160 (843)
T PF09586_consen 132 FSGYVIYYSFNIMFLDA-MILLPLLLLGIE 160 (843)
T ss_pred HHHHHHHHhhhHHHHHH-HHHHHHHHHHHH
Confidence 33333343444555554 346899999984
No 217
>PRK10263 DNA translocase FtsK; Provisional
Probab=30.42 E-value=1.1e+03 Score=30.80 Aligned_cols=9 Identities=56% Similarity=0.947 Sum_probs=4.1
Q ss_pred hHHHHHHHH
Q 003670 646 IFGATMYTC 654 (804)
Q Consensus 646 ~~~t~~ft~ 654 (804)
.||...|..
T Consensus 78 LFGl~AYLL 86 (1355)
T PRK10263 78 IFGVMAYTI 86 (1355)
T ss_pred HHhHHHHHH
Confidence 445444443
No 218
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=30.18 E-value=1.6e+02 Score=27.19 Aligned_cols=80 Identities=20% Similarity=0.218 Sum_probs=56.6
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
.+...|+.|+-.... .+.+++- ....|.+-..+|+-++...-.+.+++.++.|++
T Consensus 25 ~l~~~GfeVi~lg~~-~s~e~~v------------------------~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 25 AYADLGFDVDVGPLF-QTPEEIA------------------------RQAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHhCCcEEEECCCC-CCHHHHH------------------------HHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 467899999887754 2333321 233567899999999999999999999999999
Q ss_pred cCC-eE-EEEcCCCHhhHHHHHHHcCc
Q 003670 325 AGI-KI-WVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 325 aGI-kv-~~lTGD~~~ta~~ia~~~gl 349 (804)
+|. .+ +++-|-.+..-..-.+++|+
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gv 106 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGV 106 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCC
Confidence 987 44 44544444444455677787
No 219
>PF08552 Kei1: Inositolphosphorylceramide synthase subunit Kei1; InterPro: IPR013862 This entry indicates Golgi proteins of unknown function.
Probab=29.42 E-value=5.1e+02 Score=25.70 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=21.5
Q ss_pred HHHhhcCCCcccchHHHHHHHHHHHhhhhHHHHhc
Q 003670 543 YEAYTTFSGQPAYNDWFLSLYNVFFTSLPVIALGV 577 (804)
Q Consensus 543 ~~~~~~~s~~~~~~~~~~~~~n~~~~~lp~~~l~~ 577 (804)
|.+...|.|-+ .+.+|+++|-.-+-.+++++.++
T Consensus 29 YGlLAlfTG~~-ls~~Q~s~YlySi~~L~~~~~~l 62 (189)
T PF08552_consen 29 YGLLALFTGHP-LSFLQLSMYLYSILALVLFAWGL 62 (189)
T ss_pred HHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHh
Confidence 33333444533 56677777666666688888886
No 220
>PF03419 Peptidase_U4: Sporulation factor SpoIIGA This family belongs to family U4 of the peptidase classification.; InterPro: IPR005081 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This group of peptidases belong to the MEROPS peptidase family U4 (SpoIIGA peptidase family, clan U-). Sporulation in bacteria such as Bacillus subtilis involves the formation of a polar septum, which divides the sporangium into a mother cell and a forespore. The sigma E factor, which is encoded within the spoIIG operon, is a cell-specific regulatory protein that directs gene transcription in the mother cell. Sigma E is synthesised as an inactive proprotein pro-sigma E, which is converted to the mature factor by the putative processing enzyme SpoIIGA []. ; GO: 0004190 aspartic-type endopeptidase activity, 0006508 proteolysis, 0030436 asexual sporulation
Probab=27.90 E-value=7.5e+02 Score=26.22 Aligned_cols=25 Identities=16% Similarity=0.095 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC
Q 003670 721 TLFVVISTLIPYFAYSAIQMRFFPM 745 (804)
Q Consensus 721 ~l~v~~~~ll~~~i~k~i~r~~~P~ 745 (804)
++..+++.++....++++++.....
T Consensus 130 ~~~~~~~~~~~~~~~~~i~~~~~~~ 154 (293)
T PF03419_consen 130 LIGFIIAYLLLKRLWKYIKRRRIKK 154 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3444555566677888877755443
No 221
>PRK10053 hypothetical protein; Provisional
Probab=27.65 E-value=33 Score=31.61 Aligned_cols=26 Identities=23% Similarity=0.381 Sum_probs=21.8
Q ss_pred eecCCCchhhccCceEEEcCCCcccc
Q 003670 11 HARTSNLNEELGQVDTILSDKTGTLT 36 (804)
Q Consensus 11 ~~r~~~~~E~Lg~v~~i~~DKTGTLT 36 (804)
.+=+.++...||.=+|+|.|+|||++
T Consensus 64 V~L~G~Iv~~lg~d~Y~F~D~tG~I~ 89 (130)
T PRK10053 64 VSLRGNLIDHKGDDRYVFRDKSGEIN 89 (130)
T ss_pred EEEEEEEEEEeCCceEEEECCCCcEE
Confidence 34456789999999999999999865
No 222
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=26.94 E-value=52 Score=31.56 Aligned_cols=23 Identities=35% Similarity=0.667 Sum_probs=20.8
Q ss_pred cCChHHHHHHHHhcCCeEEEEcC
Q 003670 312 QNGVPDCIDKLAQAGIKIWVLTG 334 (804)
Q Consensus 312 r~~v~~~I~~L~~aGIkv~~lTG 334 (804)
-++|+++|++|.+.|.+++|+|-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 46899999999999999999995
No 223
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=25.36 E-value=2.3e+02 Score=26.46 Aligned_cols=80 Identities=16% Similarity=0.182 Sum_probs=55.5
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
-+...|++|+.++.. ++.+++. ....+.+-.++|+-...-.-.+.+++.++.|++
T Consensus 26 ~lr~~G~eVi~LG~~-vp~e~i~------------------------~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 26 ALTEAGFEVINLGVM-TSQEEFI------------------------DAAIETDADAILVSSLYGHGEIDCRGLREKCIE 80 (137)
T ss_pred HHHHCCCEEEECCCC-CCHHHHH------------------------HHHHHcCCCEEEEcCccccCHHHHHHHHHHHHh
Confidence 456899999999864 2333221 123456888999988888888999999999999
Q ss_pred cCC--eEEEEcCCC------HhhHHHHHHHcCc
Q 003670 325 AGI--KIWVLTGDK------METAINIGFACSL 349 (804)
Q Consensus 325 aGI--kv~~lTGD~------~~ta~~ia~~~gl 349 (804)
.|. ..|++-|-- ......-++++|+
T Consensus 81 ~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 81 AGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred cCCCCCeEEEECCCCCCccChHHHHHHHHHcCC
Confidence 955 235555543 3444567788885
No 224
>PHA02898 virion envelope protein; Provisional
Probab=25.22 E-value=4.3e+02 Score=22.51 Aligned_cols=29 Identities=7% Similarity=0.086 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChHH
Q 003670 720 VTLFVVISTLIPYFAYSAIQMRFFPMYHG 748 (804)
Q Consensus 720 ~~l~v~~~~ll~~~i~k~i~r~~~P~~~~ 748 (804)
+++.+.++.++..++++.+.|+..|+...
T Consensus 50 i~FIlgivl~lG~~ifs~y~r~C~~~~~~ 78 (92)
T PHA02898 50 ISFILAIILILGIIFFKGYNMFCGGNTTD 78 (92)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCccc
Confidence 46677778899999999999999986543
No 225
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=25.17 E-value=56 Score=32.26 Aligned_cols=29 Identities=24% Similarity=0.335 Sum_probs=23.5
Q ss_pred cccCChHHHHHHHHhcCCeEEEEcCCCHh
Q 003670 310 KLQNGVPDCIDKLAQAGIKIWVLTGDKME 338 (804)
Q Consensus 310 ~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ 338 (804)
++-+|+.+++++|.+.|..++++|+....
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 57789999999999999999999987654
No 226
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=24.56 E-value=2.9e+02 Score=29.03 Aligned_cols=83 Identities=13% Similarity=0.208 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhh-hccceEeEEEeeeccccCCh
Q 003670 237 VETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETI-EKDLVLLGATAVEDKLQNGV 315 (804)
Q Consensus 237 ~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~i-e~dl~llG~~~i~D~lr~~v 315 (804)
+.+.+.++.+...|---+-+.+-... ..+...++...... +.++.-+--+...|.=+.+.
T Consensus 15 ~~l~~~~~~l~~~~pd~isvT~~~~~-------------------~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l 75 (272)
T TIGR00676 15 ENLWETVDRLSPLDPDFVSVTYGAGG-------------------STRDRTVRIVRRIKKETGIPTVPHLTCIGATREEI 75 (272)
T ss_pred HHHHHHHHHHhcCCCCEEEeccCCCC-------------------CcHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHHH
Confidence 55666666766555445555543221 22333333333333 24788888888889888889
Q ss_pred HHHHHHHHhcCCe-EEEEcCCCHh
Q 003670 316 PDCIDKLAQAGIK-IWVLTGDKME 338 (804)
Q Consensus 316 ~~~I~~L~~aGIk-v~~lTGD~~~ 338 (804)
.+.+..++++||+ +.++|||...
T Consensus 76 ~~~L~~~~~~Gi~nvL~l~GD~~~ 99 (272)
T TIGR00676 76 REILREYRELGIRHILALRGDPPK 99 (272)
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCC
Confidence 9999999999996 6669999874
No 227
>KOG1504 consensus Ornithine carbamoyltransferase OTC/ARG3 [Amino acid transport and metabolism]
Probab=24.53 E-value=98 Score=31.80 Aligned_cols=47 Identities=34% Similarity=0.397 Sum_probs=31.6
Q ss_pred EEcCChhhH----HHHHHHH-HccCCCeEEEecCCcCCh--hhhhhcCcceeec
Q 003670 440 CCRSSPRQK----ALVTRLV-KSGTGKTTLAIGDGANDV--GMLQEADIGIGIS 486 (804)
Q Consensus 440 ~~r~sP~qK----~~iv~~l-k~~~~~~vlaiGDG~ND~--~ml~~AdvGI~i~ 486 (804)
|-...|.|- ..+++.+ |.-.|-.+.-||||.|=+ -|+.+|-+||..+
T Consensus 165 ~D~~HPlQ~laD~LTi~E~f~ks~~glkvawiGD~NNvlhs~mia~ak~gih~s 218 (346)
T KOG1504|consen 165 CDHFHPLQILADLLTIIEHFGKSVEGLKVAWIGDGNNVLHSWMIAAAKFGIHFS 218 (346)
T ss_pred ccccChHHHHHHHHHHHHHHhccccccEEEEEccccHHHHHHHHHhhhcceEEE
Confidence 333456653 3556666 333677899999999844 4788888888653
No 228
>PRK08508 biotin synthase; Provisional
Probab=24.30 E-value=6.3e+02 Score=26.61 Aligned_cols=37 Identities=19% Similarity=0.107 Sum_probs=26.6
Q ss_pred hHHHHHHHHhcCCe-EE------------EEcCCCHhh---HHHHHHHcCccc
Q 003670 315 VPDCIDKLAQAGIK-IW------------VLTGDKMET---AINIGFACSLLR 351 (804)
Q Consensus 315 v~~~I~~L~~aGIk-v~------------~lTGD~~~t---a~~ia~~~gl~~ 351 (804)
.++.+++|+++|+. +- +.||...+. ++..|+++|+-.
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v 153 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGL 153 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCee
Confidence 58999999999983 33 456766555 455688899743
No 229
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=24.29 E-value=5.2e+02 Score=23.19 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChH
Q 003670 237 VETRDHVNKYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVP 316 (804)
Q Consensus 237 ~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~ 316 (804)
+...+.++.+..+|+++.+++-+........ | .+.+....+.+ ++.+...+......+|. +
T Consensus 28 ~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~-~---------------~~~~~~~l~~~--~l~~~~~~~~~~~~KP~-~ 88 (132)
T TIGR01662 28 PEVPDALAELKEAGYKVVIVTNQSGIGRGKF-S---------------SGRVARRLEEL--GVPIDVLYACPHCRKPK-P 88 (132)
T ss_pred CCHHHHHHHHHHCCCEEEEEECCccccccHH-H---------------HHHHHHHHHHC--CCCEEEEEECCCCCCCC-h
Confidence 4456678888899999988875432111000 0 01111111222 12222222111233443 3
Q ss_pred HHH-HHHHhc-CC--eEEEEcCCCHhhHHHHHHHcCcc
Q 003670 317 DCI-DKLAQA-GI--KIWVLTGDKMETAINIGFACSLL 350 (804)
Q Consensus 317 ~~I-~~L~~a-GI--kv~~lTGD~~~ta~~ia~~~gl~ 350 (804)
+.+ ..+++. |+ .=.+.=||....-+..|+++|+-
T Consensus 89 ~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 89 GMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 343 334444 46 33677899767778889999873
No 230
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=23.83 E-value=68 Score=30.85 Aligned_cols=28 Identities=21% Similarity=0.342 Sum_probs=23.9
Q ss_pred CChHHHHHHHHhcCCeEEEEcCCCHhhH
Q 003670 313 NGVPDCIDKLAQAGIKIWVLTGDKMETA 340 (804)
Q Consensus 313 ~~v~~~I~~L~~aGIkv~~lTGD~~~ta 340 (804)
++|.++|+..++.|++++.+||++--..
T Consensus 123 ~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~ 150 (176)
T COG0279 123 KNVLKAIEAAKEKGMTVIALTGKDGGKL 150 (176)
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCCccc
Confidence 5678899999999999999999875433
No 231
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=23.77 E-value=1.1e+02 Score=33.54 Aligned_cols=38 Identities=18% Similarity=0.175 Sum_probs=34.5
Q ss_pred ccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHc-C
Q 003670 311 LQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFAC-S 348 (804)
Q Consensus 311 lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~-g 348 (804)
.-|++++.++.|+++|+++.++|+-....+..+...+ |
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 3589999999999999999999999999999888885 5
No 232
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=23.24 E-value=1.7e+02 Score=27.52 Aligned_cols=49 Identities=20% Similarity=0.249 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHccChHHHHHHHHHHHHHHHHHHH
Q 003670 673 IQHIFIWGSIALWYLFMLAYGAITPTHSTNAYKVFIEALAPAPLFWLVTLFVVISTLIPYFA 734 (804)
Q Consensus 673 ~~~~~i~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~v~~~~ll~~~i 734 (804)
.+|+.+|+++.+.++.+.+..+..+. ++.++.|+.++++.+.+.+..+=
T Consensus 33 ~~HP~L~~~M~~~y~~~~~lm~~spy-------------~G~~s~~~ftv~fv~m~~~llfD 81 (155)
T PF10777_consen 33 RNHPYLCLAMYAAYLAVAALMYYSPY-------------FGLGSVWGFTVFFVVMAAFLLFD 81 (155)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHhcch-------------hhhHHHHHHHHHHHHHHHHHHhh
Confidence 46778888777777766665544432 23456676666555554444333
No 233
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=22.34 E-value=4.5e+02 Score=27.08 Aligned_cols=25 Identities=28% Similarity=0.367 Sum_probs=21.4
Q ss_pred CCCeEEEecCCc-CChhhhhhcCcce
Q 003670 459 TGKTTLAIGDGA-NDVGMLQEADIGI 483 (804)
Q Consensus 459 ~~~~vlaiGDG~-ND~~ml~~AdvGI 483 (804)
..+.++||||.. +|+.+=+.+++-.
T Consensus 194 ~~~~~~~VGD~~~~Di~~a~~~G~~~ 219 (249)
T TIGR01457 194 EREETLMVGDNYLTDIRAGIDAGIDT 219 (249)
T ss_pred CcccEEEECCCchhhHHHHHHcCCcE
Confidence 457899999997 8999999998854
No 234
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=21.97 E-value=1.9e+02 Score=28.85 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=54.2
Q ss_pred HHHhccceEEEEEEEeCCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhhccceEeEEEeeeccccCChHHHHHHHHh
Q 003670 245 KYADAGLRTLILAYRVLDEEEYKVFNEKFSEAKNSVSADRETLIDEVTETIEKDLVLLGATAVEDKLQNGVPDCIDKLAQ 324 (804)
Q Consensus 245 ~~~~~G~r~l~~a~k~l~~~e~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ie~dl~llG~~~i~D~lr~~v~~~I~~L~~ 324 (804)
-+...|++|+-++ ..++.+++.+ ...+.+-.++|+-+.-..--+.+++.|+.|++
T Consensus 105 ~l~~~G~~vi~lG-~~~p~~~l~~------------------------~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~ 159 (201)
T cd02070 105 MLEANGFEVIDLG-RDVPPEEFVE------------------------AVKEHKPDILGLSALMTTTMGGMKEVIEALKE 159 (201)
T ss_pred HHHHCCCEEEECC-CCCCHHHHHH------------------------HHHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 4568999998777 4455544321 12345788999998888888899999999999
Q ss_pred cCC--eEEEEcCCCHhhHHHHHHHcCc
Q 003670 325 AGI--KIWVLTGDKMETAINIGFACSL 349 (804)
Q Consensus 325 aGI--kv~~lTGD~~~ta~~ia~~~gl 349 (804)
++. ++.++=|-..-+. ..+.++|-
T Consensus 160 ~~~~~~~~i~vGG~~~~~-~~~~~~Ga 185 (201)
T cd02070 160 AGLRDKVKVMVGGAPVNQ-EFADEIGA 185 (201)
T ss_pred CCCCcCCeEEEECCcCCH-HHHHHcCC
Confidence 987 6544433333332 46777764
No 235
>PLN03140 ABC transporter G family member; Provisional
Probab=21.94 E-value=2e+03 Score=29.12 Aligned_cols=12 Identities=17% Similarity=0.556 Sum_probs=7.5
Q ss_pred hccchhhhhccc
Q 003670 588 LKFPLLYQEGVQ 599 (804)
Q Consensus 588 ~~~P~ly~~~~~ 599 (804)
.+.|-+|++...
T Consensus 594 ~~r~vf~ker~~ 605 (1470)
T PLN03140 594 QRLPVFYKQRDL 605 (1470)
T ss_pred hccchhHHhhhc
Confidence 456777776554
No 236
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=21.82 E-value=2.3e+02 Score=24.24 Aligned_cols=29 Identities=17% Similarity=0.349 Sum_probs=22.2
Q ss_pred EEeeeccccCChHHHHHHHHhcCCe-EEEE
Q 003670 304 ATAVEDKLQNGVPDCIDKLAQAGIK-IWVL 332 (804)
Q Consensus 304 ~~~i~D~lr~~v~~~I~~L~~aGIk-v~~l 332 (804)
.+++.....|.+.++++.|++.|++ |+++
T Consensus 36 ~~a~~~~~~P~i~~~l~~l~~~g~~~vvvv 65 (101)
T cd03409 36 YVGFQSGLGPDTEEAIRELAEEGYQRVVIV 65 (101)
T ss_pred EEEEECCCCCCHHHHHHHHHHcCCCeEEEE
Confidence 4555555789999999999999984 4444
No 237
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=21.76 E-value=1.5e+02 Score=31.54 Aligned_cols=44 Identities=20% Similarity=0.249 Sum_probs=34.9
Q ss_pred hccceEeEEEeeeccccCChHHHHHHHHhcCC-eEEEEcCCCHhh
Q 003670 296 EKDLVLLGATAVEDKLQNGVPDCIDKLAQAGI-KIWVLTGDKMET 339 (804)
Q Consensus 296 e~dl~llG~~~i~D~lr~~v~~~I~~L~~aGI-kv~~lTGD~~~t 339 (804)
+.++..+--+...|.=+.+...-+..++++|| .|.++|||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 45788999999999888888999999999999 699999998754
No 238
>PF02261 Asp_decarbox: Aspartate decarboxylase; InterPro: IPR003190 Decarboxylation of aspartate is the major route of alanine production in bacteria, and is catalysed by the enzyme aspartate decarboxylase. The enzyme is translated as an inactive proenzyme of two chains, A and B. This family contains both chains of aspartate decarboxylase.; GO: 0004068 aspartate 1-decarboxylase activity, 0006523 alanine biosynthetic process; PDB: 1PYU_C 1AW8_A 1PYQ_B 3TM7_C 1PT1_A 1PQH_A 1PPY_B 1PT0_B 1PQF_A 1PQE_A ....
Probab=21.64 E-value=65 Score=28.92 Aligned_cols=82 Identities=27% Similarity=0.392 Sum_probs=48.0
Q ss_pred eEEecCCccHHHHHHHHHHcCcEEEeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEEEc
Q 003670 139 VMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLLCK 218 (804)
Q Consensus 139 ~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~K 218 (804)
+.|+|+=..+..|+++|.-. .|+.+.+.--++.-+..+-++..+.|+-.+..-
T Consensus 20 L~Y~GSitID~~Ll~aagi~---------------------------p~E~V~V~Nv~nG~Rf~TYvI~g~~GSg~I~lN 72 (116)
T PF02261_consen 20 LNYEGSITIDEDLLDAAGIL---------------------------PYEQVQVVNVNNGERFETYVIPGERGSGVICLN 72 (116)
T ss_dssp TTSTSCEEEEHHHHHHCT-----------------------------TTBEEEEEETTT--EEEEEEEEESTTTT-EEEE
T ss_pred cccceeeEECHHHHHHcCCC---------------------------cCCEEEEEECCCCcEEEEEEEEccCCCcEEEEC
Confidence 44666656777788776432 333344444444445555566666655556666
Q ss_pred CchhHhHHHhhccCcccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHH
Q 003670 219 GADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVF 269 (804)
Q Consensus 219 Ga~~~i~~~~~~~~~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~ 269 (804)
||.-.. .+.|=++++.||..++++|...|
T Consensus 73 GaAArl----------------------~~~GD~vII~sy~~~~~~e~~~~ 101 (116)
T PF02261_consen 73 GAAARL----------------------VQVGDRVIIMSYAQVDEEEAKNH 101 (116)
T ss_dssp GGGGGC----------------------S-TT-EEEEEEEEEEEHHHHHH-
T ss_pred CHHHhc----------------------cCCCCEEEEEEcccCCHHHHhhC
Confidence 775332 34578999999999999987765
No 239
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=21.51 E-value=1.8e+02 Score=26.52 Aligned_cols=84 Identities=18% Similarity=0.306 Sum_probs=52.0
Q ss_pred CceEEecCCccHHHHHHHHHHcCcEEEeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEE
Q 003670 137 GKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLL 216 (804)
Q Consensus 137 ~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 216 (804)
..+.|.|+=..+..|+++|.-+ .|+.+.+..-+...+.-+-++..+.|+-.+.
T Consensus 18 a~L~Y~GSItID~~Lm~aagi~---------------------------p~E~V~V~Nv~NG~Rf~TYvI~G~~GSg~I~ 70 (126)
T TIGR00223 18 ANLNYEGSITIDEDLLDAAGIL---------------------------ENEKVDIVNVNNGKRFSTYAIAGKRGSRIIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCCC---------------------------CCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 3467888777888898877432 2333333333333333444455555555566
Q ss_pred EcCchhHhHHHhhccCcccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHH
Q 003670 217 CKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVF 269 (804)
Q Consensus 217 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~ 269 (804)
.-||.- .+.+.|=|++..||-.++++|...|
T Consensus 71 lNGAAA----------------------rl~~~GD~VII~sy~~~~~~e~~~~ 101 (126)
T TIGR00223 71 VNGAAA----------------------RCVSVGDIVIIASYVTMPDEEARTH 101 (126)
T ss_pred eCCHHH----------------------hcCCCCCEEEEEECCcCCHHHHhcC
Confidence 667642 2345688999999999999886544
No 240
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=21.35 E-value=2.8e+02 Score=23.81 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHc-c-ChHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCChHHHHHH
Q 003670 679 WGSIALWYLFMLAYGAITPTHSTNAYKVFIEALA-P-APLFWLVTLFVVISTLIPYFAYSAIQMR-FFPMYHGMIQW 752 (804)
Q Consensus 679 ~~si~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~wl~~l~v~~~~ll~~~i~k~i~r~-~~P~~~~ii~e 752 (804)
...++.++.+.++..+.|..++.. +. . ....|+..++..+++++...+|-..-+. |-|...++++|
T Consensus 23 ~i~l~~y~~~~ll~a~~p~~m~~~--------v~~G~~t~g~~~g~~~~~~~~~l~~~Yv~~An~~~D~l~~~i~~e 91 (91)
T PF04341_consen 23 AIFLVLYFGFVLLSAFAPELMATP--------VFPGSLTLGIVLGLGQIVFAWVLTWLYVRRANREFDPLARAIREE 91 (91)
T ss_pred HHHHHHHHHHHHHHHHCHHHHcCc--------ccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHhC
Confidence 344455555555555555433331 11 1 2222333344445555555555443333 66666555554
No 241
>COG2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
Probab=21.25 E-value=1.4e+03 Score=26.92 Aligned_cols=137 Identities=15% Similarity=0.001 Sum_probs=0.0
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCccchhhhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 003670 601 VLFSWRRIFGWMFNGLYSAIIIFFFCKKAMEHQAFNDDGKTVGRDIFGATMYTCIVWVVNLQLALAISYFTLIQHIFIWG 680 (804)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~~~~~~~~t~~ft~~v~~~n~~~~l~~~~~~~~~~~~i~~ 680 (804)
....++.-+.....++..++.+++++.+.+....+...... .+.+.-...+++..+...+....++|+.-+.+..
T Consensus 2 ~~~~~~~~~~~~~l~ll~a~~~~l~~n~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~k~~~~~ 76 (555)
T COG2194 2 NLTLKRPKLTKLSLSLLLAWYFLLLLNFAFFLQVFLINSLD-----LSFSFSFLLALVFAFLLLLLLLSFPRLLKPLAGV 76 (555)
T ss_pred CccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHhhcCCCCCcchHHHHHH--------HHccChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003670 681 SIALWYLFMLAYGAITPTHSTNAYKVFIE--------ALAPAPLFWLVTLFVVISTLIPYFAYSAIQMRF 742 (804)
Q Consensus 681 si~~~~i~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~~~wl~~l~v~~~~ll~~~i~k~i~r~~ 742 (804)
.+++..+...........+.......+++ .+.+.+..|+++.++..+.++.....+..+.++
T Consensus 77 l~l~sa~asy~~~~y~i~~~~~mi~~v~~Tn~~E~~el~t~~~~~~l~~~g~l~~ll~~~~~~r~~~~~~ 146 (555)
T COG2194 77 LSLVSAAASYFAYFYGIIIDKNMLLNVFETNTAESSELLTLYFLLWLVLVGLLPALLIVLVIIRYYRVWL 146 (555)
T ss_pred HHHHHHHHHHHHHHhcccccHHHHHHHhcCChhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHhhchhHH
No 242
>TIGR00156 conserved hypothetical protein TIGR00156. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae.
Probab=21.04 E-value=54 Score=30.11 Aligned_cols=26 Identities=19% Similarity=0.390 Sum_probs=21.5
Q ss_pred eecCCCchhhccCceEEEcCCCcccc
Q 003670 11 HARTSNLNEELGQVDTILSDKTGTLT 36 (804)
Q Consensus 11 ~~r~~~~~E~Lg~v~~i~~DKTGTLT 36 (804)
..=+.++.+.||.=+|+|.|+|||++
T Consensus 60 V~L~G~Iv~~l~~d~Y~F~D~TG~I~ 85 (126)
T TIGR00156 60 VTLRGNIISHIGDDRYVFRDKSGEIN 85 (126)
T ss_pred EEEEEEEEEEeCCceEEEECCCCCEE
Confidence 33456788999998999999999865
No 243
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.87 E-value=1.1e+03 Score=25.71 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=12.8
Q ss_pred HHHHhhCCChHHHHHHHHHhC
Q 003670 737 AIQMRFFPMYHGMIQWIRHEG 757 (804)
Q Consensus 737 ~i~r~~~P~~~~ii~e~~~~~ 757 (804)
.+.|+|.|-..+.+-|-|..+
T Consensus 304 kv~r~fkpl~rRlLtEeEYee 324 (452)
T KOG3817|consen 304 KVRRRFKPLKRRLLTEEEYEE 324 (452)
T ss_pred HHHhhccccchhhcCHHHHHH
Confidence 345557777777766655443
No 244
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=20.82 E-value=2.1e+03 Score=28.82 Aligned_cols=41 Identities=10% Similarity=-0.109 Sum_probs=24.2
Q ss_pred cCChHHHHHHHHh-cCCeEEEEcCCCHhhHHHHHHHcCcccC
Q 003670 312 QNGVPDCIDKLAQ-AGIKIWVLTGDKMETAINIGFACSLLRP 352 (804)
Q Consensus 312 r~~v~~~I~~L~~-aGIkv~~lTGD~~~ta~~ia~~~gl~~~ 352 (804)
+..+.+.|+++.+ .|.-+++.|=|....+...+.++=++.+
T Consensus 245 ~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~ 286 (1394)
T TIGR00956 245 ALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE 286 (1394)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC
Confidence 3445556666654 3666667666665566666655555543
No 245
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=20.72 E-value=2e+02 Score=26.31 Aligned_cols=84 Identities=24% Similarity=0.326 Sum_probs=52.4
Q ss_pred CceEEecCCccHHHHHHHHHHcCcEEEeecCCeEEEEecCCCCcccceEEEEEeEeecCCCCCceEEEEEEcCCCeEEEE
Q 003670 137 GKVMYEAESPDEAAFVIAARELGFEFYQRTQTSISLHELDPMTGKKVERVYKLLNVLEFNSTRKRMSVIIRDEEGKILLL 216 (804)
Q Consensus 137 ~~~~y~~~sp~e~Alv~~a~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 216 (804)
..+.|.|+=..+..|+++|.-. .|+.+.+..-+...+.-+-++..+.|+-.+.
T Consensus 18 a~L~Y~GSitID~~Ll~aagi~---------------------------p~E~V~V~Nv~NG~Rf~TYvI~g~~GSg~I~ 70 (126)
T PRK05449 18 ADLNYEGSITIDEDLLDAAGIL---------------------------ENEKVQIVNVNNGARFETYVIAGERGSGVIC 70 (126)
T ss_pred cccccceeEEECHHHHHhcCCC---------------------------CCCEEEEEECCCCcEEEEEEEEcCCCCCEEE
Confidence 3467888777888898877432 2333333333333344444555555555666
Q ss_pred EcCchhHhHHHhhccCcccHHHHHHHHHHHHhccceEEEEEEEeCCHHHHHHH
Q 003670 217 CKGADSVMFDRLAKNGRDFEVETRDHVNKYADAGLRTLILAYRVLDEEEYKVF 269 (804)
Q Consensus 217 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~~~~G~r~l~~a~k~l~~~e~~~~ 269 (804)
.-||.- .+.+-|=|++..||-.++++|...|
T Consensus 71 lNGAAA----------------------r~~~~GD~vII~ay~~~~~~e~~~~ 101 (126)
T PRK05449 71 LNGAAA----------------------RLVQVGDLVIIAAYAQMDEEEAKTH 101 (126)
T ss_pred eCCHHH----------------------hcCCCCCEEEEEECccCCHHHHhcC
Confidence 667642 2345688999999999999886544
No 246
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=20.50 E-value=1.2e+02 Score=31.96 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=21.0
Q ss_pred CCCeEEEecCCc-CChhhhhhcCcce
Q 003670 459 TGKTTLAIGDGA-NDVGMLQEADIGI 483 (804)
Q Consensus 459 ~~~~vlaiGDG~-ND~~ml~~AdvGI 483 (804)
....++||||.. .|+.+=+.|++-.
T Consensus 218 ~~~~~lmIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 218 DPARTLMVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred ChhhEEEECCChHHHHHHHHHcCCcE
Confidence 457899999995 9999999988754
No 247
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=20.45 E-value=1.3e+03 Score=26.48 Aligned_cols=39 Identities=13% Similarity=0.184 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHh
Q 003670 718 WLVTLFVVISTLIPYFAYSAIQMRFFPMYHGMIQWIRHE 756 (804)
Q Consensus 718 wl~~l~v~~~~ll~~~i~k~i~r~~~P~~~~ii~e~~~~ 756 (804)
|..+++++..++...++|++.-..--.+.++|++|.++.
T Consensus 434 ~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 434 YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 455666667777777888887777777889999998865
No 248
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=20.24 E-value=1.4e+02 Score=30.82 Aligned_cols=50 Identities=16% Similarity=0.313 Sum_probs=36.5
Q ss_pred ccccCChHHHHHHHHhcCCeEEEEcCCCHhhHHHHHHHcCcccCCCeEEE
Q 003670 309 DKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRPGMQQII 358 (804)
Q Consensus 309 D~lr~~v~~~I~~L~~aGIkv~~lTGD~~~ta~~ia~~~gl~~~~~~~i~ 358 (804)
-.+|+|+.+.++.|++.+|.+.|.|+-=-.....+-++-|...+|.+++.
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvS 138 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVS 138 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEE
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEe
Confidence 35899999999999999999999998877777777777788887766543
Done!