Query 003671
Match_columns 804
No_of_seqs 406 out of 1910
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 03:50:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003671.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003671hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1066 Glucosidase II catalyt 100.0 5E-226 1E-230 1847.0 58.2 769 12-804 12-799 (915)
2 PLN02763 hydrolase, hydrolyzin 100.0 3E-140 5E-145 1249.3 56.0 542 218-804 66-617 (978)
3 PRK10658 putative alpha-glucos 100.0 5E-136 1E-140 1199.5 68.9 610 84-778 50-665 (665)
4 COG1501 Alpha-glucosidases, fa 100.0 4E-136 9E-141 1207.8 56.7 547 212-800 139-689 (772)
5 KOG1065 Maltase glucoamylase a 100.0 2E-132 4E-137 1141.1 45.8 647 54-785 59-712 (805)
6 PRK10426 alpha-glucosidase; Pr 100.0 5E-126 1E-130 1112.7 58.0 537 208-785 64-627 (635)
7 PF01055 Glyco_hydro_31: Glyco 100.0 9E-114 2E-118 982.2 41.1 440 337-781 1-441 (441)
8 cd06602 GH31_MGAM_SI_GAA This 100.0 2.5E-94 5.4E-99 791.7 31.8 334 356-712 1-339 (339)
9 cd06603 GH31_GANC_GANAB_alpha 100.0 5.7E-94 1.2E-98 790.7 32.4 339 356-694 1-339 (339)
10 cd06600 GH31_MGAM-like This fa 100.0 1.6E-91 3.4E-96 763.8 30.6 317 356-694 1-317 (317)
11 cd06604 GH31_glucosidase_II_Ma 100.0 2.9E-91 6.3E-96 769.5 32.1 335 356-694 1-339 (339)
12 cd06601 GH31_lyase_GLase GLase 100.0 2.7E-84 5.9E-89 707.0 25.8 292 356-677 1-332 (332)
13 cd06598 GH31_transferase_CtsZ 100.0 3.9E-81 8.5E-86 682.4 29.0 307 356-677 1-317 (317)
14 cd06593 GH31_xylosidase_YicI Y 100.0 7E-81 1.5E-85 679.2 28.1 306 356-679 1-308 (308)
15 cd06591 GH31_xylosidase_XylS X 100.0 2.4E-79 5.2E-84 668.9 28.5 305 356-669 1-318 (319)
16 cd06599 GH31_glycosidase_Aec37 100.0 1.1E-77 2.4E-82 655.2 25.8 302 356-670 1-317 (317)
17 cd06597 GH31_transferase_CtsY 100.0 1.9E-77 4.1E-82 657.8 25.9 298 356-666 1-331 (340)
18 cd06594 GH31_glucosidase_YihQ 100.0 5.2E-77 1.1E-81 648.9 26.5 298 356-668 1-315 (317)
19 cd06595 GH31_xylosidase_XylS-l 100.0 6.5E-73 1.4E-77 611.0 23.8 280 355-669 1-291 (292)
20 cd06589 GH31 The enzymes of gl 100.0 1.8E-68 3.9E-73 569.3 23.1 262 356-670 1-265 (265)
21 cd06592 GH31_glucosidase_KIAA1 100.0 3.9E-62 8.4E-67 529.8 21.1 280 359-670 12-303 (303)
22 cd06596 GH31_CPE1046 CPE1046 i 100.0 6.2E-48 1.3E-52 397.7 17.5 240 356-684 1-261 (261)
23 PF13802 Gal_mutarotas_2: Gala 99.6 5E-15 1.1E-19 125.2 6.6 68 225-302 1-68 (68)
24 PF02065 Melibiase: Melibiase; 99.0 3.7E-09 8E-14 118.6 13.7 293 342-684 14-340 (394)
25 COG3345 GalA Alpha-galactosida 98.1 3.9E-05 8.5E-10 86.6 13.4 302 337-683 260-589 (687)
26 PLN03231 putative alpha-galact 98.0 0.00013 2.8E-09 80.8 15.4 190 376-605 15-255 (357)
27 PLN02229 alpha-galactosidase 97.9 0.00015 3.2E-09 81.8 14.1 177 355-605 57-253 (427)
28 PLN02899 alpha-galactosidase 97.9 0.00046 1E-08 80.1 17.8 206 356-605 26-286 (633)
29 PLN02692 alpha-galactosidase 97.8 0.00073 1.6E-08 76.0 17.1 189 344-605 39-247 (412)
30 PLN02808 alpha-galactosidase 97.5 0.0034 7.3E-08 70.5 17.5 178 355-605 26-223 (386)
31 PF13200 DUF4015: Putative gly 92.6 0.81 1.7E-05 50.4 10.5 115 371-498 5-131 (316)
32 PF14871 GHL6: Hypothetical gl 91.7 0.53 1.1E-05 45.2 7.0 84 422-515 47-132 (132)
33 PLN02355 probable galactinol-- 91.2 0.56 1.2E-05 56.4 7.9 102 333-437 161-312 (758)
34 PLN02219 probable galactinol-- 86.9 2.1 4.5E-05 51.7 8.4 274 336-634 160-521 (775)
35 TIGR02456 treS_nterm trehalose 86.1 4.7 0.0001 47.9 11.0 99 411-515 66-198 (539)
36 PRK10785 maltodextrin glucosid 84.5 6.9 0.00015 47.2 11.5 130 377-516 177-337 (598)
37 TIGR02403 trehalose_treC alpha 83.5 7 0.00015 46.5 10.9 132 377-516 25-195 (543)
38 PF02638 DUF187: Glycosyl hydr 82.4 7.5 0.00016 42.9 9.9 132 377-514 17-161 (311)
39 PLN00196 alpha-amylase; Provis 77.9 18 0.00038 41.8 11.3 60 378-439 43-112 (428)
40 PLN02684 Probable galactinol-- 74.8 9.9 0.00021 46.1 8.3 102 336-437 163-303 (750)
41 PRK10933 trehalose-6-phosphate 71.6 20 0.00043 42.8 10.0 73 378-455 32-116 (551)
42 TIGR01370 cysRS possible cyste 68.3 9.4 0.0002 42.1 5.8 101 394-515 64-168 (315)
43 TIGR01515 branching_enzym alph 68.2 17 0.00037 43.9 8.6 91 417-515 201-296 (613)
44 PRK03705 glycogen debranching 67.7 8.2 0.00018 47.0 5.7 91 420-515 243-337 (658)
45 PLN02711 Probable galactinol-- 67.5 13 0.00028 45.3 7.1 69 336-406 174-257 (777)
46 PF00128 Alpha-amylase: Alpha 63.9 18 0.00039 38.6 7.0 126 383-516 8-170 (316)
47 PF02449 Glyco_hydro_42: Beta- 63.1 11 0.00024 42.5 5.4 127 377-520 8-140 (374)
48 TIGR02102 pullulan_Gpos pullul 56.4 14 0.0003 47.5 5.0 85 421-515 557-643 (1111)
49 TIGR02104 pulA_typeI pullulana 56.3 14 0.00031 44.6 4.9 90 420-516 230-321 (605)
50 cd06416 GH25_Lys1-like Lys-1 i 56.0 14 0.00031 37.6 4.3 73 368-442 58-133 (196)
51 COG1649 Uncharacterized protei 54.6 54 0.0012 37.6 8.8 118 376-498 61-192 (418)
52 KOG1065 Maltase glucoamylase a 52.2 5.8 0.00013 48.4 0.8 164 552-727 473-637 (805)
53 PRK14510 putative bifunctional 51.9 21 0.00045 46.7 5.6 92 420-515 248-343 (1221)
54 TIGR02100 glgX_debranch glycog 51.7 22 0.00048 43.6 5.6 93 420-516 246-343 (688)
55 PLN02784 alpha-amylase 47.9 72 0.0016 39.9 9.0 58 379-439 521-588 (894)
56 PRK10265 chaperone-modulator p 46.7 34 0.00074 31.2 4.7 45 627-679 19-63 (101)
57 PLN02361 alpha-amylase 45.9 1.2E+02 0.0027 34.7 10.1 57 380-439 30-96 (401)
58 COG1523 PulA Type II secretory 45.1 33 0.00071 42.0 5.5 91 420-516 266-361 (697)
59 PRK09505 malS alpha-amylase; R 44.7 76 0.0016 39.0 8.6 24 417-440 287-313 (683)
60 TIGR02402 trehalose_TreZ malto 44.7 67 0.0014 38.4 8.0 79 421-515 162-245 (542)
61 cd04883 ACT_AcuB C-terminal AC 41.9 77 0.0017 26.1 5.9 56 380-436 14-69 (72)
62 KOG0471 Alpha-amylase [Carbohy 40.5 50 0.0011 39.4 6.1 51 391-441 50-110 (545)
63 COG0366 AmyA Glycosidases [Car 39.4 1.7E+02 0.0036 33.9 10.3 130 377-514 27-198 (505)
64 TIGR02103 pullul_strch alpha-1 39.1 37 0.0008 42.8 4.9 73 420-497 405-481 (898)
65 PF05691 Raffinose_syn: Raffin 37.9 1.3E+02 0.0027 37.2 8.8 70 336-405 156-238 (747)
66 COG2342 Predicted extracellula 36.8 1.6E+02 0.0036 31.9 8.5 108 392-518 41-150 (300)
67 PHA02530 pseT polynucleotide k 35.8 2.2E+02 0.0047 30.7 9.8 45 396-440 159-211 (300)
68 PLN03244 alpha-amylase; Provis 34.3 47 0.001 41.1 4.5 74 417-495 436-514 (872)
69 PLN02960 alpha-amylase 32.3 58 0.0013 40.8 4.9 111 377-496 414-540 (897)
70 PLN02447 1,4-alpha-glucan-bran 32.2 39 0.00085 41.7 3.5 107 382-497 254-375 (758)
71 PRK15447 putative protease; Pr 32.1 70 0.0015 35.1 5.2 107 379-496 15-130 (301)
72 PF01373 Glyco_hydro_14: Glyco 31.7 1.4E+02 0.003 34.2 7.3 90 380-478 17-124 (402)
73 PRK12313 glycogen branching en 31.4 60 0.0013 39.5 4.9 87 421-516 222-311 (633)
74 smart00642 Aamy Alpha-amylase 30.8 1.3E+02 0.0028 30.0 6.3 62 377-441 17-92 (166)
75 PF03537 Glyco_hydro_114: Glyc 30.1 77 0.0017 27.2 4.0 36 393-443 25-60 (74)
76 PRK14706 glycogen branching en 29.7 47 0.001 40.5 3.6 85 421-515 219-307 (639)
77 KOG0470 1,4-alpha-glucan branc 28.8 55 0.0012 39.8 3.8 74 420-499 312-396 (757)
78 PRK05402 glycogen branching en 27.1 78 0.0017 39.2 5.0 96 411-515 305-405 (726)
79 PRK06769 hypothetical protein; 25.3 93 0.002 30.9 4.3 47 394-440 3-52 (173)
80 TIGR00847 ccoS cytochrome oxid 25.0 53 0.0012 26.3 1.9 27 6-38 9-35 (51)
81 PF13591 MerR_2: MerR HTH fami 24.9 1.1E+02 0.0025 26.7 4.3 44 627-679 12-55 (84)
82 PRK12563 sulfate adenylyltrans 24.7 1.8E+02 0.0038 32.3 6.6 75 343-439 25-101 (312)
83 PF01301 Glyco_hydro_35: Glyco 22.9 1.3E+02 0.0027 33.4 5.1 76 368-448 16-92 (319)
84 cd06415 GH25_Cpl1-like Cpl-1 l 22.6 89 0.0019 31.8 3.6 71 368-443 57-132 (196)
85 PF09196 DUF1953: Domain of un 22.0 2E+02 0.0044 23.4 4.6 50 717-773 13-62 (66)
86 PF03597 CcoS: Cytochrome oxid 22.0 67 0.0015 25.0 1.9 25 6-36 8-32 (45)
87 TIGR01664 DNA-3'-Pase DNA 3'-p 21.7 1.2E+02 0.0027 30.0 4.3 45 396-440 14-66 (166)
88 PRK12568 glycogen branching en 21.6 99 0.0021 38.2 4.3 95 411-515 309-409 (730)
89 PRK14705 glycogen branching en 21.0 1.3E+02 0.0029 39.3 5.4 124 382-515 769-905 (1224)
90 PF14885 GHL15: Hypothetical g 20.8 79 0.0017 27.7 2.4 57 456-516 17-76 (79)
91 PF07485 DUF1529: Domain of Un 20.6 2.5E+02 0.0053 26.8 5.8 51 378-430 67-118 (123)
92 PF07172 GRP: Glycine rich pro 20.3 57 0.0012 29.6 1.5 18 1-20 1-18 (95)
No 1
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-226 Score=1847.01 Aligned_cols=769 Identities=55% Similarity=1.026 Sum_probs=717.1
Q ss_pred HHHHHHHHHhccCCceeeccCccccCCCchhhhhhcCCCC--CCceEeeeeEEEcCCCcEEEEEecCCCCCCCCcceEEE
Q 003671 12 SLILLAFLTYQAPPVLSWKKDEFRNCNQTPFCKRARSRNP--FSCSLIANQVTISDDGDISAKLVPKNHDDHHQINPLIL 89 (804)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~fk~C~qs~FC~R~R~~~~--~~y~~~~~sv~~~~~~~~~a~l~~~~~~~~~~~~~l~l 89 (804)
+||+++++. .+..||+|++||||+||+||||+|.+++ +.|++.++||+.. +++++|.|+++ .....|.|
T Consensus 12 a~lV~~~~~---~~l~av~r~~FKtCeQs~FCkR~R~i~~~~~~y~l~~~si~~~-~~~l~a~l~~~-----~~~~~l~~ 82 (915)
T KOG1066|consen 12 ALLVLAALG---SALGAVDRDNFKTCEQSGFCKRHRAITPSLTGYELLADSITHY-EDVLTANLINK-----QNKVLLPL 82 (915)
T ss_pred hHHHHhhhh---hhhhhccHhhcccccccchhhhhhhhcCCCCceeeecccceec-CCceEEeeeec-----CCCceeeE
Confidence 455555554 1345799999999999999999999985 3699999999998 89999999987 34458999
Q ss_pred EEEEEECCEEEEEEecCCCCCCCCCcccccccccCCcccccceeccccccccCCCCCCeeEeeCCCeEEEEEecCcEEEE
Q 003671 90 SLSIYQDGIVRLKIDEDPTLNPRKQRFQVPDVVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGYEAVLRHDPFEVYV 169 (804)
Q Consensus 90 ~v~~~~~~~~Rv~I~e~~~~~~~~~Ry~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~PF~i~v 169 (804)
+|+.++++++||+|||++. +.++||+++++++.+++...+...+... +...++..+++++++|+.+||+++|
T Consensus 83 sl~~Lkd~~vR~~IDE~~~--~~rkRy~~~~~lv~~~~~~~~~~~~~~~------t~~~~~~~~g~~~vvv~~~PF~v~~ 154 (915)
T KOG1066|consen 83 SLSGLKDSTVRFQIDEKES--ALRKRYQVPDALVSEPEEVRISVSKNDE------TATKIVGTNGKYKVVVTAKPFRVDF 154 (915)
T ss_pred EEEEecCceEEEEECCccc--ccccccCCchhhcCcchheeEEeeecCC------cccEEEEecCCeEEEEEeCCeEEEE
Confidence 9999999999999999743 6899999999998877665555544311 2345666667799999999999999
Q ss_pred EEecCCeEEEEeccCCceeeec---cccC--c-----chhhhhccccCCCCCCCcceEEEEEecCCCceeeCCCCCCCCC
Q 003671 170 RYKGGNSRVLSLNSNGLFDFEE---KNEG--E-----EWEERFRGHTDTRPYGPQSISFDVSFYDSDYVYGIPERATSFA 239 (804)
Q Consensus 170 ~~~~~~~~~~~~n~~~~~~~e~---~~~~--~-----~~~~~f~~~~d~~p~gp~~v~~~~~~~~~~~~YGlGE~~~~l~ 239 (804)
+. ++++++++|++++|+||. |.++ + .|+|.|++|+|+||+||+||++|++|++.+++||++||+++|.
T Consensus 155 ~~--~~~lv~svN~~~~L~fE~~r~K~~~~~e~~~~g~WeE~Fk~~~DskP~Gp~SVglD~sF~~~~~vyGIPEHA~s~~ 232 (915)
T KOG1066|consen 155 FE--DDELVVSVNARGLLNFEHFRTKEEGPEETDENGFWEETFKTHHDSKPHGPESVGLDFSFVGSKNVYGIPEHADSLR 232 (915)
T ss_pred Ee--CCcEEEEEcccceeehhhccccccCccccccccchhhhhhcccCCCCCCCceeEEeEEecccceeecCcccccceE
Confidence 99 789999999999999993 3332 1 3999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCceeeeeccccccCCCCCCCCccceeEEEeeCCCCceEEEEEecCCceEEEecCCCCCccc-ccccC-
Q 003671 240 LKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAES-GILLP- 317 (804)
Q Consensus 240 l~~t~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYgsiPf~~~~~~~~~~~Gvf~~ns~~~~vdi~~~~~~~~~-~~~~~- 317 (804)
||+|+|. ++||||||+|+|+|+.+++|+|||||||+++|++ .+..|+||.|+++|||||..+..+... ++..+
T Consensus 233 Lk~T~g~----~ePYRLyNlDVFEYe~~spmalYGSIP~m~ah~~-~r~~g~fW~NAAeTWVDi~~~t~~~~~s~~~~~~ 307 (915)
T KOG1066|consen 233 LKDTSGG----SEPYRLYNLDVFEYELNSPMALYGSIPFMLAHGP-NRDVGIFWLNAAETWVDIQSSTTDGLFSKMVDPV 307 (915)
T ss_pred eeccCCC----CCceeEeecceEEEecCCcchheecccEEEecCC-CCceeeEEecchhheEEeeccccccccccccccC
Confidence 9999863 6899999999999999999999999999999996 689999999999999999877554222 22222
Q ss_pred ---CcCcccceEEEeecCeEEEEEEecCCHHHHHHHHHHhcCCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCC
Q 003671 318 ---SKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIP 394 (804)
Q Consensus 318 ---~~~~~~~~~~~s~~G~lD~y~f~G~tp~~vi~~Y~~ltG~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP 394 (804)
.+.+.++++|+||+|++|+|+|+||+|.+|++||++|||+++|||++|+|||||||||++|++|.+|.++|++++||
T Consensus 308 ~~s~~~p~~~thw~SEsGiiDvFi~lGP~~~Dv~~qyaaLTG~~~LPplFsiGYHQcRWNY~DE~DV~~Vd~~FDehdiP 387 (915)
T KOG1066|consen 308 SGSQKVPQTDTHWMSESGIIDVFIFLGPKPSDVFRQYAALTGTTPLPPLFSIGYHQCRWNYNDEEDVLTVDQGFDEHDIP 387 (915)
T ss_pred CCCCCCCCccceeeccCCcEEEEEEeCCChhHHHHHHHhhcCCCCCCchhhcchhhccccccchhhhhhhhcCccccCCc
Confidence 12344689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeee
Q 003671 395 YDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWC 474 (804)
Q Consensus 395 ~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~ 474 (804)
+|+|||||+|+|+|+|||||+.+||+|++|+++|+++|+|+|+|||||||.|++|.+++|++++||+||+.+|++|+|||
T Consensus 388 ~DviWLDIEhtdgKrYFTWDk~~FP~P~~Ml~kLa~kgRklV~IvDPHIKkD~~Y~v~ke~~~~gy~VKd~~G~DyeG~C 467 (915)
T KOG1066|consen 388 YDVIWLDIEHTDGKRYFTWDKHKFPNPKDMLKKLASKGRKLVTIVDPHIKKDDGYFVHKEAKDKGYYVKDRDGSDYEGWC 467 (915)
T ss_pred cceEEEeeeecCCceeEeeccccCCCHHHHHHHHHhcCCceEEEeCcccccCCCeEEhHHhhhCCeEEEecCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHH
Q 003671 475 WPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMA 554 (804)
Q Consensus 475 WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~a 554 (804)
|||++.||||+||++|+||+++|.+++|.|++.+.++||||||||+|+|||+|||+|++|+||+|||++||+||++.++|
T Consensus 468 WPG~S~yiDf~nP~~r~wW~~~fafd~y~g~t~nl~iWNDMNEPSVFnGPEiTm~kDaiHyGg~EHRdVHNiYG~~~h~a 547 (915)
T KOG1066|consen 468 WPGSSSYIDFINPEARKWWKSQFAFDRYEGSTPNLFIWNDMNEPSVFNGPEITMPKDAIHYGGWEHRDVHNIYGLMVHMA 547 (915)
T ss_pred cCCCcccccccCHHHHHHHhhhcccccccCCCCceEEeccCCCccccCCCccccchhhhhcCCeeechhhhhhceeeeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCcCchHHHHHHHHHHHHHhccCCCccccccCCCCCCCCHHHHHH
Q 003671 555 TSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVR 634 (804)
Q Consensus 555 t~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~EL~~R 634 (804)
|++||++|.++++||||||||+|||||||||+|||||.++|+|||.||||+|++|++|+||+|||||||+|||++||++|
T Consensus 548 T~dGl~~R~~g~~RPFvLsRafFaGsQR~aAiWTGDN~A~W~HLkiSiPM~Lsl~iaG~~F~GADVgGFFgNPd~ELlvR 627 (915)
T KOG1066|consen 548 TFDGLIARSGGKERPFVLSRAFFAGSQRTAAIWTGDNTADWDHLKISIPMVLSLGIAGMPFVGADVGGFFGNPDPELLVR 627 (915)
T ss_pred hhhhhhhhcCCCcCceEEEeccccCccceeeeeccCCccchhhheeecceeEecccccceecccccccccCCCCHHHHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCccccccccCCCCCCccccc
Q 003671 635 WYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTN 714 (804)
Q Consensus 635 W~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~~fP~D~~~~~~ 714 (804)
|||.|||+||||.|+|++++|||||+|+|++++++|+||+.||+|||||||+|++++.+|.|||||||+|||+|++++.+
T Consensus 628 WYQ~gaf~PFFRaHAHiDTkRREPWLf~e~~~~iiRdal~~RY~lLP~wYTlFye~~~tG~PvmrPl~~e~peD~~~f~i 707 (915)
T KOG1066|consen 628 WYQTGAFQPFFRAHAHIDTKRREPWLFPEQTTQIIRDALRTRYALLPYWYTLFYEHHVTGVPVMRPLFMEFPEDEELFEI 707 (915)
T ss_pred HHHhcccchhhhhhccccccccCccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccchhHhhCccchhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeecCceeEEeeeccCCeeEEEEeCCC--CceEECCCCcEEeCCEEEEEEcCCCCccEEEcCCcEeeeccCCCCchh
Q 003671 715 DEAFMVGNALLVQGVYEERAKHISVYLPGK--ESWYDIRTGARVKGGVTHKLEVSEESVPAFQRPGTIIPRRDRFRRSST 792 (804)
Q Consensus 715 ~~Qfm~G~~lLVaPV~~~g~~~~~vYlP~~--g~Wyd~~t~~~~~gg~~~~v~~pl~~iPvfvR~GsIiP~~~~~~~st~ 792 (804)
|+|||+|+.|||.||+++|+..++||||.+ +.|||+.+++.+.|++++.|+|||++||||+|||+|||+++++|||++
T Consensus 708 D~Q~~vgsgLLVkPV~e~g~~~v~vylP~g~~evwyd~~s~~~~~g~g~~~vpapl~~iPv~qrGGtIip~~~r~RRss~ 787 (915)
T KOG1066|consen 708 DDQFMVGSGLLVKPVTEKGTSEVQVYLPRGKGEVWYDWVSGQEYRGPGTVYVPAPLTSIPVFQRGGTIIPTKDRIRRSSE 787 (915)
T ss_pred cceEEEccccEEeecccCCcceeEEEcCCCCccEEEEcccCceecCCCcEEecCcccccceeeeCceecchHHHHHHhHH
Confidence 999999999999999999999999999933 489999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcEEEEC
Q 003671 793 QMVNDPYTLVRS 804 (804)
Q Consensus 793 ~~~~~p~~L~va 804 (804)
+|++|||||+||
T Consensus 788 lm~~DP~tL~IA 799 (915)
T KOG1066|consen 788 LMKNDPITLFIA 799 (915)
T ss_pred hhccCCeEEEEE
Confidence 999999999997
No 2
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=2.5e-140 Score=1249.25 Aligned_cols=542 Identities=32% Similarity=0.634 Sum_probs=498.4
Q ss_pred EEEEecCCCceeeCCCCCCCCCCCCCCCCCCCCCCceeeeeccccccCCCCCCCCccceeEEEeeCCCCceEEEEEecCC
Q 003671 218 FDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAA 297 (804)
Q Consensus 218 ~~~~~~~~~~~YGlGE~~~~l~l~~t~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYgsiPf~~~~~~~~~~~Gvf~~ns~ 297 (804)
+.++++.++++|||||++++|+++ |++++|||+|.++|..+ ..+||++|||+|+++.++.+||||++|++
T Consensus 66 ~~~~l~~~e~~YGlGE~~g~L~rr---------G~~~~lwN~D~~gy~~~-~~~LY~siPf~l~~~~~g~~yGVf~dns~ 135 (978)
T PLN02763 66 VTFELPSGTSFYGTGEVSGPLERT---------GKRVYTWNTDAWGYGQN-TTSLYQSHPWVFVVLPNGEALGVLADTTR 135 (978)
T ss_pred EEEEcCCCCeEEeCCccCCccccC---------CcEEEEEECCCCccCCC-CCcccccEeEEEEEecCCcEEEEEEeCCC
Confidence 345567889999999999998764 57899999999988644 46899999999998754679999999999
Q ss_pred ceEEEecCCCCCcccccccCCcCcccceEEEeecCeEEEEEE-ec--CCHHHHHHHHHHhcCCCCCCccccccccccccC
Q 003671 298 EMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFF-VG--PGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWN 374 (804)
Q Consensus 298 ~~~vdi~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f-~G--~tp~~vi~~Y~~ltG~p~lpP~walG~~q~rw~ 374 (804)
.++||++.. ....|.+++ |+|++ .| ++|++|+++|++|||+|+|||+||||||||||+
T Consensus 136 ~~~fDlg~~----------------~~~~f~a~~---~y~~i~~G~gptp~eVi~~Yt~LTGrp~mpP~WALGy~qSR~~ 196 (978)
T PLN02763 136 RCEIDLRKE----------------SIIRIIAPA---SYPVITFGPFPSPEALLTSLSHAIGTVFMPPKWALGYQQCRWS 196 (978)
T ss_pred cEEEEEcCC----------------ceEEEEecC---ceEEEEecCCCCHHHHHHHHHHHhCCCCCCchHHhheeeccCC
Confidence 999999632 124566653 66665 56 799999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCccccCCChhhhHH
Q 003671 375 YRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNE 454 (804)
Q Consensus 375 Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~ 454 (804)
|.++++|++++++|++++||||+||+|||||+++++||||+++||||++|+++||++|+|+|+|+||+|+.+++|.+|++
T Consensus 197 Y~sq~eV~eva~~fre~~IP~DvIwlDidYm~g~~~FTwD~~rFPdP~~mv~~Lh~~G~kvv~iidPgI~~d~gY~~y~e 276 (978)
T PLN02763 197 YESAKRVAEIARTFREKKIPCDVVWMDIDYMDGFRCFTFDKERFPDPKGLADDLHSIGFKAIWMLDPGIKAEEGYFVYDS 276 (978)
T ss_pred CCCHHHHHHHHHHHHHcCCCceEEEEehhhhcCCCceeECcccCCCHHHHHHHHHHCCCEEEEEEcCCCccCCCCHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred HHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCcc
Q 003671 455 ATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALH 534 (804)
Q Consensus 455 ~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h 534 (804)
+.++++|||+++|++|.|.||||.++|||||||+|++||.++++.. .. .+++++|+|||||++|++.+.++|.++.|
T Consensus 277 g~~~~~fvk~~~G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l--~d-~GVDG~W~DmnEPa~f~~~~~t~P~~~~h 353 (978)
T PLN02763 277 GCENDVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDF--VS-NGVDGIWNDMNEPAVFKTVTKTMPETNIH 353 (978)
T ss_pred HhhcCeeEECCCCCeeEeeecCCCccccCCCCHHHHHHHHHHHHHH--hc-CCCcEEEccCCCCccccCCcCCCCccccc
Confidence 9999999999999999999999999999999999999999987632 22 56899999999999999888899999999
Q ss_pred CCc------ccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCcCchHHHHHHHHHHHHH
Q 003671 535 LDR------VEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTL 608 (804)
Q Consensus 535 ~~g------~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~ 608 (804)
.++ ..|+++||+||+++++|++++++++. .++|||+||||+|+|+|||+++|+|||.++|++|+.+|+++|++
T Consensus 354 ~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~-~~kRPFilTRSgfaGsQRYaa~WtGDn~SsWe~L~~sI~~~Lnl 432 (978)
T PLN02763 354 RGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLAN-KNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEHLHMSIPMVLQL 432 (978)
T ss_pred cCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhC-CCCCcEEEEccccCcCCCCceEECCCccCCHHHHHHHHHHHHHH
Confidence 864 26999999999999999999998876 45899999999999999999999999999999999999999999
Q ss_pred hccCCCccccccCCCCCCCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHHHH
Q 003671 609 GLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLFR 688 (804)
Q Consensus 609 ~l~G~p~~g~DigGF~g~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~~ 688 (804)
|++|+||||+|||||.|++++|||+||+|+|||+||||+|+..++.+||||.|++++++++|++|++||+|||||||+++
T Consensus 433 gLSGipf~G~DIGGF~G~~~~ELy~RW~Q~GaF~P~fR~Hs~~gt~~qEPW~fgeev~~i~R~ai~LRYrLLPYiYSL~~ 512 (978)
T PLN02763 433 GLSGQPLSGPDIGGFAGDATPKLFGRWMGVGAMFPFARGHSEQGTIDHEPWSFGEECEEVCRLALKRRYRLLPHFYTLFY 512 (978)
T ss_pred HhcCCcccccccCCCCCCCCHHHHHHHHHHhhhhHHhhhccCCCCCCcCCeecChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHcCCccccccccCCCCCCcccccCceeeecCceeEEee-eccCCeeEEEEeCCCCceEECCCCcEEeCCEEEEEEcC
Q 003671 689 EANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGV-YEERAKHISVYLPGKESWYDIRTGARVKGGVTHKLEVS 767 (804)
Q Consensus 689 ~a~~~G~Pi~RPL~~~fP~D~~~~~~~~Qfm~G~~lLVaPV-~~~g~~~~~vYlP~~g~Wyd~~t~~~~~gg~~~~v~~p 767 (804)
+|+.+|.||||||||+||+|++++++++|||+|++|||||| +++|+++|+|||| +|.||||++++...
T Consensus 513 eA~~tG~PImRPL~~efP~D~~a~~iddQFM~G~~LLVAPVv~~~g~tsr~VYLP-~G~WyDf~t~~~~~---------- 581 (978)
T PLN02763 513 KAHTTGLPVMTPIFFADPKDPSLRKVENSFLLGPLLISASTLPDQGSDNLQHVLP-KGIWQRFDFDDSHP---------- 581 (978)
T ss_pred HHHhhCCceeeceecCCCCChHHhccCceEEEcCCeEEcceeccCCceEEEEECC-CCcEEecCCCCccc----------
Confidence 99999999999999999999999999999999999999998 5889999999999 78999999987421
Q ss_pred CCCccEEEcCCcEeeeccCCCCchhhhcCCCcEEEEC
Q 003671 768 EESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYTLVRS 804 (804)
Q Consensus 768 l~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~L~va 804 (804)
+.+|||||+|+|||+++....++...+.+|++|+|+
T Consensus 582 -~~pplfVR~GsIIPl~~~~~~~~e~~~~~~l~L~V~ 617 (978)
T PLN02763 582 -DLPLLYLQGGSIIPLGPPIQHVGEASLSDDLTLLIA 617 (978)
T ss_pred -CCccEEEeCCEEEEeccccccccccccCCceEEEEc
Confidence 345799999999999987666655667899999985
No 3
>PRK10658 putative alpha-glucosidase; Provisional
Probab=100.00 E-value=4.7e-136 Score=1199.53 Aligned_cols=610 Identities=25% Similarity=0.452 Sum_probs=531.6
Q ss_pred cceEEEEEEEEECCEEEEEEecC-CCCCCCCCcccccccccCCcccccceeccccccccCCCCCCeeEeeCCCeEEEEEe
Q 003671 84 INPLILSLSIYQDGIVRLKIDED-PTLNPRKQRFQVPDVVLPQFESKKLYLQRYSKETIDGEGDASVVYLSDGYEAVLRH 162 (804)
Q Consensus 84 ~~~l~l~v~~~~~~~~Rv~I~e~-~~~~~~~~Ry~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~ 162 (804)
...+.++|+...+++|||++... +.. ...+.|++... ......+.+. ++.+++.+.+++++|++
T Consensus 50 ~~~~~~~~~~~~~~iirV~~~~~~~~~-~~~~~~~~~~~-----~~~~~~i~~~---------~~~~~i~s~~l~v~i~~ 114 (665)
T PRK10658 50 TPLFTIRFSSPQEGVIGVRIEHFQGAL-DNGPHFPLNIL-----QDVKVEIEET---------EDYAELKSGNLSARVSK 114 (665)
T ss_pred CCeEEEEEEeccCCeEEEEEECCCCcc-CCCCCceeccC-----CCCceEEEEc---------CCEEEEEeCCEEEEEEc
Confidence 44678899999999999999842 111 12345554321 1111222221 34566777889999997
Q ss_pred c-CcEEEEEEecCCeEEEEeccCCceeeeccccCcchhhhhccccCCCCCCCcceEEEEEecCCCceeeCCCCCCCCCCC
Q 003671 163 D-PFEVYVRYKGGNSRVLSLNSNGLFDFEEKNEGEEWEERFRGHTDTRPYGPQSISFDVSFYDSDYVYGIPERATSFALK 241 (804)
Q Consensus 163 ~-PF~i~v~~~~~~~~~~~~n~~~~~~~e~~~~~~~~~~~f~~~~d~~p~gp~~v~~~~~~~~~~~~YGlGE~~~~l~l~ 241 (804)
+ ||+|+|++ +|++++....++. .+... ..|...+...+.+..+|++|||||+++.|+++
T Consensus 115 ~~~~~i~~~~--~g~~l~~~~~~~~-~~~~~-----------------~~~~~~~~~~~~l~~~E~~yGlGE~~~~l~~~ 174 (665)
T PRK10658 115 GEFWSLDFLR--NGRRLTGSQLKSN-GYVQD-----------------NDGRNYMREQLDLGVGETVYGLGERFTAFVKN 174 (665)
T ss_pred CCCeEEEEEE--CCeEEeeccCccc-ceeec-----------------CCCcEEEEEEEecCCCCeEECCCccCCccccC
Confidence 6 99999995 6665433222221 11100 01122477778888899999999999998753
Q ss_pred CCCCCCCCCCCceeeeeccccccCCCCCCCCccceeEEEeeCCCCceEEEEEecCCceEEEecCCCCCcccccccCCcCc
Q 003671 242 PTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQK 321 (804)
Q Consensus 242 ~t~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYgsiPf~~~~~~~~~~~Gvf~~ns~~~~vdi~~~~~~~~~~~~~~~~~~ 321 (804)
|+.++|||+|.. .+..++|++||||++++ +|||||+|++.+.||++.+ .
T Consensus 175 ---------G~~~~~wn~D~~----~~~~~~Y~~iPf~~s~~----gyGvf~dn~~~~~fd~g~~--------------~ 223 (665)
T PRK10658 175 ---------GQTVDIWNRDGG----TSSEQAYKNIPFYLTNR----GYGVFVNHPQCVSFEVGSE--------------K 223 (665)
T ss_pred ---------CcEEEEEECCCC----CCCccccccccEEEecC----cEEEEEcCCCceEEEEecC--------------c
Confidence 578999999963 34468999999999875 7999999999999999743 1
Q ss_pred ccceEEEeecCeEEEEEEecCCHHHHHHHHHHhcCCCCCCccccccccccc-cCC-CCHHHHHHHHHhhhcCCCCceEEE
Q 003671 322 RIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCR-WNY-RDEEDVEQVDSKFDEHDIPYDVLW 399 (804)
Q Consensus 322 ~~~~~~~s~~G~lD~y~f~G~tp~~vi~~Y~~ltG~p~lpP~walG~~q~r-w~Y-~~~~~v~~v~~~~~~~~iP~D~iw 399 (804)
...+.|.+++|.||+|||.|++|++|+++|++|||+|+|||+||||||||| |.+ .++++|++++++|++++||||+||
T Consensus 224 ~~~~~~~~~g~~ldyy~~~G~tp~~v~~~Yt~LTGrp~lpP~WalG~w~s~~~~~~~~e~~v~~~~~~~r~~~iP~d~i~ 303 (665)
T PRK10658 224 VSKVQFSVEGEYLEYFVIDGPTPKEVLDRYTALTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERDLPLHVFH 303 (665)
T ss_pred cceEEEEecCCcEEEEEEeCCCHHHHHHHHHHHhCCCCCCchhhhheeeecccccCCCHHHHHHHHHHHHHcCCCceEEE
Confidence 234678889999999999999999999999999999999999999999999 333 368899999999999999999999
Q ss_pred eeccccCCC--cceeECCCCCCChHHHHHHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCC
Q 003671 400 LDIEHTDGK--KYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPG 477 (804)
Q Consensus 400 lDi~~~~~~--~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG 477 (804)
+|++||++. ++|+||+++||||++|+++||++|+|+++|++|+|+.+ +++|+|++++|||||+++|+++.+.+|||
T Consensus 304 lD~~w~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~k~~~~i~P~i~~~--s~~f~e~~~~gy~vk~~~G~~~~~~~W~g 381 (665)
T PRK10658 304 FDCFWMKEFQWCDFEWDPRTFPDPEGMLKRLKAKGLKICVWINPYIAQK--SPLFKEGKEKGYLLKRPDGSVWQWDKWQP 381 (665)
T ss_pred EchhhhcCCceeeeEEChhhCCCHHHHHHHHHHCCCEEEEeccCCcCCC--chHHHHHHHCCeEEECCCCCEeeeeecCC
Confidence 999999874 58999999999999999999999999999999999864 58999999999999999999999999999
Q ss_pred CcccccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHH
Q 003671 478 SSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSD 557 (804)
Q Consensus 478 ~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~ 557 (804)
.+++||||||+|++||.++++... ..++++||+||||+ +|.|+.|++|..|+++||+|++++++|+++
T Consensus 382 ~~~~~Dftnp~ar~W~~~~~~~l~---d~Gvdgfw~D~gE~---------~p~d~~~~~G~~~~~~hN~Y~~l~~ka~~e 449 (665)
T PRK10658 382 GMAIVDFTNPDACKWYADKLKGLL---DMGVDCFKTDFGER---------IPTDVVWFDGSDPQKMHNYYTYLYNKTVFD 449 (665)
T ss_pred CceeecCCCHHHHHHHHHHHHHHH---hcCCcEEEecCCce---------eeccceecCCCcHHHhcchhHHHHHHHHHH
Confidence 999999999999999999986422 24689999999994 578999999999999999999999999999
Q ss_pred HHHHhcCCCCCCeEEeccccCCCCcccccccCCCcCchHHHHHHHHHHHHHhccCCCccccccCCCCCCCCHHHHHHHhh
Q 003671 558 GLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQ 637 (804)
Q Consensus 558 ~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~EL~~RW~Q 637 (804)
++++.. +++|||++|||+|+|+|||+++|+|||.|+|++|+.+|+++|++|+||+||||+|||||.|+|++|||+||+|
T Consensus 450 ~l~~~~-~~~r~~i~tRs~~aGsQry~~~WsGD~~stw~~l~~si~~~Ls~glsG~~~~g~DIGGF~g~~~~ELy~RW~Q 528 (665)
T PRK10658 450 VLKETR-GEGEAVLFARSATVGGQQFPVHWGGDCYSNYESMAESLRGGLSLGLSGFGFWSHDIGGFENTATADVYKRWCA 528 (665)
T ss_pred HHHHhc-CCCceEEEEecccCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHhcCCccccCccCCCCCCCCHHHHHHHHH
Confidence 998875 5689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCccccccccCCCCCCcccccCce
Q 003671 638 LGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEA 717 (804)
Q Consensus 638 ~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~Q 717 (804)
+|+|+|+||+|+.. ..||||.|++++.+++|+++++||+|||||||++++|+++|.||||||++|||+|++++++++|
T Consensus 529 ~g~f~P~~R~Hg~~--~~~ePW~fg~e~~~i~r~~i~lRy~LlPYlYs~~~~a~~~G~PimRPL~~efP~D~~~~~~~~q 606 (665)
T PRK10658 529 FGLLSSHSRLHGSK--SYRVPWAYDEEAVDVVRFFTKLKCRLMPYLYREAAEAHERGTPMMRAMVLEFPDDPACDYLDRQ 606 (665)
T ss_pred hcccChhhcccCCC--CCcCCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhccCCCChHHhcCCCc
Confidence 99999999999864 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCceeEEeeeccCCeeEEEEeCCCCceEECCCCcEEeCCEEEEEEcCCCCccEEEcCC
Q 003671 718 FMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVKGGVTHKLEVSEESVPAFQRPG 778 (804)
Q Consensus 718 fm~G~~lLVaPV~~~g~~~~~vYlP~~g~Wyd~~t~~~~~gg~~~~v~~pl~~iPvfvR~G 778 (804)
||+|++||||||+++++ +|+|||| +|.|||+|||++++||+++++++||++||||||+|
T Consensus 607 fmlG~~lLVAPV~~~~~-~r~VYLP-~G~W~d~~tg~~~~Gg~~i~~~~~l~~iPvfvR~G 665 (665)
T PRK10658 607 YMLGDSLLVAPVFSEAG-DVEYYLP-EGRWTHLLTGEEVEGGRWHKEQHDFLSLPLLVRPN 665 (665)
T ss_pred eEecCCeEEeEeecCCc-eEEEEcC-CCeEEEccCCcEEECCEEEEEeCCCccCCEEEcCC
Confidence 99999999999999996 7999999 78999999999999999999999999999999998
No 4
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-136 Score=1207.82 Aligned_cols=547 Identities=40% Similarity=0.748 Sum_probs=511.2
Q ss_pred CCcceEEEEEecCCCceeeCCCCCCCCCCCCCCCCCCCCCCceeeeeccccccCCCCCCCCccceeEEEeeCCCCceEEE
Q 003671 212 GPQSISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGF 291 (804)
Q Consensus 212 gp~~v~~~~~~~~~~~~YGlGE~~~~l~l~~t~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYgsiPf~~~~~~~~~~~Gv 291 (804)
|.+++...+.+..++++||||||+.++.. .+++|++||.|+.++...+.+++|.+||||++.+ ++|+
T Consensus 139 ~~~~~~~~~~~~~~e~~yGlge~~~~l~~---------~~~~~~~wn~D~~~~~~~~~~~~y~~iPf~~s~~----gyg~ 205 (772)
T COG1501 139 GGGYVFLYFDLGGGEHVYGLGERAGGLGR---------NGQTYRLWNADAGTYTGGDYDNLYASIPFYLSSR----GYGL 205 (772)
T ss_pred CCccEEEEEEecCCceEeecccccccccc---------CcceEEeeecCCCcccccccccccccCCEEEEcc----ceEE
Confidence 66789999999999999999999999843 2568999999999998888899999999999984 7999
Q ss_pred EEecCCceEEEecCCCCCcccccccCCcCcccceEEEeecCeEEEEEEecCCHHHHHHHHHHhcCCCCCCcccccc-ccc
Q 003671 292 FWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIA-YHQ 370 (804)
Q Consensus 292 f~~ns~~~~vdi~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~tp~~vi~~Y~~ltG~p~lpP~walG-~~q 370 (804)
||+|++.+.||++.. ......|.+++|.|||||+.|+++++|+++|++|||||+|||+|||| +|+
T Consensus 206 ~~~n~~~~~fd~~~~--------------~~~~~~~~~e~~~ldyyv~~G~~~~~vi~~yt~lTGkp~l~P~Wa~G~~~~ 271 (772)
T COG1501 206 FVDNSAYGSFDVGSE--------------EYSYVQFSVEGGQLDYYVIAGPTPKDVLEKYTDLTGKPPLPPKWALGWLWT 271 (772)
T ss_pred EEECCCceEEEcCCc--------------ceEEEEEEecCCcEEEEEEeCCCHHHHHHHHHHhhCCCCCCCceecCCCce
Confidence 999999999999742 23346678899999999999999999999999999999999999999 999
Q ss_pred cccCCCCHHHHHHHHHhhhcCCCCceEEEeecc-ccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCccccCCCh
Q 003671 371 CRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIE-HTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSY 449 (804)
Q Consensus 371 ~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~-~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~y 449 (804)
||+.|.+|++|.++++.+++++||||+||||++ ||+++++|+||+.+||+|++|+++||++|+|+++||+|+|+.++
T Consensus 272 ~~~~~~~e~~v~~~i~~~~~~~IP~d~~~lD~~~~~~~~~~F~wd~~~FP~pk~mi~~l~~~Gikl~~~i~P~i~~d~-- 349 (772)
T COG1501 272 SRYTYYDEDEVLEFIDEMRERDIPLDVFVLDIDFWMDNWGDFTWDPDRFPDPKQMIAELHEKGIKLIVIINPYIKQDS-- 349 (772)
T ss_pred eccccccHHHHHHHHhhcccccCcceEEEEeehhhhccccceEECcccCCCHHHHHHHHHhcCceEEEEeccccccCC--
Confidence 999999999999999999999999999999998 99999999999999999999999999999999999999999887
Q ss_pred hhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCC
Q 003671 450 WLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMP 529 (804)
Q Consensus 450 ~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~ 529 (804)
++|++++++|||||+++|+.+.+.+|||.++++|||||+||+||++... +.....++++||+|||||++|++.
T Consensus 350 ~~~~e~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~--~~l~d~Gv~g~W~D~nEp~~~~~~----- 422 (772)
T COG1501 350 PLFKEAIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKK--KNLLDLGVDGFWNDMNEPEPFDGD----- 422 (772)
T ss_pred chHHHHHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHH--hHHHhcCccEEEccCCCCcccccc-----
Confidence 7899999999999999999999999999999999999999999995321 222346799999999999998764
Q ss_pred CCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCcCchHHHHHHHHHHHHHh
Q 003671 530 RDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLG 609 (804)
Q Consensus 530 ~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~ 609 (804)
.+++|..|+++||+|++++++|+++|+++.. +++|||+||||+|+|+|||+++|+|||.++|++|+.+|+++|++|
T Consensus 423 ---~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~~-~~~r~~~lsRsg~aG~Q~~~~~WsGD~~s~wd~l~~si~~~Ls~~ 498 (772)
T COG1501 423 ---GFGNGIDHEEMHNLYPLLYAKAVYEALKELG-GNERPFILSRSGYAGSQRYAAHWSGDNRSSWDSLRESIPAGLSLS 498 (772)
T ss_pred ---ccccccCHHHHhcchhHHHHHHHHHHHHhhc-CCCceEEEEecccccceeccceeCCccccchHHHHhhHHhhhchh
Confidence 5778899999999999999999999999886 569999999999999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCC--CCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHHH
Q 003671 610 LTGMSFSGADVGGFFG--NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLF 687 (804)
Q Consensus 610 l~G~p~~g~DigGF~g--~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~ 687 (804)
++|+||||+|||||.| +|++|||+||+|+|+|+|+||.|++ ++++||||.|++++.+++|+++++||+|||||||++
T Consensus 499 ~sGi~~wg~DiGGF~g~~~~~~EL~~RW~q~g~F~P~~R~H~~-d~~~rePW~~~e~~~~i~r~~~~lR~~LlPYiYt~~ 577 (772)
T COG1501 499 LSGIPFWGHDIGGFTGGDDPTAELYIRWYQFGAFSPIFRLHGN-DNIPREPWAFGEETEEIVREYIQLRYRLLPYIYTLA 577 (772)
T ss_pred ccCCccccccccccCCCCCCCHHHHHHHHHHHhcCchhhhhCC-CCCCCCCccCChhHHHHHHHHHHHHHccchHHHHHH
Confidence 9999999999999999 7899999999999999999999998 789999999999999999999999999999999999
Q ss_pred HHHHHcCCccccccccCCCCCCcccccCceeeecCceeEEeeeccCCeeEEEEeCCCCceEECCCCcEEeCCEEEEEEcC
Q 003671 688 REANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVKGGVTHKLEVS 767 (804)
Q Consensus 688 ~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~Qfm~G~~lLVaPV~~~g~~~~~vYlP~~g~Wyd~~t~~~~~gg~~~~v~~p 767 (804)
.+|+++|.|||||||++||+|+++++++||||+|++||||||+++|+++|+|||| +|.|||+|||+.++||+++++.||
T Consensus 578 ~~a~~tG~P~mRplf~~fp~D~~~~~iddqym~G~~lLVAPV~~eg~~~r~vyLP-~g~W~d~~tg~~~~Gg~~i~~~ap 656 (772)
T COG1501 578 AEASETGLPMMRPLFLEFPEDETTYNLDDQYMFGDDLLVAPVVEEGQTSREVYLP-EGTWYDFWTGEEYEGGQTITVEAP 656 (772)
T ss_pred HHHhccCCcceehhheeCCCChhhhhcccceecccceEEeeccccCcceEEEECC-CceEEEccCCCEEeCCeeEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999 899999999999999999999999
Q ss_pred CCCccEEEcCCcEeeeccCCCCchhhhcCCCcE
Q 003671 768 EESVPAFQRPGTIIPRRDRFRRSSTQMVNDPYT 800 (804)
Q Consensus 768 l~~iPvfvR~GsIiP~~~~~~~st~~~~~~p~~ 800 (804)
+++||||||+|+|||++....+.-.....++.-
T Consensus 657 l~~iPvfvR~Gsiip~~~~~~~~~~~~~~~~~~ 689 (772)
T COG1501 657 LETIPVFVRAGSIIPLLENELYVGESYVEDVAF 689 (772)
T ss_pred ccCCceEEecCceeecccchhhccccccCCceE
Confidence 999999999999999998766554444444433
No 5
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-132 Score=1141.06 Aligned_cols=647 Identities=32% Similarity=0.599 Sum_probs=573.3
Q ss_pred ceEeeeeEEEcCCCcEEEEEecC---CCCCCCCcceEEEEEEEEECCEEEEEEecCCCCCCCCCcccccccccCCccccc
Q 003671 54 CSLIANQVTISDDGDISAKLVPK---NHDDHHQINPLILSLSIYQDGIVRLKIDEDPTLNPRKQRFQVPDVVLPQFESKK 130 (804)
Q Consensus 54 y~~~~~sv~~~~~~~~~a~l~~~---~~~~~~~~~~l~l~v~~~~~~~~Rv~I~e~~~~~~~~~Ry~v~~~l~~~~~~~~ 130 (804)
|.|.+.+++.+ .++++|.|.+. ++.++.+...+.+++.+.+.+++||+|++. +.+||++|...+++...
T Consensus 59 ~gY~~~~~~~~-t~~~~a~l~~~~~~~~~~~~d~~~~~l~~~~~T~~r~~i~i~d~-----~~~r~e~p~~~~~~~~~-- 130 (805)
T KOG1065|consen 59 YGYQAESMQVS-TSGQTAKLNNLDPSNPIYGTDIKSLLLTVSYETVERLHIKITDL-----NNQRWEVPHVTIRRVEG-- 130 (805)
T ss_pred CceEEEecccc-cceEEEEeeccCCCcccccCCccceEeeeecccceeeEEeecCc-----CCCceecccccccceec--
Confidence 66777787776 66999999875 344688999999999999999999999984 89999999864433110
Q ss_pred ceeccccccccCCCCCCeeEeeCCCeEEEEEecCcEEEEEEecCCeEEEEeccCCceeeeccccCcchhhhhccccCCCC
Q 003671 131 LYLQRYSKETIDGEGDASVVYLSDGYEAVLRHDPFEVYVRYKGGNSRVLSLNSNGLFDFEEKNEGEEWEERFRGHTDTRP 210 (804)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~PF~i~v~~~~~~~~~~~~n~~~~~~~e~~~~~~~~~~~f~~~~d~~p 210 (804)
+. .+..+.++.+||++.|.|+++|++.+... -+.+.|+ +||.+.+
T Consensus 131 ----~s-----------------~~~~~~~s~~pF~f~v~R~s~g~~lfdTs-~~~liF~---------DQflqls---- 175 (805)
T KOG1065|consen 131 ----RS-----------------HNSPVSFSTGPFSFSVTRWSDGRVLFDTS-IGPLIFE---------DQFLQLS---- 175 (805)
T ss_pred ----cc-----------------cCCCcccccCCeEEEEEEecCCceeeecC-CCceeee---------eeeeeee----
Confidence 00 01116778899999999999988644332 3445666 4665444
Q ss_pred CCCcceEEEEEecCCCceeeCCCCCCCCCCCCCCCCCCCCCCceeeeeccccccCCCCCCCCccceeEEEeeCCCCceEE
Q 003671 211 YGPQSISFDVSFYDSDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSG 290 (804)
Q Consensus 211 ~gp~~v~~~~~~~~~~~~YGlGE~~~~l~l~~t~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYgsiPf~~~~~~~~~~~G 290 (804)
..+|+...+||+|||...--++.. ++++|.||++|...- ....+|||+|||||+.+.++.++|
T Consensus 176 ---------T~LPs~~~iyG~gE~~~~~~~~~~------~~~t~~l~~rd~~p~--~~~~NLYGshPfymcle~~~~~~G 238 (805)
T KOG1065|consen 176 ---------TYLPSENEIYGLGEHTHQSYRHDM------NNLTWTLFARDYSPN--LPGVNLYGSHPFYLCLEDDSGAHG 238 (805)
T ss_pred ---------ccCCCcccccccccccchhhhccc------CCceeeeeecccCCC--CCcccccccccceeEeeccCCCce
Confidence 445544459999998653223333 367999999998752 345789999999999988788999
Q ss_pred EEEecCCceEEEecCCCCCcccccccCCcCcccceEEEeecCeEEEEEEecCCHHHHHHHHHHhcCCCCCCccccccccc
Q 003671 291 FFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQ 370 (804)
Q Consensus 291 vf~~ns~~~~vdi~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~tp~~vi~~Y~~ltG~p~lpP~walG~~q 370 (804)
||++||+.|+|.+. +...+.|+++||++|+|+|+||+|+.|++||.+++|+|.|||+|+||||+
T Consensus 239 VflLnSNamEv~~~----------------p~p~L~YR~iGGilD~y~flGptPe~vvqQy~q~iG~P~m~pYWslGf~~ 302 (805)
T KOG1065|consen 239 VFLLNSNAMEVTLR----------------PGPSLTYRTIGGILDFYVFLGPTPEGVVQQYLQLIGRPAMPPYWSLGFQL 302 (805)
T ss_pred EEEeccCCceEEec----------------cCCeeEEEeecceEEEEEecCCChHHHHHHHHHHhCCccCCchhhcccee
Confidence 99999999999884 34568999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCccccCCChh
Q 003671 371 CRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYW 450 (804)
Q Consensus 371 ~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~y~ 450 (804)
|||+|.+.+++++|+++++++|||+|++|.|||||+++++||.|+.+||+.+++++.||++|+|+|+|+||+|..+..|.
T Consensus 303 ~RwgY~nls~~~dvv~~~~~agiPld~~~~DiDyMd~ykDFTvd~~~fp~~~~fv~~Lh~~G~kyvliidP~is~~~~y~ 382 (805)
T KOG1065|consen 303 CRWGYKNLSVVRDVVENYRAAGIPLDVIVIDIDYMDGYKDFTVDKVWFPDLKDFVDDLHARGFKYVLIIDPFISTNSSYG 382 (805)
T ss_pred cccccccHHHHHHHHHHHHHcCCCcceeeeehhhhhcccceeeccccCcchHHHHHHHHhCCCeEEEEeCCccccCccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999899
Q ss_pred hhHHHHHcCceEEcCCCCC-eeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCC
Q 003671 451 LHNEATEKGYYVKDATKRD-YDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMP 529 (804)
Q Consensus 451 ~~~~~~~~~~~vk~~~g~~-~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~ 529 (804)
.|++|.+++++|++.+|+. +.|.+|||.++||||+||++..||.++++ .++...++|++|+||||+++|+.|- .
T Consensus 383 ~y~~g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDftnp~~~~Ww~~~~~--~fh~~vp~dg~wiDmnE~snf~~pp---~ 457 (805)
T KOG1065|consen 383 PYDRGVAKDVLIKNREGSPKMLGEVWPGSTAFPDFTNPAVVEWWLDELK--RFHDEVPFDGFWIDMNEPSNFPSPP---I 457 (805)
T ss_pred hhhhhhhhceeeecccCchhhhcccCCCcccccccCCchHHHHHHHHHH--hhcccCCccceEEECCCcccCCCCC---c
Confidence 9999999999999999998 99999999999999999999999999987 4566778999999999999998532 1
Q ss_pred CCCccCCcc--cchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCcCchHHHHHHHHHHHH
Q 003671 530 RDALHLDRV--EHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILT 607 (804)
Q Consensus 530 ~d~~h~~g~--~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~ 607 (804)
.+..+.+.. .-++.||+||+.++.|+++++.+.. + +|+|+++||+|+|++||++||+|||.++|+.|+.+|++||.
T Consensus 458 ~~~~~~~~~~~~tyd~~~lyg~~~aiat~~a~~~v~-~-kr~~i~srsTf~g~g~y~~hwlgdn~~~w~~L~~sI~gml~ 535 (805)
T KOG1065|consen 458 NPTLDNGDLYAKTYDTHNLYGYSEAIATHQALVDVP-G-KRSFILSRSTFVGSGRYAGHWLGDNTARWEDLQTSISGMLE 535 (805)
T ss_pred ccccccccccccchhhhhhHhHHHhhhhhccceecc-c-cccccccccceecccccceeecccccceehhccccchhhhc
Confidence 122222211 1288999999999999999998885 4 99999999999999999999999999999999999999999
Q ss_pred HhccCCCccccccCCCCCCCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHHH
Q 003671 608 LGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLF 687 (804)
Q Consensus 608 ~~l~G~p~~g~DigGF~g~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~ 687 (804)
++++|+|++|+|||||.|.++||||.||+|+|||+||||+|+..+..++||+.|+. +.++.|+++-+||++|||+||++
T Consensus 536 fnl~Gip~Vg~Dicgf~~~~~eELc~RW~q~gaF~Pf~R~hn~~~~~~qe~~~~~s-v~~a~r~~~~~ry~~lP~lytl~ 614 (805)
T KOG1065|consen 536 FNLFGIPMVGSDICGFLGPPTEELCLRWLQLGAFYPFSRNHNSPGEPRQEPYTWSS-VAEAARNALTLRYTLLPYLYTLF 614 (805)
T ss_pred ccccCCCccchhhhcCCCCCCHHHHHHHHHhccCCchhhccCCCCCcccChhhHHH-HHHHHHHhhhheeeehhhHHHhh
Confidence 99999999999999999999999999999999999999999999999999999976 89999999999999999999999
Q ss_pred HHHHHcCCccccccccCCCCCCcccccCceeeecCceeEEeeeccCCeeEEEEeCCCCceEECCCCcEEeCCEEE-EEEc
Q 003671 688 REANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVKGGVTH-KLEV 766 (804)
Q Consensus 688 ~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~Qfm~G~~lLVaPV~~~g~~~~~vYlP~~g~Wyd~~t~~~~~gg~~~-~v~~ 766 (804)
++||..|.||.||||++||+|++++.+++|||+|++|||+||+++|+++|++||| .|.|||..++....++++. +..+
T Consensus 615 ~~A~~sG~pV~RPlf~~fP~D~~~~~v~~qFl~G~~llvaPvl~~g~~~v~~y~P-~g~Wyd~~~~~~~~~~~~~~~~~~ 693 (805)
T KOG1065|consen 615 YRAHVSGEPVARPLFFEFPTDPATLIVSDQFLWGESLLVAPVLYQGATEVEAYLP-QGVWYDGFDGSYRVGSKWMVTYAA 693 (805)
T ss_pred hhhhhcCCcceeeeeeecCCChhhhcccceeEeccccccccchhcCceEEEEEcc-CceeeecCCcceEeeeecccccCC
Confidence 9999999999999999999999999999999999999999999999999999999 8999999999999888764 6789
Q ss_pred CCCCccEEEcCCcEeeecc
Q 003671 767 SEESVPAFQRPGTIIPRRD 785 (804)
Q Consensus 767 pl~~iPvfvR~GsIiP~~~ 785 (804)
|+++||+|+|+|.|||+|+
T Consensus 694 p~d~i~v~~r~g~ilp~q~ 712 (805)
T KOG1065|consen 694 PLDKIPVFLRGGYILPMQQ 712 (805)
T ss_pred chhhccchhccCceeeecc
Confidence 9999999999999999997
No 6
>PRK10426 alpha-glucosidase; Provisional
Probab=100.00 E-value=4.8e-126 Score=1112.71 Aligned_cols=537 Identities=23% Similarity=0.377 Sum_probs=475.3
Q ss_pred CCCCCCcceEEEEEecCCCceeeCCCCCCCCCCCCCC------CCCCCC-CCceeeeeccccccCCCCCCCCccceeEEE
Q 003671 208 TRPYGPQSISFDVSFYDSDYVYGIPERATSFALKPTR------GPNVEE-SEPYRLFNLDVFEYLHDSPFGLYGSIPFMI 280 (804)
Q Consensus 208 ~~p~gp~~v~~~~~~~~~~~~YGlGE~~~~l~l~~t~------g~~~~~-~~~y~l~n~D~~~~~~~~~~~lYgsiPf~~ 280 (804)
..|..-..+.+.+.+..+|++|||||+++.|+++..+ .++..+ .++|+.||.|...+..++.+++|++|||||
T Consensus 64 ~~~~~~~~~~~~~~~~~~E~~yGlGE~~~~l~~rG~~~~~w~~d~~~g~~~~~~~~~~~d~~~~~gg~~~~tY~~iPf~i 143 (635)
T PRK10426 64 KIALTDNRIWLRLAADPDEHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWTYFPQPTFV 143 (635)
T ss_pred eecccCcEEEEEEecCCCCeEECCCcCCChHhhCCCEEeeeecccccCcCccccccccccccccccCccccccceeCEEE
Confidence 4455567899999999999999999999999987432 111111 235555666655555566788999999999
Q ss_pred eeCCCCceEEEEEecCCceEEEecCCCCCcccccccCCcCcccceEEEeecCeEEEEEEecCCHHHHHHHHHHhcCCCCC
Q 003671 281 SHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSM 360 (804)
Q Consensus 281 ~~~~~~~~~Gvf~~ns~~~~vdi~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~lD~y~f~G~tp~~vi~~Y~~ltG~p~l 360 (804)
+++ +|||||+|++.+.||++.+. .. .+...+|.+|+|||.|++|++|+++|++|||||+|
T Consensus 144 Ss~----~ygv~~dn~~~~~fd~~~~~--------------~~--~~~~~~~~~d~y~~~G~~~~~vi~~yt~ltGr~p~ 203 (635)
T PRK10426 144 SSQ----KYYCHVDNSAYMNFDFSAPE--------------YH--ELELWEDKATLRFECADTYISLLEKLTALFGRQPE 203 (635)
T ss_pred EcC----CEEEEEcCCCcEEEEecCCC--------------cc--EEEEEeCCeeEEEEeCCCHHHHHHHHHHhhCCCCC
Confidence 975 59999999999999997431 11 12234689999999999999999999999999999
Q ss_pred Cccccc-cccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCC------Cc---ceeECCCCCCChHHHHHHHHH
Q 003671 361 PPLFSI-AYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDG------KK---YFTWDRLSFPHPEEMQRKLAT 430 (804)
Q Consensus 361 pP~wal-G~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~------~~---~ft~d~~~FP~p~~m~~~L~~ 430 (804)
||+||| |+|++.. .++++|++++++|++++||||+||+| +|++. ++ +|+||+++||||++|+++||+
T Consensus 204 ~P~Wal~G~~~g~~--~~~~~v~~v~~~~r~~~IP~d~i~ld-dw~~~~~~~~g~~~~~~~~~d~~~FPdp~~mi~~L~~ 280 (635)
T PRK10426 204 LPDWAYDGVTLGIQ--GGTEVVQKKLDTMRNAGVKVNGIWAQ-DWSGIRMTSFGKRLMWNWKWDSERYPQLDSRIKQLNE 280 (635)
T ss_pred CChhhccCcccccc--CCHHHHHHHHHHHHHcCCCeeEEEEe-cccccccccccccccccceEChhhCCCHHHHHHHHHH
Confidence 999999 9997643 35789999999999999999999999 77532 22 479999999999999999999
Q ss_pred cCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcce
Q 003671 431 KGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLY 510 (804)
Q Consensus 431 ~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~ 510 (804)
+|+|+++|+||+|+. +|++|+||.++|||||+.+|++|.+.+|||.+++||||||+|++||+++++.. .-..++++
T Consensus 281 ~G~k~v~~i~P~v~~--~~~~y~e~~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~--~~~~Gvdg 356 (635)
T PRK10426 281 EGIQFLGYINPYLAS--DGDLCEEAAEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEAYEWFKEVIKKN--MIGLGCSG 356 (635)
T ss_pred CCCEEEEEEcCccCC--CCHHHHHHHHCCcEEECCCCCEEEeEecCCCceeecCCCHHHHHHHHHHHHHH--HhhcCCCE
Confidence 999999999999997 46899999999999999999999999999999999999999999999987531 22256899
Q ss_pred EeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccc-cccC
Q 003671 511 IWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA-VWTG 589 (804)
Q Consensus 511 ~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~-~WtG 589 (804)
+|+||||+ +|.|+.|++|..++++||+||++++++++|++++.. ..+|||+||||+|+|+|||++ +|+|
T Consensus 357 ~w~D~~E~---------~p~d~~~~~g~~~~~~hN~Y~~l~~~~~~e~~~~~~-~~~r~f~ltRsg~aGsQry~~~~WsG 426 (635)
T PRK10426 357 WMADFGEY---------LPTDAYLHNGVSAEIMHNAWPALWAKCNYEALEETG-KLGEILFFMRAGYTGSQKYSTLFWAG 426 (635)
T ss_pred EeeeCCCC---------CCCcceeeCCCCHHHhccHHHHHHHHHHHHHHHHhc-CCCCcEEEEccccCCcCCccccccCC
Confidence 99999994 678999999999999999999999999999998874 347999999999999999986 8999
Q ss_pred CCcCchH---HHHHHHHHHHHHhccCCCccccccCCCCC----CCCHHHHHHHhhcccccccccccCCCCCCCCCccccC
Q 003671 590 DNTAEWE---QLRVSVPMILTLGLTGMSFSGADVGGFFG----NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFG 662 (804)
Q Consensus 590 Dn~s~W~---~L~~si~~~L~~~l~G~p~~g~DigGF~g----~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~ 662 (804)
||.++|+ +|+.+|+++|++|++|+||+|+|||||.+ ++++|||+||+|+|||+|+||+|++. .++|||.|+
T Consensus 427 D~~ssW~~~d~L~~~I~~~Ls~glsG~~~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~--~~~epw~f~ 504 (635)
T PRK10426 427 DQNVDWSLDDGLASVVPAALSLGMSGHGLHHSDIGGYTTLFGMKRTKELLLRWCEFSAFTPVMRTHEGN--RPGDNWQFD 504 (635)
T ss_pred CCCCcCcChhHHHHHHHHHHHHHhcCcCccccccCCCcCcCCCCCCHHHHHHHHHHhcCCceeecCCCC--CCCCCCCCC
Confidence 9999995 89999999999999999999999999974 58999999999999999999999853 679999995
Q ss_pred h--hHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCccccccccCCCCCCcccccCceeeecCceeEEeeeccCCeeEEEE
Q 003671 663 E--RNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAKHISVY 740 (804)
Q Consensus 663 ~--~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~Qfm~G~~lLVaPV~~~g~~~~~vY 740 (804)
+ ++.+.+++++++||+|+|||||++++|+++|.|||||||++||+|+.++++++|||+|++||||||+++|+++|+||
T Consensus 505 ~~~~~~~~~~~~~~lRy~LlPYlytl~~~a~~tG~Pi~RPL~~~fP~D~~~~~i~~qfm~G~~LLVAPV~~~g~~~r~VY 584 (635)
T PRK10426 505 SDAETIAHFARMTRVFTTLKPYLKELVAEAAKTGLPVMRPLFLHYEDDAATYTLKYQYLLGRDLLVAPVHEEGRTDWTVY 584 (635)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccCCCChHHhcCCcceEecCCeEEeeeccCCceEEEEE
Confidence 4 56677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceEECCCCcEEeCCEEEEEEcCCCCccEEEcCCcEeeecc
Q 003671 741 LPGKESWYDIRTGARVKGGVTHKLEVSEESVPAFQRPGTIIPRRD 785 (804)
Q Consensus 741 lP~~g~Wyd~~t~~~~~gg~~~~v~~pl~~iPvfvR~GsIiP~~~ 785 (804)
|| +|.|||+|||++++|| ++++++||++||||||+|+||+..-
T Consensus 585 LP-~g~W~d~~tg~~~~Gg-~i~v~apl~~iPvFvR~Gsi~~~~~ 627 (635)
T PRK10426 585 LP-EDKWVHLWTGEAFAGG-EITVEAPIGKPPVFYRAGSEWASLF 627 (635)
T ss_pred CC-CCcEEECCCCCEEECC-EEEEeCCCCCcCEEEECCeEhHHHh
Confidence 99 7999999999999999 9999999999999999999998653
No 7
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=100.00 E-value=8.9e-114 Score=982.20 Aligned_cols=440 Identities=43% Similarity=0.882 Sum_probs=399.6
Q ss_pred EEEecCCHHHHHHHHHHhcCCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCC
Q 003671 337 FFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRL 416 (804)
Q Consensus 337 y~f~G~tp~~vi~~Y~~ltG~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~ 416 (804)
|||.|++|++|+++|++|||||+|||+|+||+|+|||+|.++++|+++++++++++||||++|+|++|+.++++|+||++
T Consensus 1 y~~~G~~~~~v~~~y~~ltG~~~~pP~walG~~~~~~~~~~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~~~~~f~~d~~ 80 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTELTGRPPLPPRWALGFWQSRWGYYNQDEVREVIDRYRSNGIPLDVIWIDDDYQDGYGDFTWDPE 80 (441)
T ss_dssp EEEEESSHHHHHHHHHHHHSSS----GGGGSEEEEESTBTSHHHHHHHHHHHHHTT--EEEEEE-GGGSBTTBTT-B-TT
T ss_pred CEEeCcCHHHHHHHHHHHHCCCCCCchhhhceEeecCcCCCHHHHHHHHHHHHHcCCCccceeccccccccccccccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHcCCeEEEEecCccccCCC-hhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHh
Q 003671 417 SFPHPEEMQRKLATKGRHMVTIVDPHIKRDDS-YWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGT 495 (804)
Q Consensus 417 ~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~-y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~ 495 (804)
+||||++|++.||++|+|+++|++|+|..++. |..|+++.++|++||+++|+++.+.+|||.+++|||+||++++||++
T Consensus 81 ~FPd~~~~~~~l~~~G~~~~~~~~P~v~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~ 160 (441)
T PF01055_consen 81 RFPDPKQMIDELHDQGIKVVLWVHPFVSNDSPDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGFIDFTNPEARDWWKE 160 (441)
T ss_dssp TTTTHHHHHHHHHHTT-EEEEEEESEEETTTTB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEEB-TTSHHHHHHHHH
T ss_pred cccchHHHHHhHhhCCcEEEEEeecccCCCCCcchhhhhHhhcCceeecccCCcccccccCCcccccCCCChhHHHHHHH
Confidence 99999999999999999999999999998876 88999999999999999999999999999999999999999999998
Q ss_pred hcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEecc
Q 003671 496 KFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARA 575 (804)
Q Consensus 496 ~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS 575 (804)
+++. .....+++++|+|||||+.|. .+.+++.|+.|.++..++++||+|++++++++++++++.. +++|||++|||
T Consensus 161 ~~~~--~~~~~Gvdg~w~D~~E~~~~~-~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~-~~~r~~~~sRs 236 (441)
T PF01055_consen 161 QLKE--LLDDYGVDGWWLDFGEPSSFD-SNNTLPEDAVHHDGYSGYEMHNLYGLLYAKATYEALREID-PNKRPFIFSRS 236 (441)
T ss_dssp HHHH--HHTTST-SEEEEESTTTBSST-TTBSBCTTEECTTECEHHHHGGGHHHHHHHHHHHHHHHHS-TTSC-EEEESS
T ss_pred HHHH--HHhccCCceEEeecCCccccc-ccccCcccceecCCCCchheeccccccchhhhhhhhhhcc-CCCCcceeecc
Confidence 8764 334457999999999999987 6678899999999999999999999999999999998864 55999999999
Q ss_pred ccCCCCcccccccCCCcCchHHHHHHHHHHHHHhccCCCccccccCCCCCCCCHHHHHHHhhcccccccccccCCCCCCC
Q 003671 576 FFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKR 655 (804)
Q Consensus 576 ~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~ 655 (804)
+++|+|||+++|+||+.++|++|+.+|+++|++|++|+||+|+|||||.+.+++|||+||+|+|+|+|+||+|+..+..+
T Consensus 237 ~~~G~qr~~~~w~GD~~s~w~~L~~~i~~~l~~~~~G~~~~g~DigG~~~~~~~eL~~RW~q~~~f~p~~r~h~~~~~~~ 316 (441)
T PF01055_consen 237 GWAGSQRYGGHWSGDNSSSWDGLRSSIPAMLNMGLSGYPFWGSDIGGFSGDPDEELYIRWYQFGAFSPLFRNHGNKPSNP 316 (441)
T ss_dssp EETTGGGTCEEEECSSBSSHHHHHHHHHHHHHHHCTT-SSEEEEET-SBSTSSHHHHHHHHHHHTTSSSEEEEESTTSSB
T ss_pred cCCCCCccceeecccccccHHHHHHHHHHHHHHhhhhcceecCcccccCCCCCHHHHHHHHHhhcCCcceeecCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777788
Q ss_pred CCccccChhHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCccccccccCCCCCCcccccCceeeecCceeEEeeeccCCe
Q 003671 656 REPWLFGERNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTFTNDEAFMVGNALLVQGVYEERAK 735 (804)
Q Consensus 656 ~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~~fP~D~~~~~~~~Qfm~G~~lLVaPV~~~g~~ 735 (804)
+|||.|++++.+++|+++++||+|||||||++++|+.+|.||||||+++||+|+.++++++|||+|++||||||+++|++
T Consensus 317 ~~Pw~~~~~~~~~~r~~~~lRy~L~PY~ys~~~~a~~~G~Pi~Rpl~~~~p~d~~~~~~~~q~m~G~~lLVaPV~~~g~~ 396 (441)
T PF01055_consen 317 REPWSFGDEAEDIFRRAIRLRYRLLPYIYSLAYEAHATGEPIMRPLFWEFPNDPNAYDIDDQFMFGDDLLVAPVLEPGAT 396 (441)
T ss_dssp -SGGGSSCTHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT--SEEEHHHHSTTSGGGGGTTSSEEETTTEEEE---STTSS
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHccCCCCcccccccCCCccHhHhhcCCccccCCCEEEEeeeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCCceEECCCCcEEeCCEEEEEEcCCCCccEEEcCCcEe
Q 003671 736 HISVYLPGKESWYDIRTGARVKGGVTHKLEVSEESVPAFQRPGTII 781 (804)
Q Consensus 736 ~~~vYlP~~g~Wyd~~t~~~~~gg~~~~v~~pl~~iPvfvR~GsIi 781 (804)
+|+|||| +|.|||++||++++||+++++++||+++|||||+|+||
T Consensus 397 ~~~vylP-~G~W~d~~tg~~~~gg~~~~~~~~l~~~P~fvr~Gsii 441 (441)
T PF01055_consen 397 SRTVYLP-EGTWYDFWTGEKYEGGQTITVEAPLDEIPVFVRAGSII 441 (441)
T ss_dssp EEEEEES-SSEEEETTTCCEEESSEEEEEE--TTSCEEEEETTEEE
T ss_pred ccEEECC-CCeEEECCCCCEEECCEEEEEeCCCCccCeEEECCEeC
Confidence 9999999 89999999999999999999999999999999999998
No 8
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=100.00 E-value=2.5e-94 Score=791.71 Aligned_cols=334 Identities=40% Similarity=0.805 Sum_probs=319.8
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCCh--HHHHHHHHHcCC
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHP--EEMQRKLATKGR 433 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p--~~m~~~L~~~g~ 433 (804)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++|++++++|+||+++|||| ++|+++||++|+
T Consensus 1 G~p~lpP~walG~~~s~~~y~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~~mi~~L~~~G~ 80 (339)
T cd06602 1 GRPAMPPYWALGFHLCRWGYKNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRDFTLDPVRFPGLKMPEFVDELHANGQ 80 (339)
T ss_pred CCCCCCchHHhhhHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECcccccCccceecccccCCCccHHHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred eEEEEecCccccC---CChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcce
Q 003671 434 HMVTIVDPHIKRD---DSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLY 510 (804)
Q Consensus 434 k~v~iidP~i~~~---~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~ 510 (804)
|+++|++|+|+.+ .+|.+|+||+++|+|||+.+|+++.+.||||.+++||||||+|++||.++++. +....++++
T Consensus 81 k~~~~i~P~v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~--~~~~~Gvdg 158 (339)
T cd06602 81 HYVPILDPAISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKD--FHDQVPFDG 158 (339)
T ss_pred EEEEEEeCccccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHH--HHhcCCCcE
Confidence 9999999999986 47899999999999999999999999999999999999999999999998763 233357899
Q ss_pred EeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCC
Q 003671 511 IWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGD 590 (804)
Q Consensus 511 ~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGD 590 (804)
+|+|||||+.| +++||+|++++++++++++++. .++|||++|||+|+|+|||+++|+||
T Consensus 159 ~w~D~~Ep~~~-------------------~~~hN~y~~~~~~~~~~~~~~~--~~~r~~~~sRs~~~G~qry~~~w~GD 217 (339)
T cd06602 159 LWIDMNEPSNF-------------------YDVHNLYGLSEAIATYKALQSI--PGKRPFVISRSTFPGSGRYAGHWLGD 217 (339)
T ss_pred EEecCCCCchH-------------------hhhcchhhHHHHHHHHHHHHhc--CCCCCEEEEecCcccccccceeECCC
Confidence 99999999754 6799999999999999999887 44899999999999999999999999
Q ss_pred CcCchHHHHHHHHHHHHHhccCCCccccccCCCCCCCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHH
Q 003671 591 NTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIR 670 (804)
Q Consensus 591 n~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r 670 (804)
+.++|++|+.+|+++|++|++|+||+|+|||||.|++++|||+||+|+|+|+|+||+|+..+...||||.|++++++++|
T Consensus 218 ~~s~W~~L~~~i~~~l~~~~sG~~~~~~DigGf~g~~~~EL~~RW~Q~~~f~P~~r~H~~~~~~~~ePw~~~~~~~~~~r 297 (339)
T cd06602 218 NASTWEDLRYSIIGMLEFNLFGIPMVGADICGFNGDTTEELCARWMQLGAFYPFSRNHNDIGAIPQEPYVWGPSVADAAR 297 (339)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCCHHHHHHHHHHHhhCceeeccCCCCCCCcCCccCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHcCCccccccccCCCCCCccc
Q 003671 671 EAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDESTF 712 (804)
Q Consensus 671 ~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~~fP~D~~~~ 712 (804)
+++++||+|+|||||++++|+.+|.||||||+++||+|+++|
T Consensus 298 ~~~~lRy~L~PYlys~~~~a~~~G~Pi~RPl~~~~p~D~~~~ 339 (339)
T cd06602 298 KALNIRYSLLPYLYTLFYEAHTSGTTVVRPLFFEFPSDPNTY 339 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhccCCCCcccC
Confidence 999999999999999999999999999999999999999875
No 9
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=100.00 E-value=5.7e-94 Score=790.66 Aligned_cols=339 Identities=71% Similarity=1.368 Sum_probs=327.6
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeE
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHM 435 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~ 435 (804)
|+|+|||+||||||||||+|.++++|+++++++++++||||+||+|++|++++++|+||+++||||++|+++||++|+|+
T Consensus 1 G~~~lpP~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~k~ 80 (339)
T cd06603 1 GRPPLPPLFSLGYHQCRWNYKDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRYFTWDKKKFPDPEKMQEKLASKGRKL 80 (339)
T ss_pred CCCCCCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCceEeCcccCCCHHHHHHHHHHCCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecC
Q 003671 436 VTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 436 v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
++|++|+|+.+++|++|++++++|+|||+.+|++|.+.+|||.+++||||||+|++||.++++...+.+..+++++|+||
T Consensus 81 ~~~~~P~v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D~ 160 (339)
T cd06603 81 VTIVDPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDM 160 (339)
T ss_pred EEEecCceecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEecc
Confidence 99999999988778999999999999999999999999999999999999999999999998755444556789999999
Q ss_pred CCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCcCch
Q 003671 516 NEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEW 595 (804)
Q Consensus 516 nEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W 595 (804)
|||++|++++.++|.|+.|.+|.+|+++||+|++++++|++++++++.++++|||++|||+|+|+|||+++|+||+.++|
T Consensus 161 ~Ep~~f~~~~~~~p~d~~~~~~~~~~~~hN~y~~~~~~a~~e~~~~~~~~~~r~~~~sRs~~~G~qry~~~W~GD~~s~W 240 (339)
T cd06603 161 NEPSVFNGPELTMPKDAIHYGGIEHREVHNIYGLYMHMATFDGLLKRSEGNKRPFVLTRSFFAGSQRYAAIWTGDNTATW 240 (339)
T ss_pred CCccccCCCCCcCCCcceecCCCcHHHHhhHhHHHHHHHHHHHHHHhhccCCceEEEEecccccccceeeeeCCCccCCH
Confidence 99999999999999999999999999999999999999999999998754689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCccccccCCCCCCCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHH
Q 003671 596 EQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHV 675 (804)
Q Consensus 596 ~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~l 675 (804)
++|+.+|+++|++|++|+||+|+|||||.|++++|||+||+|+|||+|+||+|+..++..||||.|++++++++|+++++
T Consensus 241 ~~L~~~i~~~L~~~l~G~~~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~l 320 (339)
T cd06603 241 EHLKISIPMLLSLNICGIPFCGADVGGFFGNPDEELLVRWYQAGAFYPFFRAHAHIDTKRREPWLFGEEYTSIIREAIRL 320 (339)
T ss_pred HHHHHHHHHHHHHhhcCccccCCccCCcCCCCCHHHHHHHHHHhhcCceeecCCCCCCCCCCCeecChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHcC
Q 003671 676 RYMFLPYFYTLFREANTTG 694 (804)
Q Consensus 676 Ry~LlPY~Yt~~~~a~~~G 694 (804)
||+|||||||++++||.+|
T Consensus 321 Ry~LlPYlys~~~~a~~tG 339 (339)
T cd06603 321 RYALLPYWYTLFYEASVTG 339 (339)
T ss_pred HHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999998
No 10
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=100.00 E-value=1.6e-91 Score=763.78 Aligned_cols=317 Identities=42% Similarity=0.870 Sum_probs=304.6
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeE
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHM 435 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~ 435 (804)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++|++++++|+||+++||||++|+++||++|+|+
T Consensus 1 G~~~lpP~walG~~~sr~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~i~~l~~~g~k~ 80 (317)
T cd06600 1 GKPALPPMWALGYHISRYSYYPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRLFTWDPYRFPEPKKLIDELHKRNVKL 80 (317)
T ss_pred CCCCCCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCceeechhcCCCHHHHHHHHHHCCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecC
Q 003671 436 VTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 436 v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
++|++|+|+.++.|+.|.++.++|+|||+.+|+++.+.+|||.+++||||||+|++||.++++. +....+++++|+||
T Consensus 81 ~~~~~P~i~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~--~~~~~gvdg~w~D~ 158 (317)
T cd06600 81 VTIVDPGIRVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSE--WLNSQGVDGIWLDM 158 (317)
T ss_pred EEEeeccccCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHH--HhhcCCCceEEeeC
Confidence 9999999998887899999999999999999999999999999999999999999999998864 23346799999999
Q ss_pred CCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCcCch
Q 003671 516 NEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEW 595 (804)
Q Consensus 516 nEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W 595 (804)
|||+.| +++||+||+++++|+++++++.. +++|||++|||+|+|+|||+++|+||+.|+|
T Consensus 159 ~Ep~~~-------------------~~~hn~y~~~~~~a~~~~~~~~~-~~~r~~~~sRs~~~G~qry~~~W~GD~~s~W 218 (317)
T cd06600 159 NEPSDF-------------------EKVHNLYGLYEAMATAEGFRTSH-PRNRIFILTRSGFAGSQKYAAIWTGDNTASW 218 (317)
T ss_pred CCCccH-------------------HHhcchhhHHHHHHHHHHHHHhc-CCCCceEEEeccccccCCccceECCcccccH
Confidence 999764 68999999999999999999876 4589999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCccccccCCCCCCCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHH
Q 003671 596 EQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHV 675 (804)
Q Consensus 596 ~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~l 675 (804)
++|+.+|+++|++|++|+||+|+|||||.|++++|||+||+|+|||+|+||+|+..+...||||.|++++.+++|+++++
T Consensus 219 ~~L~~~i~~~l~~gl~G~p~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~l 298 (317)
T cd06600 219 DDLKLSIPLVLGLSISGIPFVGCDIGGFQGDNSMELLVRWYQLGAFFPFYRSHKATDGKDTEPVFFPDYYKEKVREIVEL 298 (317)
T ss_pred HHHHHHHHHHHHHHhcCCCccCcccCCCCCCCCHHHHHHHHHHhhcCceeeccCCCCCCCCCCeecCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHHHcC
Q 003671 676 RYMFLPYFYTLFREANTTG 694 (804)
Q Consensus 676 Ry~LlPY~Yt~~~~a~~~G 694 (804)
||+|||||||++++||++|
T Consensus 299 Ry~LlPYlytl~~~a~~~G 317 (317)
T cd06600 299 RYKLLPYLYTLFLRAHEKG 317 (317)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998
No 11
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=100.00 E-value=2.9e-91 Score=769.51 Aligned_cols=335 Identities=50% Similarity=0.978 Sum_probs=320.3
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeE
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHM 435 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~ 435 (804)
|||+|||+||||||||||+|.++++|+++++++++++||||+||+|++|++++++|+||+++||||++|+++||++|+|+
T Consensus 1 G~p~l~P~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~fPdp~~m~~~l~~~g~~~ 80 (339)
T cd06604 1 GRPPLPPKWALGYQQSRWSYYPEEEVREIADEFRERDIPCDAIYLDIDYMDGYRVFTWDKERFPDPKELIKELHEQGFKV 80 (339)
T ss_pred CCCCCCchHHHhHHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECchhhCCCCceeeccccCCCHHHHHHHHHHCCCEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecC
Q 003671 436 VTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 436 v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
++|++|+|+.+++|++|+|++++|+|||+++|+++.+.||||.+++||||||+|++||.++++.. . ..+++++|+||
T Consensus 81 ~~~~~P~v~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~--~-~~Gvdg~w~D~ 157 (339)
T cd06604 81 VTIIDPGVKVDPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAFPDFTNPKVREWWGSLYKKF--V-DLGVDGIWNDM 157 (339)
T ss_pred EEEEeCceeCCCCChHHHHHHHCCeEEECCCCCEEEEEecCCCccccCCCChHHHHHHHHHHHHH--h-hCCCceEeecC
Confidence 99999999988788999999999999999999999999999999999999999999999987642 2 46799999999
Q ss_pred CCCCCCCCCCc-cCCCCCccCCc---ccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCC
Q 003671 516 NEPSVFNGPEV-TMPRDALHLDR---VEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDN 591 (804)
Q Consensus 516 nEps~f~g~e~-t~~~d~~h~~g---~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn 591 (804)
|||++|..++. ++|.|+.|.++ .+|+++||+|++++++|+++++++..+ ++|||++|||+|+|+|||+++|+||+
T Consensus 158 ~Ep~~~~~~~~~~~p~~~~~~~~~~~~~~~~~hn~y~~~~~~a~~~~~~~~~~-~~r~~~~sRs~~~G~qry~~~W~GD~ 236 (339)
T cd06604 158 NEPAVFNTPGKTTMPRDAVHRLDGGGGTHEEVHNVYGLLMARATYEGLKKARP-NERPFILTRAGYAGIQRYAAVWTGDN 236 (339)
T ss_pred CCccccCCcccccCCccceeeCCCCCCcHhHhcchhhHHHHHHHHHHHHHhCC-CCCcEEEEecccccccccccccCCcc
Confidence 99999987654 58999999754 489999999999999999999999863 58999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHhccCCCccccccCCCCCCCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHH
Q 003671 592 TAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIRE 671 (804)
Q Consensus 592 ~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~ 671 (804)
.++|++|+.+|+++|++|++|+||+|+|||||.+++++|||+||+|+|||+|+||+|+..+...||||.|++++.+++|+
T Consensus 237 ~ssW~~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~~~EL~~RW~Q~g~f~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~ 316 (339)
T cd06604 237 RSSWEHLRLSIPMLLNLGLSGVPFVGADIGGFGGDPSPELLVRWMQLGAFFPFFRNHSAKGTRDQEPWAFGEEVEEIARE 316 (339)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCcccccccCCCCCCCCHHHHHHHHHHHhccchhhccCCCCCCCCCCeecChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHHcC
Q 003671 672 AIHVRYMFLPYFYTLFREANTTG 694 (804)
Q Consensus 672 ~i~lRy~LlPY~Yt~~~~a~~~G 694 (804)
++++||+|||||||++++|+++|
T Consensus 317 ~~~lRy~LlPY~ysl~~~a~~tG 339 (339)
T cd06604 317 AIKLRYRLLPYLYTLFWEASETG 339 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999998
No 12
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=2.7e-84 Score=706.96 Aligned_cols=292 Identities=33% Similarity=0.696 Sum_probs=266.0
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeE
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHM 435 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~ 435 (804)
|+|+|||+||||||||||+|.++++|++|+++|++++||||+||+|||||+++++||||+++||||++|+++||++|+|+
T Consensus 1 G~p~mpP~WalG~~qsr~~Y~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~~Ft~d~~~FPdp~~mv~~L~~~G~kl 80 (332)
T cd06601 1 GRSKLKPRYALGFHQGCYGYSNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYRTFTTNGGGFPNPKEMFDNLHNKGLKC 80 (332)
T ss_pred CCCCCCchHHhhhhhCCCCCCCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCCceeecCCCCCCHHHHHHHHHHCCCeE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecC
Q 003671 436 VTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 436 v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
|+|++|+|+ .|.+|||.+++||||||+|++||.++++... ..+++++|+||
T Consensus 81 v~~i~P~i~--------------------------~g~~~~~~~~~pDftnp~ar~wW~~~~~~l~---~~Gv~~~W~Dm 131 (332)
T cd06601 81 STNITPVIS--------------------------YGGGLGSPGLYPDLGRPDVREWWGNQYKYLF---DIGLEFVWQDM 131 (332)
T ss_pred EEEecCcee--------------------------cCccCCCCceeeCCCCHHHHHHHHHHHHHHH---hCCCceeecCC
Confidence 999999998 1346888899999999999999998875322 24688999999
Q ss_pred CCCCCCCC--CCccCCCCCccCC--------cccchhhchhhHHHHHHHhHHHHHHhcC-CCCCCeEEeccccCCCCccc
Q 003671 516 NEPSVFNG--PEVTMPRDALHLD--------RVEHRELHNAYGYYFHMATSDGLLKREN-GKDRPFVLARAFFAGSQRYG 584 (804)
Q Consensus 516 nEps~f~g--~e~t~~~d~~h~~--------g~~~~~~HN~Yg~~~~~at~~~l~~~~~-~~~RpfilsRS~f~Gsqry~ 584 (804)
|||++|++ ...++|.|+.+.+ +..|+++||+||+++++|+++++++... .++||||||||+|+|+|||+
T Consensus 132 nEp~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~hN~Y~~~~~~a~~e~~~~~~~~~~~RpfiltRS~~aGsqrY~ 211 (332)
T cd06601 132 TTPAIMPSYGDMKGFPPRLLVTDDSYENNVKRKPAIELWNLYSYNLHKATWHGLNNLNARKNKRNFIIGRGSYAGMQRFA 211 (332)
T ss_pred CCcccccCCCccCCCCCcccccCCccccccCCchHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCcEEEEecCcCccCCcC
Confidence 99999975 3357788776543 3478999999999999999999987541 34899999999999999999
Q ss_pred ccccCCCcCchHHHHHHHHHHHHHhccCCCccccccCCCCCC----------CCHHHHHHHhhcccccccccccCCCC--
Q 003671 585 AVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGN----------PDTELLVRWYQLGAYYPFFRAHAHHD-- 652 (804)
Q Consensus 585 ~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~----------p~~EL~~RW~Q~gaf~P~~R~H~~~~-- 652 (804)
++|+|||.|+|++|+.+|+++|++||+|+||||+|||||.|+ +++|||+||+|+|||+||||+|+...
T Consensus 212 ~~WsGDn~stW~~L~~si~~~L~~~lsGip~~g~DIGGF~g~~~~~~~~~~~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~ 291 (332)
T cd06601 212 GLWTGDNSSSWDFLQINIAQVLNLGMSGLPIAGSDIGGFTSYDGENSIQRTWCNPELLIRWYQAGFLLPWFRNHYDRKIR 291 (332)
T ss_pred ceeCCCcccCHHHHHHHHHHHHHhhhcCCCccCCccCCcCCCCcccccccCCCCHHHHHHHHHHhcCCceeccCCCCccC
Confidence 999999999999999999999999999999999999999987 58999999999999999999999754
Q ss_pred CCCCCc-----------------cccChhHHHHHHHHHHHHH
Q 003671 653 TKRREP-----------------WLFGERNTQLIREAIHVRY 677 (804)
Q Consensus 653 ~~~~eP-----------------w~~~~~~~~~~r~~i~lRy 677 (804)
++.||| |.+ +++++++|++|++||
T Consensus 292 ~~~~ep~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~i~~Ry 332 (332)
T cd06601 292 QKFQEPAKYFQEPYAHLIDYEQLYLY-ENVPEICRKYVELRY 332 (332)
T ss_pred cccCCccccccccccccccccccccc-HHHHHHHHHHHHhcC
Confidence 678888 555 889999999999998
No 13
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=3.9e-81 Score=682.40 Aligned_cols=307 Identities=31% Similarity=0.604 Sum_probs=284.2
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccC------CCcceeECCCCCCChHHHHHHHH
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTD------GKKYFTWDRLSFPHPEEMQRKLA 429 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~------~~~~ft~d~~~FP~p~~m~~~L~ 429 (804)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++|+. ..++||||+++||||++|+++||
T Consensus 1 G~~~l~P~wa~G~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp~~mi~~L~ 80 (317)
T cd06598 1 GRQPLPPRWALGNWASRFGYRNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDPAGMIADLA 80 (317)
T ss_pred CCCCCCchHHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCCceeeeEeccccCCCHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999986 24589999999999999999999
Q ss_pred HcCCeEEEEecCccccCCChhhhHHHHHcCceE-EcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCc
Q 003671 430 TKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYV-KDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPS 508 (804)
Q Consensus 430 ~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~v-k~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~ 508 (804)
++|+|+++|++|+|+.++ +.|+|+.++|+++ ++.+|+++.+.+|||.+++||||||+|++||.++++.. -..++
T Consensus 81 ~~G~k~~~~v~P~v~~~~--~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~---~~~Gv 155 (317)
T cd06598 81 KKGVKTIVITEPFVLKNS--KNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKL---IDQGV 155 (317)
T ss_pred HcCCcEEEEEcCcccCCc--hhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHHh---hhCCc
Confidence 999999999999999765 6899999999954 55667889999999999999999999999999998643 23578
Q ss_pred ceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccc-cc
Q 003671 509 LYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA-VW 587 (804)
Q Consensus 509 ~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~-~W 587 (804)
+++|+|||||+.| |.|..|.+| .+.++||+|++++++++++++++.. .++|||+++||+|+|+|||++ +|
T Consensus 156 dg~w~D~~Ep~~~-------~~~~~~~~g-~~~~~hN~y~~~~~~~~~e~~~~~~-~~~r~~~~~Rs~~~Gsqry~~~~W 226 (317)
T cd06598 156 TGWWGDLGEPEVH-------PPDMCHHKG-KAAEVHNIYGHLWAKSIYEGYQQNY-PNERPFILMRAGFAGSQRYGVIPW 226 (317)
T ss_pred cEEEecCCCcccc-------CCccccCCC-cHhHHhhHHHHHHHHHHHHHHHHhc-CCCCeEEEEecCcCccccCcCCcc
Confidence 9999999999875 456667665 6899999999999999999999875 458999999999999999985 89
Q ss_pred cCCCcCchHHHHHHHHHHHHHhccCCCccccccCCCCCC--CCHHHHHHHhhcccccccccccCCCCCCCCCccccChhH
Q 003671 588 TGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGN--PDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERN 665 (804)
Q Consensus 588 tGDn~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~--p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~ 665 (804)
+|||.++|++|+.+|+++|++|++|+||+|+|||||.|+ +++|||+||+|+|||+|+||+|++.+ .++|||.|++++
T Consensus 227 sGD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~~~~~EL~~RW~q~g~f~P~~R~H~~~~-~~~ePw~~~~~~ 305 (317)
T cd06598 227 SGDVGRTWDGLKSQPNAALQMSMSGIDYYHSDIGGFAGGDELDPELYTRWFQYGAFDPPFRPHAQNA-IPPEPVFYSIGT 305 (317)
T ss_pred CCCCcCCHHHHHHHHHHHHhhhccCCcccCCCcCCcCCCCCCCHHHHHHHHHhccCCcccccCCCCC-CCCCCCcCChHH
Confidence 999999999999999999999999999999999999998 99999999999999999999999875 468999999999
Q ss_pred HHHHHHHHHHHH
Q 003671 666 TQLIREAIHVRY 677 (804)
Q Consensus 666 ~~~~r~~i~lRy 677 (804)
++++|++|++||
T Consensus 306 ~~~~r~~~~lRY 317 (317)
T cd06598 306 KNINRENIRLRY 317 (317)
T ss_pred HHHHHHHHHhhC
Confidence 999999999998
No 14
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=7e-81 Score=679.16 Aligned_cols=306 Identities=31% Similarity=0.552 Sum_probs=290.6
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCc--ceeECCCCCCChHHHHHHHHHcCC
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKK--YFTWDRLSFPHPEEMQRKLATKGR 433 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~--~ft~d~~~FP~p~~m~~~L~~~g~ 433 (804)
|+|+|||+||||||||||+|.++++|+++++++++++||||+||+|++|+++.+ +|+||+++||||++|+++||++|+
T Consensus 1 G~~~l~P~wa~G~~~~~~~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~~f~~d~~~FPd~~~~i~~l~~~G~ 80 (308)
T cd06593 1 GRPALPPAWSFGLWLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQWCDFEFDPDRFPDPEGMLSRLKEKGF 80 (308)
T ss_pred CCCCCCchHHHHHHHHcccCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCCcceeeEECcccCCCHHHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999998877 999999999999999999999999
Q ss_pred eEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEee
Q 003671 434 HMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWN 513 (804)
Q Consensus 434 k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~ 513 (804)
|+++|++|+|..++ ++|++++++|+|||+.+|+++.+.+|||.+++||||||+|++||.++++.. .. .+++++|+
T Consensus 81 ~~~~~~~P~i~~~~--~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~--~~-~Gid~~~~ 155 (308)
T cd06593 81 KVCLWINPYIAQKS--PLFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKPL--LD-MGVDCFKT 155 (308)
T ss_pred eEEEEecCCCCCCc--hhHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHHH--HH-hCCcEEec
Confidence 99999999998765 589999999999999999999999999999999999999999999998732 22 46899999
Q ss_pred cCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCcC
Q 003671 514 DMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTA 593 (804)
Q Consensus 514 DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s 593 (804)
||||+ +|.|+.+++|..|+++||+|++++++++++++++.. +++|||++|||+|+|+|||+++|+|||.+
T Consensus 156 D~~e~---------~p~~~~~~~g~~~~~~hn~y~~~~~~~~~~~~~~~~-~~~r~~~~~Rs~~~Gsqry~~~w~GD~~s 225 (308)
T cd06593 156 DFGER---------IPTDVVYYDGSDGEKMHNYYALLYNKAVYEATKEVK-GEGEAVVWARSAWAGSQKYPVHWGGDCES 225 (308)
T ss_pred CCCCC---------CCccccccCCCCcceeeeHHHHHHHHHHHHHHHHhc-CCCCeEEEEcCCccccccCCCEECCCccc
Confidence 99996 577888888999999999999999999999999886 55799999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHhccCCCccccccCCCCCCCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHH
Q 003671 594 EWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAI 673 (804)
Q Consensus 594 ~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i 673 (804)
+|++|+.+|+++|++|++|+||+|+|||||.|++++|||+||+|+|||+|+||+|+.. .||||.|++++++++|+++
T Consensus 226 ~w~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~EL~~RW~q~gaf~P~~r~h~~~---~~~Pw~~~~~~~~~~r~~~ 302 (308)
T cd06593 226 TFEGMAESLRGGLSLGLSGFGFWSHDIGGFEGTPPPDLYKRWAQFGLLSSHSRLHGSG---YREPWEYGEEAVDVVRKFA 302 (308)
T ss_pred CHHHHHHHHHHHHhccccCCceecCccCCcCCCCCHHHHHHHHHhCcCCcccccCCCC---CCCCcccChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999864 8999999999999999999
Q ss_pred HHHHhh
Q 003671 674 HVRYMF 679 (804)
Q Consensus 674 ~lRy~L 679 (804)
++||+|
T Consensus 303 ~lRy~L 308 (308)
T cd06593 303 KLKYRL 308 (308)
T ss_pred HHHhcC
Confidence 999997
No 15
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=2.4e-79 Score=668.89 Aligned_cols=305 Identities=28% Similarity=0.472 Sum_probs=276.0
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCc--ceeECCCCCCChHHHHHHHHHcCC
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKK--YFTWDRLSFPHPEEMQRKLATKGR 433 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~--~ft~d~~~FP~p~~m~~~L~~~g~ 433 (804)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++|+.+.+ +|+||+++||||++|+++||++|+
T Consensus 1 G~~~m~P~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~ 80 (319)
T cd06591 1 GKAPMMPKWAYGFWQSKERYKTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQGWGEWKFDPERFPDPKAMVRELHEMNA 80 (319)
T ss_pred CCCCCCchHHHHHHHhcccCCCHHHHHHHHHHHHHhCCCccEEEEechhhcCCCceeEEEChhhCCCHHHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999999888 999999999999999999999999
Q ss_pred eEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEee
Q 003671 434 HMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWN 513 (804)
Q Consensus 434 k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~ 513 (804)
|+++|++|+|+.+ +..|++++++|+|||+.+|+.+. .||||.+++||||||+|++||.++++. ..-..+++++|+
T Consensus 81 kv~~~i~P~v~~~--~~~y~e~~~~g~~v~~~~g~~~~-~~w~g~~~~~Dftnp~a~~w~~~~~~~--~~~~~Gvdg~w~ 155 (319)
T cd06591 81 ELMISIWPTFGPE--TENYKEMDEKGYLIKTDRGPRVT-MQFGGNTRFYDATNPEAREYYWKQLKK--NYYDKGVDAWWL 155 (319)
T ss_pred EEEEEecCCcCCC--ChhHHHHHHCCEEEEcCCCCeee-eeCCCCccccCCCCHHHHHHHHHHHHH--HhhcCCCcEEEe
Confidence 9999999999865 47899999999999999998876 899999999999999999999887652 222367899999
Q ss_pred cCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccc-cccCCCc
Q 003671 514 DMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA-VWTGDNT 592 (804)
Q Consensus 514 DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~-~WtGDn~ 592 (804)
|||||+.|...+. ..+..+. ..+++++||+|+++++++++++++++. +++|||++|||+|+|+|||++ +|+|||.
T Consensus 156 D~~Ep~~~~~~~~--~~~~~~~-~~~~~~~hN~y~~~~~~~~~e~~~~~~-~~~r~f~~sRs~~~Gsqry~~~~W~GD~~ 231 (319)
T cd06591 156 DAAEPEYSVYDFG--LDNYRYH-LGPGLEVGNAYPLMHAKGIYEGQRAAG-DEKRVVILTRSAWAGSQRYGALVWSGDID 231 (319)
T ss_pred cCCCCCccCCccc--ccCcccC-CCCchhhhhhhHHHHHHHHHHHHHHhC-CCCCceEEEeccccccccccCceeCCCcc
Confidence 9999998864321 1222222 337899999999999999999998875 358999999999999999985 8999999
Q ss_pred CchHHHHHHHHHHHHHhccCCCccccccCCCCCCCC---------HHHHHHHhhcccccccccccCCCCCC-CCCccccC
Q 003671 593 AEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPD---------TELLVRWYQLGAYYPFFRAHAHHDTK-RREPWLFG 662 (804)
Q Consensus 593 s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~---------~EL~~RW~Q~gaf~P~~R~H~~~~~~-~~ePw~~~ 662 (804)
|+|++|+.+|+++|++|++|+||+|+|||||.|+++ +|||+||+|+|||+|+||+|+..... .+|||.|+
T Consensus 232 s~w~~L~~~i~~~l~~glsG~~~~g~DiGGF~~~~~~~~~~~~~~~EL~~RW~q~gaf~P~~R~H~~~~~~~~~ePw~~g 311 (319)
T cd06591 232 SSWETLRRQIAAGLNMGLSGIPWWTTDIGGFFVGNPPAGLDDPEYRELYVRWFQFGAFCPVMRSHGTREPREINEFWSYG 311 (319)
T ss_pred ccHHHHHHHHHHHHHHhhcCCccccCCcCCcCCCCccccccCCccHHHHHHHHHHhcCccccccCCCCCCCCCCcCcCCC
Confidence 999999999999999999999999999999998876 89999999999999999999987653 57999999
Q ss_pred hhHHHHH
Q 003671 663 ERNTQLI 669 (804)
Q Consensus 663 ~~~~~~~ 669 (804)
+++++++
T Consensus 312 ~e~~~~~ 318 (319)
T cd06591 312 EEVYDIL 318 (319)
T ss_pred hHHHHhh
Confidence 9988875
No 16
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.1e-77 Score=655.19 Aligned_cols=302 Identities=32% Similarity=0.585 Sum_probs=270.1
Q ss_pred CCCCCCccccccccccccCCCC-----HHHHHHHHHhhhcCCCCceEEEeeccccCC----CcceeECCCCCCChHHHHH
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRD-----EEDVEQVDSKFDEHDIPYDVLWLDIEHTDG----KKYFTWDRLSFPHPEEMQR 426 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~-----~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~----~~~ft~d~~~FP~p~~m~~ 426 (804)
|+|+|||+||||||||||+|.+ |++|+++++++++++||||+||||++|+++ +.+|+||+++||||++|++
T Consensus 1 G~~~mpP~walG~~~sr~~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~~~~f~~d~~~FPdp~~mi~ 80 (317)
T cd06599 1 GKPAMVPRWSLGYSGSTMYYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGKRYVFNWNKDRFPDPAAFVA 80 (317)
T ss_pred CCCCCCchHHHHHHhcCCCCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCCceeeeecCcccCCCHHHHHH
Confidence 8999999999999999999988 999999999999999999999999999965 4579999999999999999
Q ss_pred HHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCC-CeeeeecCCCcccccCCCHhHHHHHHhhcccccccCC
Q 003671 427 KLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKR-DYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGS 505 (804)
Q Consensus 427 ~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~-~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~ 505 (804)
+||++|+|+++|++|+|..++ +.|+|+.++|||||+.+|+ ++.+.+|||.+++||||||+|++||.++++.... .
T Consensus 81 ~L~~~g~k~~~~i~P~i~~~~--~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~--~ 156 (317)
T cd06599 81 KFHERGIRLAPNIKPGLLQDH--PRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALL--D 156 (317)
T ss_pred HHHHCCCEEEEEeCCcccCCC--HHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChHHHHHHHHHHHHHHh--c
Confidence 999999999999999998764 7899999999999999887 4889999999999999999999999998742211 2
Q ss_pred CCcceEeecCCCCCCCCCCCccCCCCCccC-C--cccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCc
Q 003671 506 TPSLYIWNDMNEPSVFNGPEVTMPRDALHL-D--RVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQR 582 (804)
Q Consensus 506 ~~~~~~W~DmnEps~f~g~e~t~~~d~~h~-~--g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqr 582 (804)
.+++++|+|||||+.+ +.++.+. + +..+.++||+|++++++|+++++++.. +++|||+||||+|+|+||
T Consensus 157 ~Gvdg~w~D~~E~~~~-------~~~~~~~~~g~~~~~~~~~n~y~~l~~~a~~~~~~~~~-~~~r~f~ltRs~~~G~qr 228 (317)
T cd06599 157 LGIDSTWNDNNEYEIW-------DDDAVCDGFGKPGTIGELRPVQPNLMARASHEAQAEHY-PNRRPYIVSRSGFAGIQR 228 (317)
T ss_pred CCCcEEEecCCCCccC-------CCcceecCCCCccchhhcccchHHHHHHHHHHHHHHhC-CCCCcEEEEcCCcccccC
Confidence 4689999999999853 3344333 2 235567999999999999999998775 458999999999999999
Q ss_pred ccccccCCCcCchHHHHHHHHHHHHHhccCCCccccccCCCCCC-CCHHHHHHHhhcccccccccccCCCC-CCCCCccc
Q 003671 583 YGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGN-PDTELLVRWYQLGAYYPFFRAHAHHD-TKRREPWL 660 (804)
Q Consensus 583 y~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~-p~~EL~~RW~Q~gaf~P~~R~H~~~~-~~~~ePw~ 660 (804)
|+++|+||+.++|++|+.+|+++|++|++|+||+|+|||||.++ +++|||+||+|+|+|+|+||+|+..+ ...||||.
T Consensus 229 y~~~WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g~DIGGF~~~~~~~ELy~RW~Q~g~F~P~~R~H~~~~~~~~~ePw~ 308 (317)
T cd06599 229 YAQTWSGDNRTSWKTLRYNIAMGLGMGLSGVANIGHDIGGFAGPAPEPELFVRWVQNGIFQPRFCIHSWNTDNTVTEPWM 308 (317)
T ss_pred CcCeeCCCcccCHHHHHHHHHHHHhhhccCCcccccccCccCCCCCCHHHHHHHHHHccCCHhhhcccCCCCCCCcCCee
Confidence 99999999999999999999999999999999999999999986 89999999999999999999998764 36799999
Q ss_pred cChhHHHHHH
Q 003671 661 FGERNTQLIR 670 (804)
Q Consensus 661 ~~~~~~~~~r 670 (804)
|++ .++++|
T Consensus 309 f~~-~~~~~~ 317 (317)
T cd06599 309 YPE-VTDYIR 317 (317)
T ss_pred ccc-chhhcC
Confidence 965 455543
No 17
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.9e-77 Score=657.81 Aligned_cols=298 Identities=27% Similarity=0.418 Sum_probs=266.8
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEee-------------cccc--CCCcceeEC------
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLD-------------IEHT--DGKKYFTWD------ 414 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlD-------------i~~~--~~~~~ft~d------ 414 (804)
|||+|||+||||||||||+|.++++|++|+++|++++||||+|||| |+|| ++++.|+|+
T Consensus 1 G~p~lpP~walG~~~sr~~Y~~~~ev~~v~~~~~~~~iP~d~i~lD~W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~~ 80 (340)
T cd06597 1 GKPELLPKWAFGLWMSANEWDTQAEVMRQMDAHEEHGIPVTVVVIEQWSDEATFYVFNDAQYTPKDGGAPLSYDDFSFPV 80 (340)
T ss_pred CCCCCCchHHhhhhhhccCCCCHHHHHHHHHHHHHcCCCeeEEEEecccCcceeeeeccchhcccccCCcceecccccCc
Confidence 8999999999999999999999999999999999999999999886 7776 455555554
Q ss_pred CCCCCChHHHHHHHHHcCCeEEEEecCccccCC-----ChhhhHHHHHcCceEEcCCCCCeee-eecCCCcccccCCCHh
Q 003671 415 RLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDD-----SYWLHNEATEKGYYVKDATKRDYDG-WCWPGSSSYLDMLNPE 488 (804)
Q Consensus 415 ~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~-----~y~~~~~~~~~~~~vk~~~g~~~~g-~~WpG~~~~~Dftnp~ 488 (804)
+++||||++|+++||++|+|+++|++|+|+.+. .+..|.++.++|||||+.+|+++.+ .+|||.+++||||||+
T Consensus 81 ~~~FPdp~~mi~~Lh~~G~kv~l~v~P~i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G~~~~~~~~W~g~~~~~Dftnp~ 160 (340)
T cd06597 81 EGRWPNPKGMIDELHEQGVKVLLWQIPIIKLRPHPHGQADNDEDYAVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTNPE 160 (340)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEecCccccccccccccchhHHHHHHCCEEEEcCCCCccccccccCCCceeecCCCHH
Confidence 368999999999999999999999999998542 1235789999999999999998764 5899999999999999
Q ss_pred HHHHHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCC
Q 003671 489 IRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDR 568 (804)
Q Consensus 489 a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~R 568 (804)
|++||.++++.. ....+++++|+|||||. .+.|+.|++|.+++++||+||+++++++++++++. + +|
T Consensus 161 a~~Ww~~~~~~~--~~~~Gidg~w~D~~E~~--------~~~~~~~~~g~~~~~~hN~y~~~~~~~~~e~~~~~--~-~r 227 (340)
T cd06597 161 AAQWWMEKRRYL--VDELGIDGFKTDGGEHV--------WGRDLHFRDGRRGDEMRNTYPNHYVRAYNDFLRRA--K-KD 227 (340)
T ss_pred HHHHHHHHHHHH--HHhcCCcEEEecCCCcc--------CCCCceecCCCcHHHhhcccHHHHHHHHHHHHHhc--c-CC
Confidence 999999987632 22356899999999974 24567788888999999999999999999988765 3 89
Q ss_pred CeEEeccccCCCCcccccccCCCcCchHHHHHHHHHHHHHhccCCCccccccCCCCCC-CCHHHHHHHhhcccccccccc
Q 003671 569 PFVLARAFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGN-PDTELLVRWYQLGAYYPFFRA 647 (804)
Q Consensus 569 pfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~-p~~EL~~RW~Q~gaf~P~~R~ 647 (804)
|||||||+|+|+|||+++|+|||.|+|++||.+|+++|++|++|+||+|+|||||.|+ |++|||+||+|+|||+|+||+
T Consensus 228 ~filtRs~~~Gsqry~~~WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g~DIgGF~g~~~~~EL~~RW~Q~g~F~P~~R~ 307 (340)
T cd06597 228 GVTFSRAGYTGAQAHGIFWAGDENSTFGAFRWSVFAGLSASASGIPYWGWDLAGFTGDVPTAELYVRSTAMAAFVPIMQY 307 (340)
T ss_pred cEEEEecccCccCCCcceecCCCCCCHHHHHHHHHHHHHHhhcCCCcCCCccCCcCCCCCCHHHHHHHHHHhhcchhhhh
Confidence 9999999999999999999999999999999999999999999999999999999998 899999999999999999999
Q ss_pred cCCCCC-----CCCCccccChhHH
Q 003671 648 HAHHDT-----KRREPWLFGERNT 666 (804)
Q Consensus 648 H~~~~~-----~~~ePw~~~~~~~ 666 (804)
|+..+. .+||||.|++++.
T Consensus 308 H~~~~~~~~~~~~~epw~~~~~~~ 331 (340)
T cd06597 308 HSEFNGHSSPNEDRTPWNIAERTG 331 (340)
T ss_pred ccCCCCCCcCcCCccCCcccCcCC
Confidence 998765 5899999987653
No 18
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=100.00 E-value=5.2e-77 Score=648.87 Aligned_cols=298 Identities=23% Similarity=0.397 Sum_probs=273.0
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCC------C---cceeECCCCCCChHHHHH
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDG------K---KYFTWDRLSFPHPEEMQR 426 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~------~---~~ft~d~~~FP~p~~m~~ 426 (804)
|+++|||+||||+||||+.+ ++++|+++++++++++||||+|||| +||+. + .+||||+++||||++|++
T Consensus 1 G~~p~~P~wa~G~~~~~~~~-s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~g~~~~~~f~~d~~~FPdp~~mi~ 78 (317)
T cd06594 1 GRQPELPDWAYGGAILGLQG-GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSFGDRLWWNWEWDPERYPGLDELIE 78 (317)
T ss_pred CCCCCCchhhhCcEEeeeeC-CHHHHHHHHHHHHHcCCCeeEEEEc-cccCcccccccceeeeeeEEChhhCCCHHHHHH
Confidence 89999999999999999865 9999999999999999999999999 67652 2 258999999999999999
Q ss_pred HHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCC
Q 003671 427 KLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGST 506 (804)
Q Consensus 427 ~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~ 506 (804)
+||++|+|+|+|++|+|+.+... .|+++.++|+|||+++|+++.+.+|||.+++||||||+|++||.++++.. .-..
T Consensus 79 ~Lh~~G~~~~~~i~P~v~~~~~~-~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~--~~~~ 155 (317)
T cd06594 79 ELKARGIRVLTYINPYLADDGPL-YYEEAKDAGYLVKDADGSPYLVDFGEFDCGVLDLTNPAARDWFKQVIKEM--LLDL 155 (317)
T ss_pred HHHHCCCEEEEEecCceecCCch-hHHHHHHCCeEEECCCCCeeeeccCCCCceeeecCCHHHHHHHHHHHHHH--hhhc
Confidence 99999999999999999987532 37999999999999999999999999999999999999999999998632 1235
Q ss_pred CcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccc-
Q 003671 507 PSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA- 585 (804)
Q Consensus 507 ~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~- 585 (804)
+++++|+||||+ +|.|+.+++|.+|+++||+|++++++++++++++.. +++||||||||+|+|+|||++
T Consensus 156 Gvdg~w~D~~E~---------~p~d~~~~~g~~~~~~hN~y~~~~~~~~~~~~~~~~-~~~r~fvltRs~~~Gsqry~~~ 225 (317)
T cd06594 156 GLSGWMADFGEY---------LPFDAVLHSGEDAATMHNRYPELWAKLNREAVEEAG-KTGDILFFMRSGFTGSQKYSTL 225 (317)
T ss_pred CCcEEEecCCCC---------CCCcceecCCCCHHHHhhHHHHHHHHHHHHHHHHhc-cCCCeEEEEccccccccccccc
Confidence 799999999995 467788888989999999999999999999998875 458999999999999999985
Q ss_pred cccCCCcCchH---HHHHHHHHHHHHhccCCCccccccCCCCC----CCCHHHHHHHhhcccccccccccCCCCCCCCCc
Q 003671 586 VWTGDNTAEWE---QLRVSVPMILTLGLTGMSFSGADVGGFFG----NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREP 658 (804)
Q Consensus 586 ~WtGDn~s~W~---~L~~si~~~L~~~l~G~p~~g~DigGF~g----~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~eP 658 (804)
+|+|||.++|+ +|+.+|+++|++|++|+||+|+|||||.+ +|++|||+||+|+|||+|+||+|+...++.++|
T Consensus 226 ~WsGD~~s~W~~~~~L~~~i~~~L~~~lsG~~~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~~~ 305 (317)
T cd06594 226 FWAGDQMVSWDAHDGLKSVVPGALSSGLSGYALHHSDIGGYTSLNGYVRTEELLLRWAEMAAFTPVMRTHEGNRPDDNWQ 305 (317)
T ss_pred ccCCCCCCCCcCcccHHHHHHHHhhccccCCCcccCccCCCcCCCCCCCCHHHHHHHHHHhccccceecCCCCCCCCCcc
Confidence 89999999998 79999999999999999999999999975 589999999999999999999999999999999
Q ss_pred cccChhHHHH
Q 003671 659 WLFGERNTQL 668 (804)
Q Consensus 659 w~~~~~~~~~ 668 (804)
|.+++++.++
T Consensus 306 ~~~~~~~~~~ 315 (317)
T cd06594 306 FYSDDETLRH 315 (317)
T ss_pred cccChHHHHh
Confidence 9999887654
No 19
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=6.5e-73 Score=610.97 Aligned_cols=280 Identities=23% Similarity=0.397 Sum_probs=235.7
Q ss_pred cCCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccC---------CCcceeECCCCCCChHHHH
Q 003671 355 TGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTD---------GKKYFTWDRLSFPHPEEMQ 425 (804)
Q Consensus 355 tG~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~---------~~~~ft~d~~~FP~p~~m~ 425 (804)
||+|+|||+||||||||||.|.++++|++|+++|++++||||+||+|++|+. ++++||||+++||||++|+
T Consensus 1 TG~~~~~P~walG~~qsr~~y~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi 80 (292)
T cd06595 1 AGKIPLLPRYAFGNWWSRYWPYSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLL 80 (292)
T ss_pred CCCCCCCchHHHHhHhhCCcCCCHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHHHHH
Confidence 8999999999999999999999999999999999999999999999999864 5678999999999999999
Q ss_pred HHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCC
Q 003671 426 RKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGS 505 (804)
Q Consensus 426 ~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~ 505 (804)
++||++|+|+|+|++|+|+.+..+..|++..+ +..++... +....+|||||++++||.+.+.. ..-.
T Consensus 81 ~~Lh~~G~k~v~~v~P~~~~~~~~~~y~~~~~-~~~~~~~~----------~~~~~~D~tnp~a~~~w~~~~~~--~~~~ 147 (292)
T cd06595 81 QDLHDRGLKVTLNLHPADGIRAHEDQYPEMAK-ALGVDPAT----------EGPILFDLTNPKFMDAYFDNVHR--PLEK 147 (292)
T ss_pred HHHHHCCCEEEEEeCCCcccCCCcHHHHHHHH-hcCCCccc----------CCeEEecCCCHHHHHHHHHHHHH--HHHh
Confidence 99999999999999999987766677887332 22222211 12247899999999998776542 1223
Q ss_pred CCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccc
Q 003671 506 TPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGA 585 (804)
Q Consensus 506 ~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~ 585 (804)
.+++++|+|||||+.|.. .+..+...||. ..+++..+ .++||||||||+|+|+|||++
T Consensus 148 ~Gidg~W~D~~E~~~~~~------------~~~~~~~~~~~-------~~y~~~~~---~~~r~f~lsRs~~~G~qry~~ 205 (292)
T cd06595 148 QGVDFWWLDWQQGNRTRT------------PGLDPLWWLNH-------VHYLDSAR---NGRRPLIFSRWAGLGSHRYPI 205 (292)
T ss_pred cCCcEEEecCCCCccccc------------CCcchHHHHHH-------HHHHHhhc---cCCCcEEEEeecccCCCcCCC
Confidence 578999999999987621 11122223333 34444433 348999999999999999999
Q ss_pred cccCCCcCchHHHHHHHHHHHHHhccCCCccccccCCCCC-CCCHHHHHHHhhcccccccccccCCCCC-CCCCccccCh
Q 003671 586 VWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFG-NPDTELLVRWYQLGAYYPFFRAHAHHDT-KRREPWLFGE 663 (804)
Q Consensus 586 ~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g-~p~~EL~~RW~Q~gaf~P~~R~H~~~~~-~~~ePw~~~~ 663 (804)
+|+|||.|+|++|+.+|+++|++|++|+||||+|||||.| +|++|||+||+|+|||+|+||+|++... .+||||.|++
T Consensus 206 ~WsGD~~s~W~~l~~~i~~~l~~~~sG~p~~g~DiGGF~~~~~~~ELy~RW~Q~gaf~P~~R~H~~~~~~~~~ePW~~g~ 285 (292)
T cd06595 206 GFSGDTIISWASLAFQPYFTATASNIGYGYWSHDIGGHMLGVTDPELYTRWIQFGVFSPILRLHSTKNPFNEKEPWLYEE 285 (292)
T ss_pred ccCCCcccCHHHHHHHHHHHHHHHhcCCCcCCCccCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCCCCccCcccCc
Confidence 9999999999999999999999999999999999999999 7999999999999999999999998765 5899999999
Q ss_pred hHHHHH
Q 003671 664 RNTQLI 669 (804)
Q Consensus 664 ~~~~~~ 669 (804)
++++++
T Consensus 286 ~~~~~~ 291 (292)
T cd06595 286 EASKIM 291 (292)
T ss_pred HHHHhh
Confidence 888765
No 20
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=100.00 E-value=1.8e-68 Score=569.34 Aligned_cols=262 Identities=41% Similarity=0.782 Sum_probs=242.1
Q ss_pred CCCCCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcce--eECCCCCCChHHHHHHHHHcCC
Q 003671 356 GMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYF--TWDRLSFPHPEEMQRKLATKGR 433 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~f--t~d~~~FP~p~~m~~~L~~~g~ 433 (804)
|+|+|||+|+||||||||+|.++++|+++++++++++||||+||+|++|+.++++| +||+++||||++|+++||++|+
T Consensus 1 G~p~~~P~wa~G~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f~~~~d~~~Fpdp~~~i~~l~~~g~ 80 (265)
T cd06589 1 GKPALPPKWAFGYWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDFTFDWDAGKFPNPKSMIDELHDNGV 80 (265)
T ss_pred CCCCCCcHHHHHHHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCceeeeecChhhCCCHHHHHHHHHHCCC
Confidence 89999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred eEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEee
Q 003671 434 HMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWN 513 (804)
Q Consensus 434 k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~ 513 (804)
|+++|++|+| ++||.++++.. ....+++++|+
T Consensus 81 ~~~~~~~P~v----------------------------------------------~~w~~~~~~~~--~~~~Gvdg~w~ 112 (265)
T cd06589 81 KLVLWIDPYI----------------------------------------------REWWAEVVKKL--LVSLGVDGFWT 112 (265)
T ss_pred EEEEEeChhH----------------------------------------------HHHHHHHHHHh--hccCCCCEEec
Confidence 9999999988 99999988632 23467999999
Q ss_pred cCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCcC
Q 003671 514 DMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTA 593 (804)
Q Consensus 514 DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s 593 (804)
|||||+.+++.+.+.. . .++..++++||+|++++++++++++++.. +++|||++|||+|+|+|||+++|+||+.+
T Consensus 113 D~~E~~~~~~~~~~~~--~--~~~~~~~~~hn~y~~~~~~~~~~~~~~~~-~~~r~~~~sRs~~~Gsqry~~~W~GD~~s 187 (265)
T cd06589 113 DMGEPSPGDGNIFTGG--V--VGRVKHEEMHNAYPLLYAEATYEALRKNS-KNKRPFILSRSGYAGSQRYAGMWSGDNTS 187 (265)
T ss_pred cCCCCCcCCCccccCC--c--CCCccHHHHcchhHHHHHHHHHHHHHHhc-CCCCeEEEEcCCcccccCcCceeCCcccC
Confidence 9999998865432211 1 13478999999999999999999999886 45899999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHhccCCCccccccCCCCC-CCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHH
Q 003671 594 EWEQLRVSVPMILTLGLTGMSFSGADVGGFFG-NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIR 670 (804)
Q Consensus 594 ~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g-~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r 670 (804)
+|++||.+|+++|++|++|+||+|+|||||.+ ++++|||+||+|+|+|+|+||+|+......+|||.|++++++++|
T Consensus 188 tW~~l~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~~EL~~RW~Q~g~F~P~~R~H~~~~~~~~epw~~~~~~~~~~r 265 (265)
T cd06589 188 TWGYLRSQIPAGLTMSMSGIPFVGSDIGGFTGGDPSAELYVRWFQFGAFTPIMRFHSWNSPKDTEPWAFDEEVTAIIR 265 (265)
T ss_pred CHHHHHHHHHHHHhhhccCCcccCCCcCCCCCCCCCHHHHHHHHHHhcCCcceecCCCCCCCCcCCCCcCHHHHHhhC
Confidence 99999999999999999999999999999999 899999999999999999999999998889999999999888765
No 21
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=3.9e-62 Score=529.75 Aligned_cols=280 Identities=24% Similarity=0.347 Sum_probs=250.1
Q ss_pred CCCccccccccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEE
Q 003671 359 SMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTI 438 (804)
Q Consensus 359 ~lpP~walG~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~i 438 (804)
..+|.|...+ +...+.+|++|+++++++++++||||+||+|++|+++.++|+||+++||||++|+++||++|+|+++|
T Consensus 12 ~~~p~W~~W~--~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g~f~~d~~~FPdp~~mi~~l~~~G~k~~l~ 89 (303)
T cd06592 12 FRSPIWSTWA--RYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYGDFDFDPTKFPDPKGMIDQLHDLGFRVTLW 89 (303)
T ss_pred hCCCccCChh--hhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCCccccChhhCCCHHHHHHHHHHCCCeEEEE
Confidence 5789999744 34677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccccCCChhhhHHHHHcCceEEcCCC-CCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecCCC
Q 003671 439 VDPHIKRDDSYWLHNEATEKGYYVKDATK-RDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNE 517 (804)
Q Consensus 439 idP~i~~~~~y~~~~~~~~~~~~vk~~~g-~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnE 517 (804)
++|+|+.++ +.|+++.++|+|||+++| .++.+.+|||.+++||||||+|++||.++++.. ....+++++|+||||
T Consensus 90 i~P~i~~~s--~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~--~~~~Gvdg~w~D~~E 165 (303)
T cd06592 90 VHPFINTDS--ENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSL--QEKYGIDSFKFDAGE 165 (303)
T ss_pred ECCeeCCCC--HHHHhhhhCCeEEECCCCCCCcccceecCCcceEeCCCHHHHHHHHHHHHHH--HHHhCCcEEEeCCCC
Confidence 999999765 689999999999999998 578889999999999999999999999988642 223578999999999
Q ss_pred CCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCcCchHH
Q 003671 518 PSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNTAEWEQ 597 (804)
Q Consensus 518 ps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~ 597 (804)
|+. +|.+..+. .+...||.|..+++++.++ .+||+++||+|+|+|+++++|+||+.++|++
T Consensus 166 ~~~-------~p~~~~~~---~~~~~~n~y~~~~~~~~~~---------~~~~~~~Rsg~~g~~~~~~~w~GD~~s~W~~ 226 (303)
T cd06592 166 ASY-------LPQDYVTE---DPLLNPDEYTRLYAEMVAE---------FGDLIEVRAGWRSQGLPLFVRMMDKDSSWGG 226 (303)
T ss_pred ccc-------CCcccccC---CcccCHHHHHHHHHHHHHh---------hccceEEEeeeecCCCCeeEEcCCCCCCCCC
Confidence 974 46666665 3567899999888876532 2489999999999988889999999999998
Q ss_pred H---HHHHHHHHHHhccCCCccccc-cCCCCC-------CCCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHH
Q 003671 598 L---RVSVPMILTLGLTGMSFSGAD-VGGFFG-------NPDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNT 666 (804)
Q Consensus 598 L---~~si~~~L~~~l~G~p~~g~D-igGF~g-------~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~ 666 (804)
| +.+|+++|++|++|+||+|+| ||||.+ .+++|||+||+|+|+|+|+||+| +|||.|+++++
T Consensus 227 ~~gl~~~i~~~L~~~lsG~~~w~~D~iGGf~~~~~~~~~~~~~EL~~RW~q~g~f~P~~R~h-------~~PW~~~~e~~ 299 (303)
T cd06592 227 DNGLKSLIPTALTMGLLGYPFVLPDMIGGNAYGGNSDDELPDKELYIRWLQLSAFLPVMQFS-------IAPWQYDDEVV 299 (303)
T ss_pred CcCHHHHHHHHHHhhccCCcccCCCccCCccccccccCCCCCHHHHHHHHHHHHhChhhhcc-------cCCccCCHHHH
Confidence 7 999999999999999999999 799975 47999999999999999999999 69999999998
Q ss_pred HHHH
Q 003671 667 QLIR 670 (804)
Q Consensus 667 ~~~r 670 (804)
+++|
T Consensus 300 ~~~~ 303 (303)
T cd06592 300 EIAK 303 (303)
T ss_pred HhhC
Confidence 8765
No 22
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=6.2e-48 Score=397.73 Aligned_cols=240 Identities=25% Similarity=0.502 Sum_probs=193.9
Q ss_pred CCCCCCcccccccc--cc----ccCC---------------CCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeEC
Q 003671 356 GMPSMPPLFSIAYH--QC----RWNY---------------RDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWD 414 (804)
Q Consensus 356 G~p~lpP~walG~~--q~----rw~Y---------------~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d 414 (804)
|+|.|||+|||++- -| -|.+ +.+.++++|+++|+++++|+.-|--+..|-.++
T Consensus 1 g~p~~~p~~a~~~g~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~y~~~~~plgw~lpndgyg~~y------ 74 (261)
T cd06596 1 GRPFLLPEYALYLGDADCYNRDYWRKVPEGTSDGGLNGEKESTTDDARKVADKYKENDMPLGWMLPNDGYGCGY------ 74 (261)
T ss_pred CCCccchHHHHhccchhhhccCccccCCCccccccCCCCcccchhhHHHHHHHHHhcCCCceeeccCCCCcchH------
Confidence 89999999998652 22 2333 234678999999999999999887776665543
Q ss_pred CCCCCChHHHHHHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHH
Q 003671 415 RLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWG 494 (804)
Q Consensus 415 ~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~ 494 (804)
-+.+++++.++++|++.-+|..-.+. ..-+|-
T Consensus 75 ----~~l~~~~~~~~~~g~~~glwt~~~l~-----~~~~ev--------------------------------------- 106 (261)
T cd06596 75 ----ENLKEVVDYLHANGVETGLWTQSGLR-----DIAKEV--------------------------------------- 106 (261)
T ss_pred ----HHHHHHHHHHHHcCCccccccccchh-----hhhhhh---------------------------------------
Confidence 57899999999999998888432110 000000
Q ss_pred hhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEec
Q 003671 495 TKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLAR 574 (804)
Q Consensus 495 ~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsR 574 (804)
+..+.-....| ..+.+ . +=.|++.+++++++++++. +++|||||||
T Consensus 107 ---------~~~g~~~~k~D-----------------v~w~g--~----gy~~~l~~~ka~yeg~~~~--~~~RpfiltR 152 (261)
T cd06596 107 ---------GAAGVRARKTD-----------------VAWVG--A----GYSFALNGVKAAADGIESN--SNARPFIVTV 152 (261)
T ss_pred ---------ccCCceEEecc-----------------chhhc--c----chhHHHHHHHHHHHHHHhC--CCCCCEEEEe
Confidence 00011111111 11111 0 1237889999999999887 4599999999
Q ss_pred cccCCCCcccccccCCCcCchHHHHHHHHHHHHHhccCCCccccccCCCCCCCCHHHHHHHhhcccccccccccCCCCCC
Q 003671 575 AFFAGSQRYGAVWTGDNTAEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTELLVRWYQLGAYYPFFRAHAHHDTK 654 (804)
Q Consensus 575 S~f~Gsqry~~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~EL~~RW~Q~gaf~P~~R~H~~~~~~ 654 (804)
|+|+|+|||+++|+|||.++|++|+.+|+++|++||+|+||+|+|||||+|+ ++|||+||+|+|+|+|+||+|++.++.
T Consensus 153 sg~aGsQRy~~~WsGD~~stWe~Lr~sI~~~L~~gLsG~p~~G~DIGGF~g~-~~EL~vRW~Q~gaF~P~~R~h~~~~~~ 231 (261)
T cd06596 153 DGWAGTQRYAGIWTGDQSGSWEYIRFHIPTYIGSGLSGQPNTTSDVDGIFGG-SPETYTRDLQWKAFTPVLMTMSGWAAN 231 (261)
T ss_pred cCccccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhcCCCcCccccCcCCCC-CHHHHHHHHHHHHhhhhhhhccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999998899
Q ss_pred CCCccccChhHHHHHHHHHHHHHhhhHHHH
Q 003671 655 RREPWLFGERNTQLIREAIHVRYMFLPYFY 684 (804)
Q Consensus 655 ~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Y 684 (804)
+||||.|++++++++|++|++||+||||||
T Consensus 232 ~rEPW~fge~~~~i~R~~l~LRY~LlPYiY 261 (261)
T cd06596 232 DKQPWVFGEPYTSINRDYLKLKMRLMPYIY 261 (261)
T ss_pred CCCCeeCCHHHHHHHHHHHHHHHHhhCccC
Confidence 999999999999999999999999999998
No 23
>PF13802 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1XSI_F 1XSK_D 1WE5_E 2F2H_F 1XSJ_F 2G3N_C 2G3M_F 3POC_A 3MKK_A 3PHA_A ....
Probab=99.56 E-value=5e-15 Score=125.23 Aligned_cols=68 Identities=37% Similarity=0.633 Sum_probs=50.0
Q ss_pred CCceeeCCCCCCCCCCCCCCCCCCCCCCceeeeeccccccCCCCCCCCccceeEEEeeCCCCceEEEEEecCCceEEE
Q 003671 225 SDYVYGIPERATSFALKPTRGPNVEESEPYRLFNLDVFEYLHDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQID 302 (804)
Q Consensus 225 ~~~~YGlGE~~~~l~l~~t~g~~~~~~~~y~l~n~D~~~~~~~~~~~lYgsiPf~~~~~~~~~~~Gvf~~ns~~~~vd 302 (804)
+|++||||||+++++++ +++|++||+|.+.+...+..+||++|||+|+++. ++++||||+|+++++||
T Consensus 1 de~~yGlGE~~~~l~~~---------g~~~~~~n~D~~~~~~~~~~~lY~siPf~~~~~s-~~~yGvf~dn~~~~~~D 68 (68)
T PF13802_consen 1 DERFYGLGERFGPLNRR---------GKRYRLWNTDAFGYNGPSSDPLYKSIPFFIAHRS-GKGYGVFFDNPSRTFFD 68 (68)
T ss_dssp T-EEEEESS-SS-SS-T---------TEEEEE-B---TSS-GTTBS-BSEEEEEEEEEEC-TCEEEEEEE-SS-EEEE
T ss_pred CCcEEcccccCCCcccC---------CcEEEEEECcCCCcCCCcCccccccEeEEEEeCC-CCEEEEEEeCCCceEEC
Confidence 48999999999999875 5799999999999887777899999999998774 67999999999999987
No 24
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=98.99 E-value=3.7e-09 Score=118.60 Aligned_cols=293 Identities=20% Similarity=0.232 Sum_probs=159.4
Q ss_pred CCHHHHHHHHHHhc----CC----CCCCcccccccccccc----CCCCHHHHHHHHHhhhcCCCCceEEEeeccccC---
Q 003671 342 PGPKDVVRQYTSVT----GM----PSMPPLFSIAYHQCRW----NYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTD--- 406 (804)
Q Consensus 342 ~tp~~vi~~Y~~lt----G~----p~lpP~walG~~q~rw----~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~--- 406 (804)
....++.++|+++. -+ ..-|| .|| |.| ..-+++.+++.++.+.+.| ++.+.+|..|..
T Consensus 14 ~gl~~~s~~~h~~~r~~~~~~~~~~~~~p---v~~--nsW~~~~~d~~e~~i~~~a~~~~~~G--~e~fviDDGW~~~r~ 86 (394)
T PF02065_consen 14 QGLNGMSQRFHRFVRRHLLRPPWRDKPPP---VGW--NSWEAYYFDITEEKILELADAAAELG--YEYFVIDDGWFGGRD 86 (394)
T ss_dssp BHHHHHHHHHHHHHHHHTSTTTTTTSS-----EEE--ESHHHHTTG--HHHHHHHHHHHHHHT---SEEEE-SSSBCTES
T ss_pred CCHHHHHHHHHHHHHHhcCCCccCCCCCc---eEE--EcccccCcCCCHHHHHHHHHHHHHhC--CEEEEEcCccccccC
Confidence 35677777777762 22 22233 232 344 2357889999999997776 589999999863
Q ss_pred ----CCcceeECCCCCCC-hHHHHHHHHHcCCeEEEEecCccc-cCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcc
Q 003671 407 ----GKKYFTWDRLSFPH-PEEMQRKLATKGRHMVTIVDPHIK-RDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSS 480 (804)
Q Consensus 407 ----~~~~ft~d~~~FP~-p~~m~~~L~~~g~k~v~iidP~i~-~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~ 480 (804)
+.+++..|+++||+ .+.+++.+|++|+|+.+|+.|.+. .++ .+|++- -+++++..+.....+ ....
T Consensus 87 ~d~~~~GdW~~~~~kFP~Gl~~l~~~i~~~Gmk~GlW~ePe~v~~~S--~l~~~h--Pdw~l~~~~~~~~~~----r~~~ 158 (394)
T PF02065_consen 87 DDNAGLGDWEPDPKKFPNGLKPLADYIHSLGMKFGLWFEPEMVSPDS--DLYREH--PDWVLRDPGRPPTLG----RNQY 158 (394)
T ss_dssp TTTSTTSBECBBTTTSTTHHHHHHHHHHHTT-EEEEEEETTEEESSS--CHCCSS--BGGBTCCTTSE-ECB----TTBE
T ss_pred CCcccCCceeEChhhhCCcHHHHHHHHHHCCCeEEEEeccccccchh--HHHHhC--ccceeecCCCCCcCc----ccce
Confidence 34678899999999 899999999999999999999864 333 455432 356666544332222 2446
Q ss_pred cccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHH
Q 003671 481 YLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLL 560 (804)
Q Consensus 481 ~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~ 560 (804)
.+|+++|++++|..+.+.. .....++++++.|||....- +.+. +.+...|+.+..+|. ..+.|+
T Consensus 159 vLD~~~pev~~~l~~~i~~--ll~~~gidYiK~D~n~~~~~-------~~~~-~~~~~~~~~~~~~y~------l~~~L~ 222 (394)
T PF02065_consen 159 VLDLSNPEVRDYLFEVIDR--LLREWGIDYIKWDFNRDITE-------AGSP-SLPEGYHRYVLGLYR------LLDRLR 222 (394)
T ss_dssp EB-TTSHHHHHHHHHHHHH--HHHHTT-SEEEEE-TS-TTS--------SST-TS-GHHHHHHHHHHH------HHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHH--HHHhcCCCEEEeccccCCCC-------CCCC-CchHHHHHHHHHHHH------HHHHHH
Confidence 8999999999999988752 22235789999999974321 1111 011112222222222 245566
Q ss_pred HhcCCCCCCeEEeccccCCCCcc-------c-ccccCCCcCchHHHHHHHHHHHHHhccCCCcc--cc---ccCCCCCCC
Q 003671 561 KRENGKDRPFVLARAFFAGSQRY-------G-AVWTGDNTAEWEQLRVSVPMILTLGLTGMSFS--GA---DVGGFFGNP 627 (804)
Q Consensus 561 ~~~~~~~RpfilsRS~f~Gsqry-------~-~~WtGDn~s~W~~L~~si~~~L~~~l~G~p~~--g~---DigGF~g~p 627 (804)
++.+. |+--+.-.|-+|. . ..|+-|+...++.++.+.- .++ .+|-. |+ ++-.-....
T Consensus 223 ~~~P~-----v~iE~CssGG~R~D~g~l~~~~~~w~SD~tda~~R~~iq~g--~s~---~~p~~~~~~hv~~~p~~~~~r 292 (394)
T PF02065_consen 223 ARFPD-----VLIENCSSGGGRFDPGMLYYTPQSWTSDNTDALERLRIQYG--TSL---FYPPEYMGAHVSASPNHQTGR 292 (394)
T ss_dssp HHTTT-----SEEEE-BTTBTTTSHHHHCCSSEEESBST-SHHHHHHHHHH--HCT---TSSGGGEEEEEEHSS-TTTHH
T ss_pred HhCCC-----cEEEeccCCCCccccchheeccccccCCccchHHHhhhhcc--ccc---ccCHHHhCCeEEeccccccCC
Confidence 55421 2333333454443 3 4799999999886665542 222 23311 11 111000001
Q ss_pred CHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHH
Q 003671 628 DTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFY 684 (804)
Q Consensus 628 ~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Y 684 (804)
...|-.|=. .+.|- .+-. .-.+-...++-.+.++++|.+=.++.+.+-
T Consensus 293 ~~~l~~r~~-~a~~g-~~g~-------e~dl~~ls~~e~~~~~~~ia~YK~~r~li~ 340 (394)
T PF02065_consen 293 TTPLEFRAH-VAMFG-RLGL-------ELDLTKLSEEELAAVKEQIAFYKSIRPLIQ 340 (394)
T ss_dssp HGGHHHHHH-HHTCS-EEEE-------ESTGCGS-HHHHHHHHHHHHHHHHCHHHHH
T ss_pred cccceechh-hhhcC-Ccee-------ccCcccCCHHHHHHHHHHHHHHHhHHHHhc
Confidence 123433432 12221 1111 123344556677888999887766666554
No 25
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=98.07 E-value=3.9e-05 Score=86.63 Aligned_cols=302 Identities=17% Similarity=0.190 Sum_probs=179.3
Q ss_pred EEEecCCHHHHHHHHHHhcCCCCCCcccc---ccccccccC--C--CCHHHHHHHHHhhhcCCCCceEEEeeccccCC--
Q 003671 337 FFFVGPGPKDVVRQYTSVTGMPSMPPLFS---IAYHQCRWN--Y--RDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDG-- 407 (804)
Q Consensus 337 y~f~G~tp~~vi~~Y~~ltG~p~lpP~wa---lG~~q~rw~--Y--~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~-- 407 (804)
.+..++....+.+.|++++++--+|--|+ =-.+.|.|. | .+++++.+.++..++ ++++.+.||..|..+
T Consensus 260 v~~edqgl~~lsq~y~~~v~~~i~~~~~~~kprPi~~nsWea~Yfd~t~e~ile~vk~akk--~gvE~FvlDDGwfg~rn 337 (687)
T COG3345 260 VVLEDQGLNGLSQKYAELVRMEIVPRPRVKKPRPIGWNSWEAYYFDFTEEEILENVKEAKK--FGVELFVLDDGWFGGRN 337 (687)
T ss_pred EEEcCCCcchHHHHHHHHHHhhcCcccccCCCCcceeeceeeeeecCCHHHHHHHHHHHhh--cCeEEEEEccccccccC
Confidence 34457788999999999999866552222 112347773 3 478888888887665 558999999998733
Q ss_pred -----CcceeECCCCCCC-hHHHHHHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCccc
Q 003671 408 -----KKYFTWDRLSFPH-PEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSY 481 (804)
Q Consensus 408 -----~~~ft~d~~~FP~-p~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~ 481 (804)
-+||-.+.++||. .++|++.++++|.+.-+|+-|.+...+ -++|++- -+++|| .+|.+.... -+...
T Consensus 338 dd~~slGDWlv~seKfPsgiE~li~~I~e~Gl~fGIWlePemvs~d-SdlfrqH--PDWvvk-~~G~p~~~~---Rnqyv 410 (687)
T COG3345 338 DDLKSLGDWLVNSEKFPSGIEELIEAIAENGLIFGIWLEPEMVSED-SDLFRQH--PDWVVK-VNGYPLMAG---RNQYV 410 (687)
T ss_pred cchhhhhceecchhhccccHHHHHHHHHHcCCccceeecchhcccc-hHHHhhC--CCeEEe-cCCcccccc---ccchh
Confidence 3467779999999 899999999999999999999875432 2678765 578898 778763211 13345
Q ss_pred ccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHH
Q 003671 482 LDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLK 561 (804)
Q Consensus 482 ~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~ 561 (804)
+|+.||.+...-.+..... .....++++.-|||-- .+ ..+...++...+.. .-+|-+ ++.|.
T Consensus 411 l~~s~p~vv~~l~~~l~ql--l~~~~v~ylkwdmnr~-------l~-klg~~~~~~l~qqr-y~ly~l------~~~l~- 472 (687)
T COG3345 411 LWLSNPIVVLDLSEDLVQL--LLFHLVSYLKWDMNRE-------LF-KLGFLFWGALPQQR-YQLYRL------FDQLN- 472 (687)
T ss_pred hhccChHHHHHhhhHHHHH--HHhhhHHHHHHHhCcc-------ee-ecCCCCCccccchH-HHHHHH------HHHhh-
Confidence 6677777666555433211 1112355666688841 11 11221222111111 112222 22222
Q ss_pred hcCCCCCCeEEeccccCCCCc-------cc-ccccCCCcCchHHHHHHHHHHHHHhccCCC--ccccccCCCCCCCCHHH
Q 003671 562 RENGKDRPFVLARAFFAGSQR-------YG-AVWTGDNTAEWEQLRVSVPMILTLGLTGMS--FSGADVGGFFGNPDTEL 631 (804)
Q Consensus 562 ~~~~~~RpfilsRS~f~Gsqr-------y~-~~WtGDn~s~W~~L~~si~~~L~~~l~G~p--~~g~DigGF~g~p~~EL 631 (804)
.+-|-|+--|+-.|..| |+ ..|+-|+...=+.|+.+-- +-.=+| ++|+-|++ +|. -
T Consensus 473 ----~k~~~i~FeScasGg~r~d~gml~~~~~~w~Sd~~dAi~r~~iqrg-----~s~~~P~~~mGaHi~~---~p~--h 538 (687)
T COG3345 473 ----LKFPHILFESCASGGERIDKGMLEYSPQLWCSDLTDAIGRLDIQRG-----GSYTYPPESMGAHISA---VPN--H 538 (687)
T ss_pred ----hcCCCchhhhhcccccccchHHhhhcccccCCCCcchhhhcccccc-----CcccCChHHhhhhccC---CCc--H
Confidence 25566776777666554 34 3799888654444432211 111245 67777776 333 2
Q ss_pred HHHHhhccccc---ccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHH
Q 003671 632 LVRWYQLGAYY---PFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYF 683 (804)
Q Consensus 632 ~~RW~Q~gaf~---P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~ 683 (804)
-+||+---.+- -+|++-+ ..-.+-...++-++.+.+.|.+.-.|-|-+
T Consensus 539 ~~~rm~~l~~rg~~a~~g~~g----~elD~~~lsdeek~~~akqialyke~r~vl 589 (687)
T COG3345 539 QARRMTSLETRGLVAHFGFWG----YELDCTILSDEEKDLTAKQIALYKELRPVL 589 (687)
T ss_pred HHhhhhhhhhhhHHHHhhhhc----cCCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35776443332 3333322 123445556667888888888766665543
No 26
>PLN03231 putative alpha-galactosidase; Provisional
Probab=97.99 E-value=0.00013 Score=80.77 Aligned_cols=190 Identities=15% Similarity=0.147 Sum_probs=118.5
Q ss_pred CCHHHHHHHHH----hhhcCCCCceEEEeecccc--------------------CCCcceeECCCCCCC------hHHHH
Q 003671 376 RDEEDVEQVDS----KFDEHDIPYDVLWLDIEHT--------------------DGKKYFTWDRLSFPH------PEEMQ 425 (804)
Q Consensus 376 ~~~~~v~~v~~----~~~~~~iP~D~iwlDi~~~--------------------~~~~~ft~d~~~FP~------p~~m~ 425 (804)
-+|++|++.++ .++++| ++-|.+|..|+ +..+.+.-|+++||+ .+.+.
T Consensus 15 i~E~~i~~~Ad~v~~gL~~~G--Y~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~G~l~pd~~rFPs~~~~~G~k~lA 92 (357)
T PLN03231 15 ISEEQFLENAKIVSETLKPHG--YEYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKWGRPLPDPKRWPSTTGGKGFAPIA 92 (357)
T ss_pred cCHHHHHHHHHHHHcchHHhC--CEEEEECCcccccccccccccccccccccccCCCCCcccCcccCCCCccccCcHHHH
Confidence 37888877765 444454 47888887775 334567889999996 89999
Q ss_pred HHHHHcCCeEEEEecCccccCC---ChhhhHH-H------HHcCceEEcCCCCCeeeeecC-CCcccccCCCHhHHHHHH
Q 003671 426 RKLATKGRHMVTIVDPHIKRDD---SYWLHNE-A------TEKGYYVKDATKRDYDGWCWP-GSSSYLDMLNPEIRTWWG 494 (804)
Q Consensus 426 ~~L~~~g~k~v~iidP~i~~~~---~y~~~~~-~------~~~~~~vk~~~g~~~~g~~Wp-G~~~~~Dftnp~a~~ww~ 494 (804)
+.+|++|.|+-+.++|++.+.. ++++.-. + ..+++.+.+ ....|. +.-..+|...|.+++|+.
T Consensus 93 DyvHs~GLKfGIY~~~G~~tca~~~~~pi~G~~Gs~g~~~~a~Dia~~~------~~c~~~~~~~~~v~~~~~gaq~y~~ 166 (357)
T PLN03231 93 AKVHALGLKLGIHVMRGISTTAVKKKTPILGAFKSNGHAWNAKDIALMD------QACPWMQQCFVGVNTSSEGGKLFIQ 166 (357)
T ss_pred HHHHhCCcceEEEecCCccchhcccCCccCCCCcccccccchhhhcccc------ccccccccccccccccchhHHHHHH
Confidence 9999999999999999987532 1111100 0 001111111 112233 233479999999999998
Q ss_pred hhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEec
Q 003671 495 TKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLAR 574 (804)
Q Consensus 495 ~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsR 574 (804)
+..+. | .+.++|+++.|-..+. . + .+ ...|. +..++|.+. .||+++|=
T Consensus 167 ~~a~~--f-A~WGVDylK~D~c~~~-----~-----~-------~~---~~~y~-----~m~~AL~~t----GRpIv~Sl 214 (357)
T PLN03231 167 SLYDQ--Y-ASWGIDFIKHDCVFGA-----E-----N-------PQ---LDEIL-----TVSKAIRNS----GRPMIYSL 214 (357)
T ss_pred HHHHH--H-HHhCCCEEeecccCCC-----C-----c-------cc---HHHHH-----HHHHHHHHh----CCCeEEEe
Confidence 87653 2 2467999999943210 0 0 00 01232 334556543 69999987
Q ss_pred cccCC--------CCcccccc--cCCCcCchHHHHHHHHHH
Q 003671 575 AFFAG--------SQRYGAVW--TGDNTAEWEQLRVSVPMI 605 (804)
Q Consensus 575 S~f~G--------sqry~~~W--tGDn~s~W~~L~~si~~~ 605 (804)
|-..+ .+.++..| +||...+|+.+...+...
T Consensus 215 c~g~~~~~~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~ 255 (357)
T PLN03231 215 SPGDGATPGLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVA 255 (357)
T ss_pred cCCCCCCchhhhhhhhhcCcccccCCcccchhhHHHHHHHH
Confidence 63111 13345567 799999999887766544
No 27
>PLN02229 alpha-galactosidase
Probab=97.90 E-value=0.00015 Score=81.83 Aligned_cols=177 Identities=18% Similarity=0.243 Sum_probs=112.9
Q ss_pred cCCCCCCccccccccccccCC----CCHHHHHHHHHhhhcCCCC---ceEEEeeccccC----CCcceeECCCCCCC-hH
Q 003671 355 TGMPSMPPLFSIAYHQCRWNY----RDEEDVEQVDSKFDEHDIP---YDVLWLDIEHTD----GKKYFTWDRLSFPH-PE 422 (804)
Q Consensus 355 tG~p~lpP~walG~~q~rw~Y----~~~~~v~~v~~~~~~~~iP---~D~iwlDi~~~~----~~~~ft~d~~~FP~-p~ 422 (804)
.|....|| +|+ +.|+. -+|+.+++.++.+.+.|.. ++-|.+|..|.. ..+.+..|+++||+ .+
T Consensus 57 ngla~tPp---mGW--nSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~G~l~~d~~rFP~G~k 131 (427)
T PLN02229 57 NGLARTPQ---MGW--NSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPKTFPSGIK 131 (427)
T ss_pred CCccCCCC---ceE--EchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCCCCEEEChhhcCCcHH
Confidence 55667777 455 33442 3788999988886544333 688999998863 34578999999997 89
Q ss_pred HHHHHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccc
Q 003671 423 EMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENY 502 (804)
Q Consensus 423 ~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~ 502 (804)
.+.+.+|++|.|+-++.|+++.+-.+| ||. .+.....| +.|.
T Consensus 132 ~ladyiH~~GlKfGIy~d~G~~TC~~~--------------------------pGS---~g~e~~DA-----~~fA---- 173 (427)
T PLN02229 132 LLADYVHSKGLKLGIYSDAGVFTCQVR--------------------------PGS---LFHEVDDA-----DIFA---- 173 (427)
T ss_pred HHHHHHHHCCCceEEeccCCCcccCCC--------------------------CCC---ccHHHHHH-----HHHH----
Confidence 999999999999999999988743321 333 11111222 1221
Q ss_pred cCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccCCC--
Q 003671 503 VGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFAGS-- 580 (804)
Q Consensus 503 ~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~Gs-- 580 (804)
..++|+++.|-.-.. + .+....|+. ..++|.+. .||+++|=+-|.-.
T Consensus 174 --~WGVDylK~D~C~~~-----------------~---~~~~~~y~~-----m~~AL~~t----GRpI~~SlC~WG~~~p 222 (427)
T PLN02229 174 --SWGVDYLKYDNCYNL-----------------G---IKPIERYPP-----MRDALNAT----GRSIFYSLCEWGVDDP 222 (427)
T ss_pred --HcCCCEEEecCCCCC-----------------C---cchhHHHHH-----HHHHHHhh----CCCcEEEecCCCCCCH
Confidence 256888988854210 0 011223432 23455443 69999885443211
Q ss_pred ----Ccccccc--cCCCcCchHHHHHHHHHH
Q 003671 581 ----QRYGAVW--TGDNTAEWEQLRVSVPMI 605 (804)
Q Consensus 581 ----qry~~~W--tGDn~s~W~~L~~si~~~ 605 (804)
+.++..| +||...+|+.+...+...
T Consensus 223 ~~w~~~~~n~WR~s~DI~d~W~sv~~i~~~~ 253 (427)
T PLN02229 223 ALWAGKVGNSWRTTDDINDTWASMTTIADLN 253 (427)
T ss_pred HHHHHhhcCeeeccCCcccccccHHHHHHHH
Confidence 2456677 799999999887766543
No 28
>PLN02899 alpha-galactosidase
Probab=97.87 E-value=0.00046 Score=80.15 Aligned_cols=206 Identities=17% Similarity=0.214 Sum_probs=122.2
Q ss_pred CCCCCCccccccccccccC-C---CCHHHHHHHHH----hhhcCCCCceEEEeeccccCC-----------------Ccc
Q 003671 356 GMPSMPPLFSIAYHQCRWN-Y---RDEEDVEQVDS----KFDEHDIPYDVLWLDIEHTDG-----------------KKY 410 (804)
Q Consensus 356 G~p~lpP~walG~~q~rw~-Y---~~~~~v~~v~~----~~~~~~iP~D~iwlDi~~~~~-----------------~~~ 410 (804)
|....|| +||. -|+ | -+|++|++.++ +++++| ++-|.+|..|+.. .+.
T Consensus 26 glA~TPP---MGWN--SWn~f~~~I~E~~i~~~Ad~vs~GLk~~G--Y~YVnIDDcW~~~~~~g~~~~s~g~~~~D~~Gr 98 (633)
T PLN02899 26 QLASFPP---RGWN--SYDSFSWIVSEEEFLQNAEIVSQRLLPFG--YEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWGR 98 (633)
T ss_pred cccCCCC---CCCc--chhhhccCCCHHHHHHHHHHHHcchHhhC--CeEEEEccccccccccccccccccccccCCCCC
Confidence 4455677 4653 243 2 36777777665 344444 4778888888632 345
Q ss_pred eeECCCCCCC------hHHHHHHHHHcCCeEEEEecCccccCC---Chhh--------hHHHHHcCceEEcCCCCCeeee
Q 003671 411 FTWDRLSFPH------PEEMQRKLATKGRHMVTIVDPHIKRDD---SYWL--------HNEATEKGYYVKDATKRDYDGW 473 (804)
Q Consensus 411 ft~d~~~FP~------p~~m~~~L~~~g~k~v~iidP~i~~~~---~y~~--------~~~~~~~~~~vk~~~g~~~~g~ 473 (804)
+..|++|||+ .+.+.+.+|++|.|+-+.+++++.+.. +.++ |.+ .-.++..++. +.+-.-.
T Consensus 99 LvPDp~RFPSs~~g~GmK~LADYVHskGLKFGIY~~~Gi~tcA~~~~~PI~gs~~g~~y~~-s~~~~~a~DI-a~~~~tC 176 (633)
T PLN02899 99 PIPDPGRWPSSRGGKGFTEVAEKVHAMGLKFGIHVMRGISTQAVNANTPILDAVKGGAYEE-SGRQWRAKDI-ALKERAC 176 (633)
T ss_pred CccCcccCCCCccCCCcHHHHHHHHhCCcceEEEecCCCcccccccCCccccccccccccc-cccccchhhc-ccccccc
Confidence 7889999995 899999999999999999999986421 1111 110 0011222221 0000001
Q ss_pred ec-CCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHH
Q 003671 474 CW-PGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFH 552 (804)
Q Consensus 474 ~W-pG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~ 552 (804)
-| |..---+|...+.+++|..+.++. | ...++|+++.|-.-+ +..+. +-|
T Consensus 177 ~w~~~g~~~vDa~~~~g~a~~~Sla~t--f-AsWGVDyLKyD~c~~------------~~~~~---------~ey----- 227 (633)
T PLN02899 177 AWMSHGFMSVNTKLGAGKAFLRSLYDQ--Y-AEWGVDFVKHDCVFG------------DDFDL---------EEI----- 227 (633)
T ss_pred ccCCCCcccccccccchhhhhHHHHHH--H-HHhCCCEEEEcCCCC------------CCCCh---------HHH-----
Confidence 12 111124788889999999876542 2 246899999994211 00110 112
Q ss_pred HHhHHHHHHhcCCCCCCeEEeccccCCCC----------cccccc--cCCCcCchHHHHHHHHHH
Q 003671 553 MATSDGLLKRENGKDRPFVLARAFFAGSQ----------RYGAVW--TGDNTAEWEQLRVSVPMI 605 (804)
Q Consensus 553 ~at~~~l~~~~~~~~RpfilsRS~f~Gsq----------ry~~~W--tGDn~s~W~~L~~si~~~ 605 (804)
.+..++|.+. .||+++|=|- |.+ .++..| +||...+|+.+...+...
T Consensus 228 ~~ms~AL~aT----GRPIvySLsp--G~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~ 286 (633)
T PLN02899 228 TYVSEVLKEL----DRPIVYSLSP--GTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVS 286 (633)
T ss_pred HHHHHHHHHh----CCCeEEEecC--CcccchhhhhhhhccCccceecCCcccchHHHHHHHHHH
Confidence 2335666543 6999998873 332 345567 699999999887766443
No 29
>PLN02692 alpha-galactosidase
Probab=97.78 E-value=0.00073 Score=76.00 Aligned_cols=189 Identities=17% Similarity=0.302 Sum_probs=119.5
Q ss_pred HHHHHHHHHHhcCCCCCCccccccccccccC-C---CCHHHHHHHHHhhhcCCC---CceEEEeecccc----CCCccee
Q 003671 344 PKDVVRQYTSVTGMPSMPPLFSIAYHQCRWN-Y---RDEEDVEQVDSKFDEHDI---PYDVLWLDIEHT----DGKKYFT 412 (804)
Q Consensus 344 p~~vi~~Y~~ltG~p~lpP~walG~~q~rw~-Y---~~~~~v~~v~~~~~~~~i---P~D~iwlDi~~~----~~~~~ft 412 (804)
-.++.+....--|....|| +|| |.|+ | -+|+.+++.++.+.+.|+ .++-|.+|..|. +..+.+.
T Consensus 39 ~~~~~~~~~~~ngla~tPp---mGW--nSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~G~~~ 113 (412)
T PLN02692 39 DSEILRRNLLANGLGITPP---MGW--NSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLV 113 (412)
T ss_pred hhhhhhhhcccCcCcCCCc---ceE--EchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCCCCee
Confidence 3455555444567777888 455 4454 2 378899998887765544 478899998886 4456789
Q ss_pred ECCCCCCC-hHHHHHHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHH
Q 003671 413 WDRLSFPH-PEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRT 491 (804)
Q Consensus 413 ~d~~~FP~-p~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ 491 (804)
.|+++||+ .+.+.+.+|++|.|+-++.|++..+-.. .-|| +..
T Consensus 114 ~d~~kFP~G~k~ladyiH~~GLKfGIy~d~G~~tC~~-------------------------~~pG-----------S~g 157 (412)
T PLN02692 114 PKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCSK-------------------------TMPG-----------SLG 157 (412)
T ss_pred eChhhcCCcHHHHHHHHHHCCCceEEEecCCccccCC-------------------------CCCC-----------chH
Confidence 99999998 8999999999999999999987542110 0133 233
Q ss_pred HHHhhcccccccCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeE
Q 003671 492 WWGTKFSYENYVGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFV 571 (804)
Q Consensus 492 ww~~~~~~~~~~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~Rpfi 571 (804)
+...-.+ .| ...++|+++.|-.-. + + .+....|.. -.++|.+. .||++
T Consensus 158 ~e~~DA~--~f-A~WGvDylK~D~C~~------~-----------~---~~~~~~y~~-----m~~AL~~t----GRpI~ 205 (412)
T PLN02692 158 HEEQDAK--TF-ASWGIDYLKYDNCNN------D-----------G---SKPTVRYPV-----MTRALMKA----GRPIF 205 (412)
T ss_pred HHHHHHH--HH-HhcCCCEEeccccCC------C-----------C---cchhHHHHH-----HHHHHHHh----CCCeE
Confidence 3333222 12 235788898885421 0 0 011122332 23455443 59999
Q ss_pred EeccccCCC------Ccccccc--cCCCcCchHHHHHHHHHH
Q 003671 572 LARAFFAGS------QRYGAVW--TGDNTAEWEQLRVSVPMI 605 (804)
Q Consensus 572 lsRS~f~Gs------qry~~~W--tGDn~s~W~~L~~si~~~ 605 (804)
+|=+.+.-. ..++..| +||...+|+.+...+...
T Consensus 206 ~SlC~wg~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~~~~~~ 247 (412)
T PLN02692 206 FSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISRADMN 247 (412)
T ss_pred EEecCCCcCChhhhhhhcCCccccccccccchHhHHHHHHHH
Confidence 885543221 2345567 799999999887766443
No 30
>PLN02808 alpha-galactosidase
Probab=97.52 E-value=0.0034 Score=70.47 Aligned_cols=178 Identities=19% Similarity=0.296 Sum_probs=113.3
Q ss_pred cCCCCCCccccccccccccC-C---CCHHHHHHHHHhhhcCCCC---ceEEEeeccccC----CCcceeECCCCCCC-hH
Q 003671 355 TGMPSMPPLFSIAYHQCRWN-Y---RDEEDVEQVDSKFDEHDIP---YDVLWLDIEHTD----GKKYFTWDRLSFPH-PE 422 (804)
Q Consensus 355 tG~p~lpP~walG~~q~rw~-Y---~~~~~v~~v~~~~~~~~iP---~D~iwlDi~~~~----~~~~ft~d~~~FP~-p~ 422 (804)
.|..+.|| +|+ +.|+ | -+++.++++++.|.+.|+. ++.|.+|..|.. ..+.+..|+++||+ .+
T Consensus 26 ngla~tPp---mGW--nsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G~~~~d~~rFP~G~~ 100 (386)
T PLN02808 26 NGLGLTPQ---MGW--NSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKASTFPSGIK 100 (386)
T ss_pred CcccCCCc---ceE--EchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCCCCEeeChhhcCccHH
Confidence 45667777 565 3343 2 4789999999988665554 899999988854 45679999999998 89
Q ss_pred HHHHHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccc
Q 003671 423 EMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENY 502 (804)
Q Consensus 423 ~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~ 502 (804)
.+.+.+|++|.|+-++.|++...-..+ -||. ..+...-.+ .|
T Consensus 101 ~lad~iH~~GlkfGiy~~~G~~tC~~~-------------------------~pGs-----------~~~e~~DA~--~f 142 (386)
T PLN02808 101 ALADYVHSKGLKLGIYSDAGTLTCSKT-------------------------MPGS-----------LGHEEQDAK--TF 142 (386)
T ss_pred HHHHHHHHCCCceEEEecCCccccCCC-------------------------CCcc-----------hHHHHHHHH--HH
Confidence 999999999999999998864322110 1342 333322221 12
Q ss_pred cCCCCcceEeecCCCCCCCCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCCCCCCeEEeccccC--CC
Q 003671 503 VGSTPSLYIWNDMNEPSVFNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENGKDRPFVLARAFFA--GS 580 (804)
Q Consensus 503 ~g~~~~~~~W~DmnEps~f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~~~RpfilsRS~f~--Gs 580 (804)
. ..++|+++.|-.-.. + .+.+..|.. ..++|.+. .||+++|=+.+. ..
T Consensus 143 A-~WGvDylK~D~C~~~-----------------~---~~~~~~y~~-----m~~AL~~t----GRpi~~slc~wg~~~p 192 (386)
T PLN02808 143 A-SWGIDYLKYDNCENT-----------------G---TSPQERYPK-----MSKALLNS----GRPIFFSLCEWGQEDP 192 (386)
T ss_pred H-HhCCCEEeecCcCCC-----------------C---ccHHHHHHH-----HHHHHHHh----CCCeEEEecCCCCCCH
Confidence 1 357889998854210 0 011233432 23455443 599998854332 11
Q ss_pred ----Ccccccc--cCCCcCchHHHHHHHHHH
Q 003671 581 ----QRYGAVW--TGDNTAEWEQLRVSVPMI 605 (804)
Q Consensus 581 ----qry~~~W--tGDn~s~W~~L~~si~~~ 605 (804)
+.++..| +||...+|+.+...+...
T Consensus 193 ~~w~~~~~n~WR~s~Di~d~W~~v~~~~~~~ 223 (386)
T PLN02808 193 ATWAGDIGNSWRTTGDIQDNWDSMTSRADQN 223 (386)
T ss_pred HHHHHhhcCcccccCCcccchhhHHHHHHhh
Confidence 2344566 699999999887776543
No 31
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=92.56 E-value=0.81 Score=50.38 Aligned_cols=115 Identities=15% Similarity=0.251 Sum_probs=76.2
Q ss_pred cccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeEC-----------CCCC-CChHHHHHHHHHcCCeEEEE
Q 003671 371 CRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWD-----------RLSF-PHPEEMQRKLATKGRHMVTI 438 (804)
Q Consensus 371 ~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d-----------~~~F-P~p~~m~~~L~~~g~k~v~i 438 (804)
+.|.-.+.+.+.++++.+++.++ .++.+|+--.+| ..+++ ...+ .|++++++.||++|+.++..
T Consensus 5 t~~~a~~~~~~~~~~~~i~~t~l--NavVIDvKdd~G--~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IAR 80 (316)
T PF13200_consen 5 TAYSAGSPERLDKLLDLIKRTEL--NAVVIDVKDDDG--NITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIAR 80 (316)
T ss_pred chhhcCCHHHHHHHHHHHHhcCC--ceEEEEEecCCc--eEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEE
Confidence 34445577778888988888877 678888753333 33332 1233 79999999999999987766
Q ss_pred ecCccccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcc
Q 003671 439 VDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFS 498 (804)
Q Consensus 439 idP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~ 498 (804)
|--+ + |+ ...+. ..++.+++.+|+.+... .| ..|+|-++++++++-.+..+
T Consensus 81 Iv~F-k-D~---~la~~-~pe~av~~~~G~~w~d~--~~-~~WvnP~~~evw~Y~i~IA~ 131 (316)
T PF13200_consen 81 IVVF-K-DP---VLAEA-HPEWAVKTKDGSVWRDN--EG-EAWVNPYSKEVWDYNIDIAK 131 (316)
T ss_pred EEEe-c-Ch---HHhhh-ChhhEEECCCCCcccCC--CC-CccCCCCCHHHHHHHHHHHH
Confidence 5322 1 21 11122 34577788888764321 23 57999999999999877544
No 32
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=91.71 E-value=0.53 Score=45.23 Aligned_cols=84 Identities=18% Similarity=0.181 Sum_probs=50.8
Q ss_pred HHHHHHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCCCCCeeee--ecCCCcccccCCCHhHHHHHHhhccc
Q 003671 422 EEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDATKRDYDGW--CWPGSSSYLDMLNPEIRTWWGTKFSY 499 (804)
Q Consensus 422 ~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~--~WpG~~~~~Dftnp~a~~ww~~~~~~ 499 (804)
.+|++..|+.|+|++..++... +. ..++ .--++++++++|++..+. -.|| -...-+ |..-++.-..+++.
T Consensus 47 ge~v~a~h~~Girv~ay~~~~~--d~--~~~~--~HPeW~~~~~~G~~~~~~~~~~~~-~~~~c~-ns~Y~e~~~~~i~E 118 (132)
T PF14871_consen 47 GEQVEACHERGIRVPAYFDFSW--DE--DAAE--RHPEWFVRDADGRPMRGERFGYPG-WYTCCL-NSPYREFLLEQIRE 118 (132)
T ss_pred HHHHHHHHHCCCEEEEEEeeec--Ch--HHHH--hCCceeeECCCCCCcCCCCcCCCC-ceecCC-CccHHHHHHHHHHH
Confidence 7999999999999999999873 22 2333 336899999999852111 1122 111222 22333444444431
Q ss_pred ccccCCCCcceEeecC
Q 003671 500 ENYVGSTPSLYIWNDM 515 (804)
Q Consensus 500 ~~~~g~~~~~~~W~Dm 515 (804)
.....+.||+|.||
T Consensus 119 --i~~~y~~DGiF~D~ 132 (132)
T PF14871_consen 119 --ILDRYDVDGIFFDI 132 (132)
T ss_pred --HHHcCCCCEEEecC
Confidence 12234689999997
No 33
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=91.21 E-value=0.56 Score=56.42 Aligned_cols=102 Identities=16% Similarity=0.245 Sum_probs=71.1
Q ss_pred eEEEEEEecCCHHHHHHHHHHhcCCC----------CCCcc-ccccccccccC--C--CCHHHHHHHHHhhhcCCCCceE
Q 003671 333 IVDTFFFVGPGPKDVVRQYTSVTGMP----------SMPPL-FSIAYHQCRWN--Y--RDEEDVEQVDSKFDEHDIPYDV 397 (804)
Q Consensus 333 ~lD~y~f~G~tp~~vi~~Y~~ltG~p----------~lpP~-walG~~q~rw~--Y--~~~~~v~~v~~~~~~~~iP~D~ 397 (804)
.-=+|+-.|.+|-++++++.+.+=+- .+|.. =-||| |.|+ | -+++.|++.++.+.+.++|..-
T Consensus 161 ~~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GW--CTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~ 238 (758)
T PLN02355 161 SHLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGW--CTWDAFYTNVTAEGVKQGLESLEKGGVTPKF 238 (758)
T ss_pred ceEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeE--EehhHhhccCCHHHHHHHHHHHHhCCCCccE
Confidence 34456678999999999998753222 34432 22555 9996 3 2678899999999999999999
Q ss_pred EEeeccccCCC---c-----------------ceeECCCCCC--------------ChHHHHHHHHH-cCCeEEE
Q 003671 398 LWLDIEHTDGK---K-----------------YFTWDRLSFP--------------HPEEMQRKLAT-KGRHMVT 437 (804)
Q Consensus 398 iwlDi~~~~~~---~-----------------~ft~d~~~FP--------------~p~~m~~~L~~-~g~k~v~ 437 (804)
+-+|..|.+-. + .|+=|+ +|| ..+..++.+++ .|+|.|-
T Consensus 239 viIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~f~~n~-KF~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~ 312 (758)
T PLN02355 239 VIIDDGWQSVGMDPTGIECLADNSANFANRLTHIKENH-KFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVY 312 (758)
T ss_pred EEEeccccccccccccccccccccchhhhhhccccccc-cccccccccccccCCCCcHHHHHHHHHhhcCCcEEE
Confidence 99998886421 0 122233 566 56788888886 6888763
No 34
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=86.86 E-value=2.1 Score=51.69 Aligned_cols=274 Identities=15% Similarity=0.184 Sum_probs=142.8
Q ss_pred EEEEecCCHHHHHHHHHHhcCC---------CCCCccccccccccccC--CC--CHHHHHHHHHhhhcCCCCceEEEeec
Q 003671 336 TFFFVGPGPKDVVRQYTSVTGM---------PSMPPLFSIAYHQCRWN--YR--DEEDVEQVDSKFDEHDIPYDVLWLDI 402 (804)
Q Consensus 336 ~y~f~G~tp~~vi~~Y~~ltG~---------p~lpP~walG~~q~rw~--Y~--~~~~v~~v~~~~~~~~iP~D~iwlDi 402 (804)
+|+-.|.+|-++++++.+.+-+ -.-.|.|-=|+-.|.|+ |. +++.|++.++.+.+.++|...+-+|.
T Consensus 160 v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDD 239 (775)
T PLN02219 160 VYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDD 239 (775)
T ss_pred EEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEcc
Confidence 4556799999999999886521 11245554344459996 33 57889999999999999999999998
Q ss_pred cccCCCc--------------------ceeECCC--------CCC-ChHHHHHHHHH-cCCeEEE-Ee-----cCccccC
Q 003671 403 EHTDGKK--------------------YFTWDRL--------SFP-HPEEMQRKLAT-KGRHMVT-IV-----DPHIKRD 446 (804)
Q Consensus 403 ~~~~~~~--------------------~ft~d~~--------~FP-~p~~m~~~L~~-~g~k~v~-ii-----dP~i~~~ 446 (804)
.|++-.. .|.=|++ .|| ..+.+++++++ .|+|.|- |- +=+|+.+
T Consensus 240 GwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~ 319 (775)
T PLN02219 240 GWQQIENKEKDENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPA 319 (775)
T ss_pred CccccccccccccccccccchhhhhhccccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCC
Confidence 8864211 1211211 355 45888999986 6888663 31 1122222
Q ss_pred C-ChhhhHHHHHcCceEEcCC--CC-Ceee--eecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCCCC
Q 003671 447 D-SYWLHNEATEKGYYVKDAT--KR-DYDG--WCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEPSV 520 (804)
Q Consensus 447 ~-~y~~~~~~~~~~~~vk~~~--g~-~~~g--~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEps~ 520 (804)
. .-+.|+..+. |-+..++ ++ +-.. ..-.+....+| -+++..+|.+.+++ ..+.++|+++.|.--- .
T Consensus 320 ~~~~~~Y~~~~~--~p~~spg~~~~~pd~a~d~l~~~G~glV~--P~~~~~FYd~~hsy---Las~GVDgVKVDvQ~~-L 391 (775)
T PLN02219 320 AAGMEHYDSALA--YPVQSPGVLGNQPDIVMDSLSVHGLGLVN--PKKVFNFYNELHAY---LASCGVDGVKVDVQNI-I 391 (775)
T ss_pred Cccccccccccc--ccccCCCccccCcchhhhhhhhCCccccC--HHHHHHHHHHHHHH---HHHcCCCEEEEchhhh-H
Confidence 1 0011211110 1111110 00 0000 00001122332 14578899988764 3456789999884310 0
Q ss_pred CCCCCccCCCCCccCCcccchhhchhhHHHHHHHhHHHHHHhcCC---------------CCCCeEEecc---ccCC---
Q 003671 521 FNGPEVTMPRDALHLDRVEHRELHNAYGYYFHMATSDGLLKRENG---------------KDRPFVLARA---FFAG--- 579 (804)
Q Consensus 521 f~g~e~t~~~d~~h~~g~~~~~~HN~Yg~~~~~at~~~l~~~~~~---------------~~RpfilsRS---~f~G--- 579 (804)
.++.. .++|. .+++..|-.....+ +.+..++ ..++-.+.|+ +|+.
T Consensus 392 -----e~L~~---~~ggr--v~la~~y~~ALe~S----~~r~F~~ng~I~CMsh~~d~i~~~k~sav~R~SDDF~P~dP~ 457 (775)
T PLN02219 392 -----ETLGA---GHGGR--VSLTRSYQQALEAS----IARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPA 457 (775)
T ss_pred -----HHhhc---cCCcH--HHHHHHHHHHHHHH----HHHhCCCCCeEEecccCchhhhcccccceeecccccccCCCc
Confidence 01111 12221 23333332111111 1111111 0123344554 2322
Q ss_pred -------CCcccccccCCC-cCchHHHHHHHHHH----HHHhccCCCccccccCCCCCCCCHHHHHH
Q 003671 580 -------SQRYGAVWTGDN-TAEWEQLRVSVPMI----LTLGLTGMSFSGADVGGFFGNPDTELLVR 634 (804)
Q Consensus 580 -------sqry~~~WtGDn-~s~W~~L~~si~~~----L~~~l~G~p~~g~DigGF~g~p~~EL~~R 634 (804)
+-.|-+.|+|-- .-+||.++++=+.. .+=+++|=|..-+|-.| +.+-||+.+
T Consensus 458 sh~~Hi~~nAyNSLllg~~v~PDWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD~PG---~Hdf~LLk~ 521 (775)
T PLN02219 458 SHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPG---NHNFDLLRK 521 (775)
T ss_pred cCcchhhhhhhhhHHhccccccCchhceecCccHHHHHHHHhhcCCcEEEecCCC---CccHHHHHH
Confidence 124566788865 48898766553333 22378999999999977 456666643
No 35
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=86.07 E-value=4.7 Score=47.92 Aligned_cols=99 Identities=14% Similarity=0.138 Sum_probs=58.3
Q ss_pred eeECCCCCCC---hHHHHHHHHHcCCeEEEEecC-ccccCCChhhhHHHHH------cCceEEcCCCCCeee--------
Q 003671 411 FTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHNEATE------KGYYVKDATKRDYDG-------- 472 (804)
Q Consensus 411 ft~d~~~FP~---p~~m~~~L~~~g~k~v~iidP-~i~~~~~y~~~~~~~~------~~~~vk~~~g~~~~g-------- 472 (804)
|..|+ +|.+ .++|++++|++|+|+|+=+-+ |+..+. +.|+++.+ .++|+....+..+.+
T Consensus 66 ~~vd~-~~Gt~~df~~Lv~~ah~~Gi~vilD~V~NH~s~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (539)
T TIGR02456 66 RAILP-EFGTIDDFKDFVDEAHARGMRVIIDLVLNHTSDQH--PWFQEARSNPDGPYRDFYVWSDTDEKYKDTRIIFVDT 142 (539)
T ss_pred cccCh-hhCCHHHHHHHHHHHHHCCCEEEEEeccCcCCCCC--HHHHHHhhCCCCCCCceEEecCCCccccccccccccc
Confidence 34444 3544 468899999999999885444 554332 55666543 367765433332221
Q ss_pred --eecC---C-----------CcccccCCCHhHHHHHHhhcccccccCCCCcceEeecC
Q 003671 473 --WCWP---G-----------SSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 473 --~~Wp---G-----------~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
..|. + ...-+|+.||++|+...+.++.. .. .++|||=+|+
T Consensus 143 ~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~vr~~l~~~~~~w--~~-~GvDGfRlDa 198 (539)
T TIGR02456 143 EKSNWTFDPVAKQYYWHRFFSHQPDLNYDNPAVHDAVHDVMRFW--LD-LGVDGFRLDA 198 (539)
T ss_pred CCCCccccCCcCeeEEecccCCCCccCCCCHHHHHHHHHHHHHH--HH-cCCCEEEEec
Confidence 1121 1 11247788999998877665432 12 3578888886
No 36
>PRK10785 maltodextrin glucosidase; Provisional
Probab=84.52 E-value=6.9 Score=47.16 Aligned_cols=130 Identities=13% Similarity=0.077 Sum_probs=75.0
Q ss_pred CHHHHHHHHHhhhcCCCCceEEEeeccc--cCCCc-----ceeECCCCCCC---hHHHHHHHHHcCCeEEEEecC-cccc
Q 003671 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEH--TDGKK-----YFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIKR 445 (804)
Q Consensus 377 ~~~~v~~v~~~~~~~~iP~D~iwlDi~~--~~~~~-----~ft~d~~~FP~---p~~m~~~L~~~g~k~v~iidP-~i~~ 445 (804)
+-+-|.+-+.-+++.|| ++|||--=+ ....+ ++..|+ +|.+ .++|++++|++|+|+|+=+-+ |...
T Consensus 177 Dl~GI~~kLdYL~~LGv--~~I~L~Pif~s~s~hgYd~~Dy~~iDp-~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~~ 253 (598)
T PRK10785 177 DLDGISEKLPYLKKLGV--TALYLNPIFTAPSVHKYDTEDYRHVDP-QLGGDAALLRLRHATQQRGMRLVLDGVFNHTGD 253 (598)
T ss_pred CHHHHHHHHHHHHHcCC--CEEEeCCcccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCcCCC
Confidence 44445555555566555 899987322 11122 344554 4554 578999999999999885444 5544
Q ss_pred CCChhhhHHHH-------------HcCceEEcCCCCCeeeeecCCCcccc--cCCCHhHHHHHHh----hcccccccCC-
Q 003671 446 DDSYWLHNEAT-------------EKGYYVKDATKRDYDGWCWPGSSSYL--DMLNPEIRTWWGT----KFSYENYVGS- 505 (804)
Q Consensus 446 ~~~y~~~~~~~-------------~~~~~vk~~~g~~~~g~~WpG~~~~~--Dftnp~a~~ww~~----~~~~~~~~g~- 505 (804)
+. +.|++.. ..++|..+.+|. + .+|-|....| |+.||+++++..+ .+++ +...
T Consensus 254 ~~--~~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~-~--~~w~g~~~lPdLN~~np~v~~~l~~~~~~v~~~--Wl~~~ 326 (598)
T PRK10785 254 SH--PWFDRHNRGTGGACHHPDSPWRDWYSFSDDGR-A--LDWLGYASLPKLDFQSEEVVNEIYRGEDSIVRH--WLKAP 326 (598)
T ss_pred CC--HHHHHhhccccccccCCCCCcceeeEECCCCC-c--CCcCCCCcCccccCCCHHHHHHHHhhhhHHHHH--hhcCC
Confidence 33 3444332 124555554442 2 3576765555 4689999988764 3331 1221
Q ss_pred CCcceEeecCC
Q 003671 506 TPSLYIWNDMN 516 (804)
Q Consensus 506 ~~~~~~W~Dmn 516 (804)
.++|||=+|.-
T Consensus 327 ~giDG~RlDva 337 (598)
T PRK10785 327 YNIDGWRLDVV 337 (598)
T ss_pred CCCcEEEEecH
Confidence 36888888865
No 37
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=83.49 E-value=7 Score=46.52 Aligned_cols=132 Identities=16% Similarity=0.231 Sum_probs=69.1
Q ss_pred CHHHHHHHHHhhhcCCCCceEEEeeccccC-----CC---cceeECCCCCCC---hHHHHHHHHHcCCeEEEEecC-ccc
Q 003671 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEHTD-----GK---KYFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIK 444 (804)
Q Consensus 377 ~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~-----~~---~~ft~d~~~FP~---p~~m~~~L~~~g~k~v~iidP-~i~ 444 (804)
+-..+.+-++.+++.|| ++|||-.-+.. ++ .++..|+. |.+ .++|++.+|++|+|+++=+-| |..
T Consensus 25 ~~~gi~~~l~yl~~lG~--~~i~l~Pi~~~~~~~~gY~~~d~~~id~~-~Gt~~~~~~lv~~ah~~gi~vilD~v~NH~~ 101 (543)
T TIGR02403 25 DLRGIIEKLDYLKKLGV--DYIWLNPFYVSPQKDNGYDVSDYYAINPL-FGTMADFEELVSEAKKRNIKIMLDMVFNHTS 101 (543)
T ss_pred CHHHHHHhHHHHHHcCC--CEEEECCcccCCCCCCCCCccccCccCcc-cCCHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 33444444455555444 77777532221 11 12445553 554 568899999999999885554 554
Q ss_pred cCCChhhhHHHHH-----cCceEEc-CCCCC-------eeeeecCCC--------------cccccCCCHhHHHHHHhhc
Q 003671 445 RDDSYWLHNEATE-----KGYYVKD-ATKRD-------YDGWCWPGS--------------SSYLDMLNPEIRTWWGTKF 497 (804)
Q Consensus 445 ~~~~y~~~~~~~~-----~~~~vk~-~~g~~-------~~g~~WpG~--------------~~~~Dftnp~a~~ww~~~~ 497 (804)
.+ .+.++++.+ +++|+-. ..|.. +.+..|.+. ..=+|+.||++++.-.+.+
T Consensus 102 ~~--~~~f~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~v~~~i~~~~ 179 (543)
T TIGR02403 102 TE--HEWFKKALAGDSPYRDFYIWRDPKGKPPTNWQSKFGGSAWEYFGDTGQYYLHLFDKTQADLNWENPEVREELKDVV 179 (543)
T ss_pred cc--hHHHHHhhcCCCcccCceEecCCCCCCCCcccccCCCcCccccCCCCceEEeccCCcCCccCCCCHHHHHHHHHHH
Confidence 33 244555542 3555432 22221 112223321 1236788999988666554
Q ss_pred ccccccCCCCcceEeecCC
Q 003671 498 SYENYVGSTPSLYIWNDMN 516 (804)
Q Consensus 498 ~~~~~~g~~~~~~~W~Dmn 516 (804)
++.. . .++|||=+|+-
T Consensus 180 ~~W~--~-~giDGfRlDa~ 195 (543)
T TIGR02403 180 NFWR--D-KGVDGFRLDVI 195 (543)
T ss_pred HHHH--H-cCCCEEEEeee
Confidence 4221 1 24666666643
No 38
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=82.42 E-value=7.5 Score=42.87 Aligned_cols=132 Identities=11% Similarity=0.116 Sum_probs=75.6
Q ss_pred CHHHHHHHHHhhhcCCCCceEEEeecccc----CCCcceeEC------CC---CCCChHHHHHHHHHcCCeEEEEecCcc
Q 003671 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEHT----DGKKYFTWD------RL---SFPHPEEMQRKLATKGRHMVTIVDPHI 443 (804)
Q Consensus 377 ~~~~v~~v~~~~~~~~iP~D~iwlDi~~~----~~~~~ft~d------~~---~FP~p~~m~~~L~~~g~k~v~iidP~i 443 (804)
+.+++.++++.+++.+ +-+|+++.-.. .......|. +. .|--.+.||++-|++|+++-.|+...+
T Consensus 17 ~~~~~~~~l~~l~~~~--~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~ 94 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAG--FNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGF 94 (311)
T ss_pred CHHHHHHHHHHHHHcC--CCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeec
Confidence 6788999999999999 57777775421 111122221 11 122247899999999999999994444
Q ss_pred ccCCChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeec
Q 003671 444 KRDDSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWND 514 (804)
Q Consensus 444 ~~~~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~D 514 (804)
.....-...+.. ...+.++..|....-..=.|...|+|-.+|++|++-.+.+... .....+||+=+|
T Consensus 95 ~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Ei--v~~YdvDGIhlD 161 (311)
T PF02638_consen 95 NAPDVSHILKKH--PEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEI--VKNYDVDGIHLD 161 (311)
T ss_pred CCCchhhhhhcC--chhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHH--HhcCCCCeEEec
Confidence 322111111111 1123333333221100002556799999999999998876531 112346777666
No 39
>PLN00196 alpha-amylase; Provisional
Probab=77.89 E-value=18 Score=41.83 Aligned_cols=60 Identities=10% Similarity=0.179 Sum_probs=41.0
Q ss_pred HHHHHHHHHhhhcCCCCceEEEeeccc--cCCCc-----ceeECCCCCCC---hHHHHHHHHHcCCeEEEEe
Q 003671 378 EEDVEQVDSKFDEHDIPYDVLWLDIEH--TDGKK-----YFTWDRLSFPH---PEEMQRKLATKGRHMVTIV 439 (804)
Q Consensus 378 ~~~v~~v~~~~~~~~iP~D~iwlDi~~--~~~~~-----~ft~d~~~FP~---p~~m~~~L~~~g~k~v~ii 439 (804)
-+.+.+-+..+++.|| ++|||---. ....+ ++..|+.+|-+ .++|++.+|++|+|+++=+
T Consensus 43 ~~~i~~kldyL~~LGv--taIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDv 112 (428)
T PLN00196 43 YNFLMGKVDDIAAAGI--THVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADI 112 (428)
T ss_pred HHHHHHHHHHHHHcCC--CEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3456666677777776 899997322 12222 35566667875 5688999999999998743
No 40
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=74.78 E-value=9.9 Score=46.10 Aligned_cols=102 Identities=15% Similarity=0.201 Sum_probs=68.7
Q ss_pred EEEEecCCHHHHHHHHHHhcCCC---------CCCccccccccccccC--CC--CHHHHHHHHHhhhcCCCCceEEEeec
Q 003671 336 TFFFVGPGPKDVVRQYTSVTGMP---------SMPPLFSIAYHQCRWN--YR--DEEDVEQVDSKFDEHDIPYDVLWLDI 402 (804)
Q Consensus 336 ~y~f~G~tp~~vi~~Y~~ltG~p---------~lpP~walG~~q~rw~--Y~--~~~~v~~v~~~~~~~~iP~D~iwlDi 402 (804)
+|+=.|.+|-+++++=.+..-+. .-+|.|-=|+-.|.|+ |. +++.|++.++.+.+.++|..-+-+|.
T Consensus 163 ~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vIIDD 242 (750)
T PLN02684 163 LFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDD 242 (750)
T ss_pred EEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEec
Confidence 46778999999988864332111 1244444344449996 33 57889999999999999999999998
Q ss_pred cccCCCc-----------------ceeEC-CCCCC-------ChHHHHHHHH-HcCCeEEE
Q 003671 403 EHTDGKK-----------------YFTWD-RLSFP-------HPEEMQRKLA-TKGRHMVT 437 (804)
Q Consensus 403 ~~~~~~~-----------------~ft~d-~~~FP-------~p~~m~~~L~-~~g~k~v~ 437 (804)
.|.+-.. -..+. .++|| ..+..++.|+ +.|+|.|-
T Consensus 243 GwQs~~~d~~~~~~~~~~~q~~~rL~~f~en~KF~~~~~p~~Glk~~V~~iK~~~~vk~V~ 303 (750)
T PLN02684 243 GWQSVGGDPTVEAGDEKKEQPLLRLTGIKENEKFKKKDDPNVGIKNIVNIAKEKHGLKYVY 303 (750)
T ss_pred ccccccccccccccccccchhhhhhccCccccccccccCCCccHHHHHHHHHhhcCCcEEE
Confidence 8864221 11121 24565 5678899997 56888663
No 41
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=71.55 E-value=20 Score=42.82 Aligned_cols=73 Identities=18% Similarity=0.236 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhhcCCCCceEEEeeccccC-----CC---cceeECCCCCC---ChHHHHHHHHHcCCeEEEEecC-cccc
Q 003671 378 EEDVEQVDSKFDEHDIPYDVLWLDIEHTD-----GK---KYFTWDRLSFP---HPEEMQRKLATKGRHMVTIVDP-HIKR 445 (804)
Q Consensus 378 ~~~v~~v~~~~~~~~iP~D~iwlDi~~~~-----~~---~~ft~d~~~FP---~p~~m~~~L~~~g~k~v~iidP-~i~~ 445 (804)
-..+.+-++.+++.|| ++|||-.=+.. |+ .++..|+ +|. +.++|++.+|++|+|+++=+-+ |...
T Consensus 32 l~gi~~~ldyl~~lGv--~~i~l~P~~~~~~~~~gY~~~d~~~id~-~~Gt~~d~~~lv~~~h~~gi~vilD~V~NH~s~ 108 (551)
T PRK10933 32 LRGVTQRLDYLQKLGV--DAIWLTPFYVSPQVDNGYDVANYTAIDP-TYGTLDDFDELVAQAKSRGIRIILDMVFNHTST 108 (551)
T ss_pred HHHHHHhhHHHHhCCC--CEEEECCCCCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCCccC
Confidence 3344444445555444 77777422110 11 1233343 344 3578999999999999885544 4443
Q ss_pred CCChhhhHHH
Q 003671 446 DDSYWLHNEA 455 (804)
Q Consensus 446 ~~~y~~~~~~ 455 (804)
+ .+.|+++
T Consensus 109 ~--~~wf~~~ 116 (551)
T PRK10933 109 Q--HAWFREA 116 (551)
T ss_pred c--hhHHHhh
Confidence 2 2445554
No 42
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type. Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases.
Probab=68.27 E-value=9.4 Score=42.14 Aligned_cols=101 Identities=13% Similarity=0.230 Sum_probs=59.8
Q ss_pred CceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCccccCCChhh-hHHHH---HcCceEEcCCCCC
Q 003671 394 PYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWL-HNEAT---EKGYYVKDATKRD 469 (804)
Q Consensus 394 P~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~y~~-~~~~~---~~~~~vk~~~g~~ 469 (804)
++|.+.+|.++... +...|. ++-++.||+.|.+++..+.=+-. .+|.. |++.. ...++ |..
T Consensus 64 ~~d~vVID~~~~g~------~~~~fs--~~~i~~Lk~~g~~viaYlSvGe~--E~~R~y~~~~~~~~~~~~l-----~~~ 128 (315)
T TIGR01370 64 PFELVVIDYSKDGT------EDGTYS--PEEIVRAAAAGRWPIAYLSIGAA--EDYRFYWQKGWKVNAPAWL-----GNE 128 (315)
T ss_pred CCCEEEEccccccC------cccCCC--HHHHHHHHhCCcEEEEEEEchhc--cccchhhhhhhhcCCHHHh-----CCC
Confidence 58888888765311 111232 45678899999999988774432 22333 23211 11222 222
Q ss_pred eeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecC
Q 003671 470 YDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 470 ~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
.. -|||+ .++|+.+|+-++...+.++...- .|++|+..|.
T Consensus 129 n~--~W~g~-~~vd~~~~~W~~il~~rl~~l~~---kGfDGvfLD~ 168 (315)
T TIGR01370 129 DP--DWPGN-YDVKYWDPEWKAIAFSYLDRVIA---QGFDGVYLDL 168 (315)
T ss_pred CC--CCCCc-eeEecccHHHHHHHHHHHHHHHH---cCCCeEeecc
Confidence 22 39995 89999999988878776543222 3578888774
No 43
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=68.21 E-value=17 Score=43.93 Aligned_cols=91 Identities=21% Similarity=0.221 Sum_probs=50.5
Q ss_pred CCCC---hHHHHHHHHHcCCeEEEEecC-ccccCCChhhhHHHHHcC-ceEEcCCCCCeeeeecCCCcccccCCCHhHHH
Q 003671 417 SFPH---PEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHNEATEKG-YYVKDATKRDYDGWCWPGSSSYLDMLNPEIRT 491 (804)
Q Consensus 417 ~FP~---p~~m~~~L~~~g~k~v~iidP-~i~~~~~y~~~~~~~~~~-~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ 491 (804)
+|.. .++||+.+|++|+++|+-+-+ |...+... +..-.... |+..+.... ....| | ..-+|+.||++|+
T Consensus 201 ~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~--~~~~~~~~~y~~~~~~~~--~~~~w-~-~~~~~~~~~~Vr~ 274 (613)
T TIGR01515 201 RFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHG--LAEFDGTPLYEHKDPRDG--EHWDW-G-TLIFDYGRPEVRN 274 (613)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccch--hhccCCCcceeccCCccC--cCCCC-C-CceecCCCHHHHH
Confidence 5764 578999999999999986654 55443211 11000001 222221110 01123 2 3467999999999
Q ss_pred HHHhhcccccccCCCCcceEeecC
Q 003671 492 WWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 492 ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
+..+.+++. ....++|||=+|+
T Consensus 275 ~l~~~~~~W--~~ey~iDG~R~D~ 296 (613)
T TIGR01515 275 FLVANALYW--AEFYHIDGLRVDA 296 (613)
T ss_pred HHHHHHHHH--HHHhCCcEEEEcC
Confidence 877765432 1123567777775
No 44
>PRK03705 glycogen debranching enzyme; Provisional
Probab=67.72 E-value=8.2 Score=46.99 Aligned_cols=91 Identities=16% Similarity=0.229 Sum_probs=53.4
Q ss_pred ChHHHHHHHHHcCCeEEEEec-CccccC---CChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHh
Q 003671 420 HPEEMQRKLATKGRHMVTIVD-PHIKRD---DSYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGT 495 (804)
Q Consensus 420 ~p~~m~~~L~~~g~k~v~iid-P~i~~~---~~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~ 495 (804)
+.++||+.+|++|+++|+=+- -|.... ..+..++......||..+.+|. +. .|-|-..-+++.||.++++..+
T Consensus 243 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~g~-~~--~~~g~g~~ln~~~p~Vr~~iid 319 (658)
T PRK03705 243 EFRDAVKALHKAGIEVILDVVFNHSAELDLDGPTLSLRGIDNRSYYWIREDGD-YH--NWTGCGNTLNLSHPAVVDWAID 319 (658)
T ss_pred HHHHHHHHHHHCCCEEEEEEcccCccCcCCCCcchhcccCCCccceEECCCCC-cC--CCCCccCcccCCCHHHHHHHHH
Confidence 368999999999999988443 344321 1111121112245565555553 22 3444444678889999987777
Q ss_pred hcccccccCCCCcceEeecC
Q 003671 496 KFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 496 ~~~~~~~~g~~~~~~~W~Dm 515 (804)
.+++. ....++|||=.|.
T Consensus 320 ~l~~W--~~e~gVDGFRfD~ 337 (658)
T PRK03705 320 CLRYW--VETCHVDGFRFDL 337 (658)
T ss_pred HHHHH--HHHhCCCEEEEEc
Confidence 65532 1123577887773
No 45
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=67.52 E-value=13 Score=45.27 Aligned_cols=69 Identities=17% Similarity=0.374 Sum_probs=50.9
Q ss_pred EEEEecCCHHHHHHHHHHh----cCC------CCCCc-cccccccccccC--CC--CHHHHHHHHHhhhcCCCCceEEEe
Q 003671 336 TFFFVGPGPKDVVRQYTSV----TGM------PSMPP-LFSIAYHQCRWN--YR--DEEDVEQVDSKFDEHDIPYDVLWL 400 (804)
Q Consensus 336 ~y~f~G~tp~~vi~~Y~~l----tG~------p~lpP-~walG~~q~rw~--Y~--~~~~v~~v~~~~~~~~iP~D~iwl 400 (804)
+|+=.|.+|-+++++=.+. +|. -.+|. +=-||| |.|+ |. +++.|++-++.+.+.|||..-+-+
T Consensus 174 ~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGW--CTWdAfy~~Vt~egI~~gl~~L~~~Gip~~~vII 251 (777)
T PLN02711 174 LYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGW--CTWDAFYLTVHPQGVWEGVKGLVDGGCPPGLVLI 251 (777)
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceE--EehhHhcccCCHHHHHHHHHHHHhCCCCccEEEE
Confidence 4666799999988875544 222 12442 334565 9996 43 578899999999999999999999
Q ss_pred eccccC
Q 003671 401 DIEHTD 406 (804)
Q Consensus 401 Di~~~~ 406 (804)
|..|++
T Consensus 252 DDGWQs 257 (777)
T PLN02711 252 DDGWQS 257 (777)
T ss_pred cCCccc
Confidence 988864
No 46
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=63.94 E-value=18 Score=38.60 Aligned_cols=126 Identities=17% Similarity=0.210 Sum_probs=69.5
Q ss_pred HHHHhhhcCCCCceEEEeecccc-----CCC---cceeECCCCCCC---hHHHHHHHHHcCCeEEEEecC-ccccCCChh
Q 003671 383 QVDSKFDEHDIPYDVLWLDIEHT-----DGK---KYFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIKRDDSYW 450 (804)
Q Consensus 383 ~v~~~~~~~~iP~D~iwlDi~~~-----~~~---~~ft~d~~~FP~---p~~m~~~L~~~g~k~v~iidP-~i~~~~~y~ 450 (804)
+-++.+++.|| ++|||--=+. .++ .++..|+ +|.+ .++|++.+|++|+|+|+=+-+ |...+. .
T Consensus 8 ~kLdyl~~lGv--~~I~l~Pi~~~~~~~~gY~~~d~~~vd~-~~Gt~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~~--~ 82 (316)
T PF00128_consen 8 DKLDYLKDLGV--NAIWLSPIFESPNGYHGYDPSDYYAVDP-RFGTMEDFKELVDAAHKRGIKVILDVVPNHTSDDH--P 82 (316)
T ss_dssp HTHHHHHHHTE--SEEEESS-EESSSSTTTTSESEEEEEST-TTBHHHHHHHHHHHHHHTTCEEEEEEETSEEETTS--H
T ss_pred HhhHHHHHcCC--Cceecccccccccccccccceeeecccc-ccchhhhhhhhhhccccccceEEEeeecccccccc--c
Confidence 33444555444 7888852111 111 1245565 5654 468899999999999986655 666544 3
Q ss_pred hhHHHHH------cCceEEcC-----C--------CCCeeeeecC----CC--cccccCCCHhHHHHHHhhcccccccCC
Q 003671 451 LHNEATE------KGYYVKDA-----T--------KRDYDGWCWP----GS--SSYLDMLNPEIRTWWGTKFSYENYVGS 505 (804)
Q Consensus 451 ~~~~~~~------~~~~vk~~-----~--------g~~~~g~~Wp----G~--~~~~Dftnp~a~~ww~~~~~~~~~~g~ 505 (804)
.+++..+ .++++-.. + +..+....|. .. ..-+|+.||++++...+.+++....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~i~~~~~~w~~~-- 160 (316)
T PF00128_consen 83 WFQDSLNYFDNPYSDYYYWRDGEGSPPGNWYSYFGGSNWEYDDWGDEYQFWSDLPDLNYENPEVREYIIDVLKFWIEE-- 160 (316)
T ss_dssp HHHHHHTHTTSTTGTTBEEESBTSTTSSTBBCSTTTSSEESCHHTHCHSSSTTSEEBETTSHHHHHHHHHHHHHHHHT--
T ss_pred cccccccccccccccceeecccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhcccccchhhc--
Confidence 3444332 34555221 1 1122221121 11 2346788999999888866532222
Q ss_pred CCcceEeecCC
Q 003671 506 TPSLYIWNDMN 516 (804)
Q Consensus 506 ~~~~~~W~Dmn 516 (804)
++|||=+|+-
T Consensus 161 -giDGfR~D~~ 170 (316)
T PF00128_consen 161 -GIDGFRLDAA 170 (316)
T ss_dssp -TESEEEETTG
T ss_pred -eEeEEEEccc
Confidence 3778877753
No 47
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=63.09 E-value=11 Score=42.47 Aligned_cols=127 Identities=17% Similarity=0.078 Sum_probs=69.9
Q ss_pred CHHHHHHHHHhhhcCCCCceEE-Eeec---cccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCccccCCChhhh
Q 003671 377 DEEDVEQVDSKFDEHDIPYDVL-WLDI---EHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLH 452 (804)
Q Consensus 377 ~~~~v~~v~~~~~~~~iP~D~i-wlDi---~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~ 452 (804)
+.+++++-++.+++.||-+-.| .+.+ +=..|+-+|+| ..++++.+++.|+|+++.+-.+-. +.+
T Consensus 8 ~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG~ydF~~-------lD~~l~~a~~~Gi~viL~~~~~~~-----P~W 75 (374)
T PF02449_consen 8 PEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEGQYDFSW-------LDRVLDLAAKHGIKVILGTPTAAP-----PAW 75 (374)
T ss_dssp -CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTTB---HH-------HHHHHHHHHCTT-EEEEEECTTTS------HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCCeeecHH-------HHHHHHHHHhccCeEEEEeccccc-----ccc
Confidence 3468888999999999977665 2333 33344434443 789999999999999886642211 222
Q ss_pred HHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccc--cccCCCCcceEeecCCCCCC
Q 003671 453 NEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYE--NYVGSTPSLYIWNDMNEPSV 520 (804)
Q Consensus 453 ~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~--~~~g~~~~~~~W~DmnEps~ 520 (804)
-.-.--+...++.+|... -.|.....++.+|..++.....++.. .+.+...+.++-+| ||+..
T Consensus 76 l~~~~Pe~~~~~~~g~~~----~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~-NE~~~ 140 (374)
T PF02449_consen 76 LYDKYPEILPVDADGRRR----GFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQID-NEPGY 140 (374)
T ss_dssp HHCCSGCCC-B-TTTSBE----ECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEC-CSTTC
T ss_pred hhhhcccccccCCCCCcC----ccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEec-cccCc
Confidence 111112455566677543 23445567889999988876654321 23332233344444 88765
No 48
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=56.36 E-value=14 Score=47.48 Aligned_cols=85 Identities=18% Similarity=0.171 Sum_probs=52.0
Q ss_pred hHHHHHHHHHcCCeEEEEec-CccccCCChhhhHHHHHcCceE-EcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcc
Q 003671 421 PEEMQRKLATKGRHMVTIVD-PHIKRDDSYWLHNEATEKGYYV-KDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFS 498 (804)
Q Consensus 421 p~~m~~~L~~~g~k~v~iid-P~i~~~~~y~~~~~~~~~~~~v-k~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~ 498 (804)
.++||+.||++|+++|+=+- -|..... .|+.. ..+||. .+.+|..... |.| .-++..||.+|++..+.+.
T Consensus 557 fK~LV~alH~~GI~VILDVVyNHt~~~~---~f~~~-~p~Yy~~~~~~G~~~~~--~~g--~~l~~e~~~vrk~iiDsl~ 628 (1111)
T TIGR02102 557 FKNLINEIHKRGMGVILDVVYNHTAKVY---IFEDL-EPNYYHFMDADGTPRTS--FGG--GRLGTTHEMSRRILVDSIK 628 (1111)
T ss_pred HHHHHHHHHHCCCEEEEecccccccccc---ccccc-CCCceEeeCCCCCcccc--cCC--CCCCcCCHHHHHHHHHHHH
Confidence 68999999999999988443 3443322 34332 234553 4556665433 333 3478889999887766554
Q ss_pred cccccCCCCcceEeecC
Q 003671 499 YENYVGSTPSLYIWNDM 515 (804)
Q Consensus 499 ~~~~~g~~~~~~~W~Dm 515 (804)
+. ....++|||=.|+
T Consensus 629 yW--v~ey~VDGFRfDl 643 (1111)
T TIGR02102 629 YL--VDEFKVDGFRFDM 643 (1111)
T ss_pred HH--HHhcCCcEEEEec
Confidence 31 2224577887884
No 49
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=56.29 E-value=14 Score=44.57 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=51.3
Q ss_pred ChHHHHHHHHHcCCeEEEEecC-ccccCCChhhhHHHHHcCceEE-cCCCCCeeeeecCCCcccccCCCHhHHHHHHhhc
Q 003671 420 HPEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHNEATEKGYYVK-DATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKF 497 (804)
Q Consensus 420 ~p~~m~~~L~~~g~k~v~iidP-~i~~~~~y~~~~~~~~~~~~vk-~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~ 497 (804)
+.++||+.+|++|+++|+=+-+ |...... ..|+... .+||.+ +.+|....+ .|-..-+++.||+++++..+.+
T Consensus 230 efk~lV~~~H~~Gi~VilDvV~NH~~~~~~-~~f~~~~-~~~~~~~~~~g~~~~~---~g~~~~~~~~~~~v~~~i~~~~ 304 (605)
T TIGR02104 230 ELKQMIQALHENGIRVIMDVVYNHTYSREE-SPFEKTV-PGYYYRYNEDGTLSNG---TGVGNDTASEREMMRKFIVDSV 304 (605)
T ss_pred HHHHHHHHHHHCCCEEEEEEEcCCccCCCC-CcccCCC-CCeeEEECCCCCccCC---CcccCCcccCCHHHHHHHHHHH
Confidence 3689999999999999885443 5432111 2333222 345543 444432211 2222346788999998877665
Q ss_pred ccccccCCCCcceEeecCC
Q 003671 498 SYENYVGSTPSLYIWNDMN 516 (804)
Q Consensus 498 ~~~~~~g~~~~~~~W~Dmn 516 (804)
++. ....++|||=.|.-
T Consensus 305 ~~W--~~e~~iDGfR~D~~ 321 (605)
T TIGR02104 305 LYW--VKEYNIDGFRFDLM 321 (605)
T ss_pred HHH--HHHcCCCEEEEech
Confidence 421 11235677777743
No 50
>cd06416 GH25_Lys1-like Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a several lysozyme genes upregulated upon infection by the Gram-negative bacterial pathogen Serratia marcescens. Lys-1 contains a glycosyl hydrolase family 25 (GH25) catalytic domain. This family also includes Lys-5 from Caenorhabditis elegans.
Probab=55.99 E-value=14 Score=37.58 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=47.6
Q ss_pred ccccccC--CCCHHHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCC-CChHHHHHHHHHcCCeEEEEecCc
Q 003671 368 YHQCRWN--YRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSF-PHPEEMQRKLATKGRHMVTIVDPH 442 (804)
Q Consensus 368 ~~q~rw~--Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~F-P~p~~m~~~L~~~g~k~v~iidP~ 442 (804)
||-++-. ...++++...++.++..++..+.+|+|+|...+. ++-+...- --.+++++.+++.|.+.++...+.
T Consensus 58 Yhf~~~~~~~~~~~Qa~~f~~~~~~~~~~~~~i~lDiE~~~~~--~~~~~~~~~~~~~~f~~~~~~~G~~~~iYt~~~ 133 (196)
T cd06416 58 YFFPCINCCGSAAGQVQTFLQYLKANGIKYGTVWIDIEQNPCQ--WSSDVASNCQFLQELVSAAKALGLKVGIYSSQY 133 (196)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhCCCceeEEEEEEecCCCC--CcCCHHHHHHHHHHHHHHHHHhCCeEEEEcCcc
Confidence 6766544 4456788888888887777778899999975221 11111100 013577788888899988887654
No 51
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.58 E-value=54 Score=37.61 Aligned_cols=118 Identities=9% Similarity=0.140 Sum_probs=70.3
Q ss_pred CCHHHHHHHHHhhhcCCCCce--EEEeeccccCCCcceeE--C------CC-CCCChHHHHHHHHHcCCeEEEEecCccc
Q 003671 376 RDEEDVEQVDSKFDEHDIPYD--VLWLDIEHTDGKKYFTW--D------RL-SFPHPEEMQRKLATKGRHMVTIVDPHIK 444 (804)
Q Consensus 376 ~~~~~v~~v~~~~~~~~iP~D--~iwlDi~~~~~~~~ft~--d------~~-~FP~p~~m~~~L~~~g~k~v~iidP~i~ 444 (804)
.+++++.+.++++++.|+--= .+|.+=+-.......-| + .. .|--.+.||++=|++|+++..|+.|+..
T Consensus 61 ~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~~~~~~~~~g~DpLa~~I~~AHkr~l~v~aWf~~~~~ 140 (418)
T COG1649 61 FQRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGLPGVLGVDPGYDPLAFVIAEAHKRGLEVHAWFNPYRM 140 (418)
T ss_pred ccHHHHHHHHHHHHHcCCceeEEEEecCccccccccccccccCcCcccCCCCCCChHHHHHHHHHhcCCeeeechhhccc
Confidence 467888888999988887432 23433221111111111 1 11 2323478999999999999999999886
Q ss_pred cCCChhhhHHHH-HcCceEEcCCCCCeeeeecCC--CcccccCCCHhHHHHHHhhcc
Q 003671 445 RDDSYWLHNEAT-EKGYYVKDATKRDYDGWCWPG--SSSYLDMLNPEIRTWWGTKFS 498 (804)
Q Consensus 445 ~~~~y~~~~~~~-~~~~~vk~~~g~~~~g~~WpG--~~~~~Dftnp~a~~ww~~~~~ 498 (804)
.... -.... .......+..|..+.-. +| .-.|+|=.+|++++|..+.+.
T Consensus 141 a~~~---s~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~ldPg~Pevq~~i~~lv~ 192 (418)
T COG1649 141 APPT---SPLTKRHPHWLTTKRPGWVYVRH--QGWGKRVWLDPGIPEVQDFITSLVV 192 (418)
T ss_pred CCCC---ChhHhhCCCCcccCCCCeEEEec--CCceeeeEeCCCChHHHHHHHHHHH
Confidence 4321 11121 12233333344433211 12 578999999999999998764
No 52
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=52.24 E-value=5.8 Score=48.39 Aligned_cols=164 Identities=4% Similarity=-0.258 Sum_probs=107.1
Q ss_pred HHHhHHHHHHhcCCCCCCeEEeccccCCCCcccccccCCCc-CchHHHHHHHHHHHHHhccCCCccccccCCCCCCCCHH
Q 003671 552 HMATSDGLLKRENGKDRPFVLARAFFAGSQRYGAVWTGDNT-AEWEQLRVSVPMILTLGLTGMSFSGADVGGFFGNPDTE 630 (804)
Q Consensus 552 ~~at~~~l~~~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~-s~W~~L~~si~~~L~~~l~G~p~~g~DigGF~g~p~~E 630 (804)
..+.+...+.+. ..++.+-++ +...+.++.+.+|.+++. +-|.+= .++.- ..+..+..++...+++|.-.....+
T Consensus 473 ~~~lyg~~~aia-t~~a~~~v~-~kr~~i~srsTf~g~g~y~~hwlgd-n~~~w-~~L~~sI~gml~fnl~Gip~Vg~Di 548 (805)
T KOG1065|consen 473 THNLYGYSEAIA-THQALVDVP-GKRSFILSRSTFVGSGRYAGHWLGD-NTARW-EDLQTSISGMLEFNLFGIPMVGSDI 548 (805)
T ss_pred hhhhHhHHHhhh-hhccceecc-ccccccccccceecccccceeeccc-cccee-hhccccchhhhcccccCCCccchhh
Confidence 344555555554 446666555 888899999999876665 555432 22222 5566666666888888876665566
Q ss_pred HHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCccccccccCCCCCCc
Q 003671 631 LLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMFLPYFYTLFREANTTGIPVVRPLWMEFPSDES 710 (804)
Q Consensus 631 L~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPY~Yt~~~~a~~~G~Pi~RPL~~~fP~D~~ 710 (804)
++ ++|...|..++|-.....-.++..+ ..+....|..+-.|++ +.+++-......+.++-+++.++||.-..
T Consensus 549 cg----f~~~~~eELc~RW~q~gaF~Pf~R~-hn~~~~~~qe~~~~~s---v~~a~r~~~~~ry~~lP~lytl~~~A~~s 620 (805)
T KOG1065|consen 549 CG----FLGPPTEELCLRWLQLGAFYPFSRN-HNSPGEPRQEPYTWSS---VAEAARNALTLRYTLLPYLYTLFYRAHVS 620 (805)
T ss_pred hc----CCCCCCHHHHHHHHHhccCCchhhc-cCCCCCcccChhhHHH---HHHHHHHhhhheeeehhhHHHhhhhhhhc
Confidence 65 8999999988886544333443333 1222334444556666 77888888888899999999999998766
Q ss_pred ccccCceeeecCceeEE
Q 003671 711 TFTNDEAFMVGNALLVQ 727 (804)
Q Consensus 711 ~~~~~~Qfm~G~~lLVa 727 (804)
--.+..+.|++--..-+
T Consensus 621 G~pV~RPlf~~fP~D~~ 637 (805)
T KOG1065|consen 621 GEPVARPLFFEFPTDPA 637 (805)
T ss_pred CCcceeeeeeecCCChh
Confidence 66666666665544333
No 53
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional
Probab=51.89 E-value=21 Score=46.74 Aligned_cols=92 Identities=12% Similarity=0.041 Sum_probs=51.8
Q ss_pred ChHHHHHHHHHcCCeEEEEecC-ccccCCChhhh--HHHHH-cCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHh
Q 003671 420 HPEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLH--NEATE-KGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGT 495 (804)
Q Consensus 420 ~p~~m~~~L~~~g~k~v~iidP-~i~~~~~y~~~--~~~~~-~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~ 495 (804)
+.++||+.+|++|+++|+=+-+ |...+..+... ..+.+ ..||-.+. +.+..-.+|-|-...+|+.+|.++++-.+
T Consensus 248 efk~lV~~~H~~GI~VILDvV~NHt~~~~~~~p~~~~~~~d~~~yy~~~~-~~~~~y~~~~G~gn~~n~~~p~v~~~i~d 326 (1221)
T PRK14510 248 EFAQAIKEAQSAGIAVILDVVFNHTGESNHYGPTLSAYGSDNSPYYRLEP-GNPKEYENWWGCGNLPNLERPFILRLPMD 326 (1221)
T ss_pred HHHHHHHHHHHCCCEEEEEEccccccCCCCCCCcccccCCCCCCceEecC-CCCCcccCCCCCCCccccCCHHHHHHHHH
Confidence 4689999999999998875433 44433222110 01111 22333222 21111123556666899999999987776
Q ss_pred hcccccccCCCCcceEeecC
Q 003671 496 KFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 496 ~~~~~~~~g~~~~~~~W~Dm 515 (804)
.+++- .. .++|||=.|.
T Consensus 327 ~lr~W--v~-~gVDGfRfDl 343 (1221)
T PRK14510 327 VLRSW--AK-RGVDGFRLDL 343 (1221)
T ss_pred HHHHH--HH-hCCCEEEEec
Confidence 65532 22 4577777773
No 54
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=51.71 E-value=22 Score=43.62 Aligned_cols=93 Identities=16% Similarity=0.153 Sum_probs=51.5
Q ss_pred ChHHHHHHHHHcCCeEEEEecC-ccccCCCh---hhhHHHHHcCceEEcCCCC-CeeeeecCCCcccccCCCHhHHHHHH
Q 003671 420 HPEEMQRKLATKGRHMVTIVDP-HIKRDDSY---WLHNEATEKGYYVKDATKR-DYDGWCWPGSSSYLDMLNPEIRTWWG 494 (804)
Q Consensus 420 ~p~~m~~~L~~~g~k~v~iidP-~i~~~~~y---~~~~~~~~~~~~vk~~~g~-~~~g~~WpG~~~~~Dftnp~a~~ww~ 494 (804)
+.++||+.+|++|+++|+=+-+ |....... ..++......||-.+.+.. .|. .|-|-..-+|+.||+++++..
T Consensus 246 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~~~~~~~--~~~g~gn~ln~~~p~vr~~i~ 323 (688)
T TIGR02100 246 EFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSFRGIDNASYYRLQPDDKRYYI--NDTGTGNTLNLSHPRVLQMVM 323 (688)
T ss_pred HHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcccccCCCCCcceEecCCCCceec--CCCCccccccCCCHHHHHHHH
Confidence 4689999999999999885443 44322110 0111111123343333311 122 233333468999999999877
Q ss_pred hhcccccccCCCCcceEeecCC
Q 003671 495 TKFSYENYVGSTPSLYIWNDMN 516 (804)
Q Consensus 495 ~~~~~~~~~g~~~~~~~W~Dmn 516 (804)
+.+++. ....++|||=+|.-
T Consensus 324 d~l~~W--~~e~gIDGfR~D~a 343 (688)
T TIGR02100 324 DSLRYW--VTEMHVDGFRFDLA 343 (688)
T ss_pred HHHHHH--HHHcCCcEEEEech
Confidence 765532 22245788878743
No 55
>PLN02784 alpha-amylase
Probab=47.86 E-value=72 Score=39.86 Aligned_cols=58 Identities=9% Similarity=0.271 Sum_probs=38.0
Q ss_pred HHHHHHHHhhhcCCCCceEEEeeccc--cC--CC---cceeECCCCCCC---hHHHHHHHHHcCCeEEEEe
Q 003671 379 EDVEQVDSKFDEHDIPYDVLWLDIEH--TD--GK---KYFTWDRLSFPH---PEEMQRKLATKGRHMVTIV 439 (804)
Q Consensus 379 ~~v~~v~~~~~~~~iP~D~iwlDi~~--~~--~~---~~ft~d~~~FP~---p~~m~~~L~~~g~k~v~ii 439 (804)
..+.+-+..+.+.|| ++|||---+ .. |+ .+|..| .+|.. .+.|++.+|++|+++++=+
T Consensus 521 ~~I~ekldyL~~LG~--taIWLpP~~~s~s~~GY~p~D~y~ld-s~yGT~~ELk~LI~a~H~~GIkVIlDi 588 (894)
T PLN02784 521 MELGEKAAELSSLGF--TVVWLPPPTESVSPEGYMPKDLYNLN-SRYGTIDELKDLVKSFHEVGIKVLGDA 588 (894)
T ss_pred HHHHHHHHHHHHhCC--CEEEeCCCCCCCCCCCcCcccccccC-cCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 355666667777776 899986422 11 22 234455 46764 5788999999999988743
No 56
>PRK10265 chaperone-modulator protein CbpM; Provisional
Probab=46.67 E-value=34 Score=31.23 Aligned_cols=45 Identities=20% Similarity=0.349 Sum_probs=37.1
Q ss_pred CCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhh
Q 003671 627 PDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMF 679 (804)
Q Consensus 627 p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~L 679 (804)
-+++++.+|.++|..-|--. ..+-|.|.+.....++++.++|+-|
T Consensus 19 i~~~~l~eLve~GlIep~~~--------~~~~~~F~~~~l~r~~~a~rL~~dl 63 (101)
T PRK10265 19 VSEEELNEIVGLGVIEPREI--------QETTWVFDDHAAIVVQRAVRLRHEL 63 (101)
T ss_pred cCHHHHHHHHHCCCeecCCC--------CcccceECHHHHHHHHHHHHHHHHc
Confidence 57999999999999998321 2356999887889999999999876
No 57
>PLN02361 alpha-amylase
Probab=45.87 E-value=1.2e+02 Score=34.71 Aligned_cols=57 Identities=9% Similarity=0.203 Sum_probs=36.3
Q ss_pred HHHHHHHhhhcCCCCceEEEeeccc--cCCCc-----ceeECCCCCCC---hHHHHHHHHHcCCeEEEEe
Q 003671 380 DVEQVDSKFDEHDIPYDVLWLDIEH--TDGKK-----YFTWDRLSFPH---PEEMQRKLATKGRHMVTIV 439 (804)
Q Consensus 380 ~v~~v~~~~~~~~iP~D~iwlDi~~--~~~~~-----~ft~d~~~FP~---p~~m~~~L~~~g~k~v~ii 439 (804)
.+.+-+..+++.|| ++|||-.-. ....+ ++..| .+|.+ .++|++.+|++|+|+++=+
T Consensus 30 ~i~~kl~~l~~lG~--t~iwl~P~~~~~~~~GY~~~d~y~~~-~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 30 NLEGKVPDLAKSGF--TSAWLPPPSQSLAPEGYLPQNLYSLN-SAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHHHHHHHHHcCC--CEEEeCCCCcCCCCCCCCcccccccC-cccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 45555556666666 899986432 11122 23444 35764 5688999999999988733
No 58
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=45.11 E-value=33 Score=41.99 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=56.7
Q ss_pred ChHHHHHHHHHcCCeEEEE-ecCccccC---CChhhhHHHHHcC-ceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHH
Q 003671 420 HPEEMQRKLATKGRHMVTI-VDPHIKRD---DSYWLHNEATEKG-YYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWG 494 (804)
Q Consensus 420 ~p~~m~~~L~~~g~k~v~i-idP~i~~~---~~y~~~~~~~~~~-~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~ 494 (804)
..+.||+.||+.|+.+|+= |=.|.... ..-..+ +++..+ ||-.+++|.... |.|-+.-+.-.+|-+|+|--
T Consensus 266 EfK~mV~~lHkaGI~VILDVVfNHTae~~~~g~t~~f-~~id~~~Yyr~~~dg~~~N---~TGcGNtln~~hpmvrk~iv 341 (697)
T COG1523 266 EFKDMVKALHKAGIEVILDVVFNHTAEGNELGPTLSF-RGIDPNYYYRLDPDGYYSN---GTGCGNTLNTEHPMVRKLIV 341 (697)
T ss_pred HHHHHHHHHHHcCCEEEEEEeccCcccccCcCccccc-ccCCcCceEEECCCCCeec---CCccCcccccCChHHHHHHH
Confidence 4579999999999998873 33454310 001123 344445 666677754322 45656678889999999877
Q ss_pred hhcccccccCCCCcceEeecCC
Q 003671 495 TKFSYENYVGSTPSLYIWNDMN 516 (804)
Q Consensus 495 ~~~~~~~~~g~~~~~~~W~Dmn 516 (804)
+.+++. .....+|||=.|+.
T Consensus 342 DsLrYW--v~e~hVDGFRFDLa 361 (697)
T COG1523 342 DSLRYW--VEEYHVDGFRFDLA 361 (697)
T ss_pred HHHHHH--HHHhCCCceeecch
Confidence 776542 22345677777764
No 59
>PRK09505 malS alpha-amylase; Reviewed
Probab=44.74 E-value=76 Score=38.98 Aligned_cols=24 Identities=8% Similarity=0.083 Sum_probs=18.8
Q ss_pred CCC---ChHHHHHHHHHcCCeEEEEec
Q 003671 417 SFP---HPEEMQRKLATKGRHMVTIVD 440 (804)
Q Consensus 417 ~FP---~p~~m~~~L~~~g~k~v~iid 440 (804)
+|. +.++|++++|++|+|+|+=+-
T Consensus 287 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 313 (683)
T PRK09505 287 NMGTEADLRTLVDEAHQRGIRILFDVV 313 (683)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 455 357899999999999987543
No 60
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=44.68 E-value=67 Score=38.35 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=45.6
Q ss_pred hHHHHHHHHHcCCeEEEEecC-ccccCCChh-hhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCH---hHHHHHHh
Q 003671 421 PEEMQRKLATKGRHMVTIVDP-HIKRDDSYW-LHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNP---EIRTWWGT 495 (804)
Q Consensus 421 p~~m~~~L~~~g~k~v~iidP-~i~~~~~y~-~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp---~a~~ww~~ 495 (804)
.++||+.+|++|+++|+=+-+ |...+..|. .| ..||-.+. ...| |. -+|+.+| +++++..+
T Consensus 162 ~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~-----~~y~~~~~------~~~w-g~--~~n~~~~~~~~vr~~i~~ 227 (542)
T TIGR02402 162 LKALVDAAHGLGLGVILDVVYNHFGPEGNYLPRY-----APYFTDRY------STPW-GA--AINFDGPGSDEVRRYILD 227 (542)
T ss_pred HHHHHHHHHHCCCEEEEEEccCCCCCcccccccc-----CccccCCC------CCCC-CC--ccccCCCcHHHHHHHHHH
Confidence 578999999999999885443 554433321 11 11442211 1223 32 4899999 88887766
Q ss_pred hcccccccCCCCcceEeecC
Q 003671 496 KFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 496 ~~~~~~~~g~~~~~~~W~Dm 515 (804)
.+++. ....++|||=.|.
T Consensus 228 ~~~~W--~~e~~iDGfR~D~ 245 (542)
T TIGR02402 228 NALYW--LREYHFDGLRLDA 245 (542)
T ss_pred HHHHH--HHHhCCcEEEEeC
Confidence 55421 1123467776664
No 61
>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. This CD includes the C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. AcuB is putatively involved in the anaerobic catabolism of acetoin, and related proteins. Studies report the induction of AcuB by nitrate respiration and also by fermentation. Since acetoin can be secreted and later serve as a source of carbon, it has been proposed that, during anaerobic growth when other carbon sources are exhausted, the induction of the AcuB protein results in acetoin catabolism. AcuB-like proteins have two N-terminal tandem CBS domains and a single C-terminal ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=41.89 E-value=77 Score=26.05 Aligned_cols=56 Identities=9% Similarity=0.243 Sum_probs=38.7
Q ss_pred HHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeEE
Q 003671 380 DVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMV 436 (804)
Q Consensus 380 ~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v 436 (804)
.+.++.+-+.++++-++.+...-.-..+.....+.-+. .++++..+.|.++|++++
T Consensus 14 ~l~~i~~~l~~~~inI~~i~~~~~~~~~~~~v~i~v~~-~~~~~~~~~L~~~G~~v~ 69 (72)
T cd04883 14 QLADIAAIFKDRGVNIVSVLVYPSKEEDNKILVFRVQT-MNPRPIIEDLRRAGYEVL 69 (72)
T ss_pred HHHHHHHHHHHcCCCEEEEEEeccCCCCeEEEEEEEec-CCHHHHHHHHHHCCCeee
Confidence 56778888999999999887543222344444443333 566799999999998753
No 62
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism]
Probab=40.47 E-value=50 Score=39.43 Aligned_cols=51 Identities=12% Similarity=0.159 Sum_probs=34.5
Q ss_pred CCCCceEEEeecccc-------CCCcceeECCCCCCC---hHHHHHHHHHcCCeEEEEecC
Q 003671 391 HDIPYDVLWLDIEHT-------DGKKYFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP 441 (804)
Q Consensus 391 ~~iP~D~iwlDi~~~-------~~~~~ft~d~~~FP~---p~~m~~~L~~~g~k~v~iidP 441 (804)
.++.++++|+---+. ..-.++++=..+|.. .+++++.+|+.|+++|+-+=|
T Consensus 50 ~~lG~taiWisP~~~s~~~~~GY~~~d~~~l~p~fGt~edf~~Li~~~h~~gi~ii~D~vi 110 (545)
T KOG0471|consen 50 KELGFTAIWLSPFTKSSKPDFGYDASDLEQLRPRFGTEEDFKELILAMHKLGIKIIADLVI 110 (545)
T ss_pred HhcCCceEEeCCCcCCCHHHhccCccchhhhcccccHHHHHHHHHHHHhhcceEEEEeecc
Confidence 567889999964332 222344443357775 468899999999998876544
No 63
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=39.41 E-value=1.7e+02 Score=33.85 Aligned_cols=130 Identities=20% Similarity=0.265 Sum_probs=67.6
Q ss_pred CHHHHHHHHHhhhcCCCCceEEEeecccc---CCCc-----ceeECCCCCCC---hHHHHHHHHHcCCeEEEEecC-ccc
Q 003671 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEHT---DGKK-----YFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP-HIK 444 (804)
Q Consensus 377 ~~~~v~~v~~~~~~~~iP~D~iwlDi~~~---~~~~-----~ft~d~~~FP~---p~~m~~~L~~~g~k~v~iidP-~i~ 444 (804)
+-.-|.+-+.-+++.|| |+||+---+. ...+ +...|+ .|.. .+++++++|++|+|+++=+-. |.+
T Consensus 27 dl~Gi~~~LdYl~~LGv--~aiwl~Pi~~s~~~~~gY~~~Dy~~id~-~~Gt~~d~~~li~~~H~~gi~vi~D~V~NH~s 103 (505)
T COG0366 27 DLKGITEKLDYLKELGV--DAIWLSPIFESPQADHGYDVSDYTKVDP-HFGTEEDFKELVEEAHKRGIKVILDLVFNHTS 103 (505)
T ss_pred cHHhHHHhhhHHHHhCC--CEEEeCCCCCCCccCCCccccchhhcCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccCcCC
Confidence 33444444555555555 8999873221 1111 223444 5664 468899999999998875432 333
Q ss_pred cCCChhhhHHHHHc-------CceE-EcC------CC---CCeeeeec----CC--------Ccc-cccCCCHhHHHHHH
Q 003671 445 RDDSYWLHNEATEK-------GYYV-KDA------TK---RDYDGWCW----PG--------SSS-YLDMLNPEIRTWWG 494 (804)
Q Consensus 445 ~~~~y~~~~~~~~~-------~~~v-k~~------~g---~~~~g~~W----pG--------~~~-~~Dftnp~a~~ww~ 494 (804)
.+ .+.+.++.+. ++|+ ++. .. ..+.+.-| .+ ... -+++.||+++++..
T Consensus 104 ~~--~~~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~~ 181 (505)
T COG0366 104 DE--HPWFKEARSSKPNPKRSDYYIWRDPDPDGTPPNNWFSVFGGDAWTWGNTGEYYLHLFSSEQPDLNWENPEVREELL 181 (505)
T ss_pred Cc--cHHHHHHhcCCCCcccCCCceEccCcccCCCCCcchhhcCCCCCCcCCCCceEEEecCCCCCCcCCCCHHHHHHHH
Confidence 22 3445555421 4444 111 00 11222223 11 112 26899999999888
Q ss_pred hhcccccccCCCCcceEeec
Q 003671 495 TKFSYENYVGSTPSLYIWND 514 (804)
Q Consensus 495 ~~~~~~~~~g~~~~~~~W~D 514 (804)
+.+++... .++|||=+|
T Consensus 182 ~~~~~W~~---~gvDGfRlD 198 (505)
T COG0366 182 DVVKFWLD---KGVDGFRLD 198 (505)
T ss_pred HHHHHHHH---cCCCeEEec
Confidence 75443222 345565555
No 64
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=39.08 E-value=37 Score=42.80 Aligned_cols=73 Identities=15% Similarity=0.127 Sum_probs=40.7
Q ss_pred ChHHHHHHHHHcCCeEEEEe-cCccccCCC--hhhhHHHHHcCceEEc-CCCCCeeeeecCCCcccccCCCHhHHHHHHh
Q 003671 420 HPEEMQRKLATKGRHMVTIV-DPHIKRDDS--YWLHNEATEKGYYVKD-ATKRDYDGWCWPGSSSYLDMLNPEIRTWWGT 495 (804)
Q Consensus 420 ~p~~m~~~L~~~g~k~v~ii-dP~i~~~~~--y~~~~~~~~~~~~vk~-~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~ 495 (804)
+.++||+.||++|+++|+=+ =-|...... ..+++. ...+||.+. .+|....+.|+. -.+..||.++++..+
T Consensus 405 Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~-~~P~YY~r~~~~G~~~n~~~~~----d~a~e~~~Vrk~iiD 479 (898)
T TIGR02103 405 EFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDK-IVPGYYHRLNEDGGVENSTCCS----NTATEHRMMAKLIVD 479 (898)
T ss_pred HHHHHHHHHHHCCCEEEEEeecccccccCccCcccccc-cCcHhhEeeCCCCCeecCCCCc----CCCCCCHHHHHHHHH
Confidence 46799999999999998743 334443211 012222 123566654 344432334442 236788988775554
Q ss_pred hc
Q 003671 496 KF 497 (804)
Q Consensus 496 ~~ 497 (804)
.+
T Consensus 480 sl 481 (898)
T TIGR02103 480 SL 481 (898)
T ss_pred HH
Confidence 43
No 65
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=37.94 E-value=1.3e+02 Score=37.24 Aligned_cols=70 Identities=20% Similarity=0.356 Sum_probs=50.0
Q ss_pred EEEEecCCHHHHHHHHHHhc------CC---CCCCccccccccccccC--CC--CHHHHHHHHHhhhcCCCCceEEEeec
Q 003671 336 TFFFVGPGPKDVVRQYTSVT------GM---PSMPPLFSIAYHQCRWN--YR--DEEDVEQVDSKFDEHDIPYDVLWLDI 402 (804)
Q Consensus 336 ~y~f~G~tp~~vi~~Y~~lt------G~---p~lpP~walG~~q~rw~--Y~--~~~~v~~v~~~~~~~~iP~D~iwlDi 402 (804)
+|+=.|.+|-+++++=.+.. .+ ..-.|.|-=++-.|.|+ |. +++.|++.++.+.+.|||.-.+-+|.
T Consensus 156 l~v~~g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viIDD 235 (747)
T PF05691_consen 156 LYVHAGDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIIDD 235 (747)
T ss_pred EEEeccCCHHHHHHHHHHHHHhcccccccccccchhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEec
Confidence 45557889998888754432 21 22344454344459996 43 57789999999999999999999998
Q ss_pred ccc
Q 003671 403 EHT 405 (804)
Q Consensus 403 ~~~ 405 (804)
.|+
T Consensus 236 GWQ 238 (747)
T PF05691_consen 236 GWQ 238 (747)
T ss_pred chh
Confidence 875
No 66
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism]
Probab=36.78 E-value=1.6e+02 Score=31.87 Aligned_cols=108 Identities=17% Similarity=0.191 Sum_probs=61.9
Q ss_pred CCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCccccCCChhhhHHHHHcCceEEcCC--CCC
Q 003671 392 DIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRDDSYWLHNEATEKGYYVKDAT--KRD 469 (804)
Q Consensus 392 ~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~~~y~~~~~~~~~~~~vk~~~--g~~ 469 (804)
.-|.|.+.+|..|... ..=|-.++=++.+++.|+++|..++=+-. .+|..| -++....+.++ |+.
T Consensus 41 ~~~f~llVVDps~~g~--------~~~~~~~eelr~~~~gg~~pIAYlsIg~a--e~yR~Y---wd~~w~~~~p~wLg~e 107 (300)
T COG2342 41 NSPFDLLVVDPSYCGP--------FNTPWTIEELRTKADGGVKPIAYLSIGEA--ESYRFY---WDKYWLTGRPDWLGEE 107 (300)
T ss_pred cCCCcEEEEeccccCC--------CCCcCcHHHHHHHhcCCeeEEEEEechhh--hhhhhH---hhhhhhcCCcccccCC
Confidence 4588999999764321 11133456677777889888888774433 445444 33333333222 111
Q ss_pred eeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecCCCC
Q 003671 470 YDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMNEP 518 (804)
Q Consensus 470 ~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~DmnEp 518 (804)
..-|||+ ..+=|-.|+=++-+.+.++....+ |++|+-+|-=++
T Consensus 108 --dP~W~Gn-y~VkYW~~eWkdii~~~l~rL~d~---GfdGvyLD~VD~ 150 (300)
T COG2342 108 --DPEWPGN-YAVKYWEPEWKDIIRSYLDRLIDQ---GFDGVYLDVVDA 150 (300)
T ss_pred --CCCCCCC-ceeeccCHHHHHHHHHHHHHHHHc---cCceEEEeeech
Confidence 1239996 455666777777676666543333 477777776543
No 67
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=35.85 E-value=2.2e+02 Score=30.66 Aligned_cols=45 Identities=18% Similarity=0.426 Sum_probs=32.4
Q ss_pred eEEEeecccc----CCCcceeEC----CCCCCChHHHHHHHHHcCCeEEEEec
Q 003671 396 DVLWLDIEHT----DGKKYFTWD----RLSFPHPEEMQRKLATKGRHMVTIVD 440 (804)
Q Consensus 396 D~iwlDi~~~----~~~~~ft~d----~~~FP~p~~m~~~L~~~g~k~v~iid 440 (804)
.++.+|+|-+ ...+.+.|. ..-+|+-.++++.|+++|+++++...
T Consensus 159 ~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~ 211 (300)
T PHA02530 159 KAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSG 211 (300)
T ss_pred CEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeC
Confidence 5777887753 233445563 45688888999999999999887643
No 68
>PLN03244 alpha-amylase; Provisional
Probab=34.29 E-value=47 Score=41.05 Aligned_cols=74 Identities=9% Similarity=0.164 Sum_probs=41.2
Q ss_pred CCCCh---HHHHHHHHHcCCeEEEEecC-ccccCCChhhhH-HHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHH
Q 003671 417 SFPHP---EEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHN-EATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRT 491 (804)
Q Consensus 417 ~FP~p---~~m~~~L~~~g~k~v~iidP-~i~~~~~y~~~~-~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ 491 (804)
+|..| +.||+.+|++|+++++=+-| |...+..+.+.. ++...-||-.+..|. ...| |. ...|+.+|++++
T Consensus 436 RYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fDGt~~~Yf~~~~~g~---~~~W-Gs-~~fnyg~~EVr~ 510 (872)
T PLN03244 436 RYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFDGSNDCYFHTGKRGH---HKHW-GT-RMFKYGDLDVLH 510 (872)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCccccchhhcCCCccceeccCCCCc---cCCC-CC-ceecCCCHHHHH
Confidence 46554 68899999999999985544 555443111111 111112333222221 1346 43 578999999987
Q ss_pred HHHh
Q 003671 492 WWGT 495 (804)
Q Consensus 492 ww~~ 495 (804)
+..+
T Consensus 511 FLLs 514 (872)
T PLN03244 511 FLIS 514 (872)
T ss_pred HHHH
Confidence 4443
No 69
>PLN02960 alpha-amylase
Probab=32.31 E-value=58 Score=40.79 Aligned_cols=111 Identities=14% Similarity=0.206 Sum_probs=59.5
Q ss_pred CHHHHH-HHHHhhhcCCCCceEEEeec--ccc----CC---CcceeECCCCCCCh---HHHHHHHHHcCCeEEEEecC-c
Q 003671 377 DEEDVE-QVDSKFDEHDIPYDVLWLDI--EHT----DG---KKYFTWDRLSFPHP---EEMQRKLATKGRHMVTIVDP-H 442 (804)
Q Consensus 377 ~~~~v~-~v~~~~~~~~iP~D~iwlDi--~~~----~~---~~~ft~d~~~FP~p---~~m~~~L~~~g~k~v~iidP-~ 442 (804)
+-.++. +++.-+++.|| .+|||=- ++. -| ..+|..++ +|-.| +.||+.+|++|+++|+=+-| |
T Consensus 414 tf~~~~e~~LdYLk~LGv--t~IeLmPv~e~~~~~swGY~~~~yfa~~~-~yGtp~dfk~LVd~aH~~GI~VILDvV~NH 490 (897)
T PLN02960 414 SFKEFTQKVLPHVKKAGY--NAIQLIGVQEHKDYSSVGYKVTNFFAVSS-RFGTPDDFKRLVDEAHGLGLLVFLDIVHSY 490 (897)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCCCccc-ccCCHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 334443 56777777776 6777741 111 11 12333333 45554 68899999999999985443 5
Q ss_pred cccCCChh--hhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhh
Q 003671 443 IKRDDSYW--LHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTK 496 (804)
Q Consensus 443 i~~~~~y~--~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~ 496 (804)
...+.... .|+ +...-||-.+..|. ...| | +..+||.+|+++++..+.
T Consensus 491 ~~~d~~~~L~~FD-G~~~~Yf~~~~~g~---~~~W-G-~~~fNy~~~eVr~fLlsn 540 (897)
T PLN02960 491 AAADEMVGLSLFD-GSNDCYFHSGKRGH---HKRW-G-TRMFKYGDHEVLHFLLSN 540 (897)
T ss_pred cCCccccchhhcC-CCccceeecCCCCc---cCCC-C-CcccCCCCHHHHHHHHHH
Confidence 55543111 121 11111332222221 1235 3 356899999999855443
No 70
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=32.25 E-value=39 Score=41.73 Aligned_cols=107 Identities=17% Similarity=0.287 Sum_probs=55.3
Q ss_pred HHHHHhhhcCCCCceEEEeec--ccc--C--C---CcceeECCCCCCCh---HHHHHHHHHcCCeEEEEecC-ccccCC-
Q 003671 382 EQVDSKFDEHDIPYDVLWLDI--EHT--D--G---KKYFTWDRLSFPHP---EEMQRKLATKGRHMVTIVDP-HIKRDD- 447 (804)
Q Consensus 382 ~~v~~~~~~~~iP~D~iwlDi--~~~--~--~---~~~ft~d~~~FP~p---~~m~~~L~~~g~k~v~iidP-~i~~~~- 447 (804)
.+++..+++.|+ ++|||=- ++. . | ..+|..+ .+|.+| ++||+.+|++|+++++=+-| |...+.
T Consensus 254 ~~~L~ylk~LG~--t~I~LmPi~e~~~~~~wGY~~~~~fa~~-~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~ 330 (758)
T PLN02447 254 DDVLPRIKALGY--NAVQLMAIQEHAYYGSFGYHVTNFFAVS-SRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTL 330 (758)
T ss_pred HHHHHHHHHcCC--CEEEECCccccCCCCCCCcCcccCcccc-cccCCHHHHHHHHHHHHHCCCEEEEEecccccccccc
Confidence 345555666555 5666531 111 0 1 1234444 356654 68899999999999985544 554321
Q ss_pred -ChhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhc
Q 003671 448 -SYWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKF 497 (804)
Q Consensus 448 -~y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~ 497 (804)
+...|+ +....||-.+..|. . ..| | +..+|+.+++++++..+.+
T Consensus 331 ~gl~~fD-g~~~~Yf~~~~~g~--~-~~w-~-~~~~N~~~~eVr~fLl~~~ 375 (758)
T PLN02447 331 DGLNGFD-GTDGSYFHSGPRGY--H-WLW-D-SRLFNYGNWEVLRFLLSNL 375 (758)
T ss_pred ccccccC-CCCccccccCCCCC--c-CcC-C-CceecCCCHHHHHHHHHHH
Confidence 111121 11123333222221 1 224 2 3468999999987554443
No 71
>PRK15447 putative protease; Provisional
Probab=32.06 E-value=70 Score=35.08 Aligned_cols=107 Identities=14% Similarity=0.134 Sum_probs=60.9
Q ss_pred HHHHHHHHhhhcCCCCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCcc-ccCCChhhhHHHHH
Q 003671 379 EDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHI-KRDDSYWLHNEATE 457 (804)
Q Consensus 379 ~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i-~~~~~y~~~~~~~~ 457 (804)
..++.......+.| +|+|++..+.-..+..|+. .+.++.++.+|+.|.++.+- -|.| ..+.......+..+
T Consensus 15 ~~~~~~~~~~~~~g--aDaVY~g~~~~~~R~~f~~-----~~l~e~v~~~~~~gkkvyva-~p~i~~~~~e~~~l~~~l~ 86 (301)
T PRK15447 15 ETVRDFYQRAADSP--VDIVYLGETVCSKRRELKV-----GDWLELAERLAAAGKEVVLS-TLALVEAPSELKELRRLVE 86 (301)
T ss_pred CCHHHHHHHHHcCC--CCEEEECCccCCCccCCCH-----HHHHHHHHHHHHcCCEEEEE-ecccccCHHHHHHHHHHHh
Confidence 34556666666666 8999999554332322322 35678999999999987764 4555 33444444555555
Q ss_pred cCce---EEcCCCCC-eeeeecCCC----cccccCCCHhHHHHHHhh
Q 003671 458 KGYY---VKDATKRD-YDGWCWPGS----SSYLDMLNPEIRTWWGTK 496 (804)
Q Consensus 458 ~~~~---vk~~~g~~-~~g~~WpG~----~~~~Dftnp~a~~ww~~~ 496 (804)
.+.. |.|. |.. +... .|. +..+.-+|..+.++|.+.
T Consensus 87 ~~~~~v~v~d~-g~l~~~~e--~~~~l~~d~~lni~N~~a~~~l~~~ 130 (301)
T PRK15447 87 NGEFLVEANDL-GAVRLLAE--RGLPFVAGPALNCYNAATLALLARL 130 (301)
T ss_pred cCCCEEEEeCH-HHHHHHHh--cCCCEEEecccccCCHHHHHHHHHc
Confidence 5422 2221 110 0000 121 134455899999999874
No 72
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=31.68 E-value=1.4e+02 Score=34.22 Aligned_cols=90 Identities=14% Similarity=0.273 Sum_probs=55.4
Q ss_pred HHHHHHHhhhcCCCCceEEEeecccc--C--CCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCc-----------cc
Q 003671 380 DVEQVDSKFDEHDIPYDVLWLDIEHT--D--GKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPH-----------IK 444 (804)
Q Consensus 380 ~v~~v~~~~~~~~iP~D~iwlDi~~~--~--~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~-----------i~ 444 (804)
.++.-++.+++.| +|+|-+|+=|- + +-+.|.|. .-+++.+-+++.|.|+.+++.=| |.
T Consensus 17 ~~~~~L~~LK~~G--V~GVmvdvWWGiVE~~~p~~ydWs-----~Y~~l~~~vr~~GLk~~~vmsfH~cGgNvgD~~~Ip 89 (402)
T PF01373_consen 17 ALEAQLRALKSAG--VDGVMVDVWWGIVEGEGPQQYDWS-----GYRELFEMVRDAGLKLQVVMSFHQCGGNVGDDCNIP 89 (402)
T ss_dssp HHHHHHHHHHHTT--EEEEEEEEEHHHHTGSSTTB---H-----HHHHHHHHHHHTT-EEEEEEE-S-BSSSTTSSSEB-
T ss_pred HHHHHHHHHHHcC--CcEEEEEeEeeeeccCCCCccCcH-----HHHHHHHHHHHcCCeEEEEEeeecCCCCCCCccCCc
Confidence 5666667777766 58888886552 2 22345554 45789999999999999998433 33
Q ss_pred cCCChhhhHHHHHcCceEEcCCCCC---eeeeecCCC
Q 003671 445 RDDSYWLHNEATEKGYYVKDATKRD---YDGWCWPGS 478 (804)
Q Consensus 445 ~~~~y~~~~~~~~~~~~vk~~~g~~---~~g~~WpG~ 478 (804)
.. --+.+.+.++++|.++..|.. +.-.++.|.
T Consensus 90 LP--~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~gr 124 (402)
T PF01373_consen 90 LP--SWVWEIGKKDDIFYTDRSGNRNKEYLSPVLDGR 124 (402)
T ss_dssp S---HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBTTB
T ss_pred CC--HHHHhccccCCcEEECCCCCcCcceeecccCCc
Confidence 21 146778888899999999973 443334454
No 73
>PRK12313 glycogen branching enzyme; Provisional
Probab=31.36 E-value=60 Score=39.45 Aligned_cols=87 Identities=15% Similarity=0.160 Sum_probs=46.5
Q ss_pred hHHHHHHHHHcCCeEEEEecC-ccccCCCh-hhhHHHHHcCce-EEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhc
Q 003671 421 PEEMQRKLATKGRHMVTIVDP-HIKRDDSY-WLHNEATEKGYY-VKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKF 497 (804)
Q Consensus 421 p~~m~~~L~~~g~k~v~iidP-~i~~~~~y-~~~~~~~~~~~~-vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~ 497 (804)
.++||+.+|++|+++|+=+-| |...+... ..|+ ...++ ..+... .+. ..|. +.-+|+.||++|++..+.+
T Consensus 222 ~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~~~~~~---~~~~~~~~~~~~-~~~-~~w~--~~~~n~~~~~vr~~l~~~~ 294 (633)
T PRK12313 222 FMYLVDALHQNGIGVILDWVPGHFPKDDDGLAYFD---GTPLYEYQDPRR-AEN-PDWG--ALNFDLGKNEVRSFLISSA 294 (633)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCcccccccC---CCcceeecCCCC-CcC-CCCC--CcccCCCCHHHHHHHHHHH
Confidence 478999999999999885544 54433211 0010 00011 111111 010 1243 2457999999998777655
Q ss_pred ccccccCCCCcceEeecCC
Q 003671 498 SYENYVGSTPSLYIWNDMN 516 (804)
Q Consensus 498 ~~~~~~g~~~~~~~W~Dmn 516 (804)
++ +....++|||=.|+-
T Consensus 295 ~~--W~~~~~iDG~R~D~~ 311 (633)
T PRK12313 295 LF--WLDEYHLDGLRVDAV 311 (633)
T ss_pred HH--HHHHhCCcEEEEcCh
Confidence 42 112235778878853
No 74
>smart00642 Aamy Alpha-amylase domain.
Probab=30.76 E-value=1.3e+02 Score=29.99 Aligned_cols=62 Identities=15% Similarity=0.190 Sum_probs=37.0
Q ss_pred CHHHHHHHHHhhhcCCCCceEEEeeccccCC--------C---cceeECCCCCCC---hHHHHHHHHHcCCeEEEEecC
Q 003671 377 DEEDVEQVDSKFDEHDIPYDVLWLDIEHTDG--------K---KYFTWDRLSFPH---PEEMQRKLATKGRHMVTIVDP 441 (804)
Q Consensus 377 ~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~--------~---~~ft~d~~~FP~---p~~m~~~L~~~g~k~v~iidP 441 (804)
+-+.+.+-+..+++.|+ ++|||-.-+... + .++..|+ +|-+ .++|++++|++|+++++=+-|
T Consensus 17 ~~~gi~~~l~yl~~lG~--~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~-~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 17 DLQGIIEKLDYLKDLGV--TAIWLSPIFESPQGYPSYHGYDISDYKQIDP-RFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CHHHHHHHHHHHHHCCC--CEEEECcceeCCCCCCCCCCcCccccCCCCc-ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 34555555556677664 888886322111 1 1122333 4443 468899999999998875544
No 75
>PF03537 Glyco_hydro_114: Glycoside-hydrolase family GH114; InterPro: IPR004352 Eighty-one archaeal-like genes, ranging in size from 4-20kb, are clustered in 15 regions of the Thermotoga maritima genome []. Conservation of gene order between T. maritima and Archaea in many of these regions suggests that lateral gene transfer may have occurred between thermophilic Eubacteria and Archaea []. One of the T. maritima sequences (hypothetical protein TM1410) shares similarity with Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1477 and with hypothetical protein DR0705 from Deinococcus radiodurans. The sequences are characterised by relatively variable N- and C-terminal domains, and a more conserved central domain. They share no similarity with any other known, functionally or structurally characterised proteins. ; PDB: 2AAM_F.
Probab=30.15 E-value=77 Score=27.19 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=23.7
Q ss_pred CCceEEEeeccccCCCcceeECCCCCCChHHHHHHHHHcCCeEEEEecCcc
Q 003671 393 IPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHI 443 (804)
Q Consensus 393 iP~D~iwlDi~~~~~~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i 443 (804)
-++|++-+|... .+++.|+.||++|++++..++-+-
T Consensus 25 ~~~~v~~iD~~~---------------~~~~~I~~L~~~G~~vicY~s~Gs 60 (74)
T PF03537_consen 25 PDVDVVVIDLFD---------------FSKEEIARLKAQGKKVICYFSIGS 60 (74)
T ss_dssp SS-SEEEE-SBS-----------------HHHHHHHHHTT-EEEEEEESSE
T ss_pred CCCCEEEECCcc---------------CCHHHHHHHHHCCCEEEEEEeCce
Confidence 566777666442 457899999999999998887543
No 76
>PRK14706 glycogen branching enzyme; Provisional
Probab=29.67 E-value=47 Score=40.47 Aligned_cols=85 Identities=15% Similarity=0.067 Sum_probs=43.1
Q ss_pred hHHHHHHHHHcCCeEEEEecC-ccccCCChhhhHHHHH-cC-ceEEcC-CCCCeeeeecCCCcccccCCCHhHHHHHHhh
Q 003671 421 PEEMQRKLATKGRHMVTIVDP-HIKRDDSYWLHNEATE-KG-YYVKDA-TKRDYDGWCWPGSSSYLDMLNPEIRTWWGTK 496 (804)
Q Consensus 421 p~~m~~~L~~~g~k~v~iidP-~i~~~~~y~~~~~~~~-~~-~~vk~~-~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~ 496 (804)
.++||+.+|++|+++|+=+-| |...+... .. ..+ .. |...+. .|. ...| | +...|+.||+++++..+.
T Consensus 219 ~~~lv~~~H~~gi~VilD~v~nH~~~~~~~-l~--~~dg~~~y~~~~~~~g~---~~~w-~-~~~~~~~~~eVr~~l~~~ 290 (639)
T PRK14706 219 FKYLVNHLHGLGIGVILDWVPGHFPTDESG-LA--HFDGGPLYEYADPRKGY---HYDW-N-TYIFDYGRNEVVMFLIGS 290 (639)
T ss_pred HHHHHHHHHHCCCEEEEEecccccCcchhh-hh--ccCCCcceeccCCcCCc---CCCC-C-CcccCCCCHHHHHHHHHH
Confidence 468899999999999885544 54433210 00 000 00 101111 110 1234 2 345899999999866554
Q ss_pred cccccccCCCCcceEeecC
Q 003671 497 FSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 497 ~~~~~~~g~~~~~~~W~Dm 515 (804)
..+. ....++||+=.|.
T Consensus 291 ~~~W--~~e~~iDG~R~Da 307 (639)
T PRK14706 291 ALKW--LQDFHVDGLRVDA 307 (639)
T ss_pred HHHH--HHHhCCCeEEEee
Confidence 4321 1112356665653
No 77
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism]
Probab=28.78 E-value=55 Score=39.81 Aligned_cols=74 Identities=15% Similarity=0.352 Sum_probs=47.0
Q ss_pred ChHHHHHHHHHcCCeEEE-EecCccccCC--ChhhhHHHHH-cCceEEcCCCCCeeeeecCCCcccccCCCHhHHH----
Q 003671 420 HPEEMQRKLATKGRHMVT-IVDPHIKRDD--SYWLHNEATE-KGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRT---- 491 (804)
Q Consensus 420 ~p~~m~~~L~~~g~k~v~-iidP~i~~~~--~y~~~~~~~~-~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~---- 491 (804)
+.+.||+++|..|+.+++ +|.-|...++ ++..| ++.+ ..||-+++.| .-|-+.+...+..+|++..
T Consensus 312 efK~lVd~aHs~GI~VlLDVV~sHaa~n~~d~l~~f-dGid~~~Yf~~~~r~-----~h~~~~~r~fn~~~~~V~rflL~ 385 (757)
T KOG0470|consen 312 EFKELVDKAHSLGIEVLLDVVHSHAAKNSKDGLNMF-DGIDNSVYFHSGPRG-----YHNSWCSRLFNYNHPVVLRFLLS 385 (757)
T ss_pred HHHHHHHHHhhCCcEEehhhhhhhcccCcCCcchhc-cCcCCceEEEeCCcc-----cccccccccccCCCHHHHHHHHH
Confidence 568999999999998776 4555555433 23333 3445 4555555522 2233345688999999975
Q ss_pred ---HHHhhccc
Q 003671 492 ---WWGTKFSY 499 (804)
Q Consensus 492 ---ww~~~~~~ 499 (804)
||-..++.
T Consensus 386 nLr~WVtEY~v 396 (757)
T KOG0470|consen 386 NLRWWVTEYHV 396 (757)
T ss_pred HHHHHHHheec
Confidence 77776653
No 78
>PRK05402 glycogen branching enzyme; Provisional
Probab=27.13 E-value=78 Score=39.19 Aligned_cols=96 Identities=14% Similarity=0.123 Sum_probs=49.1
Q ss_pred eeECCCCCCCh---HHHHHHHHHcCCeEEEEecC-ccccCCCh-hhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCC
Q 003671 411 FTWDRLSFPHP---EEMQRKLATKGRHMVTIVDP-HIKRDDSY-WLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDML 485 (804)
Q Consensus 411 ft~d~~~FP~p---~~m~~~L~~~g~k~v~iidP-~i~~~~~y-~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dft 485 (804)
|..++ +|-++ ++||+.+|++|+++|+=+-| |...+... ..|+ + ..-|+-.+.....+ ..|- +..+|+.
T Consensus 305 ~ai~~-~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~-~-~~~y~~~~~~~~~~--~~w~--~~~~n~~ 377 (726)
T PRK05402 305 YAPTS-RFGTPDDFRYFVDACHQAGIGVILDWVPAHFPKDAHGLARFD-G-TALYEHADPREGEH--PDWG--TLIFNYG 377 (726)
T ss_pred CCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccchhccC-C-CcceeccCCcCCcc--CCCC--CccccCC
Confidence 44443 45554 68899999999999885544 54433210 0000 0 00011111100000 1232 2357999
Q ss_pred CHhHHHHHHhhcccccccCCCCcceEeecC
Q 003671 486 NPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 486 np~a~~ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
||++++...+.+++ +....++|||=+|+
T Consensus 378 ~~~v~~~l~~~~~~--W~~e~~iDG~R~D~ 405 (726)
T PRK05402 378 RNEVRNFLVANALY--WLEEFHIDGLRVDA 405 (726)
T ss_pred CHHHHHHHHHHHHH--HHHHhCCcEEEECC
Confidence 99999876665442 11123467777774
No 79
>PRK06769 hypothetical protein; Validated
Probab=25.31 E-value=93 Score=30.94 Aligned_cols=47 Identities=15% Similarity=0.296 Sum_probs=33.3
Q ss_pred CceEEEeeccccC-CCcceeE--CCCCCCChHHHHHHHHHcCCeEEEEec
Q 003671 394 PYDVLWLDIEHTD-GKKYFTW--DRLSFPHPEEMQRKLATKGRHMVTIVD 440 (804)
Q Consensus 394 P~D~iwlDi~~~~-~~~~ft~--d~~~FP~p~~m~~~L~~~g~k~v~iid 440 (804)
|+-+|.+|-|-+= +.+++.. +-+-||+.+++++.|+++|+++.+..+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn 52 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTN 52 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEEC
Confidence 5678888977653 2222111 234689999999999999999888754
No 80
>TIGR00847 ccoS cytochrome oxidase maturation protein, cbb3-type. CcoS from Rhodobacter capsulatus has been shown essential for incorporation of redox-active prosthetic groups (heme, Cu) into cytochrome cbb(3) oxidase. FixS of Bradyrhizobium japonicum appears to have the same function. Members of this family are found so far in organisms with a cbb3-type cytochrome oxidase, including Neisseria meningitidis, Helicobacter pylori, Campylobacter jejuni, Caulobacter crescentus, Bradyrhizobium japonicum, and Rhodobacter capsulatus.
Probab=24.96 E-value=53 Score=26.30 Aligned_cols=27 Identities=19% Similarity=0.337 Sum_probs=16.7
Q ss_pred chhHHHHHHHHHHHHhccCCceeeccCccccCC
Q 003671 6 PATISLSLILLAFLTYQAPPVLSWKKDEFRNCN 38 (804)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~C~ 38 (804)
|.++++++++|++++| ||+.+.|-.=+
T Consensus 9 piSl~l~~~~l~~f~W------avk~GQfDDle 35 (51)
T TIGR00847 9 PISLLLGGVGLVAFLW------SLKSGQYDDLK 35 (51)
T ss_pred HHHHHHHHHHHHHHHH------HHccCCCCCCc
Confidence 4455555666666654 88888876543
No 81
>PF13591 MerR_2: MerR HTH family regulatory protein
Probab=24.88 E-value=1.1e+02 Score=26.73 Aligned_cols=44 Identities=20% Similarity=0.298 Sum_probs=35.4
Q ss_pred CCHHHHHHHhhcccccccccccCCCCCCCCCccccChhHHHHHHHHHHHHHhh
Q 003671 627 PDTELLVRWYQLGAYYPFFRAHAHHDTKRREPWLFGERNTQLIREAIHVRYMF 679 (804)
Q Consensus 627 p~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~L 679 (804)
-+++...+|.+.|..-|.-.. .+ |.|+.....-++++.++|+-|
T Consensus 12 i~~~~l~~lve~Gli~p~~~~--------~~-~~f~~~~l~rl~~~~rL~~Dl 55 (84)
T PF13591_consen 12 IEPEFLRELVEEGLIEPEGEE--------EE-WYFSEEDLARLRRIRRLHRDL 55 (84)
T ss_pred cCHHHHHHHHHCCCeeecCCC--------Ce-eeECHHHHHHHHHHHHHHHHc
Confidence 468999999999999995432 23 558888888899999999876
No 82
>PRK12563 sulfate adenylyltransferase subunit 2; Provisional
Probab=24.74 E-value=1.8e+02 Score=32.28 Aligned_cols=75 Identities=20% Similarity=0.287 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHhcCCCCCCccccccccccccCCCCHHHHHHHHHhh-hcCCCCceEEEeeccccCCCcceeECCCCCCCh
Q 003671 343 GPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKF-DEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHP 421 (804)
Q Consensus 343 tp~~vi~~Y~~ltG~p~lpP~walG~~q~rw~Y~~~~~v~~v~~~~-~~~~iP~D~iwlDi~~~~~~~~ft~d~~~FP~p 421 (804)
...++++.-.+..++|.+ .||+|- +...+..++.+. ...++|+.++++|-+| .||.-
T Consensus 25 esi~ilrea~~~f~~~~v--~~SgGK--------DS~VlLhLa~kaf~~~~~~~pvl~VDTG~------------~FpEt 82 (312)
T PRK12563 25 ESIHILREVVAECSKPVM--LYSIGK--------DSVVMLHLAMKAFRPTRPPFPLLHVDTTW------------KFREM 82 (312)
T ss_pred HHHHHHHHHHHhcCCcEE--EecCCh--------HHHHHHHHHHHhhcccCCCeeEEEeCCCC------------CCHHH
Confidence 345677776665566544 677773 344556666553 4458899999999654 58888
Q ss_pred HHHHHHHHH-cCCeEEEEe
Q 003671 422 EEMQRKLAT-KGRHMVTIV 439 (804)
Q Consensus 422 ~~m~~~L~~-~g~k~v~ii 439 (804)
-++.+.+.+ .|+++++..
T Consensus 83 ~efrD~~a~~~gl~Liv~~ 101 (312)
T PRK12563 83 IDFRDRRAKELGLDLVVHH 101 (312)
T ss_pred HHHHHHHHHHhCCcEEEec
Confidence 888888765 588877653
No 83
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=22.94 E-value=1.3e+02 Score=33.42 Aligned_cols=76 Identities=11% Similarity=0.070 Sum_probs=47.1
Q ss_pred ccccccCCCCHHHHHHHHHhhhcCCCCceEEEeeccccCC-CcceeECCCCCCChHHHHHHHHHcCCeEEEEecCccccC
Q 003671 368 YHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDG-KKYFTWDRLSFPHPEEMQRKLATKGRHMVTIVDPHIKRD 446 (804)
Q Consensus 368 ~~q~rw~Y~~~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~-~~~ft~d~~~FP~p~~m~~~L~~~g~k~v~iidP~i~~~ 446 (804)
+|-+|.- .+..+++.+++++.|+-+=.+++-+.+.+- ...|.|. -.-|...+++.-++.|.++++..-|+|..+
T Consensus 16 ~hy~r~p---~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~--g~~dl~~f~~~a~~~gl~vilrpGpyi~aE 90 (319)
T PF01301_consen 16 FHYFRIP---PEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFT--GNRDLDRFLDLAQENGLYVILRPGPYICAE 90 (319)
T ss_dssp E-GGGS----GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---S--GGG-HHHHHHHHHHTT-EEEEEEES---TT
T ss_pred eccccCC---hhHHHHHHHHHHhCCcceEEEeccccccCCCCCccccc--chhhHHHHHHHHHHcCcEEEecccceeccc
Confidence 4444433 556778899999999998888887765432 3345554 235788999999999999999999999876
Q ss_pred CC
Q 003671 447 DS 448 (804)
Q Consensus 447 ~~ 448 (804)
-.
T Consensus 91 ~~ 92 (319)
T PF01301_consen 91 WD 92 (319)
T ss_dssp BG
T ss_pred cc
Confidence 43
No 84
>cd06415 GH25_Cpl1-like Cpl-1 lysin (also known as Cpl-9 lysozyme / muramidase) is a bacterial cell wall endolysin encoded by the pneumococcal bacteriophage Cp-1, which cleaves the glycosidic N-acetylmuramoyl-(beta1,4)-N-acetylglucosamine bonds of the pneumococcal glycan chain, thus acting as an enzymatic antimicrobial agent (an enzybiotic) against streptococcal infections. Cpl-1 belongs to the CP family of lysozymes (CPL lysozymes) which includes the Cpl-7 lysin. Cpl-1 has a glycosyl hydrolase family 25 (GH25) catalytic domain with an irregular (beta/alpha)5-beta3 barrel and a C-terminal cell wall-anchoring module formed by six similar choline-binding repeats (ChBr's). The ChBr's facilitate the anchoring of Cpl-1 to the choline-containing teichoic acid of the pneumococcal cell wall. Other members of this domain family have an N-terminal CHAP (cysteine, histidine-dependent amidohydrolases/peptidases) domain similar to that of the firmicute CHAP lysins and associated with endopeptidase
Probab=22.62 E-value=89 Score=31.84 Aligned_cols=71 Identities=14% Similarity=0.173 Sum_probs=41.9
Q ss_pred ccccccCCCC---HHHHHHHHHhhhcCCCCc-eEEEeeccccCCCcceeECCCCC-CChHHHHHHHHHcCCeEEEEecCc
Q 003671 368 YHQCRWNYRD---EEDVEQVDSKFDEHDIPY-DVLWLDIEHTDGKKYFTWDRLSF-PHPEEMQRKLATKGRHMVTIVDPH 442 (804)
Q Consensus 368 ~~q~rw~Y~~---~~~v~~v~~~~~~~~iP~-D~iwlDi~~~~~~~~ft~d~~~F-P~p~~m~~~L~~~g~k~v~iidP~ 442 (804)
||-++..-.. +++.+-.++..+..++|. +.+++|+|...+. ++..- ...+.|++++++.|++.++...+.
T Consensus 57 Yhf~~~~~~~~~a~~eA~~f~~~~~~~~l~~~~~~~lDvE~~~~~-----~~~~~~~~~~~f~~~v~~~G~~~~iYt~~~ 131 (196)
T cd06415 57 YHFARFGGSVSQAKYEADYFLNSAQQAGLPKGSYLALDYEQGSGN-----SKAANTSAILAFMDTIKDAGYKPMLYSYKP 131 (196)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhhhcCCCCCCEEEEEEecCCCC-----CHHHHHHHHHHHHHHHHHhCCCcEEEecHH
Confidence 6755543211 223344667777777764 5689999965321 11100 113578889998999988776654
Q ss_pred c
Q 003671 443 I 443 (804)
Q Consensus 443 i 443 (804)
.
T Consensus 132 ~ 132 (196)
T cd06415 132 L 132 (196)
T ss_pred H
Confidence 3
No 85
>PF09196 DUF1953: Domain of unknown function (DUF1953); InterPro: IPR015279 This domain is found in the Archaeal protein maltooligosyl trehalose synthase produced by Sulfolobus spp. Its function has not, as yet, been defined. ; PDB: 3HJE_A 1IV8_A.
Probab=22.05 E-value=2e+02 Score=23.44 Aligned_cols=50 Identities=20% Similarity=0.290 Sum_probs=36.0
Q ss_pred eeeecCceeEEeeeccCCeeEEEEeCCCCceEECCCCcEEeCCEEEEEEcCCCCccE
Q 003671 717 AFMVGNALLVQGVYEERAKHISVYLPGKESWYDIRTGARVKGGVTHKLEVSEESVPA 773 (804)
Q Consensus 717 Qfm~G~~lLVaPV~~~g~~~~~vYlP~~g~Wyd~~t~~~~~gg~~~~v~~pl~~iPv 773 (804)
-||-|+.+||. |-++|.-.++.-+-.++.+-|.-|++.+.|.. .++++|.
T Consensus 13 gf~r~~kilvi-iktkgs~n~~~~~e~~~~ytdv~t~e~i~~~v------~i~~lp~ 62 (66)
T PF09196_consen 13 GFIRFNKILVI-IKTKGSVNYKYKIEEGAIYTDVITGEEIKKEV------QINELPR 62 (66)
T ss_dssp EEEETTTEEEE-EES-TTSSCEEEEECCEEEEETTTTEEEECEE------EE-SS-E
T ss_pred eEEecCEEEEE-EecccccceeeeeccCcEEEeeecChheeeeE------eecccch
Confidence 59999999996 45567777888887678999999999887632 2456664
No 86
>PF03597 CcoS: Cytochrome oxidase maturation protein cbb3-type; InterPro: IPR004714 Cytochrome cbb3 oxidases are found almost exclusively in Proteobacteria, and represent a distinctive class of proton-pumping respiratory haem-copper oxidases (HCO) that lack many of the key structural features that contribute to the reaction cycle of the intensely studied mitochondrial cytochrome c oxidase (CcO). Expression of cytochrome cbb3 oxidase allows human pathogens to colonise anoxic tissues and agronomically important diazotrophs to sustain nitrogen fixation []. Genes encoding a cytochrome cbb3 oxidase were initially designated fixNOQP (ccoNOQP), the ccoNOQP operon is always found close to a second gene cluster, known as fixGHIS (ccoGHIS) whose expression is necessary for the assembly of a functional cbb3 oxidase. On the basis of their derived amino acid sequences each of the four proteins encoded by the ccoGHIS operon are thought to be membrane-bound. It has been suggested that they may function in concert as a multi-subunit complex, possibly playing a role in the uptake and metabolism of copper required for the assembly of the binuclear centre of cytochrome cbb3 oxidase.
Probab=22.01 E-value=67 Score=25.03 Aligned_cols=25 Identities=32% Similarity=0.571 Sum_probs=15.5
Q ss_pred chhHHHHHHHHHHHHhccCCceeeccCcccc
Q 003671 6 PATISLSLILLAFLTYQAPPVLSWKKDEFRN 36 (804)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fk~ 36 (804)
|.+++++++.+++++| |++...|-.
T Consensus 8 p~sl~l~~~~l~~f~W------avk~GQfdD 32 (45)
T PF03597_consen 8 PVSLILGLIALAAFLW------AVKSGQFDD 32 (45)
T ss_pred HHHHHHHHHHHHHHHH------HHccCCCCC
Confidence 4455555556666654 788777754
No 87
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=21.66 E-value=1.2e+02 Score=29.99 Aligned_cols=45 Identities=20% Similarity=0.280 Sum_probs=30.3
Q ss_pred eEEEeeccccC----CCcceeECCC----CCCChHHHHHHHHHcCCeEEEEec
Q 003671 396 DVLWLDIEHTD----GKKYFTWDRL----SFPHPEEMQRKLATKGRHMVTIVD 440 (804)
Q Consensus 396 D~iwlDi~~~~----~~~~ft~d~~----~FP~p~~m~~~L~~~g~k~v~iid 440 (804)
-.+.+|.|.+= ....+--+++ -||+-.++++.|+++|++++++.+
T Consensus 14 k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN 66 (166)
T TIGR01664 14 KVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTN 66 (166)
T ss_pred cEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeC
Confidence 45677888751 1111211222 368999999999999999998765
No 88
>PRK12568 glycogen branching enzyme; Provisional
Probab=21.61 E-value=99 Score=38.21 Aligned_cols=95 Identities=11% Similarity=0.045 Sum_probs=49.9
Q ss_pred eeECCCCCCCh---HHHHHHHHHcCCeEEEEecC-ccccCCC-hhhhHHHHHcCceE-EcCCCCCeeeeecCCCcccccC
Q 003671 411 FTWDRLSFPHP---EEMQRKLATKGRHMVTIVDP-HIKRDDS-YWLHNEATEKGYYV-KDATKRDYDGWCWPGSSSYLDM 484 (804)
Q Consensus 411 ft~d~~~FP~p---~~m~~~L~~~g~k~v~iidP-~i~~~~~-y~~~~~~~~~~~~v-k~~~g~~~~g~~WpG~~~~~Df 484 (804)
|.-++ +|..+ ++||+.+|++|+++|+=+-| |...+.. ...|+. ..++- .++.... ...|. +..+|+
T Consensus 309 ~a~~~-~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~~l~~fdg---~~~Ye~~d~~~g~--~~~W~--~~~~N~ 380 (730)
T PRK12568 309 YAPTA-RHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHGLAQFDG---AALYEHADPREGM--HRDWN--TLIYNY 380 (730)
T ss_pred CccCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccccCCccccccccCCC---ccccccCCCcCCc--cCCCC--Ceeccc
Confidence 44433 56655 68899999999999986555 4443321 000100 00110 0111001 12342 235799
Q ss_pred CCHhHHHHHHhhcccccccCCCCcceEeecC
Q 003671 485 LNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 485 tnp~a~~ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
.||+++++..+...+. ....++||+=.|.
T Consensus 381 ~~peVr~~li~~a~~W--l~eyhIDG~R~DA 409 (730)
T PRK12568 381 GRPEVTAYLLGSALEW--IEHYHLDGLRVDA 409 (730)
T ss_pred CCHHHHHHHHHHHHHH--HHHhCceEEEEcC
Confidence 9999998776654421 1123477777774
No 89
>PRK14705 glycogen branching enzyme; Provisional
Probab=20.97 E-value=1.3e+02 Score=39.30 Aligned_cols=124 Identities=16% Similarity=0.102 Sum_probs=62.0
Q ss_pred HHHHHhhhcCCCCceEEEeec--cc----cCC---CcceeECCCCCCCh---HHHHHHHHHcCCeEEEEecC-ccccCCC
Q 003671 382 EQVDSKFDEHDIPYDVLWLDI--EH----TDG---KKYFTWDRLSFPHP---EEMQRKLATKGRHMVTIVDP-HIKRDDS 448 (804)
Q Consensus 382 ~~v~~~~~~~~iP~D~iwlDi--~~----~~~---~~~ft~d~~~FP~p---~~m~~~L~~~g~k~v~iidP-~i~~~~~ 448 (804)
.+++.-+++.|+ .+|||=- ++ .-| ..+|..+ .+|-.+ +.||+.+|++|+++|+=+-| |...+..
T Consensus 769 ~~lldYlk~LGv--t~IeLmPv~e~p~~~swGY~~~~y~ap~-~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~~ 845 (1224)
T PRK14705 769 KELVDYVKWLGF--THVEFMPVAEHPFGGSWGYQVTSYFAPT-SRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDSW 845 (1224)
T ss_pred HHHHHHHHHhCC--CEEEECccccCCCCCCCCCCccccCCcC-cccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcchh
Confidence 345566666665 6777631 11 112 1234444 357655 68899999999999985555 4443321
Q ss_pred hhhhHHHHHcCceEEcCCCCCeeeeecCCCcccccCCCHhHHHHHHhhcccccccCCCCcceEeecC
Q 003671 449 YWLHNEATEKGYYVKDATKRDYDGWCWPGSSSYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDM 515 (804)
Q Consensus 449 y~~~~~~~~~~~~vk~~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~Dm 515 (804)
+....+...+-...+...-....|.. ..+||.+|+++++..+...+. .....+||+=.|.
T Consensus 846 ---~l~~fdg~~~y~~~d~~~g~~~~Wg~--~~fn~~~~eVr~fli~~a~~W--l~eyhiDGfR~Da 905 (1224)
T PRK14705 846 ---ALAQFDGQPLYEHADPALGEHPDWGT--LIFDFGRTEVRNFLVANALYW--LDEFHIDGLRVDA 905 (1224)
T ss_pred ---hhhhcCCCcccccCCcccCCCCCCCC--ceecCCCHHHHHHHHHHHHHH--HHHhCCCcEEEee
Confidence 11111110000111111001123532 358999999998776554321 1112355665554
No 90
>PF14885 GHL15: Hypothetical glycosyl hydrolase family 15
Probab=20.84 E-value=79 Score=27.68 Aligned_cols=57 Identities=19% Similarity=0.392 Sum_probs=38.5
Q ss_pred HHcCceEEcCCCCCeeeeecCCCc---ccccCCCHhHHHHHHhhcccccccCCCCcceEeecCC
Q 003671 456 TEKGYYVKDATKRDYDGWCWPGSS---SYLDMLNPEIRTWWGTKFSYENYVGSTPSLYIWNDMN 516 (804)
Q Consensus 456 ~~~~~~vk~~~g~~~~g~~WpG~~---~~~Dftnp~a~~ww~~~~~~~~~~g~~~~~~~W~Dmn 516 (804)
.....|.++.+|+.. + -|+|.. -..+..+|..|.||.+.+... .. ....||+..|.+
T Consensus 17 ~~~~w~a~~~~g~~i-~-~W~~~~~~~~~~~~~~~~~r~~w~~~v~e~-~~-~s~~DGv~~Dn~ 76 (79)
T PF14885_consen 17 PRADWFAKTANGSRI-S-EWPGYPGHYQMYVWSCPDYRRYWVDAVVEE-LQ-NSPWDGVFADND 76 (79)
T ss_pred cCchhhccccCccce-e-ecCCCCceeeeccCCcchHHHHHHHHHHHH-Hh-cCccceeeeecc
Confidence 345678888888766 3 377753 235666699999999887532 22 246888888864
No 91
>PF07485 DUF1529: Domain of Unknown Function (DUF1259); InterPro: IPR011094 This family is the lppY/lpqO homologue family. They are related to 'probable conserved lipoproteins' LppY and LpqO from Mycobacterium bovis.
Probab=20.59 E-value=2.5e+02 Score=26.79 Aligned_cols=51 Identities=20% Similarity=0.259 Sum_probs=34.3
Q ss_pred HHHHHHHHHhhhcCCCCceEEEeeccccCCCc-ceeECCCCCCChHHHHHHHHH
Q 003671 378 EEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKK-YFTWDRLSFPHPEEMQRKLAT 430 (804)
Q Consensus 378 ~~~v~~v~~~~~~~~iP~D~iwlDi~~~~~~~-~ft~d~~~FP~p~~m~~~L~~ 430 (804)
++||..|++.++++||.+-+++.-+=+.+-+- |.-|- .=-||.++.+.+++
T Consensus 67 ~~EV~pvi~aL~~~GI~vtAlHNH~l~e~Prl~ymH~~--~~gdp~~lA~~vr~ 118 (123)
T PF07485_consen 67 EDEVNPVISALRKNGIEVTALHNHWLFEQPRLFYMHIW--GVGDPAKLARKVRA 118 (123)
T ss_pred HHHHHHHHHHHHHCCceEEEEecccccCCCCEEEEEEE--ecCCHHHHHHHHHH
Confidence 88999999999999999999985432222221 11221 12378888887765
No 92
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=20.35 E-value=57 Score=29.56 Aligned_cols=18 Identities=39% Similarity=0.565 Sum_probs=9.1
Q ss_pred CCCCCchhHHHHHHHHHHHH
Q 003671 1 MTSRSPATISLSLILLAFLT 20 (804)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (804)
|+|.. .++|+|+|.++|+
T Consensus 1 MaSK~--~llL~l~LA~lLl 18 (95)
T PF07172_consen 1 MASKA--FLLLGLLLAALLL 18 (95)
T ss_pred CchhH--HHHHHHHHHHHHH
Confidence 77554 4445555444444
Done!