Query 003672
Match_columns 804
No_of_seqs 657 out of 2906
Neff 9.5
Searched_HMMs 29240
Date Tue Mar 26 17:59:47 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003672.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1722-1726//hhsearch_pdb/003672hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4etp_A Kinesin-like protein KA 1.0 1 1 636.4 36.1 375 402-788 20-402 (403)
2 3u06_A Protein claret segregat 1.0 1 1 629.1 30.3 366 405-796 23-395 (412)
3 2rep_A Kinesin-like protein KI 1.0 1 1 607.1 27.4 344 429-783 10-376 (376)
4 3cob_A Kinesin heavy chain-lik 1.0 1 1 603.5 26.6 336 437-793 1-337 (369)
5 4h1g_A Maltose binding protein 1.0 1 1 601.1 29.9 345 424-785 357-713 (715)
6 3t0q_A AGR253WP; kinesin, alph 1.0 1 1 601.1 27.6 340 438-787 2-348 (349)
7 2y65_A Kinesin, kinesin heavy 1.0 1 1 599.3 21.9 334 438-793 8-343 (365)
8 3b6u_A Kinesin-like protein KI 1.0 1 1 597.6 22.5 340 435-794 15-364 (372)
9 1f9v_A Kinesin-like protein KA 1.0 1 1 594.4 26.2 337 439-787 1-345 (347)
10 3bfn_A Kinesin-like protein KI 1.0 1 1 593.6 21.4 336 434-792 14-356 (388)
No 1
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=636.44 Aligned_cols=375 Identities=44% Similarity=0.679 Sum_probs=316.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCCCCEEECCCCCCCCCCCEEE
Q ss_conf 999999999999999999865898998754211111001454101322699999-9999985047527986567753023
Q 003672 402 EEKQRVAQELQERLAEAEHQLIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPD-DGVGADASIISYPTSLESQGRGIDL 480 (804)
Q Consensus 402 e~l~~~l~~l~~~~~~l~~~l~~~~~~~~~l~~~i~~Lk~~i~~~~r~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~i~~ 480 (804)
..+...+..+...+.++...+...+..++++++++.+++++|+|+||+||.... +........+..++.. .....+.+
T Consensus 20 ~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkgnIrV~vRvRP~~~~~e~~~~~~~~v~~~~~~-~~~~~~~~ 98 (403)
T 4etp_A 20 AALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRGNIRVYLRIRPALKNLENSDTSLINVNEFDDN-SGVQSMEV 98 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCTTTSCSCCTTEEECCCBTT-TTBEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCC-CCCEEEEE
T ss_conf 99999999999999999999999999999999899971898699999088997634467870687403677-88437998
Q ss_pred E---CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHH
Q ss_conf 0---3894234760510489987367999879999995457772587422578776235246999765777507889999
Q 003672 481 I---QNGQKFPFTFDKVFNHEASQQDVFLEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPEAQEHKGLIPRSLEQI 557 (804)
Q Consensus 481 ~---~~~~~~~f~fd~vf~~~~~q~~v~~~~~~lv~~~~~G~n~~i~~yG~t~sGKt~tl~G~~~~~~~~Gli~r~~~~l 557 (804)
. .....+.|.||+||+++++|.+||..+.|+|+++++|||+||||||||||||||||+|+. +|||||++++|
T Consensus 99 ~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~~-----~Giipr~~~~l 173 (403)
T 4etp_A 99 TKIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNPG-----DGIIPSTISHI 173 (403)
T ss_dssp EECSSSCEEEEEEESEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEEEESCTTSSHHHHHHCTT-----TSHHHHHHHHH
T ss_pred ECCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCC-----CCCCHHHHHHH
T ss_conf 2678876756877688979988658999999999999858961699997779999836747999-----86321479999
Q ss_pred HHHHHHHHHCCCEEEEEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECC-CCCEEECCCEEEECCCHHH
Q ss_conf 986566342381899999875445005653007877899877655689999750487689-9985860457999699999
Q 003672 558 FQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDA-NGNTHVSDLTIVDVCSISE 636 (804)
Q Consensus 558 f~~~~~~~~~~~~~~v~~S~~ei~~e~i~DLL~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~v~s~~e 636 (804)
|..+......+|.|.|.+||+|||||.|+|||.+..... ........+.+++++ .+++++.|++++.|.+.++
T Consensus 174 F~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~------~~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e 247 (403)
T 4etp_A 174 FNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNK------EDTSIGLKHEIRHDQETKTTTITNVTSVKLESEEM 247 (403)
T ss_dssp HHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC--------------CCSCCCCEEEETTTTEEEETTCCCEECCCHHH
T ss_pred HHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCCC------CCCCCCCCEEEEEECCCCCEEECCCEEEEECCHHH
T ss_conf 988876403683489999999983661468567766554------44566765036870799978836817999199999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999999840433446576457896018999997440665432310688883688754546778741037758999969
Q 003672 637 ISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSL 716 (804)
Q Consensus 637 ~~~~l~~~~~~r~~~~~~~~~~ssrsH~i~~l~i~~~~~~~~~~~~~~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl 716 (804)
+..+|..|..+|.++.|.+|..|||||+||+|+|.+.+........|+|+|||||||||..++++.|.+++|+..||+||
T Consensus 248 ~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL 327 (403)
T 4etp_A 248 VEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSL 327 (403)
T ss_dssp HHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999973443445477656776427999999860688976689999997999864445677048899999987889
Q ss_pred HHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999999998502899---987678843224455679995079999837999996875999997878310435888
Q 003672 717 SSLSDVIFALAKKED---HIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVP 788 (804)
Q Consensus 717 ~~L~~vi~~l~~~~~---~~p~r~s~LT~lL~~~lgg~~~t~~i~~isp~~~~~~etl~tL~~a~r~~~~~~~~~ 788 (804)
++|++||.+|+.+.. |||||+||||+||+|+|||||+|+||+||||.+.+++||++||+||+|++.|++++-
T Consensus 328 ~aLg~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 328 SALGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp HHHHHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999861468998677456668898798628996499999937963348999999999999710526789
No 2
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=1.00 E-value=1 Score=629.09 Aligned_cols=366 Identities=43% Similarity=0.681 Sum_probs=313.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEC--
Q ss_conf 999999999999999865898998754211111001454101322699999999998504752798656775302303--
Q 003672 405 QRVAQELQERLAEAEHQLIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGVGADASIISYPTSLESQGRGIDLIQ-- 482 (804)
Q Consensus 405 ~~~l~~l~~~~~~l~~~l~~~~~~~~~l~~~i~~Lk~~i~~~~r~~~~~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~-- 482 (804)
...+..+...+..+.+++...+..++++++.+.+++++|+++||+||+.+.|...+.. .+.+++... +.+..
T Consensus 23 ~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gnIrV~vRvRP~~~~E~~~~~~-~~~~~~~~~-----v~~~~~~ 96 (412)
T 3u06_A 23 LRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDNIRVFCRIRPPLESEENRMCC-TWTYHDEST-----VELQSID 96 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEECCCCGGGTTSCBC-EEEEEETTE-----EEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCE-EEEECCCCE-----EEEECCC
T ss_conf 9999999999999999999999999998878887179979999848998100267612-899369987-----9980578
Q ss_pred -----CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHH
Q ss_conf -----894234760510489987367999879999995457772587422578776235246999765777507889999
Q 003672 483 -----NGQKFPFTFDKVFNHEASQQDVFLEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPEAQEHKGLIPRSLEQI 557 (804)
Q Consensus 483 -----~~~~~~f~fd~vf~~~~~q~~v~~~~~~lv~~~~~G~n~~i~~yG~t~sGKt~tl~G~~~~~~~~Gli~r~~~~l 557 (804)
....+.|.||+||+++++|.+||..+.|+|+++++|||+||||||||||||||||+|.+ +.+|||||++++|
T Consensus 97 ~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~---~~~Giipr~~~~l 173 (412)
T 3u06_A 97 AQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVP---ESVGVIPRTVDLL 173 (412)
T ss_dssp -------CCCEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCCEEEEEESSTTSSHHHHHTEET---TEECHHHHHHHHH
T ss_pred CCCCCCCCCEEEEECEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCC---CCCCCHHHHHHHH
T ss_conf 5445666863776086818999788999999999999977974479974589999716736778---8786678999999
Q ss_pred HHHHHHHHHCCCEEEEEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHH
Q ss_conf 98656634238189999987544500565300787789987765568999975048768999858604579996999999
Q 003672 558 FQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEI 637 (804)
Q Consensus 558 f~~~~~~~~~~~~~~v~~S~~ei~~e~i~DLL~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~s~~e~ 637 (804)
|..+......+|.|.|.+||+|||||.|+|||.+... ...+.+.+++.++++|.|++++.|.+.+++
T Consensus 174 F~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-------------~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~ 240 (412)
T 3u06_A 174 FDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQK-------------DMEIRMAKNNKNDIYVSNITEETVLDPNHL 240 (412)
T ss_dssp HHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSCC-------------CCCEEECSSCTTSEEETTCCCEECCSHHHH
T ss_pred HHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCCC-------------CCEEEEEECCCCCEEECCEEEEEECCHHHH
T ss_conf 9865342036834887778999967745786788788-------------863553035899889736079994999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999998404334465764578960189999974406654323106888836887545467787410377589999699
Q 003672 638 SSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLS 717 (804)
Q Consensus 638 ~~~l~~~~~~r~~~~~~~~~~ssrsH~i~~l~i~~~~~~~~~~~~~~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~ 717 (804)
..+|..|..+|.++.|.+|..|||||+||+|+|.+.+........|+|+||||||||+.. .+.+++|+..||+||+
T Consensus 241 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~ 316 (412)
T 3u06_A 241 RHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLS 316 (412)
T ss_dssp HHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETTTTEEEEEEEEEEECCCCCC--------------CTTTHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCC----CCCHHHHHHHHHHHHH
T ss_conf 999999974354234679887767329999999997078897888999999899777677----6630476887758899
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 9999999850289998767884322445567999507999983799999687599999787831043588864443222
Q 003672 718 SLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKA 796 (804)
Q Consensus 718 ~L~~vi~~l~~~~~~~p~r~s~LT~lL~~~lgg~~~t~~i~~isp~~~~~~etl~tL~~a~r~~~~~~~~~~~~~~~~~ 796 (804)
+|++||.+|+.+..|||||+||||+||+|+|||||+|+||+||||...+++||++||+||+|++.|++++.+++...+.
T Consensus 317 aLg~vI~aL~~~~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~~~~n~~~~~ 395 (412)
T 3u06_A 317 ELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLNN 395 (412)
T ss_dssp HHHHHHHHHHTTCSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC-----------
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 9999999986358888732437889889861899669999994897334899999999999974324666622335777
No 3
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=607.13 Aligned_cols=344 Identities=50% Similarity=0.746 Sum_probs=302.2
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC---CCCCCCEEEEC-------------CCCEEEEEEC
Q ss_conf 7542111110014541013226999999999985047527986---56775302303-------------8942347605
Q 003672 429 RKKLHNTILELKGNIRVFCRVRPLLPDDGVGADASIISYPTSL---ESQGRGIDLIQ-------------NGQKFPFTFD 492 (804)
Q Consensus 429 ~~~l~~~i~~Lk~~i~~~~r~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~i~~~~-------------~~~~~~f~fd 492 (804)
..++++++.+++++|++++|+||+.+.|...+.. .+.++.+. ......+.+.. ..+.+.|.||
T Consensus 10 ~~~~hn~~~~~~~~irV~vRvRP~~~~E~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD 88 (376)
T 2rep_A 10 HSSGLVPRGSLKGNIRVFCRVRPVLPGEPTPPPG-LLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFD 88 (376)
T ss_dssp -------------CEEEEEEECCCCTTSCCCCGG-GSBCCC------CCCCEEECCC-----------------CEEECS
T ss_pred CCCCCCHHHCCCCCEEEEEECCCCCHHHCCCCCC-EEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 3212321122689839999919789355056985-499816766656788579994477654322566677874566524
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 10489987367999879999995457772587422578776235246999-76577750788999998656634238189
Q 003672 493 KVFNHEASQQDVFLEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPE-AQEHKGLIPRSLEQIFQTSQFLLVQGWKF 571 (804)
Q Consensus 493 ~vf~~~~~q~~v~~~~~~lv~~~~~G~n~~i~~yG~t~sGKt~tl~G~~~-~~~~~Gli~r~~~~lf~~~~~~~~~~~~~ 571 (804)
+||+++++|++||..+.|+|+++++|||+||||||||||||||||+|++. .++.+|||||++++||..+......+|.|
T Consensus 89 ~Vf~~~~~Q~~Vy~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~ 168 (376)
T 2rep_A 89 RVFPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTY 168 (376)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 78488655002345477788874389754999767899987068666888886658807999999999999744477289
Q ss_pred EEEEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEC--CCCCEEECCCEEEECCCHHHHHHHHHHHHHCCC
Q ss_conf 999987544500565300787789987765568999975048768--999858604579996999999999999984043
Q 003672 572 KMQASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIKHD--ANGNTHVSDLTIVDVCSISEISSLLRQAAQSRS 649 (804)
Q Consensus 572 ~v~~S~~ei~~e~i~DLL~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~ 649 (804)
.|.+||+|||||+|+|||.+.... .....+.++++ +.+++++.|++++.|.+++++..+|..|..+|.
T Consensus 169 ~v~vS~~EIYnE~i~DLL~~~~~~----------~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~ 238 (376)
T 2rep_A 169 SFVASYVEIYNETVRDLLATGTRK----------GQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRA 238 (376)
T ss_dssp EEEEEEEEEETTEEEETTCCC------------------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCEEEECCCCCCCC----------CCCCCCEEEECCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCC
T ss_conf 999999999888866724442223----------5677723775237889879779679994789999999999974366
Q ss_pred CCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 344657645789601899999744066543231068888368875454677874----1037758999969999999998
Q 003672 650 VGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVIFA 725 (804)
Q Consensus 650 ~~~~~~~~~ssrsH~i~~l~i~~~~~~~~~~~~~~l~~vDLagse~~~~~~~~~----~~~~e~~~in~sl~~L~~vi~~ 725 (804)
++.|.+|..|||||+||+|+|.+.+........|+|+|||||||||..++++.| .+++|+..||+||++|++||.+
T Consensus 239 ~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~a 318 (376)
T 2rep_A 239 VARTAQNERSSRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMA 318 (376)
T ss_dssp HCC-----CGGGSEEEEEEEEEEEESSSCCEEEEEEEEEECCCCC------------------------CHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 62244788777754999999998836989677767899978877535655666765421236776760889999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 5028999876788432244556799950799998379999968759999978783104
Q 003672 726 LAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNAC 783 (804)
Q Consensus 726 l~~~~~~~p~r~s~LT~lL~~~lgg~~~t~~i~~isp~~~~~~etl~tL~~a~r~~~~ 783 (804)
|+.+..|||||+||||+||+|+|||||+|+||+||||...+++||++||+||+|++.|
T Consensus 319 L~~~~~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 319 LSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp HHTTCSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 8558983577578889998986189870999999698522399999999999997429
No 4
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=603.49 Aligned_cols=336 Identities=40% Similarity=0.669 Sum_probs=301.0
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEE-ECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 10014541013226999999999985047527986567753023-03894234760510489987367999879999995
Q 003672 437 LELKGNIRVFCRVRPLLPDDGVGADASIISYPTSLESQGRGIDL-IQNGQKFPFTFDKVFNHEASQQDVFLEISQLVQSA 515 (804)
Q Consensus 437 ~~Lk~~i~~~~r~~~~~~~e~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~f~fd~vf~~~~~q~~v~~~~~~lv~~~ 515 (804)
++++++|++++|+||+...|...+....+..++.. .+.. ...+..+.|.||+||+++++|.+||..+.|+|+++
T Consensus 1 ee~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~lv~~~ 75 (369)
T 3cob_A 1 EDMKGKIRVYCRLRPLCEKEIIAKERNAIRSVDEF-----TVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSA 75 (369)
T ss_dssp ---CCBCEEEEEECCCCHHHHHTTCCBCEEECSSS-----EEEEECTTSCEEEEECSEEECTTCCHHHHHHTTTHHHHHH
T ss_pred CCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCCE-----EEEECCCCCCCEEEECCEEECCCCCCCEEHHHHHHHHHHH
T ss_conf 98899849999879998345467983799769967-----9993378998268865989899997314022131325766
Q ss_pred HCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHCCCCCCC
Q ss_conf 45777258742257877623524699976577750788999998656634238189999987544500565300787789
Q 003672 516 LDGYKVCIFAYGQTGSGKTYTMMGKPEAQEHKGLIPRSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAG 595 (804)
Q Consensus 516 ~~G~n~~i~~yG~t~sGKt~tl~G~~~~~~~~Gli~r~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~i~DLL~~~~~~ 595 (804)
++|||+||||||||||||||||+|++ .++|||||++.+||..+... ...+.|.|.+||+|||||.|+|||.+...
T Consensus 76 l~G~n~tifAYGqTGSGKTyTM~G~~---~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~~- 150 (369)
T 3cob_A 76 VDGYNVCIFAYGQTGSGKTFTIYGAD---SNPGLTPRAMSELFRIMKKD-SNKFSFSLKAYMVELYQDTLVDLLLPKQA- 150 (369)
T ss_dssp HTTCEEEEEEEECTTSSHHHHHTBCS---SSBCHHHHHHHHHHHHHHHT-TTTEEEEEEEEEEEECSSCEEESSCCSSS-
T ss_pred HCCCCEEEEEECCCCCCCEEEECCCC---CCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEEEEEEECCEEEECCCCCCC-
T ss_conf 46971599987899998837511799---88862589999999998741-35752677899987707632345787556-
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEC
Q ss_conf 98776556899997504876899985860457999699999999999998404334465764578960189999974406
Q 003672 596 GSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNE 675 (804)
Q Consensus 596 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsH~i~~l~i~~~~~ 675 (804)
....+.|++++.+++++.|++++.|.+++++..+|..|..+|.++.|.+|..|||||+||+|+|.+.+.
T Consensus 151 -----------~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~ 219 (369)
T 3cob_A 151 -----------KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNL 219 (369)
T ss_dssp -----------CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEET
T ss_pred -----------CCCCEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECC
T ss_conf -----------776427899799988805987998089999999999875255230344778777633899999998527
Q ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 65432310688883688754546778741037758999969999999998502899987678843224455679995079
Q 003672 676 ATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTL 755 (804)
Q Consensus 676 ~~~~~~~~~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~~p~r~s~LT~lL~~~lgg~~~t~ 755 (804)
.......|+|+|||||||||..++++.|.+++|+..||+||++|++||.+|+.+..|||||+||||+||+|+|||||+|+
T Consensus 220 ~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~ 299 (369)
T 3cob_A 220 QTQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTL 299 (369)
T ss_dssp TTCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEE
T ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEE
T ss_conf 87727888999996887875443476302347787877889999999999864899678747777887887628985279
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99983799999687599999787831043588864443
Q 003672 756 MFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLT 793 (804)
Q Consensus 756 ~i~~isp~~~~~~etl~tL~~a~r~~~~~~~~~~~~~~ 793 (804)
||+||||...+++||++||+||+|++.|++.|..+...
T Consensus 300 mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~ 337 (369)
T 3cob_A 300 MFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS 337 (369)
T ss_dssp EEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 99994772002899999999999986545677415788
No 5
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=1.00 E-value=1 Score=601.12 Aligned_cols=345 Identities=47% Similarity=0.719 Sum_probs=302.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCC----CCCCCCCC-CCCCCEEECCCCCCC-CCCCEEEEC----CCCEEEEEECC
Q ss_conf 989987542111110014541013226----99999999-998504752798656-775302303----89423476051
Q 003672 424 EGEKLRKKLHNTILELKGNIRVFCRVR----PLLPDDGV-GADASIISYPTSLES-QGRGIDLIQ----NGQKFPFTFDK 493 (804)
Q Consensus 424 ~~~~~~~~l~~~i~~Lk~~i~~~~r~~----~~~~~e~~-~~~~~~~~~~~~~~~-~~~~i~~~~----~~~~~~f~fd~ 493 (804)
..+..++.+..++..+.++++|+||+| |.+..+.. +.....+-.|.+... ....|.+.. ....++|.||+
T Consensus 357 tpeeAL~~Aq~~~~~il~~~rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fd~ 436 (715)
T 4h1g_A 357 TVDAALAAAQTNAAALKGNIRVFCRIRNVSSSSSSSSSSSSEDIIQYEAPQDINDESKQELVITRNINNNFSNLRFLFDK 436 (715)
T ss_dssp CHHHHHHHHHHHHSSSSCSEEEEEEECCCC-------------BCEEECCC-------CEEEEEEEETTEEEEEEEECSE
T ss_pred CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECE
T ss_conf 99999999999999997558699997314333221112223331112698888889987599807999998870897451
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 04899873679998799999954577725874225787762352469997657775078899999865663423818999
Q 003672 494 VFNHEASQQDVFLEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPEAQEHKGLIPRSLEQIFQTSQFLLVQGWKFKM 573 (804)
Q Consensus 494 vf~~~~~q~~v~~~~~~lv~~~~~G~n~~i~~yG~t~sGKt~tl~G~~~~~~~~Gli~r~~~~lf~~~~~~~~~~~~~~v 573 (804)
||+++++|++||..+.|+|+++++|||+||||||||||||||||+|+ .+|||||++++||..+......++.|.|
T Consensus 437 vf~~~~~q~~v~~~~~~~v~~~~~G~n~~i~ayGqtgsGKT~Tm~g~-----~~Giipr~~~~lf~~~~~~~~~~~~~~v 511 (715)
T 4h1g_A 437 IFEREQSNDLVFEELSQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHP-----TNGMIPLSLKKIFNDIEELKEKGWSYTV 511 (715)
T ss_dssp EECSSCCHHHHGGGTHHHHHHHHTTCCEEEEEESSTTSSHHHHHHCT-----TTSHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred EECCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCC-----CCCCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 72999999999999999999996896699980088999550036899-----9994999999999998875337945999
Q ss_pred EEEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE-ECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 99875445005653007877899877655689999750487-68999858604579996999999999999984043344
Q 003672 574 QASMLEIYNETIRDLLSTSRAGGSDLTRTENGVPGKQYAIK-HDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGK 652 (804)
Q Consensus 574 ~~S~~ei~~e~i~DLL~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~ 652 (804)
.+||+|||||+|+|||.+... +...+.++ ++..|+++|.|++++.|.|.+++..+|..|..+|.++.
T Consensus 512 ~~s~~Eiyne~i~DLl~~~~~------------~~~~~~~~~~~~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~ 579 (715)
T 4h1g_A 512 RGKFIEIYNEAIVDLLNPKID------------PNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAA 579 (715)
T ss_dssp EEEEEEEETTEEEESSSCCCC------------TTCCCCEEEETTTTEEEETTCCCEECSCHHHHHHHHHHHHCC-----
T ss_pred EEEEEEEECCEEEECCCCCCC------------CCCCCEEEEECCCCCEEEECCEEEECCCHHHHHHHHHHHHHCCCCCC
T ss_conf 999999989998999899988------------88762468866999989818889985999999999999874067155
Q ss_pred CCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CC
Q ss_conf 65764578960189999974406654323106888836887545467787410377589999699999999985028-99
Q 003672 653 TQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKK-ED 731 (804)
Q Consensus 653 ~~~~~~ssrsH~i~~l~i~~~~~~~~~~~~~~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~ 731 (804)
|.+|..|||||+||+|+|.+.+........|+|+|||||||||..++++.+.|++|+..||+||++|++||.+|+.+ ..
T Consensus 580 t~~n~~ssRSH~i~~i~~~~~~~~~~~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~vi~al~~~~~~ 659 (715)
T 4h1g_A 580 TKSNDHSSRSHSIFIIDLQGYNSLTKESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNLKDGS 659 (715)
T ss_dssp -----CGGGSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHCSCC
T ss_pred CCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 65657635661999999999955988776899999918986302314780188999999888899999999998656989
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 987678843224455679995079999837999996875999997878310435
Q 003672 732 HIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEI 785 (804)
Q Consensus 732 ~~p~r~s~LT~lL~~~lgg~~~t~~i~~isp~~~~~~etl~tL~~a~r~~~~~~ 785 (804)
|||||+||||+||+|+|||||+|+||+||||...+++||++||+||+|++.|++
T Consensus 660 ~vpyR~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~~ 713 (715)
T 4h1g_A 660 HVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNNTRI 713 (715)
T ss_dssp CCCGGGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC---
T ss_pred CCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 188745988997775368874499999979775669999999999998422612
No 6
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=1.00 E-value=1 Score=601.09 Aligned_cols=340 Identities=46% Similarity=0.732 Sum_probs=297.7
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEC---CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 001454101322699999999998504752798656775302303---89423476051048998736799987999999
Q 003672 438 ELKGNIRVFCRVRPLLPDDGVGADASIISYPTSLESQGRGIDLIQ---NGQKFPFTFDKVFNHEASQQDVFLEISQLVQS 514 (804)
Q Consensus 438 ~Lk~~i~~~~r~~~~~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~f~fd~vf~~~~~q~~v~~~~~~lv~~ 514 (804)
+|+++|+++||+||+...|...+....+..+.... ....+.+.. ....+.|.||+||+++++|++||.++.|+|++
T Consensus 2 ~lkgnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vf~~v~~lv~~ 80 (349)
T 3t0q_A 2 ALRGNIRVYCRVRPPLLNEPQDMSHILIEKFNEAK-GAQSLTINRNEGRILSYNFQFDMIFEPSHTNKEIFEEIRQLVQS 80 (349)
T ss_dssp ---CEEEEEEEECCCCTTSCCCCTTEEECCCBC---CBEEEEEEECC--CEEEEEEESEEECTTCCHHHHHHHHHHHHHG
T ss_pred CCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCC-CCEEEEECCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHH
T ss_conf 98998389999697995522368637886126778-84389984788864414665687979876688999999999999
Q ss_pred HHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHCCCCCC
Q ss_conf 54577725874225787762352469997657775078899999865663423818999998754450056530078778
Q 003672 515 ALDGYKVCIFAYGQTGSGKTYTMMGKPEAQEHKGLIPRSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRA 594 (804)
Q Consensus 515 ~~~G~n~~i~~yG~t~sGKt~tl~G~~~~~~~~Gli~r~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~i~DLL~~~~~ 594 (804)
+++|||+||||||||||||||||+|+. .|||||++++||..+......+|.|.|.+||+|||||.|+|||.+...
T Consensus 81 ~l~G~n~tifAYGqTGSGKTyTm~g~~-----~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~ 155 (349)
T 3t0q_A 81 SLDGYNVCIFAYGQTGSGKTYTMLNAG-----DGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKS 155 (349)
T ss_dssp GGTTCEEEEEEECSTTSSHHHHHHSTT-----TSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC----
T ss_pred HHCCCCEEEEEECCCCCCCCEEECCCC-----CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHCCCCCCCC
T ss_conf 977952368886789999963758998-----844667999999999875504852689999999975601102356454
Q ss_pred CCCCCCCCCCCCCCCCCEEEECC-CCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 99877655689999750487689-99858604579996999999999999984043344657645789601899999744
Q 003672 595 GGSDLTRTENGVPGKQYAIKHDA-NGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGV 673 (804)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsH~i~~l~i~~~ 673 (804)
... .........+.+++++ .+++++.|++++.|.+++++..+|..|..+|.++.|.+|..|||||+||+|+|.+.
T Consensus 156 ~~~----~~~~~~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~ 231 (349)
T 3t0q_A 156 HDN----IDEILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGR 231 (349)
T ss_dssp ---------------CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEE
T ss_pred CCC----CCCCCCCCCCEEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 454----2223566664058966989889719879994899999999999997376023456454677525899999977
Q ss_pred ECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCCCC
Q ss_conf 066543231068888368875454677874103775899996999999999850289---99876788432244556799
Q 003672 674 NEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKE---DHIPYRNSKLTYLLQPCLGR 750 (804)
Q Consensus 674 ~~~~~~~~~~~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~---~~~p~r~s~LT~lL~~~lgg 750 (804)
+........|+|+|||||||||..++++.|.+++|+..||+||++|++||.+|+.+. .|||||+||||+||+|+|||
T Consensus 232 ~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgG 311 (349)
T 3t0q_A 232 NLHTGETSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVG 311 (349)
T ss_dssp ETTTCCEEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSST
T ss_pred ECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 35889865799999948998754445675310055776517499999999998553688885777478888988986389
Q ss_pred CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9507999983799999687599999787831043588
Q 003672 751 DSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGV 787 (804)
Q Consensus 751 ~~~t~~i~~isp~~~~~~etl~tL~~a~r~~~~~~~~ 787 (804)
||+|+||+||||.+.+++||++||+||+|++.|++++
T Consensus 312 nskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 312 DSKTLMFVNIPPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp TCEEEEEEEECCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9649999980886213999999999999860163479
No 7
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=599.30 Aligned_cols=334 Identities=37% Similarity=0.549 Sum_probs=302.0
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHH-HHHHHHHHH
Q ss_conf 0014541013226999999999985047527986567753023038942347605104899873679998-799999954
Q 003672 438 ELKGNIRVFCRVRPLLPDDGVGADASIISYPTSLESQGRGIDLIQNGQKFPFTFDKVFNHEASQQDVFLE-ISQLVQSAL 516 (804)
Q Consensus 438 ~Lk~~i~~~~r~~~~~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~f~fd~vf~~~~~q~~v~~~-~~~lv~~~~ 516 (804)
..++.|++++|+||+...|...+....+.++..... ..+.+ ..+.|.||+||+++++|++||.. +.|+|++++
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~--~~i~~----~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l 81 (365)
T 2y65_A 8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEE--NCISI----AGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVL 81 (365)
T ss_dssp CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTT--CEEEE----TTEEEECSEEECTTCCHHHHHHHHTHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCC--CEEEE----CCEEEECCEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 899995999994969946731599259994799877--67998----998986746964789989999986303779986
Q ss_pred CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHCCCCCCCC
Q ss_conf 57772587422578776235246999765777507889999986566342381899999875445005653007877899
Q 003672 517 DGYKVCIFAYGQTGSGKTYTMMGKPEAQEHKGLIPRSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRAGG 596 (804)
Q Consensus 517 ~G~n~~i~~yG~t~sGKt~tl~G~~~~~~~~Gli~r~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~i~DLL~~~~~~~ 596 (804)
+|||+||||||||||||||||+|+++.+..+|||||++++||..+.. ....+.|.|.+||+|||||+|+|||.+..
T Consensus 82 ~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~-~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--- 157 (365)
T 2y65_A 82 AGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYA-MEVNLEFHIKVSYYEIYMDKIRDLLDVSK--- 157 (365)
T ss_dssp TTCCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHH-CCSCEEEEEEEEEEEEETTEEEETTCTTC---
T ss_pred CCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH-CCCCCEEEEEEEEEEEECCEEEECCCCCC---
T ss_conf 79824898345899999648866888755577377999999999983-36895399999999998772126225876---
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECC
Q ss_conf 87765568999975048768999858604579996999999999999984043344657645789601899999744066
Q 003672 597 SDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEA 676 (804)
Q Consensus 597 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsH~i~~l~i~~~~~~ 676 (804)
..+.+++++.+++++.|++++.|.+++++..+|..|..+|.++.|.+|..|||||+||+|+|.+.+..
T Consensus 158 ------------~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~ 225 (365)
T 2y65_A 158 ------------VNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLE 225 (365)
T ss_dssp ------------CSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETT
T ss_pred ------------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECC
T ss_conf ------------77237887999878427889965879999999999986466523568887887639999999997058
Q ss_pred CCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 54323106888836887545467787410377589999699999999985028-99987678843224455679995079
Q 003672 677 TEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKK-EDHIPYRNSKLTYLLQPCLGRDSKTL 755 (804)
Q Consensus 677 ~~~~~~~~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~-~~~~p~r~s~LT~lL~~~lgg~~~t~ 755 (804)
......|+|+|||||||||..++++.|.+++|+..||+||++|++||.+|+.+ ..|||||+||||+||+|+|||||+|+
T Consensus 226 ~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~ 305 (365)
T 2y65_A 226 NQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTT 305 (365)
T ss_dssp TCCEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEE
T ss_pred CCCEEEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEE
T ss_conf 88786899999979998820121895224789988888899999899998527888786635788898776138996379
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99983799999687599999787831043588864443
Q 003672 756 MFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLT 793 (804)
Q Consensus 756 ~i~~isp~~~~~~etl~tL~~a~r~~~~~~~~~~~~~~ 793 (804)
||+||||...+++||++||+||+|++.|++.|..+...
T Consensus 306 mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~ 343 (365)
T 2y65_A 306 IVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEEL 343 (365)
T ss_dssp EEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCC
T ss_conf 99984675278899999999999972156754117889
No 8
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=597.64 Aligned_cols=340 Identities=39% Similarity=0.578 Sum_probs=300.6
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEC-----CCCEEEEEECCCCCCCCCHHHHHHH-H
Q ss_conf 111001454101322699999999998504752798656775302303-----8942347605104899873679998-7
Q 003672 435 TILELKGNIRVFCRVRPLLPDDGVGADASIISYPTSLESQGRGIDLIQ-----NGQKFPFTFDKVFNHEASQQDVFLE-I 508 (804)
Q Consensus 435 ~i~~Lk~~i~~~~r~~~~~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~~~~f~fd~vf~~~~~q~~v~~~-~ 508 (804)
......+.|++++|+||+...|...+...++.+..... .+.+.. ....+.|.||+||+++++|++||.. +
T Consensus 15 ~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~----~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~ 90 (372)
T 3b6u_A 15 YFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLG----QVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETF 90 (372)
T ss_dssp ------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTT----EEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTH
T ss_pred CCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCC----EEEEECCCCCCCCCCEEEECCEEECCCCCHHHHHHHHH
T ss_conf 66789998399998698993553049963899958998----79997788777778438876869688674178988787
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHH
Q ss_conf 99999954577725874225787762352469997657775078899999865663423818999998754450056530
Q 003672 509 SQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPEAQEHKGLIPRSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDL 588 (804)
Q Consensus 509 ~~lv~~~~~G~n~~i~~yG~t~sGKt~tl~G~~~~~~~~Gli~r~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~i~DL 588 (804)
.|+|+++++|||+||||||||||||||||+|....++.+|||||++.+||..+.. ...+.|.|.+||+|||||.|+||
T Consensus 91 ~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~~v~vS~~EIYnE~i~DL 168 (372)
T 3b6u_A 91 RPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISR--SQNQQYLVRASYLEIYQEEIRDL 168 (372)
T ss_dssp HHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHT--CSSCEEEEEEEEEEEETTEEEET
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH--CCCCCEEEEEEEEEEECCEEEEC
T ss_conf 7778998679813588656899999875755899834488188999999998651--45773699998999967888997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 07877899877655689999750487689998586045799969999999999999840433446576457896018999
Q 003672 589 LSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL 668 (804)
Q Consensus 589 L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsH~i~~l 668 (804)
|.+... ..+.+++++.+++++.|++++.|.+++++..+|..|..+|.++.|.+|..|||||+||+|
T Consensus 169 L~~~~~--------------~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i 234 (372)
T 3b6u_A 169 LSKDQT--------------KRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVI 234 (372)
T ss_dssp TSSCTT--------------CCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEE
T ss_pred CCCCCC--------------CCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE
T ss_conf 789777--------------773689879996752898899926799999999999976672545577877764299999
Q ss_pred EEEEEECC---CCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCC
Q ss_conf 99744066---543231068888368875454677874103775899996999999999850289-99876788432244
Q 003672 669 RIFGVNEA---TEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKE-DHIPYRNSKLTYLL 744 (804)
Q Consensus 669 ~i~~~~~~---~~~~~~~~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~-~~~p~r~s~LT~lL 744 (804)
+|...+.. ......|+|+|||||||||..++++.+.+++|+..||+||++|++||.+|+.++ .|||||+||||+||
T Consensus 235 ~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lL 314 (372)
T 3b6u_A 235 TIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLL 314 (372)
T ss_dssp EEEEEC-----CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHT
T ss_pred EEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
T ss_conf 99996047788762678899999798876554457515431467565064999999999986389887866220889999
Q ss_pred CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 55679995079999837999996875999997878310435888644432
Q 003672 745 QPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTL 794 (804)
Q Consensus 745 ~~~lgg~~~t~~i~~isp~~~~~~etl~tL~~a~r~~~~~~~~~~~~~~~ 794 (804)
+|+|||||+|+||+||||...+++||++||+||+|++.|++.|..+....
T Consensus 315 qdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~ 364 (372)
T 3b6u_A 315 QDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPK 364 (372)
T ss_dssp TTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC---
T ss_pred HHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHH
T ss_conf 98629995489999968852479999999999999864556662557757
No 9
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=1.00 E-value=1 Score=594.37 Aligned_cols=337 Identities=46% Similarity=0.733 Sum_probs=292.6
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CCCCCEEEEC---CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 0145410132269999999999850475279865-6775302303---89423476051048998736799987999999
Q 003672 439 LKGNIRVFCRVRPLLPDDGVGADASIISYPTSLE-SQGRGIDLIQ---NGQKFPFTFDKVFNHEASQQDVFLEISQLVQS 514 (804)
Q Consensus 439 Lk~~i~~~~r~~~~~~~e~~~~~~~~~~~~~~~~-~~~~~i~~~~---~~~~~~f~fd~vf~~~~~q~~v~~~~~~lv~~ 514 (804)
|+++|+++||+||....+.. .....+.+..... .....+.+.. ....+.|.||+||+++++|++||.++.|+|++
T Consensus 1 lk~nIrV~vRvRP~~~~~e~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~v~~lv~~ 79 (347)
T 1f9v_A 1 MRGNIRVYCRIRPALKNLEN-SDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQS 79 (347)
T ss_dssp --CEEEEEEEECCCCTTTCC-CTTEEEEECCCBTTTTBEEEEEEEGGGTTCEEEEEESEEECTTCCHHHHHHHHHHHHGG
T ss_pred CCCCEEEEEEECCCCCCCCC-CCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEEEECEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99882999981899932256-78864898324678884589994688886735986097989988788999999887777
Q ss_pred HHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHCCCCCC
Q ss_conf 54577725874225787762352469997657775078899999865663423818999998754450056530078778
Q 003672 515 ALDGYKVCIFAYGQTGSGKTYTMMGKPEAQEHKGLIPRSLEQIFQTSQFLLVQGWKFKMQASMLEIYNETIRDLLSTSRA 594 (804)
Q Consensus 515 ~~~G~n~~i~~yG~t~sGKt~tl~G~~~~~~~~Gli~r~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~i~DLL~~~~~ 594 (804)
+++|||+||||||||||||||||+|+ .+|||||++++||..+......+|.|.|.+||+|||||+|+|||.+...
T Consensus 80 ~l~G~n~tifAYGqTGSGKTyTM~G~-----~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~ 154 (347)
T 1f9v_A 80 SLDGYNVCIFAYGQTGSGKTFTMLNP-----GDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNN 154 (347)
T ss_dssp GGGTCCEEEEEECCTTSSHHHHHHST-----TTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC----
T ss_pred HCCCCEEEEEEECCCCCCCCEECCCC-----CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEECCCCCCC
T ss_conf 50780468997778999886764479-----8872578999999999864513774289999999977863144577566
Q ss_pred CCCCCCCCCCCCCCCCCEEEEC-CCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 9987765568999975048768-999858604579996999999999999984043344657645789601899999744
Q 003672 595 GGSDLTRTENGVPGKQYAIKHD-ANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGV 673 (804)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsH~i~~l~i~~~ 673 (804)
... .......+.++++ ..+++++.|++++.|.+.+++..+|..|..+|.++.|.+|..|||||+||+|+|.+.
T Consensus 155 ~~~------~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~ 228 (347)
T 1f9v_A 155 NKE------DTSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGS 228 (347)
T ss_dssp ---------------CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEE
T ss_pred CCC------CCCCCCCEEEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEEEEEEE
T ss_conf 543------33457742689964899559628889982999999999999973353420468888777669999999985
Q ss_pred ECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCCCCCC
Q ss_conf 066543231068888368875454677874103775899996999999999850289---99876788432244556799
Q 003672 674 NEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKE---DHIPYRNSKLTYLLQPCLGR 750 (804)
Q Consensus 674 ~~~~~~~~~~~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~---~~~p~r~s~LT~lL~~~lgg 750 (804)
+........|+|+|||||||||..++++.|.+++|+..||+||++|++||.+|+.+. .|||||+||||+||+|+|||
T Consensus 229 ~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgG 308 (347)
T 1f9v_A 229 NAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTG 308 (347)
T ss_dssp CC--CCEEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHST
T ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 37878554667999978888544445662245477878738999999999998636677886764267889999987289
Q ss_pred CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9507999983799999687599999787831043588
Q 003672 751 DSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGV 787 (804)
Q Consensus 751 ~~~t~~i~~isp~~~~~~etl~tL~~a~r~~~~~~~~ 787 (804)
||+|+||+||||...+++||++||+||+|++.|++++
T Consensus 309 nskt~mI~~vsP~~~~~~ETl~TLrfA~r~~~i~~~~ 345 (347)
T 1f9v_A 309 DSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVS 345 (347)
T ss_dssp TCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCTTTC-
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 8609999996884003899999999999974000678
No 10
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=593.59 Aligned_cols=336 Identities=32% Similarity=0.515 Sum_probs=298.1
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEE---CCCCEEEEEECCCCCCCCCHHHHHHH-HH
Q ss_conf 111100145410132269999999999850475279865677530230---38942347605104899873679998-79
Q 003672 434 NTILELKGNIRVFCRVRPLLPDDGVGADASIISYPTSLESQGRGIDLI---QNGQKFPFTFDKVFNHEASQQDVFLE-IS 509 (804)
Q Consensus 434 ~~i~~Lk~~i~~~~r~~~~~~~e~~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~f~fd~vf~~~~~q~~v~~~-~~ 509 (804)
.......+.|++++|+||+...|...+...++...++.. +.+. .....+.|.||+||+++++|.+||.. +.
T Consensus 14 ~~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~-----~~i~~~~~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~ 88 (388)
T 3bfn_A 14 LYFQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCS-----LEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQ 88 (388)
T ss_dssp CCSSSCCCCCEEEEEECCCC----------------------------------CEEEEECSEEECTTCCHHHHHHHHTG
T ss_pred CCCCCCCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCE-----EEEECCCCCCCEEEEECCEEECCCCCHHHHHHHHHH
T ss_conf 445689999799997798991453469986399559985-----999568888770598723695678977577899888
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH--HHCCCEEEEEEEEEEEECHHHHH
Q ss_conf 9999954577725874225787762352469997657775078899999865663--42381899999875445005653
Q 003672 510 QLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPEAQEHKGLIPRSLEQIFQTSQFL--LVQGWKFKMQASMLEIYNETIRD 587 (804)
Q Consensus 510 ~lv~~~~~G~n~~i~~yG~t~sGKt~tl~G~~~~~~~~Gli~r~~~~lf~~~~~~--~~~~~~~~v~~S~~ei~~e~i~D 587 (804)
|+|+++++|||+||||||||||||||||+|++ +.+|||||++.+||..+... ....+.|.|.+||+|||||+|+|
T Consensus 89 plv~~~l~G~N~tifAYGqTGSGKTyTM~G~~---~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~D 165 (388)
T 3bfn_A 89 PILRHLLEGQNASVLAYGPTGAGKTHTMLGSP---EQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLD 165 (388)
T ss_dssp GGHHHHTTTCCEEEEEESCTTSSHHHHHTBCS---SSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHCCCEEEEEEECCCCCCCCEEEECCC---CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEE
T ss_conf 88887616965667611688899976865675---566416899999999998742337771489999999998886456
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 00787789987765568999975048768999858604579996999999999999984043344657645789601899
Q 003672 588 LLSTSRAGGSDLTRTENGVPGKQYAIKHDANGNTHVSDLTIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFT 667 (804)
Q Consensus 588 LL~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsH~i~~ 667 (804)
||.+.. ..+.|++++.+++++.|++++.|.+++++..+|..|..+|.++.|.+|..|||||+||+
T Consensus 166 LL~~~~---------------~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~ 230 (388)
T 3bfn_A 166 LLDPAS---------------GDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLL 230 (388)
T ss_dssp SSSCSS---------------CBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEE
T ss_pred HHCCCC---------------CCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
T ss_conf 001678---------------88459986999988536059995899999999999750265223647787777739999
Q ss_pred EEEEEEECCC-CCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9997440665-432310688883688754546778741037758999969999999998502899987678843224455
Q 003672 668 LRIFGVNEAT-EQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQP 746 (804)
Q Consensus 668 l~i~~~~~~~-~~~~~~~l~~vDLagse~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~~p~r~s~LT~lL~~ 746 (804)
|+|.+.+... .....|+|+|||||||||..++++.|.+++|+..||+||++|++||.+|+.+..|||||+||||+||+|
T Consensus 231 i~v~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqd 310 (388)
T 3bfn_A 231 VKVDQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQD 310 (388)
T ss_dssp EEEEEEESSTTCCEEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTT
T ss_pred EEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 99998226888733688999998987766554567551147776750639999999999966999886756588999998
Q ss_pred CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 6799950799998379999968759999978783104358886444
Q 003672 747 CLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQL 792 (804)
Q Consensus 747 ~lgg~~~t~~i~~isp~~~~~~etl~tL~~a~r~~~~~~~~~~~~~ 792 (804)
+|||||+|+||+||||...+++||++||+||+|++.|++.|..+..
T Consensus 311 sLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~ 356 (388)
T 3bfn_A 311 SLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNES 356 (388)
T ss_dssp SSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC--------
T ss_pred HHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 6089962899999798500089999999999998517576735678
Done!