Query 003674
Match_columns 804
No_of_seqs 384 out of 2700
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 03:53:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003674.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003674hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1957 URH1 Inosine-uridine n 100.0 3.9E-59 8.4E-64 499.3 28.1 301 414-776 1-310 (311)
2 PRK09955 rihB ribonucleoside h 100.0 7.2E-58 1.6E-62 497.1 29.1 302 414-776 2-309 (313)
3 PLN02717 uridine nucleosidase 100.0 1.3E-56 2.7E-61 488.6 30.8 302 416-775 1-315 (316)
4 PRK10768 ribonucleoside hydrol 100.0 5.5E-56 1.2E-60 481.5 30.1 296 415-776 2-303 (304)
5 PRK10443 rihA ribonucleoside h 100.0 8.8E-56 1.9E-60 481.0 31.0 302 415-775 2-309 (311)
6 cd02651 nuc_hydro_IU_UC_XIUA n 100.0 5.6E-56 1.2E-60 481.3 28.6 296 417-773 1-302 (302)
7 cd02653 nuc_hydro_3 NH_3: A su 100.0 5.5E-55 1.2E-59 476.3 28.5 300 417-777 1-310 (320)
8 cd02649 nuc_hydro_CeIAG nuc_hy 100.0 7.9E-55 1.7E-59 472.1 27.8 293 416-769 1-305 (306)
9 cd02650 nuc_hydro_CaPnhB NH_hy 100.0 1.1E-53 2.3E-58 463.9 29.1 295 417-770 1-304 (304)
10 PTZ00313 inosine-adenosine-gua 100.0 3.1E-53 6.8E-58 463.6 29.4 317 415-774 2-324 (326)
11 PF01156 IU_nuc_hydro: Inosine 100.0 3.5E-53 7.7E-58 461.0 17.1 301 415-775 1-311 (312)
12 cd02654 nuc_hydro_CjNH nuc_hyd 100.0 5.9E-52 1.3E-56 452.3 26.2 303 417-769 1-318 (318)
13 cd02647 nuc_hydro_TvIAG nuc_hy 100.0 4.4E-51 9.6E-56 443.5 25.4 298 416-771 1-308 (312)
14 cd00455 nuc_hydro nuc_hydro: N 100.0 2E-50 4.4E-55 436.4 27.7 290 418-769 1-295 (295)
15 cd02648 nuc_hydro_1 NH_1: A su 100.0 2.6E-48 5.7E-53 423.6 26.9 295 415-750 1-349 (367)
16 COG1957 URH1 Inosine-uridine n 100.0 4.6E-47 1E-51 406.4 20.2 218 1-294 55-275 (311)
17 PRK09955 rihB ribonucleoside h 100.0 3.8E-45 8.3E-50 397.5 22.2 216 1-294 56-274 (313)
18 PLN02717 uridine nucleosidase 100.0 9.2E-45 2E-49 395.5 22.3 221 1-295 53-275 (316)
19 cd02651 nuc_hydro_IU_UC_XIUA n 100.0 3.6E-44 7.7E-49 389.0 21.6 216 1-294 52-270 (302)
20 cd02650 nuc_hydro_CaPnhB NH_hy 100.0 1.1E-43 2.3E-48 385.7 21.8 220 1-295 52-273 (304)
21 cd02653 nuc_hydro_3 NH_3: A su 100.0 1.5E-43 3.2E-48 386.5 21.4 217 1-294 52-274 (320)
22 PRK10443 rihA ribonucleoside h 100.0 4.2E-43 9.1E-48 381.7 21.9 217 1-294 55-275 (311)
23 PRK10768 ribonucleoside hydrol 100.0 4.4E-43 9.5E-48 380.6 21.4 211 1-294 55-268 (304)
24 cd02649 nuc_hydro_CeIAG nuc_hy 100.0 6.6E-43 1.4E-47 379.0 22.0 219 1-294 53-277 (306)
25 cd02654 nuc_hydro_CjNH nuc_hyd 100.0 5.1E-42 1.1E-46 374.3 20.5 221 1-294 56-287 (318)
26 PTZ00313 inosine-adenosine-gua 100.0 6.4E-41 1.4E-45 366.7 22.2 229 1-294 56-295 (326)
27 cd00455 nuc_hydro nuc_hydro: N 100.0 3.8E-40 8.2E-45 356.4 22.3 216 1-294 51-268 (295)
28 cd02647 nuc_hydro_TvIAG nuc_hy 100.0 2.7E-40 5.8E-45 359.2 20.4 176 81-295 103-285 (312)
29 PF01156 IU_nuc_hydro: Inosine 100.0 2.1E-40 4.5E-45 360.8 12.3 218 1-293 54-277 (312)
30 KOG2938 Predicted inosine-urid 100.0 1.4E-39 3.1E-44 352.8 18.1 304 414-776 20-335 (350)
31 cd02648 nuc_hydro_1 NH_1: A su 100.0 1.6E-38 3.6E-43 346.9 21.8 227 6-295 78-345 (367)
32 cd02652 nuc_hydro_2 NH_2: A su 100.0 1.5E-32 3.3E-37 294.8 17.3 188 418-664 1-206 (293)
33 KOG2938 Predicted inosine-urid 100.0 2E-29 4.3E-34 273.8 15.0 218 1-293 74-298 (350)
34 cd02652 nuc_hydro_2 NH_2: A su 99.9 5.3E-26 1.1E-30 244.4 15.0 155 82-288 91-266 (293)
35 PF07632 DUF1593: Protein of u 95.3 0.039 8.4E-07 59.0 6.8 144 417-607 1-159 (260)
36 PF00455 DeoRC: DeoR C termina 49.8 36 0.00079 33.9 5.9 72 556-655 31-102 (161)
37 PF10609 ParA: ParA/MinD ATPas 47.5 52 0.0011 29.4 5.8 54 417-479 3-57 (81)
38 PRK09802 DNA-binding transcrip 46.2 55 0.0012 35.5 7.0 59 572-654 130-188 (269)
39 PRK13509 transcriptional repre 30.9 1.3E+02 0.0028 32.2 6.8 59 572-655 116-174 (251)
40 PRK10906 DNA-binding transcrip 30.4 1.5E+02 0.0032 31.9 7.2 59 572-654 115-173 (252)
41 PRK10681 DNA-binding transcrip 29.9 1.5E+02 0.0032 31.8 7.1 59 572-654 116-174 (252)
42 PF07632 DUF1593: Protein of u 27.4 62 0.0013 35.1 3.6 48 84-132 99-158 (260)
43 PRK10411 DNA-binding transcrip 26.7 1.6E+02 0.0036 31.2 6.7 59 572-654 116-174 (240)
44 PF03054 tRNA_Me_trans: tRNA m 21.5 2.8E+02 0.0061 31.5 7.6 59 416-480 1-67 (356)
45 PRK09802 DNA-binding transcrip 21.2 3.7E+02 0.0081 29.1 8.2 73 84-199 115-188 (269)
46 COG2248 Predicted hydrolase (m 20.8 99 0.0021 33.5 3.5 42 462-511 118-161 (304)
No 1
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.9e-59 Score=499.26 Aligned_cols=301 Identities=29% Similarity=0.392 Sum_probs=253.5
Q ss_pred CCCcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCC
Q 003674 414 LGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPI 492 (804)
Q Consensus 414 ~~~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~ 492 (804)
+++|||||||+|+||++||+|||.+| +++|+||| |+||...++. ..|++.+|+.+|+.+||||+|+.+||..+.
T Consensus 1 ~~~kiiiD~DpG~DDaiAlllal~~p--~i~l~giTtv~GNv~le~t-~~Na~~~l~~~g~~~iPV~~Ga~~Pl~r~~-- 75 (311)
T COG1957 1 MMRKIIIDCDPGHDDAIALLLALASP--EIDLLGITTVAGNVPLEQT-TRNALSVLELLGRADIPVYAGAARPLLREP-- 75 (311)
T ss_pred CCceEEEeCCCChhHHHHHHHHhcCC--CceEEEEEEecCcccHhHH-HHHHHHHHHHcCCCCCCeecCCCCCcCCCC--
Confidence 36899999999999999999999999 99999998 8999998876 578999999999999999999999997653
Q ss_pred CCCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCC
Q 003674 493 DPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGS 571 (804)
Q Consensus 493 ~p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~ 571 (804)
.++ +..||.+||++. .+|++..+.. .+ .| .++|++++ ++++
T Consensus 76 -------~~a-~~iHG~~Gl~~~--------~lp~~~~~~~------------------~~-~A---~~~ii~~l~~~~g 117 (311)
T COG1957 76 -------ITA-PEIHGESGLGGP--------ELPEPTRKLE------------------SK-HA---VDAIIDTLMANPG 117 (311)
T ss_pred -------cch-hhhcCCcCCCCC--------CCCccccccc------------------CC-cH---HHHHHHHHHhCCC
Confidence 233 346999999875 4666432211 01 23 35566665 3668
Q ss_pred cEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEe
Q 003674 572 KITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLI 651 (804)
Q Consensus 572 ~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlv 651 (804)
+||||++|||||||+|++++|+++++||+||||||++.. +||++ +.||||+|+|||||++||+|+++++|+
T Consensus 118 ~vtlva~GPLTNiAlAl~~~P~i~~~ik~iviMGGa~~~----~GNvt-----p~AEfNi~~DPeAA~iVf~sg~~i~mv 188 (311)
T COG1957 118 EVTLVATGPLTNIALALRKDPEIAKRIKEIVIMGGAFFV----PGNVT-----PAAEFNIWVDPEAAKIVFTSGWPITMV 188 (311)
T ss_pred cEEEEecCChHHHHHHHHhCcchhhhhcEEEEecCccCC----CCCcC-----cchhhhhccCHHHHHHHHhCCCceEEe
Confidence 999999999999999999999999999999999999986 69997 589999999999999999999999999
Q ss_pred cccccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccc-e--EEE
Q 003674 652 PLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT-V--QVK 728 (804)
Q Consensus 652 pldvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~-~--~~~ 728 (804)
|||+|+|+..+++.++++++.+ ++.++|+.++++++.++.+... ...+.++||++|+++ +++|. | ...
T Consensus 189 ~LdvT~q~~~t~~~~~~~~~~~-~~~~~~~~d~l~~~~~~~~~~~--g~~g~~~hD~~a~a~------l~~p~l~~~~~~ 259 (311)
T COG1957 189 PLDVTHQVLLTPDVLARLRAAG-GPAAELVADLLDFYLAYYKSRQ--GLDGAPLHDPLAVAY------LLDPELFTTREA 259 (311)
T ss_pred chhhhhhhcCCHHHHHHHHHhC-CccHHHHHHHHHHHHHHHhhcc--CCCCCCcccHHHHHH------HhChhhhcceEE
Confidence 9999999999999999999876 7888999999999998876543 222457999996665 45553 3 455
Q ss_pred EEEEEEccCccccceEEEecC----CCcceEEEEecCHHHHHHHHHHHHhcc
Q 003674 729 SIKVIAEGNEYKDGQTVIDKN----QGIFVRVIENLDPEAYYDLFANELNSK 776 (804)
Q Consensus 729 ~v~V~~~~~~~~~G~tvvd~~----~~~~v~v~~~vD~~~f~~~l~~~L~~~ 776 (804)
+|+|++.+ +.++|+|++|+. ..+|++|+.++|.++|++++.++|.+.
T Consensus 260 ~V~Ve~~~-~lt~G~Tv~d~~~~~~~~~n~~v~~~vD~~~f~~~i~~~l~~~ 310 (311)
T COG1957 260 NVDVETAG-GLTRGMTVVDWRGVLGKPPNAQVAVDVDVEGFLDLILEALARL 310 (311)
T ss_pred EEEEEeCC-CCcCcceEEEecccCCCCCCeEEeeccCHHHHHHHHHHHHhcc
Confidence 67777765 589999999987 358999999999999999999999764
No 2
>PRK09955 rihB ribonucleoside hydrolase 2; Provisional
Probab=100.00 E-value=7.2e-58 Score=497.06 Aligned_cols=302 Identities=21% Similarity=0.248 Sum_probs=246.0
Q ss_pred CCCcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCC
Q 003674 414 LGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPI 492 (804)
Q Consensus 414 ~~~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~ 492 (804)
+++|||||||+|+||++||+|||.+| +++|+||| |+||++..++ .+|++++|+.+|+ +||||+|+..||..+.
T Consensus 2 ~~~kvIiDtD~G~DDa~Al~~al~~p--~~ev~gIttv~GN~~~~~~-~~Nal~~l~~~g~-~IPV~~Ga~~PL~~~~-- 75 (313)
T PRK09955 2 EKRKIILDCDPGHDDAIAMMMAAKHP--AIDLLGITIVAGNQTLDKT-LINGLNVCQKLEI-NVPVYAGMPQPIMRQQ-- 75 (313)
T ss_pred CCceEEEECCCChHHHHHHHHHhcCC--CcEEEEEEecCCCcCHHHH-HHHHHHHHHHhCC-CCCEEeCCCCCCCCCC--
Confidence 45799999999999999999999999 89999999 7999998876 5789999999997 7999999999996642
Q ss_pred CCCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCC
Q 003674 493 DPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGS 571 (804)
Q Consensus 493 ~p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~ 571 (804)
.+. ...||.+|||+. .+|++.... ....|. ++|++++ ++++
T Consensus 76 -------~~~-~~~HG~~Glg~~--------~~~~~~~~~-------------------~~~~A~---~~i~~~~~~~p~ 117 (313)
T PRK09955 76 -------IVA-DNIHGETGLDGP--------VFEPLTRQA-------------------ESTHAV---KYIIDTLMASDG 117 (313)
T ss_pred -------CCc-cccCCCCCCCCC--------CCCCccccc-------------------CCCcHH---HHHHHHHHhCCC
Confidence 122 236999999885 345432110 011243 4455444 4677
Q ss_pred cEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEe
Q 003674 572 KITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLI 651 (804)
Q Consensus 572 ~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlv 651 (804)
+||||++|||||||+|++++|++.++||+||+|||++. .||++ +.+|||+|+|||||++||+|++|++++
T Consensus 118 eitiva~GPLTNlA~al~~~P~~~~~i~~iviMGG~~~-----~GN~t-----p~aEfN~~~DPeAA~iV~~s~~~i~~v 187 (313)
T PRK09955 118 DITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYG-----TGNFT-----PSAEFNIFADPEAARVVFTSGVPLVMM 187 (313)
T ss_pred CEEEEEcCcHHHHHHHHHHChHHHHhCCEEEEeCCCCC-----CCCCC-----CCeeeccccCHHHHHHHHhCCCCEEEe
Confidence 89999999999999999999999999999999999984 49986 689999999999999999999999999
Q ss_pred cccccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEEEEE
Q 003674 652 PLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIK 731 (804)
Q Consensus 652 pldvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~~v~ 731 (804)
|||+|+++.++++++++|++.+ ++.++|+.+++++|.+++.+.. ...+..+||++|++++.+| .++ .++..+++
T Consensus 188 ~lDvT~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~--g~~g~~lhD~la~a~~~~P-~l~--~~~~~~v~ 261 (313)
T PRK09955 188 GLDLTNQTVCTPDVIARMERAG-GPAGELFSDIMNFTLKTQFENY--GLAGGPVHDATCIGYLINP-DGI--KTQEMYVE 261 (313)
T ss_pred ccccccceecCHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHhhc--CCCCCccChHHHHHHHcCh-hhE--EEEEeeEE
Confidence 9999999999999999998765 8899999999998877654322 2224569999976654333 222 24556788
Q ss_pred EEEccCccccceEEEecCC----CcceEEEEecCHHHHHHHHHHHHhcc
Q 003674 732 VIAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANELNSK 776 (804)
Q Consensus 732 V~~~~~~~~~G~tvvd~~~----~~~v~v~~~vD~~~f~~~l~~~L~~~ 776 (804)
|++.+ +.++|+|++|+.+ .+|++|+.++|.++|+++|.++|...
T Consensus 262 Ve~~g-~~t~G~tv~d~~~~~~~~~n~~v~~~vD~~~f~~~~~~~l~~~ 309 (313)
T PRK09955 262 VDVNS-GPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGY 309 (313)
T ss_pred EEeCC-CCCCceEEecccccCCCCCCCEEeeecCHHHHHHHHHHHHHHH
Confidence 88775 6899999998643 46899999999999999999999664
No 3
>PLN02717 uridine nucleosidase
Probab=100.00 E-value=1.3e-56 Score=488.58 Aligned_cols=302 Identities=25% Similarity=0.317 Sum_probs=244.0
Q ss_pred CcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCCC
Q 003674 416 KPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDP 494 (804)
Q Consensus 416 ~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~p 494 (804)
+|||||||+|+||++||+|||.+| +++|+||| |+||++.+++ .+|++++|+++|+.+||||+|+..||.....
T Consensus 1 ~~vIiDtD~GiDDa~Al~~al~~~--~~~l~gIt~v~GN~~~~~~-~~na~~ll~~~g~~diPV~~Ga~~pl~~~~~--- 74 (316)
T PLN02717 1 KKLIIDTDPGIDDAMAILMALRSP--EVEVIGLTTIFGNVTTKLA-TRNALHLLEMAGRPDVPVAEGSHEPLKGGTK--- 74 (316)
T ss_pred CcEEEECCCChHHHHHHHHHhcCC--CceEEEEEEccCCcCHHHH-HHHHHHHHHHcCCCCCCEEeCCCCCCCCCCC---
Confidence 689999999999999999999999 89999998 7999998876 5789999999999999999999999976421
Q ss_pred CCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCCcE
Q 003674 495 SVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGSKI 573 (804)
Q Consensus 495 ~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~~v 573 (804)
..+ ...+||.+|||+. .+|++.... ....|. ++|++++ +++++|
T Consensus 75 ----~~~-~~~~hG~dGlg~~--------~~p~~~~~~-------------------~~~~A~---~~i~~~~~~~~~~i 119 (316)
T PLN02717 75 ----PRI-ADFVHGSDGLGNT--------NLPPPKGKK-------------------IEKSAA---EFLVEKVSEYPGEV 119 (316)
T ss_pred ----CcC-CccCCCCCCCCCC--------CCCCCCCCc-------------------CCCCHH---HHHHHHHHhCCCCE
Confidence 011 2346999999986 345432111 011243 3444444 356799
Q ss_pred EEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEecc
Q 003674 574 TLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPL 653 (804)
Q Consensus 574 tIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlvpl 653 (804)
|||++|||||||+|++++|++.++||+||+|||++.. .||++ +.||||||+|||||++||+|+++++++||
T Consensus 120 tiva~GPLTNlA~al~~~P~~~~~ik~iviMGG~~~~----~GN~t-----p~aEfN~~~DPeAA~iVl~s~~~i~~v~l 190 (316)
T PLN02717 120 TVVALGPLTNLALAIKLDPSFAKKVGQIVVLGGAFFV----NGNVN-----PAAEANIFGDPEAADIVFTSGADITVVGI 190 (316)
T ss_pred EEEECCcHHHHHHHHHHChHHHhhcCEEEEeCCCcCC----CCCCC-----chhhhhhhcCHHHHHHHHhCCCCeEEEcc
Confidence 9999999999999999999999999999999999865 59986 68999999999999999999999999999
Q ss_pred cccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEEEEEEE
Q 003674 654 GVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVI 733 (804)
Q Consensus 654 dvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~~v~V~ 733 (804)
|+|+++.++.+++++|.+.+ ++.++|+.+++++|.+++.+..+. ....+||++|++++.+| .++ .++..+++|+
T Consensus 191 dvt~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~D~la~a~~~~P-~~~--~~~~~~v~Ve 264 (316)
T PLN02717 191 NVTTQVVLTDADLEELRDSK-GKYAQFLCDICKFYRDWHRKSYGI--DGIYLHDPTALLAAVRP-SLF--TYKEGVVRVE 264 (316)
T ss_pred cccCceecCHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHhhcCC--CcccCCcHHHhHHhcCc-cce--EEEEecEEEE
Confidence 99999999999999998764 789999999999888765543222 24579999976654433 221 2345567777
Q ss_pred EccCccccceEEEecC-----------CCcceEEEEecCHHHHHHHHHHHHhc
Q 003674 734 AEGNEYKDGQTVIDKN-----------QGIFVRVIENLDPEAYYDLFANELNS 775 (804)
Q Consensus 734 ~~~~~~~~G~tvvd~~-----------~~~~v~v~~~vD~~~f~~~l~~~L~~ 775 (804)
+++ .+||+|++|+. +.+|++|+.++|.++|+++|.++|..
T Consensus 265 ~~g--~trG~tv~d~~~~~~~~~~~~~~~~n~~v~~~vD~~~f~~~~~~~l~~ 315 (316)
T PLN02717 265 TEG--ICRGLTLFDNGLKRWNGENAWTGRPPVKVAVTVDAPAVVELVKERLMA 315 (316)
T ss_pred eCC--CCCceEeeeccccccccccccCCCCCCEEeeecCHHHHHHHHHHHhcc
Confidence 763 79999999862 13589999999999999999999853
No 4
>PRK10768 ribonucleoside hydrolase RihC; Provisional
Probab=100.00 E-value=5.5e-56 Score=481.48 Aligned_cols=296 Identities=26% Similarity=0.352 Sum_probs=241.5
Q ss_pred CCcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCC
Q 003674 415 GKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPID 493 (804)
Q Consensus 415 ~~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~ 493 (804)
++|||||||+|+||++||+|||.+| +++|+||| |+||.+.+++ .+|++++|+++| .+||||+|+.+||..+..
T Consensus 2 ~~kvIiDtD~g~DDa~Al~~al~~p--~~~v~git~v~GN~~~~~~-~~na~~~l~~~g-~dIPV~~Ga~~pl~~~~~-- 75 (304)
T PRK10768 2 RLPIILDTDPGIDDAVAIAAALFAP--ELDLKLITTVAGNVSVEKT-TRNALKLLHFFN-SDVPVAQGAAKPLVRPLR-- 75 (304)
T ss_pred CCCEEEECCCCHHHHHHHHHHhcCC--CceEEEEEecCCcccHHHH-HHHHHHHHHHhC-CCCeEEeCCccccCCCCC--
Confidence 4799999999999999999999999 89999998 7999998876 568999999999 799999999999975421
Q ss_pred CCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCCc
Q 003674 494 PSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGSK 572 (804)
Q Consensus 494 p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~~ 572 (804)
.. ..+||.+||++. .+|.+.... ....|. ++|++++ +++++
T Consensus 76 -------~~-~~~hG~~Gl~~~--------~~p~~~~~~-------------------~~~~A~---~~i~~~~~~~~~~ 117 (304)
T PRK10768 76 -------DA-ASVHGESGMEGY--------DFPEHTRKP-------------------LSIPAV---EAMRDALMNAPEP 117 (304)
T ss_pred -------Cc-ccccCCCCCCCC--------CCCCCCCCC-------------------CCccHH---HHHHHHHHhCCCC
Confidence 12 236999999986 355432110 011233 4555555 46689
Q ss_pred EEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEec
Q 003674 573 ITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIP 652 (804)
Q Consensus 573 vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlvp 652 (804)
|+||++|||||||+|++++|++.++||+||+|||++. .||++ +.+|||+|+|||||++||+|++|++++|
T Consensus 118 itila~GPLTNlA~al~~~P~i~~~i~~iviMGG~~~-----~GN~t-----~~aEfN~~~DPeAA~iVl~s~~~i~~vp 187 (304)
T PRK10768 118 VTLVAIGPLTNIALLLSTYPEVKPYIKRIVLMGGSAG-----RGNVT-----PNAEFNIAVDPEAAAIVFRSGIPIVMCG 187 (304)
T ss_pred EEEEECCcHHHHHHHHHHChhhHhhcCEEEEecCCcC-----cCCCC-----ccchhccCCCHHHHHHHHhCCCCeEEec
Confidence 9999999999999999999999999999999999985 49986 6899999999999999999999999999
Q ss_pred ccccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEEEEEE
Q 003674 653 LGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKV 732 (804)
Q Consensus 653 ldvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~~v~V 732 (804)
||+|+++.++++++++|++. ++.++|+.+++++|.+.... .+..+||++|++++.+| .++ .++..+++|
T Consensus 188 ldvt~~~~~t~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~------~g~~~hD~la~a~~~~P-~~~--~~~~~~v~V 256 (304)
T PRK10768 188 LDVTNQALLTPDYLATLPEL--NRTGKMLHALFSHYRSGSMQ------TGLRMHDVCAIAYLLRP-ELF--TLKPCFVDV 256 (304)
T ss_pred cccceeeecCHHHHHHHHhc--ChHHHHHHHHHHHHHhhccc------CCCCcCcHHHhhheeCc-ccE--EEEEecEEE
Confidence 99999999999999999865 68899999998887653221 14568999977765444 222 244556788
Q ss_pred EEccCccccceEEEecCC----CcceEEEEecCHHHHHHHHHHHHhcc
Q 003674 733 IAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANELNSK 776 (804)
Q Consensus 733 ~~~~~~~~~G~tvvd~~~----~~~v~v~~~vD~~~f~~~l~~~L~~~ 776 (804)
++++ ..+||+|++|+.. .++++|+.++|.++|+++|+++|...
T Consensus 257 e~~g-~~trG~tv~d~~~~~~~~~~~~v~~~vd~~~f~~~~~~~l~~~ 303 (304)
T PRK10768 257 ETQG-EFTAGATVVDIDGRLGKPANAQVALDIDVDGFQKWFAEVLALA 303 (304)
T ss_pred EeCC-CCCCceEEEeccccCCCCCCcEEEeecCHHHHHHHHHHHHHhc
Confidence 7765 4689999998653 36899999999999999999998654
No 5
>PRK10443 rihA ribonucleoside hydrolase 1; Provisional
Probab=100.00 E-value=8.8e-56 Score=480.95 Aligned_cols=302 Identities=26% Similarity=0.373 Sum_probs=244.5
Q ss_pred CCcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCC
Q 003674 415 GKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPID 493 (804)
Q Consensus 415 ~~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~ 493 (804)
++|||||||+|+||++||+|||++| +++|+||| |+||.+.+++ .+|++++|+++|+.+||||+|+.+|+..+..
T Consensus 2 ~~~vIiDtD~g~DDa~AL~~al~~~--~~~l~gIt~v~Gn~~~~~~-~~na~~~l~~~g~~diPV~~Ga~~pl~~~~~-- 76 (311)
T PRK10443 2 ALPIILDCDPGHDDAIALVLALASP--ELDVKAVTTSAGNQTPEKT-LRNALRMLTLLNRTDIPVAGGAVKPLMRELI-- 76 (311)
T ss_pred CCcEEEECCCChHHHHHHHHHhcCC--CceEEEEEEeCCCCCHHHH-HHHHHHHHHHhCCCCCcEEeCCCCCCCCCCc--
Confidence 4799999999999999999999999 99999999 7899987765 6789999999999999999999999965421
Q ss_pred CCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCCc
Q 003674 494 PSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGSK 572 (804)
Q Consensus 494 p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~~ 572 (804)
.. ...||.+|+++. .+|++.... +...|. ++|++++ +++++
T Consensus 77 -------~~-~~~hG~~Gl~~~--------~~p~~~~~~-------------------~~~~a~---~~i~~~~~~~~~~ 118 (311)
T PRK10443 77 -------IA-DNVHGESGLDGP--------ALPEPTFAP-------------------QNCTAV---ELMAKTLRESAEP 118 (311)
T ss_pred -------Cc-cccCCCCCCCCC--------CCCCCccCC-------------------CCccHH---HHHHHHHHhCCCC
Confidence 11 236999999875 355432100 112344 4444444 46789
Q ss_pred EEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEec
Q 003674 573 ITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIP 652 (804)
Q Consensus 573 vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlvp 652 (804)
||||++|||||||+|++++|++.++||+||+|||++. .||++ +.+|||+|+||+||++||+|++|++++|
T Consensus 119 itiva~GPLTNlA~al~~~P~~~~~i~~iviMGG~~~-----~Gn~~-----~~aEfN~~~DPeAA~~Vl~s~~~i~~vp 188 (311)
T PRK10443 119 VTLVSTGPQTNVALLLASHPELHSKIARIVIMGGAMG-----LGNWT-----PAAEFNIYVDPEAAEIVFQSGIPIVMAG 188 (311)
T ss_pred eEEEEccchHHHHHHHHHCchhhhhhCEEEEccCCCC-----CCCCC-----cchhhccCcCHHHHHHHHhCCCCEEEec
Confidence 9999999999999999999999999999999999985 49986 5899999999999999999999999999
Q ss_pred ccccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEEEEEE
Q 003674 653 LGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKV 732 (804)
Q Consensus 653 ldvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~~v~V 732 (804)
||+|+++.++++++++|...+ +|.++|+.+++.+|.++++.. .|.....++||++|++++.+| .+. .++..+++|
T Consensus 189 ldvt~~~~~t~~~~~~l~~~~-~~~~~~l~~~~~~~~~~~~~~-~~~~~g~~lhD~lava~~~~P-~~~--~~~~~~v~V 263 (311)
T PRK10443 189 LDVTHKAQIMDEDIERIRAIG-NPVATIVAELLDFFMEYHKDE-KWGFVGAPLHDPCTIAWLLKP-ELF--TTVERWVGV 263 (311)
T ss_pred ccccceeecCHHHHHHHHhcC-ChHHHHHHHHHHHHHHHhHhh-hCCCCCCCCCCHHHhHHhcCc-ceE--EEEEeCEEE
Confidence 999999999999999998765 899999999999887765431 122224679999976654333 211 234556788
Q ss_pred EEccCccccceEEEecCC----CcceEEEEecCHHHHHHHHHHHHhc
Q 003674 733 IAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANELNS 775 (804)
Q Consensus 733 ~~~~~~~~~G~tvvd~~~----~~~v~v~~~vD~~~f~~~l~~~L~~ 775 (804)
++++ +.+||+|++|..+ .++++|++++|.++|+++|.++|..
T Consensus 264 e~~g-~~trG~tv~~~~~~~~~~~n~~v~~~vd~~~f~~~l~~~l~~ 309 (311)
T PRK10443 264 ETQG-EYTQGMTVVDYYQLTGNKPNATVLVDVDRQGFVDLLAERLKF 309 (311)
T ss_pred EcCC-CCCCceEEEeccccCCCCCCCEEEeecCHHHHHHHHHHHHHh
Confidence 7765 5799999998532 4689999999999999999999864
No 6
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine a
Probab=100.00 E-value=5.6e-56 Score=481.30 Aligned_cols=296 Identities=30% Similarity=0.441 Sum_probs=240.6
Q ss_pred cEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCCCC
Q 003674 417 PVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPS 495 (804)
Q Consensus 417 kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~p~ 495 (804)
|||||||+|+||++||+|||.+| +++|+||| |+||.+.+++ .+|++++|+++|+.+||||+|+..||..+.
T Consensus 1 kvIiDtD~g~DDa~Al~~al~~~--~~~l~gIt~v~Gn~~~~~~-~~na~~ll~~~g~~diPV~~Ga~~pl~~~~----- 72 (302)
T cd02651 1 PIIIDCDPGHDDAVAILLALFHP--ELDLLGITTVAGNVPLEKT-TRNALKLLTLLGRTDVPVAAGAARPLVRPL----- 72 (302)
T ss_pred CeEEECCCCHHHHHHHHHHhcCC--CceEEEEEeccCeecHHHH-HHHHHHHHHHhCCCCCcEEcCCCcCcCCCC-----
Confidence 69999999999999999999999 89999999 7999998775 578999999999999999999999997642
Q ss_pred CCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCCcEE
Q 003674 496 VGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGSKIT 574 (804)
Q Consensus 496 ~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~~vt 574 (804)
.+. ..+||.+||++. .+|++...+ +.+.|.+ +|++++ +++++||
T Consensus 73 ----~~~-~~~hG~~Gl~~~--------~~p~~~~~~-------------------~~~~a~~---~i~~~~~~~~~evt 117 (302)
T cd02651 73 ----ITA-SDIHGESGLDGA--------DLPPPPRRP-------------------EDIHAVD---AIIDTLRASPEPIT 117 (302)
T ss_pred ----CCC-cCCCCCCCCCCC--------CCCCCCCCc-------------------CCCcHHH---HHHHHHHhCCCCEE
Confidence 122 236999999886 356532211 1123443 444444 3567999
Q ss_pred EEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEeccc
Q 003674 575 LLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLG 654 (804)
Q Consensus 575 Ila~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlvpld 654 (804)
||++|||||||+|++++|++.++||+||+|||++. .||++ +.+|||||+||+||++||+|++|++++|||
T Consensus 118 iva~GPLTNlA~al~~~P~~~~~ik~iviMGG~~~-----~GN~t-----p~aEfN~~~DPeAA~~Vl~s~~~i~~v~ld 187 (302)
T cd02651 118 LVATGPLTNIALLLRKYPELAERIKEIVLMGGALG-----RGNIT-----PAAEFNIFVDPEAAKIVFNSGIPITMVPLD 187 (302)
T ss_pred EEEcCchHHHHHHHHHChhhHhhcCEEEEecCCcC-----CCCCC-----hHHHhhcccCHHHHHHHHhCCCCeEEeccc
Confidence 99999999999999999999999999999999983 59986 689999999999999999999999999999
Q ss_pred ccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEEEEEEEE
Q 003674 655 VQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIA 734 (804)
Q Consensus 655 vt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~~v~V~~ 734 (804)
+|+++.++++++++|.+.+ +|.++|+.+++++|.+.+.... ..+..+||++|++++.+| .++ .++..+++|++
T Consensus 188 vt~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~D~la~~~~~~p-~~~--~~~~~~v~Ve~ 260 (302)
T cd02651 188 VTHKALATPEVIERIRALG-NPVGKMLAELLDFFAETYGSAF---TEGPPLHDPCAVAYLLDP-ELF--TTKRANVDVET 260 (302)
T ss_pred eeeeeccCHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHhhc---cCCCCCCcHHHhHHhcCc-cce--EEEEeeEEEEc
Confidence 9999999999999999765 7899999999988775433211 224579999976654333 221 24455677777
Q ss_pred ccCccccceEEEecCC----CcceEEEEecCHHHHHHHHHHHH
Q 003674 735 EGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANEL 773 (804)
Q Consensus 735 ~~~~~~~G~tvvd~~~----~~~v~v~~~vD~~~f~~~l~~~L 773 (804)
++ +.+||++++|+.+ .++++|+.++|.++|+++|.++|
T Consensus 261 ~g-~~~rG~tv~d~~~~~~~~~~~~v~~~vd~~~f~~~l~~~l 302 (302)
T cd02651 261 EG-ELTRGRTVVDLRGVTGRPANAQVAVDVDVEKFWDLLLEAL 302 (302)
T ss_pred CC-CCCCceEEEeccccCCCCCCcEEeeecCHHHHHHHHHHhC
Confidence 65 4899999998753 36899999999999999999865
No 7
>cd02653 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=100.00 E-value=5.5e-55 Score=476.30 Aligned_cols=300 Identities=26% Similarity=0.356 Sum_probs=243.2
Q ss_pred cEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCCCC
Q 003674 417 PVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPS 495 (804)
Q Consensus 417 kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~p~ 495 (804)
|||||||+|+||++||+|||.+| +++|+||| |+||.+.+++ .+|++++|+++|+.+||||+|+..||..+.
T Consensus 1 kvIiDtD~GiDDa~AL~~al~~p--~iel~gIt~v~GN~~~~~~-~~Na~~ll~~~g~~dIPV~~Ga~~pl~~~~----- 72 (320)
T cd02653 1 KVIIDCDPGIDDALALLYLLASP--DLDVVGITTTAGNVPVEQV-AANALGVLELLGRTDIPVYLGADKPLAGPL----- 72 (320)
T ss_pred CEEEECCCChHHHHHHHHHhhCC--CCeEEEEEEcCCccCHHHH-HHHHHHHHHHcCCCCCcEEeCCCccCCCCC-----
Confidence 69999999999999999999999 89999999 7899988765 578999999999999999999999997642
Q ss_pred CCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCCcEE
Q 003674 496 VGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGSKIT 574 (804)
Q Consensus 496 ~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~~vt 574 (804)
.+. ...||.+|||+. .+|++..... ...|.+ +|++++ +++ +||
T Consensus 73 ----~~~-~~~hG~dGlg~~--------~~p~~~~~~~-------------------~~~A~~---~i~~~~~~~~-eit 116 (320)
T cd02653 73 ----TTA-QDTHGPDGLGYA--------ELPASTRTLS-------------------DESAAQ---AWVDLARAHP-DLI 116 (320)
T ss_pred ----CCc-ccccCCCCCCCC--------CCCCCCCCCC-------------------CCCHHH---HHHHHHHhCC-CeE
Confidence 122 236999999875 3554322111 122443 444444 355 899
Q ss_pred EEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhC----CCcEEE
Q 003674 575 LLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFES----PLNITL 650 (804)
Q Consensus 575 Ila~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s----~~~itl 650 (804)
||++|||||||+|++++|++.++||+||+|||++.. +||++ +.||||+|+|||||++||+| ++++++
T Consensus 117 iva~GPLTNlA~al~~~P~~~~~ik~iviMGG~~~~----~GN~t-----p~aEfN~~~DPeAA~iVl~s~~~~~~~i~~ 187 (320)
T cd02653 117 GLATGPLTNLALALREEPELPRLLRRLVIMGGAFNS----RGNTS-----PVAEWNYWVDPEAAKEVLAAFGGHPVRPTI 187 (320)
T ss_pred EEECCchHHHHHHHHHChHHHHhcCEEEEECCCcCC----CCCCC-----cHhHHhhhcCHHHHHHHHhccccCCCCeEE
Confidence 999999999999999999999999999999999865 69986 58999999999999999998 699999
Q ss_pred ecccccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEEEE
Q 003674 651 IPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSI 730 (804)
Q Consensus 651 vpldvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~~v 730 (804)
+|||+|+++.++++++++|.+.+ ++.++|+.+++.+|.++.+... ......+||++|++++.+| .++ .++..++
T Consensus 188 vplDvt~~~~~t~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lhD~lAva~~~~P-~l~--~~~~~~v 261 (320)
T cd02653 188 CGLDVTRAVVLTPNLLERLARAK-DSVGAFIEDALRFYFEFHWAYG--HGYGAVIHDPLAAAVALNP-NLA--RGRPAYV 261 (320)
T ss_pred eccccceeeecCHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHhcC--CCCCCCCChHHHHHHhcCh-hhe--EEEEeeE
Confidence 99999999999999999998765 7899999999998887654322 2224579999976654433 221 2456678
Q ss_pred EEEEccCccccceEEEecCC----CcceEEEEecCHHHHHHHHHHHHhccc
Q 003674 731 KVIAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANELNSKN 777 (804)
Q Consensus 731 ~V~~~~~~~~~G~tvvd~~~----~~~v~v~~~vD~~~f~~~l~~~L~~~~ 777 (804)
+|++++. . +|+|++|+.. .+|++|+.++|.++|+++|+++|....
T Consensus 262 ~Ve~~g~-~-~G~tv~d~~~~~~~~~n~~v~~~vD~~~f~~~~~~~l~~~~ 310 (320)
T cd02653 262 DVECTGV-L-TGQTVVDWAGFWGKGANAEILTKVDSQDFMALFIERVLAIA 310 (320)
T ss_pred EEEeCCC-C-CceEEEeccccCCCCCCcEEeeccCHHHHHHHHHHHHHHHH
Confidence 8888763 3 5999999753 578999999999999999999997653
No 8
>cd02649 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR).
Probab=100.00 E-value=7.9e-55 Score=472.14 Aligned_cols=293 Identities=27% Similarity=0.335 Sum_probs=238.7
Q ss_pred CcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCCC
Q 003674 416 KPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDP 494 (804)
Q Consensus 416 ~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~p 494 (804)
+|||||||+|+||++||+|||.+| +++|+||| |+||++.+++ .+|++++|+++|+.+||||+|+.+||..+..
T Consensus 1 ~kviiDtD~g~DD~~Al~~al~~~--~~~l~gIt~v~GN~~~~~~-~~na~~~l~~~g~~diPV~~Ga~~pl~~~~~--- 74 (306)
T cd02649 1 RKLIIDTDCGGDDAWALLMALASP--NVEVLAITCVHGNTNVEQV-VKNALRVLEACGRRDIPVYRGASKPLLGPGP--- 74 (306)
T ss_pred CeEEEECCCChHHHHHHHHHhcCC--CceEEEEEEccCCcCHHHH-HHHHHHHHHHhCCCCCCEecCCCccCCCCCC---
Confidence 489999999999999999999999 89999998 7999998876 6789999999999999999999999976432
Q ss_pred CCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCCcE
Q 003674 495 SVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGSKI 573 (804)
Q Consensus 495 ~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~~v 573 (804)
.+ ...||.+||++. .+|++.... .+ ....|. ++|++++ +++++|
T Consensus 75 ------~~-~~~hG~~Glg~~--------~~p~~~~~~---------------~~--~~~~a~---~~i~~~~~~~~~~v 119 (306)
T cd02649 75 ------TA-AYFHGKDGFGDV--------GFPEPKDEL---------------EL--QKEHAV---DAIIRLVREYPGEI 119 (306)
T ss_pred ------Cc-cccCCCCCCCCC--------CCCCCcccC---------------Cc--CCCCHH---HHHHHHHHhCCCCe
Confidence 11 236999999886 345432100 00 111233 3444444 467899
Q ss_pred EEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhC-CCcEEEec
Q 003674 574 TLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFES-PLNITLIP 652 (804)
Q Consensus 574 tIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s-~~~itlvp 652 (804)
|||++|||||||+|++++|++.++||+||+|||++.. .||++ +.+|||+++||+||++||+| +++++++|
T Consensus 120 tiva~GPLTNlA~al~~~p~~~~~i~~iviMGG~~~~----~GN~~-----~~aEfN~~~DPeAA~~Vl~s~~~~i~lv~ 190 (306)
T cd02649 120 TLVALGPLTNLALAYRLDPSLPQKIKRLYIMGGNREG----VGNTT-----PAAEFNFHVDPEAAHIVLNSFGCPITIVP 190 (306)
T ss_pred EEEecccHHHHHHHHHHChHHHHhcCeEEEeCCCccC----CCCCC-----cccccccccCHHHHHHHHhcCCCCEEEEc
Confidence 9999999999999999999999999999999999865 59986 58999999999999999999 99999999
Q ss_pred ccccc-cccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccc-eE--E-
Q 003674 653 LGVQR-KVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT-VQ--V- 727 (804)
Q Consensus 653 ldvt~-~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~-~~--~- 727 (804)
||+|+ ++.++++++++|++. ++.++|+.+++.++.++.+... ...+..+||++|++++ ++|+ |+ .
T Consensus 191 ldvt~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~hD~lava~~------~~P~l~~~~~~ 260 (306)
T cd02649 191 WETTLLAFPLDWEFEDKWANR--LEKALFAESLNRREYAFASEGL--GGDGWVPCDALAVAAA------LDPSIITRRLT 260 (306)
T ss_pred cccccceeecCHHHHHHHHhc--ChHHHHHHHHHHHHHHHHHhhc--CCCCCCCCcHHHHHHH------cCHhHEEEEEe
Confidence 99999 999999999999864 5789999999998877654322 2224579999976654 4553 33 2
Q ss_pred EEEEEEEccCccccceEEEecCC----CcceEEEEecCHHHHHHHH
Q 003674 728 KSIKVIAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLF 769 (804)
Q Consensus 728 ~~v~V~~~~~~~~~G~tvvd~~~----~~~v~v~~~vD~~~f~~~l 769 (804)
.+++|++++ +.++|+|++|+.+ .++++|+.++|.++|+++|
T Consensus 261 ~~v~Ve~~g-~~~~G~tv~d~~~~~~~~~n~~v~~~vD~~~f~~~~ 305 (306)
T cd02649 261 YAVDVELHG-ELTRGQMVVDWLGTLKKKPNARVITKIDREKFKELL 305 (306)
T ss_pred eeEEEEECC-CCCcceEEEeccccCCCCCCCEEehhcCHHHHHHHh
Confidence 248898886 5799999999753 4789999999999999986
No 9
>cd02650 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB). Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=100.00 E-value=1.1e-53 Score=463.89 Aligned_cols=295 Identities=26% Similarity=0.329 Sum_probs=234.2
Q ss_pred cEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCCCC
Q 003674 417 PVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPS 495 (804)
Q Consensus 417 kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~p~ 495 (804)
|||||||+|+||++||+|||.+| +++|+||| |+||++.+++ .+|++++|+++|+.+||||+|+.+||..+..
T Consensus 1 kvIiDtD~g~DD~~AL~~al~~p--~~~v~gIt~~~Gn~~~~~~-~~na~~~l~~~g~~diPV~~G~~~pl~~~~~---- 73 (304)
T cd02650 1 KLILDTDPGIDDAMALAYALAHP--DVDLIGVTTVYGNVTIETA-TRNALALLELFGRPDVPVAEGAAKPLTRPPF---- 73 (304)
T ss_pred CEEEECCCCHHHHHHHHHHhcCC--CCEEEEEEEccCCcCHHHH-HHHHHHHHHHhCCCCCCEEcCCCCCCCCCCc----
Confidence 69999999999999999999999 89999998 7999998876 5789999999999999999999999976421
Q ss_pred CCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCCcEE
Q 003674 496 VGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGSKIT 574 (804)
Q Consensus 496 ~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~~vt 574 (804)
.+ ....||.+|||+. .+|.+.... ....|.+ +|++++ +++++||
T Consensus 74 ----~~-~~~~hg~dGlg~~--------~~p~~~~~~-------------------~~~~A~~---~l~~~~~~~~~~vt 118 (304)
T cd02650 74 ----RI-ATFVHGDNGLGDV--------ELPAPPRQP-------------------EDESAAD---FLIELANEYPGELT 118 (304)
T ss_pred ----CC-cCCCCCCCCCCCC--------CCCCCCCCc-------------------CccCHHH---HHHHHHHhCCCCeE
Confidence 01 2346999999886 355432211 1112443 444443 3567999
Q ss_pred EEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEeccc
Q 003674 575 LLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLG 654 (804)
Q Consensus 575 Ila~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlvpld 654 (804)
||++|||||||+|++++|++.++||+||+|||++.. .||++ +.+|||+++||+||++||+|+++++++|||
T Consensus 119 ivaiGPLTNlA~al~~~P~i~~~ik~iviMGG~~~~----~GN~~-----p~aEfN~~~DP~AA~iVl~s~~~i~~vpld 189 (304)
T cd02650 119 LVAVGPLTNLALALARDPDFAKLVKQVVVMGGAFTV----PGNVT-----PAAEANIHGDPEAADIVFTAGADLTMVGLD 189 (304)
T ss_pred EEECCcHHHHHHHHHHCcHHHhhcCEEEEeCccccC----CCCCC-----chHHhhcccCHHHHHHHHhCCCCeEEeCCc
Confidence 999999999999999999999999999999999975 59986 589999999999999999999999999999
Q ss_pred ccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEEEEEEEE
Q 003674 655 VQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIA 734 (804)
Q Consensus 655 vt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~~v~V~~ 734 (804)
+|+++.++++++++|.+.+ ++.++|+.++++.+.++..+. +...+.++||+++++++.+| .++ .++..+++|++
T Consensus 190 vt~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~g~~l~D~la~~~~~~P-~~~--~~~~~~v~Ve~ 263 (304)
T cd02650 190 VTTQTLLTREDLDELRDSG-GKAGQFLADMLDYYIDFYQES--PGLRGCALHDPLAVAAAVDP-SLF--TTREGVVRVET 263 (304)
T ss_pred eeeeEecCHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHhc--cCCCcccCCcHHHHHhhcCc-cce--EEEEeeEEEEe
Confidence 9999999999999998765 789999999999887765432 23335679999977764433 111 23445677766
Q ss_pred ccCccccceEEEecCC------CcceEEEEecCH-HHHHHHHH
Q 003674 735 EGNEYKDGQTVIDKNQ------GIFVRVIENLDP-EAYYDLFA 770 (804)
Q Consensus 735 ~~~~~~~G~tvvd~~~------~~~v~v~~~vD~-~~f~~~l~ 770 (804)
+ +.+||+|++|+.+ .+|.++...+|. ++|+++|+
T Consensus 264 ~--g~~~G~tv~d~~~~~~~~~~~~~~~~~~~d~~~~f~~~~~ 304 (304)
T cd02650 264 E--GPTRGRTIGDRDGRRFWDSSPNATVAVDVDVDERFLKRLM 304 (304)
T ss_pred C--CCCCceEEEeccccccccCCCCceEEEEEChhHHHHHHhC
Confidence 5 4789999999653 346555555555 99999873
No 10
>PTZ00313 inosine-adenosine-guanosine-nucleoside hydrolase; Provisional
Probab=100.00 E-value=3.1e-53 Score=463.59 Aligned_cols=317 Identities=22% Similarity=0.302 Sum_probs=236.3
Q ss_pred CCcEEEecCCCchHHHHHHHHHhCCCCc-eeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCC-CCeEeecCCcccCCCCC
Q 003674 415 GKPVVFDMDMSVGDFLALFYLLKAPVEV-INLKAIL-VSPTGWANAATIDVIYDLLHMMGRD-DVQVGLGDLFATNQSDP 491 (804)
Q Consensus 415 ~~kVIiDtD~G~DDalAL~~aL~~p~~~-i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~-dIPV~~Ga~~pl~~~~~ 491 (804)
++|||||||+|+||++||+|||.+| + ++|+||| |+||+..+++ .+|++++|+++||. ||||+.|+..|+....+
T Consensus 2 ~~~vIiD~D~GiDDa~Al~~al~~~--~~~~v~gIT~v~GNv~~~~~-~~Na~~vl~~~g~~~dvPv~~ga~~~~~~~~~ 78 (326)
T PTZ00313 2 PKPVILDHDGNHDDLVALALLLGNP--EKVKVIGCICTDADCFVDDA-FNVTGKLMCMMHAREATPLFPIGKSSFKGVNP 78 (326)
T ss_pred CCCEEEeCCCCHHHHHHHHHHhcCC--cCcEEEEEEEecCCccHHHH-HHHHHHHHHHhCCCCCCCeeeecCCcccCCCC
Confidence 4799999999999999999999998 6 9999999 8999998876 57899999999996 89999999999865321
Q ss_pred CCCCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCC
Q 003674 492 IDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPG 570 (804)
Q Consensus 492 ~~p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~ 570 (804)
++. .+. .-.||.+|||+. .+|++..... . ..++.....|. ++|++++ +++
T Consensus 79 -~~~----~~~-~g~~G~~glg~~--------~~p~~~~~~~---~---------~~~~~~~~~a~---~~i~~~i~~~p 129 (326)
T PTZ00313 79 -FPS----EWR-WSAKNMDDLPCL--------NIPEHVAIWE---K---------LKPENEALVGE---ELLADLVMSSP 129 (326)
T ss_pred -Ccc----hhe-ecccCCCCCCCC--------CCCCcccccc---c---------cCCccccchHH---HHHHHHHHhCC
Confidence 110 110 002777777764 3554321000 0 00000011233 4455544 467
Q ss_pred CcEEEEEccChhhHHHHHhhCc-chhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCC-CcE
Q 003674 571 SKITLLTNGPLTNLAKILSSKK-NATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESP-LNI 648 (804)
Q Consensus 571 ~~vtIla~GPLTNLA~al~~~P-ei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~-~~i 648 (804)
++||||++|||||||+|++++| ++.++||+||+|||++.. .||++..-.++.||||||+|||||++||+|+ +++
T Consensus 130 ~eItiva~GPLTNlAlal~~~pp~~~~~ik~iviMGG~~~~----~GN~~~~~~tp~AEfN~~~DPeAA~iV~~s~~~~i 205 (326)
T PTZ00313 130 EKVTICVTGPLSNVAWCIEKYGEEFTKKVEECVIMGGAVDV----GGNVFLPGTDGSAEWNIYWDPPAAKTVLMCPHIRK 205 (326)
T ss_pred CCEEEEECCcHHHHHHHHHhCCHHHHHhcCEEEEeCCcccC----CCCccCCCCCcccchhhhcCHHHHHHHHhCCCCCE
Confidence 8999999999999999999996 999999999999999865 5998411113689999999999999999996 999
Q ss_pred EEecccccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEE
Q 003674 649 TLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVK 728 (804)
Q Consensus 649 tlvpldvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~ 728 (804)
+++|||+|+++.++++.+++|.+.++.+.++|+.+++..+... +... ...+..+||++|++++.+| .++ .++..
T Consensus 206 ~~v~LdvT~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~g~~~hD~lA~a~~~~P-el~--~~~~~ 279 (326)
T PTZ00313 206 VLFSLDSTNSVPVTSEVVKKFGAQNKYLLSQFVGSTWAMCTHH-ELLR--PGDGYYAWDVLTAAYVIER-NLA--ELEPV 279 (326)
T ss_pred EEeccccccceeCCHHHHHHHHhcCcchHHHHHHHHHhhhhhh-hhhc--CCCCCcCcHHHHHHHhcCh-heE--EEEEE
Confidence 9999999999999999999998765346888888876543211 1101 1124569999977654333 111 23455
Q ss_pred EEEEEEccCccccceEEEecCCCcceEEEEecCHHHHHHHHHHHHh
Q 003674 729 SIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANELN 774 (804)
Q Consensus 729 ~v~V~~~~~~~~~G~tvvd~~~~~~v~v~~~vD~~~f~~~l~~~L~ 774 (804)
+++|++++ +.++|+|+++..+.++++|+.++|.++|+++|.++|.
T Consensus 280 ~v~Ve~~~-~~t~G~tv~~~~~~~~~~V~~~vd~~~f~~~~~~~l~ 324 (326)
T PTZ00313 280 PLEVVVEK-AKNEGRTRRAAEGAACTYVAKNTNAELFYDMVLDSAR 324 (326)
T ss_pred EEEEEeCC-CCCCceEEeCCCCCCceEEEecCCHHHHHHHHHHHHh
Confidence 67777765 5799999997655677999999999999999999874
No 11
>PF01156 IU_nuc_hydro: Inosine-uridine preferring nucleoside hydrolase; InterPro: IPR001910 Inosine-uridine preferring nucleoside hydrolase (3.2.2.1 from EC) (IU-nucleoside hydrolase or IUNH) is an enzyme first identified in protozoan [] that catalyses the hydrolysis of all of the commonly occuring purine and pyrimidine nucleosides into ribose and the associated base, but has a preference for inosine and uridine as substrates. This enzyme is important for these parasitic organisms, which are deficient in de novo synthesis of purines, to salvage the host purine nucleosides. IUNH from Crithidia fasciculata has been sequenced and characterised, it is an homotetrameric enzyme of subunits of 34 Kd. An histidine has been shown to be important for the catalytic mechanism, it acts as a proton donor to activate the hypoxanthine leaving group. A highly conserved region located in the N-terminal extremity contains four conserved aspartates that have been shown [] to be located in the active site cavity. IUNH is evolutionary related to a number of uncharacterised proteins from various biological sources. This entry represents the structural domain of IUNH.; PDB: 1EZR_D 2MAS_B 1MAS_A 3MKM_C 3MKN_C 2C40_A 3T8J_A 2FF2_B 1KIE_A 2FF1_A ....
Probab=100.00 E-value=3.5e-53 Score=461.02 Aligned_cols=301 Identities=32% Similarity=0.426 Sum_probs=227.4
Q ss_pred CCcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcC-CCCCeEeecCCcccCCCCCC
Q 003674 415 GKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMG-RDDVQVGLGDLFATNQSDPI 492 (804)
Q Consensus 415 ~~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~G-r~dIPV~~Ga~~pl~~~~~~ 492 (804)
++|||||||+|+||++||++||.+| +++|+||| |+||...+++ ++|++++|+++| +.+||||.|+.+|+..+
T Consensus 1 ~~~viiDtD~g~DD~~Al~~~l~~~--~i~i~gIt~~~Gn~~~~~~-~~n~~~~l~~~g~~~~iPV~~G~~~pl~~~--- 74 (312)
T PF01156_consen 1 MKKVIIDTDPGIDDALALALALASP--EIEILGITTVFGNVSVEQA-ARNALRLLELAGGRDDIPVYKGADRPLVRP--- 74 (312)
T ss_dssp -EEEEEEE--SHHHHHHHHHHHHHT--TEEEEEEEE-SSSS-HHHH-HHHHHHHHHHTTTCSTS-EEEEESS-SSSS---
T ss_pred CcEEEEECCCChhHHHHHHHHHhCC--CcEEEEEEEecCCcchHHH-HHHHHHHHHHhcCCCccceeecchhhhhcc---
Confidence 5799999999999999999999999 89999999 6899887765 678999999996 77899999999999642
Q ss_pred CCCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCC
Q 003674 493 DPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGS 571 (804)
Q Consensus 493 ~p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~ 571 (804)
..+ ....||.+||++.. +|+... .+...++.|.+ +|++++ ++++
T Consensus 75 ------~~~-~~~~~g~~gl~~~~--------~~~~~~-----------------~~~~~~~~a~~---~i~~~~~~~~~ 119 (312)
T PF01156_consen 75 ------PEY-APEIHGEDGLGDAS--------LPEPED-----------------EPYPSDEDAVD---FIIELLKAYPG 119 (312)
T ss_dssp ------HHH-HHHHHTTTSSTSS---------HHSSSC-----------------HCHBHSSBHHH---HHHHHHHHSSS
T ss_pred ------ccc-hhhcccccCCCccc--------Cccccc-----------------ccccccccHHH---HHHHHHHhcCC
Confidence 122 23469999998852 333110 00011234554 333333 4677
Q ss_pred cEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEe
Q 003674 572 KITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLI 651 (804)
Q Consensus 572 ~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlv 651 (804)
+||||++|||||||.|++++|++.++|++||+|||++.. .||+. +.+|||+++||+||++||+|++|++++
T Consensus 120 ~vtiva~GplTNlA~al~~~P~~~~~i~~iviMGG~~~~----~Gn~~-----~~aE~N~~~DP~AA~~Vl~s~~~i~~v 190 (312)
T PF01156_consen 120 EVTIVAIGPLTNLALALRRDPEIAKKIKRIVIMGGAFDG----PGNVT-----PVAEFNFYCDPEAAQIVLESGIPITLV 190 (312)
T ss_dssp TEEEEECS-SHHHHHHHHHHGGHHGGEEEEEEE---SSS------SSS-----SSC-HHHHHSHHHHHHHHCSSS-EEEE
T ss_pred cEEEEecCcchhHHHHHHhChHHHhhceEEEEECCcccc----CCCCC-----ccCCcCcccCHHHHHHHhhcCCCeEEE
Confidence 899999999999999999999999999999999999986 59974 689999999999999999999999999
Q ss_pred cccccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccc----eEE
Q 003674 652 PLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT----VQV 727 (804)
Q Consensus 652 pldvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~----~~~ 727 (804)
|||+|+++.++++.+++|.+...+|.++|+.+++..+..+.++. ....++||++|++++ .++|+ ++.
T Consensus 191 pldvt~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~la~~~~-----~~~P~~~~~~~~ 261 (312)
T PF01156_consen 191 PLDVTHQVLLTPEFLDRLRAQSGSPLARFLRDLLRFYFDFYRDG----SDGFPLHDPLAAAYA-----ELDPELFTEFER 261 (312)
T ss_dssp -HHHHTTSEEEHHHHHHHHHTCTCHHHHHHHHHHHHHHHHHHHH----SSSEE-HHHHHHHHH------H-GGGEEEEEE
T ss_pred ecCccccccCCHHHHHHHHhcCcchHHHHHHHHHHHHHhhhhhc----cCCcccCCHHHHHHH-----HhCCccceecce
Confidence 99999999999999999998444899999999999887765422 225679999976653 04453 345
Q ss_pred EEEEEEEccCccccceEEEe---cCCCcceEEEEecCHHHHHHHHHHHHhc
Q 003674 728 KSIKVIAEGNEYKDGQTVID---KNQGIFVRVIENLDPEAYYDLFANELNS 775 (804)
Q Consensus 728 ~~v~V~~~~~~~~~G~tvvd---~~~~~~v~v~~~vD~~~f~~~l~~~L~~ 775 (804)
.+++|++++ +.++|++++| ...+++++|++++|.++|+++|+++|.+
T Consensus 262 ~~v~V~~~~-~~~~G~t~~d~~~~~~~~~~~v~~~vd~~~f~~~~~~~l~~ 311 (312)
T PF01156_consen 262 GPVDVETDG-GLTRGQTVVDREGSSGGPNVRVATDVDVDAFFDLLLERLAR 311 (312)
T ss_dssp EEEEEESSS-STTTTEEEEETTSTTSSECEEEEEEE-HHHHHHHHHHHHHH
T ss_pred EEEEEEECC-CCCCceEEEeccccCCCCcEEEeeecCHHHHHHHHHHHHhc
Confidence 567777764 5899999998 3567899999999999999999999875
No 12
>cd02654 nuc_hydro_CjNH nuc_hydro_CjNH. Nucleoside hydrolases similar to Campylobacter jejuni nucleoside hydrolase. This group contains eukaryotic and bacterial proteins similar to C. jejuni nucleoside hydrolase. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. C. jejuni nucleoside hydrolase is inactive against natural nucleosides or against common nucleoside analogues.
Probab=100.00 E-value=5.9e-52 Score=452.29 Aligned_cols=303 Identities=23% Similarity=0.286 Sum_probs=228.4
Q ss_pred cEEEecCCC----chHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCC
Q 003674 417 PVVFDMDMS----VGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDP 491 (804)
Q Consensus 417 kVIiDtD~G----~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~ 491 (804)
|||||||+| +||++||+|||.+| +++|+||| |+||++.+++ .+|++++|+.+||.+||||+|+.+||..+..
T Consensus 1 kvIiDtD~G~~~d~DDa~Al~lal~~p--~~el~gIt~v~GN~~~~~~-~~Na~~ll~~~g~~dIPV~~Ga~~pl~~~~~ 77 (318)
T cd02654 1 KVILDNDIAMGRDTDDGLALALLLWSP--EVELLGLSAVSGNCWLSAV-TYNVLRMLELAGADAIPVYAGANTPLGRTNR 77 (318)
T ss_pred CEEEEcCCCCCCCccHHHHHHHHhhCC--CceEEEEEEecCCCCHHHH-HHHHHHHHHHhCCCCCCEEECCCccccCCcc
Confidence 699999999 99999999999999 89999999 7999998877 4789999999999999999999999976431
Q ss_pred CCCCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCC
Q 003674 492 IDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPG 570 (804)
Q Consensus 492 ~~p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~ 570 (804)
.+ ......||.+|+++. .+|+....+..++ .. +...++ |. ++|++++ +++
T Consensus 78 ~~-------~~~~~~~G~~g~~~~--------~~p~~~~~~~~~~---------~~-~~~~~~-A~---~~i~~~~~~~p 128 (318)
T cd02654 78 AF-------HAWESLYGAYLWQGA--------WSPEYSDMYTNAS---------II-RNASIP-AA---LFMIEMVRKHP 128 (318)
T ss_pred cc-------ccccccCCCcccCCC--------CCCCccccccccc---------cC-CCCCcc-HH---HHHHHHHHhCC
Confidence 00 011235888887764 3454321111000 00 001122 33 3444444 466
Q ss_pred CcEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCC-cccccCCCcccccCCCCCHHHHHHHhhCCCcEE
Q 003674 571 SKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTG-NVFTVPLNKYAEFNMFLDPLAAKTVFESPLNIT 649 (804)
Q Consensus 571 ~~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~G-Nv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~it 649 (804)
++||||++|||||||+|++++|++.++||+||+|||++.. .| |+.+ .+.||||||+|||||++||+|++|++
T Consensus 129 ~~itiva~GPLTNlA~al~~~P~~~~~i~~iviMGG~~~~----~g~~~~~---~~~aEfN~~~DPeAA~iVl~s~~~~~ 201 (318)
T cd02654 129 HEVSIVAAGPLTNLALALRIDPDFAPLAKELVIMGGYLDD----IGEFVNR---HYASDFNLIMDPEAASIVLTAPWKSI 201 (318)
T ss_pred CceEEEECCcHHHHHHHHHHChhHHHhCCEEEEeCCCccC----CCCcCCC---CCCcceeeccCHHHHHHHHhCCCCEE
Confidence 7999999999999999999999999999999999999854 24 5531 13799999999999999999999999
Q ss_pred EecccccccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEE-
Q 003674 650 LIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVK- 728 (804)
Q Consensus 650 lvpldvt~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~- 728 (804)
++|||+|+++.++++.++++ ++.++|+.++++++.+++...... ..+..+||++|++++.+| .++ +++..
T Consensus 202 ~v~ldvT~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~hD~lava~~~~P-~l~--~~~~~~ 272 (318)
T cd02654 202 TIPGNVTNRTCLTPEQIKAD-----DPLRDFIRETLDLPIDYAKEFVGT-GDGLPMWDELASAVALDP-ELA--TSSETF 272 (318)
T ss_pred EeCcccccceeCCHHHHhcc-----CHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCchHHHHHHHcCH-hHc--cceEeE
Confidence 99999999999999887744 567889999998877765432211 124579999976654333 222 23444
Q ss_pred EEEEEEccCccccceEEEecCC-------CcceEEEEecCHHHHHHHH
Q 003674 729 SIKVIAEGNEYKDGQTVIDKNQ-------GIFVRVIENLDPEAYYDLF 769 (804)
Q Consensus 729 ~v~V~~~~~~~~~G~tvvd~~~-------~~~v~v~~~vD~~~f~~~l 769 (804)
+|+|++.+ .++|+|++|+.. .+|++|+.++|.++|+++|
T Consensus 273 ~v~Ve~~~--~~~G~tv~d~~~~~~~~~~~~n~~v~~~vD~~~f~~~~ 318 (318)
T cd02654 273 YIDVQTDS--DGGGQLIWPEDLLLAKGLRPYHVKVITAVDVAAFLNLI 318 (318)
T ss_pred EEEEEeCC--CcCCeEEeecccCCCCCCCCCCCEEeecccHHHHHhhC
Confidence 77887654 389999998642 2589999999999999874
No 13
>cd02647 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. Nucleoside hydrolases vary in their substrate specificity. This group contains eukaryotic and bacterial proteins similar to the purine specific inosine-adenosine-guanosine-preferring nucleoside hydrolase (IAG-NH) from T. vivax. T. vivax IAG-NH is of the order of a thousand to ten thousand fold more specific towards the naturally occurring purine nucleosides, than towards the pyrimidine nucleosides.
Probab=100.00 E-value=4.4e-51 Score=443.53 Aligned_cols=298 Identities=33% Similarity=0.469 Sum_probs=226.9
Q ss_pred CcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-E--eCCCCchHHHHHHHHHHHHHcCC-CCCeEeecCCcccCCCCC
Q 003674 416 KPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-V--SPTGWANAATIDVIYDLLHMMGR-DDVQVGLGDLFATNQSDP 491 (804)
Q Consensus 416 ~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v--~Gn~~~~~a~~~~~~~vL~~~Gr-~dIPV~~Ga~~pl~~~~~ 491 (804)
||||||||+|+||++||+|||++| +++|+||| | +||.+.+++ .+|++++|+.+|| .+||||+|+..||..
T Consensus 1 ~~vIiDtD~g~DDa~Al~~al~~p--~i~l~gIt~v~~~GN~~~~~~-~~na~~ll~~~g~~~dIPV~~Ga~~pL~~--- 74 (312)
T cd02647 1 KNVIFDHDGNVDDLVALLLLLKNE--KVDLKGIGVSGIDADCYVEPA-VSVTRKLIDRLGQRDAIPVGKGGSRAVNP--- 74 (312)
T ss_pred CCEEEeCCCCchHHHHHHHHhhCC--CcceEEEEEecCcCCccHHHH-HHHHHHHHHHhCCCCCCCEEeCCCcCccc---
Confidence 689999999999999999999999 99999999 6 699987765 5789999999999 899999999999943
Q ss_pred CCCCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCC
Q 003674 492 IDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPG 570 (804)
Q Consensus 492 ~~p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~ 570 (804)
++. ....|+.+|+++. |.....+..+ .+ .....|. ++|++++ +++
T Consensus 75 -~~~-------~~~~~~~~g~~~~----------~~~~~~~~~~------------~~-~~~~~a~---~~i~~~~~~~~ 120 (312)
T cd02647 75 -FPR-------SWRRDAAFSVDHL----------PILNERYTVE------------TP-LAEETAQ---LVLIEKIKASL 120 (312)
T ss_pred -Ccc-------ccccccccCcCcC----------CCCccccCCC------------CC-cCcchHH---HHHHHHHHhCC
Confidence 110 0113665665432 2211000000 00 0111233 4455544 456
Q ss_pred CcEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEE
Q 003674 571 SKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITL 650 (804)
Q Consensus 571 ~~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itl 650 (804)
++||||++|||||||+|++++|++.++|++||+|||++.. +||++..+.++.||||+|+||+||++||+|++|+++
T Consensus 121 ~~vtiva~GPLTNlA~al~~~P~~~~~i~~iviMGG~~~~----~GN~~~~~~tp~aEfNi~~DPeAA~iV~~s~~~i~~ 196 (312)
T cd02647 121 EPVTLLVTGPLTNLARALDSDPDISSNIEEVYIMGGGVDA----PGNVFTPPSNGTAEFNIFWDPLAAKTVFDSGLKITL 196 (312)
T ss_pred CCEEEEEcccHHHHHHHHHHChHHHhhcCEEEEeCCccCC----CCccccCCCCCCcccccccCHHHHHHHHhCCCCEEE
Confidence 8999999999999999999999999999999999999975 599854444678999999999999999999999999
Q ss_pred ecccccccccCCHH----HHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceE
Q 003674 651 IPLGVQRKVSSFPK----ILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQ 726 (804)
Q Consensus 651 vpldvt~~~~~t~~----~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~ 726 (804)
+|||+|+++.++++ +++++.+.+ +|.++|+.+++.+|.++. ...+..+||+++++++.+| ... .++
T Consensus 197 vpldvt~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~g~~~hD~lava~~~~p-~~~--~~~ 266 (312)
T cd02647 197 VPLDATNTVPLTREFLETDRQRFAAQR-LPASDLAGQGYALVKPLE------FNSTYYMWDVLTTLVLGAK-EVD--NTK 266 (312)
T ss_pred EccccccccccCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHhhhc------CCCCccccHHHHHHHHcCc-hhc--ccc
Confidence 99999999999999 566677655 799999999999887653 1124568999976654333 111 234
Q ss_pred EEE-EEEEEccCccccceEEEecCCCcceEEEEecCHHHHHHHHHH
Q 003674 727 VKS-IKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFAN 771 (804)
Q Consensus 727 ~~~-v~V~~~~~~~~~G~tvvd~~~~~~v~v~~~vD~~~f~~~l~~ 771 (804)
..+ ++|++++ .++|+|++|.. ++|++|+.++|.+. ...+++
T Consensus 267 ~~~~v~Ve~~g--~t~G~Tv~d~~-~~n~~v~~~vd~~~-~~~~~~ 308 (312)
T cd02647 267 ESLILEVDTDG--LSAGQTVTSPN-GRPLTLVTSNNSYG-SNRFFD 308 (312)
T ss_pred cccceEEEECC--CCCceEEEcCC-CCCeEEEEeeCccc-chhhhh
Confidence 455 7888876 49999999975 58999999999987 344433
No 14
>cd00455 nuc_hydro nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium, the purine-specific inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax and, pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases such as URH1 from Saccharomyces cerevisiae, RihA and RihB from Escherichia coli. Nucleoside hydrolases are of interest as a target for antiprotozoan drugs as, no nucleoside hydrolase activity or genes encoding these enzymes have been detected in humans and, parasitic protozoans lack de novo purine synthesis relying on nucleosid
Probab=100.00 E-value=2e-50 Score=436.37 Aligned_cols=290 Identities=27% Similarity=0.325 Sum_probs=228.7
Q ss_pred EEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCCCCC
Q 003674 418 VVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDPSV 496 (804)
Q Consensus 418 VIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~p~~ 496 (804)
||||||+|+||++||+|||.+| +++|+||| |+||.+.+++ ++|++++|+++|+.+||||+|+..|+..+..
T Consensus 1 vIiDtD~g~DDa~Al~~~l~~~--~~~l~gIt~~~Gn~~~~~~-~~n~~~~l~~~g~~~iPV~~G~~~pl~~~~~----- 72 (295)
T cd00455 1 VILDTDPGIDDAFALMYALLHP--EIELVGIVATYGNVTLEQA-TQNAAYLLELLGRLDIPVYAGATRPLTGEIP----- 72 (295)
T ss_pred CEEeCCCCHHHHHHHHHHhcCC--CceEEEEEeccCCccHHHH-HHHHHHHHHHhCCCCCCEeCCCCCCCCCCCC-----
Confidence 6999999999999999999998 89999999 7899987765 6889999999999999999999999965421
Q ss_pred CCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-CCCCcEEE
Q 003674 497 GDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-EPGSKITL 575 (804)
Q Consensus 497 ~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~~~~~vtI 575 (804)
......||.+|.+. .++... ....+.|. ++|++++ +++++|+|
T Consensus 73 ----~~~~~~~g~~g~~~----------~~~~~~-------------------~~~~~~a~---~~i~~~~~~~~~~v~i 116 (295)
T cd00455 73 ----AAYPEIHGEGGLGL----------PIPPII-------------------EADDPEAV---QLLIDLIRKYPDEITI 116 (295)
T ss_pred ----CCCcccCCCCCCCC----------CCCCCC-------------------cCCCcCHH---HHHHHHHHhcCCCeEE
Confidence 11233588777311 111100 01122344 3444444 35568999
Q ss_pred EEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEecccc
Q 003674 576 LTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIPLGV 655 (804)
Q Consensus 576 la~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlvpldv 655 (804)
|++|||||||+|++++|++.++||+||+|||++.. .||++ +.+|||+++||+||++||+|+++++++|||+
T Consensus 117 la~GplTNlA~al~~~p~~~~~i~~iviMGG~~~~----~Gn~~-----~~aEfN~~~DP~AA~~Vl~s~~~i~~vpldv 187 (295)
T cd00455 117 VALGPLTNLAMAFILDPDIKDRVKEIVIMGGAFLV----PGNVT-----PVAEANFYGDPEAANIVFNSAKNLTIVPLDV 187 (295)
T ss_pred EECCchHHHHHHHHHChHHHHhCCEEEEcCCccCC----CCCCC-----ccchhhcccCHHHHHHHHhCCCCeEEecccc
Confidence 99999999999999999999999999999999854 59986 5799999999999999999999999999999
Q ss_pred cccccCCHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHhccccccccccccceeeEEEEeccccccccceEEEEEEEEEc
Q 003674 656 QRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPTVQVKSIKVIAE 735 (804)
Q Consensus 656 t~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~laAv~la~~~~~l~p~~~~~~v~V~~~ 735 (804)
|+++.++++.+++|.+.+ ++.++|+.+++.++....+. +...+..+||++|++++..| ... .++..+++|+++
T Consensus 188 t~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~lAv~~~~~P-~~~--~~~~~~v~V~~~ 260 (295)
T cd00455 188 TNQAVLTPPMVERIFEQG-TSIGLLIKPMIDYYYKAYQK---PGIEGSPIHDPLAVAYLLNP-SMF--DYSKVPVDVDTD 260 (295)
T ss_pred eeeEeCCHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHhc---CCCCcCCCChHHHHHHhcCc-ccE--EEEEEeEEEEeC
Confidence 999999999999998765 78999999998887765433 12224579999976654333 111 234556777776
Q ss_pred cCccccceEEEecCC---CcceEEEEecCHHHHHHHH
Q 003674 736 GNEYKDGQTVIDKNQ---GIFVRVIENLDPEAYYDLF 769 (804)
Q Consensus 736 ~~~~~~G~tvvd~~~---~~~v~v~~~vD~~~f~~~l 769 (804)
+ .++|+|++|+.+ .++++|+.++|.++|+++|
T Consensus 261 g--~~~G~t~~d~~~~~~~~~~~v~~~~d~~~f~~~~ 295 (295)
T cd00455 261 G--LTRGQTIADFRENPGNGVTRVAVNLDYPDFIELI 295 (295)
T ss_pred C--CCCceEEEecccCCCCCCcEEEEecCHHHHHhhC
Confidence 5 799999999764 3689999999999999864
No 15
>cd02648 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrolases. This group contains fungal proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=100.00 E-value=2.6e-48 Score=423.65 Aligned_cols=295 Identities=22% Similarity=0.295 Sum_probs=211.9
Q ss_pred CCcEEEecCCCchHHHHHHHHHhCCCCc-eeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCC------------------
Q 003674 415 GKPVVFDMDMSVGDFLALFYLLKAPVEV-INLKAIL-VSPTGWANAATIDVIYDLLHMMGRD------------------ 474 (804)
Q Consensus 415 ~~kVIiDtD~G~DDalAL~~aL~~p~~~-i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~------------------ 474 (804)
++|||||||+|+||++||+|||.+| + ++|+||| |+||+..+++ .+|++++|+++||.
T Consensus 1 p~kiIiDtDpG~DDa~AillAl~~p--~~~ev~gITtv~GN~~~~~~-~~Nal~~l~~~gr~~~~~~~~~~~~~~~~~~~ 77 (367)
T cd02648 1 PHPIIIDTDPGVDDVLAILLALSSP--EEVDVALISLTFGNTTLDHA-LRNVLRLFHVLERERAWRATPGVRYRAFSADA 77 (367)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCC--CCcEEEEEEecCCCcCHHHH-HHHHHHHHHHhCCcccccccccccccccccCC
Confidence 3689999999999999999999999 7 9999999 7999998876 57899999999997
Q ss_pred CCe-EeecCCcccCCCCCCCCCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCc
Q 003674 475 DVQ-VGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQ 553 (804)
Q Consensus 475 dIP-V~~Ga~~pl~~~~~~~p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~ 553 (804)
+|| ||.|+.+||..+.. . ...+||.+||++.. .+++... .. ++. .|.-...-....
T Consensus 78 ~iP~V~~Ga~~PL~~~~~---------~-a~~~HG~dGlgg~~-------~~~p~~~-p~-~~~----~~~~~~~~~~~~ 134 (367)
T cd02648 78 EKPIVASGSDQPLEGERL---------T-ASYFHGRDGLSGVH-------WLHPDFT-PV-ETW----IPEIVAPLTPSD 134 (367)
T ss_pred CCCEEEcCCCcccCCCCc---------c-cCccCCCCCCCCcc-------ccCCccc-cc-ccc----ccccccccCcCC
Confidence 699 99999999966421 1 23469999998862 1211100 00 000 000000000011
Q ss_pred hhHHHHHHHHHhhc--CCCCcEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCC
Q 003674 554 PLALEIWDSTTSTL--EPGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNM 631 (804)
Q Consensus 554 p~A~~~~~~i~~~~--~~~~~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~ 631 (804)
..|. ++|++++ .++++|+||++|||||||+|++++|++.++|++||+|||++.. .||++ +.+|||+
T Consensus 135 ~~A~---~~i~~~~~~~p~~~itivalGPLTNiA~al~~~P~~~~~Ik~IviMGG~~~~----~GN~t-----p~aEfNi 202 (367)
T cd02648 135 KPAY---DVILDILREEPDHTVTIAALGPLTNLAAAARKDPETFAKVGEVVVMGGAIDV----PGNTS-----PVAEFNC 202 (367)
T ss_pred ccHH---HHHHHHHHhCCCCcEEEEEcccHHHHHHHHHHChHHHhhhcEEEEeCCcccC----CCCCC-----ccchhhc
Confidence 1243 4444444 2345799999999999999999999999999999999999864 59986 5899999
Q ss_pred CCCHHHHHHHhhC----------CCcEEEecccccccccCCHHHH-----HHHHh--cCCChHHHHHHHHHH-----HHH
Q 003674 632 FLDPLAAKTVFES----------PLNITLIPLGVQRKVSSFPKIL-----RRLCL--KNKTPEAQFAQHLLS-----RLS 689 (804)
Q Consensus 632 ~~DPeAA~~Vl~s----------~~~itlvpldvt~~~~~t~~~l-----~~L~~--~~~tp~a~~l~~ll~-----~~~ 689 (804)
|+||+||++||++ +++++|+|||+|+++.++.+.+ +.++. .+ ++.++|+.+++. ++.
T Consensus 203 ~~DPeAA~iV~~~~~~~~~~s~~~~~i~mvpLDvT~~~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 281 (367)
T cd02648 203 FADPYAAAVVIDEPPSTAPEARRKLPLQVFPLDITTGHTLPYSSLFATYVTPRDAPERG-SPLARWLEHVFISTFLTHPR 281 (367)
T ss_pred ccCHHHHHHHHhccccccccccCCCCeEEEeecCCCCeeeCHHHhhhhHHHHHHhhccC-CchHHHHHHHHHHHHHHHHH
Confidence 9999999999984 5699999999999999998764 44554 33 789997665544 666
Q ss_pred HHHHhccccccc-cccccceeeEEEEeccccc-----ccc-ce--EEEEEEEEEccCccccceEEEecCC
Q 003674 690 HLQQTHYRYHHM-EIFLGEILGAVALAGDNSL-----LKP-TV--QVKSIKVIAEGNEYKDGQTVIDKNQ 750 (804)
Q Consensus 690 ~~~~~~~~~~~~-d~~l~D~laAv~la~~~~~-----l~p-~~--~~~~v~V~~~~~~~~~G~tvvd~~~ 750 (804)
+++.+.....+. ...+||++|++++.++ .+ .++ .| +..+++||+++ +.+||+||+|+..
T Consensus 282 ~~~~~~~~~~g~~~~~lHD~lava~~i~p-~~~~~~~~~~~~~~~~~~~v~Ve~~g-~~trG~tV~D~~~ 349 (367)
T cd02648 282 AFTPEEFLPDRSELFEMHDPLAVWYAIFA-DMPATGSIDGNGWKHTPRDFRVETSG-QWTRGMCVVDRRG 349 (367)
T ss_pred HHHHhhcCCCCccCCCCCcHHHhHhhcCc-ccccccccccceEEEEEecEEEEeCC-CCCCceEEEecCC
Confidence 554432211111 1259999976665544 21 011 13 45568888876 6899999999653
No 16
>COG1957 URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.6e-47 Score=406.36 Aligned_cols=218 Identities=28% Similarity=0.419 Sum_probs=198.6
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
.+||.|||||.|+.+||++...+++ ++||.+||++..+|.+.++
T Consensus 55 ~~g~~~iPV~~Ga~~Pl~r~~~~a~---------------------------------~iHG~~Gl~~~~lp~~~~~--- 98 (311)
T COG1957 55 LLGRADIPVYAGAARPLLREPITAP---------------------------------EIHGESGLGGPELPEPTRK--- 98 (311)
T ss_pred HcCCCCCCeecCCCCCcCCCCcchh---------------------------------hhcCCcCCCCCCCCccccc---
Confidence 3789999999999999998865433 5677888988888887664
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
++..+|+++|+|+++ +|+|||+++|||||||+|++++|++.++||+||||||++..+
T Consensus 99 ~~~~~A~~~ii~~l~~~~g~vtlva~GPLTNiAlAl~~~P~i~~~ik~iviMGGa~~~~--------------------- 157 (311)
T COG1957 99 LESKHAVDAIIDTLMANPGEVTLVATGPLTNIALALRKDPEIAKRIKEIVIMGGAFFVP--------------------- 157 (311)
T ss_pred ccCCcHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhCcchhhhhcEEEEecCccCCC---------------------
Confidence 345899999999997 799999999999999999999999999999999999999875
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHhhh
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWL 238 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~~ 238 (804)
||+ +|.||||||+|||||++||+||+|++|||||+|+|+..+++.+.++.+. +++.++++.+++.++.+++.
T Consensus 158 -GNv------tp~AEfNi~~DPeAA~iVf~sg~~i~mv~LdvT~q~~~t~~~~~~~~~~-~~~~~~~~~d~l~~~~~~~~ 229 (311)
T COG1957 158 -GNV------TPAAEFNIWVDPEAAKIVFTSGWPITMVPLDVTHQVLLTPDVLARLRAA-GGPAAELVADLLDFYLAYYK 229 (311)
T ss_pred -CCc------CcchhhhhccCHHHHHHHHhCCCceEEechhhhhhhcCCHHHHHHHHHh-CCccHHHHHHHHHHHHHHHh
Confidence 997 9999999999999999999999999999999999999999999999987 56778999999999999888
Q ss_pred cccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCc-cccccC
Q 003674 239 NDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNK-PYGISD 294 (804)
Q Consensus 239 ~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~-~~G~~~ 294 (804)
..++..+.++||++|++++++| +++++++++|+||+.|. ++|++.
T Consensus 230 ~~~g~~g~~~hD~~a~a~l~~p-----------~l~~~~~~~V~Ve~~~~lt~G~Tv 275 (311)
T COG1957 230 SRQGLDGAPLHDPLAVAYLLDP-----------ELFTTREANVDVETAGGLTRGMTV 275 (311)
T ss_pred hccCCCCCCcccHHHHHHHhCh-----------hhhcceEEEEEEEeCCCCcCcceE
Confidence 7767789999999999999999 99999999999999995 699974
No 17
>PRK09955 rihB ribonucleoside hydrolase 2; Provisional
Probab=100.00 E-value=3.8e-45 Score=397.49 Aligned_cols=216 Identities=23% Similarity=0.343 Sum_probs=192.1
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++|| |||||.||+.||++.... ..++||.+|||+..+|++...
T Consensus 56 ~~g~-~IPV~~Ga~~PL~~~~~~---------------------------------~~~~HG~~Glg~~~~~~~~~~--- 98 (313)
T PRK09955 56 KLEI-NVPVYAGMPQPIMRQQIV---------------------------------ADNIHGETGLDGPVFEPLTRQ--- 98 (313)
T ss_pred HhCC-CCCEEeCCCCCCCCCCCC---------------------------------ccccCCCCCCCCCCCCCcccc---
Confidence 3686 799999999999875311 235899999999888876543
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.++++|+++|+++++ +++||||++|||||||+|++++|++.++||+||||||++. .
T Consensus 99 ~~~~~A~~~i~~~~~~~p~eitiva~GPLTNlA~al~~~P~~~~~i~~iviMGG~~~-~--------------------- 156 (313)
T PRK09955 99 AESTHAVKYIIDTLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYG-T--------------------- 156 (313)
T ss_pred cCCCcHHHHHHHHHHhCCCCEEEEEcCcHHHHHHHHHHChHHHHhCCEEEEeCCCCC-C---------------------
Confidence 456789999999996 7899999999999999999999999999999999999984 2
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHhhh
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWL 238 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~~ 238 (804)
||+ +|.||||||+|||||++||+|++|++|+|||+|+++.++++++++|.+. +++.++++.+++++|.+.+.
T Consensus 157 -GN~------tp~aEfN~~~DPeAA~iV~~s~~~i~~v~lDvT~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 228 (313)
T PRK09955 157 -GNF------TPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERA-GGPAGELFSDIMNFTLKTQF 228 (313)
T ss_pred -CCC------CCCeeeccccCHHHHHHHHhCCCCEEEeccccccceecCHHHHHHHHhc-CChHHHHHHHHHHHHHHHHH
Confidence 997 9999999999999999999999999999999999999999999999875 57899999999999887765
Q ss_pred cccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCc-cccccC
Q 003674 239 NDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNK-PYGISD 294 (804)
Q Consensus 239 ~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~-~~G~~~ 294 (804)
...+..++++||++|++++++| ++++.+.++++||+.|. +||++.
T Consensus 229 ~~~g~~g~~lhD~la~a~~~~P-----------~l~~~~~~~v~Ve~~g~~t~G~tv 274 (313)
T PRK09955 229 ENYGLAGGPVHDATCIGYLINP-----------DGIKTQEMYVEVDVNSGPCYGRTV 274 (313)
T ss_pred hhcCCCCCccChHHHHHHHcCh-----------hhEEEEEeeEEEEeCCCCCCceEE
Confidence 5555678999999999999999 99999999999999876 699985
No 18
>PLN02717 uridine nucleosidase
Probab=100.00 E-value=9.2e-45 Score=395.51 Aligned_cols=221 Identities=25% Similarity=0.299 Sum_probs=195.6
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||+|++.||++.... .....+||.||||+..+|.+.. +
T Consensus 53 ~~g~~diPV~~Ga~~pl~~~~~~-------------------------------~~~~~~hG~dGlg~~~~p~~~~---~ 98 (316)
T PLN02717 53 MAGRPDVPVAEGSHEPLKGGTKP-------------------------------RIADFVHGSDGLGNTNLPPPKG---K 98 (316)
T ss_pred HcCCCCCCEEeCCCCCCCCCCCC-------------------------------cCCccCCCCCCCCCCCCCCCCC---C
Confidence 47999999999999999874200 0123689999999998887654 3
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.+.++|+++|+++++ +++||||++|||||||+|++++|++.++||+||||||++...
T Consensus 99 ~~~~~A~~~i~~~~~~~~~~itiva~GPLTNlA~al~~~P~~~~~ik~iviMGG~~~~~--------------------- 157 (316)
T PLN02717 99 KIEKSAAEFLVEKVSEYPGEVTVVALGPLTNLALAIKLDPSFAKKVGQIVVLGGAFFVN--------------------- 157 (316)
T ss_pred cCCCCHHHHHHHHHHhCCCCEEEEECCcHHHHHHHHHHChHHHhhcCEEEEeCCCcCCC---------------------
Confidence 456899999999997 689999999999999999999999999999999999998764
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHhhh
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWL 238 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~~ 238 (804)
||+ +|.||||||+|||||++||+|++|++|+|||+|+++.++.++++++.+. +++.++|+.+++++|++.+.
T Consensus 158 -GN~------tp~aEfN~~~DPeAA~iVl~s~~~i~~v~ldvt~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 229 (316)
T PLN02717 158 -GNV------NPAAEANIFGDPEAADIVFTSGADITVVGINVTTQVVLTDADLEELRDS-KGKYAQFLCDICKFYRDWHR 229 (316)
T ss_pred -CCC------CchhhhhhhcCHHHHHHHHhCCCCeEEEcccccCceecCHHHHHHHHHc-CChHHHHHHHHHHHHHHHHH
Confidence 997 8999999999999999999999999999999999999999999999875 56889999999999888766
Q ss_pred cccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCccccccCC
Q 003674 239 NDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDG 295 (804)
Q Consensus 239 ~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~~~G~~~g 295 (804)
..++..++++||++|++++++| ++++.++.+++||++|.+||++..
T Consensus 230 ~~~~~~~~~~~D~la~a~~~~P-----------~~~~~~~~~v~Ve~~g~trG~tv~ 275 (316)
T PLN02717 230 KSYGIDGIYLHDPTALLAAVRP-----------SLFTYKEGVVRVETEGICRGLTLF 275 (316)
T ss_pred hhcCCCcccCCcHHHhHHhcCc-----------cceEEEEecEEEEeCCCCCceEee
Confidence 5556678999999999999999 999999999999999878999753
No 19
>cd02651 nuc_hydro_IU_UC_XIUA nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine a
Probab=100.00 E-value=3.6e-44 Score=389.05 Aligned_cols=216 Identities=28% Similarity=0.424 Sum_probs=191.8
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||+|++.||.++... ..++||.||||+..+|++.+.
T Consensus 52 ~~g~~diPV~~Ga~~pl~~~~~~---------------------------------~~~~hG~~Gl~~~~~p~~~~~--- 95 (302)
T cd02651 52 LLGRTDVPVAAGAARPLVRPLIT---------------------------------ASDIHGESGLDGADLPPPPRR--- 95 (302)
T ss_pred HhCCCCCcEEcCCCcCcCCCCCC---------------------------------CcCCCCCCCCCCCCCCCCCCC---
Confidence 47999999999999999875321 235899999999988876553
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.+.++|+++|+++++ +++||||++|||||||+|++++|++.++||+||||||++ ..
T Consensus 96 ~~~~~a~~~i~~~~~~~~~evtiva~GPLTNlA~al~~~P~~~~~ik~iviMGG~~-~~--------------------- 153 (302)
T cd02651 96 PEDIHAVDAIIDTLRASPEPITLVATGPLTNIALLLRKYPELAERIKEIVLMGGAL-GR--------------------- 153 (302)
T ss_pred cCCCcHHHHHHHHHHhCCCCEEEEEcCchHHHHHHHHHChhhHhhcCEEEEecCCc-CC---------------------
Confidence 356799999999997 689999999999999999999999999999999999998 33
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHhhh
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWL 238 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~~ 238 (804)
||+ +|.||||||+|||||++||+|++|+++||||+|+++.++++++++|.+. +++.++|+.+++++|.+.|.
T Consensus 154 -GN~------tp~aEfN~~~DPeAA~~Vl~s~~~i~~v~ldvt~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 225 (302)
T cd02651 154 -GNI------TPAAEFNIFVDPEAAKIVFNSGIPITMVPLDVTHKALATPEVIERIRAL-GNPVGKMLAELLDFFAETYG 225 (302)
T ss_pred -CCC------ChHHHhhcccCHHHHHHHHhCCCCeEEeccceeeeeccCHHHHHHHHHc-CChHHHHHHHHHHHHHHHHH
Confidence 997 9999999999999999999999999999999999999999999999875 57899999999998887665
Q ss_pred cccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCc-cccccC
Q 003674 239 NDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNK-PYGISD 294 (804)
Q Consensus 239 ~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~-~~G~~~ 294 (804)
... ..++++||++|++++++| ++++.++++++|+++|. +||++.
T Consensus 226 ~~~-~~~~~l~D~la~~~~~~p-----------~~~~~~~~~v~Ve~~g~~~rG~tv 270 (302)
T cd02651 226 SAF-TEGPPLHDPCAVAYLLDP-----------ELFTTKRANVDVETEGELTRGRTV 270 (302)
T ss_pred hhc-cCCCCCCcHHHhHHhcCc-----------cceEEEEeeEEEEcCCCCCCceEE
Confidence 433 468999999999999999 99999999999999985 699974
No 20
>cd02650 nuc_hydro_CaPnhB NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB). Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=100.00 E-value=1.1e-43 Score=385.70 Aligned_cols=220 Identities=24% Similarity=0.330 Sum_probs=195.8
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||+|++.||..... ....++||.||||+..+|++...
T Consensus 52 ~~g~~diPV~~G~~~pl~~~~~--------------------------------~~~~~~hg~dGlg~~~~p~~~~~--- 96 (304)
T cd02650 52 LFGRPDVPVAEGAAKPLTRPPF--------------------------------RIATFVHGDNGLGDVELPAPPRQ--- 96 (304)
T ss_pred HhCCCCCCEEcCCCCCCCCCCc--------------------------------CCcCCCCCCCCCCCCCCCCCCCC---
Confidence 4799999999999999987532 01346899999999988876653
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.++++|+++|+++++ +++||||++|||||||+|++++|++.++||+||||||++...
T Consensus 97 ~~~~~A~~~l~~~~~~~~~~vtivaiGPLTNlA~al~~~P~i~~~ik~iviMGG~~~~~--------------------- 155 (304)
T cd02650 97 PEDESAADFLIELANEYPGELTLVAVGPLTNLALALARDPDFAKLVKQVVVMGGAFTVP--------------------- 155 (304)
T ss_pred cCccCHHHHHHHHHHhCCCCeEEEECCcHHHHHHHHHHCcHHHhhcCEEEEeCccccCC---------------------
Confidence 356799999999997 689999999999999999999999999999999999999754
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHhhh
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWL 238 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~~ 238 (804)
||+ +|.||||||+||+||++||+|++|++++|||+|+++.+++++++++.+. +++.++|+.+++++|.+.+.
T Consensus 156 -GN~------~p~aEfN~~~DP~AA~iVl~s~~~i~~vpldvt~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 227 (304)
T cd02650 156 -GNV------TPAAEANIHGDPEAADIVFTAGADLTMVGLDVTTQTLLTREDLDELRDS-GGKAGQFLADMLDYYIDFYQ 227 (304)
T ss_pred -CCC------CchHHhhcccCHHHHHHHHhCCCCeEEeCCceeeeEecCHHHHHHHHhc-CChHHHHHHHHHHHHHHHHH
Confidence 997 8999999999999999999999999999999999999999999999875 57889999999999887666
Q ss_pred cccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCccccccCC
Q 003674 239 NDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISDG 295 (804)
Q Consensus 239 ~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~~~G~~~g 295 (804)
...+..++++||++|++++++| ++++.++++++|+++|.+||++.-
T Consensus 228 ~~~~~~g~~l~D~la~~~~~~P-----------~~~~~~~~~v~Ve~~g~~~G~tv~ 273 (304)
T cd02650 228 ESPGLRGCALHDPLAVAAAVDP-----------SLFTTREGVVRVETEGPTRGRTIG 273 (304)
T ss_pred hccCCCcccCCcHHHHHhhcCc-----------cceEEEEeeEEEEeCCCCCceEEE
Confidence 5445678999999999999999 999999999999999988999753
No 21
>cd02653 nuc_hydro_3 NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=100.00 E-value=1.5e-43 Score=386.49 Aligned_cols=217 Identities=22% Similarity=0.300 Sum_probs=191.2
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||+|++.||.+.... ..++||.+|||+..+|++.. +
T Consensus 52 ~~g~~dIPV~~Ga~~pl~~~~~~---------------------------------~~~~hG~dGlg~~~~p~~~~---~ 95 (320)
T cd02653 52 LLGRTDIPVYLGADKPLAGPLTT---------------------------------AQDTHGPDGLGYAELPASTR---T 95 (320)
T ss_pred HcCCCCCcEEeCCCccCCCCCCC---------------------------------cccccCCCCCCCCCCCCCCC---C
Confidence 47999999999999999875321 23589999999988887654 3
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.++++|+++|+++++ + +||||++|||||||+|++++|++.++||+||||||++...
T Consensus 96 ~~~~~A~~~i~~~~~~~~-eitiva~GPLTNlA~al~~~P~~~~~ik~iviMGG~~~~~--------------------- 153 (320)
T cd02653 96 LSDESAAQAWVDLARAHP-DLIGLATGPLTNLALALREEPELPRLLRRLVIMGGAFNSR--------------------- 153 (320)
T ss_pred CCCCCHHHHHHHHHHhCC-CeEEEECCchHHHHHHHHHChHHHHhcCEEEEECCCcCCC---------------------
Confidence 456899999999997 5 8999999999999999999999999999999999998754
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhC----CCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHH
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHS----GIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMAR 234 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~s----g~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~ 234 (804)
||+ +|.||||||+|||||++||++ ++|++|||||+|+++.+++++++++.+. +++.++|+.+++.+|.
T Consensus 154 -GN~------tp~aEfN~~~DPeAA~iVl~s~~~~~~~i~~vplDvt~~~~~t~~~~~~l~~~-~~~~~~~~~~~~~~~~ 225 (320)
T cd02653 154 -GNT------SPVAEWNYWVDPEAAKEVLAAFGGHPVRPTICGLDVTRAVVLTPNLLERLARA-KDSVGAFIEDALRFYF 225 (320)
T ss_pred -CCC------CcHhHHhhhcCHHHHHHHHhccccCCCCeEEeccccceeeecCHHHHHHHHhc-CChHHHHHHHHHHHHH
Confidence 997 899999999999999999998 6999999999999999999999999875 5678999999999888
Q ss_pred HhhhcccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCccccccC
Q 003674 235 DTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISD 294 (804)
Q Consensus 235 ~~~~~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~~~G~~~ 294 (804)
+++.......++++||++|++++++| ++++.++++++||++|..+|++.
T Consensus 226 ~~~~~~~~~~~~~lhD~lAva~~~~P-----------~l~~~~~~~v~Ve~~g~~~G~tv 274 (320)
T cd02653 226 EFHWAYGHGYGAVIHDPLAAAVALNP-----------NLARGRPAYVDVECTGVLTGQTV 274 (320)
T ss_pred HHHHhcCCCCCCCCChHHHHHHhcCh-----------hheEEEEeeEEEEeCCCCCceEE
Confidence 76554333457899999999999999 99999999999999998778874
No 22
>PRK10443 rihA ribonucleoside hydrolase 1; Provisional
Probab=100.00 E-value=4.2e-43 Score=381.68 Aligned_cols=217 Identities=24% Similarity=0.338 Sum_probs=192.3
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||+|++.||...... ..++||.+|+|+..+|.+.. +
T Consensus 55 ~~g~~diPV~~Ga~~pl~~~~~~---------------------------------~~~~hG~~Gl~~~~~p~~~~---~ 98 (311)
T PRK10443 55 LLNRTDIPVAGGAVKPLMRELII---------------------------------ADNVHGESGLDGPALPEPTF---A 98 (311)
T ss_pred HhCCCCCcEEeCCCCCCCCCCcC---------------------------------ccccCCCCCCCCCCCCCCcc---C
Confidence 47999999999999999764311 23578899999887776654 3
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.++++|+++|+++++ +|+||||++|||||||+|++++|++.++||+||||||++..
T Consensus 99 ~~~~~a~~~i~~~~~~~~~~itiva~GPLTNlA~al~~~P~~~~~i~~iviMGG~~~~---------------------- 156 (311)
T PRK10443 99 PQNCTAVELMAKTLRESAEPVTLVSTGPQTNVALLLASHPELHSKIARIVIMGGAMGL---------------------- 156 (311)
T ss_pred CCCccHHHHHHHHHHhCCCCeEEEEccchHHHHHHHHHCchhhhhhCEEEEccCCCCC----------------------
Confidence 456799999999997 69999999999999999999999999999999999999853
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHhhh
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWL 238 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~~ 238 (804)
||+ +|.||||||+|||||++||+|++|++|+|||+|+++.++.+++++|... +++.++|+.+++++|.++|.
T Consensus 157 -Gn~------~~~aEfN~~~DPeAA~~Vl~s~~~i~~vpldvt~~~~~t~~~~~~l~~~-~~~~~~~l~~~~~~~~~~~~ 228 (311)
T PRK10443 157 -GNW------TPAAEFNIYVDPEAAEIVFQSGIPIVMAGLDVTHKAQIMDEDIERIRAI-GNPVATIVAELLDFFMEYHK 228 (311)
T ss_pred -CCC------CcchhhccCcCHHHHHHHHhCCCCEEEecccccceeecCHHHHHHHHhc-CChHHHHHHHHHHHHHHHhH
Confidence 996 8999999999999999999999999999999999999999999999875 67899999999998887665
Q ss_pred c-ccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCc-cccccC
Q 003674 239 N-DQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNK-PYGISD 294 (804)
Q Consensus 239 ~-~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~-~~G~~~ 294 (804)
. .++..++++||++|++++++| ++++.++++|+||++|. +||++.
T Consensus 229 ~~~~~~~g~~lhD~lava~~~~P-----------~~~~~~~~~v~Ve~~g~~trG~tv 275 (311)
T PRK10443 229 DEKWGFVGAPLHDPCTIAWLLKP-----------ELFTTVERWVGVETQGEYTQGMTV 275 (311)
T ss_pred hhhCCCCCCCCCCHHHhHHhcCc-----------ceEEEEEeCEEEEcCCCCCCceEE
Confidence 4 345678999999999999999 99999999999999987 699874
No 23
>PRK10768 ribonucleoside hydrolase RihC; Provisional
Probab=100.00 E-value=4.4e-43 Score=380.65 Aligned_cols=211 Identities=26% Similarity=0.365 Sum_probs=186.9
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++| .|||||+|++.||+++... ...+||.+|||+..+|.+.. .
T Consensus 55 ~~g-~dIPV~~Ga~~pl~~~~~~---------------------------------~~~~hG~~Gl~~~~~p~~~~---~ 97 (304)
T PRK10768 55 FFN-SDVPVAQGAAKPLVRPLRD---------------------------------AASVHGESGMEGYDFPEHTR---K 97 (304)
T ss_pred HhC-CCCeEEeCCccccCCCCCC---------------------------------cccccCCCCCCCCCCCCCCC---C
Confidence 468 7999999999999764311 23589999999998887654 3
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.++++|+++|+++++ +|+||||++|||||||+|++++|++.++||+||||||++..
T Consensus 98 ~~~~~A~~~i~~~~~~~~~~itila~GPLTNlA~al~~~P~i~~~i~~iviMGG~~~~---------------------- 155 (304)
T PRK10768 98 PLSIPAVEAMRDALMNAPEPVTLVAIGPLTNIALLLSTYPEVKPYIKRIVLMGGSAGR---------------------- 155 (304)
T ss_pred CCCccHHHHHHHHHHhCCCCEEEEECCcHHHHHHHHHHChhhHhhcCEEEEecCCcCc----------------------
Confidence 456789999999997 79999999999999999999999999999999999999842
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHhhh
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWL 238 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~~ 238 (804)
||+ +|.||||||+|||||++||+|++|++|||||+|+++.+++++++++... ++.++|+.+++++|++.+.
T Consensus 156 -GN~------t~~aEfN~~~DPeAA~iVl~s~~~i~~vpldvt~~~~~t~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~ 226 (304)
T PRK10768 156 -GNV------TPNAEFNIAVDPEAAAIVFRSGIPIVMCGLDVTNQALLTPDYLATLPEL--NRTGKMLHALFSHYRSGSM 226 (304)
T ss_pred -CCC------CccchhccCCCHHHHHHHHhCCCCeEEeccccceeeecCHHHHHHHHhc--ChHHHHHHHHHHHHHhhcc
Confidence 997 8999999999999999999999999999999999999999999999764 5789999999888776543
Q ss_pred cccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCc-cccccC
Q 003674 239 NDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNK-PYGISD 294 (804)
Q Consensus 239 ~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~-~~G~~~ 294 (804)
..++++||++|++++++| ++++.++++++||++|. +||++.
T Consensus 227 ----~~g~~~hD~la~a~~~~P-----------~~~~~~~~~v~Ve~~g~~trG~tv 268 (304)
T PRK10768 227 ----QTGLRMHDVCAIAYLLRP-----------ELFTLKPCFVDVETQGEFTAGATV 268 (304)
T ss_pred ----cCCCCcCcHHHhhheeCc-----------ccEEEEEecEEEEeCCCCCCceEE
Confidence 357899999999999999 99999999999999998 799874
No 24
>cd02649 nuc_hydro_CeIAG nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR).
Probab=100.00 E-value=6.6e-43 Score=379.04 Aligned_cols=219 Identities=22% Similarity=0.283 Sum_probs=191.3
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||+|++.||++.... ..++||.+|||+..+|.+... .+
T Consensus 53 ~~g~~diPV~~Ga~~pl~~~~~~---------------------------------~~~~hG~~Glg~~~~p~~~~~-~~ 98 (306)
T cd02649 53 ACGRRDIPVYRGASKPLLGPGPT---------------------------------AAYFHGKDGFGDVGFPEPKDE-LE 98 (306)
T ss_pred HhCCCCCCEecCCCccCCCCCCC---------------------------------ccccCCCCCCCCCCCCCCccc-CC
Confidence 47999999999999999875311 235899999999888876521 13
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.++++|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++...
T Consensus 99 ~~~~~a~~~i~~~~~~~~~~vtiva~GPLTNlA~al~~~p~~~~~i~~iviMGG~~~~~--------------------- 157 (306)
T cd02649 99 LQKEHAVDAIIRLVREYPGEITLVALGPLTNLALAYRLDPSLPQKIKRLYIMGGNREGV--------------------- 157 (306)
T ss_pred cCCCCHHHHHHHHHHhCCCCeEEEecccHHHHHHHHHHChHHHHhcCeEEEeCCCccCC---------------------
Confidence 456789999999997 689999999999999999999999999999999999998764
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhC-CCCEEEEcCCccc-ccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHh
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHS-GIPITLIPLDATN-TILVTKNFYKMFEESQNTYEAQYCFKSLKMARDT 236 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~s-g~pitlvpldvT~-~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~ 236 (804)
||+ +|.||||||+|||||++||+| ++|++|||||+|+ ++.+++++++++... ++.++|+.++++++.+.
T Consensus 158 -GN~------~~~aEfN~~~DPeAA~~Vl~s~~~~i~lv~ldvt~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 228 (306)
T cd02649 158 -GNT------TPAAEFNFHVDPEAAHIVLNSFGCPITIVPWETTLLAFPLDWEFEDKWANR--LEKALFAESLNRREYAF 228 (306)
T ss_pred -CCC------CcccccccccCHHHHHHHHhcCCCCEEEEccccccceeecCHHHHHHHHhc--ChHHHHHHHHHHHHHHH
Confidence 997 899999999999999999999 9999999999999 999999999999864 47899999999988776
Q ss_pred hhcccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEE-EEEEEEecCc-cccccC
Q 003674 237 WLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEY-MNITVVTSNK-PYGISD 294 (804)
Q Consensus 237 ~~~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~-~~v~Vet~g~-~~G~~~ 294 (804)
+....+..++++||++|++++++| ++++.+. .+++||++|. .||++.
T Consensus 229 ~~~~~~~~g~~~hD~lava~~~~P-----------~l~~~~~~~~v~Ve~~g~~~~G~tv 277 (306)
T cd02649 229 ASEGLGGDGWVPCDALAVAAALDP-----------SIITRRLTYAVDVELHGELTRGQMV 277 (306)
T ss_pred HHhhcCCCCCCCCcHHHHHHHcCH-----------hHEEEEEeeeEEEEECCCCCcceEE
Confidence 554445678999999999999999 9999765 5599999987 699974
No 25
>cd02654 nuc_hydro_CjNH nuc_hydro_CjNH. Nucleoside hydrolases similar to Campylobacter jejuni nucleoside hydrolase. This group contains eukaryotic and bacterial proteins similar to C. jejuni nucleoside hydrolase. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. C. jejuni nucleoside hydrolase is inactive against natural nucleosides or against common nucleoside analogues.
Probab=100.00 E-value=5.1e-42 Score=374.30 Aligned_cols=221 Identities=20% Similarity=0.187 Sum_probs=184.3
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCC--
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRY-- 78 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~-- 78 (804)
++||.|||||+|++.||++.... .|| ..+.||.+|+++..+|++...+
T Consensus 56 ~~g~~dIPV~~Ga~~pl~~~~~~---~~~---------------------------~~~~~G~~g~~~~~~p~~~~~~~~ 105 (318)
T cd02654 56 LAGADAIPVYAGANTPLGRTNRA---FHA---------------------------WESLYGAYLWQGAWSPEYSDMYTN 105 (318)
T ss_pred HhCCCCCCEEECCCccccCCccc---ccc---------------------------ccccCCCcccCCCCCCCccccccc
Confidence 47999999999999999875421 111 2467899999988777654110
Q ss_pred ---CCCCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCC
Q 003674 79 ---SPLEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRP 153 (804)
Q Consensus 79 ---~~~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~ 153 (804)
.+.+.++|+++|+++++ +++||||++|||||||+|++++|++.++||+||||||++...
T Consensus 106 ~~~~~~~~~~A~~~i~~~~~~~p~~itiva~GPLTNlA~al~~~P~~~~~i~~iviMGG~~~~~---------------- 169 (318)
T cd02654 106 ASIIRNASIPAALFMIEMVRKHPHEVSIVAAGPLTNLALALRIDPDFAPLAKELVIMGGYLDDI---------------- 169 (318)
T ss_pred cccCCCCCccHHHHHHHHHHhCCCceEEEECCcHHHHHHHHHHChhHHHhCCEEEEeCCCccCC----------------
Confidence 13446789999999997 689999999999999999999999999999999999998643
Q ss_pred CCCCCCC-CccccCCC-CCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHH
Q 003674 154 QQCGDPG-NLFTDYTT-NPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLK 231 (804)
Q Consensus 154 ~q~~~~G-N~~~~~~~-~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~ 231 (804)
| |+ + ++.||||||+|||||++||+|++|++|+|||+|+++.+++++++++ ++.++++.++++
T Consensus 170 ------g~~~-----~~~~~aEfN~~~DPeAA~iVl~s~~~~~~v~ldvT~~~~~~~~~~~~~-----~~~~~~~~~~~~ 233 (318)
T cd02654 170 ------GEFV-----NRHYASDFNLIMDPEAASIVLTAPWKSITIPGNVTNRTCLTPEQIKAD-----DPLRDFIRETLD 233 (318)
T ss_pred ------CCcC-----CCCCCcceeeccCHHHHHHHHhCCCCEEEeCcccccceeCCHHHHhcc-----CHHHHHHHHHHH
Confidence 4 44 1 2399999999999999999999999999999999999999988754 356899999998
Q ss_pred HHHHhhhcccCC-CCCccccchhhhhhhccccccCCCCCCCcceeeEEE-EEEEEecCccccccC
Q 003674 232 MARDTWLNDQFY-ASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYM-NITVVTSNKPYGISD 294 (804)
Q Consensus 232 ~~~~~~~~~~~~-~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~-~v~Vet~g~~~G~~~ 294 (804)
++.+++....+. .++++||++|++++++| ++++.+.+ +|+||+.+.+||++.
T Consensus 234 ~~~~~~~~~~~~~~g~~~hD~lava~~~~P-----------~l~~~~~~~~v~Ve~~~~~~G~tv 287 (318)
T cd02654 234 LPIDYAKEFVGTGDGLPMWDELASAVALDP-----------ELATSSETFYIDVQTDSDGGGQLI 287 (318)
T ss_pred HHHHHHHHhcCCCCCCCCchHHHHHHHcCH-----------hHccceEeEEEEEEeCCCcCCeEE
Confidence 888766543332 68999999999999999 99997777 999999887899875
No 26
>PTZ00313 inosine-adenosine-guanosine-nucleoside hydrolase; Provisional
Probab=100.00 E-value=6.4e-41 Score=366.70 Aligned_cols=229 Identities=23% Similarity=0.268 Sum_probs=181.2
Q ss_pred CCCCC-CCeeecCCCCCCCCccc-cccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCC-
Q 003674 1 MMDRD-DISVGVGGEGGILEDGT-ILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRR- 77 (804)
Q Consensus 1 ~~gr~-dIPV~~Ga~~pl~~~~~-~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~- 77 (804)
++||. ||||+.|+.+|+.+... ...+.| ..||.+|||+..+|++...
T Consensus 56 ~~g~~~dvPv~~ga~~~~~~~~~~~~~~~~------------------------------g~~G~~glg~~~~p~~~~~~ 105 (326)
T PTZ00313 56 MMHAREATPLFPIGKSSFKGVNPFPSEWRW------------------------------SAKNMDDLPCLNIPEHVAIW 105 (326)
T ss_pred HhCCCCCCCeeeecCCcccCCCCCcchhee------------------------------cccCCCCCCCCCCCCccccc
Confidence 47996 89999999998755210 011111 1488899998878865421
Q ss_pred -CCCCC--cccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCC-CchhccCcEEEEcCCCCCCCCCCCCCCCCCCCC
Q 003674 78 -YSPLE--QLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNP-HLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSC 151 (804)
Q Consensus 78 -~~~~~--~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP-~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~ 151 (804)
..+.+ ..+|+++|+++++ +|+||||++|||||||+|++++| +++++||+||||||++...
T Consensus 106 ~~~~~~~~~~~a~~~i~~~i~~~p~eItiva~GPLTNlAlal~~~pp~~~~~ik~iviMGG~~~~~-------------- 171 (326)
T PTZ00313 106 EKLKPENEALVGEELLADLVMSSPEKVTICVTGPLSNVAWCIEKYGEEFTKKVEECVIMGGAVDVG-------------- 171 (326)
T ss_pred cccCCccccchHHHHHHHHHHhCCCCEEEEECCcHHHHHHHHHhCCHHHHHhcCEEEEeCCcccCC--------------
Confidence 00112 2359999999996 78999999999999999999996 9999999999999999764
Q ss_pred CCCCCCCCCCccccCCCCCccccccccCHHHHHHHHhCC-CCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHH
Q 003674 152 RPQQCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSG-IPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSL 230 (804)
Q Consensus 152 ~~~q~~~~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg-~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l 230 (804)
||++... .+|.||||||+|||||++||+|+ +|++|||||+|+++.++++++++|.+..+.+.++|+.++.
T Consensus 172 --------GN~~~~~-~tp~AEfN~~~DPeAA~iV~~s~~~~i~~v~LdvT~~~~~t~~~~~~l~~~~~~~~~~~~~~~~ 242 (326)
T PTZ00313 172 --------GNVFLPG-TDGSAEWNIYWDPPAAKTVLMCPHIRKVLFSLDSTNSVPVTSEVVKKFGAQNKYLLSQFVGSTW 242 (326)
T ss_pred --------CCccCCC-CCcccchhhhcCHHHHHHHHhCCCCCEEEeccccccceeCCHHHHHHHHhcCcchHHHHHHHHH
Confidence 8863222 37999999999999999999996 9999999999999999999999998753335788888765
Q ss_pred HHHHHhhhcccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCc-cccccC
Q 003674 231 KMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNK-PYGISD 294 (804)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~-~~G~~~ 294 (804)
..+..+.. .....++++||++|++++++| ++++.++++|+||++|. +||++.
T Consensus 243 ~~~~~~~~-~~~~~g~~~hD~lA~a~~~~P-----------el~~~~~~~v~Ve~~~~~t~G~tv 295 (326)
T PTZ00313 243 AMCTHHEL-LRPGDGYYAWDVLTAAYVIER-----------NLAELEPVPLEVVVEKAKNEGRTR 295 (326)
T ss_pred hhhhhhhh-hcCCCCCcCcHHHHHHHhcCh-----------heEEEEEEEEEEEeCCCCCCceEE
Confidence 54321111 012368999999999999999 99999999999999875 699873
No 27
>cd00455 nuc_hydro nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium, the purine-specific inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax and, pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases such as URH1 from Saccharomyces cerevisiae, RihA and RihB from Escherichia coli. Nucleoside hydrolases are of interest as a target for antiprotozoan drugs as, no nucleoside hydrolase activity or genes encoding these enzymes have been detected in humans and, parasitic protozoans lack de novo purine synthesis relying on nucleosid
Probab=100.00 E-value=3.8e-40 Score=356.42 Aligned_cols=216 Identities=23% Similarity=0.288 Sum_probs=183.7
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||+|++.||.+....+ ....||.+|.+. .+... .+
T Consensus 51 ~~g~~~iPV~~G~~~pl~~~~~~~--------------------------------~~~~~g~~g~~~--~~~~~---~~ 93 (295)
T cd00455 51 LLGRLDIPVYAGATRPLTGEIPAA--------------------------------YPEIHGEGGLGL--PIPPI---IE 93 (295)
T ss_pred HhCCCCCCEeCCCCCCCCCCCCCC--------------------------------CcccCCCCCCCC--CCCCC---Cc
Confidence 479999999999999997653211 113456666332 12221 13
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.++++|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++...
T Consensus 94 ~~~~~a~~~i~~~~~~~~~~v~ila~GplTNlA~al~~~p~~~~~i~~iviMGG~~~~~--------------------- 152 (295)
T cd00455 94 ADDPEAVQLLIDLIRKYPDEITIVALGPLTNLAMAFILDPDIKDRVKEIVIMGGAFLVP--------------------- 152 (295)
T ss_pred CCCcCHHHHHHHHHHhcCCCeEEEECCchHHHHHHHHHChHHHHhCCEEEEcCCccCCC---------------------
Confidence 456799999999997 678999999999999999999999999999999999998543
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHhhh
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWL 238 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~~ 238 (804)
||+ +|.||||||+||+||++||+++++++|+|||+|+++.+++++++++.+. +++.++|+.++++++.+.+.
T Consensus 153 -Gn~------~~~aEfN~~~DP~AA~~Vl~s~~~i~~vpldvt~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 224 (295)
T cd00455 153 -GNV------TPVAEANFYGDPEAANIVFNSAKNLTIVPLDVTNQAVLTPPMVERIFEQ-GTSIGLLIKPMIDYYYKAYQ 224 (295)
T ss_pred -CCC------CccchhhcccCHHHHHHHHhCCCCeEEecccceeeEeCCHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHh
Confidence 997 8999999999999999999999999999999999999999999999875 56899999999998887655
Q ss_pred cccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEecCccccccC
Q 003674 239 NDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNKPYGISD 294 (804)
Q Consensus 239 ~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet~g~~~G~~~ 294 (804)
. ++..++++||++|++++++| ++++.+..+++|+++|.++|++.
T Consensus 225 ~-~~~~~~~~~D~lAv~~~~~P-----------~~~~~~~~~v~V~~~g~~~G~t~ 268 (295)
T cd00455 225 K-PGIEGSPIHDPLAVAYLLNP-----------SMFDYSKVPVDVDTDGLTRGQTI 268 (295)
T ss_pred c-CCCCcCCCChHHHHHHhcCc-----------ccEEEEEEeEEEEeCCCCCceEE
Confidence 4 45678999999999999999 99999999999999996699875
No 28
>cd02647 nuc_hydro_TvIAG nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. Nucleoside hydrolases vary in their substrate specificity. This group contains eukaryotic and bacterial proteins similar to the purine specific inosine-adenosine-guanosine-preferring nucleoside hydrolase (IAG-NH) from T. vivax. T. vivax IAG-NH is of the order of a thousand to ten thousand fold more specific towards the naturally occurring purine nucleosides, than towards the pyrimidine nucleosides.
Probab=100.00 E-value=2.7e-40 Score=359.23 Aligned_cols=176 Identities=38% Similarity=0.569 Sum_probs=155.9
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.++.+|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++...
T Consensus 103 ~~~~~a~~~i~~~~~~~~~~vtiva~GPLTNlA~al~~~P~~~~~i~~iviMGG~~~~~--------------------- 161 (312)
T cd02647 103 LAEETAQLVLIEKIKASLEPVTLLVTGPLTNLARALDSDPDISSNIEEVYIMGGGVDAP--------------------- 161 (312)
T ss_pred cCcchHHHHHHHHHHhCCCCEEEEEcccHHHHHHHHHHChHHHhhcCEEEEeCCccCCC---------------------
Confidence 346789999999996 689999999999999999999999999999999999999764
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHH----HHHHHHhcCChhHHHHHHHHHHHH
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNF----YKMFEESQNTYEAQYCFKSLKMAR 234 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~----~~~l~~~~~t~~a~~~~~~l~~~~ 234 (804)
||+++. ..+|.||||||+|||||++||+|++|++|||||+|+++.+++++ ++++.+. +++.++|+.+++++|+
T Consensus 162 -GN~~~~-~~tp~aEfNi~~DPeAA~iV~~s~~~i~~vpldvt~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 238 (312)
T cd02647 162 -GNVFTP-PSNGTAEFNIFWDPLAAKTVFDSGLKITLVPLDATNTVPLTREFLETDRQRFAAQ-RLPASDLAGQGYALVK 238 (312)
T ss_pred -CccccC-CCCCCcccccccCHHHHHHHHhCCCCEEEEccccccccccCHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHh
Confidence 886533 34899999999999999999999999999999999999999995 4555554 4688999999998887
Q ss_pred HhhhcccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEEEE-EEEEecCccccccCC
Q 003674 235 DTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMN-ITVVTSNKPYGISDG 295 (804)
Q Consensus 235 ~~~~~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~-v~Vet~g~~~G~~~g 295 (804)
+.+ +..++++||++|++++++| ++++.++++ ++||++|.+||++.-
T Consensus 239 ~~~----~~~g~~~hD~lava~~~~p-----------~~~~~~~~~~v~Ve~~g~t~G~Tv~ 285 (312)
T cd02647 239 PLE----FNSTYYMWDVLTTLVLGAK-----------EVDNTKESLILEVDTDGLSAGQTVT 285 (312)
T ss_pred hhc----CCCCccccHHHHHHHHcCc-----------hhcccccccceEEEECCCCCceEEE
Confidence 654 4568999999999999999 999988899 999999988999753
No 29
>PF01156 IU_nuc_hydro: Inosine-uridine preferring nucleoside hydrolase; InterPro: IPR001910 Inosine-uridine preferring nucleoside hydrolase (3.2.2.1 from EC) (IU-nucleoside hydrolase or IUNH) is an enzyme first identified in protozoan [] that catalyses the hydrolysis of all of the commonly occuring purine and pyrimidine nucleosides into ribose and the associated base, but has a preference for inosine and uridine as substrates. This enzyme is important for these parasitic organisms, which are deficient in de novo synthesis of purines, to salvage the host purine nucleosides. IUNH from Crithidia fasciculata has been sequenced and characterised, it is an homotetrameric enzyme of subunits of 34 Kd. An histidine has been shown to be important for the catalytic mechanism, it acts as a proton donor to activate the hypoxanthine leaving group. A highly conserved region located in the N-terminal extremity contains four conserved aspartates that have been shown [] to be located in the active site cavity. IUNH is evolutionary related to a number of uncharacterised proteins from various biological sources. This entry represents the structural domain of IUNH.; PDB: 1EZR_D 2MAS_B 1MAS_A 3MKM_C 3MKN_C 2C40_A 3T8J_A 2FF2_B 1KIE_A 2FF1_A ....
Probab=100.00 E-value=2.1e-40 Score=360.81 Aligned_cols=218 Identities=28% Similarity=0.443 Sum_probs=176.2
Q ss_pred CCC-CCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMD-RDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYS 79 (804)
Q Consensus 1 ~~g-r~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~ 79 (804)
++| |.|||||.|+..||..+... ...+||.+|||+..+|.+... .
T Consensus 54 ~~g~~~~iPV~~G~~~pl~~~~~~---------------------------------~~~~~g~~gl~~~~~~~~~~~-~ 99 (312)
T PF01156_consen 54 LAGGRDDIPVYKGADRPLVRPPEY---------------------------------APEIHGEDGLGDASLPEPEDE-P 99 (312)
T ss_dssp HTTTCSTS-EEEEESS-SSSSHHH---------------------------------HHHHHTTTSSTSS-HHSSSCH-C
T ss_pred HhcCCCccceeecchhhhhccccc---------------------------------hhhcccccCCCcccCcccccc-c
Confidence 365 88899999999999864321 235778899998766664332 1
Q ss_pred CCCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 80 PLEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCG 157 (804)
Q Consensus 80 ~~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~ 157 (804)
..++++|+++|+++++ +++|||||+|||||||+|++++|++++||++||||||++...
T Consensus 100 ~~~~~~a~~~i~~~~~~~~~~vtiva~GplTNlA~al~~~P~~~~~i~~iviMGG~~~~~-------------------- 159 (312)
T PF01156_consen 100 YPSDEDAVDFIIELLKAYPGEVTIVAIGPLTNLALALRRDPEIAKKIKRIVIMGGAFDGP-------------------- 159 (312)
T ss_dssp HBHSSBHHHHHHHHHHHSSSTEEEEECS-SHHHHHHHHHHGGHHGGEEEEEEE---SSS---------------------
T ss_pred ccccccHHHHHHHHHHhcCCcEEEEecCcchhHHHHHHhChHHHhhceEEEEECCccccC--------------------
Confidence 2467899999999997 689999999999999999999999999999999999999864
Q ss_pred CCCCccccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCCcccccccCHHHHHHHHHhcCChhHHHHHHHHHHHHHhh
Q 003674 158 DPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTW 237 (804)
Q Consensus 158 ~~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpldvT~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~ 237 (804)
||+ +|.+||||++||+||++||++++|++++|||+|+++.+++++++++.+..+++.++|+.++++.+.+++
T Consensus 160 --Gn~------~~~aE~N~~~DP~AA~~Vl~s~~~i~~vpldvt~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (312)
T PF01156_consen 160 --GNV------TPVAEFNFYCDPEAAQIVLESGIPITLVPLDVTHQVLLTPEFLDRLRAQSGSPLARFLRDLLRFYFDFY 231 (312)
T ss_dssp ---SS------SSSC-HHHHHSHHHHHHHHCSSS-EEEE-HHHHTTSEEEHHHHHHHHHTCTCHHHHHHHHHHHHHHHHH
T ss_pred --CCC------CccCCcCcccCHHHHHHHhhcCCCeEEEecCccccccCCHHHHHHHHhcCcchHHHHHHHHHHHHHhhh
Confidence 996 999999999999999999999999999999999999999999999998446799999999999888766
Q ss_pred hcccCCCCCccccchhhhhh-hccccccCCCCCCCccee-eEEEEEEEEecCc-ccccc
Q 003674 238 LNDQFYASYFMWDSFTSGVA-MSIMQHSHNHNGENEFAE-MEYMNITVVTSNK-PYGIS 293 (804)
Q Consensus 238 ~~~~~~~~~~~~D~lA~a~a-~~p~~~~~~~~~~~~~~~-~~~~~v~Vet~g~-~~G~~ 293 (804)
... ..++++||++|++++ ++| +++. .++++++|+++|. +||++
T Consensus 232 ~~~--~~~~~~~D~la~~~~~~~P-----------~~~~~~~~~~v~V~~~~~~~~G~t 277 (312)
T PF01156_consen 232 RDG--SDGFPLHDPLAAAYAELDP-----------ELFTEFERGPVDVETDGGLTRGQT 277 (312)
T ss_dssp HHH--SSSEE-HHHHHHHHH-H-G-----------GGEEEEEEEEEEEESSSSTTTTEE
T ss_pred hhc--cCCcccCCHHHHHHHHhCC-----------ccceecceEEEEEEECCCCCCceE
Confidence 522 578999999999999 999 9966 9999999999974 58886
No 30
>KOG2938 consensus Predicted inosine-uridine preferring nucleoside hydrolase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=352.79 Aligned_cols=304 Identities=24% Similarity=0.252 Sum_probs=221.6
Q ss_pred CCCcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCC
Q 003674 414 LGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPI 492 (804)
Q Consensus 414 ~~~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~ 492 (804)
...++|||||+|.||++||+++|.+| +++++||| |.||...+.++ .||+++|+.+||.+||||.|+..||....
T Consensus 20 ~~~~iiid~D~~~Dd~~al~la~~~~--~~~ilglTtv~Gn~~~~~t~-~NA~~~L~l~~r~dIPV~~Ga~kpl~~~~-- 94 (350)
T KOG2938|consen 20 YKRKIIIDCDPGSDDAFALLLALLGP--ELEILGLTTVHGNVTVEDTD-RNALDLLSLLGRLDIPVYEGAAKPLIRSP-- 94 (350)
T ss_pred cceeEEEeCCCCcccHHHHHHHhcCc--cceeEeeeEeeCCccHhhhh-hhHHHHHHhcCCcCCCchhcccccccCCc--
Confidence 46789999999999999999999998 99999998 89998887764 67999999999999999999999996542
Q ss_pred CCCCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhcCCCCc
Q 003674 493 DPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTLEPGSK 572 (804)
Q Consensus 493 ~p~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~~~~~~ 572 (804)
..++ ...||.||++|. .+|.+...+.+ +..+..+++..+ ..+++
T Consensus 95 ------~~~a-~~~hG~dGl~d~--------~~~~~~~~~~~------------------~~~~~~~i~~~~---~~p~~ 138 (350)
T KOG2938|consen 95 ------NDWA-NAFHGIDGLGDI--------LLPPPRDDINV------------------GHGAEFAIEQDI---AYPGE 138 (350)
T ss_pred ------cchh-hhhccccccCCc--------ccCCccccccc------------------cccHHHHHHHhh---cCCCC
Confidence 1233 446999999884 34442211111 223333333332 45779
Q ss_pred EEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCC-CcEEEe
Q 003674 573 ITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESP-LNITLI 651 (804)
Q Consensus 573 vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~-~~itlv 651 (804)
|||+++|||||||++++++|++.+++|+++||||+++. .||+. ..||||++.|||||++||++. .+++++
T Consensus 139 It~va~GPLTNlAla~~~~pd~~~~v~~ivimGG~~~~----~gnv~-----~~AefN~~~DPeAA~~vl~~~k~~~~v~ 209 (350)
T KOG2938|consen 139 ITIVAYGPLTNLALALALDPDFLKNVKRIVIMGGNYYG----NGNVT-----HGAEFNFYRDPEAAHTVLTRTKDPITVG 209 (350)
T ss_pred ceEEEeccchHHHHHhhcChhHhhccccEEEecccccc----ccCcC-----ccccccccCChHHHHHHHhcCCCceeEe
Confidence 99999999999999999999999999999999999985 48885 789999999999999999997 689999
Q ss_pred cccccccccCCHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHhcccccccccc-ccceee-EEEEeccccccccce-E
Q 003674 652 PLGVQRKVSSFPKILRRLCLK--NKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIF-LGEILG-AVALAGDNSLLKPTV-Q 726 (804)
Q Consensus 652 pldvt~~~~~t~~~l~~L~~~--~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~-l~D~la-Av~la~~~~~l~p~~-~ 726 (804)
|+++|++...+....-++... ..++...|+......++.. .+.+. .... .+|..+ |+++ .+++.. .
T Consensus 210 pi~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~G-~~~~~~~d~~~~a~~i-----~~d~~~~~ 280 (350)
T KOG2938|consen 210 PINITHQGSLTNLALIRLSNRKNKHPILESYLSLGTARQQVY---NGAYG-NIFTPYPDNIYVAFAI-----FPDPLAAK 280 (350)
T ss_pred eeeeeeccccchhhhhhhhhhccCCchhHHhhhhhHHhhhcc---cccCC-ccCCCCCcHHHHHHHh-----hhhhhhhh
Confidence 999999998887666555432 2245555555443333221 11121 1112 344432 2222 122211 1
Q ss_pred EEEEEEEEccCccccceEEEecCC-----CcceEEEEecCHHHHHHHHHHHHhcc
Q 003674 727 VKSIKVIAEGNEYKDGQTVIDKNQ-----GIFVRVIENLDPEAYYDLFANELNSK 776 (804)
Q Consensus 727 ~~~v~V~~~~~~~~~G~tvvd~~~-----~~~v~v~~~vD~~~f~~~l~~~L~~~ 776 (804)
+.++.|......+++|++++++.. ..+++..+.+|...|+..+...|..+
T Consensus 281 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~f~~~~~~~l~~~ 335 (350)
T KOG2938|consen 281 TVYVSVDVLLDSPTRGQMVVDHLPAKLDYPANVTKITTVDVVKFLTLRIQVLGRK 335 (350)
T ss_pred hhhheeeeeecCcceeeeEEecchhhhcccccceeecccccchheehhhhhhhhh
Confidence 123333333345789999998432 57899999999999999999999775
No 31
>cd02648 nuc_hydro_1 NH_1: A subgroup of nucleoside hydrolases. This group contains fungal proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=100.00 E-value=1.6e-38 Score=346.88 Aligned_cols=227 Identities=19% Similarity=0.223 Sum_probs=173.5
Q ss_pred CCe-eecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCC--CCC----C---
Q 003674 6 DIS-VGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFL--PQG----S--- 75 (804)
Q Consensus 6 dIP-V~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~l--p~~----~--- 75 (804)
||| |+.|++.||++.... ...+||.||||+..+ |.. .
T Consensus 78 ~iP~V~~Ga~~PL~~~~~~---------------------------------a~~~HG~dGlgg~~~~~p~~~p~~~~~~ 124 (367)
T cd02648 78 EKPIVASGSDQPLEGERLT---------------------------------ASYFHGRDGLSGVHWLHPDFTPVETWIP 124 (367)
T ss_pred CCCEEEcCCCcccCCCCcc---------------------------------cCccCCCCCCCCccccCCcccccccccc
Confidence 699 999999999875321 235788999998753 211 1
Q ss_pred ---CCCCCCCcccHHHHHHHHHc--C-CCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCC
Q 003674 76 ---RRYSPLEQLTAQQVLTDKIS--E-GPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSS 149 (804)
Q Consensus 76 ---~~~~~~~~~~A~~~Li~~i~--~-g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~ 149 (804)
+.. ..+.++|+++|+++++ + ++|+||++|||||||+|++++|++.++||+||||||++...
T Consensus 125 ~~~~~~-~~~~~~A~~~i~~~~~~~p~~~itivalGPLTNiA~al~~~P~~~~~Ik~IviMGG~~~~~------------ 191 (367)
T cd02648 125 EIVAPL-TPSDKPAYDVILDILREEPDHTVTIAALGPLTNLAAAARKDPETFAKVGEVVVMGGAIDVP------------ 191 (367)
T ss_pred cccccc-CcCCccHHHHHHHHHHhCCCCcEEEEEcccHHHHHHHHHHChHHHhhhcEEEEeCCcccCC------------
Confidence 011 2346789999999996 4 46999999999999999999999999999999999998754
Q ss_pred CCCCCCCCCCCCccccCCCCCccccccccCHHHHHHHHhC----------CCCEEEEcCCcccccccCHHHH-----HHH
Q 003674 150 SCRPQQCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHS----------GIPITLIPLDATNTILVTKNFY-----KMF 214 (804)
Q Consensus 150 ~~~~~q~~~~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~s----------g~pitlvpldvT~~~~it~~~~-----~~l 214 (804)
||+ +|.||||||+|||||++||++ ++|++|||||+|+++.++.+++ +.+
T Consensus 192 ----------GN~------tp~aEfNi~~DPeAA~iV~~~~~~~~~~s~~~~~i~mvpLDvT~~~~l~~~~~~~~~~~~l 255 (367)
T cd02648 192 ----------GNT------SPVAEFNCFADPYAAAVVIDEPPSTAPEARRKLPLQVFPLDITTGHTLPYSSLFATYVTPR 255 (367)
T ss_pred ----------CCC------CccchhhcccCHHHHHHHHhccccccccccCCCCeEEEeecCCCCeeeCHHHhhhhHHHHH
Confidence 996 999999999999999999984 5699999999999999999875 333
Q ss_pred HH-hcCChhHHHHHHHHH-----HHHHhhhcccCCCC---CccccchhhhhhhccccccCCCCCCCcceeeEEEEEEEEe
Q 003674 215 EE-SQNTYEAQYCFKSLK-----MARDTWLNDQFYAS---YFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVT 285 (804)
Q Consensus 215 ~~-~~~t~~a~~~~~~l~-----~~~~~~~~~~~~~~---~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~~~v~Vet 285 (804)
.. +.+++.++|+.+++. +|++++.+..+..+ +.+||++|++++++| .-+.+..-+..+++.+.++++||+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~lHD~lava~~i~p-~~~~~~~~~~~~~~~~~~~v~Ve~ 334 (367)
T cd02648 256 DAPERGSPLARWLEHVFISTFLTHPRAFTPEEFLPDRSELFEMHDPLAVWYAIFA-DMPATGSIDGNGWKHTPRDFRVET 334 (367)
T ss_pred HhhccCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCCCCCcHHHhHhhcCc-ccccccccccceEEEEEecEEEEe
Confidence 43 124788997555544 66665544332333 489999999999998 000000011128899999999999
Q ss_pred cCc-cccccCC
Q 003674 286 SNK-PYGISDG 295 (804)
Q Consensus 286 ~g~-~~G~~~g 295 (804)
+|+ +||++.-
T Consensus 335 ~g~~trG~tV~ 345 (367)
T cd02648 335 SGQWTRGMCVV 345 (367)
T ss_pred CCCCCCceEEE
Confidence 997 6999753
No 32
>cd02652 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=100.00 E-value=1.5e-32 Score=294.82 Aligned_cols=188 Identities=22% Similarity=0.274 Sum_probs=138.3
Q ss_pred EEEecCCC--chHHHHHHHHHhCCCCceeEEEEE-EeCCCCchHHHHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCCC
Q 003674 418 VVFDMDMS--VGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPIDP 494 (804)
Q Consensus 418 VIiDtD~G--~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~p 494 (804)
||||||+| +||++||+||+.+| +++|+||| |.||.+.. .++..++.++||.+|||+.| +|+.....
T Consensus 1 vIlDTD~G~DiDDa~Al~lal~~p--~~~llgIT~~~GN~~~~----~~~~~~n~~~gr~dIPVg~~--~~~~~~~~--- 69 (293)
T cd02652 1 LILDTDIGGDPDDALALALAHALQ--KCDLLAVTITLADASAR----RAIDAVNRFYGRGDIPIGAD--YHGWPEDA--- 69 (293)
T ss_pred CEEeCCCCCChHHHHHHHHHhhCC--CCceEEEEecCCcccHh----HHHHHHHHhcCCCCCcEeeC--CCCCCCcc---
Confidence 69999999 79999999999999 89999999 67998755 23556778899999999765 45532210
Q ss_pred CCCCcccccccccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc-C-CCCc
Q 003674 495 SVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL-E-PGSK 572 (804)
Q Consensus 495 ~~~~~~~~~~~~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~-~-~~~~ 572 (804)
. .|+..+.++. .++..... + ...+.|.+ +|++.+ + ++++
T Consensus 70 ----~------~~~~~~~~~~--------~~~~~~~~-----------~-------~~~~~A~~---~i~~~l~~~~~~~ 110 (293)
T cd02652 70 ----K------DHAKFLLEGD--------RLHHDLES-----------A-------EDALDAVK---ALRRLLASAEDAS 110 (293)
T ss_pred ----c------cccceeCCCC--------CCCCcccc-----------c-------ccCccHHH---HHHHHHHhcCCCC
Confidence 0 1222222111 11211000 0 01123444 444444 3 4789
Q ss_pred EEEEEccChhhHHHHHhh------Ccch-hhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhC-
Q 003674 573 ITLLTNGPLTNLAKILSS------KKNA-TSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFES- 644 (804)
Q Consensus 573 vtIla~GPLTNLA~al~~------~Pei-~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s- 644 (804)
||||++|||||||.++++ +|++ .++||+||+|||++.. ..||++ .+|||+++||+||++||++
T Consensus 111 vtivaiGplTNlA~ll~~~~d~l~~pel~~~kvk~lviMGG~~~~---~~Gn~~------~aE~N~~~Dp~AA~~V~~~~ 181 (293)
T cd02652 111 VTIVSIGPLTNLAALLDADADPLTGPELVRQKVKRLVVMGGAFYD---PDGNVQ------HREYNFVTDPKAAQRVAGRA 181 (293)
T ss_pred EEEEEcccHHHHHHHHHhccccccCcHHHHhhCCEEEEeCCCccC---CCCCcc------hhhhhcccCHHHHHHHHhcc
Confidence 999999999999999999 9999 5899999999999842 158874 6899999999999999999
Q ss_pred ---CCcEEE--ecccccccccCCHH
Q 003674 645 ---PLNITL--IPLGVQRKVSSFPK 664 (804)
Q Consensus 645 ---~~~itl--vpldvt~~~~~t~~ 664 (804)
++|+++ +++|+++++.....
T Consensus 182 ~~~g~p~~~V~~~~ev~~~~~~~~~ 206 (293)
T cd02652 182 QHLGIPVRIVWSGYELGEAVSYPHV 206 (293)
T ss_pred cccCCCEEEEecCHHHhccccCchh
Confidence 899999 69999998866654
No 33
>KOG2938 consensus Predicted inosine-uridine preferring nucleoside hydrolase [Nucleotide transport and metabolism]
Probab=99.96 E-value=2e-29 Score=273.84 Aligned_cols=218 Identities=21% Similarity=0.217 Sum_probs=173.1
Q ss_pred CCCCCCCeeecCCCCCCCCccccccccCCcccccccCcccccccccccccccCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~g~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||.|+..||..+... -..++||.||+++..+|.+...
T Consensus 74 l~~r~dIPV~~Ga~kpl~~~~~~--------------------------------~a~~~hG~dGl~d~~~~~~~~~--- 118 (350)
T KOG2938|consen 74 LLGRLDIPVYEGAAKPLIRSPND--------------------------------WANAFHGIDGLGDILLPPPRDD--- 118 (350)
T ss_pred hcCCcCCCchhcccccccCCccc--------------------------------hhhhhccccccCCcccCCcccc---
Confidence 47999999999999999886531 1346888999999888875543
Q ss_pred CCcccHHHHHHHHHc--CCCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~Li~~i~--~g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~ 158 (804)
.+.++++.++++... +++||+|++|||||||++++++|++.+++|+|+||||++.+.
T Consensus 119 ~~~~~~~~~~i~~~~~~p~~It~va~GPLTNlAla~~~~pd~~~~v~~ivimGG~~~~~--------------------- 177 (350)
T KOG2938|consen 119 INVGHGAEFAIEQDIAYPGEITIVAYGPLTNLALALALDPDFLKNVKRIVIMGGNYYGN--------------------- 177 (350)
T ss_pred ccccccHHHHHHHhhcCCCCceEEEeccchHHHHHhhcChhHhhccccEEEeccccccc---------------------
Confidence 456788888888775 799999999999999999999999999999999999999864
Q ss_pred CCCccccCCCCCccccccccCHHHHHHHHhCC-CCEEEEcCCcccccccCHHHHHHHHHh--cCChhHHHHHHHHHHHHH
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSG-IPITLIPLDATNTILVTKNFYKMFEES--QNTYEAQYCFKSLKMARD 235 (804)
Q Consensus 159 ~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~sg-~pitlvpldvT~~~~it~~~~~~l~~~--~~t~~a~~~~~~l~~~~~ 235 (804)
||+ ++.|||||+.|||||++||+++ ++++++||++|.+..+|....-++... .++++..|+.-....++.
T Consensus 178 -gnv------~~~AefN~~~DPeAA~~vl~~~k~~~~v~pi~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (350)
T KOG2938|consen 178 -GNV------THGAEFNFYRDPEAAHTVLTRTKDPITVGPINITHQGSLTNLALIRLSNRKNKHPILESYLSLGTARQQV 250 (350)
T ss_pred -cCc------CccccccccCChHHHHHHHhcCCCceeEeeeeeeeccccchhhhhhhhhhccCCchhHHhhhhhHHhhhc
Confidence 887 9999999999999999999997 688999999999999998776665543 345555555543333221
Q ss_pred hhhcccCCCCCccccchhhhhhhccccccCCCCCCCccee--eEEEEEEEEecCcccccc
Q 003674 236 TWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAE--MEYMNITVVTSNKPYGIS 293 (804)
Q Consensus 236 ~~~~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~--~~~~~v~Vet~g~~~G~~ 293 (804)
+.+..+..++..||..++++++.| +.+. +.++.+.+.+....+|+.
T Consensus 251 -~~~~~G~~~~~~~d~~~~a~~i~~-----------d~~~~~~~~~~~~~~~~~~~~~~~ 298 (350)
T KOG2938|consen 251 -YNGAYGNIFTPYPDNIYVAFAIFP-----------DPLAAKTVYVSVDVLLDSPTRGQM 298 (350)
T ss_pred -ccccCCccCCCCCcHHHHHHHhhh-----------hhhhhhhhhheeeeeecCcceeee
Confidence 111134455668999999999988 6555 457888888888888774
No 34
>cd02652 nuc_hydro_2 NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.
Probab=99.93 E-value=5.3e-26 Score=244.42 Aligned_cols=155 Identities=23% Similarity=0.375 Sum_probs=117.2
Q ss_pred CcccHHHHHHHHHc---CCCeEEEEccchhHHHHHHhh------CCCc-hhccCcEEEEcCCCCCCCCCCCCCCCCCCCC
Q 003674 82 EQLTAQQVLTDKIS---EGPITVILIGAHTNMGIFLMK------NPHL-KKNIEHIYAMGGGVRSKNPTGCCPKNSSSSC 151 (804)
Q Consensus 82 ~~~~A~~~Li~~i~---~g~itIvaiGPLTNlA~al~~------dP~l-~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~ 151 (804)
+.++|+++|+++++ +++||||++|||||||++|++ +|++ ++|||+||||||++...
T Consensus 91 ~~~~A~~~i~~~l~~~~~~~vtivaiGplTNlA~ll~~~~d~l~~pel~~~kvk~lviMGG~~~~~-------------- 156 (293)
T cd02652 91 DALDAVKALRRLLASAEDASVTIVSIGPLTNLAALLDADADPLTGPELVRQKVKRLVVMGGAFYDP-------------- 156 (293)
T ss_pred cCccHHHHHHHHHHhcCCCCEEEEEcccHHHHHHHHHhccccccCcHHHHhhCCEEEEeCCCccCC--------------
Confidence 34689999999995 578999999999999999999 9999 58999999999998421
Q ss_pred CCCCCCCCCCccccCCCCCccccccccCHHHHHHHHhC----CCCEEE--EcCCcccccccCHHHHHHHHHhcCChhHHH
Q 003674 152 RPQQCGDPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHS----GIPITL--IPLDATNTILVTKNFYKMFEESQNTYEAQY 225 (804)
Q Consensus 152 ~~~q~~~~GN~~~~~~~~p~AEfN~~~DPeAA~iVl~s----g~pitl--vpldvT~~~~it~~~~~~l~~~~~t~~a~~ 225 (804)
.||+ + .+||||++||+||++||++ ++|++| +++|+|+++......... ...++|.
T Consensus 157 -------~Gn~------~-~aE~N~~~Dp~AA~~V~~~~~~~g~p~~~V~~~~ev~~~~~~~~~~~~~--~~~~~p~--- 217 (293)
T cd02652 157 -------DGNV------Q-HREYNFVTDPKAAQRVAGRAQHLGIPVRIVWSGYELGEAVSYPHVLVIA--HPFNTPV--- 217 (293)
T ss_pred -------CCCc------c-hhhhhcccCHHHHHHHHhcccccCCCEEEEecCHHHhccccCchhhhhc--ccccchH---
Confidence 1886 4 8999999999999999999 899988 699999998777752211 1111221
Q ss_pred HHHHHHHHHHhhhcccCCCCCccccchhhhhhhccccccCCCCCCCcceeeEE-----EEEEEEecCc
Q 003674 226 CFKSLKMARDTWLNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEY-----MNITVVTSNK 288 (804)
Q Consensus 226 ~~~~l~~~~~~~~~~~~~~~~~~~D~lA~a~a~~p~~~~~~~~~~~~~~~~~~-----~~v~Vet~g~ 288 (804)
++ .| |. + ....++||++|++++++| ...+|+... ..|+|..+|.
T Consensus 218 -~~---~y---~~--~-~~~~~~wD~~t~l~av~~---------~~~~F~~~~~~~g~g~v~~~~~G~ 266 (293)
T cd02652 218 -FA---AY---WP--R-SHRRPLWDPLTLLAAVRG---------GGMLFDLREVQLGPGRVEVDSSGV 266 (293)
T ss_pred -HH---HH---Hh--c-cCCccchHHHHHHHeeCC---------cCCccccccccCCCceEEEcCCCC
Confidence 11 11 11 1 123799999999999998 234777443 5666665554
No 35
>PF07632 DUF1593: Protein of unknown function (DUF1593); InterPro: IPR011483 This is a family of proteins found in Rhodopirellula baltica that are predicted to be secreted. Also, a member has been identified in Caulobacter crescentus (Caulobacter vibrioides) (Q9AAT9 from SWISSPROT). These proteins may be related to IPR001910 from INTERPRO.; PDB: 2YHG_A.
Probab=95.28 E-value=0.039 Score=58.99 Aligned_cols=144 Identities=21% Similarity=0.294 Sum_probs=72.2
Q ss_pred cEEEecCCC--chHHHHHHHHHhCCCCceeEEEEEEeCCCCchHH-HHHHHHHHHHHcCCCCCeEeecCCcccCCCCCCC
Q 003674 417 PVVFDMDMS--VGDFLALFYLLKAPVEVINLKAILVSPTGWANAA-TIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPID 493 (804)
Q Consensus 417 kVIiDtD~G--~DDalAL~~aL~~p~~~i~LlgItv~Gn~~~~~a-~~~~~~~vL~~~Gr~dIPV~~Ga~~pl~~~~~~~ 493 (804)
+|||=||+| +||...|+-+|.-. .++|+.||+.+-..|.... ..+.+.++++..+. ..| -|+.+.+-+
T Consensus 1 RviV~TDi~~EpDD~~SlvR~LlYs-Ne~dieGivattS~~~~~~~~~~~i~~iIdaY~k-v~p-------NL~~H~~~y 71 (260)
T PF07632_consen 1 RVIVLTDIGNEPDDAQSLVRLLLYS-NEFDIEGIVATTSTWHWSGVHPEWIHRIIDAYEK-VYP-------NLNKHAPGY 71 (260)
T ss_dssp EEEEEE-TTS-THHHHHHHHHHHTG-GGSEEEEEEE--BTTB------HHHHHHHHHHHH-HHH-------HHTTTSTT-
T ss_pred CEEEeCCCCCCCchHHHHHHHHHhc-cccceeEEEEecccccCCCCCHHHHHHHHHHHHH-HHH-------HHHhcCCCC
Confidence 589999995 99999998766643 2899999983322332211 22345566666553 111 011111111
Q ss_pred CCCCCccccccc-ccCCCCCCCcccccCcccCCCCCCcccCcccccccCCCCCCCCCCCCchhHHHHHHHHHhhc--CCC
Q 003674 494 PSVGDCKYVKSI-PHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIWDSTTSTL--EPG 570 (804)
Q Consensus 494 p~~~~~~~~~~~-~hG~dGlgd~~~l~g~~~~lP~~~~~~~~e~av~~g~p~~td~p~~~~p~A~~~~~~i~~~~--~~~ 570 (804)
|. .++..++ ..|.-. ||+ .++-.|. ..+.+ ++|++.+ ..+
T Consensus 72 Ps---~e~L~s~vk~G~~~-------yg~--------------~~~G~~~---------~s~GS----~lIi~~~~~~d~ 114 (260)
T PF07632_consen 72 PS---PEYLRSIVKQGNPV-------YGM--------------PAVGEGK---------DSEGS----ELIIEALDKDDP 114 (260)
T ss_dssp -----HHHHHHTEEE--SS--------GG--------------GG-STT------------HHH----HHHHHHHHSS-S
T ss_pred CC---HHHHHHHHccCCcc-------cCc--------------ccCCCCC---------CChHH----HHHHHHHcCCCC
Confidence 20 1111111 122111 111 0110000 12233 3444443 346
Q ss_pred CcEEEEEccChhhHHHHHhh---------CcchhhccceEEEecCC
Q 003674 571 SKITLLTNGPLTNLAKILSS---------KKNATSLIQEVYIVGGH 607 (804)
Q Consensus 571 ~~vtIla~GPLTNLA~al~~---------~Pei~~~Ik~IviMGG~ 607 (804)
.+|.|++=|-...||.||.. .++|.+|| +||..++-
T Consensus 115 rPLwi~~WGG~ntlAqAL~~i~~~~~~~~~~~~~~Kl-rvy~I~dQ 159 (260)
T PF07632_consen 115 RPLWILVWGGTNTLAQALWDIKETRSPEEAARFVSKL-RVYSISDQ 159 (260)
T ss_dssp S-EEEEESS-SHHHHHHHHHHHHHS-HHHHHHHHHTE-EEEEES--
T ss_pred CCEEEEecCCHHHHHHHHHHHHHhcCHHHHHHHHhhE-EEEeccCC
Confidence 88999999999999999988 68899999 78887763
No 36
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=49.81 E-value=36 Score=33.86 Aligned_cols=72 Identities=24% Similarity=0.329 Sum_probs=52.3
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCH
Q 003674 556 ALEIWDSTTSTLEPGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDP 635 (804)
Q Consensus 556 A~~~~~~i~~~~~~~~~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DP 635 (804)
+..+.+.|.+ ..++||++.... +|..+...|++ +|+++||.+.. +...+..|
T Consensus 31 ~~~la~~L~~----~~~ltVvTnsl~--ia~~l~~~~~~-----~vi~~GG~~~~-----------------~~~~~~G~ 82 (161)
T PF00455_consen 31 TLELAKYLPD----KKNLTVVTNSLP--IANELSENPNI-----EVILLGGEVNP-----------------KSLSFVGP 82 (161)
T ss_pred HHHHHHHhhc----CCceEEEECCHH--HHHHHHhcCce-----EEEEeCCEEEc-----------------CCCcEECc
Confidence 3334455543 237999988754 78888888755 89999999864 45566778
Q ss_pred HHHHHHhhCCCcEEEecccc
Q 003674 636 LAAKTVFESPLNITLIPLGV 655 (804)
Q Consensus 636 eAA~~Vl~s~~~itlvpldv 655 (804)
.|.+.+-+-..++.+++-+.
T Consensus 83 ~a~~~l~~~~~d~afi~~~g 102 (161)
T PF00455_consen 83 IALEALRQFRFDKAFIGADG 102 (161)
T ss_pred hHHHHHHhhccceEEecccE
Confidence 89888888788888887653
No 37
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=47.51 E-value=52 Score=29.40 Aligned_cols=54 Identities=17% Similarity=0.290 Sum_probs=29.7
Q ss_pred cEEEecCCCchH-HHHHHHHHhCCCCceeEEEEEEeCCCCchHHHHHHHHHHHHHcCCCCCeEe
Q 003674 417 PVVFDMDMSVGD-FLALFYLLKAPVEVINLKAILVSPTGWANAATIDVIYDLLHMMGRDDVQVG 479 (804)
Q Consensus 417 kVIiDtD~G~DD-alAL~~aL~~p~~~i~LlgItv~Gn~~~~~a~~~~~~~vL~~~Gr~dIPV~ 479 (804)
.+|||+-+|.+| .++++-.+... ..+-|| +.... +...+++.++++.+..|||-
T Consensus 3 ~LiiD~PPGTgD~~l~~~~~~~~~----g~ivVT-TPq~l----a~~dv~r~~~~~~~~~vpil 57 (81)
T PF10609_consen 3 YLIIDLPPGTGDEHLTLMQYLPID----GAIVVT-TPQEL----ALADVRRAIDMFRKLNVPIL 57 (81)
T ss_dssp EEEEE--SCSSSHHHHHHHHH--S----EEEEEE--CCC------HHHHHHHHHHHHCTT-EEE
T ss_pred EEEEeCCCCCCcHHHHHHHhCCCC----eEEEEe-CCHHH----HHHHHHHHHHHHHhcCCCcE
Confidence 489999999655 55666555422 223233 23222 23457888999988899985
No 38
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional
Probab=46.20 E-value=55 Score=35.47 Aligned_cols=59 Identities=22% Similarity=0.419 Sum_probs=45.9
Q ss_pred cEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEe
Q 003674 572 KITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLI 651 (804)
Q Consensus 572 ~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlv 651 (804)
.+||++++. ++|..+...|++ +|+++||.+.. +.+.+..|.|.+.+=+-.+++.++
T Consensus 130 ~ltVvTnsl--~ia~~l~~~~~~-----~v~llGG~~~~-----------------~~~~~~G~~a~~~l~~~~~d~afi 185 (269)
T PRK09802 130 DVIAMTNGM--NVANALLEAEGV-----ELLMTGGHLRR-----------------QSQSFYGDQAEQSLQNYHFDMLFL 185 (269)
T ss_pred CeEEEeCCH--HHHHHHHhCCCC-----EEEEECCEEec-----------------CCCceECHHHHHHHHhccCCEEEE
Confidence 599998875 577777666765 79999999864 456677899988887777888888
Q ss_pred ccc
Q 003674 652 PLG 654 (804)
Q Consensus 652 pld 654 (804)
+-+
T Consensus 186 g~~ 188 (269)
T PRK09802 186 GVD 188 (269)
T ss_pred cCc
Confidence 765
No 39
>PRK13509 transcriptional repressor UlaR; Provisional
Probab=30.88 E-value=1.3e+02 Score=32.23 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=42.2
Q ss_pred cEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEe
Q 003674 572 KITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLI 651 (804)
Q Consensus 572 ~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlv 651 (804)
++||++++. ++|.++...|++ +++++||.+.. +.+.+..|. ++.+-+-.+++.++
T Consensus 116 ~ltVvTnsl--~ia~~l~~~~~~-----~v~l~GG~~~~-----------------~~~~~~G~~-~~~l~~~~~d~aFi 170 (251)
T PRK13509 116 PVQIITNYL--PLANYLIDQEHD-----SVIIMGGQYNK-----------------SQSITLSPQ-GSENSLYAGHWMFT 170 (251)
T ss_pred CeEEEeCCH--HHHHHHHhCCCC-----EEEEECCeEcC-----------------CcceeECHH-HHHHHhCcCCEEEE
Confidence 599998876 688888777765 79999999853 445667786 45443446788888
Q ss_pred cccc
Q 003674 652 PLGV 655 (804)
Q Consensus 652 pldv 655 (804)
+-+-
T Consensus 171 g~~g 174 (251)
T PRK13509 171 SGKG 174 (251)
T ss_pred CCCc
Confidence 7653
No 40
>PRK10906 DNA-binding transcriptional repressor GlpR; Provisional
Probab=30.37 E-value=1.5e+02 Score=31.86 Aligned_cols=59 Identities=15% Similarity=0.278 Sum_probs=44.3
Q ss_pred cEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEe
Q 003674 572 KITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLI 651 (804)
Q Consensus 572 ~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlv 651 (804)
.+||++.... +|..+...|++ +|++.||.+.. +...++.|.|.+.+=+-..++.++
T Consensus 115 ~ltVvTNsl~--ia~~l~~~~~~-----~villGG~~~~-----------------~~~~~~G~~a~~~l~~~~~d~afi 170 (252)
T PRK10906 115 NLRIVTNNLN--VANTLMAKEDF-----RIILAGGELRS-----------------RDGGIIGEATLDFISQFRLDFGIL 170 (252)
T ss_pred CcEEEECcHH--HHHHHhhCCCC-----EEEEECCEEec-----------------CCCccCCHHHHHHHHhccCCEEEE
Confidence 5999887654 67777666665 68999999864 445677888888887777888888
Q ss_pred ccc
Q 003674 652 PLG 654 (804)
Q Consensus 652 pld 654 (804)
+-+
T Consensus 171 ~~~ 173 (252)
T PRK10906 171 GIS 173 (252)
T ss_pred cCC
Confidence 764
No 41
>PRK10681 DNA-binding transcriptional repressor DeoR; Provisional
Probab=29.94 E-value=1.5e+02 Score=31.80 Aligned_cols=59 Identities=14% Similarity=0.079 Sum_probs=43.8
Q ss_pred cEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEe
Q 003674 572 KITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLI 651 (804)
Q Consensus 572 ~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlv 651 (804)
.+||+++... +|..+...|++ +|++.||.+.. +.+.+..+.|.+.+-+-.+++.++
T Consensus 116 ~ltvvTnsl~--i~~~l~~~~~~-----~villGG~~~~-----------------~~~~~~G~~~~~~l~~~~~D~afi 171 (252)
T PRK10681 116 PFTAVCYSLN--TFLALQEKPHC-----RAILCGGEFHA-----------------SNAIFKPLDFQQTLDNICPDIAFY 171 (252)
T ss_pred CeEEEECCHH--HHHHHhhCCCC-----EEEEECcEEec-----------------CcceeeCHHHHHHHHhhCCCEEEE
Confidence 5999988543 66677666765 79999999864 345677788887777767888888
Q ss_pred ccc
Q 003674 652 PLG 654 (804)
Q Consensus 652 pld 654 (804)
+-+
T Consensus 172 g~~ 174 (252)
T PRK10681 172 SAA 174 (252)
T ss_pred eCc
Confidence 764
No 42
>PF07632 DUF1593: Protein of unknown function (DUF1593); InterPro: IPR011483 This is a family of proteins found in Rhodopirellula baltica that are predicted to be secreted. Also, a member has been identified in Caulobacter crescentus (Caulobacter vibrioides) (Q9AAT9 from SWISSPROT). These proteins may be related to IPR001910 from INTERPRO.; PDB: 2YHG_A.
Probab=27.38 E-value=62 Score=35.09 Aligned_cols=48 Identities=8% Similarity=0.360 Sum_probs=38.7
Q ss_pred ccHHHHHHHHHc---CCCeEEEEccchhHHHHHHhh---------CCCchhccCcEEEEcC
Q 003674 84 LTAQQVLTDKIS---EGPITVILIGAHTNMGIFLMK---------NPHLKKNIEHIYAMGG 132 (804)
Q Consensus 84 ~~A~~~Li~~i~---~g~itIvaiGPLTNlA~al~~---------dP~l~~~ik~IviMGG 132 (804)
.++.++|++.+. +.+|-|.+=|-...||.||.. .+.|.+|+ +||..++
T Consensus 99 s~GS~lIi~~~~~~d~rPLwi~~WGG~ntlAqAL~~i~~~~~~~~~~~~~~Kl-rvy~I~d 158 (260)
T PF07632_consen 99 SEGSELIIEALDKDDPRPLWILVWGGTNTLAQALWDIKETRSPEEAARFVSKL-RVYSISD 158 (260)
T ss_dssp -HHHHHHHHHHHSS-SS-EEEEESS-SHHHHHHHHHHHHHS-HHHHHHHHHTE-EEEEES-
T ss_pred ChHHHHHHHHHcCCCCCCEEEEecCCHHHHHHHHHHHHHhcCHHHHHHHHhhE-EEEeccC
Confidence 578999999995 578999999999999999998 67888998 6777665
No 43
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=26.66 E-value=1.6e+02 Score=31.25 Aligned_cols=59 Identities=14% Similarity=0.350 Sum_probs=43.4
Q ss_pred cEEEEEccChhhHHHHHhhCcchhhccceEEEecCCCCCCCCCCCcccccCCCcccccCCCCCHHHHHHHhhCCCcEEEe
Q 003674 572 KITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLI 651 (804)
Q Consensus 572 ~vtIla~GPLTNLA~al~~~Pei~~~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~~Vl~s~~~itlv 651 (804)
++||++..+. +|..+...|++ ++++.||.+.. +.+.+..|.|.+.+=+-..+..++
T Consensus 116 ~ltVvTNs~~--ia~~l~~~~~~-----~vil~GG~~~~-----------------~~~~~~G~~a~~~l~~~~~d~afi 171 (240)
T PRK10411 116 NIQVFTNSHP--ICQELGKRERI-----QLISSGGTLER-----------------KYGCYVNPSLISQLKSLEIDLFIF 171 (240)
T ss_pred CeEEEeCCHH--HHHHHhcCCCC-----EEEEECCEEeC-----------------CCCceECHHHHHHHHhcCCCEEEE
Confidence 5888887764 66666666664 69999999864 456677788888776667787777
Q ss_pred ccc
Q 003674 652 PLG 654 (804)
Q Consensus 652 pld 654 (804)
+-+
T Consensus 172 s~~ 174 (240)
T PRK10411 172 SCE 174 (240)
T ss_pred ece
Confidence 654
No 44
>PF03054 tRNA_Me_trans: tRNA methyl transferase; InterPro: IPR004506 tRNA-specific 2-thiouridylase catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.; GO: 0016740 transferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 2DET_A 2DER_A 2DEU_A 2HMA_A.
Probab=21.54 E-value=2.8e+02 Score=31.53 Aligned_cols=59 Identities=14% Similarity=0.072 Sum_probs=35.2
Q ss_pred CcEEEecCCCchHHHHHHHHHhCCCCceeEEEEE-EeCCCCch-------HHHHHHHHHHHHHcCCCCCeEee
Q 003674 416 KPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWAN-------AATIDVIYDLLHMMGRDDVQVGL 480 (804)
Q Consensus 416 ~kVIiDtD~G~DDalAL~~aL~~p~~~i~LlgIt-v~Gn~~~~-------~a~~~~~~~vL~~~Gr~dIPV~~ 480 (804)
+||++=|-.|+|-++|.++|... ..+|.||+ ........ ...++.|+++.+.+| ||.+.
T Consensus 1 ~kV~vamSGGVDSsvaA~LLk~~---G~~V~Gv~m~~~~~~~~~~~~c~~~~d~~~a~~va~~Lg---Ip~~v 67 (356)
T PF03054_consen 1 KKVLVAMSGGVDSSVAAALLKEQ---GYDVIGVTMRNWDEEDESGKSCCSEEDIEDARRVAEKLG---IPHYV 67 (356)
T ss_dssp -EEEEE--SSHHHHHHHHHHHHC---T-EEEEEEEE-SS-SSSHH-HHHHHHHHHHHHHHHHHHT-----EEE
T ss_pred CeEEEEccCCHHHHHHHHHHHhh---cccceEEEEEEeccccccCCCCCchhhHHHHHHHHHhcC---CCEEE
Confidence 57999999999999998877775 49999998 33322111 112345677777765 67664
No 45
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional
Probab=21.19 E-value=3.7e+02 Score=29.06 Aligned_cols=73 Identities=14% Similarity=0.181 Sum_probs=45.4
Q ss_pred ccHHHHHHHHHcC-CCeEEEEccchhHHHHHHhhCCCchhccCcEEEEcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 003674 84 LTAQQVLTDKISE-GPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGDPGNL 162 (804)
Q Consensus 84 ~~A~~~Li~~i~~-g~itIvaiGPLTNlA~al~~dP~l~~~ik~IviMGG~~~~~~~~~~~p~~~~~~~~~~q~~~~GN~ 162 (804)
.+-...|++.+.. .++|||+... ++|..|...|++ +|++.||.+...
T Consensus 115 GtT~~~la~~L~~~~~ltVvTnsl--~ia~~l~~~~~~-----~v~llGG~~~~~------------------------- 162 (269)
T PRK09802 115 GTTTFEIARLMRKHTDVIAMTNGM--NVANALLEAEGV-----ELLMTGGHLRRQ------------------------- 162 (269)
T ss_pred chHHHHHHHhcCcCCCeEEEeCCH--HHHHHHHhCCCC-----EEEEECCEEecC-------------------------
Confidence 3444555665542 3477766553 556666666654 699999999752
Q ss_pred cccCCCCCccccccccCHHHHHHHHhCCCCEEEEcCC
Q 003674 163 FTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLD 199 (804)
Q Consensus 163 ~~~~~~~p~AEfN~~~DPeAA~iVl~sg~pitlvpld 199 (804)
.+.+..|.|.+.+=+-...+.+++-+
T Consensus 163 -----------~~~~~G~~a~~~l~~~~~d~afig~~ 188 (269)
T PRK09802 163 -----------SQSFYGDQAEQSLQNYHFDMLFLGVD 188 (269)
T ss_pred -----------CCceECHHHHHHHHhccCCEEEEcCc
Confidence 13346777777776656666666544
No 46
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=20.76 E-value=99 Score=33.53 Aligned_cols=42 Identities=19% Similarity=0.393 Sum_probs=25.9
Q ss_pred HHHHHHHHHcCCC--CCeEeecCCcccCCCCCCCCCCCCcccccccccCCCC
Q 003674 462 DVIYDLLHMMGRD--DVQVGLGDLFATNQSDPIDPSVGDCKYVKSIPHGCGG 511 (804)
Q Consensus 462 ~~~~~vL~~~Gr~--dIPV~~Ga~~pl~~~~~~~p~~~~~~~~~~~~hG~dG 511 (804)
..++++|+.++-- +|-.+-|...-+... ..++.+.+|||.+|
T Consensus 118 ~Ra~~fl~~~~~~~~~ie~ADgk~f~fG~t--------~IefS~pvpHG~eG 161 (304)
T COG2248 118 RRAYRFLESLKDIAREIEYADGKTFEFGGT--------VIEFSPPVPHGREG 161 (304)
T ss_pred HHHHHHHHHhhhhcceeEecCCceEEeCCE--------EEEecCCCCCCCcc
Confidence 4578888877732 555566655555332 12445567999986
Done!