Query 003674
Match_columns 804
No_of_seqs 353 out of 2700
Neff 6.2
Searched_HMMs 29240
Date Tue Mar 26 18:36:27 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003674.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1722-1726//hhsearch_pdb/003674hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yoe_A Hypothetical protein YB 1.0 1 1 471.5 24.8 303 411-775 9-320 (322)
2 1q8f_A Pyrimidine nucleoside h 1.0 1 1 469.5 24.7 300 413-776 1-309 (313)
3 3t8j_A Purine nucleosidase, (I 1.0 1 1 465.3 24.4 297 415-775 1-310 (311)
4 2mas_A Inosine-uridine nucleos 1.0 1 1 465.2 23.6 301 415-776 1-310 (314)
5 3fz0_A Nucleoside hydrolase, p 1.0 1 1 455.2 22.2 306 412-776 3-359 (360)
6 3t8i_A Purine nucleosidase, (I 1.0 1 1 453.5 21.8 294 415-774 1-305 (306)
7 3epw_A IAG-nucleoside hydrolas 1.0 1 1 442.9 12.5 316 411-775 9-337 (338)
8 2c40_A Inosine-uridine preferr 1.0 1 1 440.9 19.3 300 415-776 1-310 (312)
9 1yoe_A Hypothetical protein YB 1.0 1 1 366.7 19.1 218 1-295 66-287 (322)
10 2mas_A Inosine-uridine nucleos 1.0 1 1 366.5 17.7 218 1-294 54-275 (314)
No 1
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A*
Probab=1.00 E-value=1 Score=471.54 Aligned_cols=303 Identities=24% Similarity=0.358 Sum_probs=247.7
Q ss_pred CCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
Q ss_conf 778998099966999209999999980999940399999-8289981178899999999970999972750677666899
Q 003674 411 TRKLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQS 489 (804)
Q Consensus 411 ~~~~~kkVIiDtD~g~DDalAL~~lL~~p~~~idLlgIt-v~Gn~~~~~a~~~~a~~lL~~~Gr~dIPV~~Ga~~pl~~~ 489 (804)
+.+..+|||||||+|+||++||+|||.+| +++|+||| |+||.+.+++ .+|++++|+++||.+||||+|+..||..+
T Consensus 9 ~~~~~~~viiD~D~GiDDa~AL~~al~~p--~i~l~gIttv~GN~~~~~~-~~Na~~ll~~~g~~dIPV~~Ga~~Pl~~~ 85 (322)
T 1yoe_A 9 HHGSALPILLDCDPGHDDAIAIVLALASP--ELDVKAITSSAGNQTPEKT-LRNVLRMLTLLNRTDIPVAGGAVKPLMRE 85 (322)
T ss_dssp --CCCEEEEEEECCSHHHHHHHHHHHTCT--TEEEEEEEECSSSSCHHHH-HHHHHHHHHHTTCTTSCEEECCSSCSSSC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCC--CCEEEEEEECCCCCCHHHH-HHHHHHHHHHCCCCCCCEEECCCCCCCCC
T ss_conf 46877669997999879999999997589--9879999981799878999-99999999982999987786888545688
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHCC
Q ss_conf 99999988765334546689999996433576557999986667545334589999999877811399999-99873308
Q 003674 490 DPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIW-DSTTSTLE 568 (804)
Q Consensus 490 ~~~~p~~~~~~~~~~~~hG~~Gl~d~~~l~gl~~~lp~~~~~~~~e~av~~g~~~~t~~~~~~~p~A~e~~-~~i~~~~~ 568 (804)
.. . ...+||.+||++. .+|++....+ ...|++++ +.++ +
T Consensus 86 ~~---------~-a~~~HG~~Glg~~--------~~p~~~~~~~-------------------~~~Av~~i~~~l~---~ 125 (322)
T 1yoe_A 86 LI---------I-ADNVHGESGLDGP--------ALPEPTFAPQ-------------------NCTAVELMAKTLR---E 125 (322)
T ss_dssp CC---------C-C-----CCSSCSS--------CCCCCSSCCC-------------------SSCHHHHHHHHHH---H
T ss_pred CC---------C-CCCCCCCCCCCCC--------CCCCCCCCCC-------------------CCHHHHHHHHHHH---H
T ss_conf 76---------6-4345898888886--------8898767778-------------------6339999999998---5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE
Q ss_conf 99958999805723599999519514520246799347778898889961025899645457779999999986189947
Q 003674 569 PGSKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNI 648 (804)
Q Consensus 569 ~~~~ItIlaiGPLTNLA~al~~~Pel~s~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~iVl~s~~~i 648 (804)
++++||||++|||||||.|++++|++.++|++||+|||++.. ||++ +.||||+++||+||++||+|++|+
T Consensus 126 ~p~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGGa~~~-----GN~t-----p~AEfN~~~DPeAA~~V~~s~~~i 195 (322)
T 1yoe_A 126 SAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGL-----GNWT-----PAAEFNIYVDPEAAEIVFQSGIPV 195 (322)
T ss_dssp CSSCEEEEECSCSHHHHHHHHHCGGGGGGEEEEEEECCCSSC-----CSSS-----SSCCHHHHHCHHHHHHHHTSSSCE
T ss_pred CCCCEEEEEECCHHHHHHHHHHCHHHHHHCCEEEEECCCCCC-----CCCC-----CCCHHHCCCCHHHHHHHHHCCCCE
T ss_conf 899879998054889999999796779658989991799878-----8888-----641765243999999998279988
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC-E--
Q ss_conf 9954663321147999999998029990789999999999999974124455531135606689984356654343-6--
Q 003674 649 TLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT-V-- 725 (804)
Q Consensus 649 tlvpldvT~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~LaAv~l~~~~~~l~p~-f-- 725 (804)
+|+|||+|+++.++++++++|.+.+ ++.++|+.+++++|++++... .|...+.++||++|+++ +++|+ |
T Consensus 196 ~~v~ldvt~~~~~t~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~lhD~lava~------~~~P~~~~~ 267 (322)
T 1yoe_A 196 VMAGLDVTHKAQIHVEDTERFRAIG-NPVSTIVAELLDFFLEYHKDE-KWGFVGAPLHDPCTIAW------LLKPELFTS 267 (322)
T ss_dssp EEECHHHHTTSEECHHHHHHHHHHC-SHHHHHHHHHHHHHHC------CCCCSSEECCTHHHHHH------HHCGGGEEE
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHH------EECCCCEEE
T ss_conf 9977442336447999999998659-919999999999999987640-05878875563788553------156112588
Q ss_pred EEEEEEEEECCCCCCCCEEEEECCC----CCCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 9999999972685455419995499----9646999822999999999999832
Q 003674 726 QVKSIKVIAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANELNS 775 (804)
Q Consensus 726 ~~~~v~Ve~~~~~~~~G~tv~d~~~----~~~v~v~~~VD~~~f~~~l~~~L~~ 775 (804)
+..+++|++++ ++++|+|++|+.. .+|++|+.+||.++|+++|.++|..
T Consensus 268 ~~~~v~Ve~~g-~~t~G~tv~d~~~~~~~~~n~~v~~~vD~~~f~~~~~~~l~~ 320 (322)
T 1yoe_A 268 VERWVGVETQG-KYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFVDLLADRLKF 320 (322)
T ss_dssp EEECEEECCSC-SSCTTCEEECTTCCSSCCCCEEEEEEECHHHHHHHHHHHHGG
T ss_pred EEEEEEEEECC-CCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 99879999589-877854998555567998786997405899999999999875
No 2
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A*
Probab=1.00 E-value=1 Score=469.46 Aligned_cols=300 Identities=21% Similarity=0.252 Sum_probs=247.2
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
Q ss_conf 8998099966999209999999980999940399999-828998117889999999997099997275067766689999
Q 003674 413 KLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDP 491 (804)
Q Consensus 413 ~~~kkVIiDtD~g~DDalAL~~lL~~p~~~idLlgIt-v~Gn~~~~~a~~~~a~~lL~~~Gr~dIPV~~Ga~~pl~~~~~ 491 (804)
|+++|||||||+|+||++||+|||.+| +++|+||| |+||.+.+++ .+|++++|++ ||.+||||+|+..||..+..
T Consensus 1 M~~~~vIiDtD~GiDDa~Al~~al~~p--~i~l~gIt~v~GN~~~~~~-~~na~~ll~~-g~~dIPV~~Ga~~pl~~~~~ 76 (313)
T 1q8f_A 1 MEKRKIILDCDPGHDDAIAIMMAAKHP--AIDLLGITIVAGNQTLDKT-LINGLNVCQK-LEINVPVYAGMPQPIMRQQI 76 (313)
T ss_dssp --CEEEEEEECCCHHHHHHHHHHHHCT--TEEEEEEEECSSSSCHHHH-HHHHHHHHHH-TTCCCCEEECCSSCSSSCCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC--CCEEEEEEECCCCCCHHHH-HHHHHHHHHC-CCCCCCEEECCCCCCCCCCC
T ss_conf 998669998999858999999997589--9889999986688789999-9999999973-99998878699865668987
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHCCCC
Q ss_conf 999988765334546689999996433576557999986667545334589999999877811399999-9987330899
Q 003674 492 IDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIW-DSTTSTLEPG 570 (804)
Q Consensus 492 ~~p~~~~~~~~~~~~hG~~Gl~d~~~l~gl~~~lp~~~~~~~~e~av~~g~~~~t~~~~~~~p~A~e~~-~~i~~~~~~~ 570 (804)
.+ ..+||.+||++. .+|++.+..+ ...|++++ +.++ +++
T Consensus 77 ---------~a-~~~hG~~Glg~~--------~~p~~~~~~~-------------------~~~A~~~i~~~~~---~~~ 116 (313)
T 1q8f_A 77 ---------VA-DNIHGDTGLDGP--------VFEPLTRQAE-------------------STHAVKYIIDTLM---ASD 116 (313)
T ss_dssp ---------CC-HHHHCTTSSCSC--------CCCCCCCCCC-------------------SSCHHHHHHHHHH---HSC
T ss_pred ---------CC-CCCCCCCCCCCC--------CCCCCCCCCC-------------------CCCHHHHHHHHHH---HCC
T ss_conf ---------84-334777678988--------8998766778-------------------8759999999999---689
Q ss_pred CCEEEEECCCHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 95899980572359999951951452024679934777889888996102589964545777999999998618994799
Q 003674 571 SKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITL 650 (804)
Q Consensus 571 ~~ItIlaiGPLTNLA~al~~~Pel~s~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~iVl~s~~~itl 650 (804)
++|||+++|||||||.|++++|++.++|++||+|||++.. ||++ +.||||+++||+||++||+|+++++|
T Consensus 117 ~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGG~~~~-----GN~t-----p~aEfN~~~DPeAA~~V~~s~~~i~~ 186 (313)
T 1q8f_A 117 GDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGT-----GNFT-----PSAEFNIFADPEAARVVFTSGVPLVM 186 (313)
T ss_dssp SCEEEEECSCSHHHHHHHHHCGGGGGGEEEEEEECCCSSC-----CSSS-----SSCCHHHHTCHHHHHHHHTSCSCEEE
T ss_pred CCEEEEEECCHHHHHHHHHHCHHHHHHCCEEEEECCCCCC-----CCCC-----CHHHHHHCCCHHHHHHHHHCCCCEEE
T ss_conf 9879999265889999999797789768979997998878-----8898-----20487601299999999828998899
Q ss_pred ECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC-E--EE
Q ss_conf 54663321147999999998029990789999999999999974124455531135606689984356654343-6--99
Q 003674 651 IPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT-V--QV 727 (804)
Q Consensus 651 vpldvT~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~LaAv~l~~~~~~l~p~-f--~~ 727 (804)
+|||+|+++.++++++++|.+.+ ++.++|+.+++.+|.+++... +...+.++||++|++++ ++|+ | +.
T Consensus 187 v~ldvt~~~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~~g~~lhD~lava~~------~~p~~~~~~~ 257 (313)
T 1q8f_A 187 MGLDLTNQTVCTPDVIARMERAG-GPAGELFSDIMNFTLKTQFEN--YGLAGGPVHDATCIGYL------INPDGIKTQE 257 (313)
T ss_dssp ECHHHHGGGEECHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHH--HCCSSEECTTHHHHHHH------HCGGGEEEEE
T ss_pred ECHHHHHCCCCCHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHH------CCCCEEEEEE
T ss_conf 67535514168999999998609-969999999999999999860--48687766619999998------1812158999
Q ss_pred EEEEEEECCCCCCCCEEEEECCC----CCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 99999972685455419995499----96469998229999999999998321
Q 003674 728 KSIKVIAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANELNSK 776 (804)
Q Consensus 728 ~~v~Ve~~~~~~~~G~tv~d~~~----~~~v~v~~~VD~~~f~~~l~~~L~~~ 776 (804)
.+++|++++ ++++|+|++|+.+ .++++|+.++|.++|+++|.++|...
T Consensus 258 ~~v~Ve~~g-~~t~G~tv~d~~~~~~~~~n~~v~~~vD~~~f~~~~~~~l~~~ 309 (313)
T 1q8f_A 258 MYVEVDVNS-GPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGY 309 (313)
T ss_dssp ECEEECCCS-STTTTCEEECTTCTTCCCCCEEEEEEECHHHHHHHHHHHHHTT
T ss_pred EEEEEEECC-CCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 879999489-8779768984555689997879997227999999999999876
No 3
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus}
Probab=1.00 E-value=1 Score=465.27 Aligned_cols=297 Identities=19% Similarity=0.225 Sum_probs=243.4
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 98099966999209999999980999940399999-82899811788999999999709999727506776668999999
Q 003674 415 GKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPID 493 (804)
Q Consensus 415 ~kkVIiDtD~g~DDalAL~~lL~~p~~~idLlgIt-v~Gn~~~~~a~~~~a~~lL~~~Gr~dIPV~~Ga~~pl~~~~~~~ 493 (804)
+||||||||+|+||++||+|| .+| +++|+||| |+||.+.+++ ..|++++|+++|+ +||||+|+..||..+..
T Consensus 1 M~kvIiDtD~G~DDa~Al~~a-~~p--~iel~gIttv~GN~~~~~~-~~Na~~ll~~~g~-diPV~~Ga~~Pl~~~~~-- 73 (311)
T 3t8j_A 1 MRHFIIDCDTAEDDVLSLYLL-LKN--NIDVVAVTIVEGNISYEQE-VKNALWALEQVNR-EIPVYPGANKPLLKNYI-- 73 (311)
T ss_dssp CCEEEEEECCSHHHHHHHHHH-HHT--TCEEEEEEECSSSSCHHHH-HHHHHHHHHHTTC-CCCEEECCSSCSSSCCC--
T ss_pred CCEEEEECCCCHHHHHHHHHH-CCC--CCEEEEEEECCCCCCHHHH-HHHHHHHHHHCCC-CCCEEECCCCCCCCCCC--
T ss_conf 966999799983899999997-099--9889999982598889999-9999999997399-98779778977778776--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHCCCCCC
Q ss_conf 9988765334546689999996433576557999986667545334589999999877811399999-998733089995
Q 003674 494 PSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIW-DSTTSTLEPGSK 572 (804)
Q Consensus 494 p~~~~~~~~~~~~hG~~Gl~d~~~l~gl~~~lp~~~~~~~~e~av~~g~~~~t~~~~~~~p~A~e~~-~~i~~~~~~~~~ 572 (804)
. ...+||.+||++. .+|++....+ ...|++++ +.++ +++++
T Consensus 74 -------~-a~~~hG~~Glg~~--------~~p~~~~~~~-------------------~~~A~~~i~~~~~---~~~~~ 115 (311)
T 3t8j_A 74 -------T-VEKVHGKGGIGDV--------TVEPKRLKAQ-------------------EKHAALAIIDLAN---EYAGE 115 (311)
T ss_dssp -------C-CHHHHCTTSSSSC--------CCCCSSCCCC-------------------SSCHHHHHHHHHH---HTTTT
T ss_pred -------C-CHHHCCCCCCCCC--------CCCCCCCCCC-------------------CCHHHHHHHHHHH---HCCCC
T ss_conf -------6-3211488887877--------8898777778-------------------8209999999998---58997
Q ss_pred EEEEECCCHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 89998057235999995195145202467993477788988899610258996454577799999999861899479954
Q 003674 573 ITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIP 652 (804)
Q Consensus 573 ItIlaiGPLTNLA~al~~~Pel~s~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~iVl~s~~~itlvp 652 (804)
|||+++|||||||.|++++|++.++|++||+|||++.. .||++ +.+|||+++||+||++||+|+++++|+|
T Consensus 116 vtiva~GpLTNlA~al~~~P~i~~~i~~iviMGG~~~~----~GN~t-----p~aEfN~~~DPeAA~~V~~sg~~i~~v~ 186 (311)
T 3t8j_A 116 LEFLAISPLTNLALAYLLDNSIVKKIKKVWVMGGAVFG----IGNIT-----PVAEFNIWVDPDAAKIVFNAGFDITMIP 186 (311)
T ss_dssp EEEEECSCSHHHHHHHHHCTTHHHHEEEEEEECCCTTS----CCSSS-----SSCCHHHHHCHHHHHHHHHTTCCEEEEC
T ss_pred EEEEEECCHHHHHHHHHHCHHHHHHCCEEEECCCCCCC----CCCCC-----CHHHHCCCCCHHHHHHHHHCCCCEEEEC
T ss_conf 69999447178999999796788651999992786668----99988-----5246402559999999994899879946
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC-E---EEE
Q ss_conf 663321147999999998029990789999999999999974124455531135606689984356654343-6---999
Q 003674 653 LGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT-V---QVK 728 (804)
Q Consensus 653 ldvT~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~LaAv~l~~~~~~l~p~-f---~~~ 728 (804)
||+|++..++++++++|.+.+ ++.++|+.++++.|.+++.....+ .+..+||++|+++ +++|+ | +..
T Consensus 187 ldvt~~~~lt~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~g~--~g~~lhD~lava~------~l~P~l~~~~~~~ 257 (311)
T 3t8j_A 187 WDVIINYPVTDEEWNVIKNMK-TRMSELYVSMYLHYRQYSSTVQKI--NGHPHPDAITTAI------AIDGSIATRREKR 257 (311)
T ss_dssp HHHHTTSCBCHHHHHHHHTSC-SHHHHHHHHHHHHHHHHHHHTSCC--SSBCCHHHHHHHH------HHCGGGEEEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCHHHHHH------HHCHHHHHCCCEE
T ss_conf 532124047999999998619-989999999999999987763587--8886767999999------9397886022504
Q ss_pred EEEEEECCCCCCCCEEEEECCC-------CCCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 9999972685455419995499-------9646999822999999999999832
Q 003674 729 SIKVIAEGNEYKDGQTVIDKNQ-------GIFVRVIENLDPEAYYDLFANELNS 775 (804)
Q Consensus 729 ~v~Ve~~~~~~~~G~tv~d~~~-------~~~v~v~~~VD~~~f~~~l~~~L~~ 775 (804)
+++||+++ ++++|+|++|+.+ .+|++|++++|.++|+++|.++|..
T Consensus 258 ~v~Ve~~g-~~t~G~tv~d~~~~~~~~~~~~n~~v~~~vD~~~f~~~~~~~l~~ 310 (311)
T 3t8j_A 258 FVVIDNTD-NITRGMTLVDRFDADTSWSDKPNAEIVYEINKKSFMEKIYDLLNW 310 (311)
T ss_dssp EEEECCSS-STTTTCEEEECSCSSSCSCSSCCEEEEEEECHHHHHHHHHHHHTC
T ss_pred EEEEECCC-CCCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 69985579-877706998527776667999878996115799999999999852
No 4
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A
Probab=1.00 E-value=1 Score=465.17 Aligned_cols=301 Identities=22% Similarity=0.292 Sum_probs=246.6
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 98099966999209999999980999940399999-82899811788999999999709999727506776668999999
Q 003674 415 GKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPID 493 (804)
Q Consensus 415 ~kkVIiDtD~g~DDalAL~~lL~~p~~~idLlgIt-v~Gn~~~~~a~~~~a~~lL~~~Gr~dIPV~~Ga~~pl~~~~~~~ 493 (804)
.+|||||||+|+||++||+|+|.+| +++|+||| |+||.+.+++ .+|++++|+++||.+||||+|+.+||..+..
T Consensus 1 ~~~vIiDtD~GiDDa~AL~~al~~p--~i~l~gIt~v~GN~~~~~~-~~na~~ll~~~g~~dIPV~~Ga~~pl~~~~~-- 75 (314)
T 2mas_A 1 AKKIILDCDPGLDDAVAILLAHGNP--EIELLAITTVVGNQTLAKV-TRNAQLVADIAGITGVPIAAGCDKPLVRKIM-- 75 (314)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHCT--TEEEEEEEECSSSSCHHHH-HHHHHHHHHHTTCCSCCEEECCSSCSSSCCC--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CCEEEEEEECCCCCCHHHH-HHHHHHHHHHHCCCCCCEEECCCCCCCCCCC--
T ss_conf 9879997999869999999998589--9889999984688689999-9999999998288998888598754579987--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHCCCCCC
Q ss_conf 9988765334546689999996433576557999986667545334589999999877811399999-998733089995
Q 003674 494 PSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIW-DSTTSTLEPGSK 572 (804)
Q Consensus 494 p~~~~~~~~~~~~hG~~Gl~d~~~l~gl~~~lp~~~~~~~~e~av~~g~~~~t~~~~~~~p~A~e~~-~~i~~~~~~~~~ 572 (804)
.+ ..+||.+||++. .+|++.... .....|++++ +.+++ .++++
T Consensus 76 -------~a-~~~hG~~Glg~~--------~~p~~~~~~------------------~~~~~A~~~i~~~~~~--~~~~~ 119 (314)
T 2mas_A 76 -------TA-GHIHGESGMGTV--------AYPAEFKNK------------------VDERHAVNLIIDLVMS--HEPKT 119 (314)
T ss_dssp -------CC-HHHHCSSSSTTC--------CCCSSCSSC------------------BCSSCHHHHHHHHHHH--SCTTC
T ss_pred -------CC-CCCCCCCCCCCC--------CCCCCCCCC------------------CCCCCHHHHHHHHHHH--HCCCC
T ss_conf -------85-446887788987--------899865345------------------6776399999999984--48998
Q ss_pred EEEEECCCHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 89998057235999995195145202467993477788988899610258996454577799999999861899479954
Q 003674 573 ITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIP 652 (804)
Q Consensus 573 ItIlaiGPLTNLA~al~~~Pel~s~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~iVl~s~~~itlvp 652 (804)
||||++|||||||.|++++|++.++|++||+|||++. .||++ +.||||+++||+||++||+|++|++|+|
T Consensus 120 vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGG~~~-----~GN~t-----p~aEfN~~~DPeAA~~V~~s~~~i~~v~ 189 (314)
T 2mas_A 120 ITLVPTGGLTNIAMAARLEPRIVDRVKEVVLMGGGYH-----EGNAT-----SVAEFNIIIDPEAAHIVFNESWQVTMVG 189 (314)
T ss_dssp EEEEECSCSHHHHHHHHHCTHHHHHSCEEEEECCCSS-----CCSSS-----SSCCHHHHTCHHHHHHHHHSSSCEEEEC
T ss_pred EEEEEECCHHHHHHHHHHCHHHHHHCCEEEEECCCCC-----CCCCC-----CHHHHHHHCCHHHHHHHHHCCCCEEEEC
T ss_conf 7999915588999999879668964778999689666-----89999-----5148872029999999982799879967
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC-EE--EEE
Q ss_conf 663321147999999998029990789999999999999974124455531135606689984356654343-69--999
Q 003674 653 LGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT-VQ--VKS 729 (804)
Q Consensus 653 ldvT~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~LaAv~l~~~~~~l~p~-f~--~~~ 729 (804)
||+|+++.++.+++++|...+ ++.++|+.+++++|.++++....+ .+.++||++|+++ +++|+ |+ ..+
T Consensus 190 ldvt~~~~~t~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~g~--~~~~lhD~lava~------~~~p~~~~~~~~~ 260 (314)
T 2mas_A 190 LDLTHQALATPPILQRVKEVD-TNPARFMLEIMDYYTKIYQSNRYM--AAAAVHDPCAVAY------VIDPSVMTTERVP 260 (314)
T ss_dssp HHHHTTCEECHHHHHHHHTTC-SHHHHHHHHHHHHHHHHHHSTTCC--SSEECCHHHHHHH------HHCGGGEEEEECC
T ss_pred HHHHCCCCCCHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCHHHHHH------HCCHHHEEEEEEE
T ss_conf 434346066999999998509-949999999999999998862587--8775773999999------8581215899975
Q ss_pred EEEEECCCCCCCCEEEEECCC----CCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 999972685455419995499----96469998229999999999998321
Q 003674 730 IKVIAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANELNSK 776 (804)
Q Consensus 730 v~Ve~~~~~~~~G~tv~d~~~----~~~v~v~~~VD~~~f~~~l~~~L~~~ 776 (804)
++|++++ .+++|+|++|+.+ .++++|+.++|.++|+++|.++|...
T Consensus 261 v~Ve~~g-~~t~G~tv~d~~~~~~~~~~~~v~~~vD~~~f~~~~~~~l~~~ 310 (314)
T 2mas_A 261 VDIELTG-KLTLGMTVADFRNPRPEHCHTQVAVKLDFEKFWGLVLDALERI 310 (314)
T ss_dssp EEECSSC-SSCTTCEEECCCSSCCSSCSEEEEEEECHHHHHHHHHHHHHHH
T ss_pred EEEEECC-CCCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 9999699-8778449985544579997889973068999999999999741
No 5
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei}
Probab=1.00 E-value=1 Score=455.15 Aligned_cols=306 Identities=21% Similarity=0.233 Sum_probs=244.0
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
Q ss_conf 78998099966999209999999980999940399999-82899811788999999999709999727506776668999
Q 003674 412 RKLGKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSD 490 (804)
Q Consensus 412 ~~~~kkVIiDtD~g~DDalAL~~lL~~p~~~idLlgIt-v~Gn~~~~~a~~~~a~~lL~~~Gr~dIPV~~Ga~~pl~~~~ 490 (804)
.|+++|||||||+|+||++||+|||.+| +++|+||| |+||.+.+++ ..|++++|+++|+ +||||+|+..||..+
T Consensus 3 ~m~~~kvIiD~D~G~DDa~Al~~al~~p--~i~l~gIt~v~GN~~~~~~-~~na~~ll~~~g~-dIPV~~Ga~~pl~~~- 77 (360)
T 3fz0_A 3 HMVHRKLIIDTDCGGDDAIAIMLAMTQP--DVEVIAITVVWGNVEVNQG-MENIGKLLDLYDA-DIPFFRGAEGPLVGE- 77 (360)
T ss_dssp --CEEEEEEEECCCHHHHHHHHHHHTST--TEEEEEEEECCSSSCHHHH-HHHHHHHHHHHTC-CCCEEECCSSCSSSS-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC--CCEEEEEEEECCCCCHHHH-HHHHHHHHHHCCC-CCCEEECCCCCCCCC-
T ss_conf 8778559998999868999999997689--9889999990598889999-9999999998099-988897479888898-
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHC
Q ss_conf 9999988765334546--689999996433576557999986667545334589999999877811399999-9987330
Q 003674 491 PIDPSVGDCKYVKSIP--HGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIW-DSTTSTL 567 (804)
Q Consensus 491 ~~~p~~~~~~~~~~~~--hG~~Gl~d~~~l~gl~~~lp~~~~~~~~e~av~~g~~~~t~~~~~~~p~A~e~~-~~i~~~~ 567 (804)
. . ...+ ||.+||++. .+|++++.. ......|++++ +.+++
T Consensus 78 ~---------~-~~~~~~hG~~Glg~~--------~~p~~~~~~-----------------~~~~~~A~~~i~~~~~~-- 120 (360)
T 3fz0_A 78 R---------E-TVQWGGFGSDGFGDA--------GFPPSQRVA-----------------LQPKRHAALEILKILEE-- 120 (360)
T ss_dssp C---------C-SCCCCTTCTTSSCSC--------CCCCCSHHH-----------------HSCCSCHHHHHHHHHHH--
T ss_pred C---------C-HHHHHHHCCCCCCCC--------CCCCCCCCC-----------------CCCCCCHHHHHHHHHHH--
T ss_conf 6---------6-278875055676766--------589875545-----------------66774099999999985--
Q ss_pred CCCCC---EEEEECCCHHHHHHHHHHCCCHHHCC-----CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 89995---89998057235999995195145202-----46799347778898889961025899645457779999999
Q 003674 568 EPGSK---ITLLTNGPLTNLAKILSSKKNATSLI-----QEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAK 639 (804)
Q Consensus 568 ~~~~~---ItIlaiGPLTNLA~al~~~Pel~s~I-----k~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~ 639 (804)
..+++ |||+++|||||||.|++++|++.++| ++||+|||++.. .||++ +.+|||+++||+||+
T Consensus 121 ~~p~~~~~vtiva~GPLTNlA~al~~~P~~~~~ig~~kv~~iviMGG~~~~----~GN~t-----p~aEfN~~~DPeAA~ 191 (360)
T 3fz0_A 121 AEPSDDVVYQLVALGPLTNVALALRLNPDLFSKLGTDTIPGIVIMNGTSES----KGNSN-----MAAEFNSHCDPEAGV 191 (360)
T ss_dssp CCCCSSEEEEEEECSCSHHHHHHHHHCGGGGGGSSCSSSCSEEEECCCSSC----CCSSS-----SSCCHHHHHCHHHHH
T ss_pred CCCCCCCEEEEEEECCHHHHHHHHHHCHHHHHHHCCCCCCEEEEECCCCCC----CCCCC-----CCCCCCCCCCHHHHH
T ss_conf 399988538999814707899999969677755331447679997787667----88989-----775425573999999
Q ss_pred HHHHC-CC--CEEEECCCCCCCCCCCHHHHHHHHHCCCCH-HH----------HHHHHHHHHHHHHHHHCC-C---C---
Q ss_conf 98618-99--479954663321147999999998029990-78----------999999999999997412-4---4---
Q 003674 640 TVFES-PL--NITLIPLGVQRKVSSFPKILRRLCLKNKTP-EA----------QFAQHLLSRLSHLQQTHY-R---Y--- 698 (804)
Q Consensus 640 iVl~s-~~--~itlvpldvT~~~~~t~~~l~~L~~~~~tp-~a----------~~l~~ll~~~~~~~~~~~-~---~--- 698 (804)
+||+| ++ +|+|+|||+|+++.++.+++++|.+.+ ++ .+ +|+.+++++|.++++... . +
T Consensus 192 ~V~~s~g~~~~i~~v~ldvt~~~~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~ 270 (360)
T 3fz0_A 192 VVLQHKGWKCPVQLVNWEVTVNSPMTWGFYDKLVNRE-STPNGRVAVNQNKWQEFIEKLFQRLEAFTRIHDDGTRADTGD 270 (360)
T ss_dssp HHHHCSCCSSCEEEECHHHHHTSCEEHHHHHHHTTC------------CCHHHHHHHHHHHHHHHHHC------------
T ss_pred HHHHCCCCCCCEEEECCCCEEEEECCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 9983768899969977110012635999999998448-976543222333599999999999999876420232223565
Q ss_pred ---CCC-CCCCCCEEEEEEEECCCCCCCCC-EE---EEEEEEEECCCCCCCCEEEEECCCC----------CCEEEEEEC
Q ss_conf ---555-31135606689984356654343-69---9999999726854554199954999----------646999822
Q 003674 699 ---HHM-EIFLGEILGAVALAGDNSLLKPT-VQ---VKSIKVIAEGNEYKDGQTVIDKNQG----------IFVRVIENL 760 (804)
Q Consensus 699 ---~~~-d~~l~D~LaAv~l~~~~~~l~p~-f~---~~~v~Ve~~~~~~~~G~tv~d~~~~----------~~v~v~~~V 760 (804)
.+. ...+||++|+++ +++|+ |+ ..+++||+++ .+++|+|++|+.+. +|++|+++|
T Consensus 271 ~~~~g~~~~~lHD~lava~------~l~P~l~~~~~~~~V~Ve~~g-~~trG~Tv~D~~~~~~~~~~~~~~~n~~V~~~v 343 (360)
T 3fz0_A 271 AEATQDVTCVVPDAVAVLV------AIRPESVLDSFLTYVTVELHG-RETRGATCIDWYGTEQSMAKKGRWRNCNVITKV 343 (360)
T ss_dssp ------CEECCHHHHHHHH------HHCGGGEEEEEEECEEECSSC-SSCTTCEEECSSCCHHHHHHTTCCCCEEEEEEE
T ss_pred CCCCCCCCCCCCCHHHHHH------HHCHHHEEEEEEEEEEEEECC-CCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 4446757776664999999------908003346899989999679-975237886155355764435799873996722
Q ss_pred CHHHHHHHHHHHHHCC
Q ss_conf 9999999999998321
Q 003674 761 DPEAYYDLFANELNSK 776 (804)
Q Consensus 761 D~~~f~~~l~~~L~~~ 776 (804)
|.++|+++|.++|...
T Consensus 344 D~~~f~~~~~~~l~~~ 359 (360)
T 3fz0_A 344 DNEMFLKALRDIVEYV 359 (360)
T ss_dssp CHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHCCC
T ss_conf 7999999999986126
No 6
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus}
Probab=1.00 E-value=1 Score=453.50 Aligned_cols=294 Identities=21% Similarity=0.279 Sum_probs=239.3
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 98099966999209999999980999940399999-82899811788999999999709999727506776668999999
Q 003674 415 GKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPID 493 (804)
Q Consensus 415 ~kkVIiDtD~g~DDalAL~~lL~~p~~~idLlgIt-v~Gn~~~~~a~~~~a~~lL~~~Gr~dIPV~~Ga~~pl~~~~~~~ 493 (804)
+||||||||+|+||++||++++ + +++|+||| |+||.+.+++ ..|++++|+++|+.+||||+|+.+||..+.
T Consensus 1 M~kvIiD~D~G~DDa~Allla~--~--~~~l~gIt~v~GN~~~~~~-~~na~~~l~~~g~~diPV~~Ga~~pl~~~~--- 72 (306)
T 3t8i_A 1 MRKVIVDSDTATDDTIAILLAS--R--FFQLLGVTIVAGNVNYNQE-VKNALFTLEYIGKQDVPVYLGSQRPILGNW--- 72 (306)
T ss_dssp CCEEEEEECCSTHHHHHHHHHH--H--HSEEEEEEECSSSSCHHHH-HHHHHHHHHHTTCTTSCEEECCSSCTTCCC---
T ss_pred CCEEEEECCCCHHHHHHHHHHC--C--CCEEEEEEECCCCCCHHHH-HHHHHHHHHHCCCCCCCEEECCCCCCCCCC---
T ss_conf 9679997999848999999867--9--9889999981699879999-999999998539999838985896677877---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHCCCCCC
Q ss_conf 9988765334546689999996433576557999986667545334589999999877811399999-998733089995
Q 003674 494 PSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIW-DSTTSTLEPGSK 572 (804)
Q Consensus 494 p~~~~~~~~~~~~hG~~Gl~d~~~l~gl~~~lp~~~~~~~~e~av~~g~~~~t~~~~~~~p~A~e~~-~~i~~~~~~~~~ 572 (804)
.. ....||.+||++. .+|++....+ ...|++++ +.++ +++++
T Consensus 73 ------~~-~~~~hG~~Glg~~--------~~p~~~~~~~-------------------~~~A~~~i~~~~~---~~~~~ 115 (306)
T 3t8i_A 73 ------RT-VEEVHGSNGMSNW--------NYPEPNKRPE-------------------KEHAIDAILRLSK---EHEGE 115 (306)
T ss_dssp ------CC-CHHHHCTTSSTTC--------CCCCCSCCCC-------------------SSCHHHHHHHHHH---HTTTT
T ss_pred ------CC-CCCCCCCCCCCCC--------CCCCCCCCCC-------------------CCCHHHHHHHHHH---HCCCC
T ss_conf ------56-2002688887766--------7898667767-------------------7439999999998---48997
Q ss_pred EEEEECCCHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 89998057235999995195145202467993477788988899610258996454577799999999861899479954
Q 003674 573 ITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITLIP 652 (804)
Q Consensus 573 ItIlaiGPLTNLA~al~~~Pel~s~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~iVl~s~~~itlvp 652 (804)
|||+++|||||||.|++++|++.++|++||+|||++. .||++ +.+|||+++||+||++||+|+++++|+|
T Consensus 116 vtiva~GpLTNlA~al~~~P~i~~~i~~iviMGG~~~-----~GN~t-----p~aEfN~~~DPeAA~~V~~s~~~i~~v~ 185 (306)
T 3t8i_A 116 LEILAISPLTNIALAYLKDPSVVKRVKKIWIMGGAFS-----KGNTT-----PIAEFNFWVDPEAAKIVLDAGFDITIVP 185 (306)
T ss_dssp EEEEECSCSHHHHHHHHHCGGGGGTCCEEEEECCCSS-----CCSSS-----SSCCHHHHHCHHHHHHHHHTTCCEEEEC
T ss_pred EEEEEECCHHHHHHHHHHCHHHHHHCCEEEEECCCCC-----CCCCC-----CCHHHCCCCCHHHHHHHHHCCCCCEEEC
T ss_conf 7999814727899999879668865699999169888-----99999-----7435303429999999995799956845
Q ss_pred CCCCCCC-CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC--E--EE
Q ss_conf 6633211-47999999998029990789999999999999974124455531135606689984356654343--6--99
Q 003674 653 LGVQRKV-SSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT--V--QV 727 (804)
Q Consensus 653 ldvT~~~-~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~LaAv~l~~~~~~l~p~--f--~~ 727 (804)
||+|+++ .++++++++|.+.+ ++.++|+.+++++|++++.....+ .+..+||++|+++ +++|+ + +.
T Consensus 186 ldvt~~~~~~t~~~~~~l~~~~-~~~~~~~~~~~~~y~~~~~~~~g~--~g~~~hD~lava~------~l~P~l~~~~~~ 256 (306)
T 3t8i_A 186 WEVAEISGSLNERDWEYISKLN-TKLSNFFINVNKTLKEYTTKNQGI--SGSIHPDSLTVSI------AHDNSIILDSSL 256 (306)
T ss_dssp HHHHHHHSEEEHHHHHHHHHHC-CHHHHHHHHHTHHHHHHHHHHHSS--SEEECHHHHHHHH------HHCGGGEEEEEE
T ss_pred CHHCCCCCCCCHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCHHHHHH------HCCCCCEEEEEE
T ss_conf 1001010358999999998619-969999999999999988863488--8876778778142------006440458999
Q ss_pred EEEEEEECCCCCCCCEEEEECCC----CCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 99999972685455419995499----964699982299999999999983
Q 003674 728 KSIKVIAEGNEYKDGQTVIDKNQ----GIFVRVIENLDPEAYYDLFANELN 774 (804)
Q Consensus 728 ~~v~Ve~~~~~~~~G~tv~d~~~----~~~v~v~~~VD~~~f~~~l~~~L~ 774 (804)
.+++||+++ . ++|+|++|+.+ .+|++|+.+||.++|+++|.++|.
T Consensus 257 ~~v~Ve~~g-~-t~G~tv~D~~~~~~~~~n~~V~~~vD~~~f~~~~~~~l~ 305 (306)
T 3t8i_A 257 KYVDVELCS-K-SRGAMLIDWYSLHKNKPNAEIVLKADGGKFKNLLFNSLS 305 (306)
T ss_dssp ECEEECCSG-G-GTTCEEECTTCCSSCCCCEEEEEEECHHHHHHHHHHHHH
T ss_pred EEEEEEECC-C-CCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH
T ss_conf 999999779-8-870688655556799997199760479999999999961
No 7
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} SCOP: c.70.1.1 PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A*
Probab=1.00 E-value=1 Score=442.92 Aligned_cols=316 Identities=20% Similarity=0.271 Sum_probs=237.5
Q ss_pred CCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC-EEEEEEE-EECCCCCHHHHHHHHHHHHHHCCCCC----CEEEECCCC
Q ss_conf 77899809996699920999999998099994-0399999-82899811788999999999709999----727506776
Q 003674 411 TRKLGKPVVFDMDMSVGDFLALFYLLKAPVEV-INLKAIL-VSPTGWANAATIDVIYDLLHMMGRDD----VQVGLGDLF 484 (804)
Q Consensus 411 ~~~~~kkVIiDtD~g~DDalAL~~lL~~p~~~-idLlgIt-v~Gn~~~~~a~~~~a~~lL~~~Gr~d----IPV~~Ga~~ 484 (804)
+.+..+|||||||+|+||++||+|||.+| + ++|+||| |+||.+.+++ .+|++++|+++||.+ ||||+|+.+
T Consensus 9 ~~~~~~~vilD~DpGiDDa~AL~~al~~p--~~iel~gITtv~GN~~~~~~-~~Nal~lL~~~g~~d~~~~IPV~~Ga~~ 85 (338)
T 3epw_A 9 HHGSAKNVVLDHDGNLDDFVAMVLLASNT--EKVRLIGALCTDADCFVENG-FNVTGKIMCLMHNNMNLPLFPIGKSAAT 85 (338)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHCT--TTEEEEEEEECSSSSCHHHH-HHHHHHHHHHHHHHHCCCCCCEEECCCC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCC--CCEEEEEEEEECCCCHHHHH-HHHHHHHHHHHCCCCCCCCCCEEECCCC
T ss_conf 46765369998999869999999997499--97499999996899719999-9999999998099877776556837998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHH
Q ss_conf 6689999999988765334546689999996433576557999986667545334589999999877811399999-998
Q 003674 485 ATNQSDPIDPSVGDCKYVKSIPHGCGGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEIW-DST 563 (804)
Q Consensus 485 pl~~~~~~~p~~~~~~~~~~~~hG~~Gl~d~~~l~gl~~~lp~~~~~~~~e~av~~g~~~~t~~~~~~~p~A~e~~-~~i 563 (804)
|+... +. .+ ..||. |+++. ..++.+. +.-.|+.+. . ......|++++ +.+
T Consensus 86 pl~~~----~~----~~---~~~~~-~~~~~-------~~~~~~g------~~~l~~~~~---~-~~~~~~A~~~i~~~~ 136 (338)
T 3epw_A 86 AVNPF----PK----EW---RCLAK-NMDDM-------PILNIPE------NVELWDKIK---A-ENEKYEGQQLLADLV 136 (338)
T ss_dssp CSSCC----CH----HH---HTHHH-HHHTC-------GGGCCHH------HHHHHHHHH---H-HHHTSBHHHHHHHHH
T ss_pred CCCCC----CC----CC---EECCC-CCCCC-------CCCCCCC------CCCCCCCCC---C-CCCCCCHHHHHHHHH
T ss_conf 87788----87----42---11467-67887-------6678645------345678877---7-667845999999999
Q ss_pred HHHCCCCCCEEEEECCCHHHHHHHHHHC-CCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 7330899958999805723599999519-514520246799347778898889961025899645457779999999986
Q 003674 564 TSTLEPGSKITLLTNGPLTNLAKILSSK-KNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVF 642 (804)
Q Consensus 564 ~~~~~~~~~ItIlaiGPLTNLA~al~~~-Pel~s~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~iVl 642 (804)
+ +++++||||++|||||||.|++++ |++.++|++||+|||++.. .||+++++.++.+|||+++||+||++||
T Consensus 137 ~---~~~~~vtiva~GpLTNlA~al~~~gP~~~~~i~~iviMGG~~~~----~GN~t~~~~~~~aEfN~~~DPeAA~~V~ 209 (338)
T 3epw_A 137 M---NSEEKVTICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAVDV----RGNVFLPSTDGTAEWNIYWDPASAKTVF 209 (338)
T ss_dssp H---HCSSCEEEEECSCTHHHHHHHHHHTHHHHTTEEEEEEECCCSSS----CCSCCCTTSCSCCCHHHHHSHHHHHHHH
T ss_pred H---HCCCCEEEEECCCCHHHHHHHHHCCHHHHHHCCEEEEECCCCCC----CCCCCCCCCCCCCHHCCCCCHHHHHHHH
T ss_conf 8---58996699977873099999987597789757989993687788----8876666789852110463999999998
Q ss_pred H-CCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCC
Q ss_conf 1-899479954663321147999999998029990789999999999999974124455531135606689984356654
Q 003674 643 E-SPLNITLIPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRLSHLQQTHYRYHHMEIFLGEILGAVALAGDNSLL 721 (804)
Q Consensus 643 ~-s~~~itlvpldvT~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~~~~~~~~~~~~~~d~~l~D~LaAv~l~~~~~~l 721 (804)
+ |+++++|+|||+|+++.++++++++|.+.++++.++|+.+++..+..+.... ...++++||++|++++ +
T Consensus 210 ~~sg~~i~~vpLdvT~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~lhDplAva~~------l 280 (338)
T 3epw_A 210 GCPGLRRIMFSLDSTNTVPVRSPYVQRFGEQTNFLLSILVGTMWAMCTHCELLR---DGDGYYAWDALTAAYV------V 280 (338)
T ss_dssp TCTTCCEEEECHHHHTTCBCCHHHHHGGGGGTTSHHHHHHHHHHHTTTTHHHHS---TTCCCBCHHHHHHHHH------H
T ss_pred HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHHHHHH------C
T ss_conf 644999899681214574689999999985189779999999999999987622---5788867659999998------1
Q ss_pred CCC-E--EEEEEEEEECCCCCCCCEEEEECCC-CCCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 343-6--9999999972685455419995499-9646999822999999999999832
Q 003674 722 KPT-V--QVKSIKVIAEGNEYKDGQTVIDKNQ-GIFVRVIENLDPEAYYDLFANELNS 775 (804)
Q Consensus 722 ~p~-f--~~~~v~Ve~~~~~~~~G~tv~d~~~-~~~v~v~~~VD~~~f~~~l~~~L~~ 775 (804)
+|+ | +..+++|++++ +.++|+|++|+.+ ..|++|+++||.++|+++|.++|..
T Consensus 281 ~P~l~~~~~~~v~Ve~~~-g~t~G~Tv~d~~~~~~n~~V~~~vD~~~F~~~~~~~l~~ 337 (338)
T 3epw_A 281 DQKVANVDPVPIDVVVDK-QPNEGATVRTDAENYPLTFVARNPEAEFFLDMLLRSARA 337 (338)
T ss_dssp CGGGCEEEEEEEEECCSS-STTTTCEEECCCTTCCEEEEEESCCHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEEEEEEECC-CCCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHH
T ss_conf 845237899879999389-887866998168998763995416799999999999850
No 8
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis}
Probab=1.00 E-value=1 Score=440.93 Aligned_cols=300 Identities=22% Similarity=0.285 Sum_probs=232.2
Q ss_pred CCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEE-EECCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 98099966999209999999980999940399999-82899811788999999999709999727506776668999999
Q 003674 415 GKPVVFDMDMSVGDFLALFYLLKAPVEVINLKAIL-VSPTGWANAATIDVIYDLLHMMGRDDVQVGLGDLFATNQSDPID 493 (804)
Q Consensus 415 ~kkVIiDtD~g~DDalAL~~lL~~p~~~idLlgIt-v~Gn~~~~~a~~~~a~~lL~~~Gr~dIPV~~Ga~~pl~~~~~~~ 493 (804)
++|||||||+|+||++||+|+|.+| +++|+||| |+||.+.+++ .+|++++|+++||.+||||+|+.+|+....
T Consensus 1 m~kvIiDtD~GiDDa~Al~~al~~p--~i~l~gIt~v~GN~~~~~~-~~na~~ll~~~g~~dIPV~~Ga~~pl~~~~--- 74 (312)
T 2c40_A 1 MKKVYFNHDGGVDDLVSLFLLLQMD--NVELTGVSVIPADCYLEPA-MSASRKIIDRFGKNTIEVAASNSRGKNPFP--- 74 (312)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTCT--TEEEEEEEECSSSSCHHHH-HHHHHHHHHHHCCSCCCEEECCCCCSSCCC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CCEEEEEEEECCCCCHHHH-HHHHHHHHHHCCCCCCCEECCCCCCCCCCC---
T ss_conf 9779997899858999999998689--9889999996288748999-999999999809999888649876566887---
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHCCCC
Q ss_conf 9988765334546689--99999643357655799998666754533458999999987781139999-99987330899
Q 003674 494 PSVGDCKYVKSIPHGC--GGFLDSDTLYGLARDMPRSPRRYTAENSVKYGAPRDTDHPELRQPLALEI-WDSTTSTLEPG 570 (804)
Q Consensus 494 p~~~~~~~~~~~~hG~--~Gl~d~~~l~gl~~~lp~~~~~~~~e~av~~g~~~~t~~~~~~~p~A~e~-~~~i~~~~~~~ 570 (804)
. ....||. +|++.. ..|.... .+. ....|+++ ++.++ +++
T Consensus 75 ------~--~~~~~~~~~~g~~~~--------~~~~~~~-----------------~~~-~~~~A~~~i~~~~~---~~~ 117 (312)
T 2c40_A 75 ------K--DWRMHAFYVDALPIL--------NESGKVV-----------------THV-AAKPAHHHLIETLL---QTE 117 (312)
T ss_dssp ------H--HHHTHHHHHHTCHHH--------HTTSCCC-----------------SCB-CSSCHHHHHHHHHH---HSS
T ss_pred ------C--CCCCCCCCCCCCCCC--------CCCCCCC-----------------CCC-CCCCHHHHHHHHHH---HCC
T ss_conf ------5--211245467876557--------9887666-----------------777-88669999999998---689
Q ss_pred CCEEEEECCCHHHHHHHHHHCCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 95899980572359999951951452024679934777889888996102589964545777999999998618994799
Q 003674 571 SKITLLTNGPLTNLAKILSSKKNATSLIQEVYIVGGHLSHGDRDTGNVFTVPLNKYAEFNMFLDPLAAKTVFESPLNITL 650 (804)
Q Consensus 571 ~~ItIlaiGPLTNLA~al~~~Pel~s~Ik~IviMGG~~~~~~~~~GNv~~~p~n~~aEfN~~~DPeAA~iVl~s~~~itl 650 (804)
++|||+++|||||||.|++++|++.++|++||+|||++.. .||+++++.++.||||+++||+||++||+|+++++|
T Consensus 118 ~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGGa~~~----~GN~t~p~~~p~aEfN~~~DPeAA~~V~~s~~~i~~ 193 (312)
T 2c40_A 118 EKTTLLFTGPLTDLARALYEAPIIENKIKRLVWMGGTFRT----AGNVHEPEHDGTAEWNSFWDPEAVARVWEANIEIDL 193 (312)
T ss_dssp SCEEEEESSCSHHHHHHHHHCGGGGGGEEEEEEECCCCSS----CCSCCCTTCCSCCCHHHHHCHHHHHHHHHSSCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHCHHHHHHCCEEEEECCCCCC----CCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCEEE
T ss_conf 9779998574789999999795078666889994784368----987467889975056501399999999808998799
Q ss_pred ECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH---HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCC-E-
Q ss_conf 54663321147999999998029990789999999999---999974124455531135606689984356654343-6-
Q 003674 651 IPLGVQRKVSSFPKILRRLCLKNKTPEAQFAQHLLSRL---SHLQQTHYRYHHMEIFLGEILGAVALAGDNSLLKPT-V- 725 (804)
Q Consensus 651 vpldvT~~~~~t~~~l~~L~~~~~tp~a~~l~~ll~~~---~~~~~~~~~~~~~d~~l~D~LaAv~l~~~~~~l~p~-f- 725 (804)
+|||+|+++.++++++++|.+.++++.++|+.+.+..+ ..+. ...++++||++|++++ ++|+ |
T Consensus 194 v~ldvt~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~lhD~lava~~------~~p~l~~ 261 (312)
T 2c40_A 194 ITLESTNQVPLTIDIREQWAKERKYIGIDFLGQCYAIVPPLVHFA------KNSTYYLWDVLTAAFV------GKADLAK 261 (312)
T ss_dssp ECGGGGTTCBCCHHHHHHHHHTTTSHHHHHHHHHHHTSCCC--------------CBCHHHHHHHHH------HCGGGSE
T ss_pred ECCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC------CCCCCCCCCHHHHHHH------CCCCCEE
T ss_conf 756532244169999999985178769999999998621333211------4688756689999998------4811225
Q ss_pred -EEEEEEEEECCCCCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf -999999997268545541999549996469998229999999999998321
Q 003674 726 -QVKSIKVIAEGNEYKDGQTVIDKNQGIFVRVIENLDPEAYYDLFANELNSK 776 (804)
Q Consensus 726 -~~~~v~Ve~~~~~~~~G~tv~d~~~~~~v~v~~~VD~~~f~~~l~~~L~~~ 776 (804)
+..+++|+++ +.++|+++.|+. +++++|+.+||.++|+++|.++|...
T Consensus 262 ~~~~~v~V~~~--g~~~G~tv~d~~-~~~~~v~~~vD~~~f~~~~~~~l~~~ 310 (312)
T 2c40_A 262 VQTINSIVHTY--GPSQGRTVETDD-GRPVHVVYDVNHDRFFDYITRLAKKV 310 (312)
T ss_dssp EEEEEEEECCS--STTTTCEEEEEE-EEEEEEEECCCHHHHHHHHHHHHC-C
T ss_pred EEEEEEEEEEC--CCCCCEEEEECC-CCCEEEEEECCHHHHHHHHHHHHHHC
T ss_conf 67877999968--987845987069-99639975068999999999999606
No 9
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A*
Probab=1.00 E-value=1 Score=366.75 Aligned_cols=218 Identities=24% Similarity=0.332 Sum_probs=192.5
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999881514799877776543211377664224675445643444334567888776789999999999999888998
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~~~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||+|++.||...... ..++||.+|+++..+|++...
T Consensus 66 ~~g~~dIPV~~Ga~~Pl~~~~~~---------------------------------a~~~HG~~Glg~~~~p~~~~~--- 109 (322)
T 1yoe_A 66 LLNRTDIPVAGGAVKPLMRELII---------------------------------ADNVHGESGLDGPALPEPTFA--- 109 (322)
T ss_dssp HTTCTTSCEEECCSSCSSSCCCC---------------------------------C-----CCSSCSSCCCCCSSC---
T ss_pred HCCCCCCCEEECCCCCCCCCCCC---------------------------------CCCCCCCCCCCCCCCCCCCCC---
T ss_conf 82999987786888545688766---------------------------------434589888888688987677---
Q ss_pred CCCCCHHHHHHHHHC--CCCEEEEECCCHHHHHHHHHHCCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 876409999999770--799399980624589999956997030369199976998889999988999999989987799
Q 003674 81 LEQLTAQQVLTDKIS--EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCGD 158 (804)
Q Consensus 81 ~~~~~A~~~li~~~~--~g~itiiaiGPLTNlA~al~~dP~~~~~ik~IviMGG~~~~~~~~~~~p~n~~~~~~~~q~~~ 158 (804)
.+..+|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++..
T Consensus 110 ~~~~~Av~~i~~~l~~~p~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGGa~~~---------------------- 167 (322)
T 1yoe_A 110 PQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGL---------------------- 167 (322)
T ss_dssp CCSSCHHHHHHHHHHHCSSCEEEEECSCSHHHHHHHHHCGGGGGGEEEEEEECCCSSC----------------------
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCHHHHHHCCEEEEECCCCCC----------------------
T ss_conf 7863399999999985899879998054889999999796779658989991799878----------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99854568999866666546999999998279988998577654200299999999982698367999999788897431
Q 003674 159 PGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTWL 238 (804)
Q Consensus 159 ~GN~~~~~~~~p~aEfN~~~DPeAA~~Vl~sg~pitlvpld~t~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~~ 238 (804)
||+ +|.|||||++|||||++||+|++|++|+|||+|+++.+++++++++.+. +++.++|+.+++++|.+++.
T Consensus 168 -GN~------tp~AEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 239 (322)
T 1yoe_A 168 -GNW------TPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAI-GNPVSTIVAELLDFFLEYHK 239 (322)
T ss_dssp -CSS------SSSCCHHHHHCHHHHHHHHTSSSCEEEECHHHHTTSEECHHHHHHHHHH-CSHHHHHHHHHHHHHHC---
T ss_pred -CCC------CCCCHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHH
T ss_conf -888------8641765243999999998279988997744233644799999999865-99199999999999999876
Q ss_pred C-CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC-CCCCCCC
Q ss_conf 0-2589998565500142550011235878999861365888899991696-4222489
Q 003674 239 N-DQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNK-PYGISDG 295 (804)
Q Consensus 239 ~-~~~~~~~~~~D~la~a~a~~p~~~~~~~~~~~~~~~~~~~~i~V~~~g~-~~G~~~g 295 (804)
. .++..++++||++|++++++| ++++.+.++++|+++|. +||++..
T Consensus 240 ~~~~~~~g~~lhD~lava~~~~P-----------~~~~~~~~~v~Ve~~g~~t~G~tv~ 287 (322)
T 1yoe_A 240 DEKWGFVGAPLHDPCTIAWLLKP-----------ELFTSVERWVGVETQGKYTQGMTVV 287 (322)
T ss_dssp --CCCCSSEECCTHHHHHHHHCG-----------GGEEEEEECEEECCSCSSCTTCEEE
T ss_pred HCCCCCCCCCCCCHHHHHHEECC-----------CCEEEEEEEEEEEECCCCCCCEEEE
T ss_conf 40058788755637885531561-----------1258899879999589877854998
No 10
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A
Probab=1.00 E-value=1 Score=366.54 Aligned_cols=218 Identities=19% Similarity=0.313 Sum_probs=192.6
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999881514799877776543211377664224675445643444334567888776789999999999999888998
Q 003674 1 MMDRDDISVGVGGEGGILEDGTILADVGGYLPIIEQGTTTTGYCRYRQAIPVGHAGRLEKDTNLGIRKEFLPQGSRRYSP 80 (804)
Q Consensus 1 ~~gr~dIPV~~Ga~~pl~~~~~~~~~~~g~~~~~~~~~~~~~~cry~~~ip~g~g~~~~~hg~dGlg~~~lp~~~~~~~~ 80 (804)
++||.|||||+|++.||..+...+ .++||.+|+|+..+|++.+. +
T Consensus 54 ~~g~~dIPV~~Ga~~pl~~~~~~a---------------------------------~~~hG~~Glg~~~~p~~~~~--~ 98 (314)
T 2mas_A 54 IAGITGVPIAAGCDKPLVRKIMTA---------------------------------GHIHGESGMGTVAYPAEFKN--K 98 (314)
T ss_dssp HTTCCSCCEEECCSSCSSSCCCCC---------------------------------HHHHCSSSSTTCCCCSSCSS--C
T ss_pred HHCCCCCCEEECCCCCCCCCCCCC---------------------------------CCCCCCCCCCCCCCCCCCCC--C
T ss_conf 828899888859875457998785---------------------------------44688778898789986534--5
Q ss_pred CCCCCHHHHHHHHHC---CCCEEEEECCCHHHHHHHHHHCCCCHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 876409999999770---79939998062458999995699703036919997699888999998899999998998779
Q 003674 81 LEQLTAQQVLTDKIS---EGPITVILIGAHTNMGIFLMKNPHLKKNIEHIYAMGGGVRSKNPTGCCPKNSSSSCRPQQCG 157 (804)
Q Consensus 81 ~~~~~A~~~li~~~~---~g~itiiaiGPLTNlA~al~~dP~~~~~ik~IviMGG~~~~~~~~~~~p~n~~~~~~~~q~~ 157 (804)
.++++|+++|+++++ +++||||++|||||||+|++++|+++++||+||||||++. .
T Consensus 99 ~~~~~A~~~i~~~~~~~~~~~vtiva~GPLTNlA~al~~~P~i~~~i~~iviMGG~~~-~-------------------- 157 (314)
T 2mas_A 99 VDERHAVNLIIDLVMSHEPKTITLVPTGGLTNIAMAARLEPRIVDRVKEVVLMGGGYH-E-------------------- 157 (314)
T ss_dssp BCSSCHHHHHHHHHHHSCTTCEEEEECSCSHHHHHHHHHCTHHHHHSCEEEEECCCSS-C--------------------
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCHHHHHHCCEEEEECCCCC-C--------------------
T ss_conf 6776399999999984489987999915588999999879668964778999689666-8--------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99985456899986666654699999999827998899857765420029999999998269836799999978889743
Q 003674 158 DPGNLFTDYTTNPYAEFNMFGDPFAAYQVFHSGIPITLIPLDATNTILVTKNFYKMFEESQNTYEAQYCFKSLKMARDTW 237 (804)
Q Consensus 158 ~~GN~~~~~~~~p~aEfN~~~DPeAA~~Vl~sg~pitlvpld~t~~~~it~~~~~~l~~~~~t~~a~~~~~~l~~~~~~~ 237 (804)
||+ +|.|||||++|||||++||+|++|++|+|||+|+++.+++++++++... +++.++|+.+++++|.+++
T Consensus 158 --GN~------tp~aEfN~~~DPeAA~~V~~s~~~i~~v~ldvt~~~~~t~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 228 (314)
T 2mas_A 158 --GNA------TSVAEFNIIIDPEAAHIVFNESWQVTMVGLDLTHQALATPPILQRVKEV-DTNPARFMLEIMDYYTKIY 228 (314)
T ss_dssp --CSS------SSSCCHHHHTCHHHHHHHHHSSSCEEEECHHHHTTCEECHHHHHHHHTT-CSHHHHHHHHHHHHHHHHH
T ss_pred --CCC------CCHHHHHHHCCHHHHHHHHHCCCCEEEECHHHHCCCCCCHHHHHHHHHC-CCHHHHHHHHHHHHHHHHH
T ss_conf --999------9514887202999999998279987996743434606699999999850-9949999999999999998
Q ss_pred HCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC-CCCCCC
Q ss_conf 102589998565500142550011235878999861365888899991696-422248
Q 003674 238 LNDQFYASYFMWDSFTSGVAMSIMQHSHNHNGENEFAEMEYMNITVVTSNK-PYGISD 294 (804)
Q Consensus 238 ~~~~~~~~~~~~D~la~a~a~~p~~~~~~~~~~~~~~~~~~~~i~V~~~g~-~~G~~~ 294 (804)
...++..++++||++|++++++| ++++.+.++++|+++|. +||++.
T Consensus 229 ~~~~g~~~~~lhD~lava~~~~p-----------~~~~~~~~~v~Ve~~g~~t~G~tv 275 (314)
T 2mas_A 229 QSNRYMAAAAVHDPCAVAYVIDP-----------SVMTTERVPVDIELTGKLTLGMTV 275 (314)
T ss_dssp HSTTCCSSEECCHHHHHHHHHCG-----------GGEEEEECCEEECSSCSSCTTCEE
T ss_pred HHCCCCCCCCCCCHHHHHHHCCH-----------HHEEEEEEEEEEEECCCCCCCEEE
T ss_conf 86258787757739999998581-----------215899975999969987784499
Done!