Query 003682
Match_columns 803
No_of_seqs 597 out of 3802
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 04:02:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003682.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003682hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 7E-167 2E-171 1472.5 85.1 786 1-786 62-850 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 8E-151 2E-155 1324.2 80.1 744 1-786 96-932 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 3E-143 6E-148 1274.5 81.2 743 1-786 13-789 (797)
4 PRK14501 putative bifunctional 100.0 2E-137 4E-142 1230.8 82.4 718 1-782 3-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 2E-116 4E-121 1009.2 60.4 725 1-778 5-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 1E-117 3E-122 977.4 47.3 453 1-490 4-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 2E-116 5E-121 980.1 47.4 463 4-487 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 4E-116 9E-121 981.2 31.1 466 1-487 3-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 7E-111 2E-115 917.1 41.3 459 1-487 17-479 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 9E-106 2E-110 902.7 46.9 453 1-486 2-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 1.8E-96 4E-101 834.8 50.6 458 1-485 2-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 2.5E-36 5.4E-41 356.7 41.4 564 115-736 275-994 (1050)
13 PRK10187 trehalose-6-phosphate 100.0 1.1E-30 2.4E-35 275.0 27.5 234 532-786 14-249 (266)
14 COG1877 OtsB Trehalose-6-phosp 100.0 5E-31 1.1E-35 270.8 22.8 248 520-785 6-256 (266)
15 TIGR00685 T6PP trehalose-phosp 100.0 3.3E-30 7.1E-35 269.0 26.8 237 530-781 1-243 (244)
16 PLN03017 trehalose-phosphatase 100.0 1.5E-29 3.3E-34 270.0 28.0 243 528-786 107-364 (366)
17 PF02358 Trehalose_PPase: Treh 100.0 8.5E-31 1.8E-35 272.1 17.0 227 536-771 1-235 (235)
18 PLN02580 trehalose-phosphatase 100.0 3.6E-29 7.8E-34 269.7 27.8 243 525-786 112-382 (384)
19 PLN02151 trehalose-phosphatase 100.0 8.2E-29 1.8E-33 263.7 27.9 243 528-786 94-350 (354)
20 COG0561 Cof Predicted hydrolas 100.0 2.9E-27 6.3E-32 250.5 21.8 230 530-782 1-262 (264)
21 PRK10513 sugar phosphate phosp 100.0 2.8E-27 6.1E-32 251.5 21.6 229 530-781 1-268 (270)
22 PRK15126 thiamin pyrimidine py 100.0 2.3E-27 4.9E-32 252.4 20.8 229 531-782 1-263 (272)
23 PRK10976 putative hydrolase; P 100.0 3.5E-27 7.5E-32 250.2 20.0 228 531-781 1-264 (266)
24 PRK03669 mannosyl-3-phosphogly 99.9 1.6E-25 3.5E-30 237.7 22.1 236 531-783 6-270 (271)
25 PLN02887 hydrolase family prot 99.9 1.3E-25 2.8E-30 256.6 22.3 230 529-781 305-579 (580)
26 PRK01158 phosphoglycolate phos 99.9 1.7E-25 3.7E-30 232.0 21.1 223 530-781 1-229 (230)
27 cd03792 GT1_Trehalose_phosphor 99.9 4.5E-25 9.7E-30 245.8 21.1 301 115-487 63-371 (372)
28 PRK10530 pyridoxal phosphate ( 99.9 3.2E-24 6.9E-29 228.3 22.6 226 530-781 1-271 (272)
29 PLN02939 transferase, transfer 99.9 9.5E-24 2.1E-28 246.6 28.0 319 118-489 590-968 (977)
30 PF08282 Hydrolase_3: haloacid 99.9 6.8E-24 1.5E-28 222.3 23.4 216 535-777 1-254 (254)
31 PLN02316 synthase/transferase 99.9 1.3E-23 2.7E-28 250.2 27.2 308 117-488 688-1034(1036)
32 PRK15484 lipopolysaccharide 1, 99.9 2.1E-23 4.5E-28 232.7 26.7 269 140-487 100-377 (380)
33 TIGR01484 HAD-SF-IIB HAD-super 99.9 3.3E-24 7.2E-29 218.0 18.2 196 534-741 1-203 (204)
34 TIGR02472 sucr_P_syn_N sucrose 99.9 1E-23 2.2E-28 239.8 23.4 315 117-485 93-438 (439)
35 PRK00654 glgA glycogen synthas 99.9 2.1E-23 4.6E-28 238.7 24.0 297 137-488 118-463 (466)
36 TIGR00099 Cof-subfamily Cof su 99.9 1.2E-23 2.6E-28 221.8 18.0 220 534-776 1-255 (256)
37 PRK14098 glycogen synthase; Pr 99.9 4E-23 8.6E-28 236.4 22.3 319 116-488 119-486 (489)
38 TIGR01482 SPP-subfamily Sucros 99.9 1.4E-23 3.1E-28 216.8 16.9 214 535-780 1-224 (225)
39 TIGR01487 SPP-like sucrose-pho 99.9 3.9E-23 8.4E-28 211.9 18.8 211 532-777 1-215 (215)
40 PRK14099 glycogen synthase; Pr 99.9 9.7E-23 2.1E-27 233.0 23.2 297 136-489 132-480 (485)
41 PRK15427 colanic acid biosynth 99.9 8.7E-23 1.9E-27 229.3 22.2 271 141-486 120-404 (406)
42 TIGR03449 mycothiol_MshA UDP-N 99.9 4.5E-22 9.8E-27 224.2 28.0 286 141-488 103-402 (405)
43 TIGR02095 glgA glycogen/starch 99.9 1.3E-22 2.8E-27 233.2 23.7 311 121-486 111-471 (473)
44 cd03818 GT1_ExpC_like This fam 99.9 1E-22 2.2E-27 228.8 21.8 302 118-482 68-395 (396)
45 PRK00192 mannosyl-3-phosphogly 99.9 1.2E-22 2.6E-27 216.0 20.8 235 530-782 2-271 (273)
46 cd03796 GT1_PIG-A_like This fa 99.9 2.2E-22 4.8E-27 226.2 23.5 281 133-489 84-369 (398)
47 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 1.6E-22 3.5E-27 213.0 20.1 227 534-780 1-255 (256)
48 TIGR01485 SPP_plant-cyano sucr 99.9 1.8E-22 3.8E-27 211.8 19.6 231 533-780 2-246 (249)
49 PTZ00174 phosphomannomutase; P 99.9 1.1E-21 2.3E-26 205.3 25.0 199 529-738 2-225 (247)
50 PLN02871 UDP-sulfoquinovose:DA 99.9 1.5E-21 3.2E-26 223.8 24.6 282 132-489 139-436 (465)
51 TIGR02470 sucr_synth sucrose s 99.9 4.4E-21 9.6E-26 223.9 28.7 334 115-485 361-745 (784)
52 PLN00142 sucrose synthase 99.9 3.2E-21 6.8E-26 225.0 25.4 330 115-485 384-768 (815)
53 TIGR02463 MPGP_rel mannosyl-3- 99.9 1.2E-21 2.6E-26 201.9 18.3 197 534-740 1-218 (221)
54 TIGR03088 stp2 sugar transfera 99.9 4.2E-21 9.1E-26 213.9 23.8 207 238-487 160-372 (374)
55 cd03791 GT1_Glycogen_synthase_ 99.9 3.3E-21 7.2E-26 221.9 23.6 312 119-485 110-474 (476)
56 cd03800 GT1_Sucrose_synthase T 99.9 9.4E-21 2E-25 212.2 26.0 296 127-482 90-397 (398)
57 TIGR02471 sucr_syn_bact_C sucr 99.9 3.8E-21 8.1E-26 200.1 20.5 218 534-780 1-234 (236)
58 TIGR02149 glgA_Coryne glycogen 99.9 1.3E-20 2.8E-25 210.9 25.8 284 140-487 84-386 (388)
59 cd03806 GT1_ALG11_like This fa 99.9 7E-21 1.5E-25 214.8 22.8 195 239-476 213-415 (419)
60 cd04951 GT1_WbdM_like This fam 99.9 1.1E-20 2.3E-25 208.5 23.0 281 131-485 73-358 (360)
61 PRK15490 Vi polysaccharide bio 99.9 1.1E-20 2.5E-25 211.2 22.6 294 131-487 274-575 (578)
62 cd03813 GT1_like_3 This family 99.9 7.1E-21 1.5E-25 218.5 21.7 275 139-483 173-472 (475)
63 PLN02382 probable sucrose-phos 99.9 7.8E-21 1.7E-25 211.5 18.9 237 529-783 6-262 (413)
64 PLN02423 phosphomannomutase 99.9 4.8E-20 1E-24 192.0 23.3 215 530-781 5-244 (245)
65 cd05844 GT1_like_7 Glycosyltra 99.9 2.8E-20 6.1E-25 206.2 22.9 274 132-482 77-365 (367)
66 PLN02949 transferase, transfer 99.9 6E-20 1.3E-24 208.0 25.7 208 239-489 244-458 (463)
67 cd03812 GT1_CapH_like This fam 99.9 3E-20 6.4E-25 205.1 22.4 265 132-466 75-344 (358)
68 PRK15179 Vi polysaccharide bio 99.9 1.1E-20 2.3E-25 221.2 19.5 282 133-484 396-690 (694)
69 cd04962 GT1_like_5 This family 99.8 1.5E-19 3.2E-24 200.8 26.5 287 125-487 73-370 (371)
70 cd03819 GT1_WavL_like This fam 99.8 5.2E-20 1.1E-24 202.9 21.4 268 133-471 74-348 (355)
71 cd03805 GT1_ALG2_like This fam 99.8 9.2E-20 2E-24 204.2 23.5 203 241-480 182-391 (392)
72 PRK14502 bifunctional mannosyl 99.8 4E-20 8.7E-25 209.8 19.5 203 529-744 413-658 (694)
73 PRK10307 putative glycosyl tra 99.8 2.9E-19 6.3E-24 201.9 25.9 282 141-489 108-409 (412)
74 cd03809 GT1_mtfB_like This fam 99.8 1.4E-19 3E-24 199.4 21.9 275 136-482 84-364 (365)
75 TIGR02918 accessory Sec system 99.8 3.4E-19 7.4E-24 203.8 24.7 278 124-486 199-498 (500)
76 cd04946 GT1_AmsK_like This fam 99.8 6.2E-19 1.3E-23 198.5 24.9 270 138-482 126-406 (407)
77 PRK10125 putative glycosyl tra 99.8 1.3E-20 2.7E-25 211.2 11.1 187 238-486 212-403 (405)
78 cd03821 GT1_Bme6_like This fam 99.8 4.5E-19 9.8E-24 195.0 21.8 273 141-482 89-374 (375)
79 cd03822 GT1_ecORF704_like This 99.8 4.6E-19 9.9E-24 195.3 21.6 283 133-485 72-365 (366)
80 cd03799 GT1_amsK_like This is 99.8 1.1E-18 2.4E-23 192.0 24.0 274 127-479 70-353 (355)
81 cd03801 GT1_YqgM_like This fam 99.8 1.1E-18 2.5E-23 190.6 22.5 286 132-485 80-373 (374)
82 cd03814 GT1_like_2 This family 99.8 1.2E-18 2.7E-23 191.5 22.6 274 134-485 80-363 (364)
83 PHA01633 putative glycosyl tra 99.8 1.6E-19 3.4E-24 194.4 14.9 193 243-482 118-334 (335)
84 cd03817 GT1_UGDG_like This fam 99.8 8.9E-19 1.9E-23 192.8 21.4 270 132-473 79-362 (374)
85 PLN02501 digalactosyldiacylgly 99.8 1.7E-19 3.6E-24 203.5 15.6 266 134-484 431-706 (794)
86 cd04949 GT1_gtfA_like This fam 99.8 5E-19 1.1E-23 197.0 19.5 281 120-479 82-370 (372)
87 cd03807 GT1_WbnK_like This fam 99.8 1.5E-18 3.3E-23 190.1 22.8 280 134-484 77-363 (365)
88 TIGR02461 osmo_MPG_phos mannos 99.8 6.6E-19 1.4E-23 181.1 18.5 190 534-739 1-221 (225)
89 PLN02846 digalactosyldiacylgly 99.8 3.2E-19 7E-24 199.2 17.3 267 133-486 112-390 (462)
90 PRK09922 UDP-D-galactose:(gluc 99.8 9.1E-19 2E-23 194.1 20.1 240 131-455 78-326 (359)
91 cd03798 GT1_wlbH_like This fam 99.8 1.8E-18 4E-23 189.6 22.0 283 135-487 91-376 (377)
92 cd03794 GT1_wbuB_like This fam 99.8 3.7E-18 8E-23 188.6 23.2 278 135-481 97-393 (394)
93 cd03793 GT1_Glycogen_synthase_ 99.8 1.1E-17 2.5E-22 187.3 25.9 316 140-486 149-585 (590)
94 cd03820 GT1_amsD_like This fam 99.8 2.7E-18 5.7E-23 186.6 19.8 264 134-482 80-347 (348)
95 PRK12702 mannosyl-3-phosphogly 99.8 4.8E-18 1E-22 175.1 19.0 189 532-739 1-248 (302)
96 cd03823 GT1_ExpE7_like This fa 99.8 1E-17 2.3E-22 183.6 22.7 263 130-483 89-355 (359)
97 cd03816 GT1_ALG1_like This fam 99.8 1.4E-17 2.9E-22 188.2 22.2 161 274-471 231-401 (415)
98 cd03808 GT1_cap1E_like This fa 99.8 1.3E-17 2.9E-22 181.9 20.3 277 133-482 76-358 (359)
99 PHA01630 putative group 1 glyc 99.8 7.1E-18 1.5E-22 183.5 17.4 186 239-486 119-329 (331)
100 PF05116 S6PP: Sucrose-6F-phos 99.8 3.9E-18 8.6E-23 177.7 14.0 185 532-737 2-201 (247)
101 cd03795 GT1_like_4 This family 99.7 3.6E-17 7.9E-22 180.1 19.9 261 135-470 81-348 (357)
102 TIGR03087 stp1 sugar transfera 99.7 2.6E-16 5.6E-21 177.0 24.9 190 239-485 197-394 (397)
103 cd03802 GT1_AviGT4_like This f 99.7 9E-17 2E-21 175.5 20.7 247 132-483 82-332 (335)
104 cd03811 GT1_WabH_like This fam 99.7 4.8E-17 1E-21 176.9 17.9 247 134-452 78-328 (353)
105 cd04955 GT1_like_6 This family 99.7 2.1E-16 4.5E-21 174.6 21.0 191 241-485 167-362 (363)
106 cd03804 GT1_wbaZ_like This fam 99.7 9.6E-17 2.1E-21 177.2 18.3 170 241-480 177-349 (351)
107 cd03825 GT1_wcfI_like This fam 99.7 1.1E-16 2.3E-21 176.9 18.7 194 238-486 159-363 (365)
108 PLN02275 transferase, transfer 99.7 2.9E-16 6.4E-21 174.7 19.2 240 135-451 98-371 (371)
109 COG0297 GlgA Glycogen synthase 99.7 1.1E-15 2.5E-20 170.9 20.9 316 118-489 108-479 (487)
110 PRK05749 3-deoxy-D-manno-octul 99.7 4E-15 8.7E-20 168.8 23.7 287 128-486 115-418 (425)
111 PF00534 Glycos_transf_1: Glyc 99.6 4.2E-16 9.1E-21 153.7 9.8 143 273-454 13-159 (172)
112 KOG1111 N-acetylglucosaminyltr 99.6 2.2E-15 4.9E-20 155.6 8.8 190 212-453 144-335 (426)
113 COG3769 Predicted hydrolase (H 99.6 3.5E-14 7.5E-19 136.9 13.0 198 530-739 5-231 (274)
114 cd04950 GT1_like_1 Glycosyltra 99.5 2.2E-13 4.7E-18 151.9 20.8 266 137-487 100-371 (373)
115 PLN02605 monogalactosyldiacylg 99.4 8.9E-12 1.9E-16 139.3 23.6 191 239-483 174-377 (382)
116 KOG0853 Glycosyltransferase [C 99.4 2.3E-12 5E-17 142.2 16.2 186 274-486 272-466 (495)
117 cd01635 Glycosyltransferase_GT 99.3 6.8E-11 1.5E-15 120.7 16.5 111 280-429 109-220 (229)
118 COG0438 RfaG Glycosyltransfera 99.2 9.4E-11 2E-15 126.6 15.7 198 239-487 173-376 (381)
119 cd03785 GT1_MurG MurG is an N- 99.2 6.6E-10 1.4E-14 122.6 21.8 248 129-476 81-346 (350)
120 TIGR00236 wecB UDP-N-acetylglu 99.2 1E-09 2.3E-14 121.9 21.4 251 126-454 76-335 (365)
121 PRK00726 murG undecaprenyldiph 99.2 5.3E-10 1.1E-14 123.9 18.6 257 131-485 85-355 (357)
122 PRK13609 diacylglycerol glucos 99.2 2.2E-09 4.8E-14 120.0 23.4 276 121-489 88-373 (380)
123 KOG1387 Glycosyltransferase [C 99.2 5.3E-10 1.2E-14 115.2 14.4 315 115-488 123-459 (465)
124 TIGR01133 murG undecaprenyldip 99.1 9.1E-10 2E-14 121.3 17.2 181 241-479 153-346 (348)
125 PRK13608 diacylglycerol glucos 99.1 7.7E-09 1.7E-13 116.0 22.8 268 128-489 95-373 (391)
126 cd03786 GT1_UDP-GlcNAc_2-Epime 99.1 6E-09 1.3E-13 115.6 21.6 252 124-456 76-340 (363)
127 TIGR01670 YrbI-phosphatas 3-de 99.1 3.3E-10 7.2E-15 109.5 9.2 74 698-784 76-152 (154)
128 PRK09484 3-deoxy-D-manno-octul 99.1 4.3E-10 9.4E-15 112.0 8.6 109 530-739 19-134 (183)
129 PF13692 Glyco_trans_1_4: Glyc 99.0 7E-10 1.5E-14 104.5 6.0 128 275-452 2-134 (135)
130 PRK00025 lpxB lipid-A-disaccha 98.9 3.7E-08 8.1E-13 110.1 18.8 134 274-455 185-343 (380)
131 TIGR02094 more_P_ylases alpha- 98.9 5E-07 1.1E-11 105.3 27.5 182 273-484 387-597 (601)
132 TIGR02726 phenyl_P_delta pheny 98.9 5.7E-09 1.2E-13 101.8 9.0 142 531-783 6-157 (169)
133 KOG3189 Phosphomannomutase [Li 98.9 3.9E-08 8.4E-13 94.0 14.1 200 526-736 5-229 (252)
134 PF03332 PMM: Eukaryotic phosp 98.9 5.2E-08 1.1E-12 96.6 15.4 192 558-781 2-219 (220)
135 PRK11133 serB phosphoserine ph 98.8 7.2E-08 1.6E-12 104.1 15.4 65 697-778 247-316 (322)
136 TIGR03713 acc_sec_asp1 accesso 98.8 1.7E-07 3.8E-12 107.7 18.9 147 273-455 319-490 (519)
137 cd01427 HAD_like Haloacid deha 98.8 2E-08 4.3E-13 94.0 9.2 55 534-589 1-60 (139)
138 PRK09814 beta-1,6-galactofuran 98.8 1.6E-07 3.5E-12 103.0 16.6 236 132-467 58-311 (333)
139 COG0546 Gph Predicted phosphat 98.7 7.9E-08 1.7E-12 98.8 10.1 79 683-779 135-219 (220)
140 cd04299 GT1_Glycogen_Phosphory 98.7 1.3E-06 2.8E-11 103.8 21.4 183 275-487 478-689 (778)
141 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.6 6.2E-07 1.3E-11 94.4 16.0 65 699-777 181-254 (257)
142 PRK10444 UMP phosphatase; Prov 98.6 1.1E-06 2.4E-11 91.7 16.4 59 532-595 1-59 (248)
143 COG1778 Low specificity phosph 98.6 8.8E-08 1.9E-12 88.7 6.4 72 698-782 83-157 (170)
144 PRK13288 pyrophosphatase PpaX; 98.6 4.2E-08 9.1E-13 100.5 4.5 68 698-779 139-212 (214)
145 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.6 5.7E-07 1.2E-11 94.2 12.5 54 532-590 1-57 (249)
146 COG0560 SerB Phosphoserine pho 98.6 4.6E-07 9.9E-12 92.1 11.4 44 693-739 139-182 (212)
147 PRK13226 phosphoglycolate phos 98.6 4.2E-08 9.1E-13 101.6 3.9 66 699-778 153-225 (229)
148 smart00775 LNS2 LNS2 domain. T 98.5 1.7E-07 3.8E-12 90.6 6.9 52 534-589 1-66 (157)
149 PRK13225 phosphoglycolate phos 98.5 4.9E-07 1.1E-11 95.8 10.6 70 698-781 196-271 (273)
150 PF05693 Glycogen_syn: Glycoge 98.5 2.3E-06 5E-11 96.5 15.4 103 364-485 462-579 (633)
151 PRK13223 phosphoglycolate phos 98.5 3.4E-07 7.3E-12 97.3 7.7 70 695-778 155-230 (272)
152 TIGR01452 PGP_euk phosphoglyco 98.4 3.8E-06 8.3E-11 89.7 15.6 59 532-595 2-60 (279)
153 TIGR00338 serB phosphoserine p 98.4 2.5E-06 5.4E-11 87.6 13.3 62 698-776 152-218 (219)
154 PLN02645 phosphoglycolate phos 98.4 5.4E-06 1.2E-10 89.9 16.4 60 531-595 27-86 (311)
155 PRK13222 phosphoglycolate phos 98.4 5.7E-07 1.2E-11 92.8 7.3 67 699-779 151-223 (226)
156 TIGR00215 lpxB lipid-A-disacch 98.4 2E-05 4.4E-10 88.1 19.5 134 274-454 190-348 (385)
157 TIGR01488 HAD-SF-IB Haloacid D 98.3 2.1E-06 4.6E-11 84.8 8.6 41 693-736 137-177 (177)
158 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.3 9.2E-06 2E-10 82.0 13.2 39 698-739 147-185 (201)
159 TIGR01449 PGP_bact 2-phosphogl 98.2 3.7E-07 8.1E-12 93.2 1.8 64 699-776 143-212 (213)
160 PRK13478 phosphonoacetaldehyde 98.2 1.7E-05 3.8E-10 84.1 14.2 71 699-783 160-260 (267)
161 TIGR01689 EcbF-BcbF capsule bi 98.2 2.2E-06 4.7E-11 79.0 5.9 51 533-584 2-55 (126)
162 COG1519 KdtA 3-deoxy-D-manno-o 98.2 0.00058 1.3E-08 74.4 25.1 300 122-472 32-404 (419)
163 PRK08942 D,D-heptose 1,7-bisph 98.2 1.6E-05 3.5E-10 79.1 12.5 66 699-778 105-177 (181)
164 PRK06769 hypothetical protein; 98.2 8.8E-06 1.9E-10 80.3 10.5 65 699-777 95-171 (173)
165 PLN02770 haloacid dehalogenase 98.2 4.1E-06 8.9E-11 87.8 8.0 74 681-772 152-230 (248)
166 PRK11587 putative phosphatase; 98.1 5.6E-06 1.2E-10 85.0 8.3 61 699-773 140-203 (218)
167 PRK09552 mtnX 2-hydroxy-3-keto 98.1 3.6E-05 7.9E-10 79.1 14.2 72 696-782 146-217 (219)
168 PLN02954 phosphoserine phospha 98.1 5.5E-06 1.2E-10 85.4 7.4 66 695-777 152-223 (224)
169 TIGR03351 PhnX-like phosphonat 98.1 1.7E-05 3.6E-10 81.5 10.5 65 699-777 147-219 (220)
170 TIGR01422 phosphonatase phosph 98.1 2.8E-05 6.1E-10 81.8 12.4 65 699-777 158-252 (253)
171 PF13524 Glyco_trans_1_2: Glyc 98.1 3.7E-06 8E-11 73.6 4.7 87 374-482 1-91 (92)
172 TIGR01684 viral_ppase viral ph 98.0 1.1E-05 2.3E-10 84.1 7.7 70 531-604 125-200 (301)
173 PRK10826 2-deoxyglucose-6-phos 98.0 7E-06 1.5E-10 84.5 6.2 62 699-774 150-216 (222)
174 TIGR02253 CTE7 HAD superfamily 98.0 1.2E-05 2.6E-10 82.7 7.5 61 699-773 152-220 (221)
175 PLN02575 haloacid dehalogenase 98.0 2.8E-05 6.1E-10 85.2 10.4 71 699-783 274-348 (381)
176 PLN03243 haloacid dehalogenase 98.0 3.1E-05 6.7E-10 81.6 9.9 64 699-777 167-234 (260)
177 TIGR01681 HAD-SF-IIIC HAD-supe 98.0 4E-05 8.7E-10 71.6 9.4 54 533-587 1-64 (128)
178 PLN02779 haloacid dehalogenase 97.9 1.8E-05 3.9E-10 84.7 7.7 62 699-774 204-269 (286)
179 TIGR02137 HSK-PSP phosphoserin 97.9 0.0001 2.2E-09 74.6 11.7 63 697-780 131-198 (203)
180 TIGR02919 accessory Sec system 97.9 9.4E-05 2E-09 83.4 12.1 122 291-455 291-413 (438)
181 TIGR00213 GmhB_yaeD D,D-heptos 97.8 5.2E-05 1.1E-09 75.0 8.4 63 699-774 108-175 (176)
182 PRK06698 bifunctional 5'-methy 97.8 3.7E-05 7.9E-10 88.1 7.3 66 699-780 387-456 (459)
183 PHA03398 viral phosphatase sup 97.7 6.4E-05 1.4E-09 78.5 7.4 70 531-604 127-202 (303)
184 TIGR01656 Histidinol-ppas hist 97.7 0.00014 2.9E-09 69.8 9.1 37 699-738 103-139 (147)
185 PRK09449 dUMP phosphatase; Pro 97.7 5E-05 1.1E-09 78.2 5.8 66 699-778 152-223 (224)
186 TIGR01668 YqeG_hyp_ppase HAD s 97.7 0.00079 1.7E-08 66.2 13.6 58 515-579 12-69 (170)
187 TIGR01664 DNA-3'-Pase DNA 3'-p 97.6 0.00015 3.3E-09 70.9 7.9 50 529-579 10-68 (166)
188 PRK14988 GMP/IMP nucleotidase; 97.6 0.00026 5.6E-09 73.0 10.0 70 699-781 151-222 (224)
189 PHA02597 30.2 hypothetical pro 97.6 0.00022 4.9E-09 71.8 9.2 60 699-774 132-195 (197)
190 TIGR01261 hisB_Nterm histidino 97.5 0.00024 5.2E-09 69.1 7.7 37 699-738 105-141 (161)
191 PHA02530 pseT polynucleotide k 97.5 0.00095 2.1E-08 72.1 13.3 56 532-588 158-222 (300)
192 TIGR01489 DKMTPPase-SF 2,3-dik 97.5 0.00036 7.8E-09 69.5 9.3 43 693-741 144-186 (188)
193 PLN02940 riboflavin kinase 97.5 0.00017 3.8E-09 80.3 6.8 62 699-774 152-217 (382)
194 COG0647 NagD Predicted sugar p 97.4 0.00052 1.1E-08 71.8 7.9 49 531-584 7-55 (269)
195 TIGR01460 HAD-SF-IIA Haloacid 97.3 0.0056 1.2E-07 63.6 15.2 50 535-589 1-53 (236)
196 TIGR01990 bPGM beta-phosphoglu 97.2 0.0016 3.4E-08 64.7 9.8 37 699-738 143-179 (185)
197 TIGR01685 MDP-1 magnesium-depe 97.1 0.0033 7.1E-08 61.7 10.6 56 532-588 2-81 (174)
198 PRK10725 fructose-1-P/6-phosph 97.1 0.00046 1E-08 68.8 4.6 37 699-738 144-180 (188)
199 PRK11590 hypothetical protein; 97.1 0.00087 1.9E-08 68.4 6.7 38 696-739 161-198 (211)
200 TIGR01686 FkbH FkbH-like domai 97.1 0.004 8.6E-08 67.9 12.0 115 531-738 2-124 (320)
201 TIGR01525 ATPase-IB_hvy heavy 97.1 0.0029 6.3E-08 74.4 11.2 64 526-590 358-422 (556)
202 PRK10563 6-phosphogluconate ph 97.1 0.00028 6.1E-09 72.5 2.5 38 699-739 144-181 (221)
203 TIGR02009 PGMB-YQAB-SF beta-ph 97.0 0.00014 3E-09 72.4 -0.1 37 699-738 144-180 (185)
204 TIGR01662 HAD-SF-IIIA HAD-supe 97.0 0.00085 1.9E-08 62.8 4.8 55 533-588 1-68 (132)
205 TIGR01549 HAD-SF-IA-v1 haloaci 97.0 0.001 2.2E-08 64.1 5.3 35 699-737 120-154 (154)
206 PRK05446 imidazole glycerol-ph 96.9 0.0094 2E-07 65.2 12.4 38 699-739 106-143 (354)
207 TIGR01672 AphA HAD superfamily 96.9 0.0023 4.9E-08 66.2 7.2 69 518-587 49-152 (237)
208 TIGR02252 DREG-2 REG-2-like, H 96.9 0.00092 2E-08 67.6 4.1 37 699-738 162-199 (203)
209 PRK10671 copA copper exporting 96.9 0.006 1.3E-07 75.3 11.9 64 525-589 623-686 (834)
210 TIGR01512 ATPase-IB2_Cd heavy 96.8 0.0056 1.2E-07 71.6 10.7 60 530-590 340-400 (536)
211 PLN02919 haloacid dehalogenase 96.8 0.006 1.3E-07 76.6 11.4 61 699-773 220-285 (1057)
212 TIGR01548 HAD-SF-IA-hyp1 haloa 96.8 0.002 4.3E-08 64.9 5.6 34 699-735 163-196 (197)
213 PRK08238 hypothetical protein; 96.7 0.011 2.3E-07 67.7 11.8 36 553-589 73-108 (479)
214 PF06437 ISN1: IMP-specific 5' 96.7 0.092 2E-06 56.5 17.7 200 519-731 134-388 (408)
215 TIGR02247 HAD-1A3-hyp Epoxide 96.7 0.018 3.8E-07 58.6 12.3 36 700-738 155-190 (211)
216 COG2179 Predicted hydrolase of 96.7 0.0064 1.4E-07 57.8 8.0 66 518-590 18-83 (175)
217 TIGR01511 ATPase-IB1_Cu copper 96.6 0.013 2.8E-07 68.8 11.9 60 529-589 382-441 (562)
218 TIGR01454 AHBA_synth_RP 3-amin 96.6 0.0048 1E-07 62.5 6.7 66 699-778 133-204 (205)
219 PF13344 Hydrolase_6: Haloacid 96.6 0.00083 1.8E-08 59.8 1.0 51 535-590 1-51 (101)
220 PF00702 Hydrolase: haloacid d 96.5 0.0027 5.9E-08 64.4 4.9 37 553-590 128-164 (215)
221 KOG1615 Phosphoserine phosphat 96.5 0.0085 1.8E-07 58.1 7.3 36 698-738 159-194 (227)
222 TIGR01497 kdpB K+-transporting 96.4 0.017 3.8E-07 68.4 11.1 66 524-590 418-483 (675)
223 PTZ00445 p36-lilke protein; Pr 96.4 0.014 3E-07 58.2 8.5 157 520-738 31-199 (219)
224 TIGR01522 ATPase-IIA2_Ca golgi 96.3 0.026 5.7E-07 70.0 12.7 64 525-589 496-564 (884)
225 PRK11033 zntA zinc/cadmium/mer 96.3 0.026 5.7E-07 68.4 12.3 65 525-590 541-605 (741)
226 COG1011 Predicted hydrolase (H 96.3 0.0034 7.4E-08 64.6 3.9 64 700-779 157-228 (229)
227 PF13242 Hydrolase_like: HAD-h 96.2 0.012 2.6E-07 49.2 6.0 59 700-772 7-74 (75)
228 KOG2941 Beta-1,4-mannosyltrans 96.1 0.082 1.8E-06 56.0 12.6 142 274-453 254-405 (444)
229 KOG3120 Predicted haloacid deh 95.9 0.034 7.3E-07 55.2 8.3 95 687-786 152-252 (256)
230 COG0763 LpxB Lipid A disacchar 95.9 0.41 9E-06 52.1 17.2 209 116-397 69-285 (381)
231 COG4087 Soluble P-type ATPase 95.8 0.012 2.5E-07 53.5 4.4 56 714-780 90-149 (152)
232 PF12710 HAD: haloacid dehalog 95.7 0.028 6E-07 56.0 7.4 34 555-589 92-125 (192)
233 PF02684 LpxB: Lipid-A-disacch 95.7 0.74 1.6E-05 51.0 18.9 259 126-456 72-343 (373)
234 PRK11009 aphA acid phosphatase 95.7 0.017 3.7E-07 59.7 5.8 61 518-579 49-140 (237)
235 TIGR01675 plant-AP plant acid 95.6 0.023 4.9E-07 58.1 6.2 51 531-582 76-149 (229)
236 COG0637 Predicted phosphatase/ 95.6 0.012 2.5E-07 60.5 4.1 50 682-738 131-180 (221)
237 TIGR01116 ATPase-IIA1_Ca sarco 95.5 0.063 1.4E-06 66.9 11.1 40 550-590 535-574 (917)
238 KOG0210 P-type ATPase [Inorgan 95.5 0.11 2.3E-06 59.6 11.6 64 696-778 766-833 (1051)
239 TIGR01106 ATPase-IIC_X-K sodiu 95.4 0.066 1.4E-06 67.3 10.6 38 551-589 567-604 (997)
240 PRK01122 potassium-transportin 95.2 0.092 2E-06 62.5 10.5 65 525-590 418-482 (679)
241 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.2 0.026 5.6E-07 58.9 5.3 54 531-589 7-62 (242)
242 TIGR01517 ATPase-IIB_Ca plasma 95.2 0.15 3.2E-06 64.0 12.6 137 551-777 578-721 (941)
243 PF09419 PGP_phosphatase: Mito 95.2 0.028 6E-07 54.6 4.9 48 513-564 24-71 (168)
244 PRK14010 potassium-transportin 95.2 0.099 2.2E-06 62.1 10.5 69 521-590 410-478 (673)
245 PF08323 Glyco_transf_5: Starc 95.0 0.087 1.9E-06 55.0 8.6 91 119-212 114-232 (245)
246 TIGR01657 P-ATPase-V P-type AT 95.0 0.19 4.2E-06 63.6 13.2 46 551-600 655-700 (1054)
247 TIGR01490 HAD-SF-IB-hyp1 HAD-s 95.0 0.018 4E-07 58.0 3.3 42 695-739 152-193 (202)
248 PF08235 LNS2: LNS2 (Lipin/Ned 95.0 0.039 8.5E-07 52.8 5.3 55 534-589 1-66 (157)
249 PRK13582 thrH phosphoserine ph 95.0 0.042 9.2E-07 55.5 5.9 54 715-782 142-200 (205)
250 PF08645 PNK3P: Polynucleotide 95.0 0.015 3.1E-07 56.5 2.4 44 533-577 1-53 (159)
251 TIGR01652 ATPase-Plipid phosph 94.8 0.13 2.9E-06 65.1 10.8 45 551-599 630-674 (1057)
252 PF13439 Glyco_transf_4: Glyco 94.6 0.0073 1.6E-07 58.6 -0.8 98 131-253 74-177 (177)
253 TIGR03492 conserved hypothetic 94.6 0.23 5E-06 55.8 11.1 138 276-454 208-365 (396)
254 PLN03190 aminophospholipid tra 94.6 0.25 5.5E-06 62.7 12.4 38 550-588 724-761 (1178)
255 TIGR01533 lipo_e_P4 5'-nucleot 94.5 0.045 9.7E-07 57.5 4.7 54 530-584 73-149 (266)
256 TIGR01680 Veg_Stor_Prot vegeta 94.2 0.063 1.4E-06 55.9 5.0 55 532-587 101-179 (275)
257 TIGR01647 ATPase-IIIA_H plasma 94.1 0.51 1.1E-05 57.6 13.4 64 526-590 411-479 (755)
258 TIGR03568 NeuC_NnaA UDP-N-acet 94.1 2.1 4.6E-05 47.5 17.3 73 353-452 263-338 (365)
259 PRK10517 magnesium-transportin 94.1 0.42 9.2E-06 59.3 12.8 39 551-590 549-587 (902)
260 TIGR01523 ATPase-IID_K-Na pota 93.9 0.24 5.3E-06 62.4 10.4 38 551-589 645-682 (1053)
261 PF11019 DUF2608: Protein of u 93.9 0.86 1.9E-05 47.7 12.8 59 692-760 156-214 (252)
262 TIGR01524 ATPase-IIIB_Mg magne 93.6 0.64 1.4E-05 57.6 13.1 39 551-590 514-552 (867)
263 TIGR01494 ATPase_P-type ATPase 93.5 0.34 7.4E-06 56.3 10.1 63 527-590 322-384 (499)
264 COG0474 MgtA Cation transport 93.5 0.44 9.5E-06 59.4 11.5 40 550-590 545-584 (917)
265 PRK15122 magnesium-transportin 93.4 0.73 1.6E-05 57.3 13.2 39 551-590 549-587 (903)
266 TIGR03333 salvage_mtnX 2-hydro 93.4 0.045 9.8E-07 55.9 2.2 70 697-781 143-212 (214)
267 COG0381 WecB UDP-N-acetylgluco 93.2 13 0.00028 40.9 20.5 137 275-456 205-344 (383)
268 TIGR01663 PNK-3'Pase polynucle 92.9 0.16 3.6E-06 58.5 6.1 49 531-580 167-224 (526)
269 smart00577 CPDc catalytic doma 92.9 0.2 4.3E-06 47.9 5.8 57 532-590 2-81 (148)
270 PF03767 Acid_phosphat_B: HAD 92.9 0.013 2.9E-07 60.4 -2.5 60 530-590 70-152 (229)
271 KOG0206 P-type ATPase [General 92.9 0.53 1.1E-05 58.6 10.6 45 689-739 772-816 (1151)
272 KOG3109 Haloacid dehalogenase- 92.8 0.17 3.7E-06 50.4 5.1 70 700-785 163-235 (244)
273 PF13844 Glyco_transf_41: Glyc 92.7 0.37 8E-06 54.6 8.3 101 273-394 283-383 (468)
274 KOG3040 Predicted sugar phosph 92.6 1.6 3.5E-05 43.2 11.3 61 530-595 5-65 (262)
275 cd03784 GT1_Gtf_like This fami 92.5 5.6 0.00012 44.6 17.7 73 354-452 290-371 (401)
276 COG0707 MurG UDP-N-acetylgluco 92.4 11 0.00025 41.5 19.4 91 362-476 243-346 (357)
277 PF02350 Epimerase_2: UDP-N-ac 92.4 12 0.00026 41.2 19.6 261 119-453 50-318 (346)
278 TIGR01456 CECR5 HAD-superfamil 92.3 0.23 5E-06 54.1 5.9 49 534-587 2-57 (321)
279 TIGR01545 YfhB_g-proteo haloac 92.2 0.38 8.1E-06 49.0 7.0 23 717-739 175-197 (210)
280 PF07429 Glyco_transf_56: 4-al 92.0 1.4 3.1E-05 47.4 11.2 141 274-450 184-330 (360)
281 PRK13582 thrH phosphoserine ph 91.7 0.19 4.2E-06 50.6 4.3 34 555-590 71-104 (205)
282 TIGR01454 AHBA_synth_RP 3-amin 91.4 0.22 4.8E-06 50.3 4.4 37 553-590 76-112 (205)
283 TIGR03333 salvage_mtnX 2-hydro 90.9 0.54 1.2E-05 47.9 6.7 37 553-590 71-107 (214)
284 TIGR01490 HAD-SF-IB-hyp1 HAD-s 90.8 0.49 1.1E-05 47.6 6.1 36 554-590 89-124 (202)
285 PF12689 Acid_PPase: Acid Phos 90.4 2.5 5.5E-05 41.3 10.4 49 685-738 97-145 (169)
286 PF05152 DUF705: Protein of un 90.1 0.99 2.1E-05 47.1 7.6 58 531-589 121-178 (297)
287 PF06888 Put_Phosphatase: Puta 90.0 0.59 1.3E-05 48.2 5.9 47 692-738 144-190 (234)
288 COG0241 HisB Histidinol phosph 89.6 0.37 8E-06 47.4 3.9 38 699-739 107-144 (181)
289 TIGR02254 YjjG/YfnB HAD superf 89.3 0.68 1.5E-05 47.2 5.9 66 699-777 154-224 (224)
290 PF03031 NIF: NLI interacting 89.1 0.28 6E-06 47.4 2.6 56 533-590 1-72 (159)
291 KOG0208 Cation transport ATPas 88.6 1.2 2.6E-05 53.6 7.7 47 550-600 703-749 (1140)
292 PRK02797 4-alpha-L-fucosyltran 88.2 4.7 0.0001 42.9 11.1 125 274-435 145-272 (322)
293 PRK10748 flavin mononucleotide 88.1 0.91 2E-05 47.1 5.9 37 699-738 165-202 (238)
294 PLN02811 hydrolase 87.7 0.73 1.6E-05 47.1 4.8 60 699-772 139-205 (220)
295 TIGR02251 HIF-SF_euk Dullard-l 87.6 1 2.2E-05 43.7 5.5 57 532-590 1-78 (162)
296 TIGR02245 HAD_IIID1 HAD-superf 87.3 1.1 2.4E-05 44.8 5.6 58 530-589 19-80 (195)
297 COG3882 FkbH Predicted enzyme 87.0 1.8 3.9E-05 48.2 7.4 71 520-591 210-293 (574)
298 COG4359 Uncharacterized conser 86.5 1.1 2.5E-05 43.4 4.9 42 693-741 142-183 (220)
299 PRK10748 flavin mononucleotide 86.3 0.4 8.7E-06 49.8 2.0 31 531-564 9-39 (238)
300 TIGR01426 MGT glycosyltransfer 86.1 3.7 7.9E-05 46.0 9.8 75 354-454 277-360 (392)
301 TIGR01544 HAD-SF-IE haloacid d 85.8 0.69 1.5E-05 48.8 3.4 39 696-737 190-231 (277)
302 COG4030 Uncharacterized protei 85.6 3.1 6.8E-05 41.7 7.5 37 698-738 191-227 (315)
303 PF13419 HAD_2: Haloacid dehal 84.5 1.6 3.5E-05 41.9 5.3 37 699-738 135-171 (176)
304 PF13579 Glyco_trans_4_4: Glyc 84.0 0.79 1.7E-05 43.2 2.8 71 135-212 71-146 (160)
305 TIGR01662 HAD-SF-IIIA HAD-supe 83.6 1.1 2.4E-05 41.5 3.5 37 699-738 87-125 (132)
306 PF06941 NT5C: 5' nucleotidase 83.5 0.85 1.9E-05 45.6 2.8 28 553-581 74-101 (191)
307 TIGR03590 PseG pseudaminic aci 83.1 3.9 8.4E-05 43.6 7.8 92 274-396 170-261 (279)
308 TIGR02254 YjjG/YfnB HAD superf 83.0 0.7 1.5E-05 47.1 2.0 14 532-545 1-14 (224)
309 TIGR01545 YfhB_g-proteo haloac 82.5 1.5 3.2E-05 44.6 4.1 15 531-545 4-18 (210)
310 TIGR02250 FCP1_euk FCP1-like p 82.4 2.7 5.7E-05 40.6 5.6 59 530-590 4-94 (156)
311 TIGR01993 Pyr-5-nucltdase pyri 82.2 1.1 2.4E-05 44.2 3.1 37 699-738 143-179 (184)
312 COG2217 ZntA Cation transport 82.0 3 6.4E-05 50.1 6.9 67 689-778 580-652 (713)
313 COG3700 AphA Acid phosphatase 81.7 3 6.4E-05 40.3 5.4 68 518-585 49-146 (237)
314 KOG2116 Protein involved in pl 80.5 2.2 4.8E-05 49.1 4.9 77 531-608 529-616 (738)
315 TIGR01428 HAD_type_II 2-haloal 80.5 2.2 4.7E-05 42.7 4.5 37 699-738 150-186 (198)
316 PRK09456 ?-D-glucose-1-phospha 79.8 3.4 7.5E-05 41.4 5.7 37 699-738 143-179 (199)
317 PRK09456 ?-D-glucose-1-phospha 79.8 2.3 4.9E-05 42.7 4.4 13 533-545 1-13 (199)
318 TIGR01509 HAD-SF-IA-v3 haloaci 79.0 2.4 5.2E-05 41.5 4.2 37 699-738 142-178 (183)
319 PF06888 Put_Phosphatase: Puta 78.4 4.6 0.0001 41.6 6.1 14 534-547 2-15 (234)
320 TIGR01428 HAD_type_II 2-haloal 78.4 1.7 3.8E-05 43.4 3.1 14 532-545 1-14 (198)
321 TIGR01691 enolase-ppase 2,3-di 76.6 5.9 0.00013 40.6 6.3 38 699-739 154-191 (220)
322 KOG0202 Ca2+ transporting ATPa 76.5 30 0.00064 41.7 12.4 38 552-590 584-621 (972)
323 COG5083 SMP2 Uncharacterized p 75.0 1.7 3.7E-05 47.6 1.9 67 529-602 372-449 (580)
324 TIGR01993 Pyr-5-nucltdase pyri 73.8 3.9 8.4E-05 40.3 4.1 26 534-562 2-27 (184)
325 PF06258 Mito_fiss_Elm1: Mitoc 73.4 11 0.00024 40.8 7.7 99 274-395 146-249 (311)
326 TIGR01493 HAD-SF-IA-v2 Haloaci 71.8 1.4 3.1E-05 43.0 0.4 34 699-735 141-174 (175)
327 COG4087 Soluble P-type ATPase 71.7 3.4 7.5E-05 37.9 2.7 49 534-588 16-64 (152)
328 COG4996 Predicted phosphatase 71.5 10 0.00022 34.8 5.6 57 533-590 1-78 (164)
329 KOG1618 Predicted phosphatase 69.8 3.9 8.4E-05 43.3 3.0 40 533-577 36-79 (389)
330 PRK14089 ipid-A-disaccharide s 68.5 1.9E+02 0.0041 31.8 17.3 28 365-397 229-256 (347)
331 KOG0203 Na+/K+ ATPase, alpha s 68.4 17 0.00036 43.7 8.0 38 556-597 594-631 (1019)
332 COG0816 Predicted endonuclease 68.1 31 0.00067 32.6 8.4 72 293-374 41-112 (141)
333 PRK14986 glycogen phosphorylas 67.0 1.1E+02 0.0024 37.4 14.6 150 274-444 542-701 (815)
334 PRK01021 lpxB lipid-A-disaccha 66.5 2.8E+02 0.006 32.9 18.3 28 365-397 482-509 (608)
335 COG4641 Uncharacterized protei 66.1 14 0.0003 40.4 6.4 114 355-488 241-362 (373)
336 TIGR01672 AphA HAD superfamily 65.1 10 0.00022 39.3 5.1 29 720-759 187-215 (237)
337 TIGR01493 HAD-SF-IA-v2 Haloaci 64.5 6.8 0.00015 38.1 3.5 24 534-564 1-24 (175)
338 KOG0204 Calcium transporting A 63.9 26 0.00056 42.2 8.4 36 552-588 647-682 (1034)
339 KOG2134 Polynucleotide kinase 63.9 5.5 0.00012 43.3 2.8 47 531-578 74-129 (422)
340 COG2179 Predicted hydrolase of 60.7 14 0.00029 35.7 4.5 44 699-758 95-139 (175)
341 COG2503 Predicted secreted aci 60.4 8.5 0.00019 39.3 3.3 58 530-588 77-158 (274)
342 PF12000 Glyco_trans_4_3: Gkyc 60.2 54 0.0012 32.1 8.8 48 118-169 43-94 (171)
343 TIGR01456 CECR5 HAD-superfamil 60.0 16 0.00035 39.7 5.7 51 716-777 262-320 (321)
344 PF00343 Phosphorylase: Carboh 59.5 1.6E+02 0.0035 35.5 14.0 134 273-429 442-582 (713)
345 COG3914 Spy Predicted O-linked 59.4 72 0.0016 37.0 10.6 100 276-394 431-530 (620)
346 KOG2882 p-Nitrophenyl phosphat 59.3 8.4 0.00018 40.7 3.2 60 531-595 21-80 (306)
347 smart00577 CPDc catalytic doma 59.3 5 0.00011 38.2 1.5 33 703-738 104-136 (148)
348 COG0241 HisB Histidinol phosph 58.4 77 0.0017 31.3 9.5 13 595-607 9-21 (181)
349 cd04300 GT1_Glycogen_Phosphory 57.8 2.1E+02 0.0045 35.1 14.7 137 273-429 528-668 (797)
350 COG3660 Predicted nucleoside-d 56.7 87 0.0019 32.7 9.7 52 141-209 72-123 (329)
351 PRK04128 1-(5-phosphoribosyl)- 55.9 36 0.00078 35.1 7.2 61 519-587 31-92 (228)
352 PF00702 Hydrolase: haloacid d 55.2 4.1 8.9E-05 40.9 0.1 33 702-737 183-215 (215)
353 KOG3085 Predicted hydrolase (H 54.8 14 0.0003 38.2 3.8 37 700-739 171-208 (237)
354 PF04312 DUF460: Protein of un 54.1 13 0.00028 34.6 3.1 54 532-589 43-98 (138)
355 PRK11009 aphA acid phosphatase 52.9 22 0.00047 36.9 5.0 28 720-758 187-214 (237)
356 PF13477 Glyco_trans_4_2: Glyc 52.6 20 0.00044 33.0 4.4 40 130-171 67-107 (139)
357 PF09949 DUF2183: Uncharacteri 51.5 35 0.00077 30.2 5.4 37 291-331 49-85 (100)
358 PF12710 HAD: haloacid dehalog 50.5 8.3 0.00018 38.0 1.5 36 698-734 157-192 (192)
359 KOG0207 Cation transport ATPas 49.9 25 0.00055 42.6 5.4 69 689-778 766-838 (951)
360 KOG4626 O-linked N-acetylgluco 49.2 1.5E+02 0.0031 34.9 10.8 169 290-491 772-944 (966)
361 KOG3742 Glycogen synthase [Car 48.9 22 0.00047 39.5 4.3 70 364-452 493-577 (692)
362 COG4822 CbiK Cobalamin biosynt 45.0 3.5E+02 0.0076 27.4 15.5 160 173-374 32-193 (265)
363 COG4359 Uncharacterized conser 43.3 18 0.00039 35.4 2.4 39 551-590 72-110 (220)
364 TIGR01459 HAD-SF-IIA-hyp4 HAD- 42.9 37 0.0008 35.1 5.0 37 699-738 197-235 (242)
365 cd01570 NAPRTase_A Nicotinate 42.8 2.7E+02 0.006 30.3 11.8 108 244-371 189-298 (327)
366 PLN02177 glycerol-3-phosphate 40.6 29 0.00064 40.1 4.1 37 699-742 177-213 (497)
367 TIGR02093 P_ylase glycogen/sta 40.5 2.7E+02 0.0058 34.1 12.0 137 273-429 525-665 (794)
368 PRK13587 1-(5-phosphoribosyl)- 39.3 95 0.0021 32.1 7.2 61 519-587 32-95 (234)
369 PF13528 Glyco_trans_1_3: Glyc 39.0 68 0.0015 34.4 6.5 115 273-449 191-316 (318)
370 COG1819 Glycosyl transferases, 38.9 2.5E+02 0.0053 31.7 11.1 102 355-484 287-397 (406)
371 PF05159 Capsule_synth: Capsul 37.7 1.1E+02 0.0023 32.3 7.5 96 273-395 115-218 (269)
372 PHA03392 egt ecdysteroid UDP-g 36.0 3.1E+02 0.0066 32.0 11.5 78 353-454 347-433 (507)
373 smart00775 LNS2 LNS2 domain. T 32.3 87 0.0019 30.1 5.3 40 698-739 102-141 (157)
374 TIGR00250 RNAse_H_YqgF RNAse H 30.9 2.8E+02 0.0061 25.7 8.3 71 292-372 35-105 (130)
375 KOG2648 Diphthamide biosynthes 29.9 1.9E+02 0.0041 32.6 7.8 45 261-320 284-328 (453)
376 TIGR00661 MJ1255 conserved hyp 29.7 44 0.00096 36.1 3.2 66 363-452 239-313 (321)
377 PRK14985 maltodextrin phosphor 28.9 3.5E+02 0.0076 33.2 10.4 136 274-429 528-667 (798)
378 PF06189 5-nucleotidase: 5'-nu 28.1 70 0.0015 33.4 4.0 62 534-595 123-212 (264)
379 PLN02177 glycerol-3-phosphate 27.2 40 0.00086 39.0 2.3 15 532-546 22-36 (497)
380 KOG3085 Predicted hydrolase (H 26.4 65 0.0014 33.3 3.4 17 529-545 4-20 (237)
381 PF09419 PGP_phosphatase: Mito 26.2 1.6E+02 0.0034 28.8 5.8 42 697-738 114-158 (168)
382 PLN00414 glycosyltransferase f 25.7 6.4E+02 0.014 28.8 11.7 105 357-487 317-440 (446)
383 PRK00109 Holliday junction res 25.4 3.8E+02 0.0082 25.1 8.2 71 293-373 42-112 (138)
384 KOG0331 ATP-dependent RNA heli 25.1 2.8E+02 0.0062 32.1 8.5 94 278-381 131-225 (519)
385 PRK05632 phosphate acetyltrans 25.1 2.4E+02 0.0051 34.3 8.4 179 357-589 231-420 (684)
386 PF04464 Glyphos_transf: CDP-G 24.6 4.3E+02 0.0093 29.0 10.0 74 353-455 254-338 (369)
387 PRK11590 hypothetical protein; 24.6 1E+02 0.0022 31.1 4.5 36 554-590 97-133 (211)
388 PF12038 DUF3524: Domain of un 24.1 1.1E+02 0.0025 29.6 4.3 78 141-219 61-143 (168)
389 TIGR01513 NAPRTase_put putativ 23.6 7.1E+02 0.015 28.4 11.3 106 264-388 207-323 (443)
390 TIGR00007 phosphoribosylformim 23.4 2.3E+02 0.0049 28.9 6.9 63 518-588 28-92 (230)
391 KOG4549 Magnesium-dependent ph 23.4 1.9E+02 0.004 26.8 5.2 52 533-585 19-76 (144)
392 PF15024 Glyco_transf_18: Glyc 23.3 1.3E+02 0.0028 35.0 5.3 96 357-454 327-431 (559)
393 TIGR01449 PGP_bact 2-phosphogl 23.0 80 0.0017 31.5 3.4 37 553-590 86-122 (213)
394 COG4483 Uncharacterized protei 22.6 78 0.0017 25.4 2.4 27 702-735 6-32 (68)
395 cd03309 CmuC_like CmuC_like. P 22.4 5.4E+02 0.012 27.9 9.8 41 261-301 278-319 (321)
396 PF13419 HAD_2: Haloacid dehal 22.3 57 0.0012 30.9 2.1 38 552-590 77-114 (176)
397 COG2217 ZntA Cation transport 22.0 1.4E+02 0.0031 36.1 5.6 66 524-590 509-574 (713)
398 TIGR01548 HAD-SF-IA-hyp1 haloa 21.8 94 0.002 30.8 3.6 33 557-590 111-143 (197)
399 PRK14024 phosphoribosyl isomer 21.6 2.3E+02 0.0049 29.3 6.5 61 519-588 33-95 (241)
400 PF14201 DUF4318: Domain of un 20.9 1.7E+02 0.0036 24.4 4.1 41 532-578 1-41 (74)
401 PRK14114 1-(5-phosphoribosyl)- 20.5 3.5E+02 0.0077 28.0 7.6 62 518-588 30-93 (241)
402 KOG0390 DNA repair protein, SN 20.4 6.4E+02 0.014 30.9 10.5 74 280-370 565-639 (776)
403 COG0058 GlgP Glucan phosphoryl 20.3 1.1E+03 0.023 29.0 12.1 130 274-429 486-616 (750)
404 PRK13288 pyrophosphatase PpaX; 20.3 1E+02 0.0023 30.8 3.6 37 553-590 83-119 (214)
405 TIGR03351 PhnX-like phosphonat 20.1 93 0.002 31.3 3.2 37 553-590 88-124 (220)
406 PLN02954 phosphoserine phospha 20.1 1.2E+02 0.0025 30.7 3.9 37 553-590 85-121 (224)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=7.2e-167 Score=1472.50 Aligned_cols=786 Identities=80% Similarity=1.350 Sum_probs=729.5
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCC-CCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCC
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGE-DVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIP 79 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 79 (803)
|||||||||+.++++++++++|.|++++|||+++|.+++.+ ..+++||||+|.++++++++++.+.++++|+|+|||++
T Consensus 62 liiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~ 141 (854)
T PLN02205 62 IIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLP 141 (854)
T ss_pred EEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCC
Confidence 69999999999998765556899999999999999987754 37899999999888888888887778889999999999
Q ss_pred hhhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHh
Q 003682 80 PELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRK 159 (803)
Q Consensus 80 ~~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~ 159 (803)
+++++.||+||||++|||+|||+++..|+++.+|+++.|++|++||++||++|++.++|++|+|||||||||+||.+||+
T Consensus 142 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~ 221 (854)
T PLN02205 142 PDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRK 221 (854)
T ss_pred HHHHHHHHHhhhhccccchhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHh
Confidence 99999999999999999999999877776667899999999999999999999999998669999999999999999999
Q ss_pred hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEE
Q 003682 160 RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 239 (803)
Q Consensus 160 ~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 239 (803)
++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++....+.+.+.++||.++
T Consensus 222 ~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~ 301 (854)
T PLN02205 222 RFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVS 301 (854)
T ss_pred hCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999888777788999999999
Q ss_pred EeEecccCChhHHHHHhCCchHHHHHHHHHHHhC--CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003682 240 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFK--GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 317 (803)
Q Consensus 240 v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~--~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~ 317 (803)
|+++|+|||++.|...+..+++..++++++++++ ++++|++|||+|+.|||.++|+||++||++||+++++++||||+
T Consensus 302 v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia 381 (854)
T PLN02205 302 IKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIA 381 (854)
T ss_pred EEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEe
Confidence 9999999999999999999999999999999995 69999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
+|+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++|+.|||++|||+++||+|||||||++||+|||++
T Consensus 382 ~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~ 461 (854)
T PLN02205 382 NPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQG 461 (854)
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYW 477 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 477 (803)
++++...++.+..++++|+||+|||+||+++|.+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+|
T Consensus 462 ~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W 541 (854)
T PLN02205 462 NEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541 (854)
T ss_pred ccccccccccccccCCCCceEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 76666666666666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHH
Q 003682 478 ARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEA 557 (803)
Q Consensus 478 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~ 557 (803)
+++||++|.++++++....|+++|+|++||+++++++|++|+++.+.++|+++++|+|++||||||++..+....+++++
T Consensus 542 ~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~ 621 (854)
T PLN02205 542 ARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKS 621 (854)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHH
Confidence 99999999999887777789999999999999999999999999999999999999999999999998543356889999
Q ss_pred HHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcC
Q 003682 558 VAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETT 637 (803)
Q Consensus 558 ~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~ 637 (803)
+++|++||.++|+.|+|+|||++..++++++.+++++++++||++++.+++..|....+..+..|++.+..+++.|++++
T Consensus 622 ~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ert 701 (854)
T PLN02205 622 IDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETT 701 (854)
T ss_pred HHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999987767899999999999888778876544445679999999999999999
Q ss_pred CCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCc
Q 003682 638 DGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLP 717 (803)
Q Consensus 638 ~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~ 717 (803)
||+++|.|+.++.|||+.++++++..+++++.++++..+.+.+..+.+|+.++||+|+++|||.|++++++.+...|+++
T Consensus 702 pGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~ 781 (854)
T PLN02205 702 DGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLP 781 (854)
T ss_pred CchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999988888899999999988888788899999999999999999999999986543338899
Q ss_pred ccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 718 DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 718 d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
++++||||+.||++||+.++.......++..++.|+|+||.++|+|+|+++++++|.++|+.|++.+.+
T Consensus 782 d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~ 850 (854)
T PLN02205 782 DFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQ 850 (854)
T ss_pred ccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchh
Confidence 999999999999999999985322223344456799999999999999999999999999999976543
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=7.7e-151 Score=1324.20 Aligned_cols=744 Identities=37% Similarity=0.682 Sum_probs=664.3
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCch-hhhHHHHhhhcCceEEEeeCC
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCVPAFIP 79 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~~~ 79 (803)
|||||||||+.++++++ |.|.++++.|||+++|.+ + +..+++||||+|..++++ +++.+... +.+|+|+||||+
T Consensus 96 lIiVSNRlPv~~~~~~~--g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~l~ 170 (934)
T PLN03064 96 LLVVANRLPVSAVRRGE--DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVFLD 170 (934)
T ss_pred EEEEECCCCcceeecCC--CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEeCC
Confidence 69999999999988765 689999999999999976 4 478999999999876654 44555444 578999999999
Q ss_pred hhhhhhhhhcccccccccccccCCC-CCC-CCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHH
Q 003682 80 PELFSKFYHGFCKQHLWPLFHYMLP-LSP-DLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFL 157 (803)
Q Consensus 80 ~~~~~~~y~~~~~~~lwp~~H~~~~-~~~-~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~l 157 (803)
+++++.||+||||++|||+|||++. ..+ ....+|+++.|++|++||++||++|++.++| +|+|||||||||+||+||
T Consensus 171 ~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP~~L 249 (934)
T PLN03064 171 EEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLPKCL 249 (934)
T ss_pred HHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHH
Confidence 9999999999999999999999731 110 0114678899999999999999999999998 599999999999999999
Q ss_pred HhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeE
Q 003682 158 RKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRT 237 (803)
Q Consensus 158 r~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~ 237 (803)
|+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|++||+++|.|++|++.... .+.++||.
T Consensus 250 R~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~----~v~~~Gr~ 325 (934)
T PLN03064 250 KEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQGRL 325 (934)
T ss_pred HHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC----eEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999886443 48899999
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 317 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~ 317 (803)
++|.++|+|||++.|...+..+++.+++++++++++++++|++|||||+.|||.++|+||++||++||+|+++++||||+
T Consensus 326 v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa 405 (934)
T PLN03064 326 TRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIA 405 (934)
T ss_pred EEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
+|+|+++++|+++++++.++|++||++||+.+|.||+|+.+.++++++.++|++|||||+||++||||||++||||||..
T Consensus 406 ~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~ 485 (934)
T PLN03064 406 VPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDS 485 (934)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
+.|++|+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+
T Consensus 486 ---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~ 550 (934)
T PLN03064 486 ---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQE 550 (934)
T ss_pred ---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHH
Confidence 47999999999999999 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCC-------
Q 003682 477 WARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSI------- 549 (803)
Q Consensus 477 W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~------- 549 (803)
|+++|+++|.++..++... ... -++.|+.+.+.++|++++.++||+||||||++..+.
T Consensus 551 Wa~~fl~~L~~~~~~~~~~------------~~~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~ 615 (934)
T PLN03064 551 WAETFVSELNDTVVEAQLR------------TRQ---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQ 615 (934)
T ss_pred HHHHHHHHHHHHHhhhhcc------------ccc---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccccccc
Confidence 9999999999876543210 001 134789999999999999999999999999985422
Q ss_pred ----CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEe-ecCCCCccHHH
Q 003682 550 ----STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET-CVSVPDFSWKQ 624 (803)
Q Consensus 550 ----~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~-~~~~~~~~~~~ 624 (803)
...++++++++|++||.++++.|+|+|||+.+.++++++.+ +++++++||++++.++ ..|.. .....+..|++
T Consensus 616 ~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W~~ 693 (934)
T PLN03064 616 IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDWVD 693 (934)
T ss_pred ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHHHH
Confidence 33478999999999999999999999999999999999876 7999999999998764 46873 33333568999
Q ss_pred HHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHH-HHhcCCCeEEEECCeEEEEEeCCCCHHHHH
Q 003682 625 IAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLE-SVLANEPVSVKSGPNIVEVKPQGVNKGLVA 703 (803)
Q Consensus 625 ~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~-~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al 703 (803)
.+..++++|++++||+++|.|+++++|||+.+||+++..|++++.+++. ..+.+.++.+..|+.++||+|.++|||.|+
T Consensus 694 ~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av 773 (934)
T PLN03064 694 SVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAI 773 (934)
T ss_pred HHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999984 445566789999999999999999999999
Q ss_pred HHHHHHhhhCC---CCcccEEEEeCChh-hHHHHHHcchhcCC------------------------------CCC----
Q 003682 704 QHQLETMHQKG---MLPDFVLCIGDDRS-DEDMFEVIKSAAAG------------------------------PSL---- 745 (803)
Q Consensus 704 ~~ll~~l~~~g---i~~d~vla~GD~~N-Di~Mf~~ag~s~a~------------------------------~~~---- 745 (803)
+.+++++...+ .++|+|+|+||+.. |++||+++...... .+.
T Consensus 774 ~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (934)
T PLN03064 774 DRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQ 853 (934)
T ss_pred HHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccc
Confidence 99999763221 35899999999875 99999998642110 000
Q ss_pred ----------------------------C----------CCcceEEEEeCCCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 746 ----------------------------S----------PVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 746 ----------------------------~----------~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
+ ...+.|+|+||.+.+.|+|++++.+||..+|+.|++....
T Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 854 GKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 0 1234599999999999999999999999999999987643
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=2.7e-143 Score=1274.50 Aligned_cols=743 Identities=37% Similarity=0.685 Sum_probs=658.2
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCch-hhhHHHHhhhcCceEEEeeCC
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCVPAFIP 79 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~~~ 79 (803)
|||||||||+.++++++ |+|+++++.|||+++|.+. . ..+++||||+|.+++++ ++..+.. .+.+++|+||||
T Consensus 13 liiVsnrlp~~~~~~~~--~~~~~~~~~ggl~~al~~~-~-~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~pv~l- 86 (797)
T PLN03063 13 LLVVANRLPVSAKRTGE--DSWSLEMSPGGLVSALLGV-K-EFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIPVFL- 86 (797)
T ss_pred EEEEECCCCccceecCC--CceEEeeCCCCHHHHHHHH-H-hcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEEeeh-
Confidence 69999999999887654 6999999999999999864 4 57999999999866554 3334443 457899999999
Q ss_pred hhhhhhhhhcccccccccccccCC-CCCCC-CCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHH
Q 003682 80 PELFSKFYHGFCKQHLWPLFHYML-PLSPD-LGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFL 157 (803)
Q Consensus 80 ~~~~~~~y~~~~~~~lwp~~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~l 157 (803)
+++++.||+||||++|||+|||+. +..+. ...++.++.|++|++||++||++|++.++| +|+|||||||||+||+||
T Consensus 87 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~llp~~l 165 (797)
T PLN03063 87 NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFLPQYL 165 (797)
T ss_pred HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhHHHHH
Confidence 999999999999999999999982 21111 113566789999999999999999999998 599999999999999999
Q ss_pred HhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeE
Q 003682 158 RKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRT 237 (803)
Q Consensus 158 r~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~ 237 (803)
|+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|++++|++.... .+.++|+.
T Consensus 166 R~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~~gr~ 241 (797)
T PLN03063 166 KEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVDQGKV 241 (797)
T ss_pred HHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEECCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999876543 37799999
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 317 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~ 317 (803)
++|.++|+|||++.|.+....+++......++++++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++
T Consensus 242 ~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia 321 (797)
T PLN03063 242 TRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIA 321 (797)
T ss_pred EEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEe
Confidence 99999999999999998777777777788889889999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
.|+|+++++|+++++++++++++||++||+..|.||+++.+.++.+++.++|++|||||+||++||||||++|||||+.+
T Consensus 322 ~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p 401 (797)
T PLN03063 322 VPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKA 401 (797)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
+.|++|+||++|+++++ .+|++|||||++++|+||.++|+|+++||+.|++++++++.+|++.+
T Consensus 402 ---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 466 (797)
T PLN03063 402 ---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQK 466 (797)
T ss_pred ---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHH
Confidence 37999999999999999 47999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCC-----CCC
Q 003682 477 WARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGS-----IST 551 (803)
Q Consensus 477 W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~-----~~~ 551 (803)
|+++|+++|.++.+++.... ...+..|+.+.+.++|++++.++|++||||||++..+ ...
T Consensus 467 Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a 531 (797)
T PLN03063 467 WADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDL 531 (797)
T ss_pred HHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccccC
Confidence 99999999999876542110 1234578999999999999999999999999998532 235
Q ss_pred CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeec-CCCCccHHHHHHHHH
Q 003682 552 SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCV-SVPDFSWKQIAEPVM 630 (803)
Q Consensus 552 ~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~-~~~~~~~~~~~~~i~ 630 (803)
.++++++++|++||.++++.|+|+|||+.+.++++++.. +++++++||++++.. +..|.... ...+..|++.+..++
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~~l 609 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKNVF 609 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHHHH
Confidence 588999999999999999999999999999999999865 799999999999865 34787543 223567999999999
Q ss_pred HHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHH-HhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHH
Q 003682 631 KLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLES-VLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 709 (803)
Q Consensus 631 ~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~-~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~ 709 (803)
++|++++||+++|.|++++.|||+.+||+++..++.++.+++.+ .+.+.++.+..|+.++||+|.++|||.|++.++++
T Consensus 610 ~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~ 689 (797)
T PLN03063 610 KYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGE 689 (797)
T ss_pred HHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999988899999998844 34566789999999999999999999999999997
Q ss_pred hhhC---CCCcccEEEEeCCh-hhHHHHHHcchhcCC--------CC-----------CCCCcceEEEEeCCCCccceeE
Q 003682 710 MHQK---GMLPDFVLCIGDDR-SDEDMFEVIKSAAAG--------PS-----------LSPVAEVFACTVGQKPSKAKYY 766 (803)
Q Consensus 710 l~~~---gi~~d~vla~GD~~-NDi~Mf~~ag~s~a~--------~~-----------~~~~~~~~~v~vG~~~s~A~~~ 766 (803)
+... +..+|+|+|+||+. .|++||++.+..... .. .....++|+|+||.++|+|+|+
T Consensus 690 ~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~y~ 769 (797)
T PLN03063 690 IVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKARYV 769 (797)
T ss_pred hhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCccCeec
Confidence 5211 23679999999985 599999988642100 00 1123467999999999999999
Q ss_pred eCCHhHHHHHHHHHHHhhcc
Q 003682 767 LDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 767 v~~~~ev~~~L~~l~~~~~~ 786 (803)
+++++||.++|+.|++.+++
T Consensus 770 l~~~~eV~~lL~~l~~~~~~ 789 (797)
T PLN03063 770 LDSSNDVVSLLHKLAVANTT 789 (797)
T ss_pred CCCHHHHHHHHHHHhccCcc
Confidence 99999999999999986554
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=1.7e-137 Score=1230.83 Aligned_cols=718 Identities=37% Similarity=0.668 Sum_probs=651.9
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCc---hhhhHHHHhhhcCceEEEee
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDL---SEQDEVSQTLLETFKCVPAF 77 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv~ 77 (803)
|||||||||+.+++++ |+|++++++|||+++|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+|||
T Consensus 3 livvsnr~p~~~~~~~---~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v~ 77 (726)
T PRK14501 3 LIIVSNRLPVTVVRED---GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPVF 77 (726)
T ss_pred EEEEEcCCCcceeecC---CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEEe
Confidence 6999999999988764 589999999999999987655 5899999999976544 2223333 346789999999
Q ss_pred CChhhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHH
Q 003682 78 IPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFL 157 (803)
Q Consensus 78 ~~~~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~l 157 (803)
+++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+||||||||++||++|
T Consensus 78 l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 78 LSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAML 151 (726)
T ss_pred CCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhhhHHHHH
Confidence 9999999999999999999999999876 5799999999999999999999999998 599999999999999999
Q ss_pred HhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeE
Q 003682 158 RKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRT 237 (803)
Q Consensus 158 r~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~ 237 (803)
|++.|+++||||||||||++++|++||+|++|++|||+||+|||||++|++||+++|.++++++.... .+.++|+.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr~ 227 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGRI 227 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999775432 57899999
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 317 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~ 317 (803)
++|.++|+|||++.|.+...++.+.+..+++++.++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+
T Consensus 228 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~ 307 (726)
T PRK14501 228 VRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVA 307 (726)
T ss_pred EEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEe
Confidence 99999999999999998887777777788888888899999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
.|+|.+.++|+++++++++++++||++||+.+|.|++++.+.+++++++++|++|||||+||++||||||++||||||.+
T Consensus 308 ~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~ 387 (726)
T PRK14501 308 VPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTD 387 (726)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCC
Confidence 99988889999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYW 477 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 477 (803)
+.|++|+|+++|+++++.+|++|||+|++++|+||.++|+|+.++++.|++++++++.++|+.+|
T Consensus 388 ---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w 452 (726)
T PRK14501 388 ---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKW 452 (726)
T ss_pred ---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHH
Confidence 36899999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCC--CCCCCCCH
Q 003682 478 ARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPG--SISTSPNA 555 (803)
Q Consensus 478 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~--~~~~~is~ 555 (803)
+++|++.+.++.+++... . ...++.++.+.+.++|+.++.|+|++|+||||++.. +....+++
T Consensus 453 ~~~~l~~l~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~ 517 (726)
T PRK14501 453 ASDFLDELREAAEKNKAF-----------A----SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDK 517 (726)
T ss_pred HHHHHHHHHHHHhhhhcc-----------c----cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCH
Confidence 999999999987654211 0 123567899999999999999999999999999843 23456889
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhh
Q 003682 556 EAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTE 635 (803)
Q Consensus 556 ~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~ 635 (803)
+++++|++|++++|+.|+|+|||+...++++++.+ +++++++||++++.++ ..|..... .+..|++.+.++++.|.+
T Consensus 518 ~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~~ 594 (726)
T PRK14501 518 ELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFVD 594 (726)
T ss_pred HHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHHh
Confidence 99999999977789999999999999999999876 5789999999998664 46765432 356799999999999999
Q ss_pred cCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCC
Q 003682 636 TTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM 715 (803)
Q Consensus 636 ~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi 715 (803)
+++|++++.++.++.|||+.++++++..+++++.+.+...+.+..+.+..|+.++||+|+++|||.|++++++ ++
T Consensus 595 ~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~~ 669 (726)
T PRK14501 595 RTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----AG 669 (726)
T ss_pred cCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----cC
Confidence 9999999999999999999998888878888889998887777778888999999999999999999999998 56
Q ss_pred CcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHHHHHHHHH
Q 003682 716 LPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAE 782 (803)
Q Consensus 716 ~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~~l~~ 782 (803)
++++++||||+.||++||+.++. ..++|+||++++.|+|+++++++|.++|+.|++
T Consensus 670 ~~d~vl~~GD~~nDe~Mf~~~~~-----------~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 670 PYDFVLAIGDDTTDEDMFRALPE-----------TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CCCEEEEECCCCChHHHHHhccc-----------CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 78999999999999999999853 127999999999999999999999999999874
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-116 Score=1009.17 Aligned_cols=725 Identities=55% Similarity=0.965 Sum_probs=669.6
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCCh
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
+|+||||||+.+.+..++ +.|.|++++|||++++...+. ..+..||||.+.++++++++.+...++...+|+||++++
T Consensus 5 ~i~vsn~lp~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 82 (732)
T KOG1050|consen 5 IIVVSNRLPLKASKRTDT-GKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLDD 82 (732)
T ss_pred EEEEEccCceecccccCC-CceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecCC
Confidence 589999999998655444 799999999999999977655 678999999998889999999988899999999999999
Q ss_pred hhhhhhhhcccccccccccccC-CCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHh
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRK 159 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~ 159 (803)
+....+|++|||++|||+|||+ .+..+... .|+.+.|++|+.+|+.||++|++.+++ +|+|||||||||++|+++|+
T Consensus 83 ~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~~-~d~vwihdyhlmllp~~lr~ 160 (732)
T KOG1050|consen 83 ELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYEE-GDIVWIHDYHLMLLPQMLRE 160 (732)
T ss_pred chhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhccC-CCcEEEEcchhhccchhhhc
Confidence 9999999999999999999999 55444433 567889999999999999999999995 79999999999999999999
Q ss_pred hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEE
Q 003682 160 RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 239 (803)
Q Consensus 160 ~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 239 (803)
+..+++||||+|.|||++|+|+|+|.|++|+.||+++|+||||+++|+|||+++|.|+++++..+..+...+.+.||.+.
T Consensus 161 ~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~ 240 (732)
T KOG1050|consen 161 RFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVS 240 (732)
T ss_pred ccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999886655666899999999
Q ss_pred EeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003682 240 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANP 319 (803)
Q Consensus 240 v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~ 319 (803)
|.+.|+|||+.+|......+.+.....++++.++|+++|++|||+|+.||+..++.||++++++||+++++|+|+|+..|
T Consensus 241 v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~ 320 (732)
T KOG1050|consen 241 VKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENP 320 (732)
T ss_pred eeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecC
Confidence 99999999999999999989999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCc
Q 003682 320 ARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 399 (803)
Q Consensus 320 ~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~ 399 (803)
++++++++++++.++...+.+||++||+..+.||+++...++..++.++|.+||+++++|++|||||+++||++|+..
T Consensus 321 ~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~-- 398 (732)
T KOG1050|consen 321 KRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN-- 398 (732)
T ss_pred CcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred ccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHH
Q 003682 400 KLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 478 (803)
Q Consensus 400 ~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~ 478 (803)
+.+++|+|+|+|+++.+ ++++++||||.++++.+|..+++|+.+++..|+...+.++..++...|+
T Consensus 399 -------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~ 465 (732)
T KOG1050|consen 399 -------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWA 465 (732)
T ss_pred -------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHH
Confidence 46999999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHH
Q 003682 479 RSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAV 558 (803)
Q Consensus 479 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~ 558 (803)
..|++.+.+..+. |+ +.+++.. .|+.+.+...|+++++|+|++|+|||++...+.. +.
T Consensus 466 ~~~~~~l~~~~~~---------~~-~~~~~~~------~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~ 523 (732)
T KOG1050|consen 466 KSFLQGLKRIWKV---------GF-LGFRVTP------LLTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AI 523 (732)
T ss_pred HHHHHhhhhhhhh---------cc-ccccccc------ccChhHhhhhhhhccceEEEecccccccCCCCch------HH
Confidence 9999976665443 44 4444333 2788999999999999999999999999843221 99
Q ss_pred HHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCC
Q 003682 559 AILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTD 638 (803)
Q Consensus 559 ~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~ 638 (803)
..|+.||.++++.|+|+|||++..+..++...++++++||||++++.+++ |.... .+.+|++.+++++++|++++|
T Consensus 524 ~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~ 599 (732)
T KOG1050|consen 524 SILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTP 599 (732)
T ss_pred HHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999888899999999999999887 98876 678999999999999999999
Q ss_pred CceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcc
Q 003682 639 GSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPD 718 (803)
Q Consensus 639 g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d 718 (803)
|+++|.++.++.|||++++++++..||+++.++|+. .+.++.+..|+..||+.|.|+|||.++..++..+ .-++|
T Consensus 600 GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~d 674 (732)
T KOG1050|consen 600 GSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPD 674 (732)
T ss_pred CceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCCcc
Confidence 999999999999999999999999999999999987 7788999999999999999999999999999998 55679
Q ss_pred cEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHHHHH
Q 003682 719 FVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 778 (803)
Q Consensus 719 ~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~ 778 (803)
+++|+||+..|++||.......-..+. ...|+|++|.++|.|+|+++++.+|.++|+
T Consensus 675 f~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 675 FVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred eEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 999999999999999998764221111 567999999999999999999999999875
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=1.4e-117 Score=977.41 Aligned_cols=453 Identities=30% Similarity=0.565 Sum_probs=418.2
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCCh
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
|||||||+|+.. + + +.++|||+++|.+.+. ..+++||||+|...+++ +.+......+++|.||+|++
T Consensus 4 LivVSNRlp~~~-----~---~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~~--~~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 4 LVVVSNRIAPPD-----E---H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNED--QPLKKVKKGNITWASFNLSE 70 (474)
T ss_pred EEEEECCCcCCC-----C---C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCCc--ccchhhhcCCceEEEecCCH
Confidence 699999999621 1 1 4567999999988765 57999999999643322 22333333579999999999
Q ss_pred hhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhh
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKR 160 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~ 160 (803)
++++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+||||||||++||++||++
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR~~ 144 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELRKR 144 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHHHh
Confidence 9999999999999999999999875 5799999999999999999999999998 599999999999999999999
Q ss_pred CCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEE
Q 003682 161 FNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240 (803)
Q Consensus 161 ~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v 240 (803)
+|+++||||||||||++|+|++||+|++|++|||+||+|||||++|++||+++|++++|++.... ..+.++||.++|
T Consensus 145 ~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~v 221 (474)
T PRK10117 145 GVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFRT 221 (474)
T ss_pred CCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999876432 246788999999
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA 320 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~ 320 (803)
+++|+|||++.|...+.++ .....++++++++++++|++|||+||+|||+++|+||++||++||+++++++|+||+.|+
T Consensus 222 ~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ps 300 (474)
T PRK10117 222 EVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS 300 (474)
T ss_pred EEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCC
Confidence 9999999999999887755 466788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcc
Q 003682 321 RGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 400 (803)
Q Consensus 321 ~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~ 400 (803)
|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.++|++|||+++||+|||||||++||+|||.+
T Consensus 301 R~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~--- 377 (474)
T PRK10117 301 RGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP--- 377 (474)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred cccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHH
Q 003682 401 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480 (803)
Q Consensus 401 ~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~ 480 (803)
+++|+||+|||+|++++|.+|++|||||++++|+||.+||+||.+||+.|++.++++|.+||+.+|+++
T Consensus 378 -----------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~ 446 (474)
T PRK10117 378 -----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQEC 446 (474)
T ss_pred -----------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHH
Confidence 247999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 003682 481 FLQDLERACR 490 (803)
Q Consensus 481 ~l~~l~~~~~ 490 (803)
||++|.++..
T Consensus 447 fL~~L~~~~~ 456 (474)
T PRK10117 447 FISDLKQIVP 456 (474)
T ss_pred HHHHHHHhhh
Confidence 9999998753
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=2.1e-116 Score=980.05 Aligned_cols=463 Identities=28% Similarity=0.480 Sum_probs=427.2
Q ss_pred EEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchh-h-hHHHHhhhcCceEEEeeCChh
Q 003682 4 VGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE-Q-DEVSQTLLETFKCVPAFIPPE 81 (803)
Q Consensus 4 vs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~-~-~~~~~~~~~~~~~~pv~~~~~ 81 (803)
||||||+.+++++++..+|.+++++|||+++|.+.+.+..+++||||+|...++++ . ..+......+++|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 79999999998765312487899999999999987765678999999997532211 1 112212235799999999999
Q ss_pred hhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhC
Q 003682 82 LFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRF 161 (803)
Q Consensus 82 ~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~ 161 (803)
+++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+||||||||++||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999999765 5899999999999999999999999998 5999999999999999999999
Q ss_pred CCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccC---------------
Q 003682 162 NRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKR--------------- 226 (803)
Q Consensus 162 ~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~--------------- 226 (803)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998765431
Q ss_pred --ceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhC
Q 003682 227 --GYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQN 304 (803)
Q Consensus 227 --~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~ 304 (803)
....+.++||.++|+++|+|||++.|.+...++++.+..+.+|++++++++|++|||+|++|||+++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 113478999999999999999999999988888888889999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCC
Q 003682 305 PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGM 384 (803)
Q Consensus 305 p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~ 384 (803)
|+++++++||||+.|+|+++++|++++++++++|++||++||+.+|+|++++++.++++++.++|++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 003682 385 NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEK 464 (803)
Q Consensus 385 ~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~ 464 (803)
|||++||||||.+ ++||||+|||+|+++++.+|++|||||++++|+||.+||+||.+||+.|+++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999874 4799999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCCHHHHHHHHHHHHHH
Q 003682 465 HYRYVSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 465 ~~~~v~~~~~~~W~~~~l~~l~~ 487 (803)
++++|.+||+.+|+++||++|..
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999875
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=4.3e-116 Score=981.18 Aligned_cols=466 Identities=46% Similarity=0.866 Sum_probs=358.9
Q ss_pred CEEEEccCccceEeCCCCCCC--eEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchh--hhHHHHhhhcCceEEEe
Q 003682 1 MIIVGNQLPLRAHRSSDGSGG--WTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE--QDEVSQTLLETFKCVPA 76 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~pv 76 (803)
|||||||||+.++++++. |. |+++.+.|||+++|.+.+. ..+++||||+|...+..+ ++.+...+.++|+|+||
T Consensus 3 livVsnrlPv~~~r~~~~-G~~~~~~~~~~ggL~~al~~l~~-~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 3 LIVVSNRLPVSVKRDPDD-GSWGWSWKPSAGGLVSALDPLLK-KRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHH-HH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred cccccccccccccccccc-cccccccccCCCcHHHHHHHHHh-cCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 689999999999988732 45 8888899999999977544 589999999998776544 55666677899999999
Q ss_pred eCChhhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHH
Q 003682 77 FIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTF 156 (803)
Q Consensus 77 ~~~~~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~ 156 (803)
|+++++++.||+||||++|||+|||.++..+ ....|+.+.|++|++||++||++|++.++| +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-DLARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 9999999999999999999999999876111 126889999999999999999999999997 59999999999999999
Q ss_pred HHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCe
Q 003682 157 LRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGR 236 (803)
Q Consensus 157 lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~ 236 (803)
||+++|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||+++|++++|+++....+ .+.++||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 6899999
Q ss_pred EEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCC-CEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003682 237 TVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 315 (803)
Q Consensus 237 ~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~-~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 315 (803)
.++|.++|+|||++.|...+.++++.++.+++++++++ +++|++|||+|++|||.++|+||++||++||+++++++|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 59999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeee
Q 003682 316 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 316 i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~ 395 (803)
|+.|+|.++++|++++++++++|++||++||+.+|+||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcccccccCCCCCCCCCceEEecccccccccCC-CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCH
Q 003682 396 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDV 474 (803)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~ 474 (803)
.+ ++|+||+|||+|++++|. ++++|||||++++|+||.+||+|+++||+.|+++++++|.++|+
T Consensus 397 ~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~ 461 (474)
T PF00982_consen 397 DD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDV 461 (474)
T ss_dssp -T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-H
T ss_pred cC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCH
Confidence 85 479999999999999997 56999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 003682 475 AYWARSFLQDLER 487 (803)
Q Consensus 475 ~~W~~~~l~~l~~ 487 (803)
.+|+++||++|++
T Consensus 462 ~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 462 QWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999874
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.4e-111 Score=917.10 Aligned_cols=459 Identities=41% Similarity=0.708 Sum_probs=426.1
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCCh
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
+|+||||+|++..+..++ +...+..++|||+++|.+.+. ..+++|+||+|...++.+..........++...||.++.
T Consensus 17 ~ivvsnR~p~~~~~~~~~-~~~~~~~s~ggL~~~l~~~~~-~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 94 (486)
T COG0380 17 LIVVSNRLPVKKTPEGDK-GIEFGKRSAGGLVTALKPLLR-VDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPVILSD 94 (486)
T ss_pred EEEEEccCCCcccccCCC-cceeeccCCcchhhhcchhhH-hhcceEEecCceeccccccchhhhhccccceEEEEecCH
Confidence 589999999998655544 578889999999999987554 689999999998765333233333334589999999999
Q ss_pred hhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhh
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKR 160 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~ 160 (803)
+++++||+||||++|||+|||+.+. ..|++.+|++|++||++||++|++.+++ ||+||||||||+|||+|||++
T Consensus 95 ~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P~mlR~~ 168 (486)
T COG0380 95 EDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVPQMLRER 168 (486)
T ss_pred HHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhHHHHHHh
Confidence 9999999999999999999999876 5789999999999999999999999998 599999999999999999999
Q ss_pred CCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEE---EcCeE
Q 003682 161 FNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE---YFGRT 237 (803)
Q Consensus 161 ~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~---~~g~~ 237 (803)
.|+++||||||||||++|+|+|||+|++|++|||+||+||||+++|++||+.+|+++++..... .+. ++|+.
T Consensus 169 ~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~-----~~~~~~~~~~~ 243 (486)
T COG0380 169 IPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA-----DIRFNGADGRI 243 (486)
T ss_pred CCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccc-----cccccccCCce
Confidence 9999999999999999999999999999999999999999999999999999999999865211 233 34799
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCC-CEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 316 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~-~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i 316 (803)
+++.++|+|||+..|.....++.+..+..++++.+.+ +++|++|||+|++||++.+++||++||++||+++++++|+||
T Consensus 244 v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi 323 (486)
T COG0380 244 VKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQI 323 (486)
T ss_pred EEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEe
Confidence 9999999999999999999989888889999998866 999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 317 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 317 ~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++++++.+||++||++++||+|||||||++||+|||.
T Consensus 324 ~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~ 403 (486)
T COG0380 324 APPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQR 403 (486)
T ss_pred cCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 397 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
. ++|++|+|||+|++.+|.+|++|||||.+++|++|.+||+|+++||+.|++.+++.|.+||+++
T Consensus 404 ~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~ 468 (486)
T COG0380 404 D---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVAR 468 (486)
T ss_pred C---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHH
Confidence 4 4899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003682 477 WARSFLQDLER 487 (803)
Q Consensus 477 W~~~~l~~l~~ 487 (803)
|+++|+++|..
T Consensus 469 W~~~fl~~la~ 479 (486)
T COG0380 469 WANSFLDDLAQ 479 (486)
T ss_pred HHHHHHHHHHh
Confidence 99999999987
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=9.5e-106 Score=902.70 Aligned_cols=453 Identities=40% Similarity=0.712 Sum_probs=421.9
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCch-hhhHHHHhhhcCceEEEeeCC
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCVPAFIP 79 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~~~ 79 (803)
|||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...+++ ++..+...+..+++|+||||+
T Consensus 2 livvsnr~p~~~~~~----~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 2 LIVVSNRLPVPITRG----G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred EEEEECCCCccccCC----C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 699999999987653 2 56788999999988665 57999999999765533 334454556778999999999
Q ss_pred hhhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHh
Q 003682 80 PELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRK 159 (803)
Q Consensus 80 ~~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~ 159 (803)
+++++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+||||||||++||++||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999765 5899999999999999999999999998 59999999999999999999
Q ss_pred hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEE
Q 003682 160 RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 239 (803)
Q Consensus 160 ~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 239 (803)
+.|+++||||||||||++|+|++||+|++|++|||+||+|||||++|++||+++|++++|.+.... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876543 3668899999
Q ss_pred EeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003682 240 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANP 319 (803)
Q Consensus 240 v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~ 319 (803)
|.++|+|||++.|.+....+++.+....+|++++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888778888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCc
Q 003682 320 ARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 399 (803)
Q Consensus 320 ~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~ 399 (803)
+|+++++|+++++++++++++||++||+.+|.|++++.+.++++++.++|++|||||+||++||||||++|||||+.|.
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~- 382 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPK- 382 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998763
Q ss_pred ccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHH
Q 003682 400 KLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 479 (803)
Q Consensus 400 ~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 479 (803)
.|+||+|+++|+++++.+|++|||+|++++|+||.++|+|+++||+.|++++++++.++|+.+|++
T Consensus 383 --------------~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 448 (456)
T TIGR02400 383 --------------DGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRE 448 (456)
T ss_pred --------------CceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 003682 480 SFLQDLE 486 (803)
Q Consensus 480 ~~l~~l~ 486 (803)
+|+.+|.
T Consensus 449 ~~l~~l~ 455 (456)
T TIGR02400 449 DFLSDLN 455 (456)
T ss_pred HHHHHhh
Confidence 9999875
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=1.8e-96 Score=834.81 Aligned_cols=458 Identities=47% Similarity=0.809 Sum_probs=426.5
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCCh
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
|||||||+|+.++++++ |.|.++++.|||+++|.+.+. ..+++||||++...+.++...+......+|+|+|||+++
T Consensus 2 li~vsnr~p~~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 2 LVVVSNRLPVSIERDGD--GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred EEEEECCCCceeEEcCC--CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 69999999999998875 599999999999999987555 579999999998766544434455567899999999999
Q ss_pred hhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhh
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKR 160 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~ 160 (803)
++++.||+||||++|||+|||+++. .+|++++|++|++||++||++|++.++| +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 5799999999999999999999999997 599999999999999999999
Q ss_pred CCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEE
Q 003682 161 FNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240 (803)
Q Consensus 161 ~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v 240 (803)
.++++||||+|||||++++|+++|+|++|+++||+||+||||+++|+++|+++|+++++++..... .+.++|+.+++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~---~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG---GVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCc---eEEECCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999998866532 58899999999
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA 320 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~ 320 (803)
.++|+|||++.|.+...+++..+..++++..++++++|++|||+++.||+..+|+||+++++++|+++++++|+|+|.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998777666666666777777889999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcc
Q 003682 321 RGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 400 (803)
Q Consensus 321 ~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~ 400 (803)
++++++++++++++++++++||.++|+.+|.+++++.+.++.+++.++|++||+||+||.+||||||++|||||+.|
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred cccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHH
Q 003682 401 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480 (803)
Q Consensus 401 ~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~ 480 (803)
++|+||+|+++|++++..+|++|||+|++++|++|.++|+|++++|+.+++++++++.++++..|+++
T Consensus 387 ------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~ 454 (460)
T cd03788 387 ------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANS 454 (460)
T ss_pred ------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 37899999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 003682 481 FLQDL 485 (803)
Q Consensus 481 ~l~~l 485 (803)
|+++|
T Consensus 455 ~l~~l 459 (460)
T cd03788 455 FLDDL 459 (460)
T ss_pred HHHhh
Confidence 99887
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=2.5e-36 Score=356.73 Aligned_cols=564 Identities=13% Similarity=0.110 Sum_probs=334.2
Q ss_pred HHhHHHHHHHHHHHHHHHHh-------hc------CCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhh
Q 003682 115 RSLWQAYVSVNKIFADKVME-------VI------SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~-------~~------~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~ 181 (803)
++.|..-.+++..+.+.+.+ .+ .| |+|+-|+++--.++..|++.. ++|..++.|.. ..+-++
T Consensus 275 e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~p--DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~ 349 (1050)
T TIGR02468 275 EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWP--YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLE 349 (1050)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCC--CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhh
Confidence 34577777777766665542 11 24 999999888777888877765 68899999942 111111
Q ss_pred -----------------cCCCcHHH-HHHHhcCCEEeccCHhhHHHHHHHHH-------HHhCceecccCceeeEEEcCe
Q 003682 182 -----------------TLPIRDEL-LRALLNADLIGFHTFDYARHFLSCCS-------RMLGVSYQSKRGYIGLEYFGR 236 (803)
Q Consensus 182 -----------------~lp~~~~i-l~~ll~~dligf~~~~~~~~Fl~~~~-------~~l~~~~~~~~~~~~~~~~g~ 236 (803)
.++.|-+. -..+-.||.|--.|......-..... |.|... ..+ ++..+|+
T Consensus 350 ~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~--~~~---gv~~~g~ 424 (1050)
T TIGR02468 350 QLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRAR--ARR---GVSCYGR 424 (1050)
T ss_pred hhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhh--hcc---ccccccc
Confidence 01112111 12466788888777666553222110 111000 001 1222222
Q ss_pred -EEEEeEecccCChhHHHHHhCCchHH-------------HHHHHHHHHh--CCCEEEEeecCcccccCHHHHHHHHHHH
Q 003682 237 -TVSIKILPVGIHIGQLQSVLNLPETE-------------AKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQL 300 (803)
Q Consensus 237 -~~~v~v~p~Gid~~~f~~~~~~~~~~-------------~~~~~l~~~~--~~~~iil~V~Rld~~Kgi~~~l~A~~~l 300 (803)
..++.|+|+|||++.|.+........ .....++..+ +++++|++|||+++.||+..+|+||..+
T Consensus 425 ~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L 504 (1050)
T TIGR02468 425 FMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGEC 504 (1050)
T ss_pred CCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHh
Confidence 22788999999999998642211100 0112333333 6788999999999999999999999988
Q ss_pred HHhCCCCCCcEEEEEEecCCCCCchhH----HHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc----
Q 003682 301 LSQNPSKRGKIVLVQIANPARGRGRDV----QEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA---- 372 (803)
Q Consensus 301 l~~~p~~~~~v~lv~i~~~~~~~~~~~----~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~A---- 372 (803)
.+..+.. ++.+ ++|... +.+.. .....++.+++.+ .+....+.|.|.+++++++++|+.|
T Consensus 505 ~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li~~-------lgL~g~V~FlG~v~~edvp~lYr~Ad~s~ 572 (1050)
T TIGR02468 505 RPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLIDK-------YDLYGQVAYPKHHKQSDVPDIYRLAAKTK 572 (1050)
T ss_pred HhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHHHH-------hCCCCeEEecCCCCHHHHHHHHHHhhhcC
Confidence 6543321 3333 345321 11111 1233445555555 3344567788899999999999998
Q ss_pred ccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHH
Q 003682 373 ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 373 dv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~ 449 (803)
|+||+||++||||++++||||| |.|||+|+.+|..+.+. +|++|+|.|++++|++|.+
T Consensus 573 DVFV~PS~~EgFGLvlLEAMAc-------------------GlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~ 633 (1050)
T TIGR02468 573 GVFINPAFIEPFGLTLIEAAAH-------------------GLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLK 633 (1050)
T ss_pred CeeeCCcccCCCCHHHHHHHHh-------------------CCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHH
Confidence 6999999999999999999999 67899999999998883 5999999999999999999
Q ss_pred HhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHhhccccccc-----------cCcC--------cceeEee
Q 003682 450 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHMRRRCWG-----------IGFG--------LGFRVVA 510 (803)
Q Consensus 450 aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~-----------~~~~--------~~~~~~~ 510 (803)
+|.. ++.+....+..++.+..+++...++++++.+......+..-.... .+.+ +++.+..
T Consensus 634 LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 712 (1050)
T TIGR02468 634 LVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDG 712 (1050)
T ss_pred HhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccchhhccccc
Confidence 9984 444555566666777889999999999988887654331000000 0100 0000000
Q ss_pred c----C--ccc-cCCCH----HHHHHHHH-------------------------hcCCeEEE--EecCCcCCCCCCCCCC
Q 003682 511 L----D--PNF-RKLSI----DHIVSAYK-------------------------RTKNRAIL--LDYDGTIMVPGSISTS 552 (803)
Q Consensus 511 ~----~--~~~-~~l~~----~~~~~~y~-------------------------~~~~kli~--~DlDGTLl~~~~~~~~ 552 (803)
- . .+. ..++. ..+..+.+ ....++|+ +|+|+| .. .
T Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~-- 785 (1050)
T TIGR02468 713 DKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----L-- 785 (1050)
T ss_pred cccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCccccccceEEEEEeccCCC-CC----h--
Confidence 0 0 000 00010 01111111 11246666 999999 32 1
Q ss_pred CCHHHHHHHHHHh---cCCCCeEEEEcCCChhhHHHHhhcC--C---CCcEEecCcEEEEeCCc-----eeEEee---cC
Q 003682 553 PNAEAVAILDNLC---RDPKNVVFLVSGKDRDTLAEWFSSC--E---GLGIAAEHGYFVRPNYG-----VDWETC---VS 616 (803)
Q Consensus 553 is~~~~~aL~~L~---~~~g~~v~IaTGR~~~~l~~~~~~l--~---~l~lia~nGa~i~~~~~-----~~~~~~---~~ 616 (803)
.+.+.+.++.+. ....+.++++|||+..++.+.+... + ..-+||.-|..|+++.. ..|..- ..
T Consensus 786 -~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~ 864 (1050)
T TIGR02468 786 -LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHS 864 (1050)
T ss_pred -HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHH
Confidence 233333333331 2345899999999999999988653 3 23478999999888621 112110 00
Q ss_pred CCCccH-HHHHHHHHHHHhhc--------CCCceEeecc----ceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCe-E
Q 003682 617 VPDFSW-KQIAEPVMKLYTET--------TDGSTIETKE----SALVWNFQYADPDFGSCQAKELLDHLESVLANEPV-S 682 (803)
Q Consensus 617 ~~~~~~-~~~~~~i~~~y~~~--------~~g~~ie~k~----~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~-~ 682 (803)
..+..| .+.+++.+..+... .++...+... +++++... ++... ...+++.+.|... .... .
T Consensus 865 hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~--d~~~~-~~v~elr~~Lr~~--gLr~~~ 939 (1050)
T TIGR02468 865 HIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVK--DPSKV-PPVKELRKLLRIQ--GLRCHA 939 (1050)
T ss_pred HHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEec--CcccC-ccHHHHHHHHHhC--CCceEE
Confidence 011234 22233333333221 1222333222 23333222 22211 1234455555422 2122 2
Q ss_pred EEE-CCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEE-EeCChh-hHH-HHHHc
Q 003682 683 VKS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLC-IGDDRS-DED-MFEVI 736 (803)
Q Consensus 683 v~~-g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla-~GD~~N-Di~-Mf~~a 736 (803)
+.+ +..+++|.|..+|||.||++|+.++ |++++++++ +||+.| |.+ |+...
T Consensus 940 iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~VfaGdSGntD~e~Ll~G~ 994 (1050)
T TIGR02468 940 VYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAVFVGESGDTDYEGLLGGL 994 (1050)
T ss_pred EeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEEEeccCCCCCHHHHhCCc
Confidence 333 4589999999999999999999999 999999955 999999 955 55433
No 13
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.98 E-value=1.1e-30 Score=275.05 Aligned_cols=234 Identities=20% Similarity=0.236 Sum_probs=185.7
Q ss_pred CeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCce
Q 003682 532 NRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGV 609 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~ 609 (803)
.++|++||||||++.. +.+..++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 5899999999999842 2356889999999999955689999999999999999999765 467899999999876544
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeE
Q 003682 610 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 689 (803)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~ 689 (803)
.+... ...++.+.+...++.+..++||+++|.++..+.+||+.++.. .....++.+.+.+.+. ...+.+++.+
T Consensus 93 ~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i~~~~~--~~~~~~g~~~ 165 (266)
T PRK10187 93 THIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRITQIWP--QLALQPGKCV 165 (266)
T ss_pred eeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHHHhhCC--ceEEeCCCEE
Confidence 33222 233444555555666778899999999999999999866321 1112223333332222 3667789999
Q ss_pred EEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCC
Q 003682 690 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDD 769 (803)
Q Consensus 690 vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~ 769 (803)
+||+|+++|||.|++++++++ |+..+++++|||+.||++||+.+... ..++|+||++.+.|+|++++
T Consensus 166 lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l~~ 232 (266)
T PRK10187 166 VEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRLAG 232 (266)
T ss_pred EEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeCCC
Confidence 999999999999999999999 99999999999999999999999431 12789999999999999999
Q ss_pred HhHHHHHHHHHHHhhcc
Q 003682 770 TAEILRMLLGLAEASAQ 786 (803)
Q Consensus 770 ~~ev~~~L~~l~~~~~~ 786 (803)
+++|..+|+.|+....+
T Consensus 233 ~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 233 VPDVWSWLEMITTAQQQ 249 (266)
T ss_pred HHHHHHHHHHHHHhhhc
Confidence 99999999999986663
No 14
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=99.98 E-value=5e-31 Score=270.82 Aligned_cols=248 Identities=31% Similarity=0.513 Sum_probs=211.5
Q ss_pred HHHHHHHHHhcCCeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEe
Q 003682 520 IDHIVSAYKRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAA 597 (803)
Q Consensus 520 ~~~~~~~y~~~~~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia 597 (803)
.....+.|...++++|++||||||.+.. +....++++++++|++|+.+.++.|+|+|||+...++.+++ ++++++++
T Consensus 6 ~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~a 84 (266)
T COG1877 6 SNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLIA 84 (266)
T ss_pred hhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEEE
Confidence 3445566788899999999999999854 34567889999999999999999999999999999999997 78999999
Q ss_pred cCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhc
Q 003682 598 EHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA 677 (803)
Q Consensus 598 ~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~ 677 (803)
+||++++...+..|..........|++.+.+++++|.+++||+++|.|+..+.|||++++++....++....... .
T Consensus 85 ehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~----~ 160 (266)
T COG1877 85 EHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL----I 160 (266)
T ss_pred ecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhc----c
Confidence 999999888777788776666778999999999999999999999999999999999997764433332222221 1
Q ss_pred CCC-eEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEe
Q 003682 678 NEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV 756 (803)
Q Consensus 678 ~~~-~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~v 756 (803)
+.. +.+..|+..||++|.++|||.+++++++.+ ....+++++.||+.+|++||++++.+ +.++|.+
T Consensus 161 ~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~----------~~~~v~v 227 (266)
T COG1877 161 NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKL----------DSITVKV 227 (266)
T ss_pred ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccC----------CCceEEe
Confidence 222 789999999999999999999999999987 44446899999999999999999874 2378999
Q ss_pred CCCCccceeEeCCHhHHHHHHHHHHHhhc
Q 003682 757 GQKPSKAKYYLDDTAEILRMLLGLAEASA 785 (803)
Q Consensus 757 G~~~s~A~~~v~~~~ev~~~L~~l~~~~~ 785 (803)
|...+.|++.+.........|.++.....
T Consensus 228 ~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 228 GVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred cCCcccccccccccHHHHHHHHHHHHHhh
Confidence 99999999999999999999999988776
No 15
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.97 E-value=3.3e-30 Score=268.96 Aligned_cols=237 Identities=29% Similarity=0.415 Sum_probs=192.5
Q ss_pred cCCeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCC
Q 003682 530 TKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNY 607 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~ 607 (803)
+++++|+|||||||++.. +....++++++++|++|++++++.|+|+|||+...+...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 357899999999999843 3446688999999999999999999999999988877655 3467899999999998644
Q ss_pred ce-eEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccC-CCccchhhHHHHHHHHHHHhcCCCeEEEE
Q 003682 608 GV-DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYA-DPDFGSCQAKELLDHLESVLANEPVSVKS 685 (803)
Q Consensus 608 ~~-~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~-d~~~~~~~~~el~~~l~~~l~~~~~~v~~ 685 (803)
.. .|... ......|++.+.++.+++.++ ||+++|.|+.+++|||+.+ +++.+..++.++...+. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 35432 222246888888888888877 9999999999999999998 67766666666665543 334678889
Q ss_pred CCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEe--CCCCccc
Q 003682 686 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV--GQKPSKA 763 (803)
Q Consensus 686 g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~v--G~~~s~A 763 (803)
++.++|++|.++|||.+++++++++ ++.++++++|||+.||++||+.+... + .....++|.| |..++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~-~-----~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQ-W-----GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhcc-c-----CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999999 88889999999999999999999321 0 0012367777 8888999
Q ss_pred eeEeCCHhHHHHHHHHHH
Q 003682 764 KYYLDDTAEILRMLLGLA 781 (803)
Q Consensus 764 ~~~v~~~~ev~~~L~~l~ 781 (803)
+|+++++++|.++|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999875
No 16
>PLN03017 trehalose-phosphatase
Probab=99.97 E-value=1.5e-29 Score=270.03 Aligned_cols=243 Identities=25% Similarity=0.339 Sum_probs=190.6
Q ss_pred HhcCCeEEEEecCCcCCCCCC-CC-CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEe
Q 003682 528 KRTKNRAILLDYDGTIMVPGS-IS-TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRP 605 (803)
Q Consensus 528 ~~~~~kli~~DlDGTLl~~~~-~~-~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~ 605 (803)
.+.+..+||+||||||++..+ .+ ..++++++++|++|+ +++.|+|+|||++..+.++++ +.+++++++||+.+..
T Consensus 107 ~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i~~ 183 (366)
T PLN03017 107 SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDIKG 183 (366)
T ss_pred hcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEEec
Confidence 345678999999999995432 23 379999999999995 579999999999999999864 4568899999999987
Q ss_pred CCceeEEe------ecCCCCccHHHHHHHH---HHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHh
Q 003682 606 NYGVDWET------CVSVPDFSWKQIAEPV---MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVL 676 (803)
Q Consensus 606 ~~~~~~~~------~~~~~~~~~~~~~~~i---~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l 676 (803)
+++..+.. ........|.+.+.++ +..+++++||+++|.|.++++|||+++++. ...++...+...+
T Consensus 184 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~~~vl 259 (366)
T PLN03017 184 PAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQVRSVL 259 (366)
T ss_pred CCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHHHHHH
Confidence 65421110 1111223466655555 556778899999999999999999998664 2356666677667
Q ss_pred cCCC-eEEEECCeEEEEEeC-CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEE
Q 003682 677 ANEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFAC 754 (803)
Q Consensus 677 ~~~~-~~v~~g~~~vEI~p~-gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v 754 (803)
.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...+.+++|||+.+|++||+.+... ...++|
T Consensus 260 ~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~---------~~G~gI 330 (366)
T PLN03017 260 KNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDR---------GEGFGI 330 (366)
T ss_pred HhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhc---------CCceEE
Confidence 6665 789999999999995 99999999999998822122245799999999999999999642 023899
Q ss_pred EeC--CCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 755 TVG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 755 ~vG--~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
.|| .+++.|+|+++++++|.++|++|+.....
T Consensus 331 ~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~ 364 (366)
T PLN03017 331 LVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM 364 (366)
T ss_pred EECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence 999 57899999999999999999999886543
No 17
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.97 E-value=8.5e-31 Score=272.06 Aligned_cols=227 Identities=38% Similarity=0.663 Sum_probs=153.5
Q ss_pred EEecCCcCCCCCC--CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEe
Q 003682 536 LLDYDGTIMVPGS--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET 613 (803)
Q Consensus 536 ~~DlDGTLl~~~~--~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~ 613 (803)
|+||||||.+..+ ....+++.++++|++||+++++.|+|+|||+...++.+ ..+++++++++||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~-~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF-GGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH--S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh-cCCCCceEEEEeeEEeccCccccccc
Confidence 6999999998542 44578899999999999999999999999999995444 46788999999999999999888876
Q ss_pred ecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC-CeEEEECCeEEEE
Q 003682 614 CVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANE-PVSVKSGPNIVEV 692 (803)
Q Consensus 614 ~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~-~~~v~~g~~~vEI 692 (803)
.....+..|++.+.++++.+.+++||+++|.|++++.|||++++++++..++.++.+.+.+.+... ++.+..|+.++||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 545556689999999999999999999999999999999999999988888999999988877665 7899999999999
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCC-----CCccceeEe
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-----KPSKAKYYL 767 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~-----~~s~A~~~v 767 (803)
+|.+++||.|+++|++.+...+-.+++++++||+.+|++||++++... ...+++.||. ++|.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999987222223789999999999999999997631 1125666664 569999999
Q ss_pred CCHh
Q 003682 768 DDTA 771 (803)
Q Consensus 768 ~~~~ 771 (803)
+++.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
No 18
>PLN02580 trehalose-phosphatase
Probab=99.97 E-value=3.6e-29 Score=269.72 Aligned_cols=243 Identities=25% Similarity=0.371 Sum_probs=187.0
Q ss_pred HHHHhcCCeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEE
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 602 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~ 602 (803)
.+|.+.+.+++|+||||||.+.. |....++++++++|++|++. ..|+|+|||+...+.++++. ..++++++||+.
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 36788889999999999998754 35667899999999999665 47999999999999999964 578999999999
Q ss_pred EEeCCc----eeEEee------------cCCCCccHHHHHHHHHHH---HhhcCCCceEeeccceEEEeeccCCCccchh
Q 003682 603 VRPNYG----VDWETC------------VSVPDFSWKQIAEPVMKL---YTETTDGSTIETKESALVWNFQYADPDFGSC 663 (803)
Q Consensus 603 i~~~~~----~~~~~~------------~~~~~~~~~~~~~~i~~~---y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~ 663 (803)
++.+.+ ..|... ......+|.+.+.++.+. +++++||+++|.|.++++|||+++++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 876421 112211 011134566555555444 5667899999999999999999997765433
Q ss_pred hHHHHHHHHHHHhcCCC-eEEEECCeEEEEEe-CCCCHHHHHHHHHHHhhhCCCCcc-c--EEEEeCChhhHHHHHHcch
Q 003682 664 QAKELLDHLESVLANEP-VSVKSGPNIVEVKP-QGVNKGLVAQHQLETMHQKGMLPD-F--VLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 664 ~~~el~~~l~~~l~~~~-~~v~~g~~~vEI~p-~gv~Kg~al~~ll~~l~~~gi~~d-~--vla~GD~~NDi~Mf~~ag~ 738 (803)
++.++ .+.+.+.+ +.+..|+.++||+| .++|||.|++++++++ +++.+ + +++|||+.||++||+.+..
T Consensus 269 ~~~~l----~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCV----HDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHH----HHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 33333 33333444 78889999999999 5999999999999998 87754 3 4899999999999998753
Q ss_pred hcCCCCCCCCcceEEEEeC--CCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 739 AAAGPSLSPVAEVFACTVG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 739 s~a~~~~~~~~~~~~v~vG--~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
.. ..++|.|| .+.+.|+|+++++++|.++|+.|+.....
T Consensus 342 ~~---------~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~~ 382 (384)
T PLN02580 342 GN---------RGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKKS 382 (384)
T ss_pred cC---------CceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhhc
Confidence 10 01456665 47899999999999999999999886543
No 19
>PLN02151 trehalose-phosphatase
Probab=99.97 E-value=8.2e-29 Score=263.73 Aligned_cols=243 Identities=23% Similarity=0.374 Sum_probs=191.0
Q ss_pred HhcCCeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEe
Q 003682 528 KRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRP 605 (803)
Q Consensus 528 ~~~~~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~ 605 (803)
.+.+..+||+||||||++.. +....++++++++|++|++ +..|+|+|||+...+.++++ +++++++++||+.++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 34567899999999999643 2455789999999999964 57999999999999999996 4578999999999986
Q ss_pred CC-ceeEEe----ecCCCCccHHHHHHHHHHHH---hhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhc
Q 003682 606 NY-GVDWET----CVSVPDFSWKQIAEPVMKLY---TETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA 677 (803)
Q Consensus 606 ~~-~~~~~~----~~~~~~~~~~~~~~~i~~~y---~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~ 677 (803)
++ +..|+. ........|.+.+.++++.+ +.++||+++|.|.++++|||+.++++ ...++.+.+.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 334531 11122446777777665554 47899999999999999999998664 23456666666666
Q ss_pred CCC-eEEEECCeEEEEEeC-CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEE
Q 003682 678 NEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 755 (803)
Q Consensus 678 ~~~-~~v~~g~~~vEI~p~-gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~ 755 (803)
+.+ +.+..|+.++||+|. ++|||.|+++|++.+...+...++++++||+.+|++||+.+.... ..+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKK---------QGLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcC---------CCccEE
Confidence 655 789999999999995 999999999999987222233457999999999999999986420 125677
Q ss_pred eC--CCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 756 VG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 756 vG--~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
|| .+.|.|+|+++++++|.++|+.|+.....
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~ 350 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEWKQL 350 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHhhhc
Confidence 76 67899999999999999999999986544
No 20
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.95 E-value=2.9e-27 Score=250.49 Aligned_cols=230 Identities=19% Similarity=0.210 Sum_probs=158.6
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCC-cEEecCcEEEEeCCc
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGL-GIAAEHGYFVRPNYG 608 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l-~lia~nGa~i~~~~~ 608 (803)
|++|+|++|+||||++ ++..++++++++|+++ +++|+.|+|+|||++..+.+++..+.-. +++++||++|...+.
T Consensus 1 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 76 (264)
T COG0561 1 MMIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGE 76 (264)
T ss_pred CCeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCc
Confidence 5789999999999999 7788999999999998 9999999999999999999999887433 699999999999855
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhc--CCCceEeeccceE------------EE-----eeccC---CC------cc
Q 003682 609 VDWETCVSVPDFSWKQIAEPVMKLYTET--TDGSTIETKESAL------------VW-----NFQYA---DP------DF 660 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~i~~~y~~~--~~g~~ie~k~~~~------------~~-----~~~~~---d~------~~ 660 (803)
..+...++ .+.+..+++..... ....+........ .. ..... .. ..
T Consensus 77 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
T COG0561 77 LLFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK 150 (264)
T ss_pred EEeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec
Confidence 54443322 23344444333221 1111111100000 00 00000 00 00
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCe-EEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 661 GSCQAKELLDHLESVLANEPVSVKSGPN-IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 661 ~~~~~~el~~~l~~~l~~~~~~v~~g~~-~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
......++.+.+.+.+......+.++.. ++||+|+|+|||.|++++++++ |+++++|+||||+.||++||+.+|++
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~g 227 (264)
T COG0561 151 DHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGLG 227 (264)
T ss_pred ChHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCee
Confidence 0122334444555555544455555544 4999999999999999999999 99999999999999999999999987
Q ss_pred cCCCCCCCCcceEEEEeCCCCccceeEe--CCHhHHHHHHHHHHH
Q 003682 740 AAGPSLSPVAEVFACTVGQKPSKAKYYL--DDTAEILRMLLGLAE 782 (803)
Q Consensus 740 ~a~~~~~~~~~~~~v~vG~~~s~A~~~v--~~~~ev~~~L~~l~~ 782 (803)
+||+|+++. .+..|+++. ++.++|.+.|+++..
T Consensus 228 vam~Na~~~----------~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 228 VAMGNADEE----------LKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred eeccCCCHH----------HHhhCCcccCCccchHHHHHHHHHhc
Confidence 655554321 245577654 577999999998754
No 21
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.95 E-value=2.8e-27 Score=251.51 Aligned_cols=229 Identities=18% Similarity=0.210 Sum_probs=153.6
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCC----CcEEecCcEEEEe
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG----LGIAAEHGYFVRP 605 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~----l~lia~nGa~i~~ 605 (803)
|++|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||++..+.++++.+.- .++++.||+.|+.
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~ 76 (270)
T PRK10513 1 MAIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQK 76 (270)
T ss_pred CceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEE
Confidence 4589999999999999 6788999999999998 999999999999999999998877631 2589999999986
Q ss_pred C--CceeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceEeeccce-----------EEEeec---cCCCc--
Q 003682 606 N--YGVDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKESA-----------LVWNFQ---YADPD-- 659 (803)
Q Consensus 606 ~--~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~--------~~g~~ie~k~~~-----------~~~~~~---~~d~~-- 659 (803)
. +...+...++. +.+..+++...+. ..+.+...+... ....+. ...+.
T Consensus 77 ~~~~~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (270)
T PRK10513 77 AADGETVAQTALSY------DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQ 150 (270)
T ss_pred CCCCCEEEecCCCH------HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCC
Confidence 3 43444443332 1222222221110 011111111000 000000 00000
Q ss_pred c------c-hhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHH
Q 003682 660 F------G-SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDM 732 (803)
Q Consensus 660 ~------~-~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~M 732 (803)
. . .....++.+.+.+.+......+.++..++||+|+|+|||+|++++++++ |++++++++|||+.||++|
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~M 227 (270)
T PRK10513 151 FPKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAM 227 (270)
T ss_pred ceEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHH
Confidence 0 0 0112233333433333323345667789999999999999999999999 9999999999999999999
Q ss_pred HHHcchhcCCCCCCCCcceEEEEeCCCCccceeEe--CCHhHHHHHHHHHH
Q 003682 733 FEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYL--DDTAEILRMLLGLA 781 (803)
Q Consensus 733 f~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v--~~~~ev~~~L~~l~ 781 (803)
|+.+|+++||+|+++. .+..|+|++ ++.++|.++|+++.
T Consensus 228 l~~ag~~vAm~NA~~~----------vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 228 IEYAGVGVAMGNAIPS----------VKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHhCCceEEecCccHH----------HHHhcCeeccCCCcchHHHHHHHHh
Confidence 9999987555444331 246688887 46788999998875
No 22
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.95 E-value=2.3e-27 Score=252.39 Aligned_cols=229 Identities=15% Similarity=0.175 Sum_probs=154.3
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC-Cc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-YG 608 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-~~ 608 (803)
|+|+|++||||||++ +++.++++++++|++| +++|+.|++||||++..+.+++..+. ..++++.||+.|++. +.
T Consensus 1 m~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 1 MARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred CccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 479999999999999 7788999999999998 99999999999999999999987763 346799999999863 33
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceEeeccc---------eEEEee---ccCC-Ccc-------
Q 003682 609 VDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKES---------ALVWNF---QYAD-PDF------- 660 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~i~~~y~~~--------~~g~~ie~k~~---------~~~~~~---~~~d-~~~------- 660 (803)
..+...++. +.+.++++..... ..+.+...... ...... .... ...
T Consensus 77 ~l~~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~ 150 (272)
T PRK15126 77 LLHRQDLPA------DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCG 150 (272)
T ss_pred EEEeecCCH------HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEEC
Confidence 344433322 2233333222111 00111100000 000000 0000 000
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhc
Q 003682 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 740 (803)
Q Consensus 661 ~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~ 740 (803)
......++.+.+.+.+......+.++..++||+|+++|||+|++++++++ |++++++++|||+.||++||+.+|.++
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~~v 227 (272)
T PRK15126 151 DHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGRGF 227 (272)
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCCce
Confidence 01122334444544444333344566789999999999999999999999 999999999999999999999999876
Q ss_pred CCCCCCCCcceEEEEeCCCCcccee--Ee--CCHhHHHHHHHHHHH
Q 003682 741 AGPSLSPVAEVFACTVGQKPSKAKY--YL--DDTAEILRMLLGLAE 782 (803)
Q Consensus 741 a~~~~~~~~~~~~v~vG~~~s~A~~--~v--~~~~ev~~~L~~l~~ 782 (803)
||+|+.+. .+..|++ ++ ++.++|.++|+++..
T Consensus 228 Am~Na~~~----------vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 228 IMGNAMPQ----------LRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred eccCChHH----------HHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 66554432 2355655 44 467899999999874
No 23
>PRK10976 putative hydrolase; Provisional
Probab=99.95 E-value=3.5e-27 Score=250.22 Aligned_cols=228 Identities=13% Similarity=0.117 Sum_probs=152.4
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC-Cc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-YG 608 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-~~ 608 (803)
|+|+|++|+||||++ +++.++++++++|+++ +++|+.|+|||||++..+.+++..+. ..++++.||+.|+.. +.
T Consensus 1 mikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 1 MYQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred CceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 379999999999999 6788999999999998 99999999999999999999887763 345799999999864 33
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhcC---------CCceEeeccc-----------eEEEe-eccCCC-cc------
Q 003682 609 VDWETCVSVPDFSWKQIAEPVMKLYTETT---------DGSTIETKES-----------ALVWN-FQYADP-DF------ 660 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~i~~~y~~~~---------~g~~ie~k~~-----------~~~~~-~~~~d~-~~------ 660 (803)
..+...++. +.+.++++...+.. .+.+...... ..... ...... ..
T Consensus 77 ~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~ 150 (266)
T PRK10976 77 LIFSHNLDR------DIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFT 150 (266)
T ss_pred EehhhcCCH------HHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEE
Confidence 333332221 23333333222110 0111110000 00000 000000 00
Q ss_pred --chhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 661 --GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 661 --~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
......++.+.+.+.+......+.++..++||+|+++|||+|++++++++ |+++++++||||+.||++||+.+|+
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~ 227 (266)
T PRK10976 151 CDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK 227 (266)
T ss_pred cCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC
Confidence 00112233344444443322344567789999999999999999999999 9999999999999999999999999
Q ss_pred hcCCCCCCCCcceEEEEeCCCCccce--eEe--CCHhHHHHHHHHHH
Q 003682 739 AAAGPSLSPVAEVFACTVGQKPSKAK--YYL--DDTAEILRMLLGLA 781 (803)
Q Consensus 739 s~a~~~~~~~~~~~~v~vG~~~s~A~--~~v--~~~~ev~~~L~~l~ 781 (803)
++||+|+++.. +..|+ +++ ++.++|.++|+++.
T Consensus 228 ~vAm~NA~~~v----------K~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 GCIMGNAHQRL----------KDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred CeeecCCcHHH----------HHhCCCCeecccCchHHHHHHHHHHh
Confidence 86666654322 34554 554 57789999999875
No 24
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.94 E-value=1.6e-25 Score=237.71 Aligned_cols=236 Identities=17% Similarity=0.135 Sum_probs=152.4
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC--CCcEEecCcEEEEeCCc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE--GLGIAAEHGYFVRPNYG 608 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~--~l~lia~nGa~i~~~~~ 608 (803)
.+++|++|+||||++ ++..+++.++++|++| +++|+.|++||||+...+.+++..+. ..++|++||+.|+.++.
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 479999999999999 6777899999999998 99999999999999999999988763 24689999999987643
Q ss_pred e-------eEEeecCCCCccHHHHHHHHHHHHhhcCCCce-Eeeccc-----eEE-Ee-----eccCCC---ccchhhHH
Q 003682 609 V-------DWETCVSVPDFSWKQIAEPVMKLYTETTDGST-IETKES-----ALV-WN-----FQYADP---DFGSCQAK 666 (803)
Q Consensus 609 ~-------~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~-ie~k~~-----~~~-~~-----~~~~d~---~~~~~~~~ 666 (803)
. .+...++ .+.+..+++...+...-.+ ...... ... .. ...... .+......
T Consensus 82 ~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGIS------HGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCCC------HHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 1111111 1223333332221100000 000000 000 00 000000 00000001
Q ss_pred HHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCC---CcccEEEEeCChhhHHHHHHcchhcCCC
Q 003682 667 ELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM---LPDFVLCIGDDRSDEDMFEVIKSAAAGP 743 (803)
Q Consensus 667 el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi---~~d~vla~GD~~NDi~Mf~~ag~s~a~~ 743 (803)
+....+.+.+....+.+..+..++||+|+++|||+|++++++++ |+ ++++++||||+.||++||+.+|.++||+
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 156 ERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred HHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 11222333332223445556679999999999999999999999 99 9999999999999999999999887777
Q ss_pred CCCCCcceEEEEeCCCCccceeEeC--CHhHHHHHHHHHHHh
Q 003682 744 SLSPVAEVFACTVGQKPSKAKYYLD--DTAEILRMLLGLAEA 783 (803)
Q Consensus 744 ~~~~~~~~~~v~vG~~~s~A~~~v~--~~~ev~~~L~~l~~~ 783 (803)
|+.+... ..-+.+..|.|+++ +.+++.+.|+.+..+
T Consensus 233 ~~~~~~~----~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 233 GLNREGV----HLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred CCCCCCc----ccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 6442110 11123456888875 567999999988764
No 25
>PLN02887 hydrolase family protein
Probab=99.94 E-value=1.3e-25 Score=256.56 Aligned_cols=230 Identities=17% Similarity=0.210 Sum_probs=153.3
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC---CC-------cEEec
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GL-------GIAAE 598 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~---~l-------~lia~ 598 (803)
++++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||++..+.+++..+. .. +.|+.
T Consensus 305 ~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~ 380 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFL 380 (580)
T ss_pred ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEee
Confidence 56789999999999999 7888999999999998 99999999999999999998887652 11 35567
Q ss_pred CcEEEEeC-CceeEEeecCCCCccHHHHHHHHHHHHhhcC--------CCceEeeccceEE-Ee--ec--------cCC-
Q 003682 599 HGYFVRPN-YGVDWETCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKESALV-WN--FQ--------YAD- 657 (803)
Q Consensus 599 nGa~i~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~--------~g~~ie~k~~~~~-~~--~~--------~~d- 657 (803)
||+.|++. +...+...++. +.+.++++...+.. .+.|......... .+ +. ...
T Consensus 381 NGA~I~d~~g~~I~~~~L~~------e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 454 (580)
T PLN02887 381 QGLLVYGRQGREIYRSNLDQ------EVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQ 454 (580)
T ss_pred cCeEEEECCCcEEEEEeCCH------HHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHH
Confidence 99999853 33344444332 23333333222110 0111100000000 00 00 000
Q ss_pred ----Ccc------ch--hhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeC
Q 003682 658 ----PDF------GS--CQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD 725 (803)
Q Consensus 658 ----~~~------~~--~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD 725 (803)
... .. ....++.+.+.+.+......+.++..++||+|+|+|||.|++++++++ |+++++|+||||
T Consensus 455 ~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eeviAFGD 531 (580)
T PLN02887 455 LLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEIMAIGD 531 (580)
T ss_pred hhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHEEEEec
Confidence 000 00 001223333444443333445677889999999999999999999999 999999999999
Q ss_pred ChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEe--CCHhHHHHHHHHHH
Q 003682 726 DRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYL--DDTAEILRMLLGLA 781 (803)
Q Consensus 726 ~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v--~~~~ev~~~L~~l~ 781 (803)
+.||++||+.+|+++||+|+.+. .+..|+|++ ++.++|.++|++++
T Consensus 532 s~NDIeMLe~AG~gVAMgNA~ee----------VK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 532 GENDIEMLQLASLGVALSNGAEK----------TKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred chhhHHHHHHCCCEEEeCCCCHH----------HHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 99999999999986555554331 246688877 46789999998864
No 26
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.94 E-value=1.7e-25 Score=232.01 Aligned_cols=223 Identities=20% Similarity=0.189 Sum_probs=147.9
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC--
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-- 606 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-- 606 (803)
|++|+|++|+||||++ +++.++++++++|++| +++|+.|+|||||+...+.+++..++ ..+++++||+.++..
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 1 MKIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFD 76 (230)
T ss_pred CceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCC
Confidence 4579999999999999 6778999999999998 89999999999999999998876663 346899999999876
Q ss_pred CceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceE-EEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEE
Q 003682 607 YGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESAL-VWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKS 685 (803)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~-~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~ 685 (803)
+...+...++ ...+.+....+.|... ...+....... ..... .... ....++.+.++. +. ..+.+..
T Consensus 77 ~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~l~~-~~-~~~~~~~ 144 (230)
T PRK01158 77 GKRIFLGDIE----ECEKAYSELKKRFPEA--STSLTKLDPDYRKTEVA-LRRT---VPVEEVRELLEE-LG-LDLEIVD 144 (230)
T ss_pred CCEEEEcchH----HHHHHHHHHHHhcccc--ceeeecCCcccccceee-eccc---ccHHHHHHHHHH-cC-CcEEEEe
Confidence 3333332221 1122222222222110 00000000000 00000 0000 011222223322 21 1244555
Q ss_pred CCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCcccee
Q 003682 686 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKY 765 (803)
Q Consensus 686 g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~ 765 (803)
+..++|+.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.++||+|+++. .+..|+|
T Consensus 145 ~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~----------vk~~a~~ 211 (230)
T PRK01158 145 SGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE----------LKEAADY 211 (230)
T ss_pred cceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCceEEecCccHH----------HHHhcce
Confidence 5678999999999999999999999 99999999999999999999999986555543321 2356888
Q ss_pred Ee--CCHhHHHHHHHHHH
Q 003682 766 YL--DDTAEILRMLLGLA 781 (803)
Q Consensus 766 ~v--~~~~ev~~~L~~l~ 781 (803)
++ ++.++|.+.|+++.
T Consensus 212 v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 212 VTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred EecCCCcChHHHHHHHHh
Confidence 77 46788999998764
No 27
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.93 E-value=4.5e-25 Score=245.79 Aligned_cols=301 Identities=17% Similarity=0.174 Sum_probs=207.0
Q ss_pred HHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHh
Q 003682 115 RSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL 194 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll 194 (803)
...+..|...++.++.++....++ |+||+|+++.+.++...+. .+.|+.+++|.++..+. + .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 446788988888887765444455 9999999998777666543 36789999999885431 0 01122233344
Q ss_pred cCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--
Q 003682 195 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-- 272 (803)
Q Consensus 195 ~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-- 272 (803)
.+|.+.+.+.++++.++ ..+ ++ ++|+|||+........++ .....+++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~~~~~---~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNRELSP---ADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccCCCCH---HHHHHHHHHhCC
Confidence 57777665533221110 111 23 789999975422111111 2233445555
Q ss_pred -CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003682 273 -KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 351 (803)
Q Consensus 273 -~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~ 351 (803)
.++++|+++||+++.||+..+++|++.+.+++|+++ |+++|.++..+ ++..++.+++.+ +.+ ...
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~~-~~~~~~~~~~~~---~~~------~~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATDD-PEGWIVYEEVLE---YAE------GDP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCCC-chhHHHHHHHHH---HhC------CCC
Confidence 478899999999999999999999999988878765 88888654221 222333222222 211 011
Q ss_pred cEEEecCC-CCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC
Q 003682 352 PVVLIDTP-LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS 430 (803)
Q Consensus 352 ~v~~~~~~-~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~ 430 (803)
.++++... ++.+++.++|++||+|++||.+||||++++||||| |.|+|+|+.+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-------------------G~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-------------------GKPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-------------------CCCEEEcCCCCchhhcc
Confidence 25555433 48999999999999999999999999999999999 67899999999998883
Q ss_pred ---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHHHHH
Q 003682 431 ---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 487 (803)
Q Consensus 431 ---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 487 (803)
+|+++++ .+++|++|.+++++ ++.+..+.+..++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~~--~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVDT--VEEAAVRILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeCC--cHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 3778764 67889999999985 455666666677765 569999999998887654
No 28
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.92 E-value=3.2e-24 Score=228.32 Aligned_cols=226 Identities=19% Similarity=0.234 Sum_probs=147.5
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC-C
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-Y 607 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-~ 607 (803)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||++..+.+.+..+. ..++++.||+.|++. +
T Consensus 1 M~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~ 76 (272)
T PRK10530 1 MTYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQA 76 (272)
T ss_pred CCccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCC
Confidence 4589999999999999 7788999999999998 99999999999999999999887763 346899999999864 2
Q ss_pred ce-eEEeecCCCCccHHHHHHHHHHHHhhcCC--------CceEeeccc----eEEE----------eeccCCC------
Q 003682 608 GV-DWETCVSVPDFSWKQIAEPVMKLYTETTD--------GSTIETKES----ALVW----------NFQYADP------ 658 (803)
Q Consensus 608 ~~-~~~~~~~~~~~~~~~~~~~i~~~y~~~~~--------g~~ie~k~~----~~~~----------~~~~~d~------ 658 (803)
+. .+...++. +.+.++++...+..- +.+...... ...+ .+...+.
T Consensus 77 ~~~l~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
T PRK10530 77 KKVLEADPLPV------QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAAR 150 (272)
T ss_pred CEEEEecCCCH------HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHh
Confidence 32 33333221 223333332222100 001100000 0000 0000000
Q ss_pred ----ccc--h-----hhHHHHHHHHHHHhcCCCe-EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCC
Q 003682 659 ----DFG--S-----CQAKELLDHLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD 726 (803)
Q Consensus 659 ----~~~--~-----~~~~el~~~l~~~l~~~~~-~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~ 726 (803)
... . ....++.+.+.+. ... ...++..++|++|++++||.|++++++++ |++++++++|||+
T Consensus 151 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~ 224 (272)
T PRK10530 151 QVNAIWKFALTHEDLPQLQHFAKHVEHE---LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDN 224 (272)
T ss_pred hcCCcEEEEEecCCHHHHHHHHHHHhhh---cCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCC
Confidence 000 0 0112222222222 222 23445678999999999999999999999 9999999999999
Q ss_pred hhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEe--CCHhHHHHHHHHHH
Q 003682 727 RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYL--DDTAEILRMLLGLA 781 (803)
Q Consensus 727 ~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v--~~~~ev~~~L~~l~ 781 (803)
.||++||+.+|.+++|+|+++ ..+..|+|++ ++.++|.++|+++.
T Consensus 225 ~NDi~m~~~ag~~vamgna~~----------~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 225 FNDISMLEAAGLGVAMGNADD----------AVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred hhhHHHHHhcCceEEecCchH----------HHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 999999999997544333211 0235688877 46788999998874
No 29
>PLN02939 transferase, transferring glycosyl groups
Probab=99.92 E-value=9.5e-24 Score=246.64 Aligned_cols=319 Identities=13% Similarity=0.132 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhh-----CCCCeEEEEEecC-----CCChhhhhc-CC-
Q 003682 118 WQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSP-----FPSSEIYRT-LP- 184 (803)
Q Consensus 118 w~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~-----~~~~~i~~flH~p-----fP~~~~~~~-lp- 184 (803)
..-|.-+.++.++.+.+. .+| |+|++||+|-.++|.++.+. +.++++.|++|-- ||...+..+ +|
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~ 667 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDV 667 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCH
Confidence 344555566666655443 456 99999999999985554432 3567899999943 222111111 12
Q ss_pred --------------CcHHHH-HHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCCh
Q 003682 185 --------------IRDELL-RALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHI 249 (803)
Q Consensus 185 --------------~~~~il-~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~ 249 (803)
.+-.++ .|+..||.|-.-++.|++.-+. ..--|++. ....+..++.++|+|||+
T Consensus 668 ~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~ 736 (977)
T PLN02939 668 HQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDT 736 (977)
T ss_pred HHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceeh
Confidence 111223 3677789888888888877554 11001110 112344577889999999
Q ss_pred hHHHHHhCC-------ch----HHHHHHHHHHHhC------CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEE
Q 003682 250 GQLQSVLNL-------PE----TEAKVAELQDQFK------GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIV 312 (803)
Q Consensus 250 ~~f~~~~~~-------~~----~~~~~~~l~~~~~------~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~ 312 (803)
+.|.+.... .. .......++++++ +.++|++|||+.+.||+..+++|+.++++ ++ +.
T Consensus 737 e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vq 810 (977)
T PLN02939 737 DTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQ 810 (977)
T ss_pred hhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CE
Confidence 998753210 00 0111344666662 35899999999999999999999998875 23 44
Q ss_pred EEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeee
Q 003682 313 LVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYI 392 (803)
Q Consensus 313 lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~ 392 (803)
|+++|.+ ++ ..+++++..++.+.+. .+.+.|.+.++......+|+.||+||+||.+||||++.+|||
T Consensus 811 LVIvGdG-----p~-~~~e~eL~~La~~l~l-------~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAM 877 (977)
T PLN02939 811 FVLLGSS-----PV-PHIQREFEGIADQFQS-------NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAM 877 (977)
T ss_pred EEEEeCC-----Cc-HHHHHHHHHHHHHcCC-------CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHH
Confidence 8888843 21 1345555666555321 233455567777777899999999999999999999999999
Q ss_pred eeecCCcccccccCCCCCCCCCceEEecccccccccCC------------CCceeCCCCHHHHHHHHHHHhC---CCHHH
Q 003682 393 ICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------------GAIRVNPWNIDAVAEAMDSALG---VSDAE 457 (803)
Q Consensus 393 a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~------------~~~lvnP~d~~~~a~ai~~aL~---~~~~e 457 (803)
+| |.|+|++..+|..+.+. +|++|+|.|+++++++|.+++. .+++.
T Consensus 878 Ay-------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~ 938 (977)
T PLN02939 878 RY-------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEV 938 (977)
T ss_pred HC-------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHH
Confidence 99 67899999999988762 4899999999999999999886 24444
Q ss_pred HHHHHHHhhcccccCCHHHHHHHHHHHHHHHH
Q 003682 458 KQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 458 r~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
+....++. ....+++...++++++...++.
T Consensus 939 ~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 939 WKQLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 44433322 2356899999999887666654
No 30
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.92 E-value=6.8e-24 Score=222.29 Aligned_cols=216 Identities=18% Similarity=0.305 Sum_probs=151.5
Q ss_pred EEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC-CceeEE
Q 003682 535 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-YGVDWE 612 (803)
Q Consensus 535 i~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-~~~~~~ 612 (803)
|++|+||||++ ++..++++++++|++| +++|+.+++||||++..+.+++..++ ..++|+.||+++... +...+.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 7788999999999998 88999999999999999999998764 358999999999443 333444
Q ss_pred eecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEE-------------------Eeec--c--CCCc-------cch
Q 003682 613 TCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALV-------------------WNFQ--Y--ADPD-------FGS 662 (803)
Q Consensus 613 ~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~-------------------~~~~--~--~d~~-------~~~ 662 (803)
..++ .+.+..+++......-...+...+.... .... . .... ...
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 3332 2333444443333211111111000000 0000 0 0000 012
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCC
Q 003682 663 CQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAG 742 (803)
Q Consensus 663 ~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~ 742 (803)
.....+.+.+.+.+.+....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.+|.+
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~~--- 224 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGYS--- 224 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSEE---
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCeE---
Confidence 345566677777776554677788999999999999999999999999 99999999999999999999999975
Q ss_pred CCCCCCcceEEEEeCCC----CccceeEeCC--HhHHHHHH
Q 003682 743 PSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRML 777 (803)
Q Consensus 743 ~~~~~~~~~~~v~vG~~----~s~A~~~v~~--~~ev~~~L 777 (803)
|+||++ +..|++++.+ .++|++.|
T Consensus 225 -----------~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 225 -----------VAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp -----------EEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred -----------EEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 455553 4678888742 36777664
No 31
>PLN02316 synthase/transferase
Probab=99.92 E-value=1.3e-23 Score=250.22 Aligned_cols=308 Identities=14% Similarity=0.119 Sum_probs=214.7
Q ss_pred hHHHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhh-----CCCCeEEEEEecCCCChhhhhcCCCcHHHH
Q 003682 117 LWQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSPFPSSEIYRTLPIRDELL 190 (803)
Q Consensus 117 ~w~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~-----~~~~~i~~flH~pfP~~~~~~~lp~~~~il 190 (803)
...-|..+++..++.+.+. .+| |+|++||+|-.++|.++++. .+++|+.+++|-. + | ....+-
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl----~-~----~~n~lk 756 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNL----E-F----GANHIG 756 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCc----c-c----chhHHH
Confidence 3445556666666655432 355 99999999999999999874 3568999999932 1 1 112244
Q ss_pred HHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhC-------Cch---
Q 003682 191 RALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLN-------LPE--- 260 (803)
Q Consensus 191 ~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~-------~~~--- 260 (803)
.++..+|.|---++.|++..... +. + ..+..++.++|+|||++.|.+... +.+
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~~-----~~----------l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSGN-----SA----------I--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHhc-----cC----------c--ccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 56778999988888887665531 00 0 112346778999999998764311 000
Q ss_pred --HHHHHHHHHHHhC----CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHH
Q 003682 261 --TEAKVAELQDQFK----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSET 334 (803)
Q Consensus 261 --~~~~~~~l~~~~~----~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v 334 (803)
.......++++++ +.++|++||||.+.||+..+++|+.++++. + +.||++|.+ ++ ..++.++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~G-----pd-~~~e~~l 887 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSA-----PD-PRIQNDF 887 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCC-----CC-HHHHHHH
Confidence 0112334666662 578999999999999999999999998863 2 347777743 22 2356667
Q ss_pred HHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCC
Q 003682 335 HATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKS 414 (803)
Q Consensus 335 ~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~ 414 (803)
.+++.++...+. ..+.|.+..+......+|++||+||+||.+|||||+.+|||+| |
T Consensus 888 ~~La~~Lg~~~~-----~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-------------------G 943 (1036)
T PLN02316 888 VNLANQLHSSHH-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-------------------G 943 (1036)
T ss_pred HHHHHHhCccCC-----CeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-------------------C
Confidence 777776553332 2233444455444458999999999999999999999999999 6
Q ss_pred ceEEecccccccccC-C---------------CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHH
Q 003682 415 SMLVVSEFVGCSPSL-S---------------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYW 477 (803)
Q Consensus 415 g~vV~S~~~G~~~~l-~---------------~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W 477 (803)
.|+|++..+|..+.+ + +|++|+|.|+++++++|.++|......+....+..++.+ ..+++..-
T Consensus 944 tppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~ 1023 (1036)
T PLN02316 944 SIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRP 1023 (1036)
T ss_pred CCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHH
Confidence 689999999999987 2 389999999999999999999864333333233333333 45899999
Q ss_pred HHHHHHHHHHH
Q 003682 478 ARSFLQDLERA 488 (803)
Q Consensus 478 ~~~~l~~l~~~ 488 (803)
++++++...++
T Consensus 1024 A~~Y~~LY~~a 1034 (1036)
T PLN02316 1024 ALDYMELYHSA 1034 (1036)
T ss_pred HHHHHHHHHHH
Confidence 98888766654
No 32
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.92 E-value=2.1e-23 Score=232.72 Aligned_cols=269 Identities=18% Similarity=0.268 Sum_probs=197.0
Q ss_pred CCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhC
Q 003682 140 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLG 219 (803)
Q Consensus 140 ~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~ 219 (803)
.|+|++|+.. .+...++++.|++++.+.+|-.|.. +.++ .++.+-..+. +.+.++.. ..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~~-------------~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELLD-------------KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHhc-------------cCCEEEEcCH-HHHHHHHh---hC-
Confidence 4999999733 4456677888999999999976532 2211 3566666554 44444321 11
Q ss_pred ceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCHHHHHHH
Q 003682 220 VSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLA 296 (803)
Q Consensus 220 ~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi~~~l~A 296 (803)
...++.++|+|+|.+.|.+. .. ..+++.+ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~~---~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----PQ---PNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----ch---HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 01245778999998877531 11 1233333 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccce
Q 003682 297 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCL 376 (803)
Q Consensus 297 ~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v 376 (803)
+.++.+++|+++ |+++|.+......+..++.+++.+++.+++. .+.+.|.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~---------~v~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD---------RCIMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC---------cEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999999998765 9989866533222334566667666655431 235677899999999999999999
Q ss_pred eccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCc-eeCCCCHHHHHHHHHHHh
Q 003682 377 VTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAI-RVNPWNIDAVAEAMDSAL 451 (803)
Q Consensus 377 ~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~-lvnP~d~~~~a~ai~~aL 451 (803)
+||. .||||++++||||| |.|+|+|..+|..+.+. .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~-------------------G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAA-------------------GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHc-------------------CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 49999999999999 67899999999988873 366 678999999999999999
Q ss_pred CCCHHHHHHHHHHhhcc-cccCCHHHHHHHHHHHHHH
Q 003682 452 GVSDAEKQMRHEKHYRY-VSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 452 ~~~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 487 (803)
+++.. ..+.+..+++ ..++++...++++++.++.
T Consensus 343 ~d~~~--~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPEL--TQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHHH--HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 87643 3445555554 4668999999999888865
No 33
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.92 E-value=3.3e-24 Score=218.03 Aligned_cols=196 Identities=26% Similarity=0.326 Sum_probs=147.0
Q ss_pred EEEEecCCcCCCCCCCC-CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEE
Q 003682 534 AILLDYDGTIMVPGSIS-TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWE 612 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~-~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~ 612 (803)
+|++|+||||++ .+ ..++++++++|++| ++.|+.|+++|||+...+..+++.+ +.+++++||+.++.+++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 45 68999999999999 7778999999999999999999775 578999999999987776666
Q ss_pred eecCCCC-ccHH---HHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhc-CCCeEEE-EC
Q 003682 613 TCVSVPD-FSWK---QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA-NEPVSVK-SG 686 (803)
Q Consensus 613 ~~~~~~~-~~~~---~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~-~~~~~v~-~g 686 (803)
. +... ..+. +.+...+..+....++...+.+...+.+++.... .......++.+.+..... ...+.+. ++
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 151 (204)
T TIGR01484 76 E--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAE--LGQELDSKMRERLEKIGRNDLELEAIYVG 151 (204)
T ss_pred c--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccc--hhhHHHHHHHHHHHhhccccCcEEEEEec
Confidence 4 1111 1121 1122233344445667777778888888887541 111122333444433321 1335565 69
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcC
Q 003682 687 PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741 (803)
Q Consensus 687 ~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a 741 (803)
..++||+|++++|+.+++++++++ +++++++++|||+.||++||+.++.++|
T Consensus 152 ~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 152 KTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 999999999999999999999999 9999999999999999999999998644
No 34
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.92 E-value=1e-23 Score=239.78 Aligned_cols=315 Identities=17% Similarity=0.157 Sum_probs=197.7
Q ss_pred hHHHHHHHHHHHHHHHHhhc-CCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChh--hhh------------
Q 003682 117 LWQAYVSVNKIFADKVMEVI-SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYR------------ 181 (803)
Q Consensus 117 ~w~~Y~~vN~~fa~~i~~~~-~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~--~~~------------ 181 (803)
.|.....+...+.+.+.+.. +| |+|++|+++..++..++++.. +.|+.++.|....... +..
T Consensus 93 ~~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~ 169 (439)
T TIGR02472 93 LWPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQY 169 (439)
T ss_pred hhhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhc
Confidence 34444555555555454332 45 999999987666666666544 5789999996432211 000
Q ss_pred cCCCcHH-HHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCch
Q 003682 182 TLPIRDE-LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPE 260 (803)
Q Consensus 182 ~lp~~~~-il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~ 260 (803)
.+..+-. ....+-.+|.|-..+...++.-+. .. ..-...++.++|+|||++.|.+....+.
T Consensus 170 ~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~---------------~~~~~~ki~vIpnGvd~~~f~~~~~~~~ 231 (439)
T TIGR02472 170 NISRRIEAEEETLAHASLVITSTHQEIEEQYA---LY---------------DSYQPERMQVIPPGVDLSRFYPPQSSEE 231 (439)
T ss_pred chHHHHHHHHHHHHhCCEEEECCHHHHHHHHH---hc---------------cCCCccceEEECCCcChhhcCCCCcccc
Confidence 0000000 011233455444333322111110 00 0112346788999999999875322111
Q ss_pred HHHHHHHHHHHh---CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHH----HHHHH
Q 003682 261 TEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQ----EVQSE 333 (803)
Q Consensus 261 ~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~----~l~~~ 333 (803)
.. ..+..+..+ +++++|++|||+++.||+..+|+||+++.+..+.. ++++ ++|.+. +.+.++ ++.++
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~ 305 (439)
T TIGR02472 232 TS-EIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQK 305 (439)
T ss_pred ch-hHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHH
Confidence 11 122222222 46789999999999999999999998642211111 2322 344321 111111 22233
Q ss_pred HHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc----ccceecccccCCCCCceeeeeeecCCcccccccCCCC
Q 003682 334 THATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA----ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDP 409 (803)
Q Consensus 334 v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~A----dv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~ 409 (803)
+..++.+ .+....+.|.|.++.+++.++|+.| |+||+||.+||||++++|||||
T Consensus 306 ~~~~~~~-------~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~--------------- 363 (439)
T TIGR02472 306 VLLLIDR-------YDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC--------------- 363 (439)
T ss_pred HHHHHHH-------cCCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh---------------
Confidence 3444444 3344556788889999999999988 9999999999999999999999
Q ss_pred CCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHHH
Q 003682 410 STAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDL 485 (803)
Q Consensus 410 ~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 485 (803)
|.|+|+|+.+|+.+.+. +|++|+|.|++++|++|.++++. ++++....+..++++ ..+++..-++++++-|
T Consensus 364 ----G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 364 ----GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ----CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 67899999999998883 48999999999999999999984 455566666666665 4589888888887654
No 35
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.91 E-value=2.1e-23 Score=238.73 Aligned_cols=297 Identities=20% Similarity=0.208 Sum_probs=193.5
Q ss_pred CCCCCeEEEeCccccchHHHHHhhC----CCCeEEEEEecCCCC----hhhhhcC--CC-------------cHHHHHHH
Q 003682 137 SPDDDFVWVHDYHLMVLPTFLRKRF----NRVKLGFFLHSPFPS----SEIYRTL--PI-------------RDELLRAL 193 (803)
Q Consensus 137 ~~~~d~iwihDyhl~llp~~lr~~~----~~~~i~~flH~pfP~----~~~~~~l--p~-------------~~~il~~l 193 (803)
+| |+|++||+|--++|.++++.. .+.|+.++.|..-.. .+.+..+ |. ..-+..++
T Consensus 118 ~p--DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (466)
T PRK00654 118 RP--DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGL 195 (466)
T ss_pred CC--ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHH
Confidence 45 999999999999999998653 468999999965210 1111111 10 01112244
Q ss_pred hcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCC-------c----hHH
Q 003682 194 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL-------P----ETE 262 (803)
Q Consensus 194 l~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~-------~----~~~ 262 (803)
..+|.|--.++.+.+..... ..| .|. .-.+..+..++.++|+|||.+.|.+.... + ...
T Consensus 196 ~~ad~vitvS~~~~~ei~~~---~~~------~gl-~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~ 265 (466)
T PRK00654 196 YYADRVTTVSPTYAREITTP---EFG------YGL-EGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKA 265 (466)
T ss_pred HhcCcCeeeCHHHHHHhccc---cCC------cCh-HHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchH
Confidence 55555555455444332210 000 000 00001123468899999999988653210 0 011
Q ss_pred HHHHHHHHHhC----CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHH
Q 003682 263 AKVAELQDQFK----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATV 338 (803)
Q Consensus 263 ~~~~~l~~~~~----~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv 338 (803)
...+.++++++ +.++|++|||+++.||+..+++|+++++++ + +.|+++|.+. + .+.+++++++
T Consensus 266 ~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g~----~---~~~~~l~~l~ 332 (466)
T PRK00654 266 ENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTGD----P---ELEEAFRALA 332 (466)
T ss_pred HHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecCc----H---HHHHHHHHHH
Confidence 12334566652 568999999999999999999999998764 2 4488777432 1 2445555555
Q ss_pred HHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEE
Q 003682 339 RRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLV 418 (803)
Q Consensus 339 ~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV 418 (803)
.+.+. .++++.+. +.+....+|+.||+||+||.+||||++.+|||+| |.|+|
T Consensus 333 ~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-------------------G~p~V 384 (466)
T PRK00654 333 ARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-------------------GTLPI 384 (466)
T ss_pred HHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-------------------CCCEE
Confidence 54321 24455554 5666789999999999999999999999999999 67899
Q ss_pred ecccccccccC-C--------CCceeCCCCHHHHHHHHHHHhCC--CHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHH
Q 003682 419 VSEFVGCSPSL-S--------GAIRVNPWNIDAVAEAMDSALGV--SDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 419 ~S~~~G~~~~l-~--------~~~lvnP~d~~~~a~ai~~aL~~--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 487 (803)
+|+.+|..+.+ + +|++|+|.|+++++++|.+++.. .++.+....++.. ...+++..-++++++...+
T Consensus 385 ~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 385 VRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRR 462 (466)
T ss_pred EeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHH
Confidence 99999999988 2 38999999999999999999863 2233333333222 2568888888888776655
Q ss_pred H
Q 003682 488 A 488 (803)
Q Consensus 488 ~ 488 (803)
+
T Consensus 463 ~ 463 (466)
T PRK00654 463 L 463 (466)
T ss_pred H
Confidence 4
No 36
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.91 E-value=1.2e-23 Score=221.82 Aligned_cols=220 Identities=19% Similarity=0.257 Sum_probs=143.7
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCC-ceeE
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY-GVDW 611 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~-~~~~ 611 (803)
+|++||||||++ .++.++++++++|++| ++.|+.|++||||++..+.+.+..+. ..++++.||+.|...+ ...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 6778999999999998 88899999999999999999988764 3478999999998764 3344
Q ss_pred EeecCCCCccHHHHHHHHHHHHhhcC--------CCceEeeccce-EEEe----ec------cC----CCcc-------c
Q 003682 612 ETCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKESA-LVWN----FQ------YA----DPDF-------G 661 (803)
Q Consensus 612 ~~~~~~~~~~~~~~~~~i~~~y~~~~--------~g~~ie~k~~~-~~~~----~~------~~----d~~~-------~ 661 (803)
...++. +.+.++++.+.+.. .+.++...... +... +. .. .... .
T Consensus 77 ~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLDL------DLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCCH------HHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 433332 23333333332211 11111110000 0000 00 00 0000 0
Q ss_pred hhhHHHHHHHHHH-HhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhc
Q 003682 662 SCQAKELLDHLES-VLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 740 (803)
Q Consensus 662 ~~~~~el~~~l~~-~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~ 740 (803)
.....++.+.+.+ .+......+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.+|.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~~~ 227 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGYGV 227 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCcee
Confidence 0112233333331 222222345677889999999999999999999999 999999999999999999999999865
Q ss_pred CCCCCCCCcceEEEEeCCCCccceeEeC--CHhHHHHH
Q 003682 741 AGPSLSPVAEVFACTVGQKPSKAKYYLD--DTAEILRM 776 (803)
Q Consensus 741 a~~~~~~~~~~~~v~vG~~~s~A~~~v~--~~~ev~~~ 776 (803)
+|+|+++. .+..|+|++. +.++|.++
T Consensus 228 a~~na~~~----------~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 228 AMGNADEE----------LKALADYVTDSNNEDGVALA 255 (256)
T ss_pred EecCchHH----------HHHhCCEEecCCCCcchhhh
Confidence 44432211 2356788764 45667654
No 37
>PRK14098 glycogen synthase; Provisional
Probab=99.91 E-value=4e-23 Score=236.38 Aligned_cols=319 Identities=14% Similarity=0.143 Sum_probs=211.8
Q ss_pred HhHHHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhhC------CCCeEEEEEecCC-----CChhhhhcC
Q 003682 116 SLWQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRF------NRVKLGFFLHSPF-----PSSEIYRTL 183 (803)
Q Consensus 116 ~~w~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~~------~~~~i~~flH~pf-----P~~~~~~~l 183 (803)
+...-|.-.++..++.+.+. ++| |+|++||+|-.++|.+++++. .++|+.++.|... |....-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34556777777777766542 456 999999999999999998753 4789999999642 211111112
Q ss_pred CCc------------HHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhH
Q 003682 184 PIR------------DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQ 251 (803)
Q Consensus 184 p~~------------~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~ 251 (803)
|.. .-+-.++..||.|---++.|++.-.+....-.|++ +. ...+..++.++|+|||++.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~-----~~----l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD-----KV----LEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH-----HH----HHhcCCCeeEEeCCccccc
Confidence 211 11223566677776666666654332000000110 00 0113457788999999998
Q ss_pred HHHHhCCc--------h---HHHHHHHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003682 252 LQSVLNLP--------E---TEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 315 (803)
Q Consensus 252 f~~~~~~~--------~---~~~~~~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 315 (803)
|.+..... . .......+++.+ +++++|++|||+.+.||+..+++|++++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 87532110 0 001122344444 2568999999999999999999999998753 3 45888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeee
Q 003682 316 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 316 i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~ 395 (803)
+|.+ +. .+++++++++.+.. ..+.+.+.++.+++..+|+.||+||+||..||||++.+|||+|
T Consensus 342 vG~G-----~~--~~~~~l~~l~~~~~---------~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~- 404 (489)
T PRK14098 342 CGSG-----DK--EYEKRFQDFAEEHP---------EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY- 404 (489)
T ss_pred EeCC-----CH--HHHHHHHHHHHHCC---------CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC-
Confidence 8842 21 24455555555421 1234556788999999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCceEEecccccccccCC-------CCceeCCCCHHHHHHHHHHHhCC--CHHHHHHHHHHhh
Q 003682 396 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-------GAIRVNPWNIDAVAEAMDSALGV--SDAEKQMRHEKHY 466 (803)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-------~~~lvnP~d~~~~a~ai~~aL~~--~~~er~~r~~~~~ 466 (803)
|.|+|++..+|..+.+. +|++|+|.|+++++++|.+++.+ .++.+....++.
T Consensus 405 ------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~- 465 (489)
T PRK14098 405 ------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA- 465 (489)
T ss_pred ------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH-
Confidence 66899999999988772 48999999999999999998742 233322222222
Q ss_pred cccccCCHHHHHHHHHHHHHHH
Q 003682 467 RYVSTHDVAYWARSFLQDLERA 488 (803)
Q Consensus 467 ~~v~~~~~~~W~~~~l~~l~~~ 488 (803)
....+++..-++++++-.+++
T Consensus 466 -~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 -MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred -hcCCCChHHHHHHHHHHHHHH
Confidence 235688888888887766553
No 38
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.91 E-value=1.4e-23 Score=216.82 Aligned_cols=214 Identities=21% Similarity=0.189 Sum_probs=141.1
Q ss_pred EEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCc--eeE
Q 003682 535 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG--VDW 611 (803)
Q Consensus 535 i~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~--~~~ 611 (803)
|++|+||||++ ++..++++++++|++| +++|+.|++||||++..+.+++..+. ..+++++||+.|+..+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999999 6788999999999998 99999999999999999998887764 45789999999988653 344
Q ss_pred EeecCCCCccHHHHH-HHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEE
Q 003682 612 ETCVSVPDFSWKQIA-EPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIV 690 (803)
Q Consensus 612 ~~~~~~~~~~~~~~~-~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~v 690 (803)
...++ ..|.... ......+.. ....+. . ...........+ .....++. +.+.. ...+.++..++
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~----~~~~~~~~----~~~~~-~~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSR-LKVQYP-R-RASLVKMRYGID----VDTVREII----KELGL-NLVAVDSGFDI 141 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhh-hccccc-c-ccceEEEeecCC----HHHHHHHH----HhcCc-eEEEecCCcEE
Confidence 43322 1222111 111000000 000000 0 000000000001 11122222 22221 12233566799
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeC--
Q 003682 691 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLD-- 768 (803)
Q Consensus 691 EI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~-- 768 (803)
||+|++++||.|++++++++ |++++++++|||+.||++||+.+|.++||+|+.+. .+..|+|++.
T Consensus 142 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~----------~k~~A~~vt~~~ 208 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPE----------LKEWADYVTESP 208 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHH----------HHHhcCeecCCC
Confidence 99999999999999999999 99999999999999999999999986555443321 2466888764
Q ss_pred CHhH----HHHHHHHH
Q 003682 769 DTAE----ILRMLLGL 780 (803)
Q Consensus 769 ~~~e----v~~~L~~l 780 (803)
+.++ |.+.|+++
T Consensus 209 ~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 209 YGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCcHHHHHHHHHHhh
Confidence 5567 88887764
No 39
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.90 E-value=3.9e-23 Score=211.94 Aligned_cols=211 Identities=18% Similarity=0.198 Sum_probs=139.4
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCC-CcEEecCcEEEEeCCcee
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG-LGIAAEHGYFVRPNYGVD 610 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~-l~lia~nGa~i~~~~~~~ 610 (803)
+|+|++|+||||++ .++.+++.+.++|++| +++|+.|++||||++..+.+++..++. .+++++||++|+..+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 48999999999998 7788999999999999 889999999999999999998877643 368999999999865432
Q ss_pred EEeecCCCCccHH-HHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeE
Q 003682 611 WETCVSVPDFSWK-QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 689 (803)
Q Consensus 611 ~~~~~~~~~~~~~-~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~ 689 (803)
.. ... ...+. ...... .+....-.. ........+.. . . .....+.+.+ ......+..+..+
T Consensus 77 ~~--~~~-~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~--~-~----~~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FL--ANM-EEEWFLDEEKKK--RFPRDRLSN--EYPRASLVIMR--E-G----KDVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EE--ecc-cchhhHHHhhhh--hhhhhhccc--ccceeEEEEec--C-C----ccHHHHHHHH----HhCCeEEEecCce
Confidence 11 111 11111 100000 010000000 00000011110 0 0 0112222233 2233444555678
Q ss_pred EEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeC-
Q 003682 690 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLD- 768 (803)
Q Consensus 690 vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~- 768 (803)
+||+|.+++||.+++++++++ |++++++++|||+.||++||+.+|.+++|+|+.+. .+..|+|++.
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~----------~k~~A~~v~~~ 205 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQ----------LKEIADYVTSN 205 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHH----------HHHhCCEEcCC
Confidence 999999999999999999999 99999999999999999999999986555443221 2456788774
Q ss_pred -CHhHHHHHH
Q 003682 769 -DTAEILRML 777 (803)
Q Consensus 769 -~~~ev~~~L 777 (803)
+.++|.++|
T Consensus 206 ~~~~Gv~~~l 215 (215)
T TIGR01487 206 PYGEGVVEVL 215 (215)
T ss_pred CCCchhhhhC
Confidence 556666543
No 40
>PRK14099 glycogen synthase; Provisional
Probab=99.90 E-value=9.7e-23 Score=232.97 Aligned_cols=297 Identities=19% Similarity=0.190 Sum_probs=190.2
Q ss_pred cCCCCCeEEEeCccccchHHHHHhh-CCCCeEEEEEecC-----CCChhhhhc--CCCc-------------HHHHHHHh
Q 003682 136 ISPDDDFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSP-----FPSSEIYRT--LPIR-------------DELLRALL 194 (803)
Q Consensus 136 ~~~~~d~iwihDyhl~llp~~lr~~-~~~~~i~~flH~p-----fP~~~~~~~--lp~~-------------~~il~~ll 194 (803)
++| |+|++||+|-.++|.+++.. ..++|+.++.|-. ||. ..+.. +|.. .-+-.++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 566 99999999999999999753 3467899999953 221 11111 1110 01223344
Q ss_pred cCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCc-------h----HHH
Q 003682 195 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLP-------E----TEA 263 (803)
Q Consensus 195 ~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~-------~----~~~ 263 (803)
.+|.|---++.+++...+... -.|++ + ....+..++.++|+|||++.|.+..... + ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~-g~gl~-----~----~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEA-GMGLD-----G----LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhcccC-CcChH-----H----HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 455544444444433221000 00000 0 0011234788999999999987532110 0 001
Q ss_pred HHHHHHHHhC-----CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHH
Q 003682 264 KVAELQDQFK-----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATV 338 (803)
Q Consensus 264 ~~~~l~~~~~-----~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv 338 (803)
....++++++ +.++|++|||+++.||+..+++|+++++++ + +.|+++|.+. + ++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~G~----~---~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGSGD----A---ELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEecCC----H---HHHHHHHHHH
Confidence 1234555552 357888999999999999999999998753 2 4488887421 1 2444555554
Q ss_pred HHHhcccCCCCcccEEEecCCCCHHHHHHHH-HhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceE
Q 003682 339 RRINKIFGRPGYQPVVLIDTPLQFYERIAYY-VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSML 417 (803)
Q Consensus 339 ~~in~~~~~~~~~~v~~~~~~~~~~~l~aly-~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~v 417 (803)
.+. + ..++++.|. .+++..+| +.||+||+||.+||||++.+|||+| |+|+
T Consensus 346 ~~~----~----~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~-------------------G~pp 396 (485)
T PRK14099 346 QAY----P----GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY-------------------GAVP 396 (485)
T ss_pred HHC----C----CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC-------------------CCCc
Confidence 432 1 124456665 67888877 5699999999999999999999999 5678
Q ss_pred EecccccccccC-C-----------CCceeCCCCHHHHHHHHHHHhC--CCHHHHHHHHHHhhcccccCCHHHHHHHHHH
Q 003682 418 VVSEFVGCSPSL-S-----------GAIRVNPWNIDAVAEAMDSALG--VSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 418 V~S~~~G~~~~l-~-----------~~~lvnP~d~~~~a~ai~~aL~--~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 483 (803)
|+|..+|..+.+ + +|++|+|.|+++++++|.+++. .+++.+....++.+ ...+++..-++++++
T Consensus 397 Vvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~ 474 (485)
T PRK14099 397 VVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAA 474 (485)
T ss_pred EEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHH
Confidence 889999998877 2 4899999999999999998532 23444433333332 356898988988887
Q ss_pred HHHHHH
Q 003682 484 DLERAC 489 (803)
Q Consensus 484 ~l~~~~ 489 (803)
..+++.
T Consensus 475 lY~~l~ 480 (485)
T PRK14099 475 LYRSLV 480 (485)
T ss_pred HHHHHH
Confidence 766654
No 41
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.90 E-value=8.7e-23 Score=229.31 Aligned_cols=271 Identities=16% Similarity=0.122 Sum_probs=196.6
Q ss_pred CeEEEeCccccchHHHHHhh-CCCCeEEEEEecCCCChhhhhc--CC-CcHHHHHHHhcCCEEeccCHhhHHHHHHHHHH
Q 003682 141 DFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSPFPSSEIYRT--LP-IRDELLRALLNADLIGFHTFDYARHFLSCCSR 216 (803)
Q Consensus 141 d~iwihDyhl~llp~~lr~~-~~~~~i~~flH~pfP~~~~~~~--lp-~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~ 216 (803)
|+|+.|..+.-.+..++++. ....++.+++|-+ +++.. .. .+..+-..+-.+|.+-..+....+.+..
T Consensus 120 diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~----d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 120 DVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGI----DISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccc----ccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 99999987766667777663 2244667788843 22211 01 1112223344688877666543333321
Q ss_pred HhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHH
Q 003682 217 MLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLA 296 (803)
Q Consensus 217 ~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A 296 (803)
.|. ...++.++|+|||++.|..... ....+...|++|||+.+.||+..+++|
T Consensus 192 -~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a 243 (406)
T PRK15427 192 -MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEA 243 (406)
T ss_pred -cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHH
Confidence 121 1235677999999998853110 011345679999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccce
Q 003682 297 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCL 376 (803)
Q Consensus 297 ~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v 376 (803)
++.+.+++|+++ |+++|. ++..++++ +++.+ .+..+.+.|.|.++++++..+|+.||+||
T Consensus 244 ~~~l~~~~~~~~----l~ivG~-----G~~~~~l~----~~~~~-------~~l~~~V~~~G~~~~~el~~~l~~aDv~v 303 (406)
T PRK15427 244 CRQLKEQGVAFR----YRILGI-----GPWERRLR----TLIEQ-------YQLEDVVEMPGFKPSHEVKAMLDDADVFL 303 (406)
T ss_pred HHHHHhhCCCEE----EEEEEC-----chhHHHHH----HHHHH-------cCCCCeEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999988887655 888883 34333444 44444 33445778889999999999999999999
Q ss_pred ecccc------cCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHH
Q 003682 377 VTAVR------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 377 ~~S~~------EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai 447 (803)
+||.. ||||++++||||| |.|||+|+.+|+.+.+. +|++|+|.|++++|++|
T Consensus 304 ~pS~~~~~g~~Eg~p~~llEAma~-------------------G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai 364 (406)
T PRK15427 304 LPSVTGADGDMEGIPVALMEAMAV-------------------GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRL 364 (406)
T ss_pred ECCccCCCCCccCccHHHHHHHhC-------------------CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHH
Confidence 99984 9999999999999 67899999999999883 48999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLE 486 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 486 (803)
.+++++++++++...+..++++ ..+++...++++.+-++
T Consensus 365 ~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 365 AAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 9999977777777777777776 45899988888877654
No 42
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.90 E-value=4.5e-22 Score=224.20 Aligned_cols=286 Identities=17% Similarity=0.186 Sum_probs=206.1
Q ss_pred CeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhc---CCC--cHHHH--HHHhcCCEEeccCHhhHHHHHHH
Q 003682 141 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRT---LPI--RDELL--RALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 141 d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~---lp~--~~~il--~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
|+|++|++...+++.++++. .+.|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+....+.+...
T Consensus 103 Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~ 181 (405)
T TIGR03449 103 DLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVRH 181 (405)
T ss_pred CeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH
Confidence 99999987665555555543 467899999965432111110 111 11222 23456899999888777766541
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi 290 (803)
.+ ....++.++|+|+|.+.|.+. + . ...+.++ .++++|+++||+.+.||+
T Consensus 182 ----~~---------------~~~~ki~vi~ngvd~~~~~~~---~--~---~~~~~~~~~~~~~~~i~~~G~l~~~K~~ 234 (405)
T TIGR03449 182 ----YD---------------ADPDRIDVVAPGADLERFRPG---D--R---ATERARLGLPLDTKVVAFVGRIQPLKAP 234 (405)
T ss_pred ----cC---------------CChhhEEEECCCcCHHHcCCC---c--H---HHHHHhcCCCCCCcEEEEecCCCcccCH
Confidence 11 112367789999999888532 1 1 1223333 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRG-RDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 369 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~-~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly 369 (803)
..+++|++++++++|+. ++.|+++|.+. +++ +..++++ +++.+ .+..+.+.|.|.++.+++..+|
T Consensus 235 ~~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~~~l~----~~~~~-------~~l~~~v~~~g~~~~~~~~~~l 300 (405)
T TIGR03449 235 DVLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATPDALI----ELAAE-------LGIADRVRFLPPRPPEELVHVY 300 (405)
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHHHHHH----HHHHH-------cCCCceEEECCCCCHHHHHHHH
Confidence 99999999999988872 46788888644 223 3333333 33333 2334456778899999999999
Q ss_pred HhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHH
Q 003682 370 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEA 446 (803)
Q Consensus 370 ~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~a 446 (803)
+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|++++|.|++++|++
T Consensus 301 ~~ad~~v~ps~~E~~g~~~lEAma~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~ 361 (405)
T TIGR03449 301 RAADVVAVPSYNESFGLVAMEAQAC-------------------GTPVVAARVGGLPVAVADGETGLLVDGHDPADWADA 361 (405)
T ss_pred HhCCEEEECCCCCCcChHHHHHHHc-------------------CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHH
Confidence 9999999999999999999999999 67899999999888873 3899999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHH
Q 003682 447 MDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 488 (803)
Q Consensus 447 i~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 488 (803)
|.++++. ++.+....+..++.++.+++...++++++-+.++
T Consensus 362 i~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 362 LARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999984 4455555556666677799999998888776653
No 43
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.90 E-value=1.3e-22 Score=233.18 Aligned_cols=311 Identities=16% Similarity=0.199 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhhCC--CCeEEEEEecCCCC----hhhhhcCCCc-------
Q 003682 121 YVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRFN--RVKLGFFLHSPFPS----SEIYRTLPIR------- 186 (803)
Q Consensus 121 Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~~~--~~~i~~flH~pfP~----~~~~~~lp~~------- 186 (803)
|...++..++.+.+. .+| |+|++||+|..++|.++++... ++|+.++.|...+. .+.+..+...
T Consensus 111 ~~~f~~a~~~~~~~~~~~~--DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQP--DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHhcCCCC--CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 444455555544332 345 9999999999999999988764 38999999976421 1222111111
Q ss_pred -------HH-HHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCC
Q 003682 187 -------DE-LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL 258 (803)
Q Consensus 187 -------~~-il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~ 258 (803)
-. +..++..+|.|-..++.+++..... ..|... .+. ...+..++.++|+|||.+.|.+....
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~~l---~~~----l~~~~~ki~~I~NGid~~~~~p~~~~ 258 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGYGL---DGV----LKARSGKLRGILNGIDTEVWNPATDP 258 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCccc---hhH----HHhcCCCeEEEeCCCCccccCCCCCc
Confidence 01 1224555666655555555443321 000000 000 01133477889999999988643110
Q ss_pred c-----------hHHHHHHHHHHHhC-----CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 003682 259 P-----------ETEAKVAELQDQFK-----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 322 (803)
Q Consensus 259 ~-----------~~~~~~~~l~~~~~-----~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~ 322 (803)
. ........++++++ ++++|+++||+.+.||+..+++|++++.++. +.|+++|.+.
T Consensus 259 ~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g~-- 330 (473)
T TIGR02095 259 YLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTGD-- 330 (473)
T ss_pred ccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCCC--
Confidence 0 01112334566652 6789999999999999999999999987642 4588887432
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccc
Q 003682 323 RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLD 402 (803)
Q Consensus 323 ~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~ 402 (803)
+ ++.+++++++.+. +. .++++ ...+.+++..+|+.||++++||.+||||++.+|||+|
T Consensus 331 --~---~~~~~l~~~~~~~----~~----~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-------- 388 (473)
T TIGR02095 331 --P---ELEEALRELAERY----PG----NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY-------- 388 (473)
T ss_pred --H---HHHHHHHHHHHHC----CC----cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC--------
Confidence 2 3455555655442 11 13444 4567888899999999999999999999999999999
Q ss_pred cccCCCCCCCCCceEEecccccccccCC---------CCceeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHhhcccc
Q 003682 403 MTLGLDPSTAKSSMLVVSEFVGCSPSLS---------GAIRVNPWNIDAVAEAMDSALGV---SDAEKQMRHEKHYRYVS 470 (803)
Q Consensus 403 ~~~~~~~~~~~~g~vV~S~~~G~~~~l~---------~~~lvnP~d~~~~a~ai~~aL~~---~~~er~~r~~~~~~~v~ 470 (803)
|.|+|+|+.+|..+.+. +|++++|.|+++++++|.+++.+ .++.+....++.. ..
T Consensus 389 -----------G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~ 455 (473)
T TIGR02095 389 -----------GTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQ 455 (473)
T ss_pred -----------CCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--cc
Confidence 67899999999999882 37999999999999999999873 3333333333322 25
Q ss_pred cCCHHHHHHHHHHHHH
Q 003682 471 THDVAYWARSFLQDLE 486 (803)
Q Consensus 471 ~~~~~~W~~~~l~~l~ 486 (803)
.+++.+.++++++..+
T Consensus 456 ~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 456 DFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCcHHHHHHHHHHHH
Confidence 6888888888876554
No 44
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.90 E-value=1e-22 Score=228.79 Aligned_cols=302 Identities=15% Similarity=0.168 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCC--hhh-hh-cCCCc-------
Q 003682 118 WQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS--SEI-YR-TLPIR------- 186 (803)
Q Consensus 118 w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~--~~~-~~-~lp~~------- 186 (803)
+.....+-+.......+.++| |+|+.| +.+....++++.+|++++..++|..+-. .+. |. ..+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (396)
T cd03818 68 VLRGQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRL 143 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHH
Confidence 333444444433333445567 999999 5667778899999999998887744311 111 10 11111
Q ss_pred -HH---HHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHH
Q 003682 187 -DE---LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETE 262 (803)
Q Consensus 187 -~~---il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~ 262 (803)
.. ....+-.+|.+-..+......|.. .. ..++.++|+|||.+.|.+.. ...
T Consensus 144 ~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~--~~ki~vI~ngvd~~~f~~~~---~~~ 198 (396)
T cd03818 144 RNRNALILLALAQADAGVSPTRWQRSTFPA--------------------EL--RSRISVIHDGIDTDRLRPDP---QAR 198 (396)
T ss_pred HHhhhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hh--ccceEEeCCCccccccCCCc---hhh
Confidence 11 123455677766655433332221 00 13678899999999886421 111
Q ss_pred HHHHHHHHH---hCCCEEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchh---HHHHHHHHH
Q 003682 263 AKVAELQDQ---FKGQIVMLGVDD-MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRD---VQEVQSETH 335 (803)
Q Consensus 263 ~~~~~l~~~---~~~~~iil~V~R-ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~---~~~l~~~v~ 335 (803)
...+.. ..++++|+++|| +.+.||+..+++|+..+.+++|+++ |+++|......+.. ...++++
T Consensus 199 ---~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~-- 269 (396)
T cd03818 199 ---LRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQH-- 269 (396)
T ss_pred ---hcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHH--
Confidence 111111 146789999998 9999999999999999999888876 88888532111110 0112221
Q ss_pred HHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCc
Q 003682 336 ATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSS 415 (803)
Q Consensus 336 ~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g 415 (803)
+..+++.+.+ . +.+.|.|.++.+++.++|+.||++++||..||+|++++||||| |.
T Consensus 270 -~~~~~~~~~~---~-~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-------------------G~ 325 (396)
T cd03818 270 -MLDELGGRLD---L-SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-------------------GC 325 (396)
T ss_pred -HHHHhhcccC---c-ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-------------------CC
Confidence 2222222111 1 3456778999999999999999999999999999999999999 67
Q ss_pred eEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccccc-CCHHHHHHHHH
Q 003682 416 MLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFL 482 (803)
Q Consensus 416 ~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 482 (803)
|+|+|+.+|..+.+. +|++++|.|++++|++|.+++..+ +.+....+..++++.+ +++...+++++
T Consensus 326 PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 326 LVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 899999999998883 489999999999999999999854 5556666677777766 77777666654
No 45
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.90 E-value=1.2e-22 Score=215.96 Aligned_cols=235 Identities=14% Similarity=0.101 Sum_probs=151.6
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCc
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG 608 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~ 608 (803)
+|+|+|++|+||||++ ++..+++.++++|++| ++.|+.|++||||+...+...+..+. ..++++.||++|+.++.
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 5799999999999999 6677889999999998 89999999999999999999887763 23689999999987543
Q ss_pred e-------------eEEeecCCCCccHHHHHHHHHHHHhhcCCCc--eEeec---cc----eEEEe----ec--cCCCcc
Q 003682 609 V-------------DWETCVSVPDFSWKQIAEPVMKLYTETTDGS--TIETK---ES----ALVWN----FQ--YADPDF 660 (803)
Q Consensus 609 ~-------------~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~--~ie~k---~~----~~~~~----~~--~~d~~~ 660 (803)
. .|...... . .+.+.+++..+....... .+... +. .+... .. .....+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIELGP---P-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccCCccccccCCceEEEcCC---C-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 1 12111111 1 123333333222211000 00000 00 00000 00 000000
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCc-ccEEEEeCChhhHHHHHHcchh
Q 003682 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLP-DFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 661 ~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~-d~vla~GD~~NDi~Mf~~ag~s 739 (803)
......+..+.+.+.+...+..+..+..++||+|.+ +||.|++++++++ |+++ +++++|||+.||++||+.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~~ 229 (273)
T PRK00192 154 LWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADIA 229 (273)
T ss_pred eecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCee
Confidence 000011223334444444455566677899999999 9999999999999 9999 9999999999999999999998
Q ss_pred cCCCCCCCCcceEEEEeCCCCccc-eeEe----CCHhHHHHHHHHHHH
Q 003682 740 AAGPSLSPVAEVFACTVGQKPSKA-KYYL----DDTAEILRMLLGLAE 782 (803)
Q Consensus 740 ~a~~~~~~~~~~~~v~vG~~~s~A-~~~v----~~~~ev~~~L~~l~~ 782 (803)
++|+|+++..+. .....| ++.. ++.++|.+.|+++..
T Consensus 230 vam~NA~~~~k~------~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 230 VVVPGPDGPNPP------LLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred EEeCCCCCCCcc------cCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 888776653320 001223 3433 457899999998754
No 46
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.90 E-value=2.2e-22 Score=226.21 Aligned_cols=281 Identities=14% Similarity=0.131 Sum_probs=196.0
Q ss_pred HhhcCCCCCeEEEeCccccc-hHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHH-HhcCCEEeccCHhhHHHH
Q 003682 133 MEVISPDDDFVWVHDYHLMV-LPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRA-LLNADLIGFHTFDYARHF 210 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~-ll~~dligf~~~~~~~~F 210 (803)
++..+| |+|++|+++..+ ....+..+..+.|+.+..|..|+..+.... ....+.+- +-.+|.+.+.+....+.+
T Consensus 84 ~~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~ 159 (398)
T cd03796 84 LIRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENT 159 (398)
T ss_pred HHhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHH
Confidence 344567 999999987543 334443444568999999987753332110 11112222 335777777766555443
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCH
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi 290 (803)
... .+ ....++.++|+|+|.+.|.+... . ..+++++|+++||+.+.||+
T Consensus 160 ~~~----~~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~ 208 (398)
T cd03796 160 VLR----AS---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGI 208 (398)
T ss_pred HHH----hC---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCH
Confidence 221 01 11235678899999988853211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|+..+.+++|+++ |+++|. ++..+++++ ++.+ .+..+.+.+.|.++.+++..+|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~----~~~~-------~~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 209 DLLVGIIPEICKKHPNVR----FIIGGD-----GPKRILLEE----MREK-------YNLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred HHHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHHHH----HHHH-------hCCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999988888765 888873 333334443 3333 23334456678899999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-C-CceeCCCCHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G-AIRVNPWNIDAVAEAMD 448 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~-~~lvnP~d~~~~a~ai~ 448 (803)
.||++++||..||||++++||||| |.|||+|+.+|..+.+. + +++++| |.++++++|.
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~-------------------G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~ 328 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASC-------------------GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLE 328 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHc-------------------CCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHH
Confidence 999999999999999999999999 67899999999998883 3 444544 9999999999
Q ss_pred HHhCCCHHHHHHHHHHhhc-ccccCCHHHHHHHHHHHHHHHH
Q 003682 449 SALGVSDAEKQMRHEKHYR-YVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 449 ~aL~~~~~er~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
+++.++.+.+.. .+..++ ..+.+++..-++++++.++++.
T Consensus 329 ~~l~~~~~~~~~-~~~~~~~~~~~fs~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 329 EAISILRTGKHD-PWSFHNRVKKMYSWEDVAKRTEKVYDRIL 369 (398)
T ss_pred HHHhChhhhhhH-HHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 999865544333 333334 4566999999999988887654
No 47
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.90 E-value=1.6e-22 Score=213.02 Aligned_cols=227 Identities=15% Similarity=0.079 Sum_probs=146.3
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCcee--
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD-- 610 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~~~-- 610 (803)
+|++|+||||++ .++.+.+.++++|++| ++.|+.|++||||+...+.+++..+. ..+++++||++|+..++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999998 5553445799999998 88999999999999999999998764 3579999999998865422
Q ss_pred ---EEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccc---------eEEEe------eccCCCccchhhHHHHHHHH
Q 003682 611 ---WETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES---------ALVWN------FQYADPDFGSCQAKELLDHL 672 (803)
Q Consensus 611 ---~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~---------~~~~~------~~~~d~~~~~~~~~el~~~l 672 (803)
|.... ..++ +.+.++++.+....+..+...... .+... .......+ .. ..+..+.+
T Consensus 77 ~~~~~~~~---~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 150 (256)
T TIGR01486 77 PEYPVIAL---GIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI-LW-SEERRERF 150 (256)
T ss_pred CCeEEEEc---CCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce-ec-ChHHHHHH
Confidence 11111 1111 334444443322111100000000 00000 00000000 00 11223334
Q ss_pred HHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCC--cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcc
Q 003682 673 ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGML--PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAE 750 (803)
Q Consensus 673 ~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~--~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~ 750 (803)
.+.+......+..+..++||+|++++||.|++++++++ |++ .+++++|||+.||++||+.+|.++||+|+++...
T Consensus 151 ~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~ 227 (256)
T TIGR01486 151 TEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNV 227 (256)
T ss_pred HHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCcc
Confidence 44444334555556679999999999999999999999 999 9999999999999999999999887777653110
Q ss_pred eEEEEeCCCCcc--ce-eEe--CCHhHHHHHHHHH
Q 003682 751 VFACTVGQKPSK--AK-YYL--DDTAEILRMLLGL 780 (803)
Q Consensus 751 ~~~v~vG~~~s~--A~-~~v--~~~~ev~~~L~~l 780 (803)
..+.. |. |++ ++.++|.+.|+++
T Consensus 228 -------~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 228 -------SLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred -------ccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 01222 43 665 4679999999876
No 48
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.89 E-value=1.8e-22 Score=211.77 Aligned_cols=231 Identities=16% Similarity=0.228 Sum_probs=146.5
Q ss_pred eEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCc--EEecCcEEEEeCCce
Q 003682 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLG--IAAEHGYFVRPNYGV 609 (803)
Q Consensus 533 kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~--lia~nGa~i~~~~~~ 609 (803)
.+|++||||||+++...+...++++.++++++ .++|+.|++||||+..+++++...++ ..+ ++++||+.|+.++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 48999999999974334577889999999998 89999999999999999999976542 123 789999999876421
Q ss_pred ----eEEeecCCCCccHH-HHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCC---e
Q 003682 610 ----DWETCVSVPDFSWK-QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP---V 681 (803)
Q Consensus 610 ----~~~~~~~~~~~~~~-~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~---~ 681 (803)
.|.... ...|. +.+..+...+....+......+...+.+..... ...++.+.+.+.+...+ .
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEYL---SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHHH---hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCCEE
Confidence 111110 01121 112222222322222222233334444432211 12233444444444322 3
Q ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHH-cchhcCCCCCCCCcceEEEEeCCCC
Q 003682 682 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV-IKSAAAGPSLSPVAEVFACTVGQKP 760 (803)
Q Consensus 682 ~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~-ag~s~a~~~~~~~~~~~~v~vG~~~ 760 (803)
.+.++..++||+|++++||.|++++++++ |++++++++|||+.||++||+. ++.+++|+|+.+..+.. +-...
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~---~~~~~ 224 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQW---YDENA 224 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHH---HHhcc
Confidence 44678899999999999999999999999 9999999999999999999998 55654444432211100 00000
Q ss_pred ccceeEeC--CHhHHHHHHHHH
Q 003682 761 SKAKYYLD--DTAEILRMLLGL 780 (803)
Q Consensus 761 s~A~~~v~--~~~ev~~~L~~l 780 (803)
....|+.+ .++++++.|+++
T Consensus 225 ~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 225 KDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred cCcEEEecCCCcHHHHHHHHHc
Confidence 11225554 468888888765
No 49
>PTZ00174 phosphomannomutase; Provisional
Probab=99.89 E-value=1.1e-21 Score=205.27 Aligned_cols=199 Identities=15% Similarity=0.156 Sum_probs=128.4
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC--CC-CcEEecCcEEEEe
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EG-LGIAAEHGYFVRP 605 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l--~~-l~lia~nGa~i~~ 605 (803)
.|++|+|++||||||++ +++.+++.++++|+++ +++|+.|+|||||++..+.+.++.. .. ..+++.||+.|+.
T Consensus 2 ~~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 46789999999999999 7889999999999998 9999999999999999998888532 12 2578999999987
Q ss_pred CCceeEEeecCC-CCccHHHHHHHHHHHH-----hhcCCCceEeeccceEEEeec-cCCC-----c---c-c-hhhHHHH
Q 003682 606 NYGVDWETCVSV-PDFSWKQIAEPVMKLY-----TETTDGSTIETKESALVWNFQ-YADP-----D---F-G-SCQAKEL 668 (803)
Q Consensus 606 ~~~~~~~~~~~~-~~~~~~~~~~~i~~~y-----~~~~~g~~ie~k~~~~~~~~~-~~d~-----~---~-~-~~~~~el 668 (803)
.+...+...++. .+.+....+....+.+ .....+.+...........+. .... . + . .....++
T Consensus 78 ~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (247)
T PTZ00174 78 DGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKF 157 (247)
T ss_pred CCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHH
Confidence 655444443221 1222222222222111 011112232222111111110 0000 0 0 0 0112345
Q ss_pred HHHHHHHhcCCCeEEEE-CCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeC----ChhhHHHHHHcch
Q 003682 669 LDHLESVLANEPVSVKS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKS 738 (803)
Q Consensus 669 ~~~l~~~l~~~~~~v~~-g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD----~~NDi~Mf~~ag~ 738 (803)
.+.+.+.+.+....... +..++||+|+|+|||+||++|+++ +++++|||| +.||++||+.++.
T Consensus 158 ~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 158 IQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 55555555443333333 457999999999999999999986 489999999 9999999998754
No 50
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.88 E-value=1.5e-21 Score=223.83 Aligned_cols=282 Identities=15% Similarity=0.191 Sum_probs=196.0
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc-H---HHHHH-HhcCCEEeccCHhh
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-D---ELLRA-LLNADLIGFHTFDY 206 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~-~---~il~~-ll~~dligf~~~~~ 206 (803)
+++..+| |+|++|+...+.++.++..+..++|+.+.+|.-+|........++. . .+.+. .-.+|.|...+...
T Consensus 139 ~i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~ 216 (465)
T PLN02871 139 EVARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPAL 216 (465)
T ss_pred HHHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 3444567 9999998776666665544445788999999765542110011110 0 11111 22467777766655
Q ss_pred HHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh----CCCEEEEeec
Q 003682 207 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF----KGQIVMLGVD 282 (803)
Q Consensus 207 ~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~----~~~~iil~V~ 282 (803)
.+.+.. .+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++|
T Consensus 217 ~~~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vG 270 (465)
T PLN02871 217 GKELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVG 270 (465)
T ss_pred HHHHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeC
Confidence 554442 010 012357789999999988642211 1123322 3678999999
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCH
Q 003682 283 DMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQF 362 (803)
Q Consensus 283 Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~ 362 (803)
|+.+.||+..+++|++++ |++ .|+++| +++..++ +++++.. . + +.|.|.++.
T Consensus 271 rl~~~K~~~~li~a~~~~----~~~----~l~ivG-----~G~~~~~----l~~~~~~-------~---~-V~f~G~v~~ 322 (465)
T PLN02871 271 RLGAEKNLDFLKRVMERL----PGA----RLAFVG-----DGPYREE----LEKMFAG-------T---P-TVFTGMLQG 322 (465)
T ss_pred CCchhhhHHHHHHHHHhC----CCc----EEEEEe-----CChHHHH----HHHHhcc-------C---C-eEEeccCCH
Confidence 999999999999988653 554 488887 3343333 3333322 1 2 456788999
Q ss_pred HHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC------CCceeC
Q 003682 363 YERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------GAIRVN 436 (803)
Q Consensus 363 ~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~------~~~lvn 436 (803)
+++..+|+.||+||+||..||||++++||||| |.|+|+|+.+|..+.+. +|++++
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~-------------------G~PVI~s~~gg~~eiv~~~~~~~~G~lv~ 383 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMAS-------------------GVPVVAARAGGIPDIIPPDQEGKTGFLYT 383 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHc-------------------CCCEEEcCCCCcHhhhhcCCCCCceEEeC
Confidence 99999999999999999999999999999999 67899999999988773 289999
Q ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHH-HHHHH
Q 003682 437 PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD-LERAC 489 (803)
Q Consensus 437 P~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~ 489 (803)
|.|++++|++|.++++ +++.+....+..+++++++++...++++++. ..++.
T Consensus 384 ~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~ 436 (465)
T PLN02871 384 PGDVDDCVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAI 436 (465)
T ss_pred CCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 4556666677777788889999999999874 44443
No 51
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.88 E-value=4.4e-21 Score=223.90 Aligned_cols=334 Identities=11% Similarity=0.134 Sum_probs=207.1
Q ss_pred HHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCC----CChh-hhhcCCCc---
Q 003682 115 RSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSE-IYRTLPIR--- 186 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pf----P~~~-~~~~lp~~--- 186 (803)
.+.|..-..+....++.+....+..-|+|+.|...--+++..++++. ++|..+..|..= +.+. .+..+..+
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 45688888888888877765543112999999766667777776655 578777778431 1111 01101100
Q ss_pred ----HHHHHHHhcCCEEeccCHhhHHHHHHHHH-----HHhCceecccCceeeEEEcC---eEEEEeEecccCChhHHHH
Q 003682 187 ----DELLRALLNADLIGFHTFDYARHFLSCCS-----RMLGVSYQSKRGYIGLEYFG---RTVSIKILPVGIHIGQLQS 254 (803)
Q Consensus 187 ----~~il~~ll~~dligf~~~~~~~~Fl~~~~-----~~l~~~~~~~~~~~~~~~~g---~~~~v~v~p~Gid~~~f~~ 254 (803)
+.-+..|-.||.|--.|+.-...-...+. ..+.+ .+...+ .+| ...++.++|+|+|++.|.+
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~-----p~Ly~v-vnGid~~~~Ki~VVpPGVD~~iF~P 513 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTM-----PGLYRV-VHGIDVFDPKFNIVSPGADESIYFP 513 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccc-----cceeee-ecCccCCcCCeEEECCCcChhhcCC
Confidence 00124566688887666432111000000 00000 011111 111 1237788999999999865
Q ss_pred HhCCchHH-HHH----------HHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003682 255 VLNLPETE-AKV----------AELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 318 (803)
Q Consensus 255 ~~~~~~~~-~~~----------~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~ 318 (803)
........ ... ...++.+ +++++|++|||+++.||+..+++||.++.+.. ..+.|+++|.
T Consensus 514 ~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGG 589 (784)
T TIGR02470 514 YSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAG 589 (784)
T ss_pred CCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeC
Confidence 32211100 000 0112222 46889999999999999999999998764333 3456888886
Q ss_pred CCCC---CchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCC-CCHHHHHHHHH----hcccceecccccCCCCCcee
Q 003682 319 PARG---RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP-LQFYERIAYYV----IAECCLVTAVRDGMNLIPYE 390 (803)
Q Consensus 319 ~~~~---~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~-~~~~~l~aly~----~Adv~v~~S~~EG~~lv~~E 390 (803)
+... ...+..+..+++.+++.+.+ ....+.|.|. .+..++..+|+ .+||||+||.+||||||++|
T Consensus 590 g~~~~~s~d~ee~~~i~~L~~la~~~g-------L~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLE 662 (784)
T TIGR02470 590 KLDAKESKDREEQAEIEKMHNLIDQYQ-------LHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLE 662 (784)
T ss_pred CcccccccchhHHHHHHHHHHHHHHhC-------CCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHH
Confidence 5321 11122233445555555532 2233445554 35566666665 24799999999999999999
Q ss_pred eeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhC---CCHHHHHHHHHH
Q 003682 391 YIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALG---VSDAEKQMRHEK 464 (803)
Q Consensus 391 a~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~---~~~~er~~r~~~ 464 (803)
|||| |.|+|+|+.+|..+.+. +|++|+|.|++++|++|.++++ .+++.+....+.
T Consensus 663 AMAc-------------------GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~ 723 (784)
T TIGR02470 663 AMTC-------------------GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQG 723 (784)
T ss_pred HHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 9999 67899999999999883 4899999999999999999873 345555555666
Q ss_pred hhccc-ccCCHHHHHHHHHHHH
Q 003682 465 HYRYV-STHDVAYWARSFLQDL 485 (803)
Q Consensus 465 ~~~~v-~~~~~~~W~~~~l~~l 485 (803)
.++++ +.+++...++++++..
T Consensus 724 a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 724 GLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHhCCHHHHHHHHHHHH
Confidence 66665 5689999999887654
No 52
>PLN00142 sucrose synthase
Probab=99.88 E-value=3.2e-21 Score=225.04 Aligned_cols=330 Identities=13% Similarity=0.174 Sum_probs=201.8
Q ss_pred HHhHHHHHHHHHHHHHHHHhhcC--CCCCeEEEeCccccchHHHHHhhCCCCeEEEEEec-----------CCCChh-hh
Q 003682 115 RSLWQAYVSVNKIFADKVMEVIS--PDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS-----------PFPSSE-IY 180 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~~~~--~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~-----------pfP~~~-~~ 180 (803)
.+.|..-.+++...++.+....+ | |+|+-|...--+++..|+++. ++|..++.|. +|...+ -|
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~P--DlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y 460 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKP--DLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKY 460 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhh
Confidence 45788888888888877755443 5 999999655556777776665 6889999993 221111 11
Q ss_pred hcC-CCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceeccc-----Ccee----eEEEcCeEEEEeEecccCChh
Q 003682 181 RTL-PIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSK-----RGYI----GLEYFGRTVSIKILPVGIHIG 250 (803)
Q Consensus 181 ~~l-p~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~-----~~~~----~~~~~g~~~~v~v~p~Gid~~ 250 (803)
+.. -...+. ..|-.||.|--.|+.-....-.. + + .+.+- .+.. ++... .-++.++|+|+|..
T Consensus 461 ~~~~r~~aE~-~a~~~Ad~IIasT~qEi~g~~~~---i-~-qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~ 532 (815)
T PLN00142 461 HFSCQFTADL-IAMNHADFIITSTYQEIAGSKDT---V-G-QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMS 532 (815)
T ss_pred hhhhchHHHH-HHHHhhhHHHhCcHHHHhcccch---h-h-hhhcccccccchhhhhhcccccc--ccCeeEECCCCChh
Confidence 100 000111 13444554443332211100000 0 0 00000 0000 01111 12778899999999
Q ss_pred HHHHHhCCch--------HHHHH---HHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 003682 251 QLQSVLNLPE--------TEAKV---AELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLV 314 (803)
Q Consensus 251 ~f~~~~~~~~--------~~~~~---~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv 314 (803)
.|.+...... ..... ...++.+ +++++|++|||+++.||+..+++||.++.+..++ +.|+
T Consensus 533 ~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LV 608 (815)
T PLN00142 533 IYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLV 608 (815)
T ss_pred hcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEE
Confidence 8864211000 00000 0011111 3577999999999999999999999988666554 4588
Q ss_pred EEecCCCC-CchhH--HHHHHHHHHHHHHHhcccCCCCccc-EEEec---CCCCHHHHHHHHH-hcccceecccccCCCC
Q 003682 315 QIANPARG-RGRDV--QEVQSETHATVRRINKIFGRPGYQP-VVLID---TPLQFYERIAYYV-IAECCLVTAVRDGMNL 386 (803)
Q Consensus 315 ~i~~~~~~-~~~~~--~~l~~~v~~lv~~in~~~~~~~~~~-v~~~~---~~~~~~~l~aly~-~Adv~v~~S~~EG~~l 386 (803)
++|.+... ..++. .+..+++.+++.+.+ ... |.++. +..+.++++.+|+ ++|+||+||.+||||+
T Consensus 609 IVGgg~d~~~s~d~ee~~el~~L~~La~~lg-------L~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGL 681 (815)
T PLN00142 609 VVGGFIDPSKSKDREEIAEIKKMHSLIEKYN-------LKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGL 681 (815)
T ss_pred EEECCccccccccHHHHHHHHHHHHHHHHcC-------CCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCH
Confidence 88854211 11111 112234555555532 222 33332 2455678888777 5799999999999999
Q ss_pred CceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhC---CCHHHHHH
Q 003682 387 IPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALG---VSDAEKQM 460 (803)
Q Consensus 387 v~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~---~~~~er~~ 460 (803)
|++||||| |.|+|+|+.+|..+.+. +|++|+|.|++++|++|.+++. .+++.+..
T Consensus 682 vvLEAMA~-------------------GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~ 742 (815)
T PLN00142 682 TVVEAMTC-------------------GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNK 742 (815)
T ss_pred HHHHHHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 99999999 67899999999999883 3899999999999999988753 35666666
Q ss_pred HHHHhhccc-ccCCHHHHHHHHHHHH
Q 003682 461 RHEKHYRYV-STHDVAYWARSFLQDL 485 (803)
Q Consensus 461 r~~~~~~~v-~~~~~~~W~~~~l~~l 485 (803)
..+..++++ +.+++...++++++-.
T Consensus 743 mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 743 ISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 666666666 6699999999887754
No 53
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.88 E-value=1.2e-21 Score=201.90 Aligned_cols=197 Identities=17% Similarity=0.121 Sum_probs=124.6
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-C-CcEEecCcEEEEeCCce-e
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-G-LGIAAEHGYFVRPNYGV-D 610 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~-l~lia~nGa~i~~~~~~-~ 610 (803)
+|++|+||||++ ++..+++.++++|++| +++|+.|++||||+...++.++..+. . .++|++||+.|+..... .
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999999 5565666699999998 88999999999999999999998763 2 46999999999875321 1
Q ss_pred E---EeecCCCCccHHHHHHHHHHHHhhc--CCCceEee------c-cceEEE------eeccCCCccchhhHHHHHHHH
Q 003682 611 W---ETCVSVPDFSWKQIAEPVMKLYTET--TDGSTIET------K-ESALVW------NFQYADPDFGSCQAKELLDHL 672 (803)
Q Consensus 611 ~---~~~~~~~~~~~~~~~~~i~~~y~~~--~~g~~ie~------k-~~~~~~------~~~~~d~~~~~~~~~el~~~l 672 (803)
+ ...... ..+ +.+.++++...+. ..-..... . ...+.. ........+......+..+.+
T Consensus 77 ~~~~~~~~~~--~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRIILG--ISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEecC--CCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 111011 111 2233333222111 00000000 0 000000 000000000000011222333
Q ss_pred HHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhc
Q 003682 673 ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 740 (803)
Q Consensus 673 ~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~ 740 (803)
.+.+......+..+..++||+|++++||.|++++++++ |++++++++|||+.||++||+.+|.++
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~v 218 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYAV 218 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCceE
Confidence 33333334555556789999999999999999999999 999999999999999999999999863
No 54
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.88 E-value=4.2e-21 Score=213.89 Aligned_cols=207 Identities=14% Similarity=0.164 Sum_probs=158.0
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 315 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 315 (803)
.++.++|+|||.+.|.+... .. ....++.+ .++.+|+++||+++.||+..+++|+..++++.|+...++.|++
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~~--~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---DR--SPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---ch--hhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 35677899999988753211 11 11112222 4678999999999999999999999999999987666688998
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeee
Q 003682 316 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 316 i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~ 395 (803)
+|. ++..+++++ ++.+ .+....+++.|. .+++..+|+.||++++||..||||++++|||+|
T Consensus 235 ~G~-----g~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~- 295 (374)
T TIGR03088 235 VGD-----GPARGACEQ----MVRA-------AGLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS- 295 (374)
T ss_pred ecC-----CchHHHHHH----HHHH-------cCCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-
Confidence 883 333333433 3333 334456677774 568999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-cc
Q 003682 396 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-ST 471 (803)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~ 471 (803)
|.|+|+|+.+|..+.+. .|++++|.|++++|++|.++++. ++.+....++.++++ ..
T Consensus 296 ------------------G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~ 356 (374)
T TIGR03088 296 ------------------GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQ 356 (374)
T ss_pred ------------------CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHh
Confidence 67899999999999883 38999999999999999999874 445555666666665 56
Q ss_pred CCHHHHHHHHHHHHHH
Q 003682 472 HDVAYWARSFLQDLER 487 (803)
Q Consensus 472 ~~~~~W~~~~l~~l~~ 487 (803)
+++...++++.+...+
T Consensus 357 fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 357 FSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8999888888776654
No 55
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.88 E-value=3.3e-21 Score=221.93 Aligned_cols=312 Identities=18% Similarity=0.200 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhhC-----CCCeEEEEEecCCCCh----hhhhc--CCC-
Q 003682 119 QAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRF-----NRVKLGFFLHSPFPSS----EIYRT--LPI- 185 (803)
Q Consensus 119 ~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~~-----~~~~i~~flH~pfP~~----~~~~~--lp~- 185 (803)
..|...++...+.+.+. .+| |+|++||+|-.++|.++++.. .+.|+.|+.|.+.+.. ..+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34555555555555442 455 999999999999999998764 5789999999864321 11111 111
Q ss_pred ------------c-HHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHH
Q 003682 186 ------------R-DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQL 252 (803)
Q Consensus 186 ------------~-~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f 252 (803)
. .-+..++..+|.|-..++.+++..++.. . ..+.. -....+..++.++|+|||.+.|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-------~--~~gl~-~~~~~~~~ki~~I~NGid~~~~ 257 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-------F--GEGLD-GLLRARAGKLSGILNGIDYDVW 257 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-------C--CcchH-HHHHhccCCeEEEeCCCcCccc
Confidence 0 1222345556666555555555433200 0 00000 0001123578889999999988
Q ss_pred HHHhCCc-----------hHHHHHHHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003682 253 QSVLNLP-----------ETEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 316 (803)
Q Consensus 253 ~~~~~~~-----------~~~~~~~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i 316 (803)
.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.++. +.|+++
T Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~ 331 (476)
T cd03791 258 NPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVIL 331 (476)
T ss_pred CccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEE
Confidence 7432211 0112223455555 46789999999999999999999999987653 448877
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 317 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 317 ~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
|.+. + .+.+.+.+++.+.. ..++++.+ .+.+++..+|+.||++++||..||||++.+|||+|
T Consensus 332 G~g~----~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-- 393 (476)
T cd03791 332 GSGD----P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY-- 393 (476)
T ss_pred ecCC----H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC--
Confidence 7431 2 24445555444421 13555554 45777889999999999999999999999999999
Q ss_pred CCcccccccCCCCCCCCCceEEecccccccccC-C--------CCceeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHHh
Q 003682 397 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--------GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHEKH 465 (803)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~--------~~~lvnP~d~~~~a~ai~~aL~~~--~~er~~r~~~~ 465 (803)
|.|+|+|+.+|..+.+ + +|++|+|.|+++++++|.+++... ++.+....++.
T Consensus 394 -----------------G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~ 456 (476)
T cd03791 394 -----------------GTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNA 456 (476)
T ss_pred -----------------CCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 6789999999999988 3 599999999999999999998642 33333333333
Q ss_pred hcccccCCHHHHHHHHHHHH
Q 003682 466 YRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 466 ~~~v~~~~~~~W~~~~l~~l 485 (803)
.+ ..+++..-++++++.+
T Consensus 457 ~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 457 MA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred hc--cCCChHHHHHHHHHHH
Confidence 22 3478788777776644
No 56
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.87 E-value=9.4e-21 Score=212.21 Aligned_cols=296 Identities=20% Similarity=0.173 Sum_probs=203.2
Q ss_pred HHHHHHHhhc-CCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcC-----C-Cc-HHHHHHHhcCCE
Q 003682 127 IFADKVMEVI-SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-----P-IR-DELLRALLNADL 198 (803)
Q Consensus 127 ~fa~~i~~~~-~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~l-----p-~~-~~il~~ll~~dl 198 (803)
.+...+.+.. +| |+|++|++....++..+.+. .+.|+.+..|...+........ + .+ ......+..+|.
T Consensus 90 ~~~~~~~~~~~~~--Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 166 (398)
T cd03800 90 DLLRFLRREGGRP--DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADR 166 (398)
T ss_pred HHHHHHHhcCCCc--cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCE
Confidence 3334443332 55 99999988776666666544 4688889999754322110000 0 00 111223456899
Q ss_pred EeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEE
Q 003682 199 IGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVM 278 (803)
Q Consensus 199 igf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~ii 278 (803)
+.+.+......+... .+ ....++.++|+|+|.+.|....... .....+ ....++++|
T Consensus 167 ii~~s~~~~~~~~~~----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~-~~~~~~~~i 223 (398)
T cd03800 167 VIASTPQEAEELYSL----YG---------------AYPRRIRVVPPGVDLERFTPYGRAE---ARRARL-LRDPDKPRI 223 (398)
T ss_pred EEEcCHHHHHHHHHH----cc---------------ccccccEEECCCCCccceecccchh---hHHHhh-ccCCCCcEE
Confidence 888877665555431 11 1112367899999998875332111 111111 111467899
Q ss_pred EeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecC
Q 003682 279 LGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDT 358 (803)
Q Consensus 279 l~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~ 358 (803)
+++||+++.||+..+++|+..+.+++|+++ |+++|.......+ ....+++.++.+. +..+.+.+.|
T Consensus 224 ~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~----l~i~G~~~~~~~~---~~~~~~~~~~~~~-------~~~~~v~~~g 289 (398)
T cd03800 224 LAVGRLDPRKGIDTLIRAYAELPELRERAN----LVIVGGPRDDILA---MDEEELRELAREL-------GVIDRVDFPG 289 (398)
T ss_pred EEEcccccccCHHHHHHHHHHHHHhCCCeE----EEEEECCCCcchh---hhhHHHHHHHHhc-------CCCceEEEec
Confidence 999999999999999999999988877655 8888865422211 2223344444442 2334566788
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCcee
Q 003682 359 PLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRV 435 (803)
Q Consensus 359 ~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lv 435 (803)
.++.+++..+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|+++
T Consensus 290 ~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~-------------------G~Pvi~s~~~~~~e~i~~~~~g~~~ 350 (398)
T cd03800 290 RVSREDLPALYRAADVFVNPALYEPFGLTALEAMAC-------------------GLPVVATAVGGPRDIVVDGVTGLLV 350 (398)
T ss_pred cCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhc-------------------CCCEEECCCCCHHHHccCCCCeEEe
Confidence 999999999999999999999999999999999999 66799999999998882 48999
Q ss_pred CCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHH
Q 003682 436 NPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 482 (803)
Q Consensus 436 nP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 482 (803)
+|.|+++++++|.++++. ++.+....+..++++ +.++++.++++++
T Consensus 351 ~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 351 DPRDPEALAAALRRLLTD-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred CCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 999999999999999975 445555556666666 6789888888765
No 57
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.87 E-value=3.8e-21 Score=200.14 Aligned_cols=218 Identities=15% Similarity=0.164 Sum_probs=141.8
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-C--CcEEecCcEEEEeCCcee
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-G--LGIAAEHGYFVRPNYGVD 610 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~--l~lia~nGa~i~~~~~~~ 610 (803)
+|++||||||++ ++..+++.+ ++++ + +++|+.++++|||+...+++++..+. . ..++++||+.|.......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 589999999999 667777766 6776 5 88899999999999999999997662 1 238999999887643210
Q ss_pred EEeecCCCCccHHHHH-----HHHHHHHhhcCCCceEeeccc--eEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEE
Q 003682 611 WETCVSVPDFSWKQIA-----EPVMKLYTETTDGSTIETKES--ALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSV 683 (803)
Q Consensus 611 ~~~~~~~~~~~~~~~~-----~~i~~~y~~~~~g~~ie~k~~--~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 683 (803)
.+..|.... ...+..+....++..++.+.. ...+++... ++.. ....++.+.+.+. ......+
T Consensus 75 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~-~~~~~~~ 144 (236)
T TIGR02471 75 -------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ-SQAAKVI 144 (236)
T ss_pred -------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc-cCCEEEE
Confidence 011121111 001122333455554444321 234444432 2211 1123333444332 1111234
Q ss_pred EECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccc
Q 003682 684 KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKA 763 (803)
Q Consensus 684 ~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A 763 (803)
.++..++|++|+++|||.|++++++++ |++++++++|||+.||++||+.+|.+++|+|+.+. .+..|
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~----------~k~~a 211 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE----------LEGLR 211 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH----------HHHhh
Confidence 567788999999999999999999999 99999999999999999999999875433332211 13445
Q ss_pred e----eEe--CCHhHHHHHHHHH
Q 003682 764 K----YYL--DDTAEILRMLLGL 780 (803)
Q Consensus 764 ~----~~v--~~~~ev~~~L~~l 780 (803)
+ |++ ++.++|.+.|+.+
T Consensus 212 ~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 212 HQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred cCCcEEEcCCCChhHHHHHHHhh
Confidence 5 655 3567899988764
No 58
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.87 E-value=1.3e-20 Score=210.92 Aligned_cols=284 Identities=15% Similarity=0.132 Sum_probs=196.8
Q ss_pred CCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhh-----hcCCCcHHH-HHHHhcCCEEeccCHhhHHHHHHH
Q 003682 140 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY-----RTLPIRDEL-LRALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 140 ~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~-----~~lp~~~~i-l~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
-|+|++|++...+.+.+++ +..+.|+.+.+|..+|..... ........+ ...+-.+|.+-..+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 3999999988765555444 445788999999866532110 000001111 123445777777666555544421
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi 290 (803)
. -+ -...++.++|+|+|++.|.+. + ....+.++ .++++|+++||+.+.||+
T Consensus 163 ~---~~---------------~~~~~i~vi~ng~~~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PD---------------LDPEKVHVIYNGIDTKEYKPD---D-----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CC---------------CCcceEEEecCCCChhhcCCC---c-----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 01 112367789999999877531 1 11233333 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|++++. ++. .++++|.+. +..++.+++++++..++... ..++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~----~l~i~g~g~-----~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDV----QVVLCAGAP-----DTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcC----cEEEEeCCC-----CcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 333 366665322 22334555555555443221 23677888899999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCH------H
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI------D 441 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~------~ 441 (803)
.||+||+||..||||++++|||+| |.|+|+|+.+|..+.+. .|++++|.|. +
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~-------------------G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~ 340 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMAC-------------------GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQA 340 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHc-------------------CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHH
Confidence 999999999999999999999999 67899999999998883 3899999998 9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHHHHH
Q 003682 442 AVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 487 (803)
Q Consensus 442 ~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 487 (803)
+++++|.++++. ++++....+..++.+ ..+++..+++++++.+++
T Consensus 341 ~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 341 ELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 999999999874 555555555555554 569999999998877664
No 59
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.87 E-value=7e-21 Score=214.79 Aligned_cols=195 Identities=17% Similarity=0.144 Sum_probs=146.2
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEe
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKR-GKIVLVQIA 317 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~-~~v~lv~i~ 317 (803)
++.++|+|+|.+.|..... ....++++|+++||+.+.||+..+|+||..+.++.|+.. .++.|+++|
T Consensus 213 ~~~vi~~gvd~~~~~~~~~------------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG 280 (419)
T cd03806 213 KPSIVYPPCDVEELLKLPL------------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIG 280 (419)
T ss_pred CcEEEcCCCCHHHhccccc------------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEc
Confidence 5677899999988753210 012356799999999999999999999999999887631 246688888
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
.... ++..++.+++++++.+. +..+.+.|.+.++.+++..+|+.||+++.||..||||++++|||||
T Consensus 281 ~~~~---~~~~~~~~~L~~~~~~l-------~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~--- 347 (419)
T cd03806 281 SCRN---EDDEKRVEDLKLLAKEL-------GLEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA--- 347 (419)
T ss_pred CCCC---cccHHHHHHHHHHHHHh-------CCCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc---
Confidence 5321 11223555566666653 3334567778899999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCCceEEecccccccc-cCC------CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccc
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSP-SLS------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS 470 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~-~l~------~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~ 470 (803)
|.|+|+|+.+|..+ .+. .|++++ |++++|++|.++++++++++..+.+..++...
T Consensus 348 ----------------G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~ 409 (419)
T cd03806 348 ----------------GLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVK 409 (419)
T ss_pred ----------------CCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 66799999888654 343 378874 99999999999999988777655444444445
Q ss_pred cCCHHH
Q 003682 471 THDVAY 476 (803)
Q Consensus 471 ~~~~~~ 476 (803)
+++...
T Consensus 410 ~fs~~~ 415 (419)
T cd03806 410 RFSDEE 415 (419)
T ss_pred hhCHHH
Confidence 565544
No 60
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.87 E-value=1.1e-20 Score=208.49 Aligned_cols=281 Identities=19% Similarity=0.225 Sum_probs=195.5
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHH-hcCCEEeccCHhhHHH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL-LNADLIGFHTFDYARH 209 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~l-l~~dligf~~~~~~~~ 209 (803)
++++..+| |+|++|.+|..++..+++...+..++....|...+...+ +..+.+.. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34456677 899999999888888887776677888888854322111 01111110 1134333334444443
Q ss_pred HHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCccc
Q 003682 210 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDI 286 (803)
Q Consensus 210 Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~ 286 (803)
|... + .-...++.++|+|+|...|.... .....+++.+ +++++++++||+.+
T Consensus 145 ~~~~-----~--------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIAS-----K--------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhc-----c--------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 3321 0 00123567889999988775311 1223344544 46789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 003682 287 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 366 (803)
Q Consensus 287 ~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~ 366 (803)
.||+..+++|+.++.+++|+++ |+++|. ++..+++++.+ .+. +..+.+.+.|. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~~~~----~~~-------~~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLERLI----KAL-------GLSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHHHHH----Hhc-------CCCCcEEEecc--cccHH
Confidence 9999999999999998888765 888873 33333344333 332 22334555555 45899
Q ss_pred HHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHH
Q 003682 367 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAE 445 (803)
Q Consensus 367 aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ 445 (803)
.+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+ ++|..++|.|++++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMAC-------------------ELPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHc-------------------CCCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 9999999999999999999999999999 6679999999988888 4589999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 446 AMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 446 ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
+|.+++..++..+..+.+........+++..+++++++-+
T Consensus 319 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777777666665333456699999998887654
No 61
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.86 E-value=1.1e-20 Score=211.17 Aligned_cols=294 Identities=10% Similarity=0.034 Sum_probs=188.3
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeE-EEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKL-GFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 209 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i-~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~ 209 (803)
.+++..+| |+|+.|++.-.++..+..... ..|+ ....|. ++....-+.+-.. ...+..++++.-.+. ++.+
T Consensus 274 ~~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~~e---~~~~~~a~~i~~~sd-~v~~ 345 (578)
T PRK15490 274 PHLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFKPE---YEPLYQALAVVPGVD-FMSN 345 (578)
T ss_pred HHHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHHHH---HHHhhhhceeEecch-hhhc
Confidence 34556677 999999999877766665544 3444 444565 3322111100000 012333454433232 3333
Q ss_pred HHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-CCCEEEEeecCccccc
Q 003682 210 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFK 288 (803)
Q Consensus 210 Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~~~~iil~V~Rld~~K 288 (803)
.....+.+.. .++....++.++|+|||++.|.+....+ ......++..+ .+.++|++|+|+.+.|
T Consensus 346 s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~K 411 (578)
T PRK15490 346 NHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDK 411 (578)
T ss_pred cHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhc
Confidence 3322222110 0011234678899999999886432111 11111222223 3457899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 003682 289 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 368 (803)
Q Consensus 289 gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~al 368 (803)
|...+++|+.+++++.|+++ |+++|. ++..+ ++++++.+ .++.+.+.|.|. .+++..+
T Consensus 412 g~~~LI~A~a~llk~~pdir----LvIVGd-----G~~~e----eLk~la~e-------lgL~d~V~FlG~--~~Dv~~~ 469 (578)
T PRK15490 412 NPFAWIDFAARYLQHHPATR----FVLVGD-----GDLRA----EAQKRAEQ-------LGILERILFVGA--SRDVGYW 469 (578)
T ss_pred CHHHHHHHHHHHHhHCCCeE----EEEEeC-----chhHH----HHHHHHHH-------cCCCCcEEECCC--hhhHHHH
Confidence 99999999999999888765 888883 34333 34444444 333345566665 5689999
Q ss_pred HHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHH
Q 003682 369 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 445 (803)
Q Consensus 369 y~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ 445 (803)
|+.||+||+||.+||||++++||||| |.|+|+|+.+|..+.+. +|++|+|.|++++++
T Consensus 470 LaaADVfVlPS~~EGfp~vlLEAMA~-------------------GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ 530 (578)
T PRK15490 470 LQKMNVFILFSRYEGLPNVLIEAQMV-------------------GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQ 530 (578)
T ss_pred HHhCCEEEEcccccCccHHHHHHHHh-------------------CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHH
Confidence 99999999999999999999999999 67899999999999882 489999999999988
Q ss_pred HHHHHhCCC--HHHHHHHHHHhhccc-ccCCHHHHHHHHHHHHHH
Q 003682 446 AMDSALGVS--DAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 487 (803)
Q Consensus 446 ai~~aL~~~--~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 487 (803)
++..+..+. ...+....+..++++ ..+++...++++++.++.
T Consensus 531 ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 531 ACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 875433322 122333445566666 459999999888876654
No 62
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.86 E-value=7.1e-21 Score=218.50 Aligned_cols=275 Identities=17% Similarity=0.115 Sum_probs=189.9
Q ss_pred CCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCCh---hhhhc---CCCcHHH--------HH-HHhcCCEEeccC
Q 003682 139 DDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYRT---LPIRDEL--------LR-ALLNADLIGFHT 203 (803)
Q Consensus 139 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~---~~~~~---lp~~~~i--------l~-~ll~~dligf~~ 203 (803)
+-|+|++|......+++.+..+..+.|+.+..|--+|.. ++... .+....+ .+ .+-.||.|-..+
T Consensus 173 ~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~s 252 (475)
T cd03813 173 KADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTLY 252 (475)
T ss_pred CCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEecC
Confidence 359999998766666666655566889999999655421 12111 0000000 00 112345444433
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecC
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDD 283 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~R 283 (803)
.... ..+. .++....++.++|+|||.+.|.+... . ....++++|+++||
T Consensus 253 ~~~~-~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~-----~------~~~~~~~~i~~vGr 301 (475)
T cd03813 253 EGNR-ERQI-------------------EDGADPEKIRVIPNGIDPERFAPARR-----A------RPEKEPPVVGLIGR 301 (475)
T ss_pred HHHH-HHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc-----c------ccCCCCcEEEEEec
Confidence 3221 1111 11122346778999999998863211 0 11246789999999
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHH
Q 003682 284 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 363 (803)
Q Consensus 284 ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~ 363 (803)
+.+.||+..+++|++.+.++.|+++ |+++|.+. +..++.+++++++.+.+ ..+.+.|.| .+
T Consensus 302 l~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~li~~l~-------l~~~V~f~G---~~ 362 (475)
T cd03813 302 VVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRELVESLG-------LEDNVKFTG---FQ 362 (475)
T ss_pred cccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHHHHHHhC-------CCCeEEEcC---Cc
Confidence 9999999999999999998888765 88887432 22345566666666643 333456666 56
Q ss_pred HHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-C--------CCce
Q 003682 364 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--------GAIR 434 (803)
Q Consensus 364 ~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~--------~~~l 434 (803)
++..+|+.||++|+||..||||++++||||| |.|+|+|+.+|+.+.+ + .|++
T Consensus 363 ~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-------------------G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 363 NVKEYLPKLDVLVLTSISEGQPLVILEAMAA-------------------GIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred cHHHHHHhCCEEEeCchhhcCChHHHHHHHc-------------------CCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 8999999999999999999999999999999 6789999999998888 3 4899
Q ss_pred eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccccc-CCHHHHHHHHHH
Q 003682 435 VNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQ 483 (803)
Q Consensus 435 vnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 483 (803)
++|.|++++|++|.++++. ++.+....+..++++.+ +++...++++.+
T Consensus 424 v~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 424 VPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred ECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999984 45556666666666655 576777776654
No 63
>PLN02382 probable sucrose-phosphatase
Probab=99.86 E-value=7.8e-21 Score=211.46 Aligned_cols=237 Identities=16% Similarity=0.155 Sum_probs=149.1
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHH-HHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CC--cEEecCcEEEE
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAIL-DNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GL--GIAAEHGYFVR 604 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL-~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l--~lia~nGa~i~ 604 (803)
.+...+|++||||||+++. .+..++.....+| +++ .++|+.++++|||+...+.++.+.++ .. -+++.||+.|.
T Consensus 6 ~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIA 83 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEE
Confidence 4567899999999999831 1446776666666 776 88999999999999988888876552 12 26788999998
Q ss_pred eCCceeEEeecCCCCccHHHHHH---------HHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHH
Q 003682 605 PNYGVDWETCVSVPDFSWKQIAE---------PVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESV 675 (803)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~---------~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~ 675 (803)
..+... .+..|...+. +.+..|.........+.+...+.+.... ....++.+.+.+.
T Consensus 84 ~~~~~~-------~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~-------~~~~~~~~~l~~~ 149 (413)
T PLN02382 84 YGESMV-------PDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDK-------KKAQEVIKELSER 149 (413)
T ss_pred eCCCCc-------cChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEech-------HHhHHHHHHHHHH
Confidence 754221 1222322221 1111111111111112222233333221 1223344555555
Q ss_pred hcCCC---eEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcc-hhcCCCCCCCCcce
Q 003682 676 LANEP---VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK-SAAAGPSLSPVAEV 751 (803)
Q Consensus 676 l~~~~---~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag-~s~a~~~~~~~~~~ 751 (803)
+...+ ..+.++..++||+|+++|||.|+++|++++...|++++++++|||+.||++||+.+| .+++|+|+.+..+-
T Consensus 150 ~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~ 229 (413)
T PLN02382 150 LEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQ 229 (413)
T ss_pred HHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHH
Confidence 54322 344678899999999999999999999997555789999999999999999999999 67666554432211
Q ss_pred EEEEeCCCCccceeEe---CCHhHHHHHHHHHHHh
Q 003682 752 FACTVGQKPSKAKYYL---DDTAEILRMLLGLAEA 783 (803)
Q Consensus 752 ~~v~vG~~~s~A~~~v---~~~~ev~~~L~~l~~~ 783 (803)
.+-. .....|++++ ++.+++.+.|+++.-.
T Consensus 230 ~a~~--~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 230 WYAE--NAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred HHHh--hccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 0000 0112235543 3578999999988754
No 64
>PLN02423 phosphomannomutase
Probab=99.86 E-value=4.8e-20 Score=192.03 Aligned_cols=215 Identities=17% Similarity=0.145 Sum_probs=136.3
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC-C-C-CcEEecCcEEEEeC
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-E-G-LGIAAEHGYFVRPN 606 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l-~-~-l~lia~nGa~i~~~ 606 (803)
.+++++++|+||||++ +++.+++++.++|++| ++. +.|++||||+...+.+.++.. . . ..++++||+++...
T Consensus 5 ~~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~ 79 (245)
T PLN02423 5 KPGVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKD 79 (245)
T ss_pred ccceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeC
Confidence 3456777999999999 7888999999999999 665 999999999999998877643 1 1 36889999999876
Q ss_pred CceeEEeecCC-CCccHHHHHHHHHHHHhh-----cCCCceEeeccceEEEe--eccCCCc---------cchhhHHHHH
Q 003682 607 YGVDWETCVSV-PDFSWKQIAEPVMKLYTE-----TTDGSTIETKESALVWN--FQYADPD---------FGSCQAKELL 669 (803)
Q Consensus 607 ~~~~~~~~~~~-~~~~~~~~~~~i~~~y~~-----~~~g~~ie~k~~~~~~~--~~~~d~~---------~~~~~~~el~ 669 (803)
+...+...++. .+.+....+.+..+.+.. ...+.+++..+...... +.++... .-.....++.
T Consensus 80 g~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 159 (245)
T PLN02423 80 GKLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMV 159 (245)
T ss_pred CEEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHH
Confidence 65554432211 111111111111111110 11233443322111111 1111000 0011223444
Q ss_pred HHHHHHhcCCCe-EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeC----ChhhHHHHHHcchhcCCCC
Q 003682 670 DHLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGPS 744 (803)
Q Consensus 670 ~~l~~~l~~~~~-~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD----~~NDi~Mf~~ag~s~a~~~ 744 (803)
+.+.+.+.+..+ ...+|..++||+|+|+|||.||+.|+ ++++++|||| +.||++|++.-|.
T Consensus 160 ~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~------ 225 (245)
T PLN02423 160 SVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT------ 225 (245)
T ss_pred HHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc------
Confidence 555555544222 23445589999999999999999996 5899999999 8999999997654
Q ss_pred CCCCcceEEEEeCCCCccceeEeCCHhHHHHHHHHHH
Q 003682 745 LSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 781 (803)
Q Consensus 745 ~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~~l~ 781 (803)
.+.+ |.+++++.++|+++.
T Consensus 226 -------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 -------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred -------ceEE-----------eCCHHHHHHHHHHhc
Confidence 1222 567999999988763
No 65
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.86 E-value=2.8e-20 Score=206.23 Aligned_cols=274 Identities=18% Similarity=0.119 Sum_probs=189.9
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCC----CChhhhhcCCCcHHHHH-HHhcCCEEeccCHhh
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYRTLPIRDELLR-ALLNADLIGFHTFDY 206 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pf----P~~~~~~~lp~~~~il~-~ll~~dligf~~~~~ 206 (803)
+++..+| |+|++|+....+....+.+ ..+.|+.+.+|... +.............+.+ .+-.+|.+-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 5566777 8999997764444333333 34678888888422 11111000000111222 234578887777654
Q ss_pred HHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCccc
Q 003682 207 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDI 286 (803)
Q Consensus 207 ~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~ 286 (803)
.+.+... |. ...++.++|+|+|.+.|.+... ..+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeecc
Confidence 4444321 11 1235667899999887752110 134568999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 003682 287 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 366 (803)
Q Consensus 287 ~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~ 366 (803)
.||+..+++|+..+.+++|+++ |+++|. ++.. +++++++.+ .+..+.+.+.|.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~-------~~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARA-------LGLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHH-------cCCCCeEEECCCCCHHHHH
Confidence 9999999999999988888665 888873 2322 334444443 2233456778899999999
Q ss_pred HHHHhcccceeccc------ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC---CCCceeCC
Q 003682 367 AYYVIAECCLVTAV------RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIRVNP 437 (803)
Q Consensus 367 aly~~Adv~v~~S~------~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l---~~~~lvnP 437 (803)
.+|+.||++++||. .||||++++|||+| |.|+|+|+.+|..+.+ .+|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS-------------------GVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHc-------------------CCCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 59999999999999 6789999999998877 24899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHH
Q 003682 438 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 482 (803)
Q Consensus 438 ~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 482 (803)
.|+++++++|.++++. ++.+.......++++ ..+++..+++++.
T Consensus 321 ~d~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 9999999999999884 444555556666666 4588888887764
No 66
>PLN02949 transferase, transferring glycosyl groups
Probab=99.86 E-value=6e-20 Score=208.01 Aligned_cols=208 Identities=12% Similarity=0.134 Sum_probs=157.4
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 318 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~ 318 (803)
++.++++|+|.+.+... +. ....++++++++||+.+.||+..+|+||++++++.++-..++.|+++|.
T Consensus 244 ~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~ 311 (463)
T PLN02949 244 RIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGS 311 (463)
T ss_pred CeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeC
Confidence 45678889998766311 10 0013457899999999999999999999998875443222455998885
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCC
Q 003682 319 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 398 (803)
Q Consensus 319 ~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~ 398 (803)
.. .++..++.+++++++.+ .+....+.|.+.++.+++.++|+.||+++.||..||||++++|||||
T Consensus 312 ~~---~~~~~~~~~eL~~la~~-------l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~---- 377 (463)
T PLN02949 312 CR---NKEDEERLQKLKDRAKE-------LGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAA---- 377 (463)
T ss_pred CC---CcccHHHHHHHHHHHHH-------cCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHc----
Confidence 42 12222344555555555 23334566778899999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCceEEecccccccccC-C------CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccccc
Q 003682 399 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 471 (803)
Q Consensus 399 ~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~------~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~ 471 (803)
|.|+|++..+|..+.+ . .|++++ |++++|++|.++++++++++....++.++.+.+
T Consensus 378 ---------------G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~ 440 (463)
T PLN02949 378 ---------------GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANR 440 (463)
T ss_pred ---------------CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 6689999999875433 2 277774 899999999999998888777777777788888
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 003682 472 HDVAYWARSFLQDLERAC 489 (803)
Q Consensus 472 ~~~~~W~~~~l~~l~~~~ 489 (803)
++....++++++.+....
T Consensus 441 FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 441 FSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred cCHHHHHHHHHHHHHHHH
Confidence 999999999988877653
No 67
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.85 E-value=3e-20 Score=205.06 Aligned_cols=265 Identities=14% Similarity=0.090 Sum_probs=178.6
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHH-HHHhcCCEEeccCHhhHHHH
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-RALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il-~~ll~~dligf~~~~~~~~F 210 (803)
+++..+| |+|++|..+...++.++.+......+.+..|..+...+.+........+. ..+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3445566 99999999877777777666555566777887665443322111100011 11223565555444333332
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEEEEeecCccccc
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFK 288 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~iil~V~Rld~~K 288 (803)
... ....++.++|+|+|.+.|... +...+. .++.. .++++|+++||+++.|
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~~---~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRKK---RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhhH---HHHcCCCCCCEEEEEEecccccc
Confidence 210 112367789999999877532 111111 11211 5688999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 003682 289 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 368 (803)
Q Consensus 289 gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~al 368 (803)
|+..+++|+..+.+++|+++ ++++|. ++..+.+++.++ + .+..+.+.+.|. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~~----~-------~~~~~~v~~~g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKVK----E-------LGLEDKVIFLGV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHHH----h-------cCCCCcEEEecc--cCCHHHH
Confidence 99999999999999888765 888873 333334444333 2 233344555655 6789999
Q ss_pred HHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCC--CceeCCCCHHHHHHH
Q 003682 369 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG--AIRVNPWNIDAVAEA 446 (803)
Q Consensus 369 y~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~--~~lvnP~d~~~~a~a 446 (803)
|+.||++|+||..||||++++||||| |.|+|+|+.+|..+.+.+ +++..+.+++++|++
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~-------------------G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~ 324 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQAS-------------------GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEE 324 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHh-------------------CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHH
Confidence 99999999999999999999999999 678999999999988843 555656678999999
Q ss_pred HHHHhCCCHHHHHHHHHHhh
Q 003682 447 MDSALGVSDAEKQMRHEKHY 466 (803)
Q Consensus 447 i~~aL~~~~~er~~r~~~~~ 466 (803)
|.++++.+..++..+.....
T Consensus 325 i~~l~~~~~~~~~~~~~~~~ 344 (358)
T cd03812 325 ILKLKSEDRRERSSESIKKK 344 (358)
T ss_pred HHHHHhCcchhhhhhhhhhc
Confidence 99999988766554443333
No 68
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.85 E-value=1.1e-20 Score=221.16 Aligned_cols=282 Identities=14% Similarity=0.117 Sum_probs=182.4
Q ss_pred HhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEE-EEecCCCC---hhhhhcCCCcHHHHHHHhcCCEEeccC-HhhH
Q 003682 133 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGF-FLHSPFPS---SEIYRTLPIRDELLRALLNADLIGFHT-FDYA 207 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~-flH~pfP~---~~~~~~lp~~~~il~~ll~~dligf~~-~~~~ 207 (803)
++..+| |+|++|.+.-..+..+..+.. .+|+.+ .+|. +|. ++.++. ....+.+.+..++.+.+.+ .++.
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344567 999999998777766665543 455544 4564 222 111110 0011222333333332222 1222
Q ss_pred -HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-CCCEEEEeecCcc
Q 003682 208 -RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMD 285 (803)
Q Consensus 208 -~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~~~~iil~V~Rld 285 (803)
+.+.. .++ ....++.++|+|||++.|.+ .+........++... .+.++|++|||++
T Consensus 470 ~~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcC---------------CChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 22221 111 12246788999999988752 121111112222222 3467899999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 003682 286 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYER 365 (803)
Q Consensus 286 ~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l 365 (803)
+.||+..+++||.++++++|+++ |+++|.+ +.. +++++++.+ .+....+.|.|.. +++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~G-----~~~----~~L~~l~~~-------lgL~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGGG-----PLL----ESVREFAQR-------LGMGERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEccC-----cch----HHHHHHHHH-------cCCCCcEEEcCCc--chH
Confidence 99999999999999999999765 8888843 333 334444444 3344567777765 479
Q ss_pred HHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCH--
Q 003682 366 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI-- 440 (803)
Q Consensus 366 ~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~-- 440 (803)
..+|+.||+||+||.+||||++++|||+| |.|||+|+.+|..+.+. +|++|+|.|.
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~-------------------G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFS-------------------GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHc-------------------CCeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 99999999999999999999999999999 67899999999999883 4899998875
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHH
Q 003682 441 DAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQD 484 (803)
Q Consensus 441 ~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 484 (803)
++++++|.+++....... ...+..++++ +.+++...++++++.
T Consensus 647 ~~La~aL~~ll~~l~~~~-~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 647 PDVAEALARIHDMCAADP-GIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHHHHHHHhChhccH-HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 689999988886543222 2233455555 468888887777654
No 69
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.85 E-value=1.5e-19 Score=200.76 Aligned_cols=287 Identities=15% Similarity=0.126 Sum_probs=194.4
Q ss_pred HHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCC---CCeEEEEEecCCCChhhhhcCCCcH-HHHHHHhcCCEEe
Q 003682 125 NKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFN---RVKLGFFLHSPFPSSEIYRTLPIRD-ELLRALLNADLIG 200 (803)
Q Consensus 125 N~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~---~~~i~~flH~pfP~~~~~~~lp~~~-~il~~ll~~dlig 200 (803)
++.+.+.+ +..+| |+|++|.+....++.++..+.. +.++.+.+|-.-. .....-+... -+...+-.+|.+.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--~~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDI--TLVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCcc--ccccccccchHHHHHHHhhCCEEE
Confidence 34455444 45577 8999998776666666654322 6788888883211 0011111112 2233456789888
Q ss_pred ccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEE
Q 003682 201 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIV 277 (803)
Q Consensus 201 f~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~i 277 (803)
..+....+.+...+ + ...++.++|+|+|...|.... . ...++++ .++++
T Consensus 148 ~~s~~~~~~~~~~~----~----------------~~~~i~vi~n~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF----D----------------ITKEIEVIPNFVDEDRFRPKP-----D---EALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc----C----------------CcCCEEEecCCcCHhhcCCCc-----h---HHHHHhcCCCCCCeE
Confidence 88877665554311 1 112467889999987764211 1 1122333 46789
Q ss_pred EEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEec
Q 003682 278 MLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID 357 (803)
Q Consensus 278 il~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~ 357 (803)
++++||+.+.||+..+++|++++.++ +++ .|+++|.+ ++...+++. +.+ .+..+.+.+.
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~----~l~i~G~g-----~~~~~~~~~----~~~-------~~~~~~v~~~ 258 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPA----RLLLVGDG-----PERSPAERL----ARE-------LGLQDDVLFL 258 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCc----eEEEEcCC-----cCHHHHHHH----HHH-------cCCCceEEEe
Confidence 99999999999999999999988665 333 37777743 333333333 333 2222334455
Q ss_pred CCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCce
Q 003682 358 TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIR 434 (803)
Q Consensus 358 ~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~l 434 (803)
|.. +++..+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|++
T Consensus 259 g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~-------------------g~PvI~s~~~~~~e~i~~~~~G~~ 317 (371)
T cd04962 259 GKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMAC-------------------GVPVVASNAGGIPEVVKHGETGFL 317 (371)
T ss_pred cCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc-------------------CCCEEEeCCCCchhhhcCCCceEE
Confidence 543 57999999999999999999999999999999 67899999999988883 4899
Q ss_pred eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcc-cccCCHHHHHHHHHHHHHH
Q 003682 435 VNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 435 vnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 487 (803)
++|.|+++++++|.+++.. ++.+....+..++. ...+++...++++++.+++
T Consensus 318 ~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 318 VDVGDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred cCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999999999974 44555555556665 5668988888888776543
No 70
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.85 E-value=5.2e-20 Score=202.89 Aligned_cols=268 Identities=17% Similarity=0.221 Sum_probs=188.7
Q ss_pred HhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHH
Q 003682 133 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 212 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~ 212 (803)
++..+| |+|++|..+...+..++.+ ..+.|+.+.+|-.++....+ .. .+..+|.+-+.+....+.+.
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~------~~---~~~~~~~vi~~s~~~~~~~~- 140 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFRY------NA---IMARGDRVIAVSNFIADHIR- 140 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHHH------HH---HHHhcCEEEEeCHHHHHHHH-
Confidence 345566 9999998776555544443 34789999999776544311 12 23458888776654444333
Q ss_pred HHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccC
Q 003682 213 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 289 (803)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kg 289 (803)
...+. ...++.++|+|+|.+.|....... .....+++++ .++++|+++||+.+.||
T Consensus 141 ---~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 141 ---ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ---HhcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 11221 123567789999998875432211 1122244444 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 003682 290 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 369 (803)
Q Consensus 290 i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly 369 (803)
+..+++|+..+.+++|+++ |+++|.+. ..+.+.+.+.+.+.+. +..+.+.+.|. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~-------~~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRL-------GLQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHc-------CCcceEEEcCC--cccHHHHH
Confidence 9999999999988766554 88888543 2223444444444432 22233455555 67899999
Q ss_pred Hhcccceecc-cccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHH
Q 003682 370 VIAECCLVTA-VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 445 (803)
Q Consensus 370 ~~Adv~v~~S-~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ 445 (803)
+.||++++|| ..||||++++||||| |.|+|+|+.+|..+.+. +|++++|.|++++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~ 322 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAM-------------------GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQ 322 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhc-------------------CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHH
Confidence 9999999999 789999999999999 67899999999888773 489999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHhhccccc
Q 003682 446 AMDSALGVSDAEKQMRHEKHYRYVST 471 (803)
Q Consensus 446 ai~~aL~~~~~er~~r~~~~~~~v~~ 471 (803)
+|..++..+++++....++.++++.+
T Consensus 323 ~i~~~~~~~~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 323 ALDQILSLLPEGRAKMFAKARMCVET 348 (355)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 99988888888887777777766644
No 71
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.84 E-value=9.2e-20 Score=204.24 Aligned_cols=203 Identities=14% Similarity=0.110 Sum_probs=149.8
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhC---CCCCCcEEEEEEe
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQN---PSKRGKIVLVQIA 317 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~---p~~~~~v~lv~i~ 317 (803)
.++|+|+|.+.|.+....+ ..+.....+++.+|+++||+.+.||+..+++|++++.+++ |++ .|+++|
T Consensus 182 ~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~----~l~i~G 252 (392)
T cd03805 182 EVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNV----RLVIAG 252 (392)
T ss_pred ceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCe----EEEEEc
Confidence 4789999998886422111 0111112257789999999999999999999999998887 554 488888
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
.+... ..+..++.+++++++.+. .+....+.|.|.++.+++..+|+.||++++||..||||++++|||||
T Consensus 253 ~~~~~-~~~~~~~~~~l~~~~~~~------~~l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~--- 322 (392)
T cd03805 253 GYDPR-VAENVEYLEELQRLAEEL------LLLEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYA--- 322 (392)
T ss_pred CCCCC-CchhHHHHHHHHHHHHHh------cCCCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHc---
Confidence 54321 122234455555555441 12234566778999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCC
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHD 473 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~ 473 (803)
|.|+|+|+.+|..+.+. +|++++| |++++|++|.++++.+. .+....+..++++ ..++
T Consensus 323 ----------------G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s 384 (392)
T cd03805 323 ----------------GKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD-LADRMGAAGRKRVKEKFS 384 (392)
T ss_pred ----------------CCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhcC
Confidence 67899999999888883 3788877 99999999999998654 4455555566655 4578
Q ss_pred HHHHHHH
Q 003682 474 VAYWARS 480 (803)
Q Consensus 474 ~~~W~~~ 480 (803)
+..++++
T Consensus 385 ~~~~~~~ 391 (392)
T cd03805 385 TEAFAER 391 (392)
T ss_pred HHHHhhh
Confidence 7777654
No 72
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.84 E-value=4e-20 Score=209.82 Aligned_cols=203 Identities=14% Similarity=0.061 Sum_probs=134.5
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCC
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY 607 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~ 607 (803)
.+.+|+|++|+||||++ .+..+++.++++|++| +++|+.|++||||+...+..++..+. ..++|++||+.|+.++
T Consensus 413 ~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred CceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 46689999999999999 6667788999999998 89999999999999999999987763 3469999999999865
Q ss_pred ce-------------eEEeecCCCCccHHHHHHHHHHHHhhcCC----------CceEeeccceEEEe----eccC----
Q 003682 608 GV-------------DWETCVSVPDFSWKQIAEPVMKLYTETTD----------GSTIETKESALVWN----FQYA---- 656 (803)
Q Consensus 608 ~~-------------~~~~~~~~~~~~~~~~~~~i~~~y~~~~~----------g~~ie~k~~~~~~~----~~~~---- 656 (803)
+. .+.... ..+ .+.+.++++...+... ..++.... ..... +...
T Consensus 489 ~~~~~~~~~~~~~~~~iI~~~-~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~ 563 (694)
T PRK14502 489 DYFRLPFAYDRVAGNYLVIEL-GMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQ 563 (694)
T ss_pred CcccccccccccCCCeEEEEc-CCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHH
Confidence 41 010000 111 1223333332222110 11111110 00000 0000
Q ss_pred ----C-----CccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEE--eC
Q 003682 657 ----D-----PDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCI--GD 725 (803)
Q Consensus 657 ----d-----~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~--GD 725 (803)
. ..+-.....+.++.+.+.+......+..++.++||+ +++|||.|++++++.+ +++.+++++| ||
T Consensus 564 a~~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGD 639 (694)
T PRK14502 564 AELAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGD 639 (694)
T ss_pred HHHHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCC
Confidence 0 000000012234444444544456666799999999 5999999999999999 9999999999 99
Q ss_pred ChhhHHHHHHcchhcCCCC
Q 003682 726 DRSDEDMFEVIKSAAAGPS 744 (803)
Q Consensus 726 ~~NDi~Mf~~ag~s~a~~~ 744 (803)
+.||++||+.+|.+++|++
T Consensus 640 s~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 640 SENDYSMLETVDSPILVQR 658 (694)
T ss_pred cHhhHHHHHhCCceEEEcC
Confidence 9999999999998766654
No 73
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.84 E-value=2.9e-19 Score=201.87 Aligned_cols=282 Identities=16% Similarity=0.166 Sum_probs=191.2
Q ss_pred CeEEEeCccccc-hHHHHHhhCCCCeEEEEEecCCCChhhhhc-CC--CcH----HHHH-HHhcCCEEeccCHhhHHHHH
Q 003682 141 DFVWVHDYHLMV-LPTFLRKRFNRVKLGFFLHSPFPSSEIYRT-LP--IRD----ELLR-ALLNADLIGFHTFDYARHFL 211 (803)
Q Consensus 141 d~iwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~~~~~~-lp--~~~----~il~-~ll~~dligf~~~~~~~~Fl 211 (803)
|+|++|...+.. ...++-.+..+.|+.+..|.-||..-.-.. .+ ... .+.+ .+-.+|.|...+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 999999766543 233333344456788877866653311100 10 000 1111 13357888777776665543
Q ss_pred HHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCccccc
Q 003682 212 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFK 288 (803)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~K 288 (803)
. .+ ....++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 12236778999999988863211 1122345555 3568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 003682 289 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 368 (803)
Q Consensus 289 gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~al 368 (803)
|+..+++|++++ +++|+ +.|+++|. ++..++++ +++.+ .+... +.|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~~~l~----~~~~~-------~~l~~-v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGKARLE----KMAQC-------RGLPN-VHFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhHHHHH----HHHHH-------cCCCc-eEEeCCCCHHHHHHH
Confidence 999999999876 44555 44888873 34333333 33333 22233 456678999999999
Q ss_pred HHhcccceecccccCCCCC----ceeeeeeecCCcccccccCCCCCCCCCceEEecccccc--cccC-CCCceeCCCCHH
Q 003682 369 YVIAECCLVTAVRDGMNLI----PYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--SPSL-SGAIRVNPWNID 441 (803)
Q Consensus 369 y~~Adv~v~~S~~EG~~lv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~--~~~l-~~~~lvnP~d~~ 441 (803)
|+.||++++||..|+++++ ..||||| |.|+|+|+.+|. .+.+ .+|++++|.|++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~-------------------G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~ 361 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS-------------------GRNVVATAEPGTELGQLVEGIGVCVEPESVE 361 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc-------------------CCCEEEEeCCCchHHHHHhCCcEEeCCCCHH
Confidence 9999999999999996654 5899999 677999988774 3545 569999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhhcccc-cCCHHHHHHHHHHHHHHHH
Q 003682 442 AVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQDLERAC 489 (803)
Q Consensus 442 ~~a~ai~~aL~~~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~ 489 (803)
++|++|.++++++ +++....+..++++. .+++...++++++.+++..
T Consensus 362 ~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 362 ALVAAIAALARQA-LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999999998754 555666667777765 5899999999988887653
No 74
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.84 E-value=1.4e-19 Score=199.41 Aligned_cols=275 Identities=20% Similarity=0.187 Sum_probs=197.8
Q ss_pred cCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChh--hhhc---CCCcHHHHHHHhcCCEEeccCHhhHHHH
Q 003682 136 ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYRT---LPIRDELLRALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 136 ~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~--~~~~---lp~~~~il~~ll~~dligf~~~~~~~~F 210 (803)
.++ |+||+|.+..... +..+.|+.+.+|-.+|... .+.. ...+.-+...+..+|.+.+.+....+.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 455 9999998877766 4567899999997655321 1110 1122333445667888888877666555
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCH
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi 290 (803)
.... +. ...++.++|+|+|...+.... . +. ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~~----~-~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPPA----E-AE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCCc----h-HH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 11 122566789999988764211 1 11 1112223577899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|+..+.+++|+.+ |+++|... .........++ + .+..+.+.+.|.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARLR----E-------LGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHHH----H-------cCCCCeEEECCCCChhHHHHHHh
Confidence 999999999998887554 88887433 11112222221 1 23345677888999999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~ 449 (803)
.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+ .+|++++|.|.++++++|.+
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~-------------------G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 332 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMAC-------------------GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIER 332 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcC-------------------CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHH
Confidence 999999999999999999999999 6779999998888877 56899999999999999999
Q ss_pred HhCCCHHHHHHHHHHhhcccccCCHHHHHHHHH
Q 003682 450 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 482 (803)
Q Consensus 450 aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l 482 (803)
+++ +++.+....+..++...+++++.++++++
T Consensus 333 l~~-~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 333 LLE-DPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred Hhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 986 45555555666667788899999998775
No 75
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.83 E-value=3.4e-19 Score=203.79 Aligned_cols=278 Identities=14% Similarity=0.118 Sum_probs=182.5
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcC--CC--------cHHHHHHH
Q 003682 124 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL--PI--------RDELLRAL 193 (803)
Q Consensus 124 vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~l--p~--------~~~il~~l 193 (803)
.=+.|.+.+ . .. +.|+|.++--.... +.++ +..+.+++...+|.-. |... +. -+..++.+
T Consensus 199 l~~~f~~~L-~-~~-~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h-----~~~~~~~~~~~~~~~~y~~~~~~~ 268 (500)
T TIGR02918 199 LIAYFLKQL-N-LT-KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEH-----FSESATNETYILWNNYYEYQFSNA 268 (500)
T ss_pred HHHHHHHHH-h-CC-CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhh-----hcCccCcchhHHHHHHHHHHHhch
Confidence 334455554 2 22 34888887555433 3444 5566899999999432 1110 11 11122333
Q ss_pred hcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhC
Q 003682 194 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFK 273 (803)
Q Consensus 194 l~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~ 273 (803)
-.+|.+-..|....+........ +.+...++.++|+|++...+. +. ...
T Consensus 269 ~~~D~iI~~S~~~~~~l~~~~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r 317 (500)
T TIGR02918 269 DYIDFFITATDIQNQILKNQFKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QER 317 (500)
T ss_pred hhCCEEEECCHHHHHHHHHHhhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------ccc
Confidence 34566665555433332221111 112233567889998754332 10 012
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
.+..|++|||+.+.||+..+++|+.++.+++|+++ |+++|. +++.+ ++++++.+. +....
T Consensus 318 ~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~----l~i~G~-----G~~~~----~l~~~i~~~-------~l~~~ 377 (500)
T TIGR02918 318 KPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELT----FDIYGE-----GGEKQ----KLQKIINEN-------QAQDY 377 (500)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeE----EEEEEC-----chhHH----HHHHHHHHc-------CCCCe
Confidence 34689999999999999999999999999999765 888873 34333 344444442 22344
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccc-cccccCC--
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSLS-- 430 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~-G~~~~l~-- 430 (803)
+.+.|.. ++..+|+.||++|+||.+||||++++||||| |.|+|+|+.. |..+.+.
T Consensus 378 V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~-------------------G~PVI~~dv~~G~~eiI~~g 435 (500)
T TIGR02918 378 IHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGS-------------------GLGMIGFDVNYGNPTFIEDN 435 (500)
T ss_pred EEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHh-------------------CCCEEEecCCCCCHHHccCC
Confidence 5677654 5788999999999999999999999999999 6789999986 7777773
Q ss_pred -CCceeCC----CC----HHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 431 -GAIRVNP----WN----IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 431 -~~~lvnP----~d----~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
+|++|++ .| ++++|++|.++++ +..+....+..++..+++++..-++++.+-++
T Consensus 436 ~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 436 KNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred CCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 4899974 33 8899999999994 44566666677777788888888877776554
No 76
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.83 E-value=6.2e-19 Score=198.50 Aligned_cols=270 Identities=13% Similarity=0.096 Sum_probs=187.7
Q ss_pred CCCCeEEEeCccccc-hHHHHHhhCCCCeEEEEEecCCCChhhhhcC--CCcHHHHH-HHhcCCEEeccCHhhHHHHHHH
Q 003682 138 PDDDFVWVHDYHLMV-LPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL--PIRDELLR-ALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 138 ~~~d~iwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~~~~~~l--p~~~~il~-~ll~~dligf~~~~~~~~Fl~~ 213 (803)
++.|+++.|-++... ...++.++....++....|- .+++... +....+.+ .+-.+|.|.+.+....+.+..
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg----~d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~- 200 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHG----YDLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK- 200 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEecc----chhhhhhccccchHHHHHHHhcCCEEEECCHHHHHHHHH-
Confidence 334777776555433 33456666655568888883 2222111 11111222 234689998887766554432
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 293 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~ 293 (803)
..+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 201 ---~~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 201 ---RYP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ---HCC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 111 112356788999998765321 011356789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh--
Q 003682 294 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI-- 371 (803)
Q Consensus 294 l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~-- 371 (803)
++|+.++.+++|+.. +.++.+|. ++..+++++.+ .+ .+..+.+.+.|.++.+++.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l~~~~----~~-------~~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDTLKELA----ES-------KPENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHHHHHHH----Hh-------cCCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999988764 66776763 34433444433 22 112245677889999999999986
Q ss_pred cccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCC---CceeCC-CCHHHHHHHH
Q 003682 372 AECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNP-WNIDAVAEAM 447 (803)
Q Consensus 372 Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~---~~lvnP-~d~~~~a~ai 447 (803)
||+|+.||..||||++++||||| |.|+|+|+.+|..+.+.+ |++++| .|+++++++|
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~-------------------G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I 371 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSF-------------------GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSL 371 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHc-------------------CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHH
Confidence 68899999999999999999999 678999999999998843 688876 4899999999
Q ss_pred HHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 482 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 482 (803)
.++++ +++.+....++.++++ .++++..+.++|+
T Consensus 372 ~~ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 372 SKFID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99998 5556666666777666 4588888887775
No 77
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.83 E-value=1.3e-20 Score=211.22 Aligned_cols=187 Identities=11% Similarity=0.024 Sum_probs=127.6
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecC-c-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDD-M-DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 315 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~R-l-d~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 315 (803)
.++.++|+|||++.+..... . ...+ ...++++|++++| + ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~---~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAE---L----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccc---c----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 36788999999754321100 0 0001 1246788999999 4 4789999999999875 23 356888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeee
Q 003682 316 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 316 i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~ 395 (803)
+|.+. +. .. ..+.++....+.+++..+|+.||+||+||..||||+|++|||||
T Consensus 277 vG~g~----~~---~~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~- 329 (405)
T PRK10125 277 FGKFS----PF---TA-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI- 329 (405)
T ss_pred EcCCC----cc---cc-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-
Confidence 88432 10 00 01333332346789999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCceEEecccccccccCC--CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcc-cccC
Q 003682 396 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY-VSTH 472 (803)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~--~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~-v~~~ 472 (803)
|.|||+|+.+|+.+.+. +|++|+|.|++++|+++...+... .........++. ...+
T Consensus 330 ------------------G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~f 389 (405)
T PRK10125 330 ------------------GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAY 389 (405)
T ss_pred ------------------CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhC
Confidence 67899999999988883 599999999999998653322100 000011223333 4558
Q ss_pred CHHHHHHHHHHHHH
Q 003682 473 DVAYWARSFLQDLE 486 (803)
Q Consensus 473 ~~~~W~~~~l~~l~ 486 (803)
+....++++++-..
T Consensus 390 s~~~~~~~y~~lY~ 403 (405)
T PRK10125 390 SGQQMLEEYVNFYQ 403 (405)
T ss_pred CHHHHHHHHHHHHH
Confidence 88888888876543
No 78
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.82 E-value=4.5e-19 Score=195.01 Aligned_cols=273 Identities=17% Similarity=0.180 Sum_probs=181.0
Q ss_pred CeEEEeCccc-cchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHH------HHHHhcCCEEeccCHhhHHHHHHH
Q 003682 141 DFVWVHDYHL-MVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDEL------LRALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 141 d~iwihDyhl-~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~i------l~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
|+|++|+... ...+.....+..+.++.+..|-.++...... -+.+..+ ...+-.+|.+.+.+.........
T Consensus 89 dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~- 166 (375)
T cd03821 89 DIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR- 166 (375)
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-
Confidence 9999998432 2222222222346789999997665433100 0001000 11123355665555332222111
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi 290 (803)
.....++.++|+|+|.+.|.... ... . ++.+ .++++|+++||+++.||+
T Consensus 167 --------------------~~~~~~~~vi~~~~~~~~~~~~~---~~~--~---~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 167 --------------------LGLKAPIAVIPNGVDIPPFAALP---SRG--R---RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred --------------------hCCcccEEEcCCCcChhccCcch---hhh--h---hhhccCCCCCcEEEEEeCcchhcCH
Confidence 11223677899999998875321 110 0 2222 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|+.++.+++|+++ |+++|... ..+. ..++.++.+ .+..+.+.+.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~~---~~~~~~~~~-------~~~~~~v~~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDWH----LVIAGPDE----GGYR---AELKQIAAA-------LGLEDRVTFTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCeE----EEEECCCC----cchH---HHHHHHHHh-------cCccceEEEcCCCChHHHHHHHh
Confidence 999999999998888765 88888432 1221 122222222 23345567788999999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC--CCceeCCCCHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAEAMD 448 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~--~~~lvnP~d~~~~a~ai~ 448 (803)
.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|+++ |.+.++++++|.
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~ 340 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALAC-------------------GTPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALR 340 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhc-------------------CCCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHH
Confidence 999999999999999999999999 67899999999888883 35555 456699999999
Q ss_pred HHhCCCHHHHHHHHHHhhcc-cccCCHHHHHHHHH
Q 003682 449 SALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFL 482 (803)
Q Consensus 449 ~aL~~~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 482 (803)
++++++ +++....+..+++ .+.+++...+++++
T Consensus 341 ~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 341 RALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999976 5555556666666 56688887777664
No 79
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.82 E-value=4.6e-19 Score=195.31 Aligned_cols=283 Identities=18% Similarity=0.172 Sum_probs=189.4
Q ss_pred HhhcCCCCCeEEEeCccccc---hHHHHHh--hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhH
Q 003682 133 MEVISPDDDFVWVHDYHLMV---LPTFLRK--RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYA 207 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~l---lp~~lr~--~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~ 207 (803)
++..+| |+|++|+.+-.. ....+.. +..+.|+.+.+|.+.|....+. ...-....+-.+|.|-+.+.+.+
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~ 146 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELL 146 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHH
Confidence 344566 899998733111 1111111 2367899999998622221111 11111223446898888764555
Q ss_pred HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccc
Q 003682 208 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 287 (803)
Q Consensus 208 ~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~ 287 (803)
+.+.... ...++.++|+|+|...+.... .. +......++++|+++||+.+.
T Consensus 147 ~~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~~------~~--~~~~~~~~~~~i~~~G~~~~~ 197 (366)
T cd03822 147 RALLLRA---------------------YPEKIAVIPHGVPDPPAEPPE------SL--KALGGLDGRPVLLTFGLLRPY 197 (366)
T ss_pred HHHHhhc---------------------CCCcEEEeCCCCcCcccCCch------hh--HhhcCCCCCeEEEEEeeccCC
Confidence 5544310 023667889999987654211 11 111122567899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc-EEEecCCCCHHHHH
Q 003682 288 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP-VVLIDTPLQFYERI 366 (803)
Q Consensus 288 Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~-v~~~~~~~~~~~l~ 366 (803)
||+..+++|++.+.+++|+++ |+++|... +..........+++.+ .+..+ |.+..+.++.+++.
T Consensus 198 K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~-------~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 198 KGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAER-------LGLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHh-------cCCCCcEEEecCcCCHHHHH
Confidence 999999999999998887655 88887432 1111111110012222 22233 44444459999999
Q ss_pred HHHHhcccceeccccc--CCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC---CCCceeCCCCHH
Q 003682 367 AYYVIAECCLVTAVRD--GMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIRVNPWNID 441 (803)
Q Consensus 367 aly~~Adv~v~~S~~E--G~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l---~~~~lvnP~d~~ 441 (803)
.+|+.||++++||..| |++++++|||+| |.|+|+|+.+| .+.+ ..|+++++.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~-------------------G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGF-------------------GKPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHc-------------------CCCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 999999999999 66799999988 6666 348999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 442 AVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 442 ~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
+++++|.++++.+ +.+....+..++++.++++..+++++.+.+
T Consensus 323 ~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9999999999854 445556667777888899999999887654
No 80
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.82 E-value=1.1e-18 Score=191.98 Aligned_cols=274 Identities=16% Similarity=0.165 Sum_probs=192.2
Q ss_pred HHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhh
Q 003682 127 IFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDY 206 (803)
Q Consensus 127 ~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~ 206 (803)
.++..+ +..++ |+|++|..+...+..++..+....+..+.+|.+-. +... ....+...+-.+|.+-..+...
T Consensus 70 ~~~~~~-~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~vi~~s~~~ 141 (355)
T cd03799 70 VLAREL-RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI----FRSP-DAIDLDEKLARADFVVAISEYN 141 (355)
T ss_pred HHHHHH-HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc----cccC-chHHHHHHHhhCCEEEECCHHH
Confidence 344433 34556 99999987666666666665557888888884321 1111 1123334455789998888766
Q ss_pred HHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCccc
Q 003682 207 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDI 286 (803)
Q Consensus 207 ~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~ 286 (803)
.+.+... .+ ....++.++|+|+|.+.|.... .....++..|+++||+.+
T Consensus 142 ~~~l~~~----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~ 190 (355)
T cd03799 142 RQQLIRL----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVE 190 (355)
T ss_pred HHHHHHh----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeecc
Confidence 6655431 11 1223677899999988775221 111245678999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 003682 287 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 366 (803)
Q Consensus 287 ~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~ 366 (803)
.||+..+++|++.+.+++|++ .|+++|.. +...++++. +.+ .+..+.+.+.|.++.+++.
T Consensus 191 ~k~~~~l~~~~~~l~~~~~~~----~l~i~G~~-----~~~~~~~~~----~~~-------~~~~~~v~~~g~~~~~~l~ 250 (355)
T cd03799 191 KKGLDYLLEALALLKDRGIDF----RLDIVGDG-----PLRDELEAL----IAE-------LGLEDRVTLLGAKSQEEVR 250 (355)
T ss_pred ccCHHHHHHHHHHHhhcCCCe----EEEEEECC-----ccHHHHHHH----HHH-------cCCCCeEEECCcCChHHHH
Confidence 999999999999988776654 48877743 222333333 333 2334567788899999999
Q ss_pred HHHHhcccceecccc------cCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCC
Q 003682 367 AYYVIAECCLVTAVR------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNP 437 (803)
Q Consensus 367 aly~~Adv~v~~S~~------EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP 437 (803)
.+|+.||++++||.. ||||++++|||+| |.|+|+|+.+|..+.+. .|++++|
T Consensus 251 ~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~i~~~~~g~~~~~ 311 (355)
T cd03799 251 ELLRAADLFVLPSVTAADGDREGLPVVLMEAMAM-------------------GLPVISTDVSGIPELVEDGETGLLVPP 311 (355)
T ss_pred HHHHhCCEEEecceecCCCCccCccHHHHHHHHc-------------------CCCEEecCCCCcchhhhCCCceEEeCC
Confidence 999999999999999 9999999999999 67799999988887773 4899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccc-cCCHHHHHH
Q 003682 438 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWAR 479 (803)
Q Consensus 438 ~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~-~~~~~~W~~ 479 (803)
.|+++++++|.++++.+.. +....+..++.+. .+++...++
T Consensus 312 ~~~~~l~~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 312 GDPEALADAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred CCHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 9999999999999986544 4445555555553 466655543
No 81
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.81 E-value=1.1e-18 Score=190.55 Aligned_cols=286 Identities=19% Similarity=0.140 Sum_probs=199.9
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhh----cCCCcHHHHHHHhcCCEEeccCHhhH
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR----TLPIRDELLRALLNADLIGFHTFDYA 207 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~----~lp~~~~il~~ll~~dligf~~~~~~ 207 (803)
+++..++ |+|++|+++...+.. +..+.++.++.+.+|.++|...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3444566 999999999887776 4445568899999998887543211 00111122233445788877776665
Q ss_pred HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccc
Q 003682 208 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 287 (803)
Q Consensus 208 ~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~ 287 (803)
+.+... +.....++.++|+|+|...+.... ...........+++.|+++||+.+.
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPAP------RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCccc------hHHHhhcCCcCCCeEEEEecchhhh
Confidence 555431 001113677889999988764211 0011111112457899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 003682 288 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 367 (803)
Q Consensus 288 Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~a 367 (803)
||+..+++|+..+.+++|+++ |+++|. ++....+++.++ + .+..+.+.+.+.++.+++..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREELEALAA----E-------LGLGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHHHHHHHH----H-------hCCCcceEEEeccChhhHHH
Confidence 999999999999988876544 887772 233333433332 2 12233556778899999999
Q ss_pred HHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHH
Q 003682 368 YYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVA 444 (803)
Q Consensus 368 ly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a 444 (803)
+|+.||+++.||..||+|++++|||+| |.|+|+++.+|..+.+. .|+++++.|+++++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 332 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAA-------------------GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALA 332 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHc-------------------CCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHH
Confidence 999999999999999999999999999 67899999999888884 48999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHhh-cccccCCHHHHHHHHHHHH
Q 003682 445 EAMDSALGVSDAEKQMRHEKHY-RYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 445 ~ai~~aL~~~~~er~~r~~~~~-~~v~~~~~~~W~~~~l~~l 485 (803)
++|.++++.+... ....+..+ .....+++..+++++++.+
T Consensus 333 ~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 333 EAILRLLDDPELR-RRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHcChHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 9999999865443 33344444 4566789999998887654
No 82
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.81 E-value=1.2e-18 Score=191.53 Aligned_cols=274 Identities=17% Similarity=0.145 Sum_probs=189.9
Q ss_pred hhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc----HHHHH-HHhcCCEEeccCHhhHH
Q 003682 134 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR----DELLR-ALLNADLIGFHTFDYAR 208 (803)
Q Consensus 134 ~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~----~~il~-~ll~~dligf~~~~~~~ 208 (803)
+..+| |+|++|.............+..+.|+.+.+|..||........... ..+.+ ..-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55677 8999996654333333333345688999999887743221111111 11222 23357777777765554
Q ss_pred HHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEEEEeecCccc
Q 003682 209 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDI 286 (803)
Q Consensus 209 ~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~iil~V~Rld~ 286 (803)
.+.. .. ...+.++|+|+|.+.|.+.... ...++.+ .++++|+++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEecccc
Confidence 2221 00 1245678999999877532211 1112222 45788999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 003682 287 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 366 (803)
Q Consensus 287 ~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~ 366 (803)
.||+..+++|++.+.++ |+++ |+++|.. ++...++ . ..+-+.+.|.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~~-----~~~~~~~--------~---------~~~~v~~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGDG-----PARARLE--------A---------RYPNVHFLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeCC-----chHHHHh--------c---------cCCcEEEEeccCHHHHH
Confidence 99999999999998876 6654 8888732 2222222 0 01234566678999999
Q ss_pred HHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHH
Q 003682 367 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAV 443 (803)
Q Consensus 367 aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~ 443 (803)
.+|+.||+++.||..||||++++||||| |.|+|+|+.+|..+.+. .|++++|.|.+++
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l 322 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMAS-------------------GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAF 322 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHc-------------------CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHH
Confidence 9999999999999999999999999999 67899999999988884 4899999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 444 AEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 444 a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
+++|.++++.+ +.+....+..++.+..+++..+++++++.+
T Consensus 323 ~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 323 AAALAALLADP-ELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHcCH-HHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999999744 455555666677777899999988887654
No 83
>PHA01633 putative glycosyl transferase group 1
Probab=99.81 E-value=1.6e-19 Score=194.36 Aligned_cols=193 Identities=17% Similarity=0.172 Sum_probs=140.8
Q ss_pred ecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 003682 243 LPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 322 (803)
Q Consensus 243 ~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~ 322 (803)
+|.|||++.|.+... ...+..+++...+++..+|++|||+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 567999998863210 01111222222235678899999999999999999999999999998766677776651
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCcc-cEEEec--CCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCc
Q 003682 323 RGRDVQEVQSETHATVRRINKIFGRPGYQ-PVVLID--TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 399 (803)
Q Consensus 323 ~~~~~~~l~~~v~~lv~~in~~~~~~~~~-~v~~~~--~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~ 399 (803)
. .+ .+ .+.. .|.+.. |.++.+++.++|+.||+||+||..||||++++|||||
T Consensus 192 --~---~~----~~-----------l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~----- 246 (335)
T PHA01633 192 --K---QF----TQ-----------LEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM----- 246 (335)
T ss_pred --H---HH----HH-----------cCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----
Confidence 1 11 11 1111 244443 6778999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCceEEecccccccccCCC---------------------CceeCCCCHHHHHHHHHHHhCCCHHHH
Q 003682 400 KLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---------------------AIRVNPWNIDAVAEAMDSALGVSDAEK 458 (803)
Q Consensus 400 ~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~---------------------~~lvnP~d~~~~a~ai~~aL~~~~~er 458 (803)
|.|+|+|+.+|..|..++ |++++++|++++|++|.+++.+...+
T Consensus 247 --------------G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~- 311 (335)
T PHA01633 247 --------------GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE- 311 (335)
T ss_pred --------------CCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh-
Confidence 678999999887775331 45788899999999999998776432
Q ss_pred HHHHHHhhcccccCCHHHHHHHHH
Q 003682 459 QMRHEKHYRYVSTHDVAYWARSFL 482 (803)
Q Consensus 459 ~~r~~~~~~~v~~~~~~~W~~~~l 482 (803)
.+...+++..+++++..-.++++
T Consensus 312 -~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 312 -ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred -hhhHHHHHHHHhcCHHHHHHHhh
Confidence 23445567777788887777664
No 84
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.81 E-value=8.9e-19 Score=192.81 Aligned_cols=270 Identities=18% Similarity=0.228 Sum_probs=184.0
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCC---CcH----HH-HHHHhcCCEEeccC
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP---IRD----EL-LRALLNADLIGFHT 203 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp---~~~----~i-l~~ll~~dligf~~ 203 (803)
+++..+| |+|++|+............+..+.++.+.+|.+|+....+.... ... .+ ...+-.+|.+-..+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3455666 89999987555444444444457899999998876332111111 000 11 12234578777766
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEe
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLG 280 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~ 280 (803)
......+.. . +...++.++|+|+|...+..... .. .++.+ .+++.|++
T Consensus 157 ~~~~~~~~~-----~----------------~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE-----Y----------------GVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh-----c----------------CCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEE
Confidence 654433321 0 11124678899999887753211 11 12222 45788999
Q ss_pred ecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC
Q 003682 281 VDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 360 (803)
Q Consensus 281 V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~ 360 (803)
+||+.+.||+..+++|++.+.++.|+++ |+++|.+ +... .+++++.+. +..+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~~-----~~~~----~~~~~~~~~-------~~~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGDG-----PERE----ELEELAREL-------GLADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeCC-----chHH----HHHHHHHHc-------CCCCcEEEeccC
Confidence 9999999999999999999988766554 8888732 2222 233333332 223456677899
Q ss_pred CHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCC
Q 003682 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNP 437 (803)
Q Consensus 361 ~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP 437 (803)
+.+++..+|+.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. +|+++++
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~ 328 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAA-------------------GLPVVAVDAPGLPDLVADGENGFLFPP 328 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHc-------------------CCcEEEeCCCChhhheecCceeEEeCC
Confidence 9999999999999999999999999999999999 67899999999888873 4899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCC
Q 003682 438 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHD 473 (803)
Q Consensus 438 ~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~ 473 (803)
.|. +++++|.++++++... +...+..++++.+++
T Consensus 329 ~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 329 GDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 888 9999999999876543 445555666665554
No 85
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.81 E-value=1.7e-19 Score=203.47 Aligned_cols=266 Identities=12% Similarity=0.058 Sum_probs=165.7
Q ss_pred hhcCCCCCeEEEeCccccchH---HHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHH
Q 003682 134 EVISPDDDFVWVHDYHLMVLP---TFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 134 ~~~~~~~d~iwihDyhl~llp---~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~F 210 (803)
...+| |+|++|..-.+... ....+++ + ++...+||.||.+--+..+.. ++.++ ..++.+|
T Consensus 431 ~~f~P--DVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~eYl~~y~~g~----L~~~l---------lk~l~~~ 493 (794)
T PLN02501 431 PSKDA--DIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEYIKREKNGA----LQAFF---------VKHINNW 493 (794)
T ss_pred hccCC--CEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHHHHhHhcchh----HHHHH---------HHHHHHH
Confidence 44567 99999988444433 3333333 3 699999999996432222211 11111 1133334
Q ss_pred HHH--HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcc
Q 003682 211 LSC--CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMD 285 (803)
Q Consensus 211 l~~--~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld 285 (803)
+.. |.+++.++..... + . +. .+. ..+|||++.|.+... . ... ..+ ...+.+++||||.
T Consensus 494 v~r~hcD~VIaPS~atq~----L--~-~~-vI~-nVnGVDte~F~P~~r---~----~~~-r~lgi~~~~kgiLfVGRLa 556 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQD----L--P-KS-VIC-NVHGVNPKFLKIGEK---V----AEE-RELGQQAFSKGAYFLGKMV 556 (794)
T ss_pred HHHhhCCEEEcCCHHHHH----h--c-cc-cee-ecccccccccCCcch---h----HHH-HhcCCccccCceEEEEccc
Confidence 443 6666665532221 1 1 11 111 125999998874321 1 111 122 1224589999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 003682 286 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYER 365 (803)
Q Consensus 286 ~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l 365 (803)
+.||+..+|+|+..+.++.|+++ |+++| +|++.+++++.+. +.+ . .+++ .|.. ++.
T Consensus 557 ~EKGld~LLeAla~L~~~~pnvr----LvIVG-----DGP~reeLe~la~----eLg-------L-~V~F-LG~~--dd~ 612 (794)
T PLN02501 557 WAKGYRELIDLLAKHKNELDGFN----LDVFG-----NGEDAHEVQRAAK----RLD-------L-NLNF-LKGR--DHA 612 (794)
T ss_pred ccCCHHHHHHHHHHHHhhCCCeE----EEEEc-----CCccHHHHHHHHH----HcC-------C-EEEe-cCCC--CCH
Confidence 99999999999999888877654 88887 4555445544443 322 2 2444 4443 345
Q ss_pred HHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC--CCceeCCCCHHHH
Q 003682 366 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAV 443 (803)
Q Consensus 366 ~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~--~~~lvnP~d~~~~ 443 (803)
..+|+.+||||+||.+||||+|++||||| |.|||+++.+|...... +|++ +.|.+++
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~-------------------GlPVVATd~pG~e~V~~g~nGll--~~D~Eaf 671 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAM-------------------GKFVVCADHPSNEFFRSFPNCLT--YKTSEDF 671 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCCEEEecCCCCceEeecCCeEe--cCCHHHH
Confidence 58999999999999999999999999999 67899999988543222 3443 4789999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHH
Q 003682 444 AEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 484 (803)
Q Consensus 444 a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 484 (803)
+++|.++|..++. +... .. ...+++..-++++++.
T Consensus 672 AeAI~~LLsd~~~-rl~~-~a----~~~~SWeAaadrLle~ 706 (794)
T PLN02501 672 VAKVKEALANEPQ-PLTP-EQ----RYNLSWEAATQRFMEY 706 (794)
T ss_pred HHHHHHHHhCchh-hhHH-HH----HhhCCHHHHHHHHHHh
Confidence 9999999997653 2111 11 2256777777776654
No 86
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.81 E-value=5e-19 Score=196.98 Aligned_cols=281 Identities=16% Similarity=0.086 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCC---ChhhhhcC-CCcHHHHHHHhc
Q 003682 120 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP---SSEIYRTL-PIRDELLRALLN 195 (803)
Q Consensus 120 ~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP---~~~~~~~l-p~~~~il~~ll~ 195 (803)
...++-+.|-+.+.. .+. .|+|.+|-.+.... .+.......+...++|...- .......+ ...+.++..+-.
T Consensus 82 ~~~~l~~~~l~~l~~-~~~-~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (372)
T cd04949 82 NEEELFAFFLDELNK-DTK-PDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDK 157 (372)
T ss_pred CHHHHHHHHHHHHhc-CCC-CCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhh
Confidence 344455555555544 232 48999987776655 23333345566777774321 11000000 112344455567
Q ss_pred CCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCC
Q 003682 196 ADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQ 275 (803)
Q Consensus 196 ~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~ 275 (803)
+|.+.+.+..-.+.+.... +. ..++.++|+|++.+.+.... .....+
T Consensus 158 ~d~ii~~s~~~~~~l~~~~----~~----------------~~~v~~ip~g~~~~~~~~~~-------------~~~~~~ 204 (372)
T cd04949 158 VDGVIVATEQQKQDLQKQF----GN----------------YNPIYTIPVGSIDPLKLPAQ-------------FKQRKP 204 (372)
T ss_pred CCEEEEccHHHHHHHHHHh----CC----------------CCceEEEcccccChhhcccc-------------hhhcCC
Confidence 8888887776665554311 10 01267899999988765210 011345
Q ss_pred EEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003682 276 IVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 355 (803)
Q Consensus 276 ~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~ 355 (803)
..|+++||+.+.||+..+++|+.++.+++|+++ |+++|.+. ....+...+ .+ .+....+.
T Consensus 205 ~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g~-----~~~~~~~~~----~~-------~~~~~~v~ 264 (372)
T cd04949 205 HKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYGD-----EEEKLKELI----EE-------LGLEDYVF 264 (372)
T ss_pred CeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeCc-----hHHHHHHHH----HH-------cCCcceEE
Confidence 689999999999999999999999999999876 88787432 223333332 22 22334556
Q ss_pred ecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccc-cccccCC---C
Q 003682 356 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSLS---G 431 (803)
Q Consensus 356 ~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~-G~~~~l~---~ 431 (803)
+.|. .+++..+|+.||++|+||..||||++++|||+| |.|+|+|+.+ |..+.+. +
T Consensus 265 ~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-------------------G~PvI~~~~~~g~~~~v~~~~~ 323 (372)
T cd04949 265 LKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-------------------GLPVISYDVNYGPSEIIEDGEN 323 (372)
T ss_pred EcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhC-------------------CCCEEEecCCCCcHHHcccCCC
Confidence 6663 467999999999999999999999999999999 6789999987 7777772 4
Q ss_pred CceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHH
Q 003682 432 AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 479 (803)
Q Consensus 432 ~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 479 (803)
|++++|.|++++|++|..+++.+ +.+....+..++...++++..+++
T Consensus 324 G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 324 GYLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred ceEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 89999999999999999999865 444445555555566676666654
No 87
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.81 E-value=1.5e-18 Score=190.10 Aligned_cols=280 Identities=16% Similarity=0.172 Sum_probs=189.5
Q ss_pred hhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCC-cHHHHHHH-hcCCEEeccCHhhHHHHH
Q 003682 134 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPI-RDELLRAL-LNADLIGFHTFDYARHFL 211 (803)
Q Consensus 134 ~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~-~~~il~~l-l~~dligf~~~~~~~~Fl 211 (803)
+..+| |+|++|+++......+........++.+..|..++... ...+. ...+..-+ -.+|.+-..+......+.
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 152 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQ 152 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHH
Confidence 44566 99999999987777776665467889999997665432 00011 11111111 234565444443333222
Q ss_pred HHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCccccc
Q 003682 212 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFK 288 (803)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~K 288 (803)
. . +. ...++.++|+|+|...|..... .....++++ .++++|+++||+++.|
T Consensus 153 ~-~----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K 206 (365)
T cd03807 153 A-I----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQK 206 (365)
T ss_pred H-c----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhc
Confidence 2 0 11 1225667899999887753211 112233333 4678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 003682 289 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 368 (803)
Q Consensus 289 gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~al 368 (803)
|+..+++|+..+.+++|+++ |+++|.++ .....+.... .. .+..+.+.+.+. .+++..+
T Consensus 207 ~~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~-------~~~~~~v~~~g~--~~~~~~~ 265 (365)
T cd03807 207 DHATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE-------LGLEDKVILLGE--RSDVPAL 265 (365)
T ss_pred CHHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh-------cCCCceEEEccc--cccHHHH
Confidence 99999999999988877654 88887433 2222222211 01 122334455553 4689999
Q ss_pred HHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-CCceeCCCCHHHHHHHH
Q 003682 369 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 369 y~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~~~lvnP~d~~~~a~ai 447 (803)
|+.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~-------------------g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i 326 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMAC-------------------GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAI 326 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhc-------------------CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHH
Confidence 99999999999999999999999999 67899999999988885 59999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHhhcccc-cCCHHHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQD 484 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~ 484 (803)
.++++++ +++....+..++++. .+++...++++.+.
T Consensus 327 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 327 EALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999866 445555556666654 48888888877664
No 88
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.81 E-value=6.6e-19 Score=181.06 Aligned_cols=190 Identities=19% Similarity=0.153 Sum_probs=117.8
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCc----
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG---- 608 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~---- 608 (803)
+|++|+||||++ .+. ++++++++|++| ++.|+.++++|||+...+..++..+. ..+++++||+.|..+..
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999998 333 556799999998 88899999999999999999887763 34799999999988542
Q ss_pred -----------eeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEee---cc-c---eEEEe---e---ccCCCccchhh
Q 003682 609 -----------VDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET---KE-S---ALVWN---F---QYADPDFGSCQ 664 (803)
Q Consensus 609 -----------~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~---k~-~---~~~~~---~---~~~d~~~~~~~ 664 (803)
..+...++. +.++++++...+..+-.++.. .. . .+... . +.....+-..
T Consensus 76 ~~~~~~~~~~~~i~~~~l~~------~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~- 148 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKPV------AKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLW- 148 (225)
T ss_pred cccccccCCCeEEEEcCCCH------HHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCC-
Confidence 122222211 222333322222111111000 00 0 00000 0 0000000000
Q ss_pred HHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCC--CcccEEEEeCChhhHHHHHHcchh
Q 003682 665 AKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM--LPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 665 ~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi--~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
..+....+.+.+....+.+..+..++++ ++++|||.|++.+++.+ ++ +.+++++|||+.||++||+.+|.+
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~s~~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~~ 221 (225)
T TIGR02461 149 SREGWEAILVTARARGLKYTHGGRFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDLA 221 (225)
T ss_pred CHHHHHHHHHHHHHcCCcEEECCEEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCCc
Confidence 0111222222233344566667777776 55999999999999998 66 566899999999999999999974
No 89
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.81 E-value=3.2e-19 Score=199.19 Aligned_cols=267 Identities=12% Similarity=0.058 Sum_probs=168.9
Q ss_pred HhhcCCCCCeEEEeCccccch---HHHHHhhCCCCeEEEEEecCCCChhhhhcCC--CcHHHHHHHhcCCEEeccCHhhH
Q 003682 133 MEVISPDDDFVWVHDYHLMVL---PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP--IRDELLRALLNADLIGFHTFDYA 207 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~ll---p~~lr~~~~~~~i~~flH~pfP~~~~~~~lp--~~~~il~~ll~~dligf~~~~~~ 207 (803)
++..+| |+|++|+.-.+.. ...++++. .. +..++|+.|+.+ ++... .....+... ...++
T Consensus 112 l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~Y--~~~~~~g~~~~~l~~~---------~~~~~ 176 (462)
T PLN02846 112 IPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLEY--VKREKNGRVKAFLLKY---------INSWV 176 (462)
T ss_pred HHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHHH--HHHhccchHHHHHHHH---------HHHHH
Confidence 355677 9999999866665 34444444 34 777999988543 22111 001111111 11222
Q ss_pred HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-C-C--CEEEEeecC
Q 003682 208 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-K-G--QIVMLGVDD 283 (803)
Q Consensus 208 ~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~-~--~~iil~V~R 283 (803)
+.|. |+.++.++....+ +. . .+...+.|||++.|.+... . .++.+ + + .+++++|||
T Consensus 177 ~r~~--~d~vi~pS~~~~~----l~--~---~~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vGR 236 (462)
T PLN02846 177 VDIY--CHKVIRLSAATQD----YP--R---SIICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIGK 236 (462)
T ss_pred HHHh--cCEEEccCHHHHH----Hh--h---CEEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEec
Confidence 2221 4444443321111 00 0 1222357999998763211 1 11122 2 2 357999999
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHH
Q 003682 284 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 363 (803)
Q Consensus 284 ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~ 363 (803)
|.+.||+..+|+|++.+.++.|+++ |+++| +||+.+++++.+.+ + +.. +++|.|..+.+
T Consensus 237 L~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~~----l-------~l~-~~vf~G~~~~~ 295 (462)
T PLN02846 237 MVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAEK----L-------ELD-VRVYPGRDHAD 295 (462)
T ss_pred CcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHHh----c-------CCc-EEEECCCCCHH
Confidence 9999999999999999988888755 88777 56666666555443 2 222 44577755544
Q ss_pred HHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCH
Q 003682 364 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI 440 (803)
Q Consensus 364 ~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~ 440 (803)
.+|+.+||||+||.+||||+|++||||| |.|||+++..| .+.+. +|+++ .|.
T Consensus 296 ---~~~~~~DvFv~pS~~Et~g~v~lEAmA~-------------------G~PVVa~~~~~-~~~v~~~~ng~~~--~~~ 350 (462)
T PLN02846 296 ---PLFHDYKVFLNPSTTDVVCTTTAEALAM-------------------GKIVVCANHPS-NEFFKQFPNCRTY--DDG 350 (462)
T ss_pred ---HHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCcEEEecCCC-cceeecCCceEec--CCH
Confidence 6899999999999999999999999999 67799999887 46662 36666 489
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 441 DAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 441 ~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
++++++|.++|..+++++..+ .+ ..+++..-++++++.+.
T Consensus 351 ~~~a~ai~~~l~~~~~~~~~~---a~---~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 351 KGFVRATLKALAEEPAPLTDA---QR---HELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHHccCchhHHHH---HH---HhCCHHHHHHHHHHHhc
Confidence 999999999998654333211 11 36787877887777654
No 90
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.81 E-value=9.1e-19 Score=194.10 Aligned_cols=240 Identities=16% Similarity=0.141 Sum_probs=165.5
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhC-CCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRF-NRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 209 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~-~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~ 209 (803)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+....+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 999999987776666666542 23456666776554332211 11234678877766654444
Q ss_pred HHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcc--cc
Q 003682 210 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMD--IF 287 (803)
Q Consensus 210 Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld--~~ 287 (803)
+.. .++. ..++.++|+|||.+.+... .+ ...+++.|+++||+. +.
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 332 1211 1245678999997655311 00 013467899999996 46
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC--CHHHH
Q 003682 288 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL--QFYER 365 (803)
Q Consensus 288 Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~--~~~~l 365 (803)
||+..+++|+..+. + ++.|+++|. +++.++++ +++.+. +....+.|.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l~----~~~~~~-------~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKCK----AYSREL-------GIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHHH----HHHHHc-------CCCCeEEEecccCCcHHHH
Confidence 99999999998762 2 456888883 34434443 333332 233345666655 45899
Q ss_pred HHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecc-cccccccCC---CCceeCCCCHH
Q 003682 366 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE-FVGCSPSLS---GAIRVNPWNID 441 (803)
Q Consensus 366 ~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~-~~G~~~~l~---~~~lvnP~d~~ 441 (803)
..+|+.||++|+||..||||++++||||| |.|+|+|+ .+|..+.+. +|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~-------------------G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSY-------------------GIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHc-------------------CCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999999999999999999999999999 67899999 888888773 38999999999
Q ss_pred HHHHHHHHHhCCCH
Q 003682 442 AVAEAMDSALGVSD 455 (803)
Q Consensus 442 ~~a~ai~~aL~~~~ 455 (803)
++|++|.++++.+.
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999998764
No 91
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.81 E-value=1.8e-18 Score=189.61 Aligned_cols=283 Identities=20% Similarity=0.211 Sum_probs=196.4
Q ss_pred hcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHH
Q 003682 135 VISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCC 214 (803)
Q Consensus 135 ~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~ 214 (803)
..++ |+|++|......+......+..+.++.+..|.+++....... ..+......+-.+|.+-+.+....+.+....
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4555 899999555444444444444457899999977664322211 1222333445678999888876666555311
Q ss_pred HHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHH
Q 003682 215 SRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKL 294 (803)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l 294 (803)
....++.++|+|+|...+..... ...... ....+++.|+++||+.+.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 11235678899999887753211 111111 1124678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhccc
Q 003682 295 LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAEC 374 (803)
Q Consensus 295 ~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv 374 (803)
+|++.+.+++|+++ |+++|.+ +....+.+.++ . .+..+.+.+.|.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~~----l~i~g~~-----~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDVH----LVIVGDG-----PLREALEALAA----E-------LGLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCeE----EEEEcCC-----cchHHHHHHHH----h-------cCCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 99999988766544 7777732 23333333332 2 333456677889999999999999999
Q ss_pred ceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHh
Q 003682 375 CLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSAL 451 (803)
Q Consensus 375 ~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL 451 (803)
++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|.+++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~-------------------G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMAC-------------------GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred eecchhhccCChHHHHHHhc-------------------CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh
Confidence 99999999999999999999 67899999999888873 368999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHH
Q 003682 452 GVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 452 ~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 487 (803)
+++.. ....+........+++..+++++.+.+++
T Consensus 343 ~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 343 ADPWL--RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 87665 22223333445567888888888776543
No 92
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.80 E-value=3.7e-18 Score=188.65 Aligned_cols=278 Identities=17% Similarity=0.180 Sum_probs=192.7
Q ss_pred hcCCCCCeEEEeC-ccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcC-CC-------cHHHH-HHHhcCCEEeccCH
Q 003682 135 VISPDDDFVWVHD-YHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-PI-------RDELL-RALLNADLIGFHTF 204 (803)
Q Consensus 135 ~~~~~~d~iwihD-yhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~l-p~-------~~~il-~~ll~~dligf~~~ 204 (803)
..+| |+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+. ..+..+|.+-+.+.
T Consensus 97 ~~~~--D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 97 RRRP--DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred ccCC--CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 4455 9999998 445555666555556889999999988754322111 11 11111 23456788888888
Q ss_pred hhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCc
Q 003682 205 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDM 284 (803)
Q Consensus 205 ~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rl 284 (803)
...+.+.. .+ ....++.++|+|+|...+...... .. ........++.+|+++||+
T Consensus 175 ~~~~~~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 175 GMREYLVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ES-LRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hh-hhhccCCCCcEEEEEecCc
Confidence 77766551 01 112356789999998877532111 00 1111122567899999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHH
Q 003682 285 DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYE 364 (803)
Q Consensus 285 d~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~ 364 (803)
.+.||+..+++|+..+.+. |++ .|+++|. ++....+++.+. . .+...++++ +.++.++
T Consensus 230 ~~~k~~~~l~~~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~~~~~----~-------~~~~~v~~~-g~~~~~~ 287 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR-PDI----RFLIVGD-----GPEKEELKELAK----A-------LGLDNVTFL-GRVPKEE 287 (394)
T ss_pred ccccCHHHHHHHHHHHhhc-CCe----EEEEeCC-----cccHHHHHHHHH----H-------cCCCcEEEe-CCCChHH
Confidence 9999999999999998776 554 4777773 333333333221 1 122335444 5899999
Q ss_pred HHHHHHhcccceecccccCC-----CCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeC
Q 003682 365 RIAYYVIAECCLVTAVRDGM-----NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVN 436 (803)
Q Consensus 365 l~aly~~Adv~v~~S~~EG~-----~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvn 436 (803)
+..+|+.||++++||..|++ +++++|||+| |.|+|+|+.+|..+.+. .|++++
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~-------------------G~pvi~~~~~~~~~~~~~~~~g~~~~ 348 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAA-------------------GKPVLASVDGESAELVEEAGAGLVVP 348 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHC-------------------CCcEEEecCCCchhhhccCCcceEeC
Confidence 99999999999999999876 5557999999 67899999999998883 489999
Q ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccc-cCCHHHHHHHH
Q 003682 437 PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSF 481 (803)
Q Consensus 437 P~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 481 (803)
+.|+++++++|.+++. +++++....+..++++. .+++..+++++
T Consensus 349 ~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 349 PGDPEALAAAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred CCCHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 9999999999999995 45555566666666666 68888888765
No 93
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.80 E-value=1.1e-17 Score=187.30 Aligned_cols=316 Identities=14% Similarity=0.156 Sum_probs=184.7
Q ss_pred CCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc-HHHHHHHhcCCEEeccCH-------hhHHHHH
Q 003682 140 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-DELLRALLNADLIGFHTF-------DYARHFL 211 (803)
Q Consensus 140 ~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~-~~il~~ll~~dligf~~~-------~~~~~Fl 211 (803)
.|+++.||++.-....+||+..++++..|+.| ..+.=|.|-.. ..+- .++-.|.-. -+.++.+
T Consensus 149 ~dViH~HeWm~g~a~~~lK~~~~~VptVfTtH----AT~~GR~l~~g~~~~y-----~~l~~~~~d~eA~~~~I~~r~~i 219 (590)
T cd03793 149 AVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTH----ATLLGRYLCAGNVDFY-----NNLDYFDVDKEAGKRGIYHRYCI 219 (590)
T ss_pred CeEEEEcchhHhHHHHHHHHhCCCCCEEEEec----ccccccccccCCcccc-----hhhhhcchhhhhhcccchHHHHH
Confidence 49999999999999999998889999999999 33333321100 0000 000001000 0122222
Q ss_pred HHH-----HHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCC----chHHHHHHH-----HHHHh---CC
Q 003682 212 SCC-----SRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL----PETEAKVAE-----LQDQF---KG 274 (803)
Q Consensus 212 ~~~-----~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~----~~~~~~~~~-----l~~~~---~~ 274 (803)
+.. .+++.++...... .....++...+ |+|+|||++.|.+.... ...++++.+ ++.++ ++
T Consensus 220 E~~aa~~Ad~fttVS~it~~E--~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d 296 (590)
T cd03793 220 ERAAAHCAHVFTTVSEITAYE--AEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLD 296 (590)
T ss_pred HHHHHhhCCEEEECChHHHHH--HHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCC
Confidence 211 1111111111000 01112333223 89999999998643211 011122222 34544 36
Q ss_pred CEEEEe-ecCccc-ccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHh
Q 003682 275 QIVMLG-VDDMDI-FKGISLKLLAMEQLLSQNPSKR-GKIVLVQIANPARGRG---------RDVQEVQSETHATVRRIN 342 (803)
Q Consensus 275 ~~iil~-V~Rld~-~Kgi~~~l~A~~~ll~~~p~~~-~~v~lv~i~~~~~~~~---------~~~~~l~~~v~~lv~~in 342 (803)
++++++ +||+++ .||++.+|+|+.++-..-..-. +..|+..+..|..... +-..++++.+.++..+|.
T Consensus 297 ~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~ 376 (590)
T cd03793 297 KTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIG 376 (590)
T ss_pred CeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhh
Confidence 788888 799999 9999999999998755221111 2223333334443221 223456666666655555
Q ss_pred cc---------c-----------------------------------------------------CC-CCcccEEEecCC
Q 003682 343 KI---------F-----------------------------------------------------GR-PGYQPVVLIDTP 359 (803)
Q Consensus 343 ~~---------~-----------------------------------------------------~~-~~~~~v~~~~~~ 359 (803)
.+ . .. .+-..|+|....
T Consensus 377 ~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~ 456 (590)
T cd03793 377 KRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEF 456 (590)
T ss_pred hhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccc
Confidence 54 1 00 112234443333
Q ss_pred CC------HHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccc----ccC
Q 003682 360 LQ------FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS----PSL 429 (803)
Q Consensus 360 ~~------~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~----~~l 429 (803)
++ ..+...+|+.||+||+||.+||||++++||||| |.|+|+|..+|.. +.+
T Consensus 457 L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~-------------------G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 457 LSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVM-------------------GIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred cCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHc-------------------CCCEEEccCcchhhhhHHHh
Confidence 22 235778899999999999999999999999999 6789999999984 444
Q ss_pred C----CCceeC-------CCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 430 S----GAIRVN-------PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 430 ~----~~~lvn-------P~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
. .|+.|. +.++++++++|.+.+.++..++........+....+++.+-+..+++.-.
T Consensus 518 ~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 518 EDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred ccCCCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2 378887 45678999999999876654444333333345556777777776665543
No 94
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.79 E-value=2.7e-18 Score=186.62 Aligned_cols=264 Identities=13% Similarity=0.090 Sum_probs=179.7
Q ss_pred hhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHH
Q 003682 134 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 134 ~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
+..+| |+|++|+.+...+...+.... .++.+..|..++....... +.......+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 44566 999999888222222222211 4788888876654322110 000122334567887776665441110
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 293 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~ 293 (803)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 0112356778999998765421 12467889999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003682 294 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 373 (803)
Q Consensus 294 l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Ad 373 (803)
++|++.+.+.+|+++ |+++|.+ ++...+.+ ++.+ .+..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGDG-----PEREALEA----LIKE-------LGLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeCC-----CCHHHHHH----HHHH-------cCCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988777665 7777732 23333333 2333 233445666665 689999999999
Q ss_pred cceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-C---CCceeCCCCHHHHHHHHHH
Q 003682 374 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S---GAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 374 v~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~---~~~lvnP~d~~~~a~ai~~ 449 (803)
++++||..||||++++|||+| |.|+|+|+..|..+.+ . .|+++++.|+++++++|.+
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 315 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAF-------------------GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR 315 (348)
T ss_pred EEEeCccccccCHHHHHHHHc-------------------CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH
Confidence 999999999999999999999 6779999876655544 2 5899999999999999999
Q ss_pred HhCCCHHHHHHHHHHhhcccccCCHHHHHHHHH
Q 003682 450 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 482 (803)
Q Consensus 450 aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l 482 (803)
+++.+ +.+....+..++.++.+++..++++|.
T Consensus 316 ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 316 LMEDE-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHcCH-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 99844 444444555566778888888887764
No 95
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.79 E-value=4.8e-18 Score=175.12 Aligned_cols=189 Identities=14% Similarity=0.125 Sum_probs=127.3
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCcee
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD 610 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~~~ 610 (803)
+|+||+||||||++ .+..+++.++++|++| +++|+.|++||||+..++..+.+.+. ..++|++||+.|+.+..
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 48999999999999 6677889999999998 89999999999999999999988773 34799999999997743
Q ss_pred EEe-----------------ecCCCCccHHHHHHHHHHHHhhcCCC--------------ceE------eeccceEEEee
Q 003682 611 WET-----------------CVSVPDFSWKQIAEPVMKLYTETTDG--------------STI------ETKESALVWNF 653 (803)
Q Consensus 611 ~~~-----------------~~~~~~~~~~~~~~~i~~~y~~~~~g--------------~~i------e~k~~~~~~~~ 653 (803)
|.. .+...-..|+..+..+-..+.....| .-. ..++++-.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 220 00011112333333332222111110 000 00111111111
Q ss_pred ccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEe------------------C---CCCHHHHHHHHHHHhhh
Q 003682 654 QYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKP------------------Q---GVNKGLVAQHQLETMHQ 712 (803)
Q Consensus 654 ~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p------------------~---gv~Kg~al~~ll~~l~~ 712 (803)
... ...+ .+.+...++.+..|..++.++. . +++||.|+++|.+.+..
T Consensus 155 ~~~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGD--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCC--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 110 1111 4455666788888988988887 5 89999999999998833
Q ss_pred CCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 713 KGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 713 ~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.. ..=.++++|||.||++||+++...
T Consensus 223 ~~-~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 223 HL-GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred cc-CCceEEEecCChhhHHHHHhCCee
Confidence 22 233799999999999999999874
No 96
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.78 E-value=1e-17 Score=183.59 Aligned_cols=263 Identities=16% Similarity=0.168 Sum_probs=178.3
Q ss_pred HHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHH
Q 003682 130 DKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 209 (803)
Q Consensus 130 ~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~ 209 (803)
.++++..+| |+|++|.+..+.++.+...+..+.|+.+.+|-.++.......+ .. ..|.+-..+....+.
T Consensus 89 ~~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~~~~------~~---~~d~ii~~s~~~~~~ 157 (359)
T cd03823 89 ARLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQGLF------KK---GGDAVIAPSRFLLDR 157 (359)
T ss_pred HHHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchhhhh------cc---CCCEEEEeCHHHHHH
Confidence 344555677 8999998855544433333334689999999665432111111 11 127777766655554
Q ss_pred HHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccC
Q 003682 210 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKG 289 (803)
Q Consensus 210 Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kg 289 (803)
|.. .+ ....++.++|+|+|...+..... ....++.+|+++||+.+.||
T Consensus 158 ~~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~ 205 (359)
T cd03823 158 YVA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKG 205 (359)
T ss_pred HHH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccC
Confidence 442 01 00236788999999987652110 11246788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 003682 290 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 369 (803)
Q Consensus 290 i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly 369 (803)
+..+++|+..+.+ ++ +.|+++|... ......... +..+.+.+.|.++.+++..+|
T Consensus 206 ~~~li~~~~~l~~--~~----~~l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 206 VDLLLEAFKRLPR--GD----IELVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred HHHHHHHHHHHHh--cC----cEEEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHH
Confidence 9999999998866 44 4488887433 111111111 112356677889999999999
Q ss_pred Hhcccceeccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHH
Q 003682 370 VIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 445 (803)
Q Consensus 370 ~~Adv~v~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ 445 (803)
+.||++++||. .||+|++++|||+| |.|+|+|+.+|..+.+. .|++++|.|++++++
T Consensus 261 ~~ad~~i~ps~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~ 321 (359)
T cd03823 261 AEIDVLVVPSIWPENFPLVIREALAA-------------------GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAA 321 (359)
T ss_pred HhCCEEEEcCcccCCCChHHHHHHHC-------------------CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHH
Confidence 99999999997 79999999999999 67899999999888883 489999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHH
Q 003682 446 AMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 446 ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 483 (803)
+|.++++ +++.+....+..++.+.. ..+++++++
T Consensus 322 ~i~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 322 ALERLID-DPDLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 9999998 444444444555544432 445554443
No 97
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.78 E-value=1.4e-17 Score=188.15 Aligned_cols=161 Identities=7% Similarity=0.010 Sum_probs=122.9
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCC--CCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSK--RGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 351 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~--~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~ 351 (803)
+..+++++||+.+.||+..+++|++.+.+..++. ..++.|+++|. |+..+++++.++ + .+..
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~~~l~~~~~----~-------~~l~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLKEKYLERIK----E-------LKLK 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccHHHHHHHHH----H-------cCCC
Confidence 3568889999999999999999999987642111 11355888883 344444444443 3 3445
Q ss_pred cEEEecCCCCHHHHHHHHHhcccceecc---cccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccccc
Q 003682 352 PVVLIDTPLQFYERIAYYVIAECCLVTA---VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 428 (803)
Q Consensus 352 ~v~~~~~~~~~~~l~aly~~Adv~v~~S---~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~ 428 (803)
.++++.+.++.++++.+|++||++|+++ ..|||+++++||||| |.|+|+|+.+|..+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-------------------G~PVI~s~~~~~~ei 355 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCALDFKCIDEL 355 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-------------------CCCEEEeCCCCHHHH
Confidence 6888888899999999999999998642 358899999999999 678999999999988
Q ss_pred CC---CCceeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHHhhccccc
Q 003682 429 LS---GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHEKHYRYVST 471 (803)
Q Consensus 429 l~---~~~lvnP~d~~~~a~ai~~aL~~~--~~er~~r~~~~~~~v~~ 471 (803)
+. +|++|+ |++++|++|.++++++ ++++..+.+..+++.+.
T Consensus 356 v~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 356 VKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred hcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 83 488884 8999999999999972 66666666666665543
No 98
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.77 E-value=1.3e-17 Score=181.92 Aligned_cols=277 Identities=16% Similarity=0.134 Sum_probs=187.8
Q ss_pred HhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCC-cHHH-HHHHhcCCEEeccCHhhHHHH
Q 003682 133 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPI-RDEL-LRALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~-~~~i-l~~ll~~dligf~~~~~~~~F 210 (803)
++..+| |+|++|..+..++..++.+.....++.+.+|...+.......... ...+ ...+-.+|.+.+.+....+.+
T Consensus 76 ~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 153 (359)
T cd03808 76 LRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLA 153 (359)
T ss_pred HHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHH
Confidence 345567 899999888777777777655667788888764332111000000 0011 112335688888887776665
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCH
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi 290 (803)
.+. +.. .....+.+.|+|+|.+.+..... . ...++..|+++||+.+.||+
T Consensus 154 ~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~~ 203 (359)
T cd03808 154 LKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKGI 203 (359)
T ss_pred HHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccCH
Confidence 541 100 01234566799999887652211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|++.+.+++|+++ |+++|..... . ..... ++.. .+..+.+.+.|. .+++..+|+
T Consensus 204 ~~li~~~~~l~~~~~~~~----l~i~G~~~~~---~--~~~~~---~~~~-------~~~~~~v~~~g~--~~~~~~~~~ 262 (359)
T cd03808 204 DELLEAARILKAKGPNVR----LLLVGDGDEE---N--PAAIL---EIEK-------LGLEGRVEFLGF--RDDVPELLA 262 (359)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEcCCCcc---h--hhHHH---HHHh-------cCCcceEEEeec--cccHHHHHH
Confidence 999999999988777655 8888854311 1 11111 1111 112234445554 678999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai 447 (803)
.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~-------------------G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i 323 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAM-------------------GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAI 323 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHc-------------------CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHH
Confidence 999999999999999999999999 67899999999998883 38999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHhhcc-cccCCHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFL 482 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 482 (803)
.+++..+ +.+....+..+++ ...++...++++++
T Consensus 324 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 324 ERLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9988744 4444445555555 56688888887764
No 99
>PHA01630 putative group 1 glycosyl transferase
Probab=99.77 E-value=7.1e-18 Score=183.55 Aligned_cols=186 Identities=13% Similarity=0.078 Sum_probs=137.0
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 318 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~ 318 (803)
++.++|+|||++.|.+... ...++.++++++|+.+.||+..+|+|++.+.+++|+++ ++++|.
T Consensus 119 ~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~ 181 (331)
T PHA01630 119 PIYVIPHNLNPRMFEYKPK-------------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS 181 (331)
T ss_pred CEEEECCCCCHHHcCCCcc-------------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC
Confidence 5678899999988753210 01245567778899999999999999999988877654 887772
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCC
Q 003682 319 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 398 (803)
Q Consensus 319 ~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~ 398 (803)
. .. +. .+. ++. .+.+.++.+++..+|+.||+||+||..||||++++|||||
T Consensus 182 ~-----~~--~~--~l~-------------~~~---~~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~---- 232 (331)
T PHA01630 182 N-----ML--DP--RLF-------------GLN---GVKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL---- 232 (331)
T ss_pred c-----cc--ch--hhc-------------ccc---ceeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc----
Confidence 1 11 11 110 000 1234578999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCceEEecccccccccCCC-----------------------CceeCCCCHHHHHHHHHHHhCCC-
Q 003682 399 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG-----------------------AIRVNPWNIDAVAEAMDSALGVS- 454 (803)
Q Consensus 399 ~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~-----------------------~~lvnP~d~~~~a~ai~~aL~~~- 454 (803)
|.|+|+|+.+|..+.+.+ |++++| |.+++++++.++|..+
T Consensus 233 ---------------G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~ 296 (331)
T PHA01630 233 ---------------GLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWT 296 (331)
T ss_pred ---------------CCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCC
Confidence 678999999988887732 444555 7788999999998764
Q ss_pred -HHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 455 -DAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 455 -~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
++.+...........+++++...++++++.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 297 PEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 33333334444556778999999999988765
No 100
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.76 E-value=3.9e-18 Score=177.75 Aligned_cols=185 Identities=19% Similarity=0.306 Sum_probs=114.7
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC---CCcEEecCcEEEEeCCc
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVRPNYG 608 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~---~l~lia~nGa~i~~~~~ 608 (803)
.++|++|+||||++ .+..-.....+.++. ....++.++++|||+.+++++.+...+ ...+|+.+|+.|+...
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~~-~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLEQ-QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHHH-HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHHH-hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 58999999999993 122223444455552 258899999999999999999887641 2457899999888832
Q ss_pred eeEEeecCCCCccHHHHHH-----HHHHHHhhcCCCceE----eeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC
Q 003682 609 VDWETCVSVPDFSWKQIAE-----PVMKLYTETTDGSTI----ETKESALVWNFQYADPDFGSCQAKELLDHLESVLANE 679 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~-----~i~~~y~~~~~g~~i----e~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~ 679 (803)
.|.. +..|.+.+. +..+....+.++... ....+.+++.+...+ ....++.|.+.+...
T Consensus 77 -~~~~-----d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~-------~~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 77 -NWQP-----DEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDD-------SADILEEIRARLRQR 143 (247)
T ss_dssp -TTEE------HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTS-------HCHHHHHHHHHHHCC
T ss_pred -CCcC-----hHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEeccc-------chhHHHHHHHHHHHc
Confidence 2211 122332222 111122222333221 122233444433221 122345556555554
Q ss_pred Ce---EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcc
Q 003682 680 PV---SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 737 (803)
Q Consensus 680 ~~---~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag 737 (803)
+. .+.++...++|.|+++|||.|++++++++ ++++++++++|||.||++||....
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~ 201 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD 201 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC
Confidence 43 34567889999999999999999999999 999999999999999999995554
No 101
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.75 E-value=3.6e-17 Score=180.10 Aligned_cols=261 Identities=16% Similarity=0.154 Sum_probs=173.0
Q ss_pred hcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHH-HHHHhcCCEEeccCHhhHHHHHHH
Q 003682 135 VISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDEL-LRALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 135 ~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~i-l~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
..+| |+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..+|.+-..+..+.+.+..
T Consensus 81 ~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~- 154 (357)
T cd03795 81 AKKA--DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV- 154 (357)
T ss_pred CCCC--CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-
Confidence 4455 89999976544332222222 46778888995432211110 111111 22445678877766655544332
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 293 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~ 293 (803)
+ + ....++.++|+|+|.+.+..... .. ........++++|+++||+.+.||+..+
T Consensus 155 ---~-~---------------~~~~~~~~i~~gi~~~~~~~~~~---~~---~~~~~~~~~~~~i~~~G~~~~~K~~~~l 209 (357)
T cd03795 155 ---L-R---------------RFRDKVRVIPLGLDPARYPRPDA---LE---EAIWRRAAGRPFFLFVGRLVYYKGLDVL 209 (357)
T ss_pred ---h-c---------------CCccceEEecCCCChhhcCCcch---hh---hHhhcCCCCCcEEEEecccccccCHHHH
Confidence 0 0 01135678899999887753211 10 0111112467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003682 294 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 373 (803)
Q Consensus 294 l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Ad 373 (803)
++|++++. ++.|+++|.+ +....+++ ++.+ .+..+-+.+.|.++.+++..+|+.||
T Consensus 210 i~a~~~l~--------~~~l~i~G~g-----~~~~~~~~----~~~~-------~~~~~~V~~~g~v~~~~~~~~~~~ad 265 (357)
T cd03795 210 LEAAAALP--------DAPLVIVGEG-----PLEAELEA----LAAA-------LGLLDRVRFLGRLDDEEKAALLAACD 265 (357)
T ss_pred HHHHHhcc--------CcEEEEEeCC-----hhHHHHHH----HHHh-------cCCcceEEEcCCCCHHHHHHHHHhCC
Confidence 99998763 4558888732 33333333 3322 23334567788999999999999999
Q ss_pred cceeccc--ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC----CCceeCCCCHHHHHHHH
Q 003682 374 CCLVTAV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS----GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 374 v~v~~S~--~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~----~~~lvnP~d~~~~a~ai 447 (803)
++++||. .||||++++|||+| |.|+|+|+.+|..+.+. .|++++|.|+++++++|
T Consensus 266 ~~i~ps~~~~e~~g~~~~Ea~~~-------------------g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i 326 (357)
T cd03795 266 VFVFPSVERSEAFGIVLLEAMAF-------------------GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAI 326 (357)
T ss_pred EEEeCCcccccccchHHHHHHHc-------------------CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHH
Confidence 9999996 59999999999999 67799999999888762 38899999999999999
Q ss_pred HHHhCCCHHHHHHHHHHhhcccc
Q 003682 448 DSALGVSDAEKQMRHEKHYRYVS 470 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v~ 470 (803)
.++++.+ +++....+..++++.
T Consensus 327 ~~l~~~~-~~~~~~~~~~~~~~~ 348 (357)
T cd03795 327 RRLLEDP-ELRERLGEAARERAE 348 (357)
T ss_pred HHHHHCH-HHHHHHHHHHHHHHH
Confidence 9999844 445555555555543
No 102
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.74 E-value=2.6e-16 Score=176.98 Aligned_cols=190 Identities=15% Similarity=0.124 Sum_probs=136.3
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHH----HHHHHHHHhCCCCCCcEEEE
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKL----LAMEQLLSQNPSKRGKIVLV 314 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l----~A~~~ll~~~p~~~~~v~lv 314 (803)
++.++|+|||.+.|.+..... . ....++++|+++||+++.||+..++ +++..+.+++|+++ |+
T Consensus 197 ~v~vipngvd~~~f~~~~~~~------~---~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ 263 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP------N---PYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FY 263 (397)
T ss_pred CeEEeecccchhhcCCCcccc------C---CCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EE
Confidence 567889999999885321100 0 0013567899999999999999887 56667777888766 88
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceeccc-ccCCCCCceeeee
Q 003682 315 QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYII 393 (803)
Q Consensus 315 ~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~-~EG~~lv~~Ea~a 393 (803)
++|.+ +. . +++++.. .+-+.+.|.++ ++..+|+.||++|+||. .||++++++||||
T Consensus 264 ivG~g-----~~-~----~~~~l~~-----------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma 320 (397)
T TIGR03087 264 IVGAK-----PS-P----AVRALAA-----------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMA 320 (397)
T ss_pred EECCC-----Ch-H----HHHHhcc-----------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHH
Confidence 88843 22 1 2222211 12245667776 68999999999999996 5999999999999
Q ss_pred eecCCcccccccCCCCCCCCCceEEecccccccccC--CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-c
Q 003682 394 CRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-S 470 (803)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l--~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~ 470 (803)
| |.|+|+|..++..... +.|+++. .|++++|++|.++++. ++.+....++.++++ .
T Consensus 321 ~-------------------G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~ 379 (397)
T TIGR03087 321 M-------------------AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQ 379 (397)
T ss_pred c-------------------CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHH
Confidence 9 6679999864322111 3478885 8999999999999974 455566667777776 4
Q ss_pred cCCHHHHHHHHHHHH
Q 003682 471 THDVAYWARSFLQDL 485 (803)
Q Consensus 471 ~~~~~~W~~~~l~~l 485 (803)
.+++...++++.+-+
T Consensus 380 ~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 380 HYHWPRNLARLDALL 394 (397)
T ss_pred hCCHHHHHHHHHHHh
Confidence 689998888876654
No 103
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.74 E-value=9e-17 Score=175.55 Aligned_cols=247 Identities=16% Similarity=0.083 Sum_probs=164.9
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHH
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFL 211 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl 211 (803)
+++..++ |+|++|+....++ + .+..+.|+.+.+|..++.... .........+.+-.-+....+.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 3445566 9999999887776 2 234567899999977653221 122233334433332222221110
Q ss_pred HHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHH
Q 003682 212 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGIS 291 (803)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~ 291 (803)
. . .++.++|+|+|++.|... ..++.+|+++||+.+.||+.
T Consensus 148 --------------------~---~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 --------------------P---L-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred --------------------c---c-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHH
Confidence 0 0 356789999999887520 13466899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003682 292 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 371 (803)
Q Consensus 292 ~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~ 371 (803)
.+++|+++ ++ +.|+++|... ....+...+.+... ..+.+.+.|.++.+++..+|+.
T Consensus 188 ~li~~~~~-----~~----~~l~i~G~~~-----~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AG----IPLKLAGPVS-----DPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cC----CeEEEEeCCC-----CHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99999754 23 3488888432 11122222222100 1134567789999999999999
Q ss_pred cccceeccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHH
Q 003682 372 AECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 372 Adv~v~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai 447 (803)
||++++||. .||||++++||||| |.|+|+|+.+|..+.+. +|+++++ +++++++|
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~-------------------G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l 302 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMAC-------------------GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAV 302 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhc-------------------CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHH
Confidence 999999997 59999999999999 67899999999998883 4789987 99999999
Q ss_pred HHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 483 (803)
.+++..+.+..+ .....++++..-++++++
T Consensus 303 ~~l~~~~~~~~~------~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 303 ARADRLDRAACR------RRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHHhccHHHHHH------HHHHHhCCHHHHHHHHHH
Confidence 998765432111 111255777777766655
No 104
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.74 E-value=4.8e-17 Score=176.88 Aligned_cols=247 Identities=18% Similarity=0.159 Sum_probs=165.8
Q ss_pred hhcCCCCCeEEEeCc-cccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHH
Q 003682 134 EVISPDDDFVWVHDY-HLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 212 (803)
Q Consensus 134 ~~~~~~~d~iwihDy-hl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~ 212 (803)
+..+| |+|++|++ ...++..+ ..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+..
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~~~-~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLALL-AARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHHHH-Hhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 34466 99999988 44444443 3333 7899999998776432211 111112233455678887777665555443
Q ss_pred HHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHH
Q 003682 213 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISL 292 (803)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~ 292 (803)
.. + ....++.++|+|+|.+.+..... ... ......++.+|+++||+.+.||+..
T Consensus 153 ~~----~---------------~~~~~~~vi~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----G---------------IPPDKIEVIYNPIDIEEIRALAE-----EPL--ELGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----c---------------CCccccEEecCCcChhhcCcccc-----hhh--hcCCCCCceEEEEEecchhhcChHH
Confidence 11 1 01236678899999887753211 000 0011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003682 293 KLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA 372 (803)
Q Consensus 293 ~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~A 372 (803)
+++|++.+.+++|+++ |+++|.+ +...++++ ++.+. +..+.+.+.+.. +++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~~----~~~~~-------~~~~~v~~~g~~--~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGDG-----PLREELEA----LAKEL-------GLADRVHFLGFQ--SNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcCC-----ccHHHHHH----HHHhc-------CCCccEEEeccc--CCHHHHHHhC
Confidence 9999999988766655 8877732 23333333 33332 223345556554 4788999999
Q ss_pred ccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHH
Q 003682 373 ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 373 dv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~ 449 (803)
|+++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|.+++++.+..
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~ 325 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMAL-------------------GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALA 325 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHh-------------------CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHH
Confidence 9999999999999999999999 67899999999998883 4899999999999544444
Q ss_pred HhC
Q 003682 450 ALG 452 (803)
Q Consensus 450 aL~ 452 (803)
+..
T Consensus 326 i~~ 328 (353)
T cd03811 326 LLD 328 (353)
T ss_pred HHh
Confidence 433
No 105
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.72 E-value=2.1e-16 Score=174.65 Aligned_cols=191 Identities=13% Similarity=0.035 Sum_probs=139.7
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 318 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~ 318 (803)
.++|+|+|...+.. ....++.+ .+++.++++||+.+.||+..+++|+.++.. ++.|+++|.
T Consensus 167 ~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~l~ivG~ 229 (363)
T cd04955 167 TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDLIEAFSKSNS-------GKKLVIVGN 229 (363)
T ss_pred eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHHHHHHHhhcc-------CceEEEEcC
Confidence 57899999876542 01112222 345678899999999999999999987632 355888885
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccc-cCCCCCceeeeeeecC
Q 003682 319 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVR-DGMNLIPYEYIICRQG 397 (803)
Q Consensus 319 ~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~-EG~~lv~~Ea~a~~~~ 397 (803)
++ ...++.+.+.+ + .+..+.+.+.|.++.+++..+|+.||++++||.. ||||++++|||+|
T Consensus 230 ~~-----~~~~~~~~~~~---~-------~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~--- 291 (363)
T cd04955 230 AD-----HNTPYGKLLKE---K-------AAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAY--- 291 (363)
T ss_pred CC-----CcchHHHHHHH---H-------hCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHc---
Confidence 43 11223333332 1 1112345677899999999999999999999999 9999999999999
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccc-cCCHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVA 475 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~-~~~~~ 475 (803)
|.|+|+|+.+|..+.+ .+|.+++|.|. ++++|.+++..++. +....+..++.+. .+++.
T Consensus 292 ----------------G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~~~-~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 292 ----------------GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADPEE-VSAMAKAARERIREKYTWE 352 (363)
T ss_pred ----------------CCCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCHHH-HHHHHHHHHHHHHHhCCHH
Confidence 6789999999988888 45888888776 99999999986643 4444455555554 48888
Q ss_pred HHHHHHHHHH
Q 003682 476 YWARSFLQDL 485 (803)
Q Consensus 476 ~W~~~~l~~l 485 (803)
.-++++++.+
T Consensus 353 ~~~~~~~~~y 362 (363)
T cd04955 353 KIADQYEELY 362 (363)
T ss_pred HHHHHHHHHh
Confidence 8888877643
No 106
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.72 E-value=9.6e-17 Score=177.20 Aligned_cols=170 Identities=16% Similarity=0.210 Sum_probs=127.1
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA 320 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~ 320 (803)
.++|+|+|.+.|.... ..+++++++||+.+.||+..+++|++++ | ++ |+++|.
T Consensus 177 ~vi~~~~d~~~~~~~~----------------~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-- 229 (351)
T cd03804 177 TVIYPPVDTDRFTPAE----------------EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-- 229 (351)
T ss_pred EEECCCCCHhhcCcCC----------------CCCCEEEEEEcCccccChHHHHHHHHHC----C-Cc----EEEEEC--
Confidence 4678999988775211 2345799999999999999999999865 3 33 777773
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcc
Q 003682 321 RGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 400 (803)
Q Consensus 321 ~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~ 400 (803)
+++.+++++ . ..+.+.+.|.++.+++.++|+.||++++||. ||||++++|||||
T Consensus 230 ---g~~~~~l~~-------~---------~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~------ 283 (351)
T cd03804 230 ---GPELDRLRA-------K---------AGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMAS------ 283 (351)
T ss_pred ---ChhHHHHHh-------h---------cCCCEEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc------
Confidence 333333332 1 0123566779999999999999999999999 9999999999999
Q ss_pred cccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHH
Q 003682 401 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYW 477 (803)
Q Consensus 401 ~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 477 (803)
|.|+|+|..+|..+.+. .|++++|.|++++|++|.++++.+...+. .+++....++..+.
T Consensus 284 -------------G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~~~~~----~~~~~~~~~~~~~~ 346 (351)
T cd03804 284 -------------GTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNEDFDPQ----AIRAHAERFSESRF 346 (351)
T ss_pred -------------CCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcccCHH----HHHHHHHhcCHHHH
Confidence 67899999999888873 48999999999999999999987642222 22333334555555
Q ss_pred HHH
Q 003682 478 ARS 480 (803)
Q Consensus 478 ~~~ 480 (803)
.++
T Consensus 347 ~~~ 349 (351)
T cd03804 347 REK 349 (351)
T ss_pred HHH
Confidence 443
No 107
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.72 E-value=1.1e-16 Score=176.88 Aligned_cols=194 Identities=16% Similarity=0.180 Sum_probs=142.3
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCccc--ccCHHHHHHHHHHHHHh-CCCCCCcE
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDI--FKGISLKLLAMEQLLSQ-NPSKRGKI 311 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~--~Kgi~~~l~A~~~ll~~-~p~~~~~v 311 (803)
.++.++|+|+|.+.|.+.. . ...++.+ .++.+++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 3677899999998774211 1 1223333 35567777767654 89999999999988665 34 45
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCC-HHHHHHHHHhcccceecccccCCCCCcee
Q 003682 312 VLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ-FYERIAYYVIAECCLVTAVRDGMNLIPYE 390 (803)
Q Consensus 312 ~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~-~~~l~aly~~Adv~v~~S~~EG~~lv~~E 390 (803)
.++++|... .... . +....+.+.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~----------------~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P----------------DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c----------------cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 588777432 1000 0 0112345667777 88999999999999999999999999999
Q ss_pred eeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhc
Q 003682 391 YIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYR 467 (803)
Q Consensus 391 a~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~ 467 (803)
||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|.+++..+ +++....+..++
T Consensus 284 am~~-------------------g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 343 (365)
T cd03825 284 ALAC-------------------GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARE 343 (365)
T ss_pred HHhc-------------------CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 9999 67899999999888883 489999999999999999999744 444455555566
Q ss_pred cc-ccCCHHHHHHHHHHHHH
Q 003682 468 YV-STHDVAYWARSFLQDLE 486 (803)
Q Consensus 468 ~v-~~~~~~~W~~~~l~~l~ 486 (803)
++ ..+++...++++++.++
T Consensus 344 ~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 344 LAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 55 45888888888877654
No 108
>PLN02275 transferase, transferring glycosyl groups
Probab=99.71 E-value=2.9e-16 Score=174.70 Aligned_cols=240 Identities=10% Similarity=-0.002 Sum_probs=155.6
Q ss_pred hcCCCCCeEEEeCccccc--hHHHHHhhCCCCeEEEEEecCCCChhhhhc-C---CC----cHHHHHH-HhcCCEEeccC
Q 003682 135 VISPDDDFVWVHDYHLMV--LPTFLRKRFNRVKLGFFLHSPFPSSEIYRT-L---PI----RDELLRA-LLNADLIGFHT 203 (803)
Q Consensus 135 ~~~~~~d~iwihDyhl~l--lp~~lr~~~~~~~i~~flH~pfP~~~~~~~-l---p~----~~~il~~-ll~~dligf~~ 203 (803)
..+| |+|++|..+.+. +++.+..+..+.|+.+.+|..+.. .+.. . +. ...+-+. .-.+|.|-..+
T Consensus 98 ~~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S 173 (371)
T PLN02275 98 IPRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVT 173 (371)
T ss_pred CCCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECC
Confidence 3466 999999877533 344443444467898899965311 1100 0 00 0111111 12356666666
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecC
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDD 283 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~R 283 (803)
....+...+ . .|.. +.++|+| +.+.|.+... . ..++ .+...+++++||
T Consensus 174 ~~~~~~l~~----~----------------~g~~--i~vi~n~-~~~~f~~~~~---~----~~~~--~~~~~~i~~~gr 221 (371)
T PLN02275 174 KAMQHELDQ----N----------------WGIR--ATVLYDQ-PPEFFRPASL---E----IRLR--PNRPALVVSSTS 221 (371)
T ss_pred HHHHHHHHH----h----------------cCCC--eEEECCC-CHHHcCcCCc---h----hccc--CCCcEEEEEeCc
Confidence 544443321 0 0111 5677888 4566643211 0 0111 134567889999
Q ss_pred cccccCHHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 003682 284 MDIFKGISLKLLAMEQLLS-----------------QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFG 346 (803)
Q Consensus 284 ld~~Kgi~~~l~A~~~ll~-----------------~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~ 346 (803)
+.+.||+..+++|+..+.. ++|+ +.|+++| +|++.+++++.+++
T Consensus 222 l~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~---------- 282 (371)
T PLN02275 222 WTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISR---------- 282 (371)
T ss_pred eeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHH----------
Confidence 9999999999999988753 2444 5588888 44554555554443
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcccceecc---cccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccc
Q 003682 347 RPGYQPVVLIDTPLQFYERIAYYVIAECCLVTA---VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV 423 (803)
Q Consensus 347 ~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S---~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~ 423 (803)
.+...++++.+.++.++++.+|+.||+||+|+ ..||||++++||||| |.|+|+|..+
T Consensus 283 -~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~-------------------G~PVVa~~~g 342 (371)
T PLN02275 283 -LNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCAVSYS 342 (371)
T ss_pred -cCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC-------------------CCCEEEecCC
Confidence 33445777777889999999999999999753 248999999999999 6789999999
Q ss_pred cccccCC---CCceeCCCCHHHHHHHHHHHh
Q 003682 424 GCSPSLS---GAIRVNPWNIDAVAEAMDSAL 451 (803)
Q Consensus 424 G~~~~l~---~~~lvnP~d~~~~a~ai~~aL 451 (803)
|..+.+. +|++|+ |++++|++|.++|
T Consensus 343 g~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 343 CIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred ChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9888883 488996 6999999998875
No 109
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.69 E-value=1.1e-15 Score=170.87 Aligned_cols=316 Identities=19% Similarity=0.172 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHHHHhh---cCCCCCeEEEeCccccchHHHHHhh---CCCCeEEEEEecC-----CC-ChhhhhcCCC
Q 003682 118 WQAYVSVNKIFADKVMEV---ISPDDDFVWVHDYHLMVLPTFLRKR---FNRVKLGFFLHSP-----FP-SSEIYRTLPI 185 (803)
Q Consensus 118 w~~Y~~vN~~fa~~i~~~---~~~~~d~iwihDyhl~llp~~lr~~---~~~~~i~~flH~p-----fP-~~~~~~~lp~ 185 (803)
+.-+....++-++-+-.. ..| |+|++||||.-|+|.++++. ...++..|+.|-= |+ ...-...||.
T Consensus 108 ~~Rf~~F~~a~~~~~~~~~~~~~p--DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~ 185 (487)
T COG0297 108 AERFAFFSLAAAELAPLGLISWLP--DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF 185 (487)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCC--CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH
Confidence 444554444444433111 245 99999999999999999996 6789999999932 23 1112223441
Q ss_pred ------------c-HHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHH
Q 003682 186 ------------R-DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQL 252 (803)
Q Consensus 186 ------------~-~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f 252 (803)
. .-+-.|+..+|.|.--++.|++.-... ..|.. -.|. +.+ +..++.-+=+|||.+.+
T Consensus 186 ~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~---~~g~g---l~g~--l~~--~~~~l~GI~NgiD~~~w 255 (487)
T COG0297 186 EAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTP---EYGEG---LEGL--LSW--RSGKLSGILNGIDYDLW 255 (487)
T ss_pred HHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhccc---ccccc---chhh--hhh--ccccEEEEEeeEEeccc
Confidence 1 222335677787777777777654410 00000 0010 111 11355556677777766
Q ss_pred HHHhCC-------ch----HHHHHHHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003682 253 QSVLNL-------PE----TEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 316 (803)
Q Consensus 253 ~~~~~~-------~~----~~~~~~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i 316 (803)
.+.... .+ ..+....+++.+ .+.+++..|+|++..||++.+++|+..++++. ++ +|++
T Consensus 256 np~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vil 329 (487)
T COG0297 256 NPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLL 329 (487)
T ss_pred CcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEE
Confidence 432211 01 112223445555 25699999999999999999999999999987 44 7777
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 317 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 317 ~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
|.+ ...++..+..++.++.++ +.+.-..+..-...+|..||++++||..|++||+-++||.-
T Consensus 330 G~g-------d~~le~~~~~la~~~~~~---------~~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-- 391 (487)
T COG0297 330 GTG-------DPELEEALRALASRHPGR---------VLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-- 391 (487)
T ss_pred ecC-------cHHHHHHHHHHHHhcCce---------EEEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc--
Confidence 743 135777777777776543 22333455666679999999999999999999999999997
Q ss_pred CCcccccccCCCCCCCCCceEEecccccccccCC-----------CCceeCCCCHHHHHHHHHHHhCC---CHH-HHHHH
Q 003682 397 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-----------GAIRVNPWNIDAVAEAMDSALGV---SDA-EKQMR 461 (803)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-----------~~~lvnP~d~~~~a~ai~~aL~~---~~~-er~~r 461 (803)
|+++|+.+.+|.++.+. .|+++.|.+.++++.+|.+|+.. ++. .|..+
T Consensus 392 -----------------GtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~ 454 (487)
T COG0297 392 -----------------GTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQ 454 (487)
T ss_pred -----------------CCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 78999999999999883 27888888999999999999965 333 23333
Q ss_pred HHHhhcccccCCHHHHHHHHHHHHHHHH
Q 003682 462 HEKHYRYVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 462 ~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
..++. ..++++.=++++.+-.+...
T Consensus 455 ~~~m~---~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 455 PNAMG---ADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred Hhhcc---cccCchhHHHHHHHHHHHHh
Confidence 33333 45666777777766655543
No 110
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.67 E-value=4e-15 Score=168.83 Aligned_cols=287 Identities=18% Similarity=0.186 Sum_probs=175.8
Q ss_pred HHHHHHhhcCCCCCeEEEeCccccchHHHHHh-hCCCCeEEEEEecCCCC-hhhhhcCCCcHHHHHHHh-cCCEEeccCH
Q 003682 128 FADKVMEVISPDDDFVWVHDYHLMVLPTFLRK-RFNRVKLGFFLHSPFPS-SEIYRTLPIRDELLRALL-NADLIGFHTF 204 (803)
Q Consensus 128 fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~-~~~~~~i~~flH~pfP~-~~~~~~lp~~~~il~~ll-~~dligf~~~ 204 (803)
...++++..+| |+|++|.+.++ |.++.. +..++|+.+..|.-.+. ...|+.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 44445677888 89999988765 555543 33457777766543322 2222212 22333332 4799988888
Q ss_pred hhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-CCCEEEEeecC
Q 003682 205 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDD 283 (803)
Q Consensus 205 ~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~~~~iil~V~R 283 (803)
...+.+.. +|+. .. +.++|++ +.+.+.. +........+++.+ +++++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~~----~~~~~~~~~~r~~~~~~~~vil~~~~ 241 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEVP----PELAARAATLRRQLAPNRPVWIAAST 241 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccc-cccCCCC----hhhHHHHHHHHHHhcCCCcEEEEeCC
Confidence 88877664 2321 11 2344542 2221110 11112234456666 67788999987
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhH-HHHHHHHHHHHHHHhcc---cCCC---CcccEEEe
Q 003682 284 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDV-QEVQSETHATVRRINKI---FGRP---GYQPVVLI 356 (803)
Q Consensus 284 ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~-~~l~~~v~~lv~~in~~---~~~~---~~~~v~~~ 356 (803)
. .|+...+++||+++.+++|+++ |+++| ++++. +++++.+ .+.+-. +... .-...+++
T Consensus 242 ~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~~~~----~~~gl~~~~~~~~~~~~~~~~v~l 306 (425)
T PRK05749 242 H--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVEELL----KKAGLSYVRRSQGEPPSADTDVLL 306 (425)
T ss_pred C--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHHHHH----HhCCCcEEEccCCCCCCCCCcEEE
Confidence 5 6889999999999998888765 77776 34443 3444443 332211 1000 00012344
Q ss_pred cCCCCHHHHHHHHHhccccee-cccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccc----ccccC-C
Q 003682 357 DTPLQFYERIAYYVIAECCLV-TAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPSL-S 430 (803)
Q Consensus 357 ~~~~~~~~l~aly~~Adv~v~-~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G----~~~~l-~ 430 (803)
.+ +..++..+|+.||++++ +|+.||+|++++||||| |.|+|++...| ..+.+ .
T Consensus 307 ~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~-------------------G~PVI~g~~~~~~~e~~~~~~~ 365 (425)
T PRK05749 307 GD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF-------------------GVPVISGPHTFNFKEIFERLLQ 365 (425)
T ss_pred Ee--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh-------------------CCCEEECCCccCHHHHHHHHHH
Confidence 33 36799999999999655 78889999999999999 66788876543 23333 4
Q ss_pred CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 431 GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 431 ~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
+|.++.|.|++++|++|.++++ +++.+....++.++++.++. .-.+++++.+.
T Consensus 366 ~g~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 366 AGAAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred CCCeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 6888889999999999999997 45556666677777776552 33344444444
No 111
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.65 E-value=4.2e-16 Score=153.65 Aligned_cols=143 Identities=19% Similarity=0.320 Sum_probs=112.2
Q ss_pred CCCEEEEeecCcccccCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQ-NPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 351 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~-~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~ 351 (803)
.++++|+++||+++.||+..+++|+..+.++ .|++ .|+++|. ++....+... +... +..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~-----~~~~~~~~~~----~~~~-------~~~ 72 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVGD-----GEYKKELKNL----IEKL-------NLK 72 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEESH-----CCHHHHHHHH----HHHT-------TCG
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEcc-----cccccccccc----cccc-------ccc
Confidence 5789999999999999999999999999875 6654 4887772 2222333333 3332 222
Q ss_pred cEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-
Q 003682 352 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS- 430 (803)
Q Consensus 352 ~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~- 430 (803)
..+.+.+.++.+++.++|+.||++|.||..||+|++++|||+| |.|+|+|+.+|..+.+.
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-------------------GCPVIASDIGGNNEIIND 133 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-------------------T-EEEEESSTHHHHHSGT
T ss_pred ccccccccccccccccccccceecccccccccccccccccccc-------------------ccceeeccccCCceeecc
Confidence 2334455677899999999999999999999999999999999 77899999999888883
Q ss_pred --CCceeCCCCHHHHHHHHHHHhCCC
Q 003682 431 --GAIRVNPWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 431 --~~~lvnP~d~~~~a~ai~~aL~~~ 454 (803)
.|++++|.|+++++++|.+++.++
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 368999999999999999999866
No 112
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.59 E-value=2.2e-15 Score=155.56 Aligned_cols=190 Identities=16% Similarity=0.169 Sum_probs=146.6
Q ss_pred HHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-CCCEEEEeecCcccccCH
Q 003682 212 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~~~~iil~V~Rld~~Kgi 290 (803)
....|++.+++.++.+.+ +.-.-...++.++|+-++++.|.+.... +. .+...|+.++||-+.||+
T Consensus 144 ~~id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGi 210 (426)
T KOG1111|consen 144 ANIDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGI 210 (426)
T ss_pred cCCCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccch
Confidence 334555667776665432 3333344588999999999999853321 22 345889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
+.++.+..++.+++|+.+ ++++| +||....+++.+++. ..+..+.+.|.++++++...|.
T Consensus 211 Dll~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~-----------~l~~rV~~lG~v~h~~Vr~vl~ 270 (426)
T KOG1111|consen 211 DLLLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL-----------FLQDRVVMLGTVPHDRVRDVLV 270 (426)
T ss_pred HHHHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh-----------hccCceEEecccchHHHHHHHh
Confidence 999999999999999987 88777 566555566555552 2233456777999999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCCC-ceeCCCCHHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGA-IRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~-~lvnP~d~~~~a~ai~~ 449 (803)
..|||+.||+.|.|+++++||+.| |-++|.+..+|..+.|... +..-+-+++++++++.+
T Consensus 271 ~G~IFlntSlTEafc~~ivEAaSc-------------------GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ 331 (426)
T KOG1111|consen 271 RGDIFLNTSLTEAFCMVIVEAASC-------------------GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEK 331 (426)
T ss_pred cCcEEeccHHHHHHHHHHHHHHhC-------------------CCEEEEeecCCccccCCccceeccCCChHHHHHHHHH
Confidence 999999999999999999999999 5568999999999999554 43455578889998888
Q ss_pred HhCC
Q 003682 450 ALGV 453 (803)
Q Consensus 450 aL~~ 453 (803)
+++.
T Consensus 332 ai~~ 335 (426)
T KOG1111|consen 332 AITK 335 (426)
T ss_pred HHHH
Confidence 8863
No 113
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.56 E-value=3.5e-14 Score=136.94 Aligned_cols=198 Identities=21% Similarity=0.226 Sum_probs=123.4
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC--CCCcEEecCcEEEEeCC
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EGLGIAAEHGYFVRPNY 607 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l--~~l~lia~nGa~i~~~~ 607 (803)
.++++||+|+||||++++ -+.. .....|.+| ++.|..|++||..+..++..+-..+ +.+++++|||+.|+.+.
T Consensus 5 ~~~~lIFtDlD~TLl~~~-ye~~---pA~pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS-YEWQ---PAAPVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccceEEEEcccCcccCCC-CCCC---ccchHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 367999999999999932 2233 344556666 7779999999999999998887765 56889999999998764
Q ss_pred ceeEEeecC--------------CCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCcc-------------
Q 003682 608 GVDWETCVS--------------VPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF------------- 660 (803)
Q Consensus 608 ~~~~~~~~~--------------~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~------------- 660 (803)
+ |...-. ..-..+++...++-+.|- -.++...+....-.+....++.
T Consensus 80 ~--~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g----~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti 153 (274)
T COG3769 80 G--WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFG----FTTFDDVDDEEIAEWTGLPREQAALAMLREYSETI 153 (274)
T ss_pred c--ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhC----eeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhhe
Confidence 3 222100 000112222222222221 1111110000000000000000
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 661 ~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
-.+..++...++...+...++.++.|..+..+......||.|+.++++.+...+. ..-+++.|||.||.+||+.+...
T Consensus 154 ~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~A 231 (274)
T COG3769 154 IWRSSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDYA 231 (274)
T ss_pred eecccchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhhh
Confidence 0011123345566777777899999999999999999999999999997633232 22599999999999999999763
No 114
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.55 E-value=2.2e-13 Score=151.85 Aligned_cols=266 Identities=15% Similarity=0.121 Sum_probs=166.1
Q ss_pred CCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc-HHHHHHHhcCCEEeccCHhhHHHHHHHHH
Q 003682 137 SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-DELLRALLNADLIGFHTFDYARHFLSCCS 215 (803)
Q Consensus 137 ~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~-~~il~~ll~~dligf~~~~~~~~Fl~~~~ 215 (803)
+.++.++|.+..-...+... .+..++.+-+|-.|+...... +.. ......+-.||+|-..+....+.+..
T Consensus 100 ~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~~--~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~--- 170 (373)
T cd04950 100 GFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGGP--PELLEAERRLLKRADLVFTTSPSLYEAKRR--- 170 (373)
T ss_pred CCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCCC--HHHHHHHHHHHHhCCEEEECCHHHHHHHhh---
Confidence 43347888875544444444 456778888776665432110 100 11223345688887777655543221
Q ss_pred HHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHH
Q 003682 216 RMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLL 295 (803)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~ 295 (803)
+ + .++.++|+|+|.+.|......+.. .+.+ ...++++|+++|++.+.+++. +|.
T Consensus 171 -----------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~ 224 (373)
T cd04950 171 -----------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLE 224 (373)
T ss_pred -----------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHH
Confidence 0 1 246679999999999753221110 1111 114678999999999976664 333
Q ss_pred HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccc
Q 003682 296 AMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECC 375 (803)
Q Consensus 296 A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~ 375 (803)
+ +.+.+|+++ |+++|... ...+ .. .+ . . .+.+.+.|.++.++++++|+.||++
T Consensus 225 ~---la~~~p~~~----~vliG~~~--~~~~---~~----~~----~------~-~~nV~~~G~~~~~~l~~~l~~~Dv~ 277 (373)
T cd04950 225 A---LAKARPDWS----FVLIGPVD--VSID---PS----AL----L------R-LPNVHYLGPKPYKELPAYLAGFDVA 277 (373)
T ss_pred H---HHHHCCCCE----EEEECCCc--CccC---hh----Hh----c------c-CCCEEEeCCCCHHHHHHHHHhCCEE
Confidence 3 334678775 88888431 0011 10 10 0 0 1235567789999999999999999
Q ss_pred eeccc-----ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHH
Q 003682 376 LVTAV-----RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSA 450 (803)
Q Consensus 376 v~~S~-----~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~a 450 (803)
++|+. ++++++..+||||| |.|||+|...++.+.. ++..+.+.|+++++++|.++
T Consensus 278 l~P~~~~~~~~~~~P~Kl~EylA~-------------------G~PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~~ 337 (373)
T cd04950 278 ILPFRLNELTRATSPLKLFEYLAA-------------------GKPVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEKA 337 (373)
T ss_pred ecCCccchhhhcCCcchHHHHhcc-------------------CCCEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHHH
Confidence 99985 35789999999999 5679988876554433 34445567999999999998
Q ss_pred hCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHH
Q 003682 451 LGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 451 L~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 487 (803)
|..+..++..+.. +...++|++.-++++++.|.+
T Consensus 338 l~~~~~~~~~~~~---~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 338 LLEDGPARERRRL---RLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HhcCCchHHHHHH---HHHHHCCHHHHHHHHHHHHHh
Confidence 7654433332221 257779988888888866553
No 115
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.45 E-value=8.9e-12 Score=139.33 Aligned_cols=191 Identities=14% Similarity=0.158 Sum_probs=124.1
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCHHHHHHHHHHHHHh----CCCCCCcE
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQ----NPSKRGKI 311 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~----~p~~~~~v 311 (803)
++.+++++|+.+.+... . ....+++++ +++++|+.+||....|++..+++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 45567888886543211 1 112355555 4688999999999999999999999876522 23322
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceee
Q 003682 312 VLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEY 391 (803)
Q Consensus 312 ~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea 391 (803)
.++++| +++ +++++++++.. + ..+ .+.|.++ ++..+|++||++|.+| .|+++.||
T Consensus 244 ~~vi~G-----~~~---~~~~~L~~~~~------~----~~v-~~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 VVVICG-----RNK---KLQSKLESRDW------K----IPV-KVRGFVT--NMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred EEEEEC-----CCH---HHHHHHHhhcc------c----CCe-EEEeccc--cHHHHHHhCCEEEECC----CcchHHHH
Confidence 234344 222 23333333200 0 123 4556654 7999999999999865 37899999
Q ss_pred eeeecCCcccccccCCCCCCCCCceEEecccc-----cccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHh
Q 003682 392 IICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-----GCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKH 465 (803)
Q Consensus 392 ~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~-----G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~ 465 (803)
||| |.|+|++... |.++.+ .+|.-+.+.|+++++++|.+++.++++.++.+.+..
T Consensus 299 ma~-------------------g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIR-------------------GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHc-------------------CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999 5679998852 323333 344444568999999999999987566666666777
Q ss_pred hcccccCCHHHHHHHHHH
Q 003682 466 YRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 466 ~~~v~~~~~~~W~~~~l~ 483 (803)
++....+....-++.+++
T Consensus 360 ~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 360 LKLARPEAVFDIVHDLHE 377 (382)
T ss_pred HHhcCCchHHHHHHHHHH
Confidence 777776766666655543
No 116
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.42 E-value=2.3e-12 Score=142.17 Aligned_cols=186 Identities=12% Similarity=0.106 Sum_probs=143.5
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCC-cEEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRG-KIVLVQIANP-ARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 351 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~-~v~lv~i~~~-~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~ 351 (803)
...++..+.|+.|.||+...|.||..+...-|+..- ...++..|.+ +.+...+..++..++.+++++.+ .+ .
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~-l~-----g 345 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD-LL-----G 345 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC-cc-----C
Confidence 378899999999999999999999999888765222 2344444432 43445566677777888877742 11 2
Q ss_pred cEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC--
Q 003682 352 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-- 429 (803)
Q Consensus 352 ~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-- 429 (803)
..++|....++.+.+.++..+.+.++++..|.||+|++|||+| |.|+|++..+|..|++
T Consensus 346 ~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-------------------glPvvAt~~GGP~EiV~~ 406 (495)
T KOG0853|consen 346 QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-------------------GLPVVATNNGGPAEIVVH 406 (495)
T ss_pred ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-------------------CCCEEEecCCCceEEEEc
Confidence 4677766788888888888888899999899999999999999 5679999999999999
Q ss_pred -CCCceeCCCCHH---HHHHHHHHHhCCCHHHHHHHHHHhhccccc-CCHHHHHHHHHHHHH
Q 003682 430 -SGAIRVNPWNID---AVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQDLE 486 (803)
Q Consensus 430 -~~~~lvnP~d~~---~~a~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~ 486 (803)
..|++++| +.+ .+|++|.++.+.+.. +....+..+++|.+ +++++..+++.+.+.
T Consensus 407 ~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 407 GVTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred CCcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 34999999 666 599999999986655 77777788888877 877665555555544
No 117
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.29 E-value=6.8e-11 Score=120.75 Aligned_cols=111 Identities=16% Similarity=0.165 Sum_probs=81.4
Q ss_pred eecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCC
Q 003682 280 GVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 359 (803)
Q Consensus 280 ~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~ 359 (803)
++||+.+.||+..+++|+..+.+++|+++ ++++|... +.......+.. .+....+.+.+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~-----------~~~~~~v~~~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAA-----------LLLLDRVIFLGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHh-----------cCCcccEEEeCC
Confidence 89999999999999999999988887655 88888432 11111111111 111123344445
Q ss_pred C-CHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC
Q 003682 360 L-QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 429 (803)
Q Consensus 360 ~-~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l 429 (803)
+ +.+++..+++.||+++.||..||++.+++|||+| |.|+|+|+.++..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-------------------g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-------------------GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-------------------CCCEEEcCCCCcceEE
Confidence 5 5566667777799999999999999999999999 6789999999988765
No 118
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.25 E-value=9.4e-11 Score=126.56 Aligned_cols=198 Identities=18% Similarity=0.255 Sum_probs=141.0
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCC--CEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG--QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 316 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~--~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i 316 (803)
.+.+.|.|++++.+.... .....+ ..+++++||+.+.||+...++|+..+.+..++ +.++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~ 236 (381)
T COG0438 173 KIVVIPNGIDTEKFAPAR------------IGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIV 236 (381)
T ss_pred CceEecCCcCHHHcCccc------------cCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEE
Confidence 556789999998876320 000112 36899999999999999999999999887765 447777
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 317 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 317 ~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
|..... ...+.. ++.+.+. .+.+.+.+.++.+++..+|+.||++++||..||||++++|||+|
T Consensus 237 g~~~~~----~~~~~~----~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~-- 299 (381)
T COG0438 237 GDGPER----REELEK----LAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA-- 299 (381)
T ss_pred cCCCcc----HHHHHH----HHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc--
Confidence 744311 122222 3333221 23445577888889999999999999999999999999999998
Q ss_pred CCcccccccCCCCCCCCCceEEecccccccccCCC---CceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccC
Q 003682 397 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STH 472 (803)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~---~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~ 472 (803)
|.|+|+|...|..+.+.+ |+++++.|.+++++++..++++. +.+.......++.+ ..+
T Consensus 300 -----------------g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~ 361 (381)
T COG0438 300 -----------------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEF 361 (381)
T ss_pred -----------------CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhc
Confidence 567999999998888843 77888888999999999999877 33333333233333 567
Q ss_pred CHHHHHHHHHHHHHH
Q 003682 473 DVAYWARSFLQDLER 487 (803)
Q Consensus 473 ~~~~W~~~~l~~l~~ 487 (803)
++..-++.+.+.+..
T Consensus 362 ~~~~~~~~~~~~~~~ 376 (381)
T COG0438 362 SWERIAEQLLELYEE 376 (381)
T ss_pred CHHHHHHHHHHHHHH
Confidence 777766666555554
No 119
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.24 E-value=6.6e-10 Score=122.55 Aligned_cols=248 Identities=16% Similarity=0.122 Sum_probs=148.7
Q ss_pred HHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHH
Q 003682 129 ADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYAR 208 (803)
Q Consensus 129 a~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~ 208 (803)
+.++++..+| |+|+.|.... .++..+..+..+.|+.++.|..||.. . +.++ ...+|.|...++...+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhh
Confidence 3345566677 9999987654 34444544555677776555544421 0 1111 1125666555443222
Q ss_pred HHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcc
Q 003682 209 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMD 285 (803)
Q Consensus 209 ~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld 285 (803)
. -...++.++|+|+|.+.+... + . ++++ +++++|+.+++..
T Consensus 148 ~-------------------------~~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-------------------------FPKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-------------------------CCCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 011256678999998876521 1 0 2222 4677888999888
Q ss_pred cccCHHHHH-HHHHHHHHhCCCCCCcEEEE-EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHH
Q 003682 286 IFKGISLKL-LAMEQLLSQNPSKRGKIVLV-QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 363 (803)
Q Consensus 286 ~~Kgi~~~l-~A~~~ll~~~p~~~~~v~lv-~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~ 363 (803)
..|+...++ +|++.+. + ++ +.++ ++| ++ +.+++++.++++ + +.+.+.+.+ +
T Consensus 192 ~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G-----~g-~~~~l~~~~~~~--------~-----~~v~~~g~~--~ 244 (350)
T cd03785 192 GARAINEAVPEALAELL-R-KR----LQVIHQTG-----KG-DLEEVKKAYEEL--------G-----VNYEVFPFI--D 244 (350)
T ss_pred hHHHHHHHHHHHHHHhh-c-cC----eEEEEEcC-----Cc-cHHHHHHHHhcc--------C-----CCeEEeehh--h
Confidence 888887654 7776663 2 22 3333 344 22 233444433321 1 123455544 7
Q ss_pred HHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccc--------ccccC---CCC
Q 003682 364 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG--------CSPSL---SGA 432 (803)
Q Consensus 364 ~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G--------~~~~l---~~~ 432 (803)
++..+|+.||+++.+| | +.+++|||+| |.|+|++...| .++.+ ..|
T Consensus 245 ~~~~~l~~ad~~v~~s---g-~~t~~Eam~~-------------------G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g 301 (350)
T cd03785 245 DMAAAYAAADLVISRA---G-ASTVAELAAL-------------------GLPAILIPLPYAADDHQTANARALVKAGAA 301 (350)
T ss_pred hHHHHHHhcCEEEECC---C-HhHHHHHHHh-------------------CCCEEEeecCCCCCCcHHHhHHHHHhCCCE
Confidence 8999999999999876 3 5789999999 55688876543 12334 347
Q ss_pred ceeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 433 IRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 433 ~lvnP~--d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
+++++. |.++++++|.+++. +++.+....+..++++..+...+
T Consensus 302 ~~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 302 VLIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred EEEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHH
Confidence 899887 89999999999996 45555555666666666554443
No 120
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.20 E-value=1e-09 Score=121.93 Aligned_cols=251 Identities=14% Similarity=0.120 Sum_probs=144.1
Q ss_pred HHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHh--cCCEEeccC
Q 003682 126 KIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIGFHT 203 (803)
Q Consensus 126 ~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll--~~dligf~~ 203 (803)
..+++.+ +..+| |+|++|......+.+.+-.+..++|+....+-. -+.+.+. |+.+++.+-+. .+|++.-.+
T Consensus 76 ~~l~~~l-~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEELL-LEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHHH-HHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 4555543 45677 999999655555544444444567776432211 0111111 11122222111 156655556
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccC-ChhHHHHHhCCchHHHHHHHHHHHhC-C-CEEEEe
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGI-HIGQLQSVLNLPETEAKVAELQDQFK-G-QIVMLG 280 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gi-d~~~f~~~~~~~~~~~~~~~l~~~~~-~-~~iil~ 280 (803)
....+++++ .|. ...+|.++++|+ |...... ... ....++++++ + ..+++.
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~-~~~-----~~~~~~~~~~~~~~~vl~~ 203 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNV-EIA-----YSSPVLSEFGEDKRYILLT 203 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHH-hhc-----cchhHHHhcCCCCCEEEEe
Confidence 666555543 122 223677888886 4332221 110 1123344442 2 344444
Q ss_pred ecCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCC
Q 003682 281 VDDMD-IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 359 (803)
Q Consensus 281 V~Rld-~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~ 359 (803)
..|.. ..||+..+++|++++.+++|+++ ++.++.|. ++ ...++ ...++ ..+.+.+.+.
T Consensus 204 ~hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~~---~~~~~-------~~~~v~~~~~ 262 (365)
T TIGR00236 204 LHRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREPL---HKHLG-------DSKRVHLIEP 262 (365)
T ss_pred cCchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHHH---HHHhC-------CCCCEEEECC
Confidence 55653 45999999999999988888765 66555332 11 11111 11211 1122455567
Q ss_pred CCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEec-ccccccccCC-C-CceeC
Q 003682 360 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS-EFVGCSPSLS-G-AIRVN 436 (803)
Q Consensus 360 ~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S-~~~G~~~~l~-~-~~lvn 436 (803)
++..++..+|+.||+++.+| |.+..|||+| |.|+|++ +.+|..+.+. + ++++
T Consensus 263 ~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~-------------------g~PvI~~~~~~~~~e~~~~g~~~lv- 317 (365)
T TIGR00236 263 LEYLDFLNLAANSHLILTDS-----GGVQEEAPSL-------------------GKPVLVLRDTTERPETVEAGTNKLV- 317 (365)
T ss_pred CChHHHHHHHHhCCEEEECC-----hhHHHHHHHc-------------------CCCEEECCCCCCChHHHhcCceEEe-
Confidence 88999999999999999888 4457999999 5668885 5555555552 3 5566
Q ss_pred CCCHHHHHHHHHHHhCCC
Q 003682 437 PWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 437 P~d~~~~a~ai~~aL~~~ 454 (803)
|.|+++++++|.+++..+
T Consensus 318 ~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 318 GTDKENITKAAKRLLTDP 335 (365)
T ss_pred CCCHHHHHHHHHHHHhCh
Confidence 579999999999998744
No 121
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.20 E-value=5.3e-10 Score=123.88 Aligned_cols=257 Identities=15% Similarity=0.057 Sum_probs=157.3
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~F 210 (803)
++++..+| |+|+.|.....+. ..+..+..+.|+.++.|..+|.. .+.++. -.+|.+...+++- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~-~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGP-GGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhH-HHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 44566677 9999998554433 33444555778887766544421 011111 1244443332211 0
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCH
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi 290 (803)
. . ....++.++|+|+|.+.+.. +... ..+ ..-++.++|+.+|+....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~~---~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAPP---ARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cchh---hhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 11236778999999876542 1110 111 111367889999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 003682 291 SLKL-LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 369 (803)
Q Consensus 291 ~~~l-~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly 369 (803)
..++ +|++++.+. | ..++++|.+ +. +++.+.+ . . +.. +.+.+.+ +++..+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~g-----~~-~~~~~~~----~-----~---~~~--v~~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGKG-----DL-EEVRAAY----A-----A---GIN--AEVVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCCC-----cH-HHHHHHh----h-----c---CCc--EEEeehH--hhHHHHH
Confidence 7776 888777432 2 335666632 21 2222221 1 1 111 3455554 6899999
Q ss_pred HhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccc--------cccC---CCCceeCCC
Q 003682 370 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--------SPSL---SGAIRVNPW 438 (803)
Q Consensus 370 ~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~--------~~~l---~~~~lvnP~ 438 (803)
+.||+++.+| | +.+++|||+| |.|+|++...|. ++.+ ..|++++|.
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~-------------------g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~ 307 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAA-------------------GLPAILVPLPHAADDHQTANARALVDAGAALLIPQS 307 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHh-------------------CCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcc
Confidence 9999999877 3 5788999999 556777654321 2334 347889888
Q ss_pred C--HHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 439 N--IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 439 d--~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
| +++++++|.+++.. ++.++...+..+++....+...-++.+++.+
T Consensus 308 ~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 308 DLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 8 99999999999986 5555666666777777788888887776654
No 122
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.19 E-value=2.2e-09 Score=120.04 Aligned_cols=276 Identities=9% Similarity=0.096 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEe
Q 003682 121 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIG 200 (803)
Q Consensus 121 Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dlig 200 (803)
+...+..-..++++..+| |+|.+| +....++.+.+....++|+.... +.|-....| +.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~~~~~--------~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCLHKIW--------VHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCCCccc--------ccC---CCCEEE
Confidence 344444555667777788 899885 55566776666655566765333 222111111 111 478887
Q ss_pred ccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCE-
Q 003682 201 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQI- 276 (803)
Q Consensus 201 f~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~- 276 (803)
..+....+.+.+ .|+. ..++.++++.++ +.|.... .. ..+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~---------------~~ki~v~G~p~~-~~f~~~~---~~----~~~~~~~~l~~~~~~ 204 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVP---------------PEQVVETGIPIR-SSFELKI---NP----DIIYNKYQLCPNKKI 204 (380)
T ss_pred ECCHHHHHHHHH-----cCCC---------------hhHEEEECcccC-hHHcCcC---CH----HHHHHHcCCCCCCcE
Confidence 766554443332 1221 112223333333 2332111 11 1244444 2444
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEe
Q 003682 277 VMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 356 (803)
Q Consensus 277 iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~ 356 (803)
+++..|++...||+..+++++.. .|+++ +++++.. +++ +++++++++.+.+ ..+++
T Consensus 205 il~~~G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~- 260 (380)
T PRK13609 205 LLIMAGAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NEA----LKQSLEDLQETNP--------DALKV- 260 (380)
T ss_pred EEEEcCCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-
Confidence 56667999999999998888742 35443 6666521 122 3334444433211 12444
Q ss_pred cCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecc-ccccc----ccC-C
Q 003682 357 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE-FVGCS----PSL-S 430 (803)
Q Consensus 357 ~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~-~~G~~----~~l-~ 430 (803)
.|.+ +++..+|+.||+++. ++.|++++|||+| |.|+|++. ..|.. ..+ .
T Consensus 261 ~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~-------------------g~PvI~~~~~~g~~~~n~~~~~~ 315 (380)
T PRK13609 261 FGYV--ENIDELFRVTSCMIT----KPGGITLSEAAAL-------------------GVPVILYKPVPGQEKENAMYFER 315 (380)
T ss_pred Eech--hhHHHHHHhccEEEe----CCCchHHHHHHHh-------------------CCCEEECCCCCCcchHHHHHHHh
Confidence 4565 468899999999874 4558999999999 56788876 34421 122 3
Q ss_pred CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHH
Q 003682 431 GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 431 ~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
.|..+.+.|+++++++|.++++. ++.+..+.+..++....++....++.+++.+....
T Consensus 316 ~G~~~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~ 373 (380)
T PRK13609 316 KGAAVVIRDDEEVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVEP 373 (380)
T ss_pred CCcEEEECCHHHHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhhh
Confidence 45556678999999999999985 44455555566666677888888888877665543
No 123
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.15 E-value=5.3e-10 Score=115.25 Aligned_cols=315 Identities=15% Similarity=0.228 Sum_probs=192.8
Q ss_pred HHhHHHHHHHHHHHHHHHHhh-----cCCCCCeEEEeCcc-ccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHH
Q 003682 115 RSLWQAYVSVNKIFADKVMEV-----ISPDDDFVWVHDYH-LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDE 188 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~~-----~~~~~d~iwihDyh-l~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~ 188 (803)
...|..+.-.-|..+..|+.. +.| | |||-.-- -+.+|.+-| +.+.||+-+.|-|--+.+....+-.|+.
T Consensus 123 a~~~~hfTllgQaigsmIl~~Eai~r~~P--d-i~IDtMGY~fs~p~~r~--l~~~~V~aYvHYP~iS~DML~~l~qrq~ 197 (465)
T KOG1387|consen 123 ASTWKHFTLLGQAIGSMILAFEAIIRFPP--D-IFIDTMGYPFSYPIFRR--LRRIPVVAYVHYPTISTDMLKKLFQRQK 197 (465)
T ss_pred cccccceehHHHHHHHHHHHHHHHHhCCc--h-heEecCCCcchhHHHHH--HccCceEEEEecccccHHHHHHHHhhhh
Confidence 345666666666666555431 235 3 7775322 223444433 5678999999977666666544433321
Q ss_pred HHHHHhcCCEEeccCHhhHHHHHHHHHHHhCcee------cc-cCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchH
Q 003682 189 LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSY------QS-KRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPET 261 (803)
Q Consensus 189 il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~------~~-~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~ 261 (803)
- ++ ...---.|-|-|..-... .|-.. .+ .+..+.-.+..+.+.+ |+|+. +++.+.....+
T Consensus 198 s--~~-----l~~~KlaY~rlFa~lY~~-~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~lks~~~t--- 264 (465)
T KOG1387|consen 198 S--GI-----LVWGKLAYWRLFALLYQS-AGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDLKSKFGT--- 264 (465)
T ss_pred c--ch-----hhhHHHHHHHHHHHHHHh-ccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHHHHHhcc---
Confidence 1 11 111112344555432111 12110 00 0111111123333333 45543 55544432211
Q ss_pred HHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 003682 262 EAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPS--KRGKIVLVQIANPARGRGRDVQEVQSETHATVR 339 (803)
Q Consensus 262 ~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~--~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~ 339 (803)
.-.....+|++|.+.|.|++. .|+-++.++.+.|. ...++.|+++|+ .|+ ++-++..+.++.++.
T Consensus 265 ---------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a~ 331 (465)
T KOG1387|consen 265 ---------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLAE 331 (465)
T ss_pred ---------cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHHH
Confidence 013457899999999999999 77888888888887 334677887773 333 344455566777777
Q ss_pred HHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEe
Q 003682 340 RINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 419 (803)
Q Consensus 340 ~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~ 419 (803)
+++- ..-+.|.-.+|.+++..+|..|-+.+-+-..|-||+.+.||||+ |..+|+
T Consensus 332 ~L~i-------~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA-------------------GlIpi~ 385 (465)
T KOG1387|consen 332 ELKI-------PKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA-------------------GLIPIV 385 (465)
T ss_pred hcCC-------ccceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc-------------------CceEEE
Confidence 7553 23355667899999999999999999999999999999999998 233344
Q ss_pred cccccccccC----C---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHH
Q 003682 420 SEFVGCSPSL----S---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 488 (803)
Q Consensus 420 S~~~G~~~~l----~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 488 (803)
-..+|..-.+ + .|++. | +.++-|++|.++++++.++|....+..+..+.+++-+...++|.+.+...
T Consensus 386 h~SgGP~lDIV~~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 386 HNSGGPLLDIVTPWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred eCCCCCceeeeeccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 3444422222 1 26776 3 56789999999999999998887777787888887777777777655543
No 124
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.14 E-value=9.1e-10 Score=121.35 Aligned_cols=181 Identities=13% Similarity=0.078 Sum_probs=115.8
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHH-HHHHHHHHHhCCCCCCcEEEEEEecC
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK-LLAMEQLLSQNPSKRGKIVLVQIANP 319 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~-l~A~~~ll~~~p~~~~~v~lv~i~~~ 319 (803)
.++|+|+|...+... + . ...+ ..-+++++|+++||....|++... +.|++++.+. +++ ++.++
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~-~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~-- 216 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF-GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQT-- 216 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc-CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEEC--
Confidence 578999997655321 0 0 0111 111467889999999889997764 4788776542 222 33333
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCc
Q 003682 320 ARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 399 (803)
Q Consensus 320 ~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~ 399 (803)
|+++. +++++. +.+ .+...++.+. .. ++..+|+.||++|.+| | +.+++|||+|
T Consensus 217 --g~~~~-~~l~~~----~~~-------~~l~~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~----- 269 (348)
T TIGR01133 217 --GKNDL-EKVKNV----YQE-------LGIEAIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAA----- 269 (348)
T ss_pred --CcchH-HHHHHH----Hhh-------CCceEEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHc-----
Confidence 12221 333333 322 2222344444 22 7899999999999865 4 6899999999
Q ss_pred ccccccCCCCCCCCCceEEeccccccc-------ccC---CCCceeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHhhc
Q 003682 400 KLDMTLGLDPSTAKSSMLVVSEFVGCS-------PSL---SGAIRVNPWN--IDAVAEAMDSALGVSDAEKQMRHEKHYR 467 (803)
Q Consensus 400 ~~~~~~~~~~~~~~~g~vV~S~~~G~~-------~~l---~~~~lvnP~d--~~~~a~ai~~aL~~~~~er~~r~~~~~~ 467 (803)
|.|+|++...|.. +.+ ..|++++|.| +++++++|.+++. +++.++.+.+..++
T Consensus 270 --------------g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 270 --------------GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARK 334 (348)
T ss_pred --------------CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHh
Confidence 5678888765532 234 3488998876 9999999999996 45556666777777
Q ss_pred ccccCCHHHHHH
Q 003682 468 YVSTHDVAYWAR 479 (803)
Q Consensus 468 ~v~~~~~~~W~~ 479 (803)
++..+...++++
T Consensus 335 ~~~~~~~~~i~~ 346 (348)
T TIGR01133 335 LAKPDAAKRIAE 346 (348)
T ss_pred cCCccHHHHHHh
Confidence 777776666554
No 125
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.11 E-value=7.7e-09 Score=116.02 Aligned_cols=268 Identities=8% Similarity=0.076 Sum_probs=152.9
Q ss_pred HHHHHHhhcCCCCCeEEEeCccccchHHHHH-hhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhh
Q 003682 128 FADKVMEVISPDDDFVWVHDYHLMVLPTFLR-KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDY 206 (803)
Q Consensus 128 fa~~i~~~~~~~~d~iwihDyhl~llp~~lr-~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~ 206 (803)
-..++++..+| |+|.++ |...+-..++ +...++|+. +.++-|-....| +. -.+|.+-..+...
T Consensus 95 ~l~~~l~~~kP--DvVi~~--~p~~~~~~l~~~~~~~iP~~-~v~td~~~~~~w---------~~--~~~d~~~v~s~~~ 158 (391)
T PRK13608 95 KLINLLIKEKP--DLILLT--FPTPVMSVLTEQFNINIPVA-TVMTDYRLHKNW---------IT--PYSTRYYVATKET 158 (391)
T ss_pred HHHHHHHHhCc--CEEEEC--CcHHHHHHHHHhcCCCCCEE-EEeCCCCccccc---------cc--CCCCEEEECCHHH
Confidence 34455566788 898886 3332333333 344467774 345554211111 10 1478776666554
Q ss_pred HHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCC-EEEEeec
Q 003682 207 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQ-IVMLGVD 282 (803)
Q Consensus 207 ~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~-~iil~V~ 282 (803)
.+.+.. .|+. ..++.+.++.|+. .|.... . ...+++.+ +++ .+++++|
T Consensus 159 ~~~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G 210 (391)
T PRK13608 159 KQDFID-----VGID---------------PSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAG 210 (391)
T ss_pred HHHHHH-----cCCC---------------HHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECC
Confidence 443332 1221 1133344555553 343111 1 11233333 234 4667899
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCH
Q 003682 283 DMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQF 362 (803)
Q Consensus 283 Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~ 362 (803)
|+...||+..+++++ ++..|+++ +++++. ..+ ++.+++.+. .+. . ..+ .+.|.+
T Consensus 211 ~lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~----~--~~v-~~~G~~-- 264 (391)
T PRK13608 211 AFGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS----N--ENV-LILGYT-- 264 (391)
T ss_pred CcccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc----C--CCe-EEEecc--
Confidence 999999999999885 34445443 655542 222 122333221 111 1 123 455554
Q ss_pred HHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC------CCCceeC
Q 003682 363 YERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL------SGAIRVN 436 (803)
Q Consensus 363 ~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l------~~~~lvn 436 (803)
+++..+|+.||+++.. +.|+++.|||+| |.|+|++...+..+.. ..|.-+-
T Consensus 265 ~~~~~~~~~aDl~I~k----~gg~tl~EA~a~-------------------G~PvI~~~~~pgqe~~N~~~~~~~G~g~~ 321 (391)
T PRK13608 265 KHMNEWMASSQLMITK----PGGITISEGLAR-------------------CIPMIFLNPAPGQELENALYFEEKGFGKI 321 (391)
T ss_pred chHHHHHHhhhEEEeC----CchHHHHHHHHh-------------------CCCEEECCCCCCcchhHHHHHHhCCcEEE
Confidence 5799999999999863 458899999999 5678887543322221 2233333
Q ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHH
Q 003682 437 PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 437 P~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
+.|.++++++|.++++. ++.+..+.+..++....++....++.+++.+....
T Consensus 322 ~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 322 ADTPEEAIKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred eCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhh
Confidence 66999999999999974 45555666677777777888888888877766543
No 126
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.10 E-value=6e-09 Score=115.58 Aligned_cols=252 Identities=14% Similarity=0.073 Sum_probs=143.1
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEec--CC--CChhhhhcCCCcHHHHHHHhcCCEE
Q 003682 124 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS--PF--PSSEIYRTLPIRDELLRALLNADLI 199 (803)
Q Consensus 124 vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~--pf--P~~~~~~~lp~~~~il~~ll~~dli 199 (803)
....+.+.+.+. +| |+|++|++....++..+..+..++|+....|- +| +.++. .....+.. .+|.+
T Consensus 76 ~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~~~~~~~-----~~r~~~~~--~ad~~ 145 (363)
T cd03786 76 LLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDRGMPDE-----ENRHAIDK--LSDLH 145 (363)
T ss_pred HHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCCCCCCch-----HHHHHHHH--Hhhhc
Confidence 344455555444 77 99999988766676666555557888765541 11 11110 00111111 24555
Q ss_pred eccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccC-ChhHHHHHhCCchHHHHHHHHHHHh---CCC
Q 003682 200 GFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGI-HIGQLQSVLNLPETEAKVAELQDQF---KGQ 275 (803)
Q Consensus 200 gf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gi-d~~~f~~~~~~~~~~~~~~~l~~~~---~~~ 275 (803)
..-+....+++.. .| ....++.++++++ |...+....... ...++.+ .++
T Consensus 146 ~~~s~~~~~~l~~-----~G---------------~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~ 199 (363)
T cd03786 146 FAPTEEARRNLLQ-----EG---------------EPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKK 199 (363)
T ss_pred cCCCHHHHHHHHH-----cC---------------CCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCC
Confidence 4444443333332 12 1223566677764 544433211100 1111222 345
Q ss_pred EEEEeecCccc---ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 276 IVMLGVDDMDI---FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 276 ~iil~V~Rld~---~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
.+++.++|+.. .||+..+++|++.+.++ ++.++..+. ++...++++. +.+.+.. .+
T Consensus 200 ~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~~l~~~----~~~~~~~------~~ 258 (363)
T cd03786 200 YILVTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRPRIREA----GLEFLGH------HP 258 (363)
T ss_pred EEEEEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHHHHHHH----HHhhccC------CC
Confidence 67788999875 79999999999887442 233554432 2222334333 3332210 12
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccc-cCCC
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSP-SLSG 431 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~-~l~~ 431 (803)
.+.+.+....+++..+|+.||++|.+|- | +..|||+| |.|+|++...+... .+.+
T Consensus 259 ~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~-------------------g~PvI~~~~~~~~~~~~~~ 314 (363)
T cd03786 259 NVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFL-------------------GVPVLNLRDRTERPETVES 314 (363)
T ss_pred CEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhc-------------------CCCEEeeCCCCccchhhhe
Confidence 3345556678899999999999999984 4 46899998 56688886555443 4455
Q ss_pred CceeCC-CCHHHHHHHHHHHhCCCHH
Q 003682 432 AIRVNP-WNIDAVAEAMDSALGVSDA 456 (803)
Q Consensus 432 ~~lvnP-~d~~~~a~ai~~aL~~~~~ 456 (803)
|..+.+ .|+++++++|.++++.+..
T Consensus 315 g~~~~~~~~~~~i~~~i~~ll~~~~~ 340 (363)
T cd03786 315 GTNVLVGTDPEAILAAIEKLLSDEFA 340 (363)
T ss_pred eeEEecCCCHHHHHHHHHHHhcCchh
Confidence 555444 3799999999999986543
No 127
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.09 E-value=3.3e-10 Score=109.52 Aligned_cols=74 Identities=24% Similarity=0.220 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCH--hH-HH
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDT--AE-IL 774 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~--~e-v~ 774 (803)
+|..+++.+++++ |+++++++++||+.||++|++.+|.++++.++.+ ..+..|+|++.++ ++ +.
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~----------~~~~~a~~i~~~~~~~g~~~ 142 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHP----------LLIPRADYVTRIAGGRGAVR 142 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCH----------HHHHhCCEEecCCCCCcHHH
Confidence 3899999999999 9999999999999999999999998644333211 1245688888654 33 88
Q ss_pred HHHHHHHHhh
Q 003682 775 RMLLGLAEAS 784 (803)
Q Consensus 775 ~~L~~l~~~~ 784 (803)
++++++.+..
T Consensus 143 ~~~~~~~~~~ 152 (154)
T TIGR01670 143 EVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHhh
Confidence 9998887654
No 128
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.05 E-value=4.3e-10 Score=112.00 Aligned_cols=109 Identities=23% Similarity=0.281 Sum_probs=81.6
Q ss_pred cCCeEEEEecCCcCCCCC----CCCCCCCHHHH---HHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEE
Q 003682 530 TKNRAILLDYDGTIMVPG----SISTSPNAEAV---AILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 602 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~----~~~~~is~~~~---~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~ 602 (803)
..+|+|+||+||||++.. .....+...+. .+++.| +++|+.++|+|||+...+..+++.+ ++..
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~----- 89 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTL---GITH----- 89 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCce-----
Confidence 359999999999999831 11333444333 788888 7789999999999999888877543 1100
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeE
Q 003682 603 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 682 (803)
Q Consensus 603 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 682 (803)
+ |. +
T Consensus 90 --------~---------------------f~----g------------------------------------------- 93 (183)
T PRK09484 90 --------L---------------------YQ----G------------------------------------------- 93 (183)
T ss_pred --------e---------------------ec----C-------------------------------------------
Confidence 0 00 0
Q ss_pred EEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 683 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 683 v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.-+|..+++.+++++ |++++++++|||+.||++|++.+|.+
T Consensus 94 -------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 94 -------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred -------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 012568899999999 99999999999999999999999974
No 129
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.97 E-value=7e-10 Score=104.52 Aligned_cols=128 Identities=21% Similarity=0.246 Sum_probs=88.7
Q ss_pred CEEEEeecCcccccCHHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 275 QIVMLGVDDMDIFKGISLKLL-AMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 275 ~~iil~V~Rld~~Kgi~~~l~-A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
..+|++.|++.+.||+..+++ |++++.+++|+++ |.++|..+ + + +.++ .. +.
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~--~----l~~~-~~-----------~~ 54 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D--E----LKRL-RR-----------PN 54 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS--------H----HCCH-HH-----------CT
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H--H----HHHh-cC-----------CC
Confidence 467999999999999999999 9999999999654 88888532 2 1 2221 01 12
Q ss_pred EEecCCCCHHHHHHHHHhcccceeccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC--
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-- 430 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-- 430 (803)
+.+.+.+ +++.++|+.||+++.|+. .++++..++|||++ |.|+|+|.. |..+.+.
T Consensus 55 v~~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-------------------G~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 55 VRFHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-------------------GKPVIASDN-GAEGIVEED 112 (135)
T ss_dssp EEEE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-------------------T--EEEEHH-HCHCHS---
T ss_pred EEEcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-------------------CCCEEECCc-chhhheeec
Confidence 3445566 689999999999999984 78999999999998 667999988 6666552
Q ss_pred -CCceeCCCCHHHHHHHHHHHhC
Q 003682 431 -GAIRVNPWNIDAVAEAMDSALG 452 (803)
Q Consensus 431 -~~~lvnP~d~~~~a~ai~~aL~ 452 (803)
.++.+ +.|+++++++|.+++.
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8899999999999875
No 130
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.92 E-value=3.7e-08 Score=110.08 Aligned_cols=134 Identities=18% Similarity=0.195 Sum_probs=88.3
Q ss_pred CCEE-EEee-cCcccccC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003682 274 GQIV-MLGV-DDMDIFKG-ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 350 (803)
Q Consensus 274 ~~~i-il~V-~Rld~~Kg-i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~ 350 (803)
++++ ++.. +|....|+ +..+++|++.+.+++|+++ +++++. +++..++++ +++.+. + +.
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~~~~----~~~~~~----~--~~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRREQIE----EALAEY----A--GL 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHHHHH----HHHhhc----C--CC
Confidence 4444 3333 47766544 6889999999988888654 666652 122222333 332221 0 11
Q ss_pred ccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEec----------
Q 003682 351 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS---------- 420 (803)
Q Consensus 351 ~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S---------- 420 (803)
.+.++. .++..+|+.||+++.+| |.+.+|+|+| |.|+|++
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~-------------------G~PvI~~~~~~~~~~~~ 296 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALL-------------------KVPMVVGYKVSPLTFWI 296 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHh-------------------CCCEEEEEccCHHHHHH
Confidence 133333 37899999999999998 6788899999 5667776
Q ss_pred -------ccccccccCCC-----CceeCCCCHHHHHHHHHHHhCCCH
Q 003682 421 -------EFVGCSPSLSG-----AIRVNPWNIDAVAEAMDSALGVSD 455 (803)
Q Consensus 421 -------~~~G~~~~l~~-----~~lvnP~d~~~~a~ai~~aL~~~~ 455 (803)
.+.|.++.+.+ +++.++.|++++++++.++|+.++
T Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 343 (380)
T PRK00025 297 AKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA 343 (380)
T ss_pred HHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH
Confidence 44455555532 367788899999999999998543
No 131
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=98.90 E-value=5e-07 Score=105.30 Aligned_cols=182 Identities=11% Similarity=0.114 Sum_probs=121.6
Q ss_pred CCCEEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLS--QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 350 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~--~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~ 350 (803)
++..+|..|.|+...||...++.+++++++ ++|+. .+.+|..|.+...+.. -.++.+.+.+++.+ -.+..
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~~--- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFRG--- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCCC---
Confidence 356799999999999999999999999986 55552 4677777755422211 12344445444432 01211
Q ss_pred ccEEEecCCCCHHHHHHHHHhccccee-ccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccccc
Q 003682 351 QPVVLIDTPLQFYERIAYYVIAECCLV-TAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 428 (803)
Q Consensus 351 ~~v~~~~~~~~~~~l~aly~~Adv~v~-~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~ 428 (803)
.|+++. ..+..--..++..||+++. ||. .|.-|+.-+=||.- |.+..|-.-|...+
T Consensus 459 -kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E 516 (601)
T TIGR02094 459 -RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGE 516 (601)
T ss_pred -CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCcccc
Confidence 355555 4555555589999999999 777 89999988777773 45666666665554
Q ss_pred C---CCCceeCC------------CCHHHHHHHHHHHh-C----C-----CHHHHHHHHHHhhcccccCCHHHHHHHHHH
Q 003682 429 L---SGAIRVNP------------WNIDAVAEAMDSAL-G----V-----SDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 429 l---~~~~lvnP------------~d~~~~a~ai~~aL-~----~-----~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 483 (803)
. .+|+.+.+ .|.+++-++|.+++ . . |..-...+.+.+......+++.+-++++.+
T Consensus 517 ~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~ 596 (601)
T TIGR02094 517 GYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVD 596 (601)
T ss_pred cCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 4 34888885 89999999998877 2 1 112233334444544556888888888776
Q ss_pred H
Q 003682 484 D 484 (803)
Q Consensus 484 ~ 484 (803)
.
T Consensus 597 ~ 597 (601)
T TIGR02094 597 K 597 (601)
T ss_pred H
Confidence 4
No 132
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.88 E-value=5.7e-09 Score=101.82 Aligned_cols=142 Identities=18% Similarity=0.114 Sum_probs=100.3
Q ss_pred CCeEEEEecCCcCCCCC---CC----CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEE
Q 003682 531 KNRAILLDYDGTIMVPG---SI----STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFV 603 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~---~~----~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i 603 (803)
.+|+++||+||||++.+ .. ....+.+--.+|+.| ++.|+.+.|+|+++...+...+..+ ++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~l---gi~------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEEL---KIK------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHHC---CCc-------
Confidence 38999999999999832 11 123456677888888 7789999999999888887777432 110
Q ss_pred EeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEE
Q 003682 604 RPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSV 683 (803)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 683 (803)
.|.. .
T Consensus 75 ------~~f~------------------------------------------~--------------------------- 79 (169)
T TIGR02726 75 ------RFHE------------------------------------------G--------------------------- 79 (169)
T ss_pred ------EEEe------------------------------------------c---------------------------
Confidence 0000 0
Q ss_pred EECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccc
Q 003682 684 KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKA 763 (803)
Q Consensus 684 ~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A 763 (803)
+. .|...++.+++++ +++++++++|||+.||++|++.+|.+++|.|+.+. .+..|
T Consensus 80 --------~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~----------lk~~A 134 (169)
T TIGR02726 80 --------IK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVAD----------VKEAA 134 (169)
T ss_pred --------CC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHH----------HHHhC
Confidence 01 3677899999999 99999999999999999999999987666554321 24668
Q ss_pred eeEeC--CHh-HHHHHHHHHHHh
Q 003682 764 KYYLD--DTA-EILRMLLGLAEA 783 (803)
Q Consensus 764 ~~~v~--~~~-ev~~~L~~l~~~ 783 (803)
+|++. +.+ .+.++++.+.+.
T Consensus 135 ~~I~~~~~~~g~v~e~~e~il~~ 157 (169)
T TIGR02726 135 AYVTTARGGHGAVREVAELILKA 157 (169)
T ss_pred CEEcCCCCCCCHHHHHHHHHHHh
Confidence 88764 233 356666666553
No 133
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.88 E-value=3.9e-08 Score=93.96 Aligned_cols=200 Identities=19% Similarity=0.222 Sum_probs=132.0
Q ss_pred HHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc-C-C-CCcEEecCcEE
Q 003682 526 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS-C-E-GLGIAAEHGYF 602 (803)
Q Consensus 526 ~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~-l-~-~l~lia~nGa~ 602 (803)
+++++..-|+.||.||||+. ....++++..+.|++| + +.+.+.++-|-..+.+.+.++. + . -....++||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l-r-~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL-R-KKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH-h-hheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45667778999999999999 7889999999999998 4 3689999999999888777743 1 2 23445899988
Q ss_pred EEeCCceeEEe-ecCC-CCccHHHHHHHHHHHHhh----cCCCceEeeccceEEEee--ccCCC----ccc-----hhhH
Q 003682 603 VRPNYGVDWET-CVSV-PDFSWKQIAEPVMKLYTE----TTDGSTIETKESALVWNF--QYADP----DFG-----SCQA 665 (803)
Q Consensus 603 i~~~~~~~~~~-~~~~-~~~~~~~~~~~i~~~y~~----~~~g~~ie~k~~~~~~~~--~~~d~----~~~-----~~~~ 665 (803)
-+..|...-.. +... .+..+++.+.-.+.|..+ ...|.++|.+...+...- +++.. +|. ...-
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 77665432111 1000 011122222222333332 124788888766554431 22221 111 1123
Q ss_pred HHHHHHHHHHhcCCCeEE-EECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeC----ChhhHHHHHHc
Q 003682 666 KELLDHLESVLANEPVSV-KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVI 736 (803)
Q Consensus 666 ~el~~~l~~~l~~~~~~v-~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD----~~NDi~Mf~~a 736 (803)
+.+.+.|++.+.+++... +.|.-.++|.|.|++|-.-++++-+. ..+.+..||| +.||.+.|..-
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~dp 229 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFADP 229 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeCC
Confidence 456788888888887655 45677899999999998888887553 3688999999 68999887643
No 134
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.87 E-value=5.2e-08 Score=96.58 Aligned_cols=192 Identities=18% Similarity=0.270 Sum_probs=125.3
Q ss_pred HHHHHHHhcCCCCeEEEEcCCChhhHHHHhh-c-C--CCCcEEecCcEEEEeCCceeEEeecCCC--CccHHHHHHHHHH
Q 003682 558 VAILDNLCRDPKNVVFLVSGKDRDTLAEWFS-S-C--EGLGIAAEHGYFVRPNYGVDWETCVSVP--DFSWKQIAEPVMK 631 (803)
Q Consensus 558 ~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~-~-l--~~l~lia~nGa~i~~~~~~~~~~~~~~~--~~~~~~~~~~i~~ 631 (803)
.+.|++| .+ .+.|.|+||-....+++.+. . + ....+.++||...+..+...|...+... +...++.+..++.
T Consensus 2 ~~~L~~L-~~-~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKL-RK-KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHH-HT-TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-Hh-cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 5678887 43 69999999999999888773 2 1 2235789999999999888886543110 1112222222333
Q ss_pred HHhh----cCCCceEeeccceEEEee--ccCCC----ccch-----hhHHHHHHHHHHHhcCCCeEE-EECCeEEEEEeC
Q 003682 632 LYTE----TTDGSTIETKESALVWNF--QYADP----DFGS-----CQAKELLDHLESVLANEPVSV-KSGPNIVEVKPQ 695 (803)
Q Consensus 632 ~y~~----~~~g~~ie~k~~~~~~~~--~~~d~----~~~~-----~~~~el~~~l~~~l~~~~~~v-~~g~~~vEI~p~ 695 (803)
+..+ ...|.++|.+...+.+.- +++.. .|.. ..-+.+++.|.+.|++..+.+ ..|...++|.|+
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~ 159 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPK 159 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEET
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccC
Confidence 3222 134889999988887753 22211 1110 112356778888888877654 567899999999
Q ss_pred CCCHHHHHHHHHHHhhhCCCCcccEEEEeC----ChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHh
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 771 (803)
Q Consensus 696 gv~Kg~al~~ll~~l~~~gi~~d~vla~GD----~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ 771 (803)
|++|..+|++|.+. ..+++++||| +.||.++|...+. .+.+ |.+++
T Consensus 160 GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p~ 209 (220)
T PF03332_consen 160 GWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSPE 209 (220)
T ss_dssp T-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSHH
T ss_pred CccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCHH
Confidence 99999999998653 2799999999 6999999987654 3332 67899
Q ss_pred HHHHHHHHHH
Q 003682 772 EILRMLLGLA 781 (803)
Q Consensus 772 ev~~~L~~l~ 781 (803)
+..+.|++|.
T Consensus 210 DT~~~l~~l~ 219 (220)
T PF03332_consen 210 DTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 135
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.81 E-value=7.2e-08 Score=104.10 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---CccceeEeC--CHh
Q 003682 697 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLD--DTA 771 (803)
Q Consensus 697 v~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~---~s~A~~~v~--~~~ 771 (803)
..|+.+++.+++++ |++++++++|||+.||++|++.+|.+ |++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGlg--------------iA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGLG--------------IAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCCe--------------EEeCCCHHHHhhCCEEecCcCHH
Confidence 46999999999999 99999999999999999999999975 344222 367888886 556
Q ss_pred HHHHHHH
Q 003682 772 EILRMLL 778 (803)
Q Consensus 772 ev~~~L~ 778 (803)
+|+-+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 6766654
No 136
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.80 E-value=1.7e-07 Score=107.73 Aligned_cols=147 Identities=10% Similarity=0.033 Sum_probs=112.9
Q ss_pred CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC---
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG--- 349 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~--- 349 (803)
.++.|.+++||| +.|-+..+|+|+.++++++|+.. |.+.|..+ . .++.+.+++++.++|..++...
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 456677777799 99999999999999999999876 77666432 1 2235556666666665532210
Q ss_pred -------------------cccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCC
Q 003682 350 -------------------YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPS 410 (803)
Q Consensus 350 -------------------~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~ 410 (803)
-...+.|.+..+..++...|..|.++|.+|..|||+ +.+|||+.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~---------------- 450 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA---------------- 450 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc----------------
Confidence 003567787777779999999999999999999999 99999997
Q ss_pred CCCCceEEecccccccccC---CCCceeCCCCHHHHHHHHHHHhCCCH
Q 003682 411 TAKSSMLVVSEFVGCSPSL---SGAIRVNPWNIDAVAEAMDSALGVSD 455 (803)
Q Consensus 411 ~~~~g~vV~S~~~G~~~~l---~~~~lvnP~d~~~~a~ai~~aL~~~~ 455 (803)
|-|+| .-|.++.+ .+|++| .|..++++||...|..+.
T Consensus 451 ---GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 451 ---GIPQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred ---CCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 44555 66777777 359999 689999999999998553
No 137
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.79 E-value=2e-08 Score=93.98 Aligned_cols=55 Identities=22% Similarity=0.308 Sum_probs=45.8
Q ss_pred EEEEecCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 534 AILLDYDGTIMVPGS-----ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 534 li~~DlDGTLl~~~~-----~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+++||+||||++..+ ....+.+.+.+.|++| ++.|+.++++|||....++.+++.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHH
Confidence 489999999998421 1127789999999998 777999999999999999988854
No 138
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.77 E-value=1.6e-07 Score=103.00 Aligned_cols=236 Identities=13% Similarity=0.042 Sum_probs=134.0
Q ss_pred HHhhcCCCCCeEEEeCccccc--hHH-HHHh-hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhH
Q 003682 132 VMEVISPDDDFVWVHDYHLMV--LPT-FLRK-RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYA 207 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~l--lp~-~lr~-~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~ 207 (803)
++..++| +|+|.+|..-+.. ++. ++++ +..++|+.+++|.-||..-... -.........+-.+|.|..++....
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~-~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN-YYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc-chhhHHHHHHHHhCCEEEECCHHHH
Confidence 4555777 5999999754332 222 2222 1126999999998776421110 0012223344556899988887655
Q ss_pred HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccc
Q 003682 208 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 287 (803)
Q Consensus 208 ~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~ 287 (803)
+.+.+ .|+. ..++.+.|+..+..... + +....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~-----~---------~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE-----L---------VKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc-----c---------cccccCCceEEEecChhhc
Confidence 54432 1221 01222233322221100 0 0111345689999999943
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 003682 288 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 367 (803)
Q Consensus 288 Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~a 367 (803)
.++. +..|+. .|+++|.+. +.. . ..+.+.+.|.++.+++..
T Consensus 182 ~~l~----------~~~~~~----~l~i~G~g~-----~~~-------~-------------~~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFLK----------NWSQGI----KLTVFGPNP-----EDL-------E-------------NSANISYKGWFDPEELPN 222 (333)
T ss_pred hHHH----------hcCCCC----eEEEECCCc-----ccc-------c-------------cCCCeEEecCCCHHHHHH
Confidence 3211 124443 477777432 111 0 012356777999999999
Q ss_pred HHHhcccceeccc-----------ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCc
Q 003682 368 YYVIAECCLVTAV-----------RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAI 433 (803)
Q Consensus 368 ly~~Adv~v~~S~-----------~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~ 433 (803)
+|+. |+.+++.- .-.++--..||||| |.|||++..++.++.+. .|+
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~-------------------G~PVI~~~~~~~~~~V~~~~~G~ 282 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA-------------------GLPVIVWSKAAIADFIVENGLGF 282 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC-------------------CCCEEECCCccHHHHHHhCCceE
Confidence 9988 66555331 11233336778999 67899999999998882 388
Q ss_pred eeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhc
Q 003682 434 RVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYR 467 (803)
Q Consensus 434 lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~ 467 (803)
+++ +.++++++|.++ +++++..+.++.++
T Consensus 283 ~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~ 311 (333)
T PRK09814 283 VVD--SLEELPEIIDNI---TEEEYQEMVENVKK 311 (333)
T ss_pred EeC--CHHHHHHHHHhc---CHHHHHHHHHHHHH
Confidence 887 678899998873 45555544444443
No 139
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.68 E-value=7.9e-08 Score=98.83 Aligned_cols=79 Identities=24% Similarity=0.298 Sum_probs=62.4
Q ss_pred EEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---
Q 003682 683 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 759 (803)
Q Consensus 683 v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~--- 759 (803)
+..+.....-+| +...+..+++.+ |.++++++++||+.+|+.|.+.+|. .+++|++|..
T Consensus 135 i~g~~~~~~~KP----~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~-----------~~v~v~~g~~~~~ 196 (220)
T COG0546 135 IVGGDDVPPPKP----DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGV-----------PAVGVTWGYNSRE 196 (220)
T ss_pred EEcCCCCCCCCc----CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCC-----------CEEEEECCCCCCc
Confidence 333444544455 677888999998 8888899999999999999999995 3478999852
Q ss_pred ---CccceeEeCCHhHHHHHHHH
Q 003682 760 ---PSKAKYYLDDTAEILRMLLG 779 (803)
Q Consensus 760 ---~s~A~~~v~~~~ev~~~L~~ 779 (803)
...|++++++..++...|..
T Consensus 197 ~l~~~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 197 ELAQAGADVVIDSLAELLALLAE 219 (220)
T ss_pred chhhcCCCEEECCHHHHHHHHhc
Confidence 25689999999999887753
No 140
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.68 E-value=1.3e-06 Score=103.82 Aligned_cols=183 Identities=11% Similarity=0.065 Sum_probs=121.6
Q ss_pred CEEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 275 QIVMLGVDDMDIFKGISLKLLAMEQLLS--QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 275 ~~iil~V~Rld~~Kgi~~~l~A~~~ll~--~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
..+|.++.|+...|+...++..++++.+ .+|+ ..+.+|..|.....+.. -.++.+.+.++... -++.. .
T Consensus 478 ~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~~----k 548 (778)
T cd04299 478 VLTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFRG----R 548 (778)
T ss_pred ccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCCC----c
Confidence 3489999999999999999999999865 3444 24778877754422211 12344444444331 02211 3
Q ss_pred EEEecCCCCHHHHHHHHHhcccceeccc--ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL- 429 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~--~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l- 429 (803)
|+++. ..+-.--..++..|||++.||. .|.-|+.-+=||. .|.+-+|-.-|.-.+.
T Consensus 549 Vvfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~--------------------NG~LnlSvlDGww~E~~ 607 (778)
T cd04299 549 IVFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL--------------------NGGLNLSVLDGWWDEGY 607 (778)
T ss_pred EEEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH--------------------cCCeeeecccCcccccc
Confidence 55555 4555555689999999999999 8988887766666 3668888888766655
Q ss_pred --CCCceeCC------------CCHHHHHHHHHHHhC----------CCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 430 --SGAIRVNP------------WNIDAVAEAMDSALG----------VSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 430 --~~~~lvnP------------~d~~~~a~ai~~aL~----------~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
.+|+.+.+ .|.+++.+.|.+.+- .|..-.+.+.+.+....-.+++.+.++++++.+
T Consensus 608 ~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 608 DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 34888887 556666677755443 133333334444555556789999999998887
Q ss_pred HH
Q 003682 486 ER 487 (803)
Q Consensus 486 ~~ 487 (803)
..
T Consensus 688 Y~ 689 (778)
T cd04299 688 YL 689 (778)
T ss_pred HH
Confidence 64
No 141
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.65 E-value=6.2e-07 Score=94.42 Aligned_cols=65 Identities=15% Similarity=0.175 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCCh-hhHHHHHHcchhcCCCCCCCCcceEEEEeCC-C-------CccceeEeCC
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K-------PSKAKYYLDD 769 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~-NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~-~-------~s~A~~~v~~ 769 (803)
+...++.+++++ +.+++++++|||+. +|+.+-+.+|. .++.|..|. . ...+.|++++
T Consensus 181 ~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~~G~-----------~~i~v~~G~~~~~~~~~~~~~pd~~~~s 246 (257)
T TIGR01458 181 SKTFFLEALRAT---GCEPEEAVMIGDDCRDDVGGAQDCGM-----------RGIQVRTGKYRPSDEEKINVPPDLTCDS 246 (257)
T ss_pred CHHHHHHHHHHh---CCChhhEEEECCCcHHHHHHHHHcCC-----------eEEEECCCCCChHHhcccCCCCCEEECC
Confidence 455778888888 99999999999995 99999999997 335666663 1 1347788999
Q ss_pred HhHHHHHH
Q 003682 770 TAEILRML 777 (803)
Q Consensus 770 ~~ev~~~L 777 (803)
..++.++|
T Consensus 247 l~el~~~l 254 (257)
T TIGR01458 247 LPHAVDLI 254 (257)
T ss_pred HHHHHHHH
Confidence 99988765
No 142
>PRK10444 UMP phosphatase; Provisional
Probab=98.61 E-value=1.1e-06 Score=91.73 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=49.9
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcE
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 595 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~l 595 (803)
+|+|+||+||||+. .+ .+.+.+.++|++| ++.|.+++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 44 6788999999999 889999999999999887777766544444
No 143
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.58 E-value=8.8e-08 Score=88.70 Aligned_cols=72 Identities=18% Similarity=0.220 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeC---CHhHHH
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLD---DTAEIL 774 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~---~~~ev~ 774 (803)
+|-.+.+.|++++ ++.++++.++||+.||+++|+.+|.++|..++.. ..+.+|.|++. ....|.
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~----------~v~~~a~~Vt~~~GG~GAvR 149 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHP----------LLKQRADYVTSKKGGEGAVR 149 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCcccccccCH----------HHHHhhHhhhhccCcchHHH
Confidence 3777888899999 9999999999999999999999998755433221 12456777763 334455
Q ss_pred HHHHHHHH
Q 003682 775 RMLLGLAE 782 (803)
Q Consensus 775 ~~L~~l~~ 782 (803)
++.+-+..
T Consensus 150 Ev~dlil~ 157 (170)
T COG1778 150 EVCDLILQ 157 (170)
T ss_pred HHHHHHHH
Confidence 55554444
No 144
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.57 E-value=4.2e-08 Score=100.46 Aligned_cols=68 Identities=19% Similarity=0.225 Sum_probs=57.4
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHh
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 771 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~ 771 (803)
-|...++++++++ +.+++++++|||+.+|+.+.+.+|. .+++|.+|.. ...|.|.+++..
T Consensus 139 p~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~-----------~~i~v~~g~~~~~~l~~~~~~~~i~~~~ 204 (214)
T PRK13288 139 PDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGT-----------KTAGVAWTIKGREYLEQYKPDFMLDKMS 204 (214)
T ss_pred CCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC-----------eEEEEcCCCCCHHHHhhcCcCEEECCHH
Confidence 3788999999999 9999999999999999999999997 3467877742 135889999999
Q ss_pred HHHHHHHH
Q 003682 772 EILRMLLG 779 (803)
Q Consensus 772 ev~~~L~~ 779 (803)
++.+++..
T Consensus 205 ~l~~~i~~ 212 (214)
T PRK13288 205 DLLAIVGD 212 (214)
T ss_pred HHHHHHhh
Confidence 99888754
No 145
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.55 E-value=5.7e-07 Score=94.22 Aligned_cols=54 Identities=22% Similarity=0.335 Sum_probs=45.6
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcC---CChhhHHHHhhcC
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG---KDRDTLAEWFSSC 590 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTG---R~~~~l~~~~~~l 590 (803)
+|.|+||+||||++ .+..++ .+.++|++| ++.|.+|+++|| |+...+.+.+..+
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 37899999999998 555554 799999998 889999999995 8899888887654
No 146
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.55 E-value=4.6e-07 Score=92.13 Aligned_cols=44 Identities=18% Similarity=0.211 Sum_probs=39.7
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.-.+-+|..+++.+++.+ |+++++++++|||.||++||+.+|..
T Consensus 139 ~~~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 139 ICDGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred ecCcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 334567999999999999 99999999999999999999999974
No 147
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.55 E-value=4.2e-08 Score=101.56 Aligned_cols=66 Identities=17% Similarity=0.145 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC--C-----ccceeEeCCHh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--P-----SKAKYYLDDTA 771 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~--~-----s~A~~~v~~~~ 771 (803)
+...+.++++++ |++++++++|||+.+|+.+.+.+|. .+++|.+|.. . ..|.|.++++.
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~-----------~~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGM-----------PSVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCC-----------cEEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 567799999999 9999999999999999999999997 3477888742 1 24889999999
Q ss_pred HHHHHHH
Q 003682 772 EILRMLL 778 (803)
Q Consensus 772 ev~~~L~ 778 (803)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9988775
No 148
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.52 E-value=1.7e-07 Score=90.58 Aligned_cols=52 Identities=12% Similarity=0.261 Sum_probs=45.5
Q ss_pred EEEEecCCcCCCCCCCC-----------CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH---HHhhc
Q 003682 534 AILLDYDGTIMVPGSIS-----------TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA---EWFSS 589 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~-----------~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~---~~~~~ 589 (803)
+|++|+||||++ ++ ..+++.+.++++++ +++|+.|+++|||+..... +++..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999998 44 57899999999998 8999999999999998874 66654
No 149
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.51 E-value=4.9e-07 Score=95.79 Aligned_cols=70 Identities=19% Similarity=0.292 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHh
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 771 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~ 771 (803)
.|..++..+++++ +++++++++|||+.+|+.+.+.+|. .+++|..|.. ...|.|.+++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~-----------~~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGL-----------IAVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCC-----------eEEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778899999999 9999999999999999999999997 3477778742 245899999999
Q ss_pred HHHHHHHHHH
Q 003682 772 EILRMLLGLA 781 (803)
Q Consensus 772 ev~~~L~~l~ 781 (803)
++..++.+|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999988775
No 150
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.48 E-value=2.3e-06 Score=96.55 Aligned_cols=103 Identities=9% Similarity=0.128 Sum_probs=67.0
Q ss_pred HHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC--------CCCcee
Q 003682 364 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--------SGAIRV 435 (803)
Q Consensus 364 ~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l--------~~~~lv 435 (803)
++..+.+.+|+.|+||.||..|.+++|+.|. |.|-|.|+.+|....+ ..|+.|
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-------------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~V 522 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-------------------GVPSITTNLSGFGCWMQEHIEDPEEYGVYV 522 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-------------------T--EEEETTBHHHHHHHTTS-HHGGGTEEE
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhc-------------------CCceeeccchhHHHHHHHhhccCcCCcEEE
Confidence 6788899999999999999999999999998 6789999999977544 125543
Q ss_pred -CC--CC----HHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 436 -NP--WN----IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 436 -nP--~d----~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
+= .+ ++++++.|.+...++..+|....++..+.-..-+|.+....+.+.-
T Consensus 523 vdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay 579 (633)
T PF05693_consen 523 VDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAY 579 (633)
T ss_dssp E-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 32 22 3567777777778888887766555554444456665555554443
No 151
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.45 E-value=3.4e-07 Score=97.29 Aligned_cols=70 Identities=20% Similarity=0.202 Sum_probs=57.0
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeC
Q 003682 695 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLD 768 (803)
Q Consensus 695 ~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~ 768 (803)
.+-.+...++.+++++ |++++++++|||+.+|+.+.+.+|. .+++|.+|.. ...|.+.++
T Consensus 155 ~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi-----------~~i~v~~G~~~~~~l~~~~~~~vi~ 220 (272)
T PRK13223 155 QKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGV-----------QCVALSYGYNHGRPIAEESPALVID 220 (272)
T ss_pred CCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCC-----------eEEEEecCCCCchhhhhcCCCEEEC
Confidence 3444777899999999 9999999999999999999999997 3467777731 246888999
Q ss_pred CHhHHHHHHH
Q 003682 769 DTAEILRMLL 778 (803)
Q Consensus 769 ~~~ev~~~L~ 778 (803)
+..++.+++.
T Consensus 221 ~l~el~~~~~ 230 (272)
T PRK13223 221 DLRALLPGCA 230 (272)
T ss_pred CHHHHHHHHh
Confidence 9999886655
No 152
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.45 E-value=3.8e-06 Score=89.67 Aligned_cols=59 Identities=20% Similarity=0.335 Sum_probs=44.3
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcE
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 595 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~l 595 (803)
+++|+||+||||++ ... +.+.+.++|++| +++|.+++++|+|+......+...+..+++
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 68999999999998 444 445599999999 888999999999886655554433333333
No 153
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.43 E-value=2.5e-06 Score=87.63 Aligned_cols=62 Identities=24% Similarity=0.370 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---CccceeEeC--CHhH
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLD--DTAE 772 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~---~s~A~~~v~--~~~e 772 (803)
.|+..++.+++++ +++++++++|||+.+|+++++.+|.. +.++.. +..|++.+. +..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~~--------------i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGLG--------------IAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCCe--------------EEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999999 99999999999999999999999874 334432 256788876 4455
Q ss_pred HHHH
Q 003682 773 ILRM 776 (803)
Q Consensus 773 v~~~ 776 (803)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5443
No 154
>PLN02645 phosphoglycolate phosphatase
Probab=98.43 E-value=5.4e-06 Score=89.88 Aligned_cols=60 Identities=22% Similarity=0.283 Sum_probs=48.0
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcE
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 595 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~l 595 (803)
.+++|+||+||||+. .+ .+.+.+.++|++| ++.|.+++++|+|+....+.++..+..+|+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 479999999999998 44 4568889999998 889999999999997766666654434444
No 155
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.39 E-value=5.7e-07 Score=92.76 Aligned_cols=67 Identities=24% Similarity=0.270 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHhH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 772 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~e 772 (803)
|..+++.+++++ +++++++++|||+.+|+++.+.+|.. ++.|.+|.. ...+.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 678899999999 99999999999999999999999973 366766632 2357899999999
Q ss_pred HHHHHHH
Q 003682 773 ILRMLLG 779 (803)
Q Consensus 773 v~~~L~~ 779 (803)
+...|.+
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9887753
No 156
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.36 E-value=2e-05 Score=88.13 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=82.5
Q ss_pred CCEEEE--eecCccc-ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003682 274 GQIVML--GVDDMDI-FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 350 (803)
Q Consensus 274 ~~~iil--~V~Rld~-~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~ 350 (803)
++++|+ +.+|..+ .|+++.+++|++.+.+++|+++ +++++.+. ...+.+ +++.... +. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~~~~----~~~~~~~----~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRRLQF----EQIKAEY----GP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhHHHH----HHHHHHh----CC-CC
Confidence 555553 4469988 7999999999999998888765 54443221 111122 2222221 11 11
Q ss_pred ccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecc---------
Q 003682 351 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE--------- 421 (803)
Q Consensus 351 ~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~--------- 421 (803)
.++.+.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++-
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G-------------------~P~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK-------------------TPMVVGYRMKPLTFLI 302 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC-------------------CCEEEEEcCCHHHHHH
Confidence 2444433 3567999999999999 66777999994 4455551
Q ss_pred --------cccccccCCC-C----ceeCCCCHHHHHHHHHHHhCCC
Q 003682 422 --------FVGCSPSLSG-A----IRVNPWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 422 --------~~G~~~~l~~-~----~lvnP~d~~~~a~ai~~aL~~~ 454 (803)
+.+.+..+.+ + ++-+-.+++.+++++.++|..+
T Consensus 303 ~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 303 ARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2233333322 1 2224456889999999999866
No 157
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.29 E-value=2.1e-06 Score=84.80 Aligned_cols=41 Identities=27% Similarity=0.442 Sum_probs=37.0
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHc
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI 736 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~a 736 (803)
.+.+.+|+.+++.+++.+ +++++++++||||.||++|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366788999999999988 89999999999999999999864
No 158
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.28 E-value=9.2e-06 Score=82.03 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
+|+.+++.+++.+ |+++++++++||+.+|++|++.+|..
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~~ 185 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADIS 185 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCCe
Confidence 5999999999998 99999999999999999999999974
No 159
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.24 E-value=3.7e-07 Score=93.23 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHhH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 772 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~e 772 (803)
+...+.++++++ |++++++++|||+.+|+.+.+.+|. .++.|..|.. ...|.+.+++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~-----------~~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGC-----------PSVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCC-----------eEEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 567899999999 9999999999999999999999997 3466766642 2458889999998
Q ss_pred HHHH
Q 003682 773 ILRM 776 (803)
Q Consensus 773 v~~~ 776 (803)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7664
No 160
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.22 E-value=1.7e-05 Score=84.06 Aligned_cols=71 Identities=10% Similarity=0.082 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhhhCCCC-cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------------------
Q 003682 699 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------------ 759 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~-~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------------------ 759 (803)
+...+..+++++ |+. ++++++|||+.+|+.+.+.+|. .+++|..|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~-----------~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGM-----------WTVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCC-----------EEEEEccCcccccCCHHHHHhcCHHHHH
Confidence 567888999998 985 6999999999999999999997 3477777743
Q ss_pred -----------CccceeEeCCHhHHHHHHHHHHHh
Q 003682 760 -----------PSKAKYYLDDTAEILRMLLGLAEA 783 (803)
Q Consensus 760 -----------~s~A~~~v~~~~ev~~~L~~l~~~ 783 (803)
...|.+.+++..++.++|..+...
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~ 260 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEAR 260 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHH
Confidence 234788999999999888766443
No 161
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.21 E-value=2.2e-06 Score=78.99 Aligned_cols=51 Identities=16% Similarity=0.296 Sum_probs=41.7
Q ss_pred eEEEEecCCcCCCCCC---CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH
Q 003682 533 RAILLDYDGTIMVPGS---ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 584 (803)
Q Consensus 533 kli~~DlDGTLl~~~~---~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~ 584 (803)
|+|++|+||||+.... ....+.+.++++|+++ ++.|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134778999999998 7889999999999987654
No 162
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.20 E-value=0.00058 Score=74.38 Aligned_cols=300 Identities=20% Similarity=0.268 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEEEeCcc----ccchHH--HHHhhCCCCeEEEEEecC---------CCChhhhhcCCCc
Q 003682 122 VSVNKIFADKVMEVISPDDDFVWVHDYH----LMVLPT--FLRKRFNRVKLGFFLHSP---------FPSSEIYRTLPIR 186 (803)
Q Consensus 122 ~~vN~~fa~~i~~~~~~~~d~iwihDyh----l~llp~--~lr~~~~~~~i~~flH~p---------fP~~~~~~~lp~~ 186 (803)
.+.+.+|+- ......|++..||+|-=- ...+|- -||++.|+.+|..+.-|| |++.-..+-+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 466777771 122334556899999554 333443 478899999999998776 4444333445633
Q ss_pred HH-HHHHH---hcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEE---------------------EEe
Q 003682 187 DE-LLRAL---LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV---------------------SIK 241 (803)
Q Consensus 187 ~~-il~~l---l~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~---------------------~v~ 241 (803)
.. .++.+ ...|+.-|.-.+.=-|++..|.+. |+. .+-.|+|-. ..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 22 22322 245666665555555666655442 111 111122111 111
Q ss_pred EecccCChhHHHHHhC---------------CchHHHHHHHHHHHhCC-CEEEEeecCcccccCHHHHHHHHHHHHHhCC
Q 003682 242 ILPVGIHIGQLQSVLN---------------LPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNP 305 (803)
Q Consensus 242 v~p~Gid~~~f~~~~~---------------~~~~~~~~~~l~~~~~~-~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p 305 (803)
+.-.-.|.++|..... .+........+|.++++ +++++..+.- ..--.-.+.++..+++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH--~GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTH--EGEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecCC--CchHHHHHHHHHHHHhhCC
Confidence 1122334444443221 12334556677888876 8999999883 3333447889999999999
Q ss_pred CCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC---C----CcccEEEecCCCCHHHHHHHHHhcccceec
Q 003682 306 SKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR---P----GYQPVVLIDTPLQFYERIAYYVIAECCLVT 378 (803)
Q Consensus 306 ~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~---~----~~~~v~~~~~~~~~~~l~aly~~Adv~v~~ 378 (803)
+.. +++ . | +.|+ --..+++++.+.+-+++. . .-++ +++... .-|+..+|+.||++.+-
T Consensus 260 ~~l----lIl-V-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~td-V~l~Dt--mGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LIL-V-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTD-VLLGDT--MGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EEE-e-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCc-EEEEec--HhHHHHHHhhccEEEEC
Confidence 763 333 2 2 3343 345667777776654432 1 1123 344433 45999999999997654
Q ss_pred -cc--ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecc----cccccccC---CCCceeCCCCHHHHHHHHH
Q 003682 379 -AV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE----FVGCSPSL---SGAIRVNPWNIDAVAEAMD 448 (803)
Q Consensus 379 -S~--~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~----~~G~~~~l---~~~~lvnP~d~~~~a~ai~ 448 (803)
|+ .-|.| ++|+.++ +.|+|... |.-+++.+ ++++.|+. .+.++.++.
T Consensus 325 GSlv~~GGHN--~LEpa~~-------------------~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~ 381 (419)
T COG1519 325 GSLVPIGGHN--PLEPAAF-------------------GTPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVE 381 (419)
T ss_pred CcccCCCCCC--hhhHHHc-------------------CCCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHH
Confidence 33 34555 5799998 45566543 33444444 23566764 777777777
Q ss_pred HHhCCCHHHHHHHHHHhhcccccC
Q 003682 449 SALGVSDAEKQMRHEKHYRYVSTH 472 (803)
Q Consensus 449 ~aL~~~~~er~~r~~~~~~~v~~~ 472 (803)
..+.. +++|..+.++....+.++
T Consensus 382 ~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 382 LLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HhcCC-HHHHHHHHHHHHHHHHHh
Confidence 76664 777777777777666554
No 163
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.20 E-value=1.6e-05 Score=79.09 Aligned_cols=66 Identities=17% Similarity=0.108 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC-----Cccc--eeEeCCHh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKA--KYYLDDTA 771 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~-----~s~A--~~~v~~~~ 771 (803)
+...+..+++.+ |++++++++|||+.+|+.+.+.+|.. ++.+..|.. ...+ .+++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 566788888988 99999999999999999999999973 356666642 2235 78888888
Q ss_pred HHHHHHH
Q 003682 772 EILRMLL 778 (803)
Q Consensus 772 ev~~~L~ 778 (803)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8877664
No 164
>PRK06769 hypothetical protein; Validated
Probab=98.20 E-value=8.8e-06 Score=80.27 Aligned_cols=65 Identities=12% Similarity=0.145 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------------CccceeE
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------PSKAKYY 766 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------------~s~A~~~ 766 (803)
+...+.++++++ +.+++++++|||+.+|+.+.+.+|. .++.|..|.. ...++|.
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi-----------~~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNA-----------TTILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCC-----------eEEEEecCCCchhhhhhhcccccCCCcch
Confidence 556778888888 9999999999999999999999997 3467777642 1247778
Q ss_pred eCCHhHHHHHH
Q 003682 767 LDDTAEILRML 777 (803)
Q Consensus 767 v~~~~ev~~~L 777 (803)
+++..++.++|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88888887765
No 165
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.17 E-value=4.1e-06 Score=87.80 Aligned_cols=74 Identities=18% Similarity=0.156 Sum_probs=56.3
Q ss_pred eEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC-
Q 003682 681 VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK- 759 (803)
Q Consensus 681 ~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~- 759 (803)
..+..+...-.-+| +...+.++++++ |++++++++|||+.+|+.+.+.+|. .+++|.+|..
T Consensus 152 d~iv~~~~~~~~KP----~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi-----------~~i~v~~g~~~ 213 (248)
T PLN02770 152 QAVIIGSECEHAKP----HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGM-----------PVVGLTTRNPE 213 (248)
T ss_pred cEEEecCcCCCCCC----ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCC-----------EEEEEeCCCCH
Confidence 34444443333344 667889999999 9999999999999999999999997 3467777642
Q ss_pred ----CccceeEeCCHhH
Q 003682 760 ----PSKAKYYLDDTAE 772 (803)
Q Consensus 760 ----~s~A~~~v~~~~e 772 (803)
...|.+.+++..+
T Consensus 214 ~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 214 SLLMEAKPTFLIKDYED 230 (248)
T ss_pred HHHhhcCCCEEeccchh
Confidence 2468889998888
No 166
>PRK11587 putative phosphatase; Provisional
Probab=98.15 E-value=5.6e-06 Score=85.02 Aligned_cols=61 Identities=10% Similarity=0.046 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---CccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~---~s~A~~~v~~~~ev 773 (803)
+.......++.+ |++++++++|||+.+|+.+.+.+|.. +++|..|.. ...|.+.+++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 567888888988 99999999999999999999999872 355555432 24577788877765
No 167
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.14 E-value=3.6e-05 Score=79.07 Aligned_cols=72 Identities=19% Similarity=0.156 Sum_probs=48.5
Q ss_pred CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHH
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILR 775 (803)
Q Consensus 696 gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~ 775 (803)
+..|..+++. + +..++++++|||+.||+.|.+.+|..++...+. ..-.....+.+.+++..++.+
T Consensus 146 ~~~K~~~l~~----~---~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~--------~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 146 GCCKPSLIRK----L---SDTNDFHIVIGDSITDLEAAKQADKVFARDFLI--------TKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred CCchHHHHHH----h---ccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHH--------HHHHHcCCCccccCCHHHHHH
Confidence 3457766654 4 677889999999999999999998743211000 000122345566789999999
Q ss_pred HHHHHHH
Q 003682 776 MLLGLAE 782 (803)
Q Consensus 776 ~L~~l~~ 782 (803)
.|+++.+
T Consensus 211 ~l~~~~~ 217 (219)
T PRK09552 211 ELKHLLE 217 (219)
T ss_pred HHHHHhc
Confidence 9988764
No 168
>PLN02954 phosphoserine phosphatase
Probab=98.11 E-value=5.5e-06 Score=85.38 Aligned_cols=66 Identities=20% Similarity=0.300 Sum_probs=49.6
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeC
Q 003682 695 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLD 768 (803)
Q Consensus 695 ~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~ 768 (803)
.+.+|..+++.+++++ +. +++++|||+.||+.|.+.++.. +.+++|.. ...|++.++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999999887 64 6899999999999997776542 34555531 134889999
Q ss_pred CHhHHHHHH
Q 003682 769 DTAEILRML 777 (803)
Q Consensus 769 ~~~ev~~~L 777 (803)
+.+++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 999887764
No 169
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.09 E-value=1.7e-05 Score=81.52 Aligned_cols=65 Identities=17% Similarity=0.151 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhhCCCC-cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcce-EEEEeCCC------CccceeEeCCH
Q 003682 699 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEV-FACTVGQK------PSKAKYYLDDT 770 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~-~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~-~~v~vG~~------~s~A~~~v~~~ 770 (803)
+...+..+++++ |++ ++++++|||+.+|+.+.+.+|.. + +++..|.. ...|.+.+++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 678999999998 987 79999999999999999999984 3 55666632 24577888888
Q ss_pred hHHHHHH
Q 003682 771 AEILRML 777 (803)
Q Consensus 771 ~ev~~~L 777 (803)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8877654
No 170
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.09 E-value=2.8e-05 Score=81.77 Aligned_cols=65 Identities=15% Similarity=0.165 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhhhCCCC-cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------------------
Q 003682 699 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------------ 759 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~-~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------------------ 759 (803)
+...+...++++ |+. ++++++|||+.+|+.+.+.+|. .+++|.+|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi-----------~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGM-----------WTVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCC-----------eEEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 567788888988 985 9999999999999999999997 3578887753
Q ss_pred -----------CccceeEeCCHhHHHHHH
Q 003682 760 -----------PSKAKYYLDDTAEILRML 777 (803)
Q Consensus 760 -----------~s~A~~~v~~~~ev~~~L 777 (803)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 134788888888876654
No 171
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.09 E-value=3.7e-06 Score=73.58 Aligned_cols=87 Identities=20% Similarity=0.253 Sum_probs=71.1
Q ss_pred cceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCC---CceeCCCCHHHHHHHHHHH
Q 003682 374 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNPWNIDAVAEAMDSA 450 (803)
Q Consensus 374 v~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~---~~lvnP~d~~~~a~ai~~a 450 (803)
+++.|+..+|+++..+|+||| |+|+|.+...+..+.+.. ++.++ |+++++++|..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 467788889999999999999 677888778888888833 56776 899999999999
Q ss_pred hCCCHHHHHHHHHHhhcccc-cCCHHHHHHHHH
Q 003682 451 LGVSDAEKQMRHEKHYRYVS-THDVAYWARSFL 482 (803)
Q Consensus 451 L~~~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 482 (803)
++ .+++++...++.++++. .|++.+-+++++
T Consensus 60 l~-~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LE-NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99 55667777777777776 689888888876
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.04 E-value=1.1e-05 Score=84.14 Aligned_cols=70 Identities=19% Similarity=0.249 Sum_probs=54.7
Q ss_pred CCeEEEEecCCcCCCCCCCCCCC---CHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC--C-CcEEecCcEEEE
Q 003682 531 KNRAILLDYDGTIMVPGSISTSP---NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE--G-LGIAAEHGYFVR 604 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~i---s~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~--~-l~lia~nGa~i~ 604 (803)
..++|+|||||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|+++...+...++.+. . ...+..+|....
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 468999999999999 55554 69999999999 99999999999999998888876542 1 134555555443
No 173
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.03 E-value=7e-06 Score=84.50 Aligned_cols=62 Identities=11% Similarity=0.075 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC-----ccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-----SKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~-----s~A~~~v~~~~ev 773 (803)
+...++.+++.+ |++++++++|||+.+|+++.+.+|.. ++.+.-+... ..|.+++.+..++
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 150 HPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHHH
Confidence 567899999999 99999999999999999999999973 3444444321 2567777777776
Q ss_pred H
Q 003682 774 L 774 (803)
Q Consensus 774 ~ 774 (803)
.
T Consensus 216 ~ 216 (222)
T PRK10826 216 T 216 (222)
T ss_pred h
Confidence 4
No 174
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=98.01 E-value=1.2e-05 Score=82.66 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCCh-hhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC-------ccceeEeCCH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------SKAKYYLDDT 770 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~-NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~-------s~A~~~v~~~ 770 (803)
+....+.+++++ |++++++++|||+. +|+.+.+.+|.. ++.|..|... ..+.+.+++.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK-----------TVWINQGKSSKMEDDVYPYPDYEISSL 217 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE-----------EEEECCCCCcccccccccCCCeeeCcH
Confidence 567889999999 99999999999997 999999999972 3445444321 2356777777
Q ss_pred hHH
Q 003682 771 AEI 773 (803)
Q Consensus 771 ~ev 773 (803)
.++
T Consensus 218 ~el 220 (221)
T TIGR02253 218 REL 220 (221)
T ss_pred Hhh
Confidence 664
No 175
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.00 E-value=2.8e-05 Score=85.23 Aligned_cols=71 Identities=11% Similarity=0.148 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---CccceeEeCCHhHH-H
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDDTAEI-L 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~---~s~A~~~v~~~~ev-~ 774 (803)
+.......++.+ |+.++++++|||+.+|+.+.+.+|. .+++|..+.. ...|.+.+++.+++ .
T Consensus 274 ~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm-----------~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 274 DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARM-----------KCVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCC-----------EEEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 677889999999 9999999999999999999999997 3456654431 13588899999998 5
Q ss_pred HHHHHHHHh
Q 003682 775 RMLLGLAEA 783 (803)
Q Consensus 775 ~~L~~l~~~ 783 (803)
..|+.|...
T Consensus 340 ~~l~~l~~~ 348 (381)
T PLN02575 340 VDLKNLADI 348 (381)
T ss_pred HHHhhhhhc
Confidence 666666653
No 176
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.97 E-value=3.1e-05 Score=81.58 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----CccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~~v~~~~ev~ 774 (803)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|. |.. ...|.+.+++..++.
T Consensus 167 ~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLS 231 (260)
T ss_pred CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHH
Confidence 567889999999 99999999999999999999999973 35554 432 245788899998876
Q ss_pred HHH
Q 003682 775 RML 777 (803)
Q Consensus 775 ~~L 777 (803)
..+
T Consensus 232 ~~~ 234 (260)
T PLN03243 232 VVD 234 (260)
T ss_pred HHH
Confidence 544
No 177
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.96 E-value=4e-05 Score=71.56 Aligned_cols=54 Identities=20% Similarity=0.239 Sum_probs=41.8
Q ss_pred eEEEEecCCcCCCCCC--CCC-------CCCHHHHHHHHHHhcCCCCeEEEEcCC-ChhhHHHHh
Q 003682 533 RAILLDYDGTIMVPGS--IST-------SPNAEAVAILDNLCRDPKNVVFLVSGK-DRDTLAEWF 587 (803)
Q Consensus 533 kli~~DlDGTLl~~~~--~~~-------~is~~~~~aL~~L~~~~g~~v~IaTGR-~~~~l~~~~ 587 (803)
|+|++|+||||++... ... .+-+.+.+.|+.| +++|+.++|+|++ +...+...+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHH
Confidence 6899999999998420 011 2467999999998 8899999999999 666555555
No 178
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.94 E-value=1.8e-05 Score=84.65 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC----ccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----SKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~----s~A~~~v~~~~ev~ 774 (803)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|..|... ..|++++++..++.
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhcc
Confidence 466889999999 99999999999999999999999973 4667666321 35888888887765
No 179
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.90 E-value=0.0001 Score=74.59 Aligned_cols=63 Identities=13% Similarity=0.088 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC---ccce-e-EeCCHh
Q 003682 697 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP---SKAK-Y-YLDDTA 771 (803)
Q Consensus 697 v~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~---s~A~-~-~v~~~~ 771 (803)
-.|...++.+. .. + .+++++|||.||++|++.+|.. |++..++ ..|. + .+.+.+
T Consensus 131 ~~K~~~l~~l~-~~---~---~~~v~vGDs~nDl~ml~~Ag~~--------------ia~~ak~~~~~~~~~~~~~~~~~ 189 (203)
T TIGR02137 131 DPKRQSVIAFK-SL---Y---YRVIAAGDSYNDTTMLSEAHAG--------------ILFHAPENVIREFPQFPAVHTYE 189 (203)
T ss_pred chHHHHHHHHH-hh---C---CCEEEEeCCHHHHHHHHhCCCC--------------EEecCCHHHHHhCCCCCcccCHH
Confidence 46988888874 44 4 3799999999999999999974 4555443 2222 2 346777
Q ss_pred HHHHHHHHH
Q 003682 772 EILRMLLGL 780 (803)
Q Consensus 772 ev~~~L~~l 780 (803)
+++..+..-
T Consensus 190 ~~~~~~~~~ 198 (203)
T TIGR02137 190 DLKREFLKA 198 (203)
T ss_pred HHHHHHHHH
Confidence 777766654
No 180
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.87 E-value=9.4e-05 Score=83.38 Aligned_cols=122 Identities=10% Similarity=0.065 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
...|+|++.+.++.|++. |=+ |.++ + +...+.++ .+ | ..++.+.+ +...++..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 889999999999999987 544 4333 1 11333333 12 2 24666665 44567999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccc-cccccCCCCceeCCCCHHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSLSGAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~-G~~~~l~~~~lvnP~d~~~~a~ai~~ 449 (803)
.||+++.+|..||+++...||+.. |-|++.-+.. |..+.+.+|.++++.|+++|+++|.+
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-------------------G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~~ 407 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-------------------NLLILGFEETAHNRDFIASENIFEHNEVDQLISKLKD 407 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-------------------CCcEEEEecccCCcccccCCceecCCCHHHHHHHHHH
Confidence 999999999999999999999996 3445555554 45555567999999999999999999
Q ss_pred HhCCCH
Q 003682 450 ALGVSD 455 (803)
Q Consensus 450 aL~~~~ 455 (803)
+|+.+.
T Consensus 408 lL~d~~ 413 (438)
T TIGR02919 408 LLNDPN 413 (438)
T ss_pred HhcCHH
Confidence 998764
No 181
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.84 E-value=5.2e-05 Score=75.04 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC-----ccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-----SKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~-----s~A~~~v~~~~ev 773 (803)
+...+..+++++ |++++++++|||+.+|+...+.+|.. .++.|..|... ..|++++++..++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHh
Confidence 566778888888 99999999999999999999999973 11466677431 3488999988877
Q ss_pred H
Q 003682 774 L 774 (803)
Q Consensus 774 ~ 774 (803)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
No 182
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.79 E-value=3.7e-05 Score=88.15 Aligned_cols=66 Identities=18% Similarity=0.162 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----CccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~~v~~~~ev~ 774 (803)
|...+...++++ +++++++|||+.+|+.+.+.+|.. +++|..|.. ...|+|.+++..++.
T Consensus 387 kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el~ 450 (459)
T PRK06698 387 KSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLELK 450 (459)
T ss_pred CcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHHH
Confidence 666788888765 468999999999999999999973 356666632 245889999999998
Q ss_pred HHHHHH
Q 003682 775 RMLLGL 780 (803)
Q Consensus 775 ~~L~~l 780 (803)
+++..+
T Consensus 451 ~~l~~~ 456 (459)
T PRK06698 451 GILSTV 456 (459)
T ss_pred HHHHHH
Confidence 877543
No 183
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.74 E-value=6.4e-05 Score=78.51 Aligned_cols=70 Identities=20% Similarity=0.245 Sum_probs=54.3
Q ss_pred CCeEEEEecCCcCCCCCCCCCCC---CHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC--C-CcEEecCcEEEE
Q 003682 531 KNRAILLDYDGTIMVPGSISTSP---NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE--G-LGIAAEHGYFVR 604 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~i---s~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~--~-l~lia~nGa~i~ 604 (803)
..++|+||+||||++ .+..+ ++.+.++|++| ++.|+.++|+|+.+...+...++.+. . ...+..+|....
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 358999999999999 66666 79999999999 89999999999888888888776542 1 123444554443
No 184
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.74 E-value=0.00014 Score=69.79 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
|...++.+++.+ +++++++++|||+..|+.+.+.+|.
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi 139 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGL 139 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCC
Confidence 677888999998 9999999999999999999999987
No 185
>PRK09449 dUMP phosphatase; Provisional
Probab=97.69 E-value=5e-05 Score=78.22 Aligned_cols=66 Identities=20% Similarity=0.095 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhhhCCCC-cccEEEEeCCh-hhHHHHHHcchhcCCCCCCCCcceEEEEeCC-C---CccceeEeCCHhH
Q 003682 699 KGLVAQHQLETMHQKGML-PDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K---PSKAKYYLDDTAE 772 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~-~d~vla~GD~~-NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~-~---~s~A~~~v~~~~e 772 (803)
+.....++++++ |+. ++++++|||+. +|+...+.+|.. ++.+..+. . ...+.+.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 566888999998 874 58999999997 799999999973 23343222 1 1357888999999
Q ss_pred HHHHHH
Q 003682 773 ILRMLL 778 (803)
Q Consensus 773 v~~~L~ 778 (803)
+.++|.
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 988764
No 186
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.67 E-value=0.00079 Score=66.19 Aligned_cols=58 Identities=21% Similarity=0.389 Sum_probs=45.7
Q ss_pred ccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCC
Q 003682 515 FRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKD 579 (803)
Q Consensus 515 ~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~ 579 (803)
+..++.+.+ ++..++++++|+||||+.. ....+.+.+.++|++| ++.|..++|+|+.+
T Consensus 12 ~~~i~~~~~----~~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 12 LNDLTIDLL----KKVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred hhhCCHHHH----HHCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 334555544 3467899999999999983 2336788999999998 88899999999987
No 187
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.64 E-value=0.00015 Score=70.90 Aligned_cols=50 Identities=20% Similarity=0.290 Sum_probs=37.7
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCC---------CCHHHHHHHHHHhcCCCCeEEEEcCCC
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTS---------PNAEAVAILDNLCRDPKNVVFLVSGKD 579 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~---------is~~~~~aL~~L~~~~g~~v~IaTGR~ 579 (803)
.|+.|++++|+||||+...+.... +-+.+.++|++| ++.|+.++|+|..+
T Consensus 10 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 10 KPQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred CCcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 356799999999999973211111 237789999998 88899999999754
No 188
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.63 E-value=0.00026 Score=73.01 Aligned_cols=70 Identities=16% Similarity=0.072 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC--CccceeEeCCHhHHHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--PSKAKYYLDDTAEILRM 776 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~--~s~A~~~v~~~~ev~~~ 776 (803)
+.....++++++ |++++++++|||+.+|+...+.+|... +++|..+.. ...+.....+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIRY----------CLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCeE----------EEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 467889999999 999999999999999999999999731 244555543 23344455777888887
Q ss_pred HHHHH
Q 003682 777 LLGLA 781 (803)
Q Consensus 777 L~~l~ 781 (803)
|+.|.
T Consensus 218 ~~~l~ 222 (224)
T PRK14988 218 IPSLM 222 (224)
T ss_pred hhhhc
Confidence 77664
No 189
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.62 E-value=0.00022 Score=71.81 Aligned_cols=60 Identities=17% Similarity=0.102 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHc--chhcCCCCCCCCcceEEEEeCCCC--ccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI--KSAAAGPSLSPVAEVFACTVGQKP--SKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~a--g~s~a~~~~~~~~~~~~v~vG~~~--s~A~~~v~~~~ev~ 774 (803)
|...+..+++++ | ++.+++|||+.+|+...+.+ |. .++.|.+|... -.+.|.+++..|+.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi-----------~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQL-----------PVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCC-----------cEEEecchhhccccchhhhhccHHHHh
Confidence 678999999998 7 78899999999999999998 87 34777777632 25557777777664
No 190
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.54 E-value=0.00024 Score=69.07 Aligned_cols=37 Identities=19% Similarity=0.097 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
|...+..+++.+ +++++++++|||+.+|+.+.+.+|.
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi 141 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGI 141 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCC
Confidence 667888899988 9999999999999999999999997
No 191
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.54 E-value=0.00095 Score=72.07 Aligned_cols=56 Identities=23% Similarity=0.388 Sum_probs=46.4
Q ss_pred CeEEEEecCCcCCCCCCC---------CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhh
Q 003682 532 NRAILLDYDGTIMVPGSI---------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 588 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~---------~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~ 588 (803)
.+++++|+||||...... +..+.+.+.++|++| ++.|..++++|||+....+..+.
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHHH
Confidence 579999999999973211 346788999999999 88899999999999988877764
No 192
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.54 E-value=0.00036 Score=69.46 Aligned_cols=43 Identities=26% Similarity=0.247 Sum_probs=34.6
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcC
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a 741 (803)
.+.|..|+..++.+.+.. +++++++||+.||+++.+.++..+|
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCcccc
Confidence 355678988888887642 6889999999999999999987543
No 193
>PLN02940 riboflavin kinase
Probab=97.49 E-value=0.00017 Score=80.27 Aligned_cols=62 Identities=15% Similarity=0.047 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----CccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~~v~~~~ev~ 774 (803)
+......+++.+ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. ...|.+.+++..++.
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHcC
Confidence 678899999999 99999999999999999999999973 456666542 245777888877754
No 194
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.35 E-value=0.00052 Score=71.75 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=40.7
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 584 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~ 584 (803)
+++.++||+||||.. ...+-+...++|++| +++|.+++++|-.+..+-+
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~~ 55 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSRE 55 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCHH
Confidence 458899999999997 556678999999999 9999999999876655444
No 195
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.32 E-value=0.0056 Score=63.64 Aligned_cols=50 Identities=26% Similarity=0.379 Sum_probs=41.9
Q ss_pred EEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEc---CCChhhHHHHhhc
Q 003682 535 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS---GKDRDTLAEWFSS 589 (803)
Q Consensus 535 i~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaT---GR~~~~l~~~~~~ 589 (803)
++||+||||++ .... .+.+.++|+.+ ++.|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~~-~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHKP-IPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCcc-CcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 4444 45889999998 88899999998 8999988877754
No 196
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.24 E-value=0.0016 Score=64.74 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+++++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 143 DPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 677889999999 9999999999999999999999987
No 197
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.15 E-value=0.0033 Score=61.72 Aligned_cols=56 Identities=21% Similarity=0.178 Sum_probs=43.0
Q ss_pred CeEEEEecCCcCCCCCC------C-----------------CCCCCHHHHHHHHHHhcCCCCeEEEEcCC-ChhhHHHHh
Q 003682 532 NRAILLDYDGTIMVPGS------I-----------------STSPNAEAVAILDNLCRDPKNVVFLVSGK-DRDTLAEWF 587 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~------~-----------------~~~is~~~~~aL~~L~~~~g~~v~IaTGR-~~~~l~~~~ 587 (803)
.||++||+|+||.++.. . ...+-+.+.+.|+.| +++|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 68999999999998541 0 012347888999998 8889999999988 777776666
Q ss_pred h
Q 003682 588 S 588 (803)
Q Consensus 588 ~ 588 (803)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 3
No 198
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=97.13 E-value=0.00046 Score=68.84 Aligned_cols=37 Identities=11% Similarity=-0.005 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+...+.++++++ |++++++++|||+.+|+...+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 667899999999 9999999999999999999999997
No 199
>PRK11590 hypothetical protein; Provisional
Probab=97.12 E-value=0.00087 Score=68.39 Aligned_cols=38 Identities=13% Similarity=0.179 Sum_probs=28.6
Q ss_pred CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 696 gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
|-.|...++.. + +.+.+...+.|||.||++||+.+++.
T Consensus 161 g~~K~~~l~~~---~---~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 161 GHEKVAQLERK---I---GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred ChHHHHHHHHH---h---CCCcceEEEecCCcccHHHHHhCCCC
Confidence 44565555544 3 45667789999999999999999974
No 200
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.11 E-value=0.004 Score=67.89 Aligned_cols=115 Identities=13% Similarity=0.120 Sum_probs=81.2
Q ss_pred CCeEEEEecCCcCCCCC--CC------CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEE
Q 003682 531 KNRAILLDYDGTIMVPG--SI------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 602 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~--~~------~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~ 602 (803)
.+|+|++|+|+||.... .. -..+.+.+.++|++| +++|+.++|||..+...+...+...+.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~---------- 70 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKD---------- 70 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCcc----------
Confidence 37999999999998732 01 012347899999998 889999999999988887777632100
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeE
Q 003682 603 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 682 (803)
Q Consensus 603 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 682 (803)
+... .++| ..
T Consensus 71 -----------~~~~------------~~~f-----------------------------------------------~~ 80 (320)
T TIGR01686 71 -----------FILQ------------AEDF-----------------------------------------------DA 80 (320)
T ss_pred -----------ccCc------------HHHe-----------------------------------------------eE
Confidence 0000 0000 00
Q ss_pred EEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 683 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 683 v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+..+ .. .|...++.+++.+ |++++++++|||+..|+.+.+.+.-
T Consensus 81 ~~~~-----~~----pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~lp 124 (320)
T TIGR01686 81 RSIN-----WG----PKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITLP 124 (320)
T ss_pred EEEe-----cC----chHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHCC
Confidence 0001 12 4999999999999 9999999999999999999988653
No 201
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.07 E-value=0.0029 Score=74.40 Aligned_cols=64 Identities=11% Similarity=0.185 Sum_probs=51.2
Q ss_pred HHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCC-CeEEEEcCCChhhHHHHhhcC
Q 003682 526 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK-NVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 526 ~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g-~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.....+.+++..||+++..-.-...+-+...++|++| ++.| +.++++||.+...++...+++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 344556788999999988752213456789999999998 8889 999999999999998888543
No 202
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=97.07 E-value=0.00028 Score=72.47 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
+......+++++ |++++++++|||+.+|+...+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 678899999999 99999999999999999999999973
No 203
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.04 E-value=0.00014 Score=72.38 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+++++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 456788899998 9999999999999999999999987
No 204
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.99 E-value=0.00085 Score=62.84 Aligned_cols=55 Identities=20% Similarity=0.285 Sum_probs=42.9
Q ss_pred eEEEEecCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCC--------hhhHHHHhh
Q 003682 533 RAILLDYDGTIMVPGS-----ISTSPNAEAVAILDNLCRDPKNVVFLVSGKD--------RDTLAEWFS 588 (803)
Q Consensus 533 kli~~DlDGTLl~~~~-----~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~--------~~~l~~~~~ 588 (803)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++ ...++..+.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~ 68 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQSGIGRGKFSSGRVARRLE 68 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCccccccHHHHHHHHHHHH
Confidence 6899999999996210 1245678899999998 88899999999998 555666554
No 205
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.98 E-value=0.001 Score=64.07 Aligned_cols=35 Identities=26% Similarity=0.328 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcc
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 737 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag 737 (803)
+...+.++++++ |+++ ++++|||+.+|+.+.+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 678899999999 9998 9999999999999988775
No 206
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.90 E-value=0.0094 Score=65.20 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
|...+..+++.+ +++++++++|||+.+|+...+.+|..
T Consensus 106 ~p~~l~~a~~~l---~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 106 KTGLVEEYLAEG---AIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 566788888887 89999999999999999999999973
No 207
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.89 E-value=0.0023 Score=66.16 Aligned_cols=69 Identities=16% Similarity=0.268 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHhcCCeEEEEecCCcCCCCCC---CCCC-CCH---------------------------HHHHHHHHHhc
Q 003682 518 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGS---ISTS-PNA---------------------------EAVAILDNLCR 566 (803)
Q Consensus 518 l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~---~~~~-is~---------------------------~~~~aL~~L~~ 566 (803)
.+++++.++....+.-.|+|||||||+++.+ .... +++ ...+.|+.+ +
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l-~ 127 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH-Q 127 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHH-H
Confidence 5678888887666656999999999998543 1001 121 267788887 8
Q ss_pred CCCCeEEEEcCC----ChhhHHHHh
Q 003682 567 DPKNVVFLVSGK----DRDTLAEWF 587 (803)
Q Consensus 567 ~~g~~v~IaTGR----~~~~l~~~~ 587 (803)
++|+.++++|+| ....++.++
T Consensus 128 ~~G~~i~iVTnr~~~k~~~~a~~ll 152 (237)
T TIGR01672 128 RRGDAIFFVTGRTPGKTDTVSKTLA 152 (237)
T ss_pred HCCCEEEEEeCCCCCcCHHHHHHHH
Confidence 889999999999 333444444
No 208
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.86 E-value=0.00092 Score=67.64 Aligned_cols=37 Identities=27% Similarity=0.275 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCCh-hhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~-NDi~Mf~~ag~ 738 (803)
+....+++++.+ |++++++++|||+. +|+...+.+|.
T Consensus 162 ~~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 162 DPKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 345788899999 99999999999997 99999999986
No 209
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.86 E-value=0.006 Score=75.28 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=47.8
Q ss_pred HHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+.+.....+++++-.||+++..-.-...+-+...++|++| ++.|+.++++||.+....+.+.+.
T Consensus 623 ~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~~ 686 (834)
T PRK10671 623 TAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAKE 686 (834)
T ss_pred HHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHH
Confidence 3344455678888889987631112345667888999998 888999999999999998888754
No 210
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.83 E-value=0.0056 Score=71.61 Aligned_cols=60 Identities=17% Similarity=0.204 Sum_probs=46.6
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCC-eEEEEcCCChhhHHHHhhcC
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKN-VVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~-~v~IaTGR~~~~l~~~~~~l 590 (803)
...+.++.-.||++...-.....+-+...++|++| ++.|+ +++++||.+....+...+.+
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHHc
Confidence 33466777778887642112456779999999998 88999 99999999999999988643
No 211
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=96.81 E-value=0.006 Score=76.58 Aligned_cols=61 Identities=11% Similarity=0.052 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC-----CccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~-----~s~A~~~v~~~~ev 773 (803)
+......+++++ |++++++++|||+.+|+...+.+|. .+++|..|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm-----------~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGM-----------RCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCC-----------EEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 577888999999 9999999999999999999999997 3466666532 24677888988885
No 212
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.76 E-value=0.002 Score=64.92 Aligned_cols=34 Identities=12% Similarity=-0.025 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 735 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ 735 (803)
+...+..+++.+ |++++++++|||+.+|+.+.+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 677788899998 9999999999999999988764
No 213
>PRK08238 hypothetical protein; Validated
Probab=96.74 E-value=0.011 Score=67.68 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+.+.+.+.|+++ ++.|.+++++||.+...++...+.
T Consensus 73 ~~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~~ 108 (479)
T PRK08238 73 YNEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAAH 108 (479)
T ss_pred CChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHH
Confidence 346778888887 888888888888888888777643
No 214
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=96.73 E-value=0.092 Score=56.49 Aligned_cols=200 Identities=19% Similarity=0.197 Sum_probs=109.2
Q ss_pred CHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCC--CHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC------
Q 003682 519 SIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSP--NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC------ 590 (803)
Q Consensus 519 ~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~i--s~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l------ 590 (803)
+..++..--+....+|+-||=|+||.+ +...+ +..++.-|-+| -..|+.|.|+|.=.+....++.+++
T Consensus 134 N~AQi~al~~~~~L~LvTFDgDvTLY~---DG~sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a 209 (408)
T PF06437_consen 134 NTAQIMALAKNYGLKLVTFDGDVTLYE---DGASLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEKYEERLHGLLDA 209 (408)
T ss_pred HHHHHHHhcccCCceEEEEcCCccccc---CCCCCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHHHHHHHHHHHHH
Confidence 334443332333679999999999998 34433 56666667776 6779999999998887766655443
Q ss_pred -C---CCc------E---EecCcEEEEeCCc----------eeEEeecCCCCccHH--------HHHHHHHHHHhhc--C
Q 003682 591 -E---GLG------I---AAEHGYFVRPNYG----------VDWETCVSVPDFSWK--------QIAEPVMKLYTET--T 637 (803)
Q Consensus 591 -~---~l~------l---ia~nGa~i~~~~~----------~~~~~~~~~~~~~~~--------~~~~~i~~~y~~~--~ 637 (803)
. .+. + .+|.-+..+.+.. ..|.. ..-..|. +.++..+....++ .
T Consensus 210 ~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~---~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~L 286 (408)
T PF06437_consen 210 FKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL---PEMKTWSEEDITELLDIAEAALRDCVKRLNL 286 (408)
T ss_pred HHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC---ccccCcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 111 1 1233334443332 12321 1111232 2223333444332 2
Q ss_pred CCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcC------CCeEEEEC--CeEEEEEeCCCCHHHHHHHHHHH
Q 003682 638 DGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLAN------EPVSVKSG--PNIVEVKPQGVNKGLVAQHQLET 709 (803)
Q Consensus 638 ~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~------~~~~v~~g--~~~vEI~p~gv~Kg~al~~ll~~ 709 (803)
| ..+-.|+-++.+.- ........++.+|+.-.+...+.. .++....| +-++||= ||.-|++.+.++
T Consensus 287 p-a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIG----dKs~GV~~lQ~y 360 (408)
T PF06437_consen 287 P-ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIG----DKSLGVRALQKY 360 (408)
T ss_pred C-eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcC----CcHHhHHHHHHH
Confidence 3 33344444443322 121223334556655444433322 34555554 3467775 499999988887
Q ss_pred hhh-CCCCcccEEEEeCC-----hhhHH
Q 003682 710 MHQ-KGMLPDFVLCIGDD-----RSDED 731 (803)
Q Consensus 710 l~~-~gi~~d~vla~GD~-----~NDi~ 731 (803)
+.. .+|.+.+++-+||- .||..
T Consensus 361 ~~~~~~i~~~~tLHVGDQF~s~GaNDfk 388 (408)
T PF06437_consen 361 FDPEGGIKPSETLHVGDQFLSAGANDFK 388 (408)
T ss_pred HHhccCCCccceeeehhhhhccCCcchh
Confidence 621 37999999999993 37754
No 215
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.72 E-value=0.018 Score=58.62 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 700 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 700 g~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
....+.+++++ |++++++++|||+..|+.+.+.+|.
T Consensus 155 p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 155 PRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred HHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 56788899999 9999999999999999999999997
No 216
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.71 E-value=0.0064 Score=57.76 Aligned_cols=66 Identities=21% Similarity=0.243 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 518 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 518 l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
++++.+ ++..+|-+++|+|.||++. .+...+++.++-+.++ ++.|+.++|+|--+...+..+...+
T Consensus 18 i~~~~L----~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 18 ITPDIL----KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CCHHHH----HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 455444 4667999999999999996 6778899999999998 9999999999999999998888544
No 217
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.62 E-value=0.013 Score=68.85 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=48.1
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+...+.++++.||+++..-.-...+.+...++|++| ++.|+.++++||.+...++...+.
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHH
Confidence 344688999999998752112456788999999998 888999999999999999888854
No 218
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.55 E-value=0.0048 Score=62.52 Aligned_cols=66 Identities=14% Similarity=0.247 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHhH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 772 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~e 772 (803)
|...++.+++++ |++++++++|||+.+|+.+.+.+|. .+++|.+|.. ...|.|.++++.+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi-----------~~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGT-----------ATVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCC-----------eEEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 678889999999 9999999999999999999999997 3478888852 3458899999999
Q ss_pred HHHHHH
Q 003682 773 ILRMLL 778 (803)
Q Consensus 773 v~~~L~ 778 (803)
+..++.
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887654
No 219
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.55 E-value=0.00083 Score=59.80 Aligned_cols=51 Identities=25% Similarity=0.419 Sum_probs=37.9
Q ss_pred EEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 535 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 535 i~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
|+||+||||.. ...+-|.+.++|++| ++.|.+++++|-.+...-..+...+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 68999999998 455677889999998 8889999999877755544444433
No 220
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=96.55 E-value=0.0027 Score=64.44 Aligned_cols=37 Identities=16% Similarity=0.198 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+-+.+.++|++| ++.|+.++++||.+......+...+
T Consensus 128 ~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~l 164 (215)
T PF00702_consen 128 LRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQL 164 (215)
T ss_dssp BHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHHT
T ss_pred chhhhhhhhhhh-hccCcceeeeecccccccccccccc
Confidence 456788999998 8889999999999999999888543
No 221
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.48 E-value=0.0085 Score=58.11 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
.|+.+++.+.+ +.+...++++||+.||++|..-+..
T Consensus 159 gKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~a 194 (227)
T KOG1615|consen 159 GKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADA 194 (227)
T ss_pred ccHHHHHHHHh-----CCChheeEEecCCccccccCCchhh
Confidence 69999999988 5778899999999999999877543
No 222
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.41 E-value=0.017 Score=68.36 Aligned_cols=66 Identities=15% Similarity=0.115 Sum_probs=50.6
Q ss_pred HHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 524 VSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 524 ~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.+.+...+.+++-.|++++.--.-...+-++..+++++| ++.|+.++++||........+.+++
T Consensus 418 ~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~l 483 (675)
T TIGR01497 418 VDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAEA 483 (675)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 34445555678888788887742113445778999999998 9999999999999999999998643
No 223
>PTZ00445 p36-lilke protein; Provisional
Probab=96.40 E-value=0.014 Score=58.15 Aligned_cols=157 Identities=16% Similarity=0.183 Sum_probs=93.9
Q ss_pred HHHHHHHHHhcCCeEEEEecCCcCCCC-C--CCCC---------CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHh
Q 003682 520 IDHIVSAYKRTKNRAILLDYDGTIMVP-G--SIST---------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF 587 (803)
Q Consensus 520 ~~~~~~~y~~~~~kli~~DlDGTLl~~-~--~~~~---------~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~ 587 (803)
.+.+.+.+++..+|+|++|+|.||++. + ..+. .++++.+..+++| ++.|+.|+|+|=-+...+
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~~---- 105 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKELI---- 105 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhhc----
Confidence 455666678889999999999999971 0 0222 2689999999998 899999999996554431
Q ss_pred hcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHH
Q 003682 588 SSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKE 667 (803)
Q Consensus 588 ~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~e 667 (803)
+. ..++.+|. | .+.++..++. ..-.. +.+. .+.| ..+.+ +-.+
T Consensus 106 ---~~----~~~~~~Is--g---------------~~li~~~lk~----s~~~~-~i~~---~~~y--yp~~w---~~p~ 148 (219)
T PTZ00445 106 ---PS----ENRPRYIS--G---------------DRMVEAALKK----SKCDF-KIKK---VYAY--YPKFW---QEPS 148 (219)
T ss_pred ---cc----cCCcceec--h---------------HHHHHHHHHh----cCccc-eeee---eeee--CCccc---CChh
Confidence 10 01111111 1 1122222211 11110 0000 1111 11111 1111
Q ss_pred HHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 668 LLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 668 l~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
....+ --+.|....|..=++++++.. |+.+++++.|=|+...++..+.+|.
T Consensus 149 ~y~~~-----------------gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 149 DYRPL-----------------GLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhh-----------------cccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 11111 114566667888889999999 9999999999999999999999987
No 224
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.34 E-value=0.026 Score=70.01 Aligned_cols=64 Identities=13% Similarity=0.149 Sum_probs=47.8
Q ss_pred HHHHhcCCeEEEEecCC-----cCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 525 SAYKRTKNRAILLDYDG-----TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDG-----TLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+.|.+...|++++=+++ |++.--.-..++-+.+.++|++| ++.|+.++++||.+......+..+
T Consensus 496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~~ 564 (884)
T TIGR01522 496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIARR 564 (884)
T ss_pred HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH
Confidence 34445567888877665 33321113456778999999997 999999999999999999999854
No 225
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.33 E-value=0.026 Score=68.45 Aligned_cols=65 Identities=9% Similarity=0.114 Sum_probs=50.7
Q ss_pred HHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.....+.+++=.||+++..-.-...+-+...++|++| ++.|+.++++||.+....+.+.+.+
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 3455556788888889987741112346778999999998 8899999999999999999998643
No 226
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.29 E-value=0.0034 Score=64.61 Aligned_cols=64 Identities=20% Similarity=0.281 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhhhCCCCcccEEEEeCC-hhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC-------ccceeEeCCHh
Q 003682 700 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------SKAKYYLDDTA 771 (803)
Q Consensus 700 g~al~~ll~~l~~~gi~~d~vla~GD~-~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~-------s~A~~~v~~~~ 771 (803)
...-+.+++++ |+++++++.|||+ .||+.-.+.+|.. +|-+.... ..+.+.+.+..
T Consensus 157 ~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~ 220 (229)
T COG1011 157 PEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLA 220 (229)
T ss_pred cHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHH
Confidence 35778888988 9999999999997 7787999999873 44333221 35667788888
Q ss_pred HHHHHHHH
Q 003682 772 EILRMLLG 779 (803)
Q Consensus 772 ev~~~L~~ 779 (803)
++.+.+..
T Consensus 221 ~l~~~~~~ 228 (229)
T COG1011 221 ELLDLLER 228 (229)
T ss_pred HHHHHHhh
Confidence 88877754
No 227
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=96.20 E-value=0.012 Score=49.18 Aligned_cols=59 Identities=20% Similarity=0.314 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhhhCCCCcccEEEEeCC-hhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC--------CccceeEeCCH
Q 003682 700 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDDT 770 (803)
Q Consensus 700 g~al~~ll~~l~~~gi~~d~vla~GD~-~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~--------~s~A~~~v~~~ 770 (803)
...+..+++.+ +++++++++|||+ .+|+.+.+.+|.. .+.|..|.. ...++|++++.
T Consensus 7 p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l 72 (75)
T PF13242_consen 7 PGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDL 72 (75)
T ss_dssp HHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSG
T ss_pred HHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCH
Confidence 34677888888 9999999999999 9999999999973 355666642 24688888887
Q ss_pred hH
Q 003682 771 AE 772 (803)
Q Consensus 771 ~e 772 (803)
.|
T Consensus 73 ~e 74 (75)
T PF13242_consen 73 KE 74 (75)
T ss_dssp GG
T ss_pred Hh
Confidence 65
No 228
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.10 E-value=0.082 Score=55.99 Aligned_cols=142 Identities=14% Similarity=0.143 Sum_probs=100.4
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQN---PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 350 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~---p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~ 350 (803)
...++++--...|..++.-++.|+..+-++. +.---++ |.+|+ |.||..+.+.++|++ ..|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~-----------~~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHE-----------KNL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHH-----------hcc
Confidence 3578889999999999999999998552211 1111123 33333 467888888888877 578
Q ss_pred ccEEEecCCCCHHHHHHHHHhcccce--ecccccCCCCC--ceeeeeeecCCcccccccCCCCCCCCCceEEeccccccc
Q 003682 351 QPVVLIDTPLQFYERIAYYVIAECCL--VTAVRDGMNLI--PYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 426 (803)
Q Consensus 351 ~~v~~~~~~~~~~~l~aly~~Adv~v--~~S~~EG~~lv--~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~ 426 (803)
+.|.+.+--++-++.+.++..||..| -||. -|+-|+ +....-| +-|+++-.|.=..
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-------------------glPvcA~~fkcl~ 377 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-------------------GLPVCAVNFKCLD 377 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-------------------CCceeeecchhHH
Confidence 88888888899999999999999754 5553 555554 3344444 4466666776555
Q ss_pred ccC---CCCceeCCCCHHHHHHHHHHHhCC
Q 003682 427 PSL---SGAIRVNPWNIDAVAEAMDSALGV 453 (803)
Q Consensus 427 ~~l---~~~~lvnP~d~~~~a~ai~~aL~~ 453 (803)
|.+ .+|++++ |.+++|+.|..+.+.
T Consensus 378 ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~ 405 (444)
T KOG2941|consen 378 ELVKHGENGLVFE--DSEELAEQLQMLFKN 405 (444)
T ss_pred HHHhcCCCceEec--cHHHHHHHHHHHHhc
Confidence 555 4699986 799999999999873
No 229
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.90 E-value=0.034 Score=55.18 Aligned_cols=95 Identities=19% Similarity=0.283 Sum_probs=61.7
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhH-HHHHHcchhcCCCCCCCCcceEEEE--eCCCC--c
Q 003682 687 PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDE-DMFEVIKSAAAGPSLSPVAEVFACT--VGQKP--S 761 (803)
Q Consensus 687 ~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi-~Mf~~ag~s~a~~~~~~~~~~~~v~--vG~~~--s 761 (803)
.+.....|++.-||..+.++.......|+..+.++++||+.||. +|++..+.-+||.. +.|.+. ....+ -
T Consensus 152 ~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR-----kgfpl~k~~~~~p~~~ 226 (256)
T KOG3120|consen 152 QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR-----KGFPLWKLISANPMLL 226 (256)
T ss_pred CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc-----CCCchHhhhhcCccee
Confidence 35556688999999999999887767799999999999999998 45554444444422 112110 00011 1
Q ss_pred cceeEe-CCHhHHHHHHHHHHHhhcc
Q 003682 762 KAKYYL-DDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 762 ~A~~~v-~~~~ev~~~L~~l~~~~~~ 786 (803)
+|.-.. .+-.++...|..+++..+.
T Consensus 227 kasV~~W~sg~d~~~~L~~lik~~~~ 252 (256)
T KOG3120|consen 227 KASVLEWSSGEDLERILQQLIKTIQV 252 (256)
T ss_pred eeeEEecccHHHHHHHHHHHHHHhhh
Confidence 222222 5778888888888776543
No 230
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=95.87 E-value=0.41 Score=52.11 Aligned_cols=209 Identities=13% Similarity=0.142 Sum_probs=110.2
Q ss_pred HhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCcc--ccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHH
Q 003682 116 SLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYH--LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL 193 (803)
Q Consensus 116 ~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyh--l~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~l 193 (803)
..|..|++.=+. +++. +| |++..=|+- =..|...||+.+|+.||..+.- |.+|.=-|.|...+..
T Consensus 69 ~llk~~~~~~~~----i~~~-kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~-----PsVWAWr~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRY----ILAN-KP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS-----PSVWAWRPKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHH----HHhc-CC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC-----cceeeechhhHHHHHH-
Confidence 456666554433 3332 56 777776763 3568889999999999998874 4555433555433333
Q ss_pred hcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-
Q 003682 194 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF- 272 (803)
Q Consensus 194 l~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~- 272 (803)
.+|++.--.+ +-..|.+. .|.. ..|=|++ =.|...+. +. .+..|+++
T Consensus 136 -~~D~lLailP-FE~~~y~k----~g~~---------~~yVGHp--------l~d~i~~~-----~~----r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILP-FEPAFYDK----FGLP---------CTYVGHP--------LADEIPLL-----PD----REAAREKLG 183 (381)
T ss_pred -HhhHeeeecC-CCHHHHHh----cCCC---------eEEeCCh--------hhhhcccc-----cc----HHHHHHHhC
Confidence 2454432222 11122210 1111 1222332 12211111 01 12244444
Q ss_pred ---CCCEEEEeec-Cc-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003682 273 ---KGQIVMLGVD-DM-DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 347 (803)
Q Consensus 273 ---~~~~iil~V~-Rl-d~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~ 347 (803)
..+.+.+..| |- +-..-++-.++|++++.+++|+.+ ++.-..+ +.++.+..+... .
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~---~------- 244 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEALK---W------- 244 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHhh---c-------
Confidence 3344444443 33 335566777889999999999987 5544432 233333332211 1
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 348 PGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 348 ~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
....+..++. ..+....+.+||+.+..| |.+.+|++.|+.|
T Consensus 245 ~~~~~~~~~~----~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P 285 (381)
T COG0763 245 EVAGLSLILI----DGEKRKAFAAADAALAAS-----GTATLEAALAGTP 285 (381)
T ss_pred cccCceEEec----CchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCC
Confidence 0000112222 346778899999999999 8899999999543
No 231
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=95.83 E-value=0.012 Score=53.45 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=42.6
Q ss_pred CCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC----ccceeEeCCHhHHHHHHHHH
Q 003682 714 GMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----SKAKYYLDDTAEILRMLLGL 780 (803)
Q Consensus 714 gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~----s~A~~~v~~~~ev~~~L~~l 780 (803)
+-+.+.++++||+.||+.|++.+..+ ++++..++.+ ..|++++.+..++++++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-----------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-----------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-----------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 55678999999999999999999864 2444444444 45888888999988887654
No 232
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.74 E-value=0.028 Score=56.00 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 555 AEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 555 ~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+.+.+.|+.+ ++.|..++|+||-+...++.+...
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~~ 125 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAER 125 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHHH
Confidence 5677888887 788999999999999888888754
No 233
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=95.72 E-value=0.74 Score=50.96 Aligned_cols=259 Identities=17% Similarity=0.248 Sum_probs=134.1
Q ss_pred HHHHHHHHhhcCCCCCeEEEeCcc--ccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccC
Q 003682 126 KIFADKVMEVISPDDDFVWVHDYH--LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHT 203 (803)
Q Consensus 126 ~~fa~~i~~~~~~~~d~iwihDyh--l~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~ 203 (803)
+..++.+. ..+| |+|..=||- =+.+...+|++++..||.++. +|.+|.==++|-..++.. +|.+-- .
T Consensus 72 ~~~~~~~~-~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~-i 140 (373)
T PF02684_consen 72 RKLVERIK-EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLV-I 140 (373)
T ss_pred HHHHHHHH-HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeE-C
Confidence 34444443 3467 888887884 355788999998888887766 355554346666666553 333211 1
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEE--EE
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIV--ML 279 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~i--il 279 (803)
+.+-..|.. +.| +...|=|++. +|.-. ..... ...++.+ .++++ ++
T Consensus 141 fPFE~~~y~------------~~g-~~~~~VGHPl--------~d~~~-----~~~~~----~~~~~~~l~~~~~iIaLL 190 (373)
T PF02684_consen 141 FPFEPEFYK------------KHG-VPVTYVGHPL--------LDEVK-----PEPDR----AEAREKLLDPDKPIIALL 190 (373)
T ss_pred CcccHHHHh------------ccC-CCeEEECCcc--------hhhhc-----cCCCH----HHHHHhcCCCCCcEEEEe
Confidence 112222332 111 1133334332 22111 00111 1112221 33332 33
Q ss_pred eecCcccccC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecC
Q 003682 280 GVDDMDIFKG-ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDT 358 (803)
Q Consensus 280 ~V~Rld~~Kg-i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~ 358 (803)
-=+|-...|- ++..++|.+++.+++|+++ ++....+. . ..+.+++.....+.. .+++..
T Consensus 191 PGSR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~-- 250 (373)
T PF02684_consen 191 PGSRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII-- 250 (373)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc--
Confidence 4466665554 4888999999999999876 66544332 1 122222222221110 122222
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCC-CCCceEEecccccccccCCCC-----
Q 003682 359 PLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPST-AKSSMLVVSEFVGCSPSLSGA----- 432 (803)
Q Consensus 359 ~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~-~~~g~vV~S~~~G~~~~l~~~----- 432 (803)
..+...+++.||+.+++| |.+.+|++..+.|.- ..-..++.+ -=+..+|-..+.|....+-+.
T Consensus 251 ---~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~V---v~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PE 319 (373)
T PF02684_consen 251 ---EGESYDAMAAADAALAAS-----GTATLEAALLGVPMV---VAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPE 319 (373)
T ss_pred ---CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEE---EEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchh
Confidence 235778899999999999 789999988855410 000000000 000112234555555555331
Q ss_pred ceeCCCCHHHHHHHHHHHhCCCHH
Q 003682 433 IRVNPWNIDAVAEAMDSALGVSDA 456 (803)
Q Consensus 433 ~lvnP~d~~~~a~ai~~aL~~~~~ 456 (803)
++-+-.+++.+++++...|..+..
T Consensus 320 liQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 320 LIQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred hhcccCCHHHHHHHHHHHhcCHHH
Confidence 444556889999999999986544
No 234
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.70 E-value=0.017 Score=59.66 Aligned_cols=61 Identities=16% Similarity=0.312 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHhcCCeEEEEecCCcCCCCCCC-------------------------------CCCCCHHHHHHHHHHhc
Q 003682 518 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGSI-------------------------------STSPNAEAVAILDNLCR 566 (803)
Q Consensus 518 l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~-------------------------------~~~is~~~~~aL~~L~~ 566 (803)
.+++++.++-...+.-.|+||+|||+++.++. ...+-+.+++.|+.| +
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L-~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMH-V 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHH-H
Confidence 56778877765555559999999999973220 001223477778887 7
Q ss_pred CCCCeEEEEcCCC
Q 003682 567 DPKNVVFLVSGKD 579 (803)
Q Consensus 567 ~~g~~v~IaTGR~ 579 (803)
++|+.++++|||+
T Consensus 128 ~~G~~I~iVTnR~ 140 (237)
T PRK11009 128 KRGDSIYFITGRT 140 (237)
T ss_pred HCCCeEEEEeCCC
Confidence 7788888888886
No 235
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.61 E-value=0.023 Score=58.12 Aligned_cols=51 Identities=18% Similarity=0.242 Sum_probs=41.3
Q ss_pred CCeEEEEecCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhh
Q 003682 531 KNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT 582 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~ 582 (803)
.+-.++||+|.|+++..+ .....-+.++++++.+ ++.|+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHH
Confidence 457899999999997321 1234568899999998 89999999999999766
No 236
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=95.58 E-value=0.012 Score=60.54 Aligned_cols=50 Identities=12% Similarity=0.166 Sum_probs=39.4
Q ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 682 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 682 ~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
.++.+.....-+| ....-...+++| |..|++|++|.|+.+.+...+.+|.
T Consensus 131 ~~v~~~dv~~~KP----~Pd~yL~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm 180 (221)
T COG0637 131 VIVTADDVARGKP----APDIYLLAAERL---GVDPEECVVVEDSPAGIQAAKAAGM 180 (221)
T ss_pred hhccHHHHhcCCC----CCHHHHHHHHHc---CCChHHeEEEecchhHHHHHHHCCC
Confidence 3444555555566 456667777888 9999999999999999999999997
No 237
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.55 E-value=0.063 Score=66.88 Aligned_cols=40 Identities=15% Similarity=0.308 Sum_probs=34.7
Q ss_pred CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 550 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 550 ~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..++-+.+.++|+++ ++.|++++++||.+......+.+.+
T Consensus 535 ~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~~ 574 (917)
T TIGR01116 535 LDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRRI 574 (917)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHHc
Confidence 345778999999997 9999999999999999999888543
No 238
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=95.54 E-value=0.11 Score=59.56 Aligned_cols=64 Identities=23% Similarity=0.356 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCC----CCccceeEeCCHh
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYLDDTA 771 (803)
Q Consensus 696 gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~----~~s~A~~~v~~~~ 771 (803)
..-|+..++.+-++- | ..+.||||+.||.+|++.|+.+ +++ +|+ +.-+|+|-+....
T Consensus 766 PtQKA~v~~llq~~t---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSItqF~ 826 (1051)
T KOG0210|consen 766 PTQKAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSITQFS 826 (1051)
T ss_pred hhHHHHHHHHHHHhh---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHHHHH
Confidence 345888888777765 3 6799999999999999999764 333 343 2356777666555
Q ss_pred HHHHHHH
Q 003682 772 EILRMLL 778 (803)
Q Consensus 772 ev~~~L~ 778 (803)
-|.++|-
T Consensus 827 Hv~rLLl 833 (1051)
T KOG0210|consen 827 HVSRLLL 833 (1051)
T ss_pred HHHHHhh
Confidence 5555553
No 239
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.42 E-value=0.066 Score=67.29 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
.++-+++.++|+++ ++.|+.|+++|||+...+..+.++
T Consensus 567 Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~~ 604 (997)
T TIGR01106 567 DPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKG 604 (997)
T ss_pred CCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH
Confidence 45678999999997 999999999999999999999854
No 240
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.25 E-value=0.092 Score=62.48 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=49.5
Q ss_pred HHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+...+.+++-.|++++.--.-...+-+++.+++++| ++.|+.++++||-+....+.+..++
T Consensus 418 ~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 418 DEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 3444455677777778887741112345778999999997 9999999999999999999998643
No 241
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.23 E-value=0.026 Score=58.89 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=42.6
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH--HHhhc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA--EWFSS 589 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~--~~~~~ 589 (803)
++++++||+||||.. ...+.+.+.++|++| ++.|.+++++|..+..... +.+..
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCChHHHHHHHHH
Confidence 468999999999997 345679999999999 8889999999886665433 44443
No 242
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.19 E-value=0.15 Score=63.95 Aligned_cols=137 Identities=16% Similarity=0.222 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHH
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVM 630 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~ 630 (803)
..+-+++.+++++| ++.|++++++||.+......+.++ +++...++..+. |. + .
T Consensus 578 Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~~---~GI~~~~~~vi~--G~------------~----~---- 631 (941)
T TIGR01517 578 DPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIARN---CGILTFGGLAME--GK------------E----F---- 631 (941)
T ss_pred CCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHH---cCCCCCCceEee--HH------------H----h----
Confidence 45778999999997 999999999999999999999854 445433221100 00 0 0
Q ss_pred HHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHh
Q 003682 631 KLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETM 710 (803)
Q Consensus 631 ~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l 710 (803)
+ ... . +++.+.+.+. .-+-.+.| -+|...++.+.+.
T Consensus 632 ~-----------------------~l~-------~----~el~~~i~~~-------~Vfar~sP--e~K~~iV~~lq~~- 667 (941)
T TIGR01517 632 R-----------------------RLV-------Y----EEMDPILPKL-------RVLARSSP--LDKQLLVLMLKDM- 667 (941)
T ss_pred h-----------------------hCC-------H----HHHHHHhccC-------eEEEECCH--HHHHHHHHHHHHC-
Confidence 0 000 0 1112222221 12334555 3588888887553
Q ss_pred hhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeC-C----CCccceeEeC--CHhHHHHHH
Q 003682 711 HQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-Q----KPSKAKYYLD--DTAEILRML 777 (803)
Q Consensus 711 ~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG-~----~~s~A~~~v~--~~~ev~~~L 777 (803)
| .-|.++||+.||.+|++.|.. ++++| . ++..|++++- +...+.+.+
T Consensus 668 ---g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ---G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ---C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 369999999999999999986 45555 2 2456778763 555555554
No 243
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.18 E-value=0.028 Score=54.61 Aligned_cols=48 Identities=23% Similarity=0.401 Sum_probs=37.1
Q ss_pred ccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHH
Q 003682 513 PNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 564 (803)
Q Consensus 513 ~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L 564 (803)
+.+..++.+.- ..++..+|.++||.|+||+.. ....++++..+.++++
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l 71 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL 71 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH
Confidence 34556666540 135678999999999999974 6778999999999997
No 244
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=95.17 E-value=0.099 Score=62.14 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=49.0
Q ss_pred HHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 521 DHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 521 ~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+...+.+.+...+.++.-.|++++.--.-...+-++..+++++| ++.|+.++++||-+......+.+++
T Consensus 410 ~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 410 DALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 33334454444566555457776641112345778999999997 9999999999999999999998643
No 245
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=95.05 E-value=0.087 Score=55.04 Aligned_cols=91 Identities=22% Similarity=0.454 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhhCC------CCeEEEEEec-CC----CChhhhhc--CC
Q 003682 119 QAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRFN------RVKLGFFLHS-PF----PSSEIYRT--LP 184 (803)
Q Consensus 119 ~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~~~------~~~i~~flH~-pf----P~~~~~~~--lp 184 (803)
.-|.-.++.-++.+... .+| |+|++||+|-.++|.+|+.... ++|+.+++|- -| |. +.+.. +|
T Consensus 114 ~rf~~fs~a~le~~~~l~~~p--DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~ 190 (245)
T PF08323_consen 114 ERFAFFSRAALELLKKLGWKP--DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLP 190 (245)
T ss_dssp HHHHHHHHHHHHHHCTCT-S---SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-G
T ss_pred HHHHHHHHHHHHHHHhhCCCC--CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCC
Confidence 34554555555554442 345 9999999999999999998753 6999999994 22 22 11111 23
Q ss_pred C--------------cHHHHHHHhcCCEEeccCHhhHHHHHH
Q 003682 185 I--------------RDELLRALLNADLIGFHTFDYARHFLS 212 (803)
Q Consensus 185 ~--------------~~~il~~ll~~dligf~~~~~~~~Fl~ 212 (803)
+ -.-+-.|+..||.|-.-++.|++.-++
T Consensus 191 ~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 191 DEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 1 124556899999999999999876544
No 246
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.03 E-value=0.19 Score=63.60 Aligned_cols=46 Identities=11% Similarity=0.198 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCc
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 600 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nG 600 (803)
..+.+++.++|++| ++.|++++++||.+......+.+ .++++..++
T Consensus 655 d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~---~~gii~~~~ 700 (1054)
T TIGR01657 655 NPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVAR---ECGIVNPSN 700 (1054)
T ss_pred cCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCCCc
Confidence 35778999999997 99999999999999999999885 455554443
No 247
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=95.01 E-value=0.018 Score=58.01 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 695 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 695 ~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.+-.|..+++.+++.. ++++++++++|||.+|++|++.+|..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567999999999988 99999999999999999999999975
No 248
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=95.01 E-value=0.039 Score=52.78 Aligned_cols=55 Identities=15% Similarity=0.295 Sum_probs=40.6
Q ss_pred EEEEecCCcCCCCC------C--CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhh---HHHHhhc
Q 003682 534 AILLDYDGTIMVPG------S--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT---LAEWFSS 589 (803)
Q Consensus 534 li~~DlDGTLl~~~------~--~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~---l~~~~~~ 589 (803)
++++|+||||+.+. + ......+.+.+..+++ +++|..++-+|+|+... .+.|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHH
Confidence 48999999999832 0 0113457788889998 89999999999999754 3455543
No 249
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=94.98 E-value=0.042 Score=55.48 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=39.7
Q ss_pred CCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----Ccccee-EeCCHhHHHHHHHHHHH
Q 003682 715 MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY-YLDDTAEILRMLLGLAE 782 (803)
Q Consensus 715 i~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~-~v~~~~ev~~~L~~l~~ 782 (803)
..++++++|||+.||++|.+.+|.+ |.++.. ...+.+ .+++..++.+.|.+...
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~~--------------v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADAG--------------ILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCCC--------------EEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 3457899999999999999999853 334432 123454 68899999888877654
No 250
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.98 E-value=0.015 Score=56.48 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=30.9
Q ss_pred eEEEEecCCcCCCCCCCC--------C-CCCHHHHHHHHHHhcCCCCeEEEEcC
Q 003682 533 RAILLDYDGTIMVPGSIS--------T-SPNAEAVAILDNLCRDPKNVVFLVSG 577 (803)
Q Consensus 533 kli~~DlDGTLl~~~~~~--------~-~is~~~~~aL~~L~~~~g~~v~IaTG 577 (803)
|+.+||+||||+...+.. - -..+.+.++|++| .+.|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeC
Confidence 689999999999743211 1 1345799999998 888898888874
No 251
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.76 E-value=0.13 Score=65.12 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecC
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEH 599 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~n 599 (803)
.++-+.+.++|+.| ++.|++++++||-.......+... .+++..+
T Consensus 630 D~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~---~~ii~~~ 674 (1057)
T TIGR01652 630 DKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYS---CRLLSRN 674 (1057)
T ss_pred hhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHH---hCCCCCC
Confidence 34567788888887 888999999999999999888743 4444433
No 252
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=94.61 E-value=0.0073 Score=58.59 Aligned_cols=98 Identities=15% Similarity=0.277 Sum_probs=47.1
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc-----HHHHHH-HhcCCEEeccCH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-----DELLRA-LLNADLIGFHTF 204 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~-----~~il~~-ll~~dligf~~~ 204 (803)
++++..+| |+|++|.++...+..+... +.|+.+++|.+++........... ..+.+. .-.+|.+-.-+.
T Consensus 74 ~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 74 RLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSH
T ss_pred HHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECH
Confidence 34455576 9999999987766554433 788999999887531111111111 111111 234676655554
Q ss_pred hhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHH
Q 003682 205 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQ 253 (803)
Q Consensus 205 ~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~ 253 (803)
...+.+.+ .|+. ..++.++|+|||.+.|+
T Consensus 149 ~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 149 STKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 44433332 2211 13678899999999884
No 253
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=94.60 E-value=0.23 Score=55.80 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=79.0
Q ss_pred EEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------cc
Q 003682 276 IVMLGVDD-MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINK---------IF 345 (803)
Q Consensus 276 ~iil~V~R-ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~---------~~ 345 (803)
.+++.-+| =+-.++++.+++|++++.++ |+ +.++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 45666677 44567888999999988655 44 3355444332 2333444433221 0000 00
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccc
Q 003682 346 GRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC 425 (803)
Q Consensus 346 ~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~ 425 (803)
.. ..+.++. ...++..+|+.||++|..| |.+..|+++++. |.|+--+.+-
T Consensus 277 ~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~-------------------P~Ilip~~~~ 326 (396)
T TIGR03492 277 QK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK-------------------PVIQLPGKGP 326 (396)
T ss_pred cc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC-------------------CEEEEeCCCC
Confidence 00 0122222 2457899999999999886 345589999844 4555432111
Q ss_pred ------ccc---C-CCCceeCCCCHHHHHHHHHHHhCCC
Q 003682 426 ------SPS---L-SGAIRVNPWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 426 ------~~~---l-~~~~lvnP~d~~~~a~ai~~aL~~~ 454 (803)
.+. + .+++.+...+.+.+++++.++++.+
T Consensus 327 q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 327 QFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred HHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 111 1 3455555677899999999998743
No 254
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.58 E-value=0.25 Score=62.73 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=33.0
Q ss_pred CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhh
Q 003682 550 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 588 (803)
Q Consensus 550 ~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~ 588 (803)
..++-+.+.+++++| ++.|+.++++||-.......+..
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHH
Confidence 345778899999998 89999999999999998888874
No 255
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.47 E-value=0.045 Score=57.54 Aligned_cols=54 Identities=28% Similarity=0.369 Sum_probs=40.7
Q ss_pred cCCeEEEEecCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH
Q 003682 530 TKNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 584 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~ 584 (803)
.+...|+||+|+|+++..+ ....+-+.+.+.|+.| .+.|..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 3457999999999997431 0123447788999998 8889999999999965444
No 256
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=94.20 E-value=0.063 Score=55.90 Aligned_cols=55 Identities=18% Similarity=0.177 Sum_probs=40.7
Q ss_pred CeEEEEecCCcCCCCCC-----------------C-------CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHh
Q 003682 532 NRAILLDYDGTIMVPGS-----------------I-------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF 587 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~-----------------~-------~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~ 587 (803)
.-.++||+|+|+++..+ . ....-+.+++..+.+ ++.|+.|+++|||+...-..-.
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhHHHHHH
Confidence 46999999999995210 1 223457888999997 8999999999999965433333
No 257
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=94.12 E-value=0.51 Score=57.62 Aligned_cols=64 Identities=14% Similarity=0.118 Sum_probs=46.0
Q ss_pred HHHhcCCeEEEEec---CC--cCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 526 AYKRTKNRAILLDY---DG--TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 526 ~y~~~~~kli~~Dl---DG--TLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.....|.+++=+ ++ +++.--.-..++-+++.+++++| ++.|+.++++||.+......+.+++
T Consensus 411 ~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~l 479 (755)
T TIGR01647 411 ELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARRL 479 (755)
T ss_pred HHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 33444567777655 33 44321113456778999999997 9999999999999999999998643
No 258
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=94.11 E-value=2.1 Score=47.49 Aligned_cols=73 Identities=10% Similarity=-0.003 Sum_probs=49.5
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-C
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G 431 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~ 431 (803)
.+.+.+.++..++.++++.|++++-.|. =|+ .||.+.+. |+|. ...=.+.+. +
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~-------------------Pvv~--l~~R~e~~~~g 316 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGV-------------------PTIN--IGTRQKGRLRA 316 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCC-------------------CEEe--ecCCchhhhhc
Confidence 4567778999999999999999885442 122 79999843 3442 222233332 2
Q ss_pred -C-ceeCCCCHHHHHHHHHHHhC
Q 003682 432 -A-IRVNPWNIDAVAEAMDSALG 452 (803)
Q Consensus 432 -~-~lvnP~d~~~~a~ai~~aL~ 452 (803)
. ++| +.|++++.+++.+++.
T Consensus 317 ~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 317 DSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred CeEEEe-CCCHHHHHHHHHHHhC
Confidence 2 447 6789999999999654
No 259
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.08 E-value=0.42 Score=59.33 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.++-+++.+++++| ++.|+.++++||-+......+.+++
T Consensus 549 Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~l 587 (902)
T PRK10517 549 DPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHEV 587 (902)
T ss_pred CcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 45678999999997 9999999999999999999998643
No 260
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=93.93 E-value=0.24 Score=62.38 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
..+-+.+.++++++ ++.|++|+++||........+.++
T Consensus 645 Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~~ 682 (1053)
T TIGR01523 645 DPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQE 682 (1053)
T ss_pred cCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHH
Confidence 35678999999997 999999999999999999999854
No 261
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=93.88 E-value=0.86 Score=47.73 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=43.0
Q ss_pred EEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC
Q 003682 692 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP 760 (803)
Q Consensus 692 I~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~ 760 (803)
++-.|.+||.++..+++++ |..|+.|+++-|+...+.-++.+=.. .+..++++.+....
T Consensus 156 lft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~~ 214 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGAE 214 (252)
T ss_pred EEeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcchh
Confidence 3456789999999999999 99999999999997666544433211 12356788887643
No 262
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=93.60 E-value=0.64 Score=57.65 Aligned_cols=39 Identities=13% Similarity=0.122 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..+-+++.++++++ ++.|+.++++||-+......+.+++
T Consensus 514 Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~l 552 (867)
T TIGR01524 514 DPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQEV 552 (867)
T ss_pred CCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 45678999999997 9999999999999999999988643
No 263
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.54 E-value=0.34 Score=56.29 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=46.0
Q ss_pred HHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 527 YKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 527 y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.....+.+++=+|++++..-.-...+-+.+.++++.| ++.|+.++++||..........+.+
T Consensus 322 ~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 322 LAQSGLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred HHhCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 44445576666678776641112445678888888888 7789999999999999998888643
No 264
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.51 E-value=0.44 Score=59.38 Aligned_cols=40 Identities=18% Similarity=0.435 Sum_probs=34.8
Q ss_pred CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 550 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 550 ~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..+|-+++.++++.+ ++.|++++.+||-.......+.+++
T Consensus 545 ~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 545 EDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred cCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHc
Confidence 445778999999996 9999999999999999999988654
No 265
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=93.44 E-value=0.73 Score=57.33 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..+-+++.++++++ ++.|+.++++||-+......+.+++
T Consensus 549 Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~l 587 (903)
T PRK15122 549 DPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICREV 587 (903)
T ss_pred CccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 45678999999997 9999999999999999999998643
No 266
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=93.39 E-value=0.045 Score=55.90 Aligned_cols=70 Identities=14% Similarity=0.086 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHHH
Q 003682 697 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRM 776 (803)
Q Consensus 697 v~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~ 776 (803)
..|..+++.+ +..++.+++|||+.||++|++.++..++...+.. .-.....+....++..+|.+.
T Consensus 143 ~~K~~~l~~~-------~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~--------~~~~~~~~~~~~~~f~di~~~ 207 (214)
T TIGR03333 143 CCKPSLIRKL-------SEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLN--------ECEELGLNHAPFQDFYDVRKE 207 (214)
T ss_pred CCHHHHHHHH-------hhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHH--------HHHHcCCCccCcCCHHHHHHH
Confidence 4588887765 3356789999999999999999987544221000 001122233446888999988
Q ss_pred HHHHH
Q 003682 777 LLGLA 781 (803)
Q Consensus 777 L~~l~ 781 (803)
|+++-
T Consensus 208 l~~~~ 212 (214)
T TIGR03333 208 LENVK 212 (214)
T ss_pred HHHHh
Confidence 87654
No 267
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=93.19 E-value=13 Score=40.90 Aligned_cols=137 Identities=15% Similarity=0.137 Sum_probs=84.8
Q ss_pred CEEEEeecCcccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 275 QIVMLGVDDMDIF-KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 275 ~~iil~V~Rld~~-Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
+.+++..-|-+-. +++...+.|+.++++++|+.. ++.-..+ + +-.++.. +.+++ -.+.
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~-~---~~v~e~~----------~~~L~---~~~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHP-R---PRVRELV----------LKRLK---NVER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCC-C---hhhhHHH----------HHHhC---CCCc
Confidence 4677777777766 999999999999999998764 4322222 1 2222222 11111 1223
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-C-
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G- 431 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~- 431 (803)
+.+..++...+...|+..|-+.+--| |-.--||-.-+.| ++++=+.+.=++.+. |
T Consensus 264 v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~P------------------vl~lR~~TERPE~v~agt 320 (383)
T COG0381 264 VKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKP------------------VLVLRDTTERPEGVEAGT 320 (383)
T ss_pred EEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCc------------------EEeeccCCCCccceecCc
Confidence 44555799999999999996655444 1123355554221 345555555555553 3
Q ss_pred CceeCCCCHHHHHHHHHHHhCCCHH
Q 003682 432 AIRVNPWNIDAVAEAMDSALGVSDA 456 (803)
Q Consensus 432 ~~lvnP~d~~~~a~ai~~aL~~~~~ 456 (803)
.++|+ .|.+.+.+++.++++++..
T Consensus 321 ~~lvg-~~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 321 NILVG-TDEENILDAATELLEDEEF 344 (383)
T ss_pred eEEeC-ccHHHHHHHHHHHhhChHH
Confidence 35665 4789999999999986544
No 268
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.93 E-value=0.16 Score=58.50 Aligned_cols=49 Identities=18% Similarity=0.162 Sum_probs=38.4
Q ss_pred CCeEEEEecCCcCCCCCCCC---------CCCCHHHHHHHHHHhcCCCCeEEEEcCCCh
Q 003682 531 KNRAILLDYDGTIMVPGSIS---------TSPNAEAVAILDNLCRDPKNVVFLVSGKDR 580 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~---------~~is~~~~~aL~~L~~~~g~~v~IaTGR~~ 580 (803)
..|+++||+||||+...+.. ..+.+.+.++|++| .+.|+.++|+|..+.
T Consensus 167 ~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQGG 224 (526)
T ss_pred cCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCcc
Confidence 46999999999999742110 12457889999999 899999999998665
No 269
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.93 E-value=0.2 Score=47.92 Aligned_cols=57 Identities=11% Similarity=0.070 Sum_probs=42.9
Q ss_pred CeEEEEecCCcCCCCCC-C-C----C-----------------CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhh
Q 003682 532 NRAILLDYDGTIMVPGS-I-S----T-----------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 588 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~-~-~----~-----------------~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~ 588 (803)
++++++|+||||+.... + . . .+-+.+.+.|+.| + .++.++|+|+.+...++..+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L-~-~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRA-S-ELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHH-H-hccEEEEEeCCcHHHHHHHHH
Confidence 57899999999998521 0 0 0 1246788899998 5 479999999999998888775
Q ss_pred cC
Q 003682 589 SC 590 (803)
Q Consensus 589 ~l 590 (803)
.+
T Consensus 80 ~l 81 (148)
T smart00577 80 LL 81 (148)
T ss_pred Hh
Confidence 43
No 270
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=92.91 E-value=0.013 Score=60.38 Aligned_cols=60 Identities=17% Similarity=0.234 Sum_probs=42.8
Q ss_pred cCCeEEEEecCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHH
Q 003682 530 TKNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 586 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~ 586 (803)
.....|+||+|+|+++..+ .....-+.+++.++.+ .+.|..|+++|||+...-..-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 3467999999999986210 0112335678888887 889999999999998854444
Q ss_pred hhcC
Q 003682 587 FSSC 590 (803)
Q Consensus 587 ~~~l 590 (803)
...+
T Consensus 149 ~~nL 152 (229)
T PF03767_consen 149 EKNL 152 (229)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 271
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=92.90 E-value=0.53 Score=58.57 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=33.9
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 689 IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 689 ~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.+-.+..-.-|+..++.+.+.. ...++||||+.||..|++.|+.+
T Consensus 772 ViCCR~sPlQKA~Vv~lVk~~~------~~~TLAIGDGANDVsMIQ~AhVG 816 (1151)
T KOG0206|consen 772 VICCRVSPLQKALVVKLVKKGL------KAVTLAIGDGANDVSMIQEAHVG 816 (1151)
T ss_pred EEEccCCHHHHHHHHHHHHhcC------CceEEEeeCCCccchheeeCCcC
Confidence 3444444456999999885433 56799999999999999988753
No 272
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=92.83 E-value=0.17 Score=50.41 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhhhCCCC-cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCC--CCccceeEeCCHhHHHHH
Q 003682 700 GLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYYLDDTAEILRM 776 (803)
Q Consensus 700 g~al~~ll~~l~~~gi~-~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~--~~s~A~~~v~~~~ev~~~ 776 (803)
..|.+..++.. |+. +.++++|-||.+.+.-.+.+|. -+|-+|. ....+.|.+.+..+..+.
T Consensus 163 ~~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl-------------~tvlv~~~~~~~~~d~~l~~ih~~k~a 226 (244)
T KOG3109|consen 163 EEAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGL-------------KTVLVGREHKIKGVDYALEQIHNNKEA 226 (244)
T ss_pred HHHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccc-------------eeEEEEeeecccchHHHHHHhhchhhh
Confidence 45788888887 998 9999999999999999999997 2555664 345677777666666666
Q ss_pred HHHHHHhhc
Q 003682 777 LLGLAEASA 785 (803)
Q Consensus 777 L~~l~~~~~ 785 (803)
+-.|.+...
T Consensus 227 ~p~l~~~~~ 235 (244)
T KOG3109|consen 227 LPELWEILE 235 (244)
T ss_pred chHHhhccc
Confidence 666666543
No 273
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=92.70 E-value=0.37 Score=54.55 Aligned_cols=101 Identities=18% Similarity=0.239 Sum_probs=59.1
Q ss_pred CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
.+..++.+..++ .|=-+..++.+.++|+.-|+.+ |++...+.. . ++.+.+.+.+ .| ..-.-
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~~----~----~~~l~~~~~~----~G-v~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPAS----G----EARLRRRFAA----HG-VDPDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETSTT----H----HHHHHHHHHH----TT-S-GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCHH----H----HHHHHHHHHH----cC-CChhh
Confidence 456666666665 4667889999999999999866 666554431 1 1223333332 22 22223
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeee
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 394 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~ 394 (803)
++ |.+..+.++..+.|+.+||++-|..+-|- .+.+||+.+
T Consensus 344 i~-f~~~~~~~ehl~~~~~~DI~LDT~p~nG~-TTt~dALwm 383 (468)
T PF13844_consen 344 II-FSPVAPREEHLRRYQLADICLDTFPYNGG-TTTLDALWM 383 (468)
T ss_dssp EE-EEE---HHHHHHHGGG-SEEE--SSS--S-HHHHHHHHH
T ss_pred EE-EcCCCCHHHHHHHhhhCCEEeeCCCCCCc-HHHHHHHHc
Confidence 44 55567889999999999999999887774 477899998
No 274
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=92.60 E-value=1.6 Score=43.21 Aligned_cols=61 Identities=25% Similarity=0.377 Sum_probs=46.2
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcE
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 595 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~l 595 (803)
+.++-+.+|+-|||.. ++. ..+...++|++| ++.+..|=++|.-+.++-+...+++.++++
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4578899999999988 444 557889999999 888999999888777766555555444443
No 275
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=92.45 E-value=5.6 Score=44.55 Aligned_cols=73 Identities=12% Similarity=0.118 Sum_probs=48.5
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccc----cccC
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC----SPSL 429 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~----~~~l 429 (803)
+.+.+.++.. +++..||++| ..-|+| +..|+++++ .|+|+.-..+- ++.+
T Consensus 290 v~~~~~~p~~---~ll~~~d~~I---~hgG~~-t~~eal~~G-------------------vP~v~~P~~~dQ~~~a~~~ 343 (401)
T cd03784 290 VRVVDFVPHD---WLLPRCAAVV---HHGGAG-TTAAALRAG-------------------VPQLVVPFFGDQPFWAARV 343 (401)
T ss_pred eEEeCCCCHH---HHhhhhheee---ecCCch-hHHHHHHcC-------------------CCEEeeCCCCCcHHHHHHH
Confidence 4556667754 4578899998 356765 668999984 44555544441 2222
Q ss_pred ---CCCceeCCC--CHHHHHHHHHHHhC
Q 003682 430 ---SGAIRVNPW--NIDAVAEAMDSALG 452 (803)
Q Consensus 430 ---~~~~lvnP~--d~~~~a~ai~~aL~ 452 (803)
+.|+.+++. +.+++++++.++|+
T Consensus 344 ~~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 344 AELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HHCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 236666554 68999999999998
No 276
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=92.43 E-value=11 Score=41.54 Aligned_cols=91 Identities=12% Similarity=0.068 Sum_probs=55.2
Q ss_pred HHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccc--ccC---------C
Q 003682 362 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS--PSL---------S 430 (803)
Q Consensus 362 ~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~--~~l---------~ 430 (803)
.+++.++|++||+++.=| | ++++-|..+++. |.|+=-+...+ ++. .
T Consensus 243 ~~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~-------------------P~IliP~p~~~~~~Q~~NA~~l~~~g 299 (357)
T COG0707 243 IDDMAALLAAADLVISRA---G-ALTIAELLALGV-------------------PAILVPYPPGADGHQEYNAKFLEKAG 299 (357)
T ss_pred HhhHHHHHHhccEEEeCC---c-ccHHHHHHHhCC-------------------CEEEeCCCCCccchHHHHHHHHHhCC
Confidence 346999999999988533 3 467889999954 34444444331 221 2
Q ss_pred CCceeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 431 GAIRVNPWN--IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 431 ~~~lvnP~d--~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
.|+.+.-.+ .+.+++.|.+++.. ++....+.+..+..-..+...+
T Consensus 300 aa~~i~~~~lt~~~l~~~i~~l~~~-~~~l~~m~~~a~~~~~p~aa~~ 346 (357)
T COG0707 300 AALVIRQSELTPEKLAELILRLLSN-PEKLKAMAENAKKLGKPDAAER 346 (357)
T ss_pred CEEEeccccCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHHH
Confidence 366666555 78999999999974 3333333333343333343333
No 277
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=92.36 E-value=12 Score=41.20 Aligned_cols=261 Identities=15% Similarity=0.078 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHh--cC
Q 003682 119 QAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NA 196 (803)
Q Consensus 119 ~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll--~~ 196 (803)
+..-..=..|++.+.+ .+| |+|.||.=-...+..-+....-++||+..--= -=+.+. .-|.-+|..|-+. -+
T Consensus 50 ~~~~~~~~~~~~~~~~-~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~HieaG-lRs~d~--~~g~~de~~R~~i~~la 123 (346)
T PF02350_consen 50 KSTGLAIIELADVLER-EKP--DAVLVLGDRNEALAAALAAFYLNIPVAHIEAG-LRSGDR--TEGMPDEINRHAIDKLA 123 (346)
T ss_dssp HHHHHHHHHHHHHHHH-HT---SEEEEETTSHHHHHHHHHHHHTT-EEEEES------S-T--TSSTTHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHh-cCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEecCC-CCcccc--CCCCchhhhhhhhhhhh
Confidence 3444444555555544 478 99999988877777666666667776543210 000011 1123344443321 14
Q ss_pred CEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCE
Q 003682 197 DLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQI 276 (803)
Q Consensus 197 dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~ 276 (803)
|+-.--+..+.++.++ .|.+. .+ + ..+-.+++|.-........+... ...+.....++.
T Consensus 124 ~lhf~~t~~~~~~L~~-----~G~~~--~r----I--------~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~ 182 (346)
T PF02350_consen 124 HLHFAPTEEARERLLQ-----EGEPP--ER----I--------FVVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPY 182 (346)
T ss_dssp SEEEESSHHHHHHHHH-----TT--G--GG----E--------EE---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEE
T ss_pred hhhccCCHHHHHHHHh-----cCCCC--Ce----E--------EEEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCE
Confidence 5555556766666664 24321 11 1 11234567755333221111110 112222234555
Q ss_pred EEEeecCcccc---cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 277 VMLGVDDMDIF---KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 277 iil~V~Rld~~---Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
+++..=|.... ........+++.+.+. +++ .+|....++ + .....+.+...++ ..+
T Consensus 183 iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~----~vi~~~hn~----p---~~~~~i~~~l~~~---------~~v 241 (346)
T PF02350_consen 183 ILVTLHPVTNEDNPERLEQILEALKALAER-QNV----PVIFPLHNN----P---RGSDIIIEKLKKY---------DNV 241 (346)
T ss_dssp EEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTE----EEEEE--S-----H---HHHHHHHHHHTT----------TTE
T ss_pred EEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCC----cEEEEecCC----c---hHHHHHHHHhccc---------CCE
Confidence 56666555543 3456777788887776 443 355444322 1 2223332222221 124
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC---C
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---S 430 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l---~ 430 (803)
+ +..+++..++..+++.|++.|-.|- | +..||.++ +.|+|.=...|-.++. .
T Consensus 242 ~-~~~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~l-------------------g~P~v~iR~~geRqe~r~~~ 296 (346)
T PF02350_consen 242 R-LIEPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSL-------------------GKPVVNIRDSGERQEGRERG 296 (346)
T ss_dssp E-EE----HHHHHHHHHHESEEEESSH--H---HHHHGGGG-------------------T--EEECSSS-S-HHHHHTT
T ss_pred E-EECCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHh-------------------CCeEEEecCCCCCHHHHhhc
Confidence 4 4447899999999999999887763 2 23398888 3446655555555544 3
Q ss_pred CCceeCCCCHHHHHHHHHHHhCC
Q 003682 431 GAIRVNPWNIDAVAEAMDSALGV 453 (803)
Q Consensus 431 ~~~lvnP~d~~~~a~ai~~aL~~ 453 (803)
.+++|. .|.+++.++|.+++..
T Consensus 297 ~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 297 SNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp SEEEET-SSHHHHHHHHHHHHH-
T ss_pred ceEEeC-CCHHHHHHHHHHHHhC
Confidence 456664 7999999999999974
No 278
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.26 E-value=0.23 Score=54.13 Aligned_cols=49 Identities=24% Similarity=0.295 Sum_probs=37.6
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCC----CCeEEEEc---CCChhhHHHHh
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDP----KNVVFLVS---GKDRDTLAEWF 587 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~----g~~v~IaT---GR~~~~l~~~~ 587 (803)
.|+||+||||.. ...+-+...++|+.| ... |..+.++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 589999999998 344588999999999 776 88888876 55566644443
No 279
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=92.18 E-value=0.38 Score=48.99 Aligned_cols=23 Identities=9% Similarity=0.174 Sum_probs=19.9
Q ss_pred cccEEEEeCChhhHHHHHHcchh
Q 003682 717 PDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 717 ~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.+.+.+.|||.||.+||+.|++.
T Consensus 175 ~~~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 175 LKLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred hhheEEecCCcccHHHHHhCCCc
Confidence 34568999999999999999974
No 280
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=92.04 E-value=1.4 Score=47.44 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=89.9
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
++..|+-=-.-|++-++...|+++.+.+. . ++.++.-- +.+..++++.++|.+...++ ||. ..+
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~--~----~~kIivPL----sYg~~n~~Yi~~V~~~~~~l---F~~---~~~ 247 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFG--D----DVKIIVPL----SYGANNQAYIQQVIQAGKEL---FGA---ENF 247 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcC--C----CeEEEEEC----CCCCchHHHHHHHHHHHHHh---cCc---cce
Confidence 34445444567888889888887765432 1 22233211 23333566777777766554 332 235
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccc-cCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-CC
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVR-DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SG 431 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~-EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~ 431 (803)
..+++.++.+|+.++++.+|+.++...| .|+|..++ .+.+ |.++++|+-.-....+ +.
T Consensus 248 ~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-------------------G~~v~L~~~np~~~~l~~~ 307 (360)
T PF07429_consen 248 QILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-------------------GKKVFLSRDNPFWQDLKEQ 307 (360)
T ss_pred eEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-------------------CCeEEEecCChHHHHHHhC
Confidence 6788899999999999999999999975 89997643 2332 6789999988777777 34
Q ss_pred Ccee----CCCCHHHHHHHHHHH
Q 003682 432 AIRV----NPWNIDAVAEAMDSA 450 (803)
Q Consensus 432 ~~lv----nP~d~~~~a~ai~~a 450 (803)
++.| +.-|...+++|=+++
T Consensus 308 ~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 308 GIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred CCeEEeccccCCHHHHHHHHHHH
Confidence 5443 334445555444433
No 281
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=91.70 E-value=0.19 Score=50.65 Aligned_cols=34 Identities=24% Similarity=0.200 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 555 AEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 555 ~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+.|+.| ++. +.++|+|+.....++.++..+
T Consensus 71 pg~~e~L~~L-~~~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWL-RER-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHH-Hhc-CCEEEEeCCcHHHHHHHHHHc
Confidence 4456788887 666 899999999999988887654
No 282
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=91.43 E-value=0.22 Score=50.28 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+.+.|++| ++.|+.++|+||.+...+...+..+
T Consensus 76 ~~~g~~~~L~~L-~~~g~~~~i~Sn~~~~~~~~~l~~~ 112 (205)
T TIGR01454 76 VFPGVPELLAEL-RADGVGTAIATGKSGPRARSLLEAL 112 (205)
T ss_pred cCCCHHHHHHHH-HHCCCeEEEEeCCchHHHHHHHHHc
Confidence 345667788887 7778999999998888887777543
No 283
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=90.94 E-value=0.54 Score=47.92 Aligned_cols=37 Identities=5% Similarity=-0.009 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+.+.|+.+ ++.|+.++|+||.....++.++..+
T Consensus 71 l~pg~~e~l~~l-~~~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 71 IREGFREFVAFI-NEHGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred ccccHHHHHHHH-HHCCCeEEEECCCcHHHHHHHHHhh
Confidence 345566778887 7889999999999998888888654
No 284
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=90.77 E-value=0.49 Score=47.55 Aligned_cols=36 Identities=14% Similarity=0.029 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 554 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 554 s~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.+.+.|+.+ ++.|..++|+||.+...++.+.+.+
T Consensus 89 ~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~~l 124 (202)
T TIGR01490 89 YPEARDLIRWH-KAEGHTIVLVSASLTILVKPLARIL 124 (202)
T ss_pred cHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHHc
Confidence 45667788887 7889999999999988888887654
No 285
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=90.41 E-value=2.5 Score=41.25 Aligned_cols=49 Identities=12% Similarity=0.145 Sum_probs=34.0
Q ss_pred ECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 685 SGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 685 ~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
..-.++||.|. +|-.-++.|.+.. |++++++++|=|.....+--+..|.
T Consensus 97 ~~F~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lGV 145 (169)
T PF12689_consen 97 EYFDYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLGV 145 (169)
T ss_dssp CCECEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT-
T ss_pred hhcchhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecCc
Confidence 33456899885 9999999999998 9999999999997665555555554
No 286
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=90.14 E-value=0.99 Score=47.08 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=45.0
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
...+|+||+|.||++.........+.+.+.|.+| ++.|..+++=|--+.+-+..-+..
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHH
Confidence 4579999999999984322334678999999999 889988888777777766666644
No 287
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=90.04 E-value=0.59 Score=48.16 Aligned_cols=47 Identities=28% Similarity=0.364 Sum_probs=38.1
Q ss_pred EEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 692 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 692 I~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
..|.+.-||..++.+++.....|.+.+.|+++|||.||.......+.
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~ 190 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRP 190 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCC
Confidence 44677889999999998754447889999999999999987766544
No 288
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=89.59 E-value=0.37 Score=47.37 Aligned_cols=38 Identities=16% Similarity=0.037 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
|.-.+..+++++ ++++...+++||...|+.....+|..
T Consensus 107 ~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 107 KPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCCC
Confidence 556777888888 89999999999999999999999873
No 289
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=89.30 E-value=0.68 Score=47.18 Aligned_cols=66 Identities=18% Similarity=0.114 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCCh-hhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----CccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~-NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~~v~~~~ev 773 (803)
+....+.+++++. |++++++++|||+. +|+...+.+|.. .+.+..|.. ...+.+.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 5566777777642 68899999999997 899999999973 245555432 23567888888888
Q ss_pred HHHH
Q 003682 774 LRML 777 (803)
Q Consensus 774 ~~~L 777 (803)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
No 290
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=89.08 E-value=0.28 Score=47.41 Aligned_cols=56 Identities=18% Similarity=0.281 Sum_probs=38.2
Q ss_pred eEEEEecCCcCCCCCCCCC----------------CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 533 RAILLDYDGTIMVPGSIST----------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 533 kli~~DlDGTLl~~~~~~~----------------~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
|++++|+||||+....... ..-|.+.+.|+.+++ ...++|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 6899999999997431111 024677777887733 5899999999999888888766
No 291
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=88.61 E-value=1.2 Score=53.61 Aligned_cols=47 Identities=13% Similarity=0.143 Sum_probs=34.0
Q ss_pred CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCc
Q 003682 550 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 600 (803)
Q Consensus 550 ~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nG 600 (803)
.+++-+.+..+|++| .+.++..+.|||-+.-..-...+ +-|++.+.+
T Consensus 703 eNkLK~~T~~VI~eL-~~AnIRtVMcTGDNllTaisVak---eCgmi~p~~ 749 (1140)
T KOG0208|consen 703 ENKLKEETKRVIDEL-NRANIRTVMCTGDNLLTAISVAK---ECGMIEPQV 749 (1140)
T ss_pred ecccccccHHHHHHH-HhhcceEEEEcCCchheeeehhh---cccccCCCC
Confidence 345667788888888 77899999999999887666553 445554443
No 292
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=88.21 E-value=4.7 Score=42.95 Aligned_cols=125 Identities=16% Similarity=0.172 Sum_probs=82.0
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE-EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ-IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~-i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
++..|+---.=|++-++.+.|+++.+++.+ ++.++. .+.|+ + .+++.++|.+...+ .||. ..
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-g----n~~Yi~~V~~~~~~---lF~~---~~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-N----NQAYIEEVRQAGLA---LFGA---EN 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-C----CHHHHHHHHHHHHH---hcCc---cc
Confidence 344454445678999999999998776432 233433 23332 2 24566777765554 3442 24
Q ss_pred EEEecCCCCHHHHHHHHHhcccceeccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-C
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S 430 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~ 430 (803)
+..+++.++.+|+.++++.+|+.++.-- .+|+|..++=- .. |.|+++|+-.-.-..+ +
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~-------------------G~~v~l~r~n~fwqdl~e 267 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL-------------------GKPVVLSRDNPFWQDLTE 267 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC-------------------CCcEEEecCCchHHHHHh
Confidence 6778999999999999999999998875 58999775421 11 5678888666655555 4
Q ss_pred CCcee
Q 003682 431 GAIRV 435 (803)
Q Consensus 431 ~~~lv 435 (803)
.++-|
T Consensus 268 ~gv~V 272 (322)
T PRK02797 268 QGLPV 272 (322)
T ss_pred CCCeE
Confidence 45544
No 293
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=88.09 E-value=0.91 Score=47.11 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCC-hhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~-~NDi~Mf~~ag~ 738 (803)
+......+++++ |++++++++|||+ ..|+...+.+|.
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~ 202 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGM 202 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCC
Confidence 577888888988 9999999999999 699999999997
No 294
>PLN02811 hydrolase
Probab=87.72 E-value=0.73 Score=47.14 Aligned_cols=60 Identities=13% Similarity=0.016 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhhhCC---CCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC----ccceeEeCCHh
Q 003682 699 KGLVAQHQLETMHQKG---MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----SKAKYYLDDTA 771 (803)
Q Consensus 699 Kg~al~~ll~~l~~~g---i~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~----s~A~~~v~~~~ 771 (803)
+.......++++ + ++++++++|||+..|+.+.+.+|. .+++|..|... ..+.+++++..
T Consensus 139 ~p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~-----------~~i~v~~~~~~~~~~~~~d~vi~~~~ 204 (220)
T PLN02811 139 APDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGM-----------SVVMVPDPRLDKSYCKGADQVLSSLL 204 (220)
T ss_pred CcHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCC-----------eEEEEeCCCCcHhhhhchhhHhcCHh
Confidence 556788888888 6 889999999999999999999997 34666655321 23445555554
Q ss_pred H
Q 003682 772 E 772 (803)
Q Consensus 772 e 772 (803)
+
T Consensus 205 e 205 (220)
T PLN02811 205 D 205 (220)
T ss_pred h
Confidence 4
No 295
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=87.60 E-value=1 Score=43.74 Aligned_cols=57 Identities=9% Similarity=0.105 Sum_probs=36.9
Q ss_pred CeEEEEecCCcCCCCCCCCCC---------------------CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 532 NRAILLDYDGTIMVPGSISTS---------------------PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~---------------------is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
++.+++|+|+||+........ .-|.+.+.|++| .+. ..++|.|.-+...++.++..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l-~~~-yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERV-SKW-YELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHH-Hhc-CEEEEEcCCcHHHHHHHHHHH
Confidence 368999999999974311110 125566777776 433 777777777777776666543
No 296
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=87.27 E-value=1.1 Score=44.76 Aligned_cols=58 Identities=12% Similarity=0.059 Sum_probs=42.4
Q ss_pred cCCeEEEEecCCcCCCCCCCCC----CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 530 TKNRAILLDYDGTIMVPGSIST----SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~----~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
..+|++++|||+||++..+... ..-|.+.+.|+.+.+ ...|+|=|..+...+...+..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHH
Confidence 4568999999999998432121 123677888888743 788999999888888777754
No 297
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=86.97 E-value=1.8 Score=48.21 Aligned_cols=71 Identities=17% Similarity=0.205 Sum_probs=55.1
Q ss_pred HHHHHHHHHhcCCeEEEEecCCcCCCCC-------------CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHH
Q 003682 520 IDHIVSAYKRTKNRAILLDYDGTIMVPG-------------SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 586 (803)
Q Consensus 520 ~~~~~~~y~~~~~kli~~DlDGTLl~~~-------------~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~ 586 (803)
...+..+......|.+++|+|+||.... ...+..-....+.+..| .++|+.++|||=-....+++.
T Consensus 210 i~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~ev 288 (574)
T COG3882 210 IASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKEV 288 (574)
T ss_pred HHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHHH
Confidence 4556666666778999999999998621 01223446778888898 999999999999999999999
Q ss_pred hhcCC
Q 003682 587 FSSCE 591 (803)
Q Consensus 587 ~~~l~ 591 (803)
+...|
T Consensus 289 F~khp 293 (574)
T COG3882 289 FRKHP 293 (574)
T ss_pred HhhCC
Confidence 97644
No 298
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=86.49 E-value=1.1 Score=43.40 Aligned_cols=42 Identities=21% Similarity=0.178 Sum_probs=34.2
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcC
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a 741 (803)
-+-|.+|+..++.+.+. ++.++++|||..|++..+.....+|
T Consensus 142 s~fG~dK~~vI~~l~e~-------~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 142 SQFGHDKSSVIHELSEP-------NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cccCCCcchhHHHhhcC-------CceEEEecCCcccccHhhhhhhHhh
Confidence 35588899999888653 5669999999999999988887655
No 299
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=86.31 E-value=0.4 Score=49.78 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=20.0
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHH
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 564 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L 564 (803)
++|.|+||+||||++ ....+.....++++.+
T Consensus 9 ~~k~iiFDlDGTL~D---~~~~~~~a~~~~~~~~ 39 (238)
T PRK10748 9 RISALTFDLDDTLYD---NRPVILRTEQEALAFV 39 (238)
T ss_pred CceeEEEcCcccccC---ChHHHHHHHHHHHHHH
Confidence 468999999999999 3333333333444333
No 300
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=86.08 E-value=3.7 Score=45.97 Aligned_cols=75 Identities=15% Similarity=0.094 Sum_probs=48.5
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccc----ccC
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS----PSL 429 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~----~~l 429 (803)
+.+.+.+++. .++..||++|.. -|.| +..|+++++ .|+|+.-..+-. ..+
T Consensus 277 v~~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G-------------------~P~v~~p~~~dq~~~a~~l 330 (392)
T TIGR01426 277 VEVRQWVPQL---EILKKADAFITH---GGMN-STMEALFNG-------------------VPMVAVPQGADQPMTARRI 330 (392)
T ss_pred eEEeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhC-------------------CCEEecCCcccHHHHHHHH
Confidence 3455677764 567899988864 4665 668999984 455654333321 112
Q ss_pred ---CCCceeCC--CCHHHHHHHHHHHhCCC
Q 003682 430 ---SGAIRVNP--WNIDAVAEAMDSALGVS 454 (803)
Q Consensus 430 ---~~~~lvnP--~d~~~~a~ai~~aL~~~ 454 (803)
..|..++. .+.++++++|.++|..+
T Consensus 331 ~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~ 360 (392)
T TIGR01426 331 AELGLGRHLPPEEVTAEKLREAVLAVLSDP 360 (392)
T ss_pred HHCCCEEEeccccCCHHHHHHHHHHHhcCH
Confidence 22555553 46789999999999854
No 301
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=85.83 E-value=0.69 Score=48.85 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=31.9
Q ss_pred CCCHHHHHH-HHHHHhhhCC--CCcccEEEEeCChhhHHHHHHcc
Q 003682 696 GVNKGLVAQ-HQLETMHQKG--MLPDFVLCIGDDRSDEDMFEVIK 737 (803)
Q Consensus 696 gv~Kg~al~-~ll~~l~~~g--i~~d~vla~GD~~NDi~Mf~~ag 737 (803)
..+|...+. ..++++ + .++++|+++|||.||+.|...+.
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~~ 231 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGVA 231 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCCC
Confidence 467887666 577777 6 78999999999999999977763
No 302
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=85.55 E-value=3.1 Score=41.70 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
-|+..++.+++.- +++.. ++|+|||.+|.+||+.+..
T Consensus 191 ~ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rg 227 (315)
T COG4030 191 EKAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARG 227 (315)
T ss_pred chhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhc
Confidence 3677777777764 55444 8999999999999999865
No 303
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=84.53 E-value=1.6 Score=41.94 Aligned_cols=37 Identities=24% Similarity=0.353 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+..+.+.+++.+ |++++++++|||+..|+.+.+.+|.
T Consensus 135 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~ 171 (176)
T PF13419_consen 135 DPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGI 171 (176)
T ss_dssp SHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCC
Confidence 468899999999 9999999999999999999999997
No 304
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=84.04 E-value=0.79 Score=43.19 Aligned_cols=71 Identities=20% Similarity=0.187 Sum_probs=39.1
Q ss_pred hcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHH-----HHHhcCCEEeccCHhhHHH
Q 003682 135 VISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-----RALLNADLIGFHTFDYARH 209 (803)
Q Consensus 135 ~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il-----~~ll~~dligf~~~~~~~~ 209 (803)
..+| |+|++|+++..+++.++++. .++|+.+.+|..+.... .++...++ ..+-.+|.+-..+....+.
T Consensus 71 ~~~~--Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 143 (160)
T PF13579_consen 71 RERP--DVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRY 143 (160)
T ss_dssp T-----SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHH
T ss_pred ccCC--eEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 3345 99999999877777777733 37999999997543221 11111121 3445688888888776666
Q ss_pred HHH
Q 003682 210 FLS 212 (803)
Q Consensus 210 Fl~ 212 (803)
+.+
T Consensus 144 l~~ 146 (160)
T PF13579_consen 144 LRR 146 (160)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 305
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=83.56 E-value=1.1 Score=41.54 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhhCC-CCcccEEEEeC-ChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKG-MLPDFVLCIGD-DRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~g-i~~d~vla~GD-~~NDi~Mf~~ag~ 738 (803)
|...++++++.+ + ++++++++||| +.+|+.+.+.+|.
T Consensus 87 ~~~~~~~~~~~~---~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 87 KPGMFLEALKRF---NEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred ChHHHHHHHHHc---CCCChhheEEEcCCCcccHHHHHHCCC
Confidence 678999999988 7 99999999999 7999999999987
No 306
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=83.47 E-value=0.85 Score=45.56 Aligned_cols=28 Identities=25% Similarity=0.483 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChh
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRD 581 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~ 581 (803)
+-+.+.++|++| .+.|..++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 456788999999 7788888888888764
No 307
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=83.08 E-value=3.9 Score=43.57 Aligned_cols=92 Identities=9% Similarity=0.005 Sum_probs=56.5
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
.+++++..|-.|+.+.....++|+..+ .++++ + .+++| +.. +.+++++ +.+.. + + .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~--i-~vv~G-~~~---~~~~~l~----~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS--I-TLVTG-SSN---PNLDELK----KFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce--E-EEEEC-CCC---cCHHHHH----HHHHh-C---C-----CE
Confidence 367999999999988667778777653 22222 2 23344 221 2233333 33222 1 1 13
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
. +.++ .+++..+|+.||+++.+ -|.+..|+++++.
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 3 3333 56899999999998874 4578999999954
No 308
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=83.04 E-value=0.7 Score=47.10 Aligned_cols=14 Identities=36% Similarity=0.634 Sum_probs=13.1
Q ss_pred CeEEEEecCCcCCC
Q 003682 532 NRAILLDYDGTIMV 545 (803)
Q Consensus 532 ~kli~~DlDGTLl~ 545 (803)
+|+|+||+||||++
T Consensus 1 ~k~viFD~DGTL~d 14 (224)
T TIGR02254 1 YKTLLFDLDDTILD 14 (224)
T ss_pred CCEEEEcCcCcccc
Confidence 57999999999999
No 309
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=82.46 E-value=1.5 Score=44.62 Aligned_cols=15 Identities=40% Similarity=0.685 Sum_probs=13.6
Q ss_pred CCeEEEEecCCcCCC
Q 003682 531 KNRAILLDYDGTIMV 545 (803)
Q Consensus 531 ~~kli~~DlDGTLl~ 545 (803)
.+|+.+||+||||++
T Consensus 4 ~~~la~FDfDgTLt~ 18 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQ 18 (210)
T ss_pred cCcEEEEcCCCCCcc
Confidence 468999999999998
No 310
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=82.38 E-value=2.7 Score=40.60 Aligned_cols=59 Identities=12% Similarity=0.017 Sum_probs=44.0
Q ss_pred cCCeEEEEecCCcCCCCCCCC-----C---------------------------CCCHHHHHHHHHHhcCCCCeEEEEcC
Q 003682 530 TKNRAILLDYDGTIMVPGSIS-----T---------------------------SPNAEAVAILDNLCRDPKNVVFLVSG 577 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~-----~---------------------------~is~~~~~aL~~L~~~~g~~v~IaTG 577 (803)
.++..+++|||.||+...... . .+-|.+.+.|+++ + ++..++|+|.
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l-~-~~yel~I~T~ 81 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEA-S-KLYEMHVYTM 81 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHH-H-hhcEEEEEeC
Confidence 457889999999999743110 0 0135778899998 4 3599999999
Q ss_pred CChhhHHHHhhcC
Q 003682 578 KDRDTLAEWFSSC 590 (803)
Q Consensus 578 R~~~~l~~~~~~l 590 (803)
.+...+...+..+
T Consensus 82 ~~~~yA~~vl~~l 94 (156)
T TIGR02250 82 GTRAYAQAIAKLI 94 (156)
T ss_pred CcHHHHHHHHHHh
Confidence 9999888888655
No 311
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=82.20 E-value=1.1 Score=44.24 Aligned_cols=37 Identities=11% Similarity=0.157 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+++++++ |++++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 567889999999 9999999999999999999999986
No 312
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=81.97 E-value=3 Score=50.12 Aligned_cols=67 Identities=19% Similarity=0.272 Sum_probs=47.2
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----Cccce
Q 003682 689 IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAK 764 (803)
Q Consensus 689 ~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~ 764 (803)
+-|+.|. +|...++.+.++ | ..|+++||+.||-+.+..+.. ++++|.. ...|+
T Consensus 580 ~AellPe--dK~~~V~~l~~~----g---~~VamVGDGINDAPALA~AdV--------------GiAmG~GtDvA~eaAD 636 (713)
T COG2217 580 RAELLPE--DKAEIVRELQAE----G---RKVAMVGDGINDAPALAAADV--------------GIAMGSGTDVAIEAAD 636 (713)
T ss_pred eccCCcH--HHHHHHHHHHhc----C---CEEEEEeCCchhHHHHhhcCe--------------eEeecCCcHHHHHhCC
Confidence 3455663 588888887653 3 569999999999999999975 5666652 35577
Q ss_pred eEe--CCHhHHHHHHH
Q 003682 765 YYL--DDTAEILRMLL 778 (803)
Q Consensus 765 ~~v--~~~~ev~~~L~ 778 (803)
..+ ++...+.+.++
T Consensus 637 vvL~~~dL~~v~~ai~ 652 (713)
T COG2217 637 VVLMRDDLSAVPEAID 652 (713)
T ss_pred EEEecCCHHHHHHHHH
Confidence 765 56666665554
No 313
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=81.66 E-value=3 Score=40.26 Aligned_cols=68 Identities=16% Similarity=0.268 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHhcCCeEEEEecCCcCCCCCC------------------------------CCCCCCHHHHHHHHHHhcC
Q 003682 518 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGS------------------------------ISTSPNAEAVAILDNLCRD 567 (803)
Q Consensus 518 l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~------------------------------~~~~is~~~~~aL~~L~~~ 567 (803)
.++.++..+....+.-.+-||+|.|++-.++ ..-.++.+...-|-.+-+.
T Consensus 49 iSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~ 128 (237)
T COG3700 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHh
Confidence 4567777777666666788899999995331 1123566666666666678
Q ss_pred CCCeEEEEcCCChhhHHH
Q 003682 568 PKNVVFLVSGKDRDTLAE 585 (803)
Q Consensus 568 ~g~~v~IaTGR~~~~l~~ 585 (803)
+|-.++++|||+...++.
T Consensus 129 RGD~i~FvTGRt~gk~d~ 146 (237)
T COG3700 129 RGDAIYFVTGRTPGKTDT 146 (237)
T ss_pred cCCeEEEEecCCCCcccc
Confidence 899999999998775443
No 314
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=80.54 E-value=2.2 Score=49.12 Aligned_cols=77 Identities=13% Similarity=0.239 Sum_probs=50.1
Q ss_pred CCeEEEEecCCcCCCCCC-------CCCCC-CHHHHHHHHHHhcCCCCeEEEEcCCChhh---HHHHhhcCCCCcEEecC
Q 003682 531 KNRAILLDYDGTIMVPGS-------ISTSP-NAEAVAILDNLCRDPKNVVFLVSGKDRDT---LAEWFSSCEGLGIAAEH 599 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~-------~~~~i-s~~~~~aL~~L~~~~g~~v~IaTGR~~~~---l~~~~~~l~~l~lia~n 599 (803)
.-|+|+.|+|||++...- ..+.- ...+.+...+. +++|++++.+|.|+... .+.++..+.+.|-.--.
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~I-k~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPd 607 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKI-KENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPD 607 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHH-HhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCC
Confidence 468999999999997210 01111 24455666665 78899999999999764 34555544445555556
Q ss_pred cEEEEeCCc
Q 003682 600 GYFVRPNYG 608 (803)
Q Consensus 600 Ga~i~~~~~ 608 (803)
|-+|..+++
T Consensus 608 GPViLSPd~ 616 (738)
T KOG2116|consen 608 GPVILSPDS 616 (738)
T ss_pred CCEEeCCCc
Confidence 666665543
No 315
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=80.48 E-value=2.2 Score=42.66 Aligned_cols=37 Identities=27% Similarity=0.227 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+.+++++ |++++++++|||+.+|+...+.+|.
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~ 186 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGF 186 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCC
Confidence 467889999999 9999999999999999999999997
No 316
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=79.81 E-value=3.4 Score=41.36 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+.+++++ |++++++++|||+..|+...+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~ 179 (199)
T PRK09456 143 EARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGI 179 (199)
T ss_pred CHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCC
Confidence 566778888988 9999999999999999999999987
No 317
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=79.79 E-value=2.3 Score=42.72 Aligned_cols=13 Identities=15% Similarity=0.235 Sum_probs=11.9
Q ss_pred eEEEEecCCcCCC
Q 003682 533 RAILLDYDGTIMV 545 (803)
Q Consensus 533 kli~~DlDGTLl~ 545 (803)
.+|+||+||||++
T Consensus 1 ~~viFDldgvL~d 13 (199)
T PRK09456 1 MLYIFDLGNVIVD 13 (199)
T ss_pred CEEEEeCCCcccc
Confidence 4799999999998
No 318
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=78.95 E-value=2.4 Score=41.47 Aligned_cols=37 Identities=14% Similarity=0.189 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+.+++.+ |++++++++|||+..|+.+.+.+|.
T Consensus 142 ~~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 142 DPDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CHHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCC
Confidence 367888999998 9999999999999999999999987
No 319
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=78.41 E-value=4.6 Score=41.65 Aligned_cols=14 Identities=29% Similarity=0.570 Sum_probs=12.4
Q ss_pred EEEEecCCcCCCCC
Q 003682 534 AILLDYDGTIMVPG 547 (803)
Q Consensus 534 li~~DlDGTLl~~~ 547 (803)
|++||+|+||++.+
T Consensus 2 LvvfDFD~TIvd~d 15 (234)
T PF06888_consen 2 LVVFDFDHTIVDQD 15 (234)
T ss_pred EEEEeCCCCccCCc
Confidence 79999999999854
No 320
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=78.40 E-value=1.7 Score=43.37 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=12.9
Q ss_pred CeEEEEecCCcCCC
Q 003682 532 NRAILLDYDGTIMV 545 (803)
Q Consensus 532 ~kli~~DlDGTLl~ 545 (803)
+|+|+||+||||++
T Consensus 1 ik~viFD~dgTLiD 14 (198)
T TIGR01428 1 IKALVFDVYGTLFD 14 (198)
T ss_pred CcEEEEeCCCcCcc
Confidence 47899999999999
No 321
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=76.58 E-value=5.9 Score=40.56 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
+......+++++ |+++++++++||+..|+...+.+|..
T Consensus 154 ~p~~y~~i~~~l---gv~p~e~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 154 EAQSYVKIAGQL---GSPPREILFLSDIINELDAARKAGLH 191 (220)
T ss_pred CHHHHHHHHHHh---CcChhHEEEEeCCHHHHHHHHHcCCE
Confidence 667889999999 99999999999999999999999973
No 322
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=76.45 E-value=30 Score=41.71 Aligned_cols=38 Identities=16% Similarity=0.308 Sum_probs=33.8
Q ss_pred CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 552 SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 552 ~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.|-++++++++.+ .+.|+.|..+||-+....+.+.+++
T Consensus 584 PPR~ev~~ai~~c-~~aGIrV~mITGD~~~TA~AI~r~i 621 (972)
T KOG0202|consen 584 PPRPEVADAIELC-RQAGIRVIMITGDNKETAEAIAREI 621 (972)
T ss_pred CCchhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHHh
Confidence 4678999999995 9999999999999999999988643
No 323
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=75.03 E-value=1.7 Score=47.60 Aligned_cols=67 Identities=15% Similarity=0.195 Sum_probs=40.4
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCC-----------CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEe
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTS-----------PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAA 597 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~-----------is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia 597 (803)
+...+++++|+|||++. ++.. -+..+.....+. ..+|..|.-.|.|+...+..-.. -+..++
T Consensus 372 r~n~kiVVsDiDGTITk---SD~~Ghv~~miGkdwth~gVAkLYtdI-~rNGYkI~YltsR~~Gqa~sTrs---ylrnie 444 (580)
T COG5083 372 RNNKKIVVSDIDGTITK---SDALGHVKQMIGKDWTHNGVAKLYTDI-DRNGYKIKYLTSRSYGQADSTRS---YLRNIE 444 (580)
T ss_pred eCCCcEEEEecCCcEEe---hhhHHHHHHHhccchhhcchhhhhhhh-ccCceEEEEEecccccchhhhhh---HHHhhh
Confidence 34679999999999998 3321 122333444444 45688888888888765543321 233445
Q ss_pred cCcEE
Q 003682 598 EHGYF 602 (803)
Q Consensus 598 ~nGa~ 602 (803)
.||+.
T Consensus 445 Qngyk 449 (580)
T COG5083 445 QNGYK 449 (580)
T ss_pred hcCcc
Confidence 55544
No 324
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=73.83 E-value=3.9 Score=40.31 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=18.0
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHH
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILD 562 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~ 562 (803)
+|+||+||||++ +...+.....+++.
T Consensus 2 ~viFDlDGTL~d---s~~~~~~~~~~~~~ 27 (184)
T TIGR01993 2 VWFFDLDNTLYP---HSAGIFLQIDRNIT 27 (184)
T ss_pred eEEEeCCCCCCC---CcccHHHHHHHHHH
Confidence 689999999999 44444444444444
No 325
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=73.43 E-value=11 Score=40.82 Aligned_cols=99 Identities=12% Similarity=0.121 Sum_probs=53.8
Q ss_pred CCEEEEeecC----cccccC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 003682 274 GQIVMLGVDD----MDIFKG-ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP 348 (803)
Q Consensus 274 ~~~iil~V~R----ld~~Kg-i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~ 348 (803)
...+.+-||- ...... ...++..+..+.+.++ .. ++ |. +||-..++ ..+.+.++.+.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~----~~-vt-tSRRTp~~---~~~~L~~~~~~-------- 207 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GS----LL-VT-TSRRTPPE---AEAALRELLKD-------- 207 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-Ce----EE-EE-cCCCCcHH---HHHHHHHhhcC--------
Confidence 4555556663 222222 2256677777777765 22 33 22 34433332 22222222111
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeee
Q 003682 349 GYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 349 ~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~ 395 (803)
...+.++. .-+..=+.+++..||.+++|. |..+++. ||++++
T Consensus 208 -~~~~~~~~-~~~~nPy~~~La~ad~i~VT~--DSvSMvs-EA~~tG 249 (311)
T PF06258_consen 208 -NPGVYIWD-GTGENPYLGFLAAADAIVVTE--DSVSMVS-EAAATG 249 (311)
T ss_pred -CCceEEec-CCCCCcHHHHHHhCCEEEEcC--ccHHHHH-HHHHcC
Confidence 11233443 233445889999999999997 7778765 999983
No 326
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=71.85 E-value=1.4 Score=42.97 Aligned_cols=34 Identities=24% Similarity=0.243 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 735 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ 735 (803)
.....+.+++++ |++++++++|||+..|+...+.
T Consensus 141 ~p~~f~~~~~~~---~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 141 DPVVYELVFDTV---GLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CHHHHHHHHHHH---CCCHHHeEeEecChhhHHHHhc
Confidence 456678888998 9999999999999999987654
No 327
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=71.69 E-value=3.4 Score=37.91 Aligned_cols=49 Identities=16% Similarity=0.149 Sum_probs=42.4
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhh
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 588 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~ 588 (803)
..+-++++|+.. .+++-+++.+.|++| .+. +.|+|+||-.+.++.+...
T Consensus 16 ~~~~~v~~tiat----gGklf~ev~e~iqeL-~d~-V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 16 SKAGKVLYTIAT----GGKLFSEVSETIQEL-HDM-VDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred eecceEEEEEcc----CcEEcHhhHHHHHHH-HHh-heEEEecCCcchHHHHHHH
Confidence 346688999987 677889999999999 777 9999999999999998884
No 328
>COG4996 Predicted phosphatase [General function prediction only]
Probab=71.47 E-value=10 Score=34.84 Aligned_cols=57 Identities=21% Similarity=0.131 Sum_probs=40.3
Q ss_pred eEEEEecCCcCCCCCCC------CC---------------CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 533 RAILLDYDGTIMVPGSI------ST---------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 533 kli~~DlDGTLl~~~~~------~~---------------~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
++|+||.||||.++-.. -. .+-+.+++.|+.+ +..|..+..+|=......-+.+..+
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~wa-rnsG~i~~~~sWN~~~kA~~aLral 78 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWA-RNSGYILGLASWNFEDKAIKALRAL 78 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHH-HhCCcEEEEeecCchHHHHHHHHHh
Confidence 47999999999984310 00 1236788888886 8889888888887777666665443
No 329
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=69.78 E-value=3.9 Score=43.26 Aligned_cols=40 Identities=23% Similarity=0.321 Sum_probs=31.7
Q ss_pred eEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCC----CCeEEEEcC
Q 003682 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDP----KNVVFLVSG 577 (803)
Q Consensus 533 kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~----g~~v~IaTG 577 (803)
=-|+||+||.|+- ...+-+...++|+.| .+. .+++++.|-
T Consensus 36 fgfafDIDGVL~R----G~~~i~~~~~Alr~L-~~~~g~lkIP~vfLTN 79 (389)
T KOG1618|consen 36 FGFAFDIDGVLFR----GHRPIPGALKALRRL-VDNQGQLKIPFVFLTN 79 (389)
T ss_pred eeEEEecccEEEe----cCCCCcchHHHHHHH-HhcCCCeeccEEEEeC
Confidence 4799999999997 456678889999999 555 677777763
No 330
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=68.49 E-value=1.9e+02 Score=31.83 Aligned_cols=28 Identities=11% Similarity=0.045 Sum_probs=23.5
Q ss_pred HHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 365 RIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 365 l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
...+|+.||+.+..| |.+.+|++.++.|
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g~P 256 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIGTP 256 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhCCC
Confidence 467899999999998 7788899998554
No 331
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=68.37 E-value=17 Score=43.69 Aligned_cols=38 Identities=21% Similarity=0.319 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEe
Q 003682 556 EAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAA 597 (803)
Q Consensus 556 ~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia 597 (803)
.+=++..+ |+..|++|+.+||+.+-..+.+.. ..+++.
T Consensus 594 ~vP~Av~~-CrsAGIkvimVTgdhpiTAkAiA~---~vgIi~ 631 (1019)
T KOG0203|consen 594 AVPDAVGK-CRSAGIKVIMVTGDHPITAKAIAK---SVGIIS 631 (1019)
T ss_pred cCchhhhh-hhhhCceEEEEecCccchhhhhhh---heeeec
Confidence 33455556 688899999999999999988884 455544
No 332
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=68.08 E-value=31 Score=32.57 Aligned_cols=72 Identities=22% Similarity=0.247 Sum_probs=54.1
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003682 293 KLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA 372 (803)
Q Consensus 293 ~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~A 372 (803)
-+.+...+++++ ++..|.||.|-..++..+. ..+.+++++.++..+|+ .||++....++-.+-.+.+..+
T Consensus 41 ~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~~ 110 (141)
T COG0816 41 DFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIEA 110 (141)
T ss_pred hHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHHc
Confidence 445556666665 3568889999877777766 77789999999999987 4798888888877777766665
Q ss_pred cc
Q 003682 373 EC 374 (803)
Q Consensus 373 dv 374 (803)
++
T Consensus 111 ~~ 112 (141)
T COG0816 111 GV 112 (141)
T ss_pred CC
Confidence 43
No 333
>PRK14986 glycogen phosphorylase; Provisional
Probab=66.96 E-value=1.1e+02 Score=37.39 Aligned_cols=150 Identities=11% Similarity=0.066 Sum_probs=91.0
Q ss_pred CCEEEEeecCcccccCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 003682 274 GQIVMLGVDDMDIFKGISL-KLLAMEQLL--SQNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG 349 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~-~l~A~~~ll--~~~p~~~-~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~ 349 (803)
+...++.+-|+..-|-... +|...+++. .++|+.. ..+++|..|-...++. .-.++-+.|..++..||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY-MAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH-HHHHHHHHHHHHHHHhccChhhcC
Confidence 4567888999998888777 777766653 4566532 2466776665443332 234566778888887886422233
Q ss_pred cccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC
Q 003682 350 YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 429 (803)
Q Consensus 350 ~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l 429 (803)
.-.|+|+.. .+-.--..++.+|||-.-+|+ ..+||--. + +|..++ .|++.+|..-|.-.++
T Consensus 621 ~lkVVFlen-Y~vslAe~lipg~Dv~eqis~------ag~EASGT--s--nMK~al--------NGaLtlgtlDG~nvEi 681 (815)
T PRK14986 621 KLKVVFIPN-YSVSLAQLIIPAADLSEQISL------AGTEASGT--S--NMKFAL--------NGALTIGTLDGANVEM 681 (815)
T ss_pred ceeEEEeCC-CCHHHHHHhhhhhhhhhhCCC------CCccccCc--c--hhhHHh--------cCceeeeccCCchhHH
Confidence 345777764 555556678999999888886 44553211 1 122222 4678888888866555
Q ss_pred -C-----CCceeCCCCHHHHH
Q 003682 430 -S-----GAIRVNPWNIDAVA 444 (803)
Q Consensus 430 -~-----~~~lvnP~d~~~~a 444 (803)
. +++.+-. ..++++
T Consensus 682 ~e~vG~eN~~~fG~-~~~ev~ 701 (815)
T PRK14986 682 LEHVGEENIFIFGN-TAEEVE 701 (815)
T ss_pred HHhcCCCcEEEeCC-CHHHHH
Confidence 1 2566633 455444
No 334
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=66.46 E-value=2.8e+02 Score=32.93 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=24.3
Q ss_pred HHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 365 RIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 365 l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
-..++++||+.+.+| |.+.+|++.++.|
T Consensus 482 ~~~~m~aaD~aLaaS-----GTaTLEaAL~g~P 509 (608)
T PRK01021 482 RYELMRECDCALAKC-----GTIVLETALNQTP 509 (608)
T ss_pred hHHHHHhcCeeeecC-----CHHHHHHHHhCCC
Confidence 368999999999999 7899999998554
No 335
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.06 E-value=14 Score=40.41 Aligned_cols=114 Identities=12% Similarity=0.081 Sum_probs=75.4
Q ss_pred EecCCCCHHHHHHHHHhcccceeccc---ccCC---CCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccccc
Q 003682 355 LIDTPLQFYERIAYYVIAECCLVTAV---RDGM---NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 428 (803)
Q Consensus 355 ~~~~~~~~~~l~aly~~Adv~v~~S~---~EG~---~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~ 428 (803)
++....+.......++.-|+.+.=+. -++. +.-..|+++| +|+++.+--.+.-.-
T Consensus 241 yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc-------------------~~~liT~~~~~~e~~ 301 (373)
T COG4641 241 YIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC-------------------GGFLITDYWKDLEKF 301 (373)
T ss_pred hhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc-------------------CCccccccHHHHHHh
Confidence 33333344677777777777654333 2333 7788999999 677777766665555
Q ss_pred CC-CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHHHHHH
Q 003682 429 LS-GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLERA 488 (803)
Q Consensus 429 l~-~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~~ 488 (803)
+. |--++--.|..++.+.+..++.-+ .+|++..+..++.| ..|+..+-+..++..+...
T Consensus 302 f~pgk~~iv~~d~kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 302 FKPGKDIIVYQDSKDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred cCCchheEEecCHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 53 323333578999999999999844 45555566655554 4588888887787777753
No 336
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=65.09 E-value=10 Score=39.27 Aligned_cols=29 Identities=10% Similarity=0.040 Sum_probs=24.8
Q ss_pred EEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC
Q 003682 720 VLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK 759 (803)
Q Consensus 720 vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~ 759 (803)
++++||+.||+...+.+|. ..++|.+|..
T Consensus 187 ~i~vGDs~~DI~aAk~AGi-----------~~I~V~~g~~ 215 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEAGA-----------RGIRILRASN 215 (237)
T ss_pred eEEEeCCHHHHHHHHHCCC-----------CEEEEEecCC
Confidence 7999999999999999987 3478888853
No 337
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=64.51 E-value=6.8 Score=38.11 Aligned_cols=24 Identities=25% Similarity=0.326 Sum_probs=17.0
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHH
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNL 564 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L 564 (803)
.|+||+||||++. . +....+++.+
T Consensus 1 ~viFD~DGTL~D~---~----~~~~~~~~~~ 24 (175)
T TIGR01493 1 AMVFDVYGTLVDV---H----GGVRACLAAI 24 (175)
T ss_pred CeEEecCCcCccc---H----HHHHHHHHHh
Confidence 3799999999992 2 3455566665
No 338
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=63.93 E-value=26 Score=42.23 Aligned_cols=36 Identities=14% Similarity=0.171 Sum_probs=32.3
Q ss_pred CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhh
Q 003682 552 SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 588 (803)
Q Consensus 552 ~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~ 588 (803)
..-|.+.++++. |+..|++|-.+||-+....+.+..
T Consensus 647 PvRPgV~~AV~~-Cq~AGItVRMVTGDNI~TAkAIA~ 682 (1034)
T KOG0204|consen 647 PVRPGVPEAVQL-CQRAGITVRMVTGDNINTAKAIAR 682 (1034)
T ss_pred CCCCCcHHHHHH-HHHcCcEEEEEeCCcHHHHHHHHH
Confidence 456899999999 799999999999999999999884
No 339
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=63.87 E-value=5.5 Score=43.35 Aligned_cols=47 Identities=23% Similarity=0.385 Sum_probs=34.7
Q ss_pred CCeEEEEecCCcCCCCCC--------CC-CCCCHHHHHHHHHHhcCCCCeEEEEcCC
Q 003682 531 KNRAILLDYDGTIMVPGS--------IS-TSPNAEAVAILDNLCRDPKNVVFLVSGK 578 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~--------~~-~~is~~~~~aL~~L~~~~g~~v~IaTGR 578 (803)
..|.+.|||||||++..+ .+ ..+.++.-.-|+.| .++|+.++|.|-.
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl-~~~g~~l~iftnq 129 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTL-YQDGIKLFIFTNQ 129 (422)
T ss_pred CcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhh-ccCCeEEEEEecc
Confidence 468999999999998542 11 12345666778888 8889999998743
No 340
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=60.71 E-value=14 Score=35.74 Aligned_cols=44 Identities=20% Similarity=0.142 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCC-hhhHHHHHHcchhcCCCCCCCCcceEEEEeCC
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ 758 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~-~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~ 758 (803)
=+.++++.++.+ ++++++|+++||. .+|+---..+|. +++.|-+
T Consensus 95 ~~~~fr~Al~~m---~l~~~~vvmVGDqL~TDVlggnr~G~-------------~tIlV~P 139 (175)
T COG2179 95 FGRAFRRALKEM---NLPPEEVVMVGDQLFTDVLGGNRAGM-------------RTILVEP 139 (175)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcchhhhhhhcccccCc-------------EEEEEEE
Confidence 367899999999 9999999999997 677765555554 6777765
No 341
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=60.44 E-value=8.5 Score=39.29 Aligned_cols=58 Identities=21% Similarity=0.366 Sum_probs=42.6
Q ss_pred cCCeEEEEecCCcCCCCCCC-----------------------CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhh-HHH
Q 003682 530 TKNRAILLDYDGTIMVPGSI-----------------------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT-LAE 585 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~-----------------------~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~-l~~ 585 (803)
.+.+.|++|||-|+++..+- ..++-+...+.|+-. ...|..|+.+|-|..+. ...
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yv-n~~Gg~ifyiSNR~~~~~~~~ 155 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYV-NSNGGKIFYISNRDQENEKDG 155 (274)
T ss_pred CCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHH-HhcCcEEEEEeccchhcccch
Confidence 45569999999999985421 123456778888885 88999999999999886 444
Q ss_pred Hhh
Q 003682 586 WFS 588 (803)
Q Consensus 586 ~~~ 588 (803)
-+.
T Consensus 156 T~~ 158 (274)
T COG2503 156 TIE 158 (274)
T ss_pred hHH
Confidence 443
No 342
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=60.20 E-value=54 Score=32.08 Aligned_cols=48 Identities=21% Similarity=0.227 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHhh----cCCCCCeEEEeCccccchHHHHHhhCCCCeEEEE
Q 003682 118 WQAYVSVNKIFADKVMEV----ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFF 169 (803)
Q Consensus 118 w~~Y~~vN~~fa~~i~~~----~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f 169 (803)
|+.=..-=+..|+.+.+. +.| |+|.-| +-+.-+-+|++.+|++++.-+
T Consensus 43 ~e~~~~rg~av~~a~~~L~~~Gf~P--DvI~~H--~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 43 FEAAVLRGQAVARAARQLRAQGFVP--DVIIAH--PGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCC--CEEEEc--CCcchhhhHHHhCCCCcEEEE
Confidence 444333344444444443 335 999999 999999999999999998744
No 343
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=59.99 E-value=16 Score=39.75 Aligned_cols=51 Identities=14% Similarity=0.069 Sum_probs=37.4
Q ss_pred CcccEEEEeCCh-hhHHHHHHcchhcCCCCCCCCcceEEEEeCC--C-----CccceeEeCCHhHHHHHH
Q 003682 716 LPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--K-----PSKAKYYLDDTAEILRML 777 (803)
Q Consensus 716 ~~d~vla~GD~~-NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~--~-----~s~A~~~v~~~~ev~~~L 777 (803)
+++++++|||+. +|+.+.+.+|.. .+-|..|. . .-.++|++++..++.++|
T Consensus 262 ~~~~~~mIGD~~~tDI~ga~~~G~~-----------silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 262 PFHALYMVGDNPASDIIGAQNYGWF-----------SCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred ChheEEEEcCChhhhhhhHHhCCce-----------EEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 468999999996 999999999873 23344441 1 124678899998888765
No 344
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=59.49 E-value=1.6e+02 Score=35.45 Aligned_cols=134 Identities=13% Similarity=0.087 Sum_probs=73.1
Q ss_pred CCCEEEEeecCcccccCHHH-HHH---HHHHHHHhCCCCCC-cEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003682 273 KGQIVMLGVDDMDIFKGISL-KLL---AMEQLLSQNPSKRG-KIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 347 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~-~l~---A~~~ll~~~p~~~~-~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~ 347 (803)
++.-.++.+-|+..-|-... .|. -+.+++ +.|+... .+++|..|-...++. .-.++-+.+.+++..||..-.-
T Consensus 442 p~slfdv~~rR~heYKRq~LniL~ii~~y~rik-~~p~~~~~Pv~~IFaGKAhP~d~-~gK~iIk~I~~va~~in~Dp~v 519 (713)
T PF00343_consen 442 PDSLFDVQARRFHEYKRQLLNILHIIDRYNRIK-NNPNKKIRPVQFIFAGKAHPGDY-MGKEIIKLINNVAEVINNDPEV 519 (713)
T ss_dssp TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHH-HSTTSCCS-EEEEEE----TT-H-HHHHHHHHHHHHHHHHCT-TTT
T ss_pred cchhhhhhhhhcccccccCcccccHHHHHHHHH-hcccCCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHHhcChhh
Confidence 35567889999999997666 333 344443 4565333 366776664332221 2235666777777777754222
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcccceecccc--cCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccc
Q 003682 348 PGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVR--DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC 425 (803)
Q Consensus 348 ~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~--EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~ 425 (803)
.+.-.|+|+. ..+-.--..++.++||-+-+|++ |.=|..-+=||. .|.+.+|..-|+
T Consensus 520 ~~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~--------------------NGaL~lstlDG~ 578 (713)
T PF00343_consen 520 GDRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAM--------------------NGALNLSTLDGW 578 (713)
T ss_dssp CCGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHH--------------------TT-EEEEESSTC
T ss_pred ccceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhc--------------------CCCeEEecccch
Confidence 2233466666 46666667889999999999873 433333333333 477888888887
Q ss_pred cccC
Q 003682 426 SPSL 429 (803)
Q Consensus 426 ~~~l 429 (803)
--++
T Consensus 579 niEi 582 (713)
T PF00343_consen 579 NIEI 582 (713)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 5554
No 345
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=59.44 E-value=72 Score=37.00 Aligned_cols=100 Identities=20% Similarity=0.155 Sum_probs=70.7
Q ss_pred EEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003682 276 IVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 355 (803)
Q Consensus 276 ~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~ 355 (803)
.++++.. .+.|=.++.+.-+-++++.-|+-. |++-+.+ +..+....++.++++-. .+.. ...
T Consensus 431 vVf~c~~--n~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~G-----v~~e-RL~ 492 (620)
T COG3914 431 VVFCCFN--NYFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAEREG-----VDSE-RLR 492 (620)
T ss_pred EEEEecC--CcccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHcC-----CChh-hee
Confidence 3444444 467778889988999999999754 6666533 23356666666666622 2222 334
Q ss_pred ecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeee
Q 003682 356 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 394 (803)
Q Consensus 356 ~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~ 394 (803)
|....+.++-.+-|..||+++-|=-+-| ..++.|++..
T Consensus 493 f~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm 530 (620)
T COG3914 493 FLPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM 530 (620)
T ss_pred ecCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh
Confidence 6667889999999999999999887766 4678899987
No 346
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=59.35 E-value=8.4 Score=40.69 Aligned_cols=60 Identities=15% Similarity=0.342 Sum_probs=44.0
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcE
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 595 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~l 595 (803)
..-.|+||-||.|.. ...+-|.+.++|+.| +..|-.++++|--+..+.+.+++.+..+++
T Consensus 21 ~~DtfifDcDGVlW~----g~~~ipGs~e~l~~L-~~~gK~i~fvTNNStksr~~y~kK~~~lG~ 80 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWL----GEKPIPGSPEALNLL-KSLGKQIIFVTNNSTKSREQYMKKFAKLGF 80 (306)
T ss_pred hcCEEEEcCCcceee----cCCCCCChHHHHHHH-HHcCCcEEEEeCCCcchHHHHHHHHHHhCc
Confidence 468999999999997 333445666666666 555889999999888888887765544444
No 347
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=59.27 E-value=5 Score=38.20 Aligned_cols=33 Identities=15% Similarity=0.017 Sum_probs=27.7
Q ss_pred HHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 703 AQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 703 l~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
..+.++.+ |.+++++++|||+.+|+.+...+|.
T Consensus 104 ~~k~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ngI 136 (148)
T smart00577 104 YVKDLSLL---GRDLSNVIIIDDSPDSWPFHPENLI 136 (148)
T ss_pred EeecHHHc---CCChhcEEEEECCHHHhhcCccCEE
Confidence 55556777 9999999999999999998877664
No 348
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=58.45 E-value=77 Score=31.34 Aligned_cols=13 Identities=8% Similarity=-0.061 Sum_probs=7.2
Q ss_pred EEecCcEEEEeCC
Q 003682 595 IAAEHGYFVRPNY 607 (803)
Q Consensus 595 lia~nGa~i~~~~ 607 (803)
++...|..+..++
T Consensus 9 flDRDGtin~d~~ 21 (181)
T COG0241 9 FLDRDGTINIDKG 21 (181)
T ss_pred EEcCCCceecCCC
Confidence 3445666666554
No 349
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=57.80 E-value=2.1e+02 Score=35.13 Aligned_cols=137 Identities=13% Similarity=0.070 Sum_probs=84.0
Q ss_pred CCCEEEEeecCcccccCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 003682 273 KGQIVMLGVDDMDIFKGISL-KLLAMEQLL--SQNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP 348 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~-~l~A~~~ll--~~~p~~~-~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~ 348 (803)
++...++.+-|+..-|-... .|....++. +++|+.. ..+++|..|-...++. .-.++-+.+..++..||..=.-.
T Consensus 528 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp~v~ 606 (797)
T cd04300 528 PDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY-MAKLIIKLINAVADVVNNDPDVG 606 (797)
T ss_pred CCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHhccChhcC
Confidence 35678899999999887776 666655543 3456532 2366776665443332 22456777888888888653223
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccccc
Q 003682 349 GYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 428 (803)
Q Consensus 349 ~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~ 428 (803)
++-.|+|+.. ..-.--..++.+|||-.-.|+ ..+||--. + +|..++ .|.+.+|..-|+--+
T Consensus 607 ~~lkVVFlen-Y~VslAe~iipaaDvseqis~------ag~EASGT--s--nMK~~l--------NGaltlgtlDGanvE 667 (797)
T cd04300 607 DKLKVVFLPN-YNVSLAEKIIPAADLSEQIST------AGKEASGT--G--NMKFML--------NGALTIGTLDGANVE 667 (797)
T ss_pred CceEEEEeCC-CChHHHHHhhhhhhhhhhCCC------CCccccCC--c--hhhHHh--------cCceeeecccchhHH
Confidence 4445777764 445555578999999877775 45553221 1 122222 467777777776555
Q ss_pred C
Q 003682 429 L 429 (803)
Q Consensus 429 l 429 (803)
+
T Consensus 668 i 668 (797)
T cd04300 668 I 668 (797)
T ss_pred H
Confidence 4
No 350
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=56.72 E-value=87 Score=32.73 Aligned_cols=52 Identities=21% Similarity=0.355 Sum_probs=36.8
Q ss_pred CeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHH
Q 003682 141 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 209 (803)
Q Consensus 141 d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~ 209 (803)
|+|.-....-.++..+|++++.+.+++.-+| |.. |.+ ..|+|-.-.+++.+.
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vVqI~~---Prl------p~~--------~fDlvivp~HD~~~~ 123 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVVQIQD---PRL------PYN--------HFDLVIVPYHDWREE 123 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEEEeeC---CCC------Ccc--------cceEEeccchhhhhh
Confidence 8999999999999999999988766665555 432 222 267776666666543
No 351
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=55.87 E-value=36 Score=35.06 Aligned_cols=61 Identities=13% Similarity=0.279 Sum_probs=42.6
Q ss_pred CHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcC-CChhhHHHHh
Q 003682 519 SIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG-KDRDTLAEWF 587 (803)
Q Consensus 519 ~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTG-R~~~~l~~~~ 587 (803)
++.++.+.|...-..+++.|+|||+-. .+.+.+.++++++..+.+|.+.-| |+.+.+++++
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g--------~~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~ 92 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEG--------KPKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAY 92 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcC--------CcchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHH
Confidence 678888888776456999999999966 223466677765555666555444 6677787776
No 352
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=55.24 E-value=4.1 Score=40.88 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=30.0
Q ss_pred HHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcc
Q 003682 702 VAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 737 (803)
Q Consensus 702 al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag 737 (803)
.+..+++.+ +.+++.|+++||+.||.+|++.||
T Consensus 183 ~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 668888888 888999999999999999999886
No 353
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=54.77 E-value=14 Score=38.16 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhhhCCCCcccEEEEeCC-hhhHHHHHHcchh
Q 003682 700 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSA 739 (803)
Q Consensus 700 g~al~~ll~~l~~~gi~~d~vla~GD~-~NDi~Mf~~ag~s 739 (803)
...-+..++++ ++.|++|+.+||+ .||+.-.+.+|..
T Consensus 171 p~If~~al~~l---~v~Pee~vhIgD~l~nD~~gA~~~G~~ 208 (237)
T KOG3085|consen 171 PRIFQLALERL---GVKPEECVHIGDLLENDYEGARNLGWH 208 (237)
T ss_pred hHHHHHHHHHh---CCChHHeEEecCccccccHhHHHcCCE
Confidence 44667788888 9999999999997 8999999999983
No 354
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=54.07 E-value=13 Score=34.64 Aligned_cols=54 Identities=17% Similarity=0.246 Sum_probs=37.2
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCC--hhhHHHHhhc
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKD--RDTLAEWFSS 589 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~--~~~l~~~~~~ 589 (803)
.-+-++||||.|+.-.+....-..+.++.|.+. |.+|+|+|--. .+.++++...
T Consensus 43 tgiAildL~G~~l~l~S~R~~~~~evi~~I~~~----G~PviVAtDV~p~P~~V~Kia~~ 98 (138)
T PF04312_consen 43 TGIAILDLDGELLDLKSSRNMSRSEVIEWISEY----GKPVIVATDVSPPPETVKKIARS 98 (138)
T ss_pred eEEEEEecCCcEEEEEeecCCCHHHHHHHHHHc----CCEEEEEecCCCCcHHHHHHHHH
Confidence 457789999999974323333345666666665 99999999765 4567776643
No 355
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=52.89 E-value=22 Score=36.86 Aligned_cols=28 Identities=11% Similarity=0.024 Sum_probs=24.0
Q ss_pred EEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCC
Q 003682 720 VLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ 758 (803)
Q Consensus 720 vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~ 758 (803)
++++||+.+|+.+.+.+|. .++.|.+|.
T Consensus 187 ~I~IGDs~~Di~aA~~AGi-----------~~I~v~~G~ 214 (237)
T PRK11009 187 RIFYGDSDNDITAAREAGA-----------RGIRILRAA 214 (237)
T ss_pred eEEEcCCHHHHHHHHHcCC-----------cEEEEecCC
Confidence 8999999999999999997 346777774
No 356
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=52.64 E-value=20 Score=33.03 Aligned_cols=40 Identities=18% Similarity=0.315 Sum_probs=29.6
Q ss_pred HHHHhhcCCCCCeEEEeCccc-cchHHHHHhhCCCCeEEEEEe
Q 003682 130 DKVMEVISPDDDFVWVHDYHL-MVLPTFLRKRFNRVKLGFFLH 171 (803)
Q Consensus 130 ~~i~~~~~~~~d~iwihDyhl-~llp~~lr~~~~~~~i~~flH 171 (803)
.++++..+| |+|++|...- .+++.++++.....|+.+..|
T Consensus 67 ~k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 67 RKIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 445566677 9999999875 566666666555589999999
No 357
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=51.50 E-value=35 Score=30.17 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQ 331 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~ 331 (803)
..|...++++++.+|+.+ +|.||.....|.+.|.++.
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~ia 85 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAEIA 85 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHHHH
Confidence 588899999999999987 8888977666655554443
No 358
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=50.52 E-value=8.3 Score=37.95 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=28.0
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHH
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFE 734 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~ 734 (803)
+|..+++.+...... +.+.+.++++|||.||++|++
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 699999999211111 456789999999999999986
No 359
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=49.95 E-value=25 Score=42.64 Aligned_cols=69 Identities=20% Similarity=0.218 Sum_probs=0.0
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCC--CCccceeE
Q 003682 689 IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYY 766 (803)
Q Consensus 689 ~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~--~~s~A~~~ 766 (803)
+-|+.|.+ |..-++.|.+. + .-+.++||+.||-+.|-.+..+ +++..|. +...|+.+
T Consensus 766 ~aev~P~~--K~~~Ik~lq~~----~---~~VaMVGDGINDaPALA~AdVG------------Iaig~gs~vAieaADIV 824 (951)
T KOG0207|consen 766 YAEVLPEQ--KAEKIKEIQKN----G---GPVAMVGDGINDAPALAQADVG------------IAIGAGSDVAIEAADIV 824 (951)
T ss_pred EeccCchh--hHHHHHHHHhc----C---CcEEEEeCCCCccHHHHhhccc------------eeeccccHHHHhhCCEE
Q ss_pred e--CCHhHHHHHHH
Q 003682 767 L--DDTAEILRMLL 778 (803)
Q Consensus 767 v--~~~~ev~~~L~ 778 (803)
+ ++..+|...++
T Consensus 825 Lmrn~L~~v~~ai~ 838 (951)
T KOG0207|consen 825 LMRNDLRDVPFAID 838 (951)
T ss_pred EEccchhhhHHHHH
No 360
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=49.20 E-value=1.5e+02 Score=34.88 Aligned_cols=169 Identities=14% Similarity=0.146 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc-EEEecCCCCHHHHHHH
Q 003682 290 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP-VVLIDTPLQFYERIAY 368 (803)
Q Consensus 290 i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~-v~~~~~~~~~~~l~al 368 (803)
-+..|+.+.++|++-|+-+ |++..-|.-++ +..+.-+++ .|..| .+.|..-...+|=..-
T Consensus 772 dP~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~rf~ty~~~-----------~Gl~p~riifs~va~k~eHvrr 832 (966)
T KOG4626|consen 772 DPSTLQMWANILKRVPNSV----LWLLRFPAVGE----QRFRTYAEQ-----------LGLEPDRIIFSPVAAKEEHVRR 832 (966)
T ss_pred CHHHHHHHHHHHHhCCcce----eEEEeccccch----HHHHHHHHH-----------hCCCccceeeccccchHHHHHh
Confidence 3567899999999999866 77666666444 233333333 23333 3344444556777778
Q ss_pred HHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCC-CceeCCCCHHHHHHHH
Q 003682 369 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG-AIRVNPWNIDAVAEAM 447 (803)
Q Consensus 369 y~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~-~~lvnP~d~~~~a~ai 447 (803)
++.|||++-|++.-|-- +-.|-+.++.|--.| +|-..+|..+++.-.--| |-+| ..+.++-.+.-
T Consensus 833 ~~LaDv~LDTplcnGhT-Tg~dvLw~GvPmVTm------------pge~lAsrVa~Sll~~~Gl~hli-ak~~eEY~~ia 898 (966)
T KOG4626|consen 833 GQLADVCLDTPLCNGHT-TGMDVLWAGVPMVTM------------PGETLASRVAASLLTALGLGHLI-AKNREEYVQIA 898 (966)
T ss_pred hhhhhhcccCcCcCCcc-cchhhhccCCceeec------------ccHHHHHHHHHHHHHHcccHHHH-hhhHHHHHHHH
Confidence 99999999999988864 445666653321100 122333444432211112 2233 23445544422
Q ss_pred HHHhCCCHHHHHHHHHHhhccccc--CCHHHHHHHHHHHHHHHHHh
Q 003682 448 DSALGVSDAEKQMRHEKHYRYVST--HDVAYWARSFLQDLERACRD 491 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v~~--~~~~~W~~~~l~~l~~~~~~ 491 (803)
-++-+..+.-+..|.+-...++.. ++..+|+..+-....+.++.
T Consensus 899 V~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 899 VRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 233232333333333332233333 78888988766655555544
No 361
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=48.86 E-value=22 Score=39.49 Aligned_cols=70 Identities=13% Similarity=0.104 Sum_probs=48.6
Q ss_pred HHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC----CC----Cce-
Q 003682 364 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL----SG----AIR- 434 (803)
Q Consensus 364 ~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l----~~----~~l- 434 (803)
++-.+.+.|.+.|+||.+|..|-++.|.-..+ -|-|.+..+|...-+ .+ |+.
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMG-------------------iPSvtTNlSGFGcfMeehi~d~~ayGIYI 553 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-------------------IPSVTTNLSGFGCFMEEHIEDPQAYGIYI 553 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEec-------------------cccccccccchhhhHHHHhcCchhceEEE
Confidence 45677899999999999999999999988873 455666666655444 11 443
Q ss_pred eC-----C-CCHHHHHHHHHHHhC
Q 003682 435 VN-----P-WNIDAVAEAMDSALG 452 (803)
Q Consensus 435 vn-----P-~d~~~~a~ai~~aL~ 452 (803)
|+ | .+++++++-|.+...
T Consensus 554 vDRRfks~deSv~qL~~~m~~F~~ 577 (692)
T KOG3742|consen 554 VDRRFKSPDESVQQLASFMYEFCK 577 (692)
T ss_pred EecccCChhhHHHHHHHHHHHHHH
Confidence 32 2 345677777766654
No 362
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=44.98 E-value=3.5e+02 Score=27.45 Aligned_cols=160 Identities=19% Similarity=0.273 Sum_probs=88.0
Q ss_pred CCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHH
Q 003682 173 PFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQL 252 (803)
Q Consensus 173 pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f 252 (803)
-||.+++||.+. +..|++-|-.-|-+-|.|+.-+-|-+. ..|+-.+. .-.+.++| |++.+.+
T Consensus 32 efpDydvfrAfT-S~kIIkkLK~rdgi~~dTP~~aL~klk------------~~gy~evi----iQ~lhiIp-G~EyEkl 93 (265)
T COG4822 32 EFPDYDVFRAFT-SRKIIKKLKERDGIDFDTPIQALNKLK------------DQGYEEVI----IQPLHIIP-GIEYEKL 93 (265)
T ss_pred hCccHHHHHHHh-HHHHHHHHHhhcCcccCCHHHHHHHHH------------Hccchhee----eeeeeecC-chHHHHH
Confidence 388999998774 456788888889999999987765553 11110010 11344555 8887766
Q ss_pred HHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHH
Q 003682 253 QSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQS 332 (803)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~ 332 (803)
. ..++.++..|. .+.++.-=|.+.-.-...++| +..+.|-++.+-.+|..|-++. .+....+ .
T Consensus 94 v---------r~V~~~~~dF~--~lkig~PlLy~k~DYe~~v~a---ik~~~ppl~k~e~~vlmgHGt~--h~s~~~Y-a 156 (265)
T COG4822 94 V---------REVNKYSNDFK--RLKIGRPLLYYKNDYEICVEA---IKDQIPPLNKDEILVLMGHGTD--HHSNAAY-A 156 (265)
T ss_pred H---------HHHHHHhhhhh--eeecCCceeechhhHHHHHHH---HHHhcCCcCcCeEEEEEecCCC--ccHHHHH-H
Confidence 4 33445555442 233333333333344444555 4457888877766777776552 2222222 2
Q ss_pred HHHHHHHHHhcccCCCCcccEEE--ecCCCCHHHHHHHHHhccc
Q 003682 333 ETHATVRRINKIFGRPGYQPVVL--IDTPLQFYERIAYYVIAEC 374 (803)
Q Consensus 333 ~v~~lv~~in~~~~~~~~~~v~~--~~~~~~~~~l~aly~~Adv 374 (803)
.++..... .++.|+.. ..+.-..+.+...++..-+
T Consensus 157 cLd~~~~~-------~~f~~v~v~~ve~yP~~d~vi~~l~~~~~ 193 (265)
T COG4822 157 CLDHVLDE-------YGFDNVFVAAVEGYPLVDTVIEYLRKNGI 193 (265)
T ss_pred HHHHHHHh-------cCCCceEEEEecCCCcHHHHHHHHHHcCC
Confidence 22222222 34444433 3455566778888887654
No 363
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=43.32 E-value=18 Score=35.43 Aligned_cols=39 Identities=8% Similarity=0.062 Sum_probs=29.8
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..+.|..++.++.. ++++++|+++||-.-..+..++.++
T Consensus 72 i~Idp~fKef~e~i-ke~di~fiVvSsGm~~fI~~lfe~i 110 (220)
T COG4359 72 IKIDPGFKEFVEWI-KEHDIPFIVVSSGMDPFIYPLFEGI 110 (220)
T ss_pred cccCccHHHHHHHH-HHcCCCEEEEeCCCchHHHHHHHhh
Confidence 34567777877774 8888888888888888888887544
No 364
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=42.90 E-value=37 Score=35.12 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhhhCCCC-cccEEEEeCC-hhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGML-PDFVLCIGDD-RSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~-~d~vla~GD~-~NDi~Mf~~ag~ 738 (803)
+....+.+++++ +.. ++++++|||+ .+|+.+-+.+|.
T Consensus 197 ~~~~~~~~~~~~---~~~~~~~~~~vGD~~~~Di~~a~~~G~ 235 (242)
T TIGR01459 197 YPAIFHKALKEC---SNIPKNRMLMVGDSFYTDILGANRLGI 235 (242)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEECCCcHHHHHHHHHCCC
Confidence 456777888887 764 6789999999 699999999987
No 365
>cd01570 NAPRTase_A Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A. Nicotinate phosphoribosyltransferase catalyses the formation of NAMN and PPi from 5-phosphoribosy -1-pyrophosphate (PRPP) and nicotinic acid, this is the first, and also rate limiting, reaction in the NAD salvage synthesis. This salvage pathway serves to recycle NAD degradation products. This subgroup is present in bacteria and eukaryota (except funghi).
Probab=42.79 E-value=2.7e+02 Score=30.31 Aligned_cols=108 Identities=16% Similarity=0.205 Sum_probs=59.4
Q ss_pred cccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCccccc-CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 003682 244 PVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFK-GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 322 (803)
Q Consensus 244 p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~K-gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~ 322 (803)
|.|..+-.+...... .....+.+.+.|++ ..++-+|..+..+ |+...++.++.+.++... +.-|-. .| |
T Consensus 189 ~~GT~aHs~i~~~~~--e~~A~~~~~~~~p~-~~i~L~Dtyd~~~~~~~~~l~~~~~l~~~~~~----~~gvR~--DS-G 258 (327)
T cd01570 189 VSGTMAHSFVQAFDD--ELAAFRAFAEAYPD-NFTLLVDTYDTLRSGLPNAIAVAKELGALGYR----LVGVRI--DS-G 258 (327)
T ss_pred cccccHHHHHHhhhh--HHHHHHHHHHHCCC-CcEEEEEcccchhhhHHHHHHHHHHHHhhCCC----ceEEEe--CC-C
Confidence 566655444332211 22334445566776 4566779999884 999999999886543221 112211 11 2
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCccc-EEEecCCCCHHHHHHHHHh
Q 003682 323 RGRDVQEVQSETHATVRRINKIFGRPGYQP-VVLIDTPLQFYERIAYYVI 371 (803)
Q Consensus 323 ~~~~~~~l~~~v~~lv~~in~~~~~~~~~~-v~~~~~~~~~~~l~aly~~ 371 (803)
+ -.++-.++.+.-++ .++.+ .+++.+.++.+.+..+++.
T Consensus 259 d---~~~~~~~~r~~l~~-------~G~~~~~Iv~Sdgld~~~i~~l~~~ 298 (327)
T cd01570 259 D---LAYLSKEARKMLDE-------AGLTKVKIVASNDLDEYTIAALNAQ 298 (327)
T ss_pred C---HHHHHHHHHHHHHH-------CCCCCcEEEEeCCCCHHHHHHHHHC
Confidence 2 22333333333333 23333 3456778999999998874
No 366
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=40.65 E-value=29 Score=40.10 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCC
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAG 742 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~ 742 (803)
|..+++ +.+ |.+... ++.|||.+|.+||+.|++.++.
T Consensus 177 Kv~rl~---~~~---g~~~~~-~aYgDS~sD~plL~~a~e~y~V 213 (497)
T PLN02177 177 KRDAVL---KEF---GDALPD-LGLGDRETDHDFMSICKEGYMV 213 (497)
T ss_pred HHHHHH---HHh---CCCCce-EEEECCccHHHHHHhCCccEEe
Confidence 766666 334 544444 8999999999999999986543
No 367
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=40.53 E-value=2.7e+02 Score=34.12 Aligned_cols=137 Identities=13% Similarity=0.076 Sum_probs=82.6
Q ss_pred CCCEEEEeecCcccccCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCC
Q 003682 273 KGQIVMLGVDDMDIFKGISL-KLLAMEQLL--SQNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP 348 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~-~l~A~~~ll--~~~p~~~-~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~ 348 (803)
++...++.+-|+..-|-... .|...+++. .++|+.. ..+++|..|-...++. .-.++-+.+..++..||..=.-.
T Consensus 525 p~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~iN~Dp~v~ 603 (794)
T TIGR02093 525 PNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH-MAKLIIKLINSVAEVVNNDPAVG 603 (794)
T ss_pred ccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH-HHHHHHHHHHHHHHHhccChhhC
Confidence 34567788999998887776 666655543 3456542 2456776665443332 23456777888888888643223
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccccc
Q 003682 349 GYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 428 (803)
Q Consensus 349 ~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~ 428 (803)
+.-.|+|+.. .+-.--..++.+|||-.-.|+ ..+||--. + +|..++ .|.+.+|..-|+--+
T Consensus 604 ~~lkVVFlen-Y~VslAe~iipaaDvseqist------ag~EASGT--s--nMK~al--------NGaltlgtlDGanvE 664 (794)
T TIGR02093 604 DKLKVVFVPN-YNVSLAELIIPAADLSEQIST------AGKEASGT--G--NMKFML--------NGALTIGTLDGANVE 664 (794)
T ss_pred CceeEEEeCC-CChHHHHHhhhhhhhhhhCCC------CCccccCc--c--hhHHHh--------cCcceeecccchhHH
Confidence 4445777764 455555678999999877776 45553221 1 122222 366777777776554
Q ss_pred C
Q 003682 429 L 429 (803)
Q Consensus 429 l 429 (803)
+
T Consensus 665 i 665 (794)
T TIGR02093 665 I 665 (794)
T ss_pred H
Confidence 4
No 368
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=39.26 E-value=95 Score=32.08 Aligned_cols=61 Identities=18% Similarity=0.333 Sum_probs=44.6
Q ss_pred CHHHHHHHHHh-c-CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcC-CChhhHHHHh
Q 003682 519 SIDHIVSAYKR-T-KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG-KDRDTLAEWF 587 (803)
Q Consensus 519 ~~~~~~~~y~~-~-~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTG-R~~~~l~~~~ 587 (803)
++.++++.|.. . -..+.++|+||+.-. .+.+.+.|+++++..+.++.+--| |+.+.+++++
T Consensus 32 dp~~~a~~~~~~~Ga~~l~ivDLd~a~~~--------~~~n~~~I~~i~~~~~~pi~vGGGIrs~e~v~~~l 95 (234)
T PRK13587 32 SAEESIAYYSQFECVNRIHIVDLIGAKAQ--------HAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYF 95 (234)
T ss_pred CHHHHHHHHHhccCCCEEEEEECcccccC--------CcchHHHHHHHHhhcCCeEEEcCCcCCHHHHHHHH
Confidence 56678888987 3 378999999999755 345677777776666677665544 6677777777
No 369
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=39.01 E-value=68 Score=34.37 Aligned_cols=115 Identities=12% Similarity=0.047 Sum_probs=66.5
Q ss_pred CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
.++.+++++|-.+.. ..+++ ++..|+++ ++.+|.+. .+ .+ ...
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~----l~~~~~~~----~~v~g~~~----~~----------------~~-----~~n 233 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEA----LKALPDYQ----FIVFGPNA----AD----------------PR-----PGN 233 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHH----HHhCCCCe----EEEEcCCc----cc----------------cc-----CCC
Confidence 457899999988777 33333 34456555 55555321 00 00 012
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC---
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--- 429 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l--- 429 (803)
+. +. ..+..++..++..||+++-. -|+++ ..|+++++. |+|+--..|..|+.
T Consensus 234 i~-~~-~~~~~~~~~~m~~ad~vIs~---~G~~t-~~Ea~~~g~-------------------P~l~ip~~~~~EQ~~~a 288 (318)
T PF13528_consen 234 IH-VR-PFSTPDFAELMAAADLVISK---GGYTT-ISEALALGK-------------------PALVIPRPGQDEQEYNA 288 (318)
T ss_pred EE-Ee-ecChHHHHHHHHhCCEEEEC---CCHHH-HHHHHHcCC-------------------CEEEEeCCCCchHHHHH
Confidence 33 22 23357899999999998875 46663 569999844 45555554544443
Q ss_pred ------CCCceeCCC--CHHHHHHHHHH
Q 003682 430 ------SGAIRVNPW--NIDAVAEAMDS 449 (803)
Q Consensus 430 ------~~~~lvnP~--d~~~~a~ai~~ 449 (803)
+-|..+++. +++.++++|.+
T Consensus 289 ~~l~~~G~~~~~~~~~~~~~~l~~~l~~ 316 (318)
T PF13528_consen 289 RKLEELGLGIVLSQEDLTPERLAEFLER 316 (318)
T ss_pred HHHHHCCCeEEcccccCCHHHHHHHHhc
Confidence 114444443 45777777654
No 370
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=38.93 E-value=2.5e+02 Score=31.69 Aligned_cols=102 Identities=15% Similarity=0.094 Sum_probs=59.0
Q ss_pred EecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccc-------cccc
Q 003682 355 LIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-------GCSP 427 (803)
Q Consensus 355 ~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~-------G~~~ 427 (803)
+....+++.+ ++..||+++-. -|+|.+ .|++..+. |+|+=-.. ...+
T Consensus 287 ~v~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~gv-------------------P~vv~P~~~DQ~~nA~rve 340 (406)
T COG1819 287 IVADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAGV-------------------PLVVIPDGADQPLNAERVE 340 (406)
T ss_pred EEecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcCC-------------------CEEEecCCcchhHHHHHHH
Confidence 4455666544 78999998864 588855 58888733 34442111 1112
Q ss_pred cCCCCce--eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHH
Q 003682 428 SLSGAIR--VNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 484 (803)
Q Consensus 428 ~l~~~~l--vnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 484 (803)
.+.-|.. ..+...+.++++|.++|+++.-. .+.+++++....+...+=+.+.+.+
T Consensus 341 ~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~--~~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 341 ELGAGIALPFEELTEERLRAAVNEVLADDSYR--RAAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred HcCCceecCcccCCHHHHHHHHHHHhcCHHHH--HHHHHHHHHhhhcccHHHHHHHHHH
Confidence 2233544 44789999999999999855432 2233344444445444434444433
No 371
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=37.67 E-value=1.1e+02 Score=32.27 Aligned_cols=96 Identities=17% Similarity=0.247 Sum_probs=55.1
Q ss_pred CCCEEEEeecCccccc-------CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhccc
Q 003682 273 KGQIVMLGVDDMDIFK-------GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIF 345 (803)
Q Consensus 273 ~~~~iil~V~Rld~~K-------gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~ 345 (803)
.++++|+...-+...- .....++.++.+.+.+|+++ +++=--|.......+ ....++
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~----lvvK~HP~~~~~~~~--------~~~~~~---- 178 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAK----LVVKPHPDERGGNKY--------SYLEEL---- 178 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCE----EEEEECchhhCCCCh--------hHhhhh----
Confidence 4566777776666542 44566777888888999765 554444421111111 111111
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHHhcccce-ecccccCCCCCceeeeeee
Q 003682 346 GRPGYQPVVLIDTPLQFYERIAYYVIAECCL-VTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 346 ~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v-~~S~~EG~~lv~~Ea~a~~ 395 (803)
.....++++....+ +..|+..||.++ ++|. |.+||+..+
T Consensus 179 --~~~~~~~~~~~~~~---~~~Ll~~s~~VvtinSt------vGlEAll~g 218 (269)
T PF05159_consen 179 --PNLPNVVIIDDDVN---LYELLEQSDAVVTINST------VGLEALLHG 218 (269)
T ss_pred --hcCCCeEEECCCCC---HHHHHHhCCEEEEECCH------HHHHHHHcC
Confidence 11123555655554 667788899754 6664 888999983
No 372
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=35.98 E-value=3.1e+02 Score=31.98 Aligned_cols=78 Identities=10% Similarity=0.011 Sum_probs=47.8
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccc----cccc
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPS 428 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G----~~~~ 428 (803)
-+++.+.+|+.++.+- ..+++||- .-|+| ...||+.++. |+|+--..+ .+.-
T Consensus 347 Nv~i~~w~Pq~~lL~h-p~v~~fIt---HGG~~-s~~Eal~~Gv-------------------P~v~iP~~~DQ~~Na~r 402 (507)
T PHA03392 347 NVLTQKWFPQRAVLKH-KNVKAFVT---QGGVQ-STDEAIDALV-------------------PMVGLPMMGDQFYNTNK 402 (507)
T ss_pred ceEEecCCCHHHHhcC-CCCCEEEe---cCCcc-cHHHHHHcCC-------------------CEEECCCCccHHHHHHH
Confidence 3456678887665432 45666663 45655 6679999844 444433322 2222
Q ss_pred C---CCCceeCC--CCHHHHHHHHHHHhCCC
Q 003682 429 L---SGAIRVNP--WNIDAVAEAMDSALGVS 454 (803)
Q Consensus 429 l---~~~~lvnP--~d~~~~a~ai~~aL~~~ 454 (803)
+ +.|+.+++ .+.+++++||.++|+.+
T Consensus 403 v~~~G~G~~l~~~~~t~~~l~~ai~~vl~~~ 433 (507)
T PHA03392 403 YVELGIGRALDTVTVSAAQLVLAIVDVIENP 433 (507)
T ss_pred HHHcCcEEEeccCCcCHHHHHHHHHHHhCCH
Confidence 2 22666655 46789999999999864
No 373
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=32.27 E-value=87 Score=30.08 Aligned_cols=40 Identities=10% Similarity=-0.025 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
=|...++.+.+.+. .-...++++|||..+|..+.+.+|..
T Consensus 102 ~K~~~l~~i~~~~~--~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 102 FKIACLRDIKSLFP--PQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHHHHhcC--CCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 47888888887652 12346778899999999999999984
No 374
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=30.88 E-value=2.8e+02 Score=25.70 Aligned_cols=71 Identities=21% Similarity=0.238 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003682 292 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 371 (803)
Q Consensus 292 ~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~ 371 (803)
..+..+..+.++++ +..++||.|-..++.. .+....+.+.++++..+++ .||.++....+-.+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHH
Confidence 45677777777764 3478899887666544 3456677888888887774 378888888887777777765
Q ss_pred c
Q 003682 372 A 372 (803)
Q Consensus 372 A 372 (803)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 375
>KOG2648 consensus Diphthamide biosynthesis protein [Translation, ribosomal structure and biogenesis]
Probab=29.87 E-value=1.9e+02 Score=32.63 Aligned_cols=45 Identities=24% Similarity=0.286 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003682 261 TEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA 320 (803)
Q Consensus 261 ~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~ 320 (803)
+.++.+.+.+..+-|.+++.+||+.|.| |.+.|+. -++|||+.|-
T Consensus 284 vl~~L~~~~~~~Gkk~y~l~~g~inPaK------------LAnF~eI---DvfV~iaCp~ 328 (453)
T KOG2648|consen 284 VLEHLRKLLKAAGKKSYVLALGEINPAK------------LANFPEI---DVFVQIACPR 328 (453)
T ss_pred HHHHHHHHHHHcCCceEEEEecCCCHHH------------hcCCccc---cEEEEEeCcc
Confidence 3334444434445678999999999887 3345664 4799999874
No 376
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=29.72 E-value=44 Score=36.14 Aligned_cols=66 Identities=15% Similarity=0.044 Sum_probs=42.4
Q ss_pred HHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC---------CCCc
Q 003682 363 YERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---------SGAI 433 (803)
Q Consensus 363 ~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l---------~~~~ 433 (803)
+++.++|..||+++..+ |++ +..|++++ |.|+|+.-..|-.++. +.|+
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~-------------------g~P~l~ip~~~~~eQ~~na~~l~~~g~~~ 295 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSL-------------------GKPLIVIPDLGQFEQGNNAVKLEDLGCGI 295 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHc-------------------CCCEEEEcCCCcccHHHHHHHHHHCCCEE
Confidence 68999999999999876 555 47799998 4456666665543432 2255
Q ss_pred eeCCCCHHHHHHHHHHHhC
Q 003682 434 RVNPWNIDAVAEAMDSALG 452 (803)
Q Consensus 434 lvnP~d~~~~a~ai~~aL~ 452 (803)
.++..+. ++.+++.+.++
T Consensus 296 ~l~~~~~-~~~~~~~~~~~ 313 (321)
T TIGR00661 296 ALEYKEL-RLLEAILDIRN 313 (321)
T ss_pred EcChhhH-HHHHHHHhccc
Confidence 6655555 44444444443
No 377
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=28.91 E-value=3.5e+02 Score=33.17 Aligned_cols=136 Identities=15% Similarity=0.088 Sum_probs=82.2
Q ss_pred CCEEEEeecCcccccCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC
Q 003682 274 GQIVMLGVDDMDIFKGISL-KLLAMEQLLS--QNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG 349 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~-~l~A~~~ll~--~~p~~~-~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~ 349 (803)
+...++.+-|+..-|-... .|....++.+ ++|+.. ..+++|..|-...++ ..-.++-+.+..++..||..=.-.+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhcCChhhCC
Confidence 4567788999998887766 6666555433 456633 246677666544333 2224566778888888875422233
Q ss_pred cccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC
Q 003682 350 YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 429 (803)
Q Consensus 350 ~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l 429 (803)
.-.|+|+.. .+-.--..++.+|||-.-+|+ ..+||--. + +|..++ .|++.+|..-|+--++
T Consensus 607 ~lkVVFlen-Y~VslAe~lipaaDvseqis~------ag~EASGT--s--nMK~am--------NGaLtlgtlDGanvEi 667 (798)
T PRK14985 607 KLKVVFLPD-YCVSAAELLIPAADISEQIST------AGKEASGT--G--NMKLAL--------NGALTVGTLDGANVEI 667 (798)
T ss_pred ceeEEEeCC-CChHHHHHHhhhhhhhhhCCC------CCccccCc--c--hhHHHh--------cCceeeecccchHHHH
Confidence 345777764 555556678999999877775 45553221 1 122222 4678888777764444
No 378
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=28.11 E-value=70 Score=33.36 Aligned_cols=62 Identities=16% Similarity=0.240 Sum_probs=40.7
Q ss_pred EEEEecCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhc-----CCCCeEEEEcCCChhhHHH
Q 003682 534 AILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCR-----DPKNVVFLVSGKDRDTLAE 585 (803)
Q Consensus 534 li~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~-----~~g~~v~IaTGR~~~~l~~ 585 (803)
=|+||-|++|.+..+ ....|-......|.+|-+ ..-+.+.|+|.|+...-++
T Consensus 123 RIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~R 202 (264)
T PF06189_consen 123 RIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHER 202 (264)
T ss_pred EEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHH
Confidence 379999999998431 112344566777776622 3457899999999887777
Q ss_pred HhhcCCCCcE
Q 003682 586 WFSSCEGLGI 595 (803)
Q Consensus 586 ~~~~l~~l~l 595 (803)
.++-+...++
T Consensus 203 vI~TLr~Wgv 212 (264)
T PF06189_consen 203 VIRTLRSWGV 212 (264)
T ss_pred HHHHHHHcCC
Confidence 6655433333
No 379
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=27.25 E-value=40 Score=39.03 Aligned_cols=15 Identities=33% Similarity=0.760 Sum_probs=13.2
Q ss_pred CeEEEEecCCcCCCC
Q 003682 532 NRAILLDYDGTIMVP 546 (803)
Q Consensus 532 ~kli~~DlDGTLl~~ 546 (803)
.+.++||+||||+.+
T Consensus 22 ~~~~~FDfDGTLt~~ 36 (497)
T PLN02177 22 NQTVAADLDGTLLIS 36 (497)
T ss_pred ccEEEEecCCcccCC
Confidence 468999999999983
No 380
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=26.40 E-value=65 Score=33.27 Aligned_cols=17 Identities=29% Similarity=0.499 Sum_probs=14.9
Q ss_pred hcCCeEEEEecCCcCCC
Q 003682 529 RTKNRAILLDYDGTIMV 545 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~ 545 (803)
.+.+|+++||++|||+.
T Consensus 4 ~~~iravtfD~~~tLl~ 20 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLA 20 (237)
T ss_pred ccceEEEEEeCCCceee
Confidence 35689999999999997
No 381
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=26.16 E-value=1.6e+02 Score=28.81 Aligned_cols=42 Identities=21% Similarity=0.115 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHHhhhC--CCCcccEEEEeCC-hhhHHHHHHcch
Q 003682 697 VNKGLVAQHQLETMHQK--GMLPDFVLCIGDD-RSDEDMFEVIKS 738 (803)
Q Consensus 697 v~Kg~al~~ll~~l~~~--gi~~d~vla~GD~-~NDi~Mf~~ag~ 738 (803)
.-|..+.+.+++++... ...+++++++||- .+|+-|-...|.
T Consensus 114 ~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~ 158 (168)
T PF09419_consen 114 AKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGS 158 (168)
T ss_pred CCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCc
Confidence 33555555666665111 1358999999996 899998888875
No 382
>PLN00414 glycosyltransferase family protein
Probab=25.70 E-value=6.4e+02 Score=28.81 Aligned_cols=105 Identities=13% Similarity=0.152 Sum_probs=56.8
Q ss_pred cCCCCHHHHHHHHHhccc--ceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEec----ccccccccC-
Q 003682 357 DTPLQFYERIAYYVIAEC--CLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS----EFVGCSPSL- 429 (803)
Q Consensus 357 ~~~~~~~~l~aly~~Adv--~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S----~~~G~~~~l- 429 (803)
.+.+|+.++ ++...+ ||- .-|+| ..+|+++++.| +|+- |-.-.+..+
T Consensus 317 ~~w~PQ~~v---L~h~~v~~fvt---H~G~n-S~~Ea~~~GvP-------------------~l~~P~~~dQ~~na~~~~ 370 (446)
T PLN00414 317 EGWVEQPLI---LSHPSVGCFVN---HCGFG-SMWESLVSDCQ-------------------IVFIPQLADQVLITRLLT 370 (446)
T ss_pred eccCCHHHH---hcCCccceEEe---cCchh-HHHHHHHcCCC-------------------EEecCcccchHHHHHHHH
Confidence 456776664 444433 442 46777 55799998443 3332 221122222
Q ss_pred ---CCCceeCC-----CCHHHHHHHHHHHhCCCHHH---HHHHHHHhhccc-ccCCHHHHHHHHHHHHHH
Q 003682 430 ---SGAIRVNP-----WNIDAVAEAMDSALGVSDAE---KQMRHEKHYRYV-STHDVAYWARSFLQDLER 487 (803)
Q Consensus 430 ---~~~~lvnP-----~d~~~~a~ai~~aL~~~~~e---r~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 487 (803)
.-|+.+.. -+.+++++++++++..+.++ .+.+.+.+++.. ..-....+.++|++.+.+
T Consensus 371 ~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~ 440 (446)
T PLN00414 371 EELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALEN 440 (446)
T ss_pred HHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 22455532 46789999999999764322 122333333333 333335668888888854
No 383
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=25.42 E-value=3.8e+02 Score=25.13 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003682 293 KLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA 372 (803)
Q Consensus 293 ~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~A 372 (803)
.+..+..+.++++ +..++||.|...++.. .+....+.+.+.++..+++ .||++.....+-.+-...|..+
T Consensus 42 ~~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 42 DWDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHc
Confidence 3566666666653 4478899887655443 3455667777777777663 3788888888887777777654
Q ss_pred c
Q 003682 373 E 373 (803)
Q Consensus 373 d 373 (803)
.
T Consensus 112 ~ 112 (138)
T PRK00109 112 G 112 (138)
T ss_pred C
Confidence 3
No 384
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=25.09 E-value=2.8e+02 Score=32.13 Aligned_cols=94 Identities=16% Similarity=0.172 Sum_probs=64.8
Q ss_pred EEeecCcccccCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEe
Q 003682 278 MLGVDDMDIFKGISLKLLAMEQLLSQ-NPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 356 (803)
Q Consensus 278 il~V~Rld~~Kgi~~~l~A~~~ll~~-~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~ 356 (803)
+++++|--.-|.+..+|-|+..+.+. ...-+++---++|-.|+ +||..++.+.+.++-...+ ...+.++
T Consensus 131 ~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLVL~PT-------RELA~QV~~~~~~~~~~~~---~~~~cvy 200 (519)
T KOG0331|consen 131 LVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLVLAPT-------RELAVQVQAEAREFGKSLR---LRSTCVY 200 (519)
T ss_pred eEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEEEcCc-------HHHHHHHHHHHHHHcCCCC---ccEEEEe
Confidence 78899999999999999999999873 33333332233334565 3677777776666654433 3334445
Q ss_pred cCCCCHHHHHHHHHhcccceecccc
Q 003682 357 DTPLQFYERIAYYVIAECCLVTAVR 381 (803)
Q Consensus 357 ~~~~~~~~l~aly~~Adv~v~~S~~ 381 (803)
+|.--..++..+-+.+||++-|+-|
T Consensus 201 GG~~~~~Q~~~l~~gvdiviaTPGR 225 (519)
T KOG0331|consen 201 GGAPKGPQLRDLERGVDVVIATPGR 225 (519)
T ss_pred CCCCccHHHHHHhcCCcEEEeCChH
Confidence 5555567899999999999999853
No 385
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=25.06 E-value=2.4e+02 Score=34.32 Aligned_cols=179 Identities=13% Similarity=0.079 Sum_probs=99.6
Q ss_pred cCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-------
Q 003682 357 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL------- 429 (803)
Q Consensus 357 ~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l------- 429 (803)
-+..+.+.....++.-++++.|+-|+-.=+.++|+-... + +-..+|++...-.++.+
T Consensus 231 vgAm~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~-~---------------~~a~lIlTgg~~~~~~v~~l~~~a 294 (684)
T PRK05632 231 VCARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG-P---------------PIAGLLLTGGYEPDPRIAKLCEGA 294 (684)
T ss_pred EEecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC-C---------------CceEEEEcCCCCCCHHHHHHHhhc
Confidence 345677788888887777777677766555666652111 0 01125555433322222
Q ss_pred --CC-CceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccC-CHHHHHHHHHHHHHHHHHhhccccccccCcCcc
Q 003682 430 --SG-AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTH-DVAYWARSFLQDLERACRDHMRRRCWGIGFGLG 505 (803)
Q Consensus 430 --~~-~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~-~~~~W~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 505 (803)
.+ .++.-|+|+-+.|..|.++..--..+-..+-+...+.+.+| |..+|.+. +. ....
T Consensus 295 ~~~~ipVl~t~~dT~~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~----~~~~-------------- 355 (684)
T PRK05632 295 FETGLPVLSVDTNTYQTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LT----ATSE-------------- 355 (684)
T ss_pred ccCCCCEEEecCCHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hc----cCCC--------------
Confidence 11 46667999999999999776432111123345556666666 76666654 22 0000
Q ss_pred eeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHH
Q 003682 506 FRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAE 585 (803)
Q Consensus 506 ~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~ 585 (803)
|...+.|. .-...+.+.-+..++|+++-. . -.++++++...+ .+.|+--.+.-|+.. .+++
T Consensus 356 -~~~~~~p~---~~~~~l~~~a~~~~~~i~~~e------------~-~d~~~l~Aa~~~-~~~g~~~~iLvG~~~-~I~~ 416 (684)
T PRK05632 356 -RSRRLSPP---AFRYQLTERARAAKKRIVLPE------------G-DEPRTLKAAAIC-LERGIADCVLLGNPE-EIRR 416 (684)
T ss_pred -CCCCcCHH---HHHHHHHHHHhcCCCEEEEeC------------C-CCHHHHHHHHHH-HHcCCceEEEECCHH-HHHH
Confidence 00112221 123455555555666766633 1 157888888885 777877777778764 5555
Q ss_pred Hhhc
Q 003682 586 WFSS 589 (803)
Q Consensus 586 ~~~~ 589 (803)
.+..
T Consensus 417 ~~~~ 420 (684)
T PRK05632 417 VAAA 420 (684)
T ss_pred HHHH
Confidence 5543
No 386
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=24.63 E-value=4.3e+02 Score=28.98 Aligned_cols=74 Identities=12% Similarity=0.275 Sum_probs=40.5
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEec--cc------cc
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS--EF------VG 424 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S--~~------~G 424 (803)
++.+.. .+++..++..||+++ |= +.=++.||+.++ .|+|.- +. .|
T Consensus 254 i~~~~~---~~~~~~ll~~aDiLI-TD----ySSi~fD~~~l~-------------------KPiify~~D~~~Y~~~rg 306 (369)
T PF04464_consen 254 IIFVSD---NEDIYDLLAAADILI-TD----YSSIIFDFLLLN-------------------KPIIFYQPDLEEYEKERG 306 (369)
T ss_dssp EEE-TT----S-HHHHHHT-SEEE-ES----S-THHHHHGGGT---------------------EEEE-TTTTTTTTTSS
T ss_pred EEECCC---CCCHHHHHHhcCEEE-Ee----chhHHHHHHHhC-------------------CCEEEEeccHHHHhhccC
Confidence 544454 348999999999976 21 233788999983 345532 22 22
Q ss_pred ccccCC---CCceeCCCCHHHHHHHHHHHhCCCH
Q 003682 425 CSPSLS---GAIRVNPWNIDAVAEAMDSALGVSD 455 (803)
Q Consensus 425 ~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~ 455 (803)
...... .|-.+ .+.+++.++|..++..+.
T Consensus 307 ~~~~~~~~~pg~~~--~~~~eL~~~i~~~~~~~~ 338 (369)
T PF04464_consen 307 FYFDYEEDLPGPIV--YNFEELIEAIENIIENPD 338 (369)
T ss_dssp BSS-TTTSSSS-EE--SSHHHHHHHHTTHHHHHH
T ss_pred CCCchHhhCCCcee--CCHHHHHHHHHhhhhCCH
Confidence 222221 13333 578999999998876443
No 387
>PRK11590 hypothetical protein; Provisional
Probab=24.62 E-value=1e+02 Score=31.12 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=29.6
Q ss_pred CHHHHHHH-HHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 554 NAEAVAIL-DNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 554 s~~~~~aL-~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
-+.+.+.| +.+ ++.|..++|+|+.+...+++++..+
T Consensus 97 ~pga~e~L~~~l-~~~G~~l~IvSas~~~~~~~il~~l 133 (211)
T PRK11590 97 FPVVQERLTTYL-LSSDADVWLITGSPQPLVEQVYFDT 133 (211)
T ss_pred CccHHHHHHHHH-HhCCCEEEEEeCCcHHHHHHHHHHc
Confidence 36788888 456 6779999999999999999888654
No 388
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=24.11 E-value=1.1e+02 Score=29.63 Aligned_cols=78 Identities=19% Similarity=0.252 Sum_probs=47.5
Q ss_pred CeEEEeCc-cccchHHHHHhhCCCCeEEEEEec-C--CCChhh-hhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHH
Q 003682 141 DFVWVHDY-HLMVLPTFLRKRFNRVKLGFFLHS-P--FPSSEI-YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCS 215 (803)
Q Consensus 141 d~iwihDy-hl~llp~~lr~~~~~~~i~~flH~-p--fP~~~~-~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~ 215 (803)
|+|..-|. .|.-+-++.+ .....|...++|= . +|-++. -+.+-..--=+.+.|.||.|-|.+.-..+.|++.+.
T Consensus 61 dll~aTsmldLa~l~gL~p-~l~~~p~ilYFHENQl~YP~~~~~~rd~~~~~~ni~saLaAD~v~FNS~~nr~sFL~~~~ 139 (168)
T PF12038_consen 61 DLLFATSMLDLATLRGLRP-DLANVPKILYFHENQLAYPVSPGQERDFQYGMNNIYSALAADRVVFNSAFNRDSFLDGIP 139 (168)
T ss_pred CEEEeeccccHHHHHhhcc-CCCCCCEEEEEecCcccCCCCCCccccccHHHHHHHHHHhceeeeecchhhHHHHHHHHH
Confidence 88888764 3444444444 3345666666662 1 343321 111111111234678899999999999999999999
Q ss_pred HHhC
Q 003682 216 RMLG 219 (803)
Q Consensus 216 ~~l~ 219 (803)
.++.
T Consensus 140 ~fL~ 143 (168)
T PF12038_consen 140 SFLK 143 (168)
T ss_pred HHHH
Confidence 9874
No 389
>TIGR01513 NAPRTase_put putative nicotinate phosphoribosyltransferase. Most members of this family are Gram-positive bacteria. An additional set of mutually closely related archaeal sequences score between the trusted and noise cutoffs.
Probab=23.55 E-value=7.1e+02 Score=28.42 Aligned_cols=106 Identities=18% Similarity=0.214 Sum_probs=61.8
Q ss_pred HHHHHHHHhCCCEEEEeecCccccc-CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHh
Q 003682 264 KVAELQDQFKGQIVMLGVDDMDIFK-GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRIN 342 (803)
Q Consensus 264 ~~~~l~~~~~~~~iil~V~Rld~~K-gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in 342 (803)
..+.+.+.|++.. ++-+|..|..+ |+...++.++.|.++. . +. |+ |-|..+-..+..++.+...+.
T Consensus 207 Af~~~~~~~p~~~-i~L~DTyd~~~sg~~~~~~~~~~l~~~~-----~--~~--gV--R~DSGD~~~l~~~vr~~ld~~- 273 (443)
T TIGR01513 207 AFRAYAKLYPKAT-VLLVDTYDTLRSGLPNAIAVAKELGEQG-----K--VV--GV--RIDSGDLLYLSKQARKQLDAA- 273 (443)
T ss_pred HHHHHHHHcCCCc-EEEEEcCCCchhhHHHHHHHHHHHhhhc-----C--ce--eE--ecCCCCHHHHHHHHHHHHHHc-
Confidence 3445556676654 55599999888 9999999998753321 1 21 11 222223334444444444442
Q ss_pred cccCCCCcccE-EEecCCCCHHHHHHHHHh---cccc-----eeccc-ccCCCCCc
Q 003682 343 KIFGRPGYQPV-VLIDTPLQFYERIAYYVI---AECC-----LVTAV-RDGMNLIP 388 (803)
Q Consensus 343 ~~~~~~~~~~v-~~~~~~~~~~~l~aly~~---Adv~-----v~~S~-~EG~~lv~ 388 (803)
|+.++ +++.+.++.+.+..|... +|+| ++++. ++.+|.|.
T Consensus 274 ------G~~~vkIi~S~gLde~~i~~l~~~g~~~d~fGvGt~L~t~~~~~~l~~v~ 323 (443)
T TIGR01513 274 ------GLTQVKIVVSNDLDENSIAALKAEGAPIDVYGVGTSLVTASDAPALGGVY 323 (443)
T ss_pred ------CCCCcEEEEeCCCCHHHHHHHHHCCCceeEEecCcceeecCCCCccceEE
Confidence 23333 445678999999998876 5766 44442 45555543
No 390
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. Examples of this enzyme in Actinobacteria have been found to be bifunctional, also possessing phosphoribosylanthranilate isomerase activity ; the trusted cutoff here has now been raised to 275.0 to exclude the bifunctional group, now represented by model TIGR01919. HisA from Lactococcus lactis was reported to be inactive (MEDLINE:93322317).
Probab=23.45 E-value=2.3e+02 Score=28.89 Aligned_cols=63 Identities=11% Similarity=0.094 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHhcC-CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcC-CChhhHHHHhh
Q 003682 518 LSIDHIVSAYKRTK-NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG-KDRDTLAEWFS 588 (803)
Q Consensus 518 l~~~~~~~~y~~~~-~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTG-R~~~~l~~~~~ 588 (803)
.++.++++.|.... ..+.++|+|+++... ....+.++.+.+. -+.++.+-=| |+.+.++.++.
T Consensus 28 ~dp~~~a~~~~~~g~~~l~v~dl~~~~~g~-----~~~~~~i~~i~~~---~~~pi~~ggGI~~~ed~~~~~~ 92 (230)
T TIGR00007 28 DDPVEAAKKWEEEGAERIHVVDLDGAKEGG-----PVNLPVIKKIVRE---TGVPVQVGGGIRSLEDVEKLLD 92 (230)
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccCC-----CCcHHHHHHHHHh---cCCCEEEeCCcCCHHHHHHHHH
Confidence 47888999997653 578999999998651 1233444444443 3567777555 77788888773
No 391
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=23.44 E-value=1.9e+02 Score=26.79 Aligned_cols=52 Identities=13% Similarity=-0.019 Sum_probs=37.2
Q ss_pred eEEEEecCCcCCCCCCCC------CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHH
Q 003682 533 RAILLDYDGTIMVPGSIS------TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAE 585 (803)
Q Consensus 533 kli~~DlDGTLl~~~~~~------~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~ 585 (803)
+++.+|+|+|+-+..... ..+-+.....|..| ++.|+..++||--....+..
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dL-k~~GVtl~~ASRt~ap~iA~ 76 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDL-KKLGVTLIHASRTMAPQIAS 76 (144)
T ss_pred EEEEecccccccccccCcccCcceeeeccchhHHHHHH-HhcCcEEEEecCCCCHHHHH
Confidence 799999999999843211 12336677788888 88899999998666555443
No 392
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=23.35 E-value=1.3e+02 Score=35.04 Aligned_cols=96 Identities=15% Similarity=0.015 Sum_probs=60.2
Q ss_pred cCCCCHHHHHHHHHhcccce-ecccccCCCCCceeeeeeecCC--cccccccC-CCC--CCCCCc-eEEecccccccccC
Q 003682 357 DTPLQFYERIAYYVIAECCL-VTAVRDGMNLIPYEYIICRQGN--EKLDMTLG-LDP--STAKSS-MLVVSEFVGCSPSL 429 (803)
Q Consensus 357 ~~~~~~~~l~aly~~Adv~v-~~S~~EG~~lv~~Ea~a~~~~~--~~~~~~~~-~~~--~~~~~g-~vV~S~~~G~~~~l 429 (803)
.|.++..|+..+++.|-||| +-.-+| |=.++||||.+... ++..--.+ .+. -..++. -=+.|....+..-+
T Consensus 327 HG~l~~~ef~~lL~~akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 327 HGILSGDEFQQLLRKAKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred cCcCCHHHHHHHHHhhhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 57789999999999999998 333467 45799999986532 11100000 000 000000 12555555433334
Q ss_pred C--CCceeCCCCHHHHHHHHHHHhCCC
Q 003682 430 S--GAIRVNPWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 430 ~--~~~lvnP~d~~~~a~ai~~aL~~~ 454 (803)
+ .-+.|+-.|.+++-+||+++|+++
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 2 257899999999999999999875
No 393
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=23.03 E-value=80 Score=31.51 Aligned_cols=37 Identities=19% Similarity=0.020 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+-+.+.+.|+.| ++.|++++|+|+.+...++.+++.+
T Consensus 86 ~~~g~~~~L~~l-~~~g~~~~i~S~~~~~~~~~~l~~~ 122 (213)
T TIGR01449 86 VFPGVEATLGAL-RAKGLRLGLVTNKPTPLARPLLELL 122 (213)
T ss_pred cCCCHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHc
Confidence 456788899998 7789999999999999888888653
No 394
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.63 E-value=78 Score=25.37 Aligned_cols=27 Identities=22% Similarity=0.482 Sum_probs=22.3
Q ss_pred HHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHH
Q 003682 702 VAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 735 (803)
Q Consensus 702 al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ 735 (803)
-|+.+++.+ |+ ++.|||-.-|++|++.
T Consensus 6 DVqQlLK~~---G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKF---GI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHC---Ce----eeecCCHHHHHHHHHH
Confidence 467777776 64 8999999999999985
No 395
>cd03309 CmuC_like CmuC_like. Proteins similar to the putative corrinoid methyltransferase CmuC. Its function has been inferred from sequence similarity to the methyltransferases CmuA and MtaA. Mutants of Methylobacterium sp. disrupted in cmuC and purU appear deficient in some step of chloromethane metabolism.
Probab=22.44 E-value=5.4e+02 Score=27.92 Aligned_cols=41 Identities=12% Similarity=-0.036 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhC-CCEEEEeecCcccccCHHHHHHHHHHHH
Q 003682 261 TEAKVAELQDQFK-GQIVMLGVDDMDIFKGISLKLLAMEQLL 301 (803)
Q Consensus 261 ~~~~~~~l~~~~~-~~~iil~V~Rld~~Kgi~~~l~A~~~ll 301 (803)
..+.++++.+.++ ++..|++-+.--+...-+..++|..+++
T Consensus 278 i~~~v~~~l~~~g~~~~fIf~~~~~~~~~~~~~~~~~~~~~~ 319 (321)
T cd03309 278 DARGVAKAAAECAPIHPFISAPTAGLPFSIFPEVLRRVSAFL 319 (321)
T ss_pred HHHHHHHHHHHhCCCCCEEeCccCCCCcccCHHHHHHHHHhh
Confidence 4455555555553 3566666654444444466666666554
No 396
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=22.26 E-value=57 Score=30.90 Aligned_cols=38 Identities=16% Similarity=0.285 Sum_probs=32.1
Q ss_pred CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 552 SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 552 ~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.+.+.+.|++| ++.|++++++|+.+...+...+..+
T Consensus 77 ~~~~~~~~~L~~l-~~~~~~~~i~Sn~~~~~~~~~l~~~ 114 (176)
T PF13419_consen 77 QPYPGVRELLERL-KAKGIPLVIVSNGSRERIERVLERL 114 (176)
T ss_dssp EESTTHHHHHHHH-HHTTSEEEEEESSEHHHHHHHHHHT
T ss_pred chhhhhhhhhhhc-ccccceeEEeecCCccccccccccc
Confidence 3456889999998 7779999999999999888888654
No 397
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=21.96 E-value=1.4e+02 Score=36.14 Aligned_cols=66 Identities=14% Similarity=0.224 Sum_probs=49.7
Q ss_pred HHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 524 VSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 524 ~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.+.....-.+++-.||.++.----...+-++..+++++| ++.|+.+++.||-+....+.+.+++
T Consensus 509 ~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L-~~~Gi~~~mLTGDn~~~A~~iA~~l 574 (713)
T COG2217 509 IEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAAL-KALGIKVVMLTGDNRRTAEAIAKEL 574 (713)
T ss_pred HHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 34444444458999999977631002345678899999998 8899999999999999999999654
No 398
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=21.78 E-value=94 Score=30.76 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=27.8
Q ss_pred HHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 557 AVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 557 ~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..++|+.| ++.|++++|+||++...+...+..+
T Consensus 111 ~~~~L~~l-~~~g~~~~i~T~~~~~~~~~~l~~~ 143 (197)
T TIGR01548 111 PKGLLREL-HRAPKGMAVVTGRPRKDAAKFLTTH 143 (197)
T ss_pred HHHHHHHH-HHcCCcEEEECCCCHHHHHHHHHHc
Confidence 47778887 7779999999999999998888654
No 399
>PRK14024 phosphoribosyl isomerase A; Provisional
Probab=21.60 E-value=2.3e+02 Score=29.34 Aligned_cols=61 Identities=20% Similarity=0.226 Sum_probs=43.6
Q ss_pred CHHHHHHHHHhcC-CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcC-CChhhHHHHhh
Q 003682 519 SIDHIVSAYKRTK-NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG-KDRDTLAEWFS 588 (803)
Q Consensus 519 ~~~~~~~~y~~~~-~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTG-R~~~~l~~~~~ 588 (803)
++.++++.|.... ..+.++|+||.. . ...+.+.|+++++.-+.++.+--| |+.+.++.++.
T Consensus 33 dp~~~a~~~~~~g~~~l~ivDLd~~~-g--------~~~n~~~i~~i~~~~~~pv~vgGGirs~edv~~~l~ 95 (241)
T PRK14024 33 SPLDAALAWQRDGAEWIHLVDLDAAF-G--------RGSNRELLAEVVGKLDVKVELSGGIRDDESLEAALA 95 (241)
T ss_pred CHHHHHHHHHHCCCCEEEEEeccccC-C--------CCccHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHH
Confidence 7788899997755 479999999863 3 123456666665555677777666 67788888873
No 400
>PF14201 DUF4318: Domain of unknown function (DUF4318)
Probab=20.88 E-value=1.7e+02 Score=24.41 Aligned_cols=41 Identities=12% Similarity=0.356 Sum_probs=31.2
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCC
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGK 578 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR 578 (803)
+|.|+.|||..+... -.+....+|++.|.+.+..+-++|=.
T Consensus 1 kK~f~IeLdd~~~yP------s~e~i~~aIE~YC~~~~~~l~Fisr~ 41 (74)
T PF14201_consen 1 KKSFFIELDDSPKYP------SKEEICEAIEKYCIKNGESLEFISRD 41 (74)
T ss_pred CceEEEEcccCCCCC------CHHHHHHHHHHHHHHcCCceEEEecC
Confidence 478999999887631 14788999999999888777666544
No 401
>PRK14114 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=20.47 E-value=3.5e+02 Score=28.02 Aligned_cols=62 Identities=13% Similarity=0.140 Sum_probs=41.8
Q ss_pred CCHHHHHHHHHhcC-CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcC-CChhhHHHHhh
Q 003682 518 LSIDHIVSAYKRTK-NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG-KDRDTLAEWFS 588 (803)
Q Consensus 518 l~~~~~~~~y~~~~-~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTG-R~~~~l~~~~~ 588 (803)
-++-++++.|.... ..+.+.|+||+.-. .+.+.+.++++++.. .++.+--| |+.+.++.++.
T Consensus 30 ~dP~~~A~~~~~~ga~~lhivDLd~a~~g--------~~~n~~~i~~i~~~~-~~v~vGGGIrs~e~~~~~l~ 93 (241)
T PRK14114 30 KDPAELVEKLIEEGFTLIHVVDLSKAIEN--------SVENLPVLEKLSEFA-EHIQIGGGIRSLDYAEKLRK 93 (241)
T ss_pred CCHHHHHHHHHHCCCCEEEEEECCCcccC--------CcchHHHHHHHHhhc-CcEEEecCCCCHHHHHHHHH
Confidence 47788899997754 57999999999865 234566666664433 34444444 55677877873
No 402
>KOG0390 consensus DNA repair protein, SNF2 family [Replication, recombination and repair]
Probab=20.40 E-value=6.4e+02 Score=30.88 Aligned_cols=74 Identities=23% Similarity=0.190 Sum_probs=44.0
Q ss_pred eecCcccccCH-HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecC
Q 003682 280 GVDDMDIFKGI-SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDT 358 (803)
Q Consensus 280 ~V~Rld~~Kgi-~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~ 358 (803)
...++++.+|. ..++..+..++...-+- -.+.+|+. .-|....+.++.+..- .++ .+..++|
T Consensus 565 ~~~~~~~~~~~ks~kl~~L~~ll~~~~ek--~~~~~v~I-------sny~~tldl~e~~~~~-------~g~-~~~rLdG 627 (776)
T KOG0390|consen 565 GKLKLDAGDGSKSGKLLVLVFLLEVIREK--LLVKSVLI-------SNYTQTLDLFEQLCRW-------RGY-EVLRLDG 627 (776)
T ss_pred cccccccccchhhhHHHHHHHHHHHHhhh--cceEEEEe-------ccHHHHHHHHHHHHhh-------cCc-eEEEEcC
Confidence 44588888888 67788888887433221 12233333 2344555555554433 122 3678899
Q ss_pred CCCHHHHHHHHH
Q 003682 359 PLQFYERIAYYV 370 (803)
Q Consensus 359 ~~~~~~l~aly~ 370 (803)
.++..++..+..
T Consensus 628 ~~~~~qRq~~vd 639 (776)
T KOG0390|consen 628 KTSIKQRQKLVD 639 (776)
T ss_pred CCchHHHHHHHH
Confidence 999999887654
No 403
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=20.35 E-value=1.1e+03 Score=28.98 Aligned_cols=130 Identities=12% Similarity=0.082 Sum_probs=79.7
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCC-CCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNP-SKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p-~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
+..+++.+=|+..-|-....+.=..++.+.-- ++..++.++..|-..-++. .-.++.+.+...+..||.+ ..
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~-~aK~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADY-AAKEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcch-HHHHHHHHHHHHHHhhccc------ce
Confidence 46789999999988876665554444443322 4555666666564332222 2245667778888888763 24
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 429 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l 429 (803)
|+|+.. .+-.--..++.+|||=..+|+ ..+||--. + +|..++ .|.+-+|..-|+--++
T Consensus 559 VvFl~n-YdvslA~~iipa~Dvweqis~------a~~EASGT--s--nMK~al--------NGaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLPN-YDVSLAELLIPAADVWEQIPT------AGKEASGT--S--NMKAAL--------NGALTLGTLDGANVEI 616 (750)
T ss_pred EEEeCC-CChhHHHhhcccccccccCCC------CCccccCc--C--cchHHh--------cCCceeeccccHHHHH
Confidence 667664 444445567899999877776 45664222 1 222222 4678888888876655
No 404
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=20.26 E-value=1e+02 Score=30.84 Aligned_cols=37 Identities=19% Similarity=0.135 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+.+.|+.| ++.|+.++|+||.....+...++.+
T Consensus 83 ~~~g~~~~l~~L-~~~g~~~~i~S~~~~~~~~~~l~~~ 119 (214)
T PRK13288 83 EYETVYETLKTL-KKQGYKLGIVTTKMRDTVEMGLKLT 119 (214)
T ss_pred cCcCHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHc
Confidence 456888999998 7789999999999999888887543
No 405
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=20.12 E-value=93 Score=31.30 Aligned_cols=37 Identities=27% Similarity=0.262 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+.+.|+.| ++.|+.++|+|+.+...+...+..+
T Consensus 88 l~~G~~~~L~~L-~~~g~~~~ivT~~~~~~~~~~l~~~ 124 (220)
T TIGR03351 88 ALPGAEEAFRSL-RSSGIKVALTTGFDRDTAERLLEKL 124 (220)
T ss_pred cCCCHHHHHHHH-HHCCCEEEEEeCCchHHHHHHHHHh
Confidence 456788999998 7789999999999999998888643
No 406
>PLN02954 phosphoserine phosphatase
Probab=20.08 E-value=1.2e+02 Score=30.72 Aligned_cols=37 Identities=24% Similarity=0.246 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+.+.|+.| ++.|+.++|+||.....++.++..+
T Consensus 85 l~pg~~e~l~~l-~~~g~~~~IvS~~~~~~i~~~l~~~ 121 (224)
T PLN02954 85 LSPGIPELVKKL-RARGTDVYLVSGGFRQMIAPVAAIL 121 (224)
T ss_pred CCccHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHHHh
Confidence 346788888887 8889999999999999998888654
Done!