Query 003682
Match_columns 803
No_of_seqs 399 out of 3802
Neff 8.3
Searched_HMMs 29240
Date Tue Mar 26 18:04:22 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003682.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1732-1735//hhsearch_pdb/003682hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t5t_A Putative glycosyltransf 1.0 1 1 839.6 37.1 455 1-491 5-476 (496)
2 1uqt_A Alpha, alpha-trehalose- 1.0 1 1 735.9 37.8 451 1-488 4-454 (482)
3 3fro_A GLGA glycogen synthase; 1.0 1 1 214.4 24.7 312 118-490 99-432 (439)
4 1u02_A Trehalose-6-phosphate p 1.0 1 1 214.1 22.0 222 532-785 1-230 (239)
5 3dao_A Putative phosphatse; st 1.0 1 1 210.9 22.5 229 525-780 14-282 (283)
6 3vue_A GBSS-I, granule-bound s 1.0 1 1 209.8 21.8 294 140-488 154-511 (536)
7 3s28_A Sucrose synthase 1; gly 1.0 1 1 209.6 13.0 309 141-489 409-770 (816)
8 2r60_A Glycosyl transferase, g 1.0 1 1 208.0 15.1 316 126-492 108-463 (499)
9 3pgv_A Haloacid dehalogenase-l 1.0 1 1 207.1 22.7 229 525-781 14-283 (285)
10 3l7y_A Putative uncharacterize 1.0 1 1 205.6 22.2 228 529-783 34-302 (304)
No 1
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=1.00 E-value=1 Score=839.63 Aligned_cols=455 Identities=19% Similarity=0.295 Sum_probs=403.7
Q ss_pred CEEEECCCCCCEEEC-CCCCCCE---EEEECCCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHH----HHH--HHHCC
Q ss_conf 999982685202767-9998884---9983898417864201378996289950497579033567----789--44138
Q 003682 1 MIIVGNQLPLRAHRS-SDGSGGW---TFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDE----VSQ--TLLET 70 (803)
Q Consensus 1 ~ivvs~rlP~~~~~~-~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~----~~~--~~~~~ 70 (803)
||||||||||+++++ ++ |.+ .++.|+|||+++|.+.+ +++||||+|.+.+.+..++ +.. ....+
T Consensus 5 livvsnR~P~~~~~~~~~--g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (496)
T 3t5t_A 5 IFLASKRAAITYDTDPAT--GEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDDRRASALNPDGVTMELHSGRE 78 (496)
T ss_dssp EEEEESCCCEEEEECTTT--CSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHHHHHHHHCTTCEEEECTTSCE
T ss_pred EEEEECCCCEEEEEECCC--CCEEEEEECCCCCCHHHHHHHHC----CCEEEECCCCCCCHHHHHCCCCCCCCCCCCCCC
T ss_conf 899987887068881689--95631133169996299876223----978994178864212333045544555456787
Q ss_pred CEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCCEEEEEC
Q ss_conf 31999637925454352101234645554457889--999888658774999999999999999865199-999689838
Q 003682 71 FKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPL--SPDLGGRFDRSLWQAYVSVNKIFADKVMEVISP-DDDFVWVHD 147 (803)
Q Consensus 71 ~~~~pv~~~~~~~~~~y~~~~~~~lwp~~H~~~~~--~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~~d~vwihD 147 (803)
++|+||+|++++++.||+||||++|||+|||+++. .|.+ .+++.++|++|++||+.||+++.+.+++ ++|+|||||
T Consensus 79 ~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~VwVhD 157 (496)
T 3t5t_A 79 ILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHD 157 (496)
T ss_dssp EEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEEEEES
T ss_pred EEEEEEECCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 57999968999999998774750144012254336778762-11139999999999999999999974468999899947
Q ss_pred CCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCC--CCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHH-CCEECC
Q ss_conf 6433158999850799729989706799936540298--8089999976099880159766998999999871-960225
Q 003682 148 YHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP--IRDELLRALLNADLIGFHTFDYARHFLSCCSRML-GVSYQS 224 (803)
Q Consensus 148 yhl~llp~~lr~~~~~~~i~~f~H~pfP~~~~~~~lp--~~~~ll~~ll~~dligf~~~~~~~~Fl~~~~~~l-g~~~~~ 224 (803)
||||+||+|||+++|+++||||||||||++|+|++|| +|++|++|||+||+||||+++|++||+++|.+++ |..+..
T Consensus 158 YhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~ 237 (496)
T 3t5t_A 158 YQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDR 237 (496)
T ss_dssp GGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEET
T ss_pred CCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 50767899999658998399998489999899965767679999999986999999648999999999999826774245
Q ss_pred CCCEEEEEECCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 67601499869399996822557916899770994389999999998189779994147432348889999999999819
Q 003682 225 KRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQN 304 (803)
Q Consensus 225 ~~~~~~~~~~g~~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~ 304 (803)
..+ .+.++|+.+++.++|+|||++.|.+.... . ..+++++++++++|++|||+++.||+..+|+|| +|++++
T Consensus 238 ~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~~--~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~ 309 (496)
T 3t5t_A 238 EAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNPQ--L---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAARG 309 (496)
T ss_dssp TTT--EEEETTEEEEEEECCCCBCGGGC----CC--C---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHHHT
T ss_pred CCC--EEEECCEEEEEEEECCEECHHHHCHHHHH--H---HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHH-HHHHHC
T ss_conf 687--69989988899981637578994301499--9---999999828963999836676115979999999-998749
Q ss_pred CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCCCC
Q ss_conf 99989578999932899991469999999999999986021999951089961899998999999854323003556678
Q 003682 305 PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGM 384 (803)
Q Consensus 305 p~~~~~v~li~i~~~~~~~~~~~~~l~~~i~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~ 384 (803)
|+++ +++|+|||.|+++++++|+++++++++++++||++||+. +|+++ +.++.+++.++|++||||++||++|||
T Consensus 310 P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~SlrEGf 384 (496)
T 3t5t_A 310 GGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNSTVDGQ 384 (496)
T ss_dssp SSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSSBSC
T ss_pred CCCC-EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC---CEEEE-CCCCHHHHHHHHHHCCEEEECCCCCCC
T ss_conf 6553-389999977777874679999999999999846436886---78994-889999999999856599989551458
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC-CCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 888311345213885322224899999998608962442431238-8980528999899999999993799999999999
Q 003682 385 NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHE 463 (803)
Q Consensus 385 ~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~ 463 (803)
|||++|||||+. ++||+|+|+++|+++++ .+|++|||+|++++|++|.++|+|+++||+.|++
T Consensus 385 gLv~~EamA~~~----------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~ 448 (496)
T 3t5t_A 385 NLSTFEAPLVNE----------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAA 448 (496)
T ss_dssp CSHHHHHHHHCS----------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CHHHHHHHHHCC----------------CCCCEEEECCCCCHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 906999988179----------------9988899679888788679889989999999999999997499999999999
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8602002279779999999999999985
Q 003682 464 KHYRYVSTHDVAYWARSFLQDLERACRD 491 (803)
Q Consensus 464 ~~~~~v~~~~~~~W~~~~l~~l~~~~~~ 491 (803)
++++++.+|++..|+++|+.+|......
T Consensus 449 ~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 449 RRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHCCCC
T ss_conf 9989999789999999999998632410
No 2
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=1.00 E-value=1 Score=735.94 Aligned_cols=451 Identities=30% Similarity=0.569 Sum_probs=409.3
Q ss_pred CEEEECCCCCCEEECCCCCCCEEEEECCCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 99998268520276799988849983898417864201378996289950497579033567789441383199963792
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 ~ivvs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
|||||||+|+. .+ + ..++|||+++|.+.+. +.+++||||+|.. ++ +++.+.+.+..+++|+|||+++
T Consensus 4 livvsnr~p~~----~~----~--~~~~ggl~~~l~~~~~-~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~~ 70 (482)
T 1uqt_A 4 LVVVSNRIAPP----DE----H--AASAGGLAVGILGALK-AAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLSE 70 (482)
T ss_dssp EEEEEEECCCC----C----------CCCHHHHHHHHHHH-HHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEECH
T ss_pred EEEEECCCCCC----CC----C--CCCCCCHHHHHHHHHH-HCCCEEEECCCCC-CC-CCCHHHHHCCCCCEEEEEECCH
T ss_conf 89998898878----89----9--8699858999999985-1797999579998-75-4330234126883499997998
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 54543521012346455544578899998886587749999999999999998651999996898386433158999850
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKR 160 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwihDyhl~llp~~lr~~ 160 (803)
++++.||+||||++|||+|||..+. ..|+.+.|.+|.+||+.||+++.+.+++ +|+|||||||++++|.++|++
T Consensus 71 ~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr~~ 144 (482)
T 1uqt_A 71 QDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRKR 144 (482)
T ss_dssp HHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEECCHHHHHHHHHHHH
T ss_conf 9999999873661044111576775-----5547788999999999999999984488-998999773499999999986
Q ss_pred CCCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCEEEEE
Q ss_conf 79972998970679993654029880899999760998801597669989999998719602256760149986939999
Q 003682 161 FNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240 (803)
Q Consensus 161 ~~~~~i~~f~H~pfP~~~~~~~lp~~~~ll~~ll~~dligf~~~~~~~~Fl~~~~~~lg~~~~~~~~~~~~~~~g~~~~i 240 (803)
.++++|+||+|+|||++++|+++|++++++++++++|+++||+++|+++|+++|+++++.+..... .+.+.|+.+++
T Consensus 145 ~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~---~~~~~g~~~~v 221 (482)
T 1uqt_A 145 GVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAFRT 221 (482)
T ss_dssp TCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEEEE
T ss_pred CCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCC---EEEECCEEEEE
T ss_conf 899968999858999889985486379999766316867887799999999999987187132587---48988927899
Q ss_pred EEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 68225579168997709943899999999981897799941474323488899999999998199998957899993289
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA 320 (803)
Q Consensus 241 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~~~~ 320 (803)
.++|+|||++.|.+....++... ...++++++++++|++|||+++.||+..+|+||+++++++|+++++++|+|+|.|+
T Consensus 222 ~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~ 300 (482)
T 1uqt_A 222 EVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS 300 (482)
T ss_dssp EECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBC
T ss_pred EEEECCCCHHHHHHHHCCCCHHH-HHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
T ss_conf 99846679799997742832479-99999985898799997377365798999999999998691302747999997887
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 99914699999999999999860219999510899618999989999998543230035566788883113452138853
Q 003682 321 RGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 400 (803)
Q Consensus 321 ~~~~~~~~~l~~~i~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~ 400 (803)
++++++++++++++++++++||.++|+.+|.||+++.+.++++++.++|++|||||+||++||||||++|||||+.+
T Consensus 301 ~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~--- 377 (482)
T 1uqt_A 301 RGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP--- 377 (482)
T ss_dssp STTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT---
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHCCC---
T ss_conf 65527799999999999999754326678740899579899999999999705999897735588269999991888---
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 22224899999998608962442431238898052899989999999999379999999999986020022797799999
Q 003682 401 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480 (803)
Q Consensus 401 ~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~ 480 (803)
.++||+|+|+++|+++++.+|++|||+|++++|++|.++|+|++++++.+++++++++.++++..|+++
T Consensus 378 -----------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~ 446 (482)
T 1uqt_A 378 -----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 446 (482)
T ss_dssp -----------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred -----------CCCCCEEEECCCCCHHHHCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf -----------889888997898987995881898989999999999999819999999999998899996899999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q 003682 481 FLQDLERA 488 (803)
Q Consensus 481 ~l~~l~~~ 488 (803)
|++.|.++
T Consensus 447 ~l~~l~~~ 454 (482)
T 1uqt_A 447 FISDLKQI 454 (482)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHC
T ss_conf 99999844
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=214.43 Aligned_cols=312 Identities=16% Similarity=0.156 Sum_probs=228.9
Q ss_pred HHHHHHHHHHHHHHHHHH----CCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCH---HHHH--------C
Q ss_conf 999999999999999865----199999689838643315899985079972998970679993---6540--------2
Q 003682 118 WQAYVSVNKIFADKVMEV----ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYR--------T 182 (803)
Q Consensus 118 w~~Y~~vN~~fa~~i~~~----~~~~~d~vwihDyhl~llp~~lr~~~~~~~i~~f~H~pfP~~---~~~~--------~ 182 (803)
+..+..+.+.....+... .+| |+|++|+++..+++.++++. .+.|+.+.+|..++.. ..+. .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~ 175 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLP--DVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP 175 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCC--SEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC--EEEEECCHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 2325789999999999974447998--19994640343458988652-69978999653444568567747455100356
Q ss_pred CCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHCCCHHH
Q ss_conf 98808999997609988015976699899999987196022567601499869399996822557916899770994389
Q 003682 183 LPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETE 262 (803)
Q Consensus 183 lp~~~~ll~~ll~~dligf~~~~~~~~Fl~~~~~~lg~~~~~~~~~~~~~~~g~~~~i~v~p~GId~~~~~~~~~~~~~~ 262 (803)
.....-....+-.+|.+...+..+.+.... .++. ...++.++|+|+|.+.|.+....+...
T Consensus 176 ~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~---------------~~~~i~vi~ngvd~~~~~~~~~~~~~~ 236 (439)
T 3fro_A 176 YPDIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRD 236 (439)
T ss_dssp SSEECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG---------------GTTSEEECCCCCCTTTSCGGGSCSCHH
T ss_pred CCEEEHHHHHHHHCCEEEECCHHHHHHHHH----HHHH---------------CCCCEEECCCCCCCHHCCCCCCCCHHH
T ss_conf 663207666554345887268989999860----5650---------------477345347888804308432211045
Q ss_pred HHHHHHHHHH--CCCEEEEEECCCC-CCCCHHHHHHHHHHHHHHC--CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999981--8977999414743-2348889999999999819--999895789999328999914699999999999
Q 003682 263 AKVAELQDQF--KGQIVMLGVDDMD-IFKGISLKLLAMEQLLSQN--PSKRGKIVLVQIANPARGRGRDVQEVQSETHAT 337 (803)
Q Consensus 263 ~~~~~l~~~~--~~~~iil~v~Rl~-~~Kgi~~~l~A~~~ll~~~--p~~~~~v~li~i~~~~~~~~~~~~~l~~~i~~l 337 (803)
.....+++++ .++++|+++||+. +.||+..+++|++.+.+++ |+ +.|+++|.+ +. .+...++++
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g-----~~--~~~~~l~~~ 305 (439)
T 3fro_A 237 ERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG-----DP--ELEGWARSL 305 (439)
T ss_dssp HHHHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCC-----CH--HHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCC----EEEEEECCC-----CH--HHHHHHHHH
T ss_conf 6699999973999984799973335343669999999999985466787----189998079-----72--677899998
Q ss_pred HHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 99986021999951089961899998999999854323003556678888311345213885322224899999998608
Q 003682 338 VRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSML 417 (803)
Q Consensus 338 v~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~v 417 (803)
+.+. + .++.+.|.++.+++..+|+.||++++||..||||++.+|||+| |.|+
T Consensus 306 ~~~~-------~--~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~-------------------G~Pv 357 (439)
T 3fro_A 306 EEKH-------G--NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------------------GAIP 357 (439)
T ss_dssp HHHC-------T--TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHT-------------------TCEE
T ss_pred HHHC-------C--CEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHC-------------------CCCE
T ss_conf 7506-------9--8999728799889999999779999589878861899999977-------------------9976
Q ss_pred EECCCCCCCCCC--CCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 962442431238--8980528999899999999993799999999999860200227977999999999999998
Q 003682 418 VVSEFVGCSPSL--SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACR 490 (803)
Q Consensus 418 V~S~~~G~~~~l--~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~ 490 (803)
|+|+.+|..+.+ ..|++++|.|+++++++|.+++.++++.+....+..++++..+++..+++++++.++++.+
T Consensus 358 i~s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 358 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp EEESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred EECCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 973788743168758448968899899999999998319999999999999987647299999999999999997
No 4
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=1.00 E-value=1 Score=214.06 Aligned_cols=222 Identities=20% Similarity=0.293 Sum_probs=162.5
Q ss_pred CEEEEEECCCCCCCCCC--CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEECCCE
Q ss_conf 95999943886789999--9999998999999997318998399995899654999862278971781185899938942
Q 003682 532 NRAILLDYDGTIMVPGS--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGV 609 (803)
Q Consensus 532 ~klii~DlDGTL~~~~~--~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~~l~liaenG~~i~~~~~~ 609 (803)
+|+|++|+||||++... ....+++.++++|++| ++.| .|+++|||+...+.+++..+ .+++++||++++..+..
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l-~~~g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~~~~ 76 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KERF-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKINGQI 76 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HHHS-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEETTEE
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH-HCCC-CEEEEECCCHHHHHHHHCCC--HHEEEECCEEEEECCEE
T ss_conf 96999915887768988945577897899999998-3499-99999498999999986012--24078878899618824
Q ss_pred EEEEECCCCCCCHH-HHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCE
Q ss_conf 27860688880189-99999999984059972584134328974104797611344999999999986189909988790
Q 003682 610 DWETCVSVPDFSWK-QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPN 688 (803)
Q Consensus 610 ~~~~~~~~~~~~~~-~~~~~il~~~~~~~~gs~ie~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~~~v~~g~~ 688 (803)
.|... ......+. +.+..+++.. ...++.+++.+...+.++|+..++ +.....+.+.+.+.+. . .+.+.++..
T Consensus 77 ~~~~~-~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~--~~~~~~~~~ 150 (239)
T 1u02_A 77 VYNNG-SDRFLGVFDRIYEDTRSWV-SDFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI-F--GVETYYGKM 150 (239)
T ss_dssp EECTT-GGGGHHHHHHHHHHHTTHH-HHSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH-H--TCEEEECSS
T ss_pred EECCC-CCCCCHHHHHHHHHHHHHH-HHCCCCEEEECCCEEEEECCCCCH-HHHHHHHHHHHHHHCC-C--CCEEEECCC
T ss_conf 30345-4234125699999999998-318994899528889998288986-5899999999987405-8--958993776
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHC--CHHCCCCCCCCCCCEEEEEECCCCCCCEEE
Q ss_conf 999993999999999999997544799946299990990039999980--240289999998505899927988624068
Q 003682 689 IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI--KSAAAGPSLSPVAEVFACTVGQKPSKAKYY 766 (803)
Q Consensus 689 ~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~--~~~~a~~~~~~~~~~~~V~vG~~~s~A~~~ 766 (803)
++||.|+++|||.|++++++++ + +++|||+.||++||+.+ + ++|+||++++.|+|+
T Consensus 151 ~lei~~~~~~Kg~al~~l~~~~---g-----via~GD~~ND~~Ml~~a~~g--------------~~vam~Na~~~A~~v 208 (239)
T 1u02_A 151 IIELRVPGVNKGSAIRSVRGER---P-----AIIAGDDATDEAAFEANDDA--------------LTIKVGEGETHAKFH 208 (239)
T ss_dssp EEEEECTTCCHHHHHHHHHTTS---C-----EEEEESSHHHHHHHHTTTTS--------------EEEEESSSCCCCSEE
T ss_pred EEEEECCCCCHHHHHHHHHHHC---C-----EEEEECCCCCHHHHHHHHCC--------------CEEEECCCCCCCEEE
T ss_conf 8999869998899999998638---8-----49995887569999975288--------------189989988744189
Q ss_pred ECC---HHHHHHHHHHHHHHHC
Q ss_conf 099---7599999999897302
Q 003682 767 LDD---TAEILRMLLGLAEASA 785 (803)
Q Consensus 767 i~~---~~ev~~~L~~l~~~~~ 785 (803)
+.+ .++|.++|+++.....
T Consensus 209 ~~~~~~~~gV~~~l~~~~~~~~ 230 (239)
T 1u02_A 209 VADYIEMRKILKFIEMLGVQKK 230 (239)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCCCHHHHHHHHHHHHHHCC
T ss_conf 6898878999999999998534
No 5
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=1.00 E-value=1 Score=210.93 Aligned_cols=229 Identities=19% Similarity=0.213 Sum_probs=162.6
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCC-CCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC-CCCEEECCCEE
Q ss_conf 999815995999943886789999999-9998999999997318998399995899654999862278-97178118589
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPGSIST-SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYF 602 (803)
Q Consensus 525 ~~y~~~~~klii~DlDGTL~~~~~~~~-~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~-~l~liaenG~~ 602 (803)
+.|..+++|+|+||+||||++ +.. .+++.++++|+++ ++.|+.|+++|||+...+.+++..+. ..++++.||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRL-IDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred HHHHCCCCEEEEEECCCCCCC---CCCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCE
T ss_conf 234305830999927577888---99883898899999999-97879899991898899999999718884899889739
Q ss_pred EEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCC----------CCEEEECCC----------EEEEE----ECCCC-
Q ss_conf 993894227860688880189999999999840599----------725841343----------28974----10479-
Q 003682 603 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTD----------GSTIETKES----------ALVWN----FQYAD- 657 (803)
Q Consensus 603 i~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~----------gs~ie~k~~----------~~~~~----~~~~d- 657 (803)
+...+...+...+ +. +.+.++++.+.+..+ +.|...... ..... +....
T Consensus 90 i~~~~~~i~~~~l---~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 163 (283)
T 3dao_A 90 VRTPKEILKTYPM---DE---DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDR 163 (283)
T ss_dssp EECSSCEEEECCC---CH---HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCC
T ss_pred EEECCEEEEEECC---CH---HHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCEECCCHHHCCC
T ss_conf 9999999999527---99---99999999999856994599994880898179879999998761588668289778484
Q ss_pred CC------C-CHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH
Q ss_conf 76------1-1344999999999986189909988790999993999999999999997544799946299990990039
Q 003682 658 PD------F-GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDE 730 (803)
Q Consensus 658 ~~------~-~~~~a~~l~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~ 730 (803)
.. + ......++.+.+.+.+.+....+.++..++|+.|++++||.+++++++++ |++++++++|||+.||+
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~l---gi~~~e~ia~GD~~NDi 240 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRF---DLLPDEVCCFGDNLNDI 240 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEECSGGGH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHH---CCCHHHEEEECCCHHHH
T ss_conf 683499998581778999999999836977999926965999608994799999999983---98989989987977789
Q ss_pred HHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEEEECC--HHHHHHHHHHH
Q ss_conf 99998024028999999850589992798----8624068099--75999999998
Q 003682 731 DMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGL 780 (803)
Q Consensus 731 ~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~~--~~ev~~~L~~l 780 (803)
+||+.+|. +|+||++ +..|+|++.+ .++|.+.|+++
T Consensus 241 ~ml~~ag~--------------~vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 241 EMLQNAGI--------------SYAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp HHHHHSSE--------------EEEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred HHHHHCCC--------------EEECCCCCHHHHHHCCEECCCCCCCHHHHHHHHH
T ss_conf 99985798--------------8876899899998368577889977599999975
No 6
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=209.77 Aligned_cols=294 Identities=15% Similarity=0.140 Sum_probs=197.4
Q ss_pred CCEEEEECCCCCCHHHHHHHHC------CCCEEEEEEECCCCC----HHHHHC--CCC--------------------CH
Q ss_conf 9968983864331589998507------997299897067999----365402--988--------------------08
Q 003682 140 DDFVWVHDYHLMVLPTFLRKRF------NRVKLGFFLHSPFPS----SEIYRT--LPI--------------------RD 187 (803)
Q Consensus 140 ~d~vwihDyhl~llp~~lr~~~------~~~~i~~f~H~pfP~----~~~~~~--lp~--------------------~~ 187 (803)
+|++++||.|-.++|.+++... .+.++.|+.|..-.. .+.+.. ++. -.
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCCCCCCCCCHH
T ss_conf 87999776048999999998640233202563454215742245555333644189656401033331146410033043
Q ss_pred HHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHCC--------C
Q ss_conf 99999760998801597669989999998719602256760149986939999682255791689977099--------4
Q 003682 188 ELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL--------P 259 (803)
Q Consensus 188 ~ll~~ll~~dligf~~~~~~~~Fl~~~~~~lg~~~~~~~~~~~~~~~g~~~~i~v~p~GId~~~~~~~~~~--------~ 259 (803)
-+-.++..+|.|..-++.|++..++. .+. | .......+..++.++|+|||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~----~~~------g-~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISG----IAR------G-CELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTT----CCC------C-SSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHHCCEEEECCHHHHHHHHCC----CCC------C-CCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHH
T ss_conf 99999985367787687885343126----344------5-220012545781899799664214887762100144434
Q ss_pred H---HH-HHHHHHHHHH-----CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHH
Q ss_conf 3---89-9999999981-----8977999414743234888999999999981999989578999932899991469999
Q 003682 260 E---TE-AKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEV 330 (803)
Q Consensus 260 ~---~~-~~~~~l~~~~-----~~~~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~~~~~~~~~~~~~l 330 (803)
. .+ .....+++.+ ++.++|++|||+++.||+..+++|+.+++++.+ .|+++|.+ + +. .
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G---~-~~---~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTG---K-KK---F 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCB---C-HH---H
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCC------EEEEEECC---C-CH---H
T ss_conf 5556567779999986199879997589999653023784789999997685498------59999546---7-26---8
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf 99999999998602199995108996189999899999985432300355667888831134521388532222489999
Q 003682 331 QSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPS 410 (803)
Q Consensus 331 ~~~i~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~ 410 (803)
...+..+...... .+ .+.+..+.+++..+|+.||+||+||.+||||++.+|||+|
T Consensus 370 ~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~---------------- 424 (536)
T 3vue_A 370 EKLLKSMEEKYPG--------KV-RAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRY---------------- 424 (536)
T ss_dssp HHHHHHHHHHSTT--------TE-EEECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHT----------------
T ss_pred HHHHHHHHHHCCC--------CE-EEEEECCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHC----------------
T ss_conf 9999998761688--------54-9997146888999998623425346568988899999986----------------
Q ss_pred CCCCCEEEECCCCCCCCCCCC---C----------CEECCCCHHHHHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 999860896244243123889---8----------05289998999999999937--99999999999860200227977
Q 003682 411 TAKSSMLVVSEFVGCSPSLSG---A----------IRVNPWNIDAVAEAMDSALG--VSDAEKQMRHEKHYRYVSTHDVA 475 (803)
Q Consensus 411 ~~~~g~vV~S~~~G~~~~l~~---~----------~lvnP~d~~~~a~ai~~aL~--~~~~er~~r~~~~~~~v~~~~~~ 475 (803)
|.|+|+|+.+|..+.+.+ | .+|+|.|+++++++|.++|. ..+..++.+.+.+ .+.++|.
T Consensus 425 ---G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~am---~~~fSW~ 498 (536)
T 3vue_A 425 ---GTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNCM---NQDLSWK 498 (536)
T ss_dssp ---TCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHH---HSCCSSH
T ss_pred ---CCCEEECCCCCCHHEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH---HHCCCHH
T ss_conf ---9989990799822202279876324667775158799999999999999998529599999999987---7359999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q 003682 476 YWARSFLQDLERA 488 (803)
Q Consensus 476 ~W~~~~l~~l~~~ 488 (803)
.-++++.+.+.+.
T Consensus 499 ~~A~~y~~ly~~L 511 (536)
T 3vue_A 499 GPAKNWENVLLGL 511 (536)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999986
No 7
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=209.60 Aligned_cols=309 Identities=12% Similarity=0.113 Sum_probs=204.8
Q ss_pred CEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCHHH-------------HHHHHCCCEEECCCHHHH
Q ss_conf 9689838643315899985079972998970679993654029880899-------------999760998801597669
Q 003682 141 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDEL-------------LRALLNADLIGFHTFDYA 207 (803)
Q Consensus 141 d~vwihDyhl~llp~~lr~~~~~~~i~~f~H~pfP~~~~~~~lp~~~~l-------------l~~ll~~dligf~~~~~~ 207 (803)
|+|+.|.....+++.+++++. ++|+.+..|...+......-..+ ..+ ...+-.+|.|...++...
T Consensus 409 DVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~ 486 (816)
T 3s28_A 409 DLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEI 486 (816)
T ss_dssp SEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHH
T ss_conf 399968853899999999975-99889998166300122233015-5677888898888899999984999998889999
Q ss_pred HHHHHHHHHHHCCEECCC-----CCEE----EEEECCEEEEEEEECCCCCHHHHHHHHCCCH----HHHHHHHH------
Q ss_conf 989999998719602256-----7601----4998693999968225579168997709943----89999999------
Q 003682 208 RHFLSCCSRMLGVSYQSK-----RGYI----GLEYFGRTVSIKILPVGIHIGQLQSVLNLPE----TEAKVAEL------ 268 (803)
Q Consensus 208 ~~Fl~~~~~~lg~~~~~~-----~~~~----~~~~~g~~~~i~v~p~GId~~~~~~~~~~~~----~~~~~~~l------ 268 (803)
+....... .+... .+.. ++..... ++.++|+|||.+.|.+...... ........
T Consensus 487 ~~l~~~~~-----~y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~ 559 (816)
T 3s28_A 487 AGSKETVG-----QYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVE 559 (816)
T ss_dssp HCCSSSCC-----TTGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCC
T ss_pred HHHHHHHH-----HHHHHHCCCCCHHHHCCCCCCCCCC--CEEEECCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 99998887-----7644201354112210122446778--8799889747887286310355432002320001246056
Q ss_pred -HHH-----HCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC--CCCCHHHHHHHHHHHHHHHH
Q ss_conf -998-----1897799941474323488899999999998199998957899993289--99914699999999999999
Q 003682 269 -QDQ-----FKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA--RGRGRDVQEVQSETHATVRR 340 (803)
Q Consensus 269 -~~~-----~~~~~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~~~~--~~~~~~~~~l~~~i~~lv~~ 340 (803)
++. ..++++|+++||+++.||+..+++|+..+.+.+|+++ |+++|.+. .....+..+...++.+++.+
T Consensus 560 ~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~~ 635 (816)
T 3s28_A 560 NKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIEE 635 (816)
T ss_dssp BTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEE----EEEEECCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 7777444578998399997447221799999999999785579969----999968875333433569999999999997
Q ss_pred HHCCCCCCCCCCEEEECC----CCCHHHHHHHHH-HCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 860219999510899618----999989999998-543230035566788883113452138853222248999999986
Q 003682 341 INKIFGRPGYQPVVLIDT----PLQFYERIAYYV-IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSS 415 (803)
Q Consensus 341 in~~~~~~~~~~v~~~~~----~~~~~~l~aly~-~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g 415 (803)
. +....+.+.| .++.+++..+|+ +||+|++||..||||++++|||+| |.
T Consensus 636 l-------gL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~-------------------G~ 689 (816)
T 3s28_A 636 Y-------KLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC-------------------GL 689 (816)
T ss_dssp T-------TCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT-------------------TC
T ss_pred C-------CCCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHC-------------------CC
T ss_conf 4-------998728981675566899999999995690999888755764999999980-------------------99
Q ss_pred EEEECCCCCCCCCCC---CCCEECCCCHHHHHHHHHHHH----CCCHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHH
Q ss_conf 089624424312388---980528999899999999993----799999999999860200-227977999999999999
Q 003682 416 MLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSAL----GVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 487 (803)
Q Consensus 416 ~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL----~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 487 (803)
|+|+|+.+|..+.+. +|++|+|.|++++|++|.+++ ..+ +.+....++.++++ ..++|..+++++++.+..
T Consensus 690 PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 690 PTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp CEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred CEEEECCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 9999689876999706981899689999999999999998752699-999999999999999868999999999999999
Q ss_pred HH
Q ss_conf 99
Q 003682 488 AC 489 (803)
Q Consensus 488 ~~ 489 (803)
..
T Consensus 769 ~g 770 (816)
T 3s28_A 769 YG 770 (816)
T ss_dssp HH
T ss_pred HH
T ss_conf 76
No 8
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=207.99 Aligned_cols=316 Identities=14% Similarity=0.049 Sum_probs=212.0
Q ss_pred HHHHHHHHHH-CCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHH-HHCC----C---------CCHHH-
Q ss_conf 9999999865-19999968983864331589998507997299897067999365-4029----8---------80899-
Q 003682 126 KIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI-YRTL----P---------IRDEL- 189 (803)
Q Consensus 126 ~~fa~~i~~~-~~~~~d~vwihDyhl~llp~~lr~~~~~~~i~~f~H~pfP~~~~-~~~l----p---------~~~~l- 189 (803)
..+.+.+.+. .+| |+|++|.+...+++.++.+. .+.|+.+..|..++.... +... | .+..+
T Consensus 108 ~~l~~~l~~~~~~~--Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (499)
T 2r60_A 108 NKIINFYREEGKFP--QVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAE 184 (499)
T ss_dssp HHHHHHHHHHTCCC--SEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHCCCCC--CEEEECCCCCHHHHHHHHHH-CCCCEEEECCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999998538998--88997578620799998873-5996899806840011134414787761245567888999999
Q ss_pred HHHHHCCCEEECCCHHHHHHHHHHHHHHHC-CEECCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 999760998801597669989999998719-6022567601499869399996822557916899770994389999999
Q 003682 190 LRALLNADLIGFHTFDYARHFLSCCSRMLG-VSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAEL 268 (803)
Q Consensus 190 l~~ll~~dligf~~~~~~~~Fl~~~~~~lg-~~~~~~~~~~~~~~~g~~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l 268 (803)
...+-.+|.+.+.+....+.+... ...| +.. .....++.++|+|+|.+.|.+... . .....+
T Consensus 185 ~~~~~~ad~vi~~S~~~~~~~~~~--~~~g~~~~-----------~~~~~ki~vi~ngvd~~~~~~~~~---~-~~~~~~ 247 (499)
T 2r60_A 185 RLTMSYADKIIVSTSQERFGQYSH--DLYRGAVN-----------VEDDDKFSVIPPGVNTRVFDGEYG---D-KIKAKI 247 (499)
T ss_dssp HHHHHHCSEEEESSHHHHHHTTTS--GGGTTTCC-----------TTCGGGEEECCCCBCTTTSSSCCC---H-HHHHHH
T ss_pred HHHHHCCCEEEECCHHHHHHHHHH--HCCCCCCC-----------CCCCCCEEEECCCCCHHHCCCCCH---H-HHHHHH
T ss_conf 999846899998888999999864--12464223-----------467887699879958665686410---3-567899
Q ss_pred HHHH--------CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC----C---HHHHHHHHH
Q ss_conf 9981--------897799941474323488899999999998199998957899993289999----1---469999999
Q 003682 269 QDQF--------KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGR----G---RDVQEVQSE 333 (803)
Q Consensus 269 ~~~~--------~~~~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~~~~~~~----~---~~~~~l~~~ 333 (803)
++++ .++++|+++||+++.||+..+++|+..+.+++|+. +.|+++|... +. + ....++.++
T Consensus 248 r~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~ 323 (499)
T 2r60_A 248 TKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGK 323 (499)
T ss_dssp HHHHHHHSCGGGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC---EEEEEECCCC-CCCCCCCCCCCCCHHHHHH
T ss_conf 98836433456888768999606850158899999999998738886---5999987888-7532211113201479999
Q ss_pred HHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHC----CCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
Q ss_conf 999999986021999951089961899998999999854----3230035566788883113452138853222248999
Q 003682 334 THATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA----ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDP 409 (803)
Q Consensus 334 i~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~a----dv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~ 409 (803)
+++++.+. +..+.+.+.|.++.+++..+|+.| |++++||..||||++++|||+|
T Consensus 324 l~~~~~~~-------~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~--------------- 381 (499)
T 2r60_A 324 IIELIDNN-------DCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMAS--------------- 381 (499)
T ss_dssp HHHHHHHT-------TCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHT---------------
T ss_pred HHHHHHHC-------CCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHC---------------
T ss_conf 99999864-------99860998788998999999995576798899786458979689999976---------------
Q ss_pred CCCCCCEEEECCCCCCCCCCC---CCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHH
Q ss_conf 999986089624424312388---98052899989999999999379999999999986020022-79779999999999
Q 003682 410 STAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQDL 485 (803)
Q Consensus 410 ~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l 485 (803)
|.|+|+|+.+|..+.+. .|++++|.|+++++++|.+++.. ++.+....++.++++.+ +++..+++.+++.+
T Consensus 382 ----G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y 456 (499)
T 2r60_A 382 ----GLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVI 456 (499)
T ss_dssp ----TCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHH
T ss_pred ----CCCEEEECCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf ----9988981688778873478607995899999999999999869-99999999999999987579999999999999
Q ss_pred HHHHHHH
Q ss_conf 9999850
Q 003682 486 ERACRDH 492 (803)
Q Consensus 486 ~~~~~~~ 492 (803)
.++....
T Consensus 457 ~~~~~~~ 463 (499)
T 2r60_A 457 QEIADRK 463 (499)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
T ss_conf 9987321
No 9
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=1.00 E-value=1 Score=207.14 Aligned_cols=229 Identities=14% Similarity=0.162 Sum_probs=159.6
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC-CCCEEECCCEEE
Q ss_conf 9998159959999438867899999999998999999997318998399995899654999862278-971781185899
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFV 603 (803)
Q Consensus 525 ~~y~~~~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~-~l~liaenG~~i 603 (803)
.+|..+++|+|+||+||||++ +...+++.+.++|+++ +++|+.|+++|||+...+.+++..+. ...+++.||+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i 89 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLL-TARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARV 89 (285)
T ss_dssp -------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEE
T ss_pred CCCCCCCCEEEEEECCCCCCC---CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEECCCEEE
T ss_conf 120067531999957687899---8995798899999999-978999999848987999999996499851998287089
Q ss_pred EECCCEE-EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEE--EECCCEE--------EE-------EEC--CCC----CC
Q ss_conf 9389422-78606888801899999999998405997258--4134328--------97-------410--479----76
Q 003682 604 RPNYGVD-WETCVSVPDFSWKQIAEPVMKLYTETTDGSTI--ETKESAL--------VW-------NFQ--YAD----PD 659 (803)
Q Consensus 604 ~~~~~~~-~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~i--e~k~~~~--------~~-------~~~--~~d----~~ 659 (803)
....+.. +...+ . .+.+..+++.+... .+..+ ....... .. .+. ... ..
T Consensus 90 ~~~~~~~l~~~~l---~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (285)
T 3pgv_A 90 HDSDGQQIFAHNL---D---RDIAADLFEIVRND-PKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQG 162 (285)
T ss_dssp ECTTSCEEEECCC---C---HHHHHHHTTTTTTC-TTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSS
T ss_pred ECCCCCEEEECCC---C---HHHHHHHHHHHHHC-CCEEEEEECCCCEEECCCCHHHHHHHHHCCCCCEEECHHHCCCCC
T ss_conf 9899989986689---9---99999999988633-996899980891897489889998877507861774689937788
Q ss_pred --------CCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHH
Q ss_conf --------113449999999999861899099887909999939999999999999975447999462999909900399
Q 003682 660 --------FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDED 731 (803)
Q Consensus 660 --------~~~~~a~~l~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~ 731 (803)
.......++.+.+.+.+......+.++..++|+.|++++||.+++++++++ |++++++++|||+.||++
T Consensus 163 i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~~~ia~GD~~NDi~ 239 (285)
T 3pgv_A 163 ISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKML---GYTLSDCIAFGDGMNDAE 239 (285)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHH---CCCHHHEEEECCCHHHHH
T ss_conf 60899967999999999999998746878999837954998539998699999999981---999899899779675699
Q ss_pred HHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEE--EE--CCHHHHHHHHHHHH
Q ss_conf 9998024028999999850589992798----862406--80--99759999999989
Q 003682 732 MFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY--YL--DDTAEILRMLLGLA 781 (803)
Q Consensus 732 Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~--~i--~~~~ev~~~L~~l~ 781 (803)
||+.+|. +|+||++ +..|++ ++ ++.++|++.|+++.
T Consensus 240 ml~~ag~--------------~vAm~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 240 MLSMAGK--------------GCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp HHHHSSE--------------EEECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred HHHHCCC--------------EEECCCCCHHHHHHCCCCEECCCCCCCHHHHHHHHHH
T ss_conf 9986197--------------7773689899997578888645677665999999984
No 10
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=1.00 E-value=1 Score=205.55 Aligned_cols=228 Identities=17% Similarity=0.259 Sum_probs=159.8
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCCCCHH-HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC-CCCEEECCCEEEEEC
Q ss_conf 1599599994388678999999999989-99999997318998399995899654999862278-971781185899938
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAE-AVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN 606 (803)
Q Consensus 529 ~~~~klii~DlDGTL~~~~~~~~~i~~~-~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~-~l~liaenG~~i~~~ 606 (803)
.|++|+|+||+||||++ +...+++. +.++|+++ ++.|+.|+++|||+...+.+++..+. ..+++++||+.+...
T Consensus 34 ~M~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~ 109 (304)
T 3l7y_A 34 SMSVKVIATDMDGTFLN---SKGSYDHNRFQRILKQL-QERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISK 109 (304)
T ss_dssp --CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEET
T ss_pred CEEEEEEEEECCCCCCC---CCCCCCHHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCEEEEC
T ss_conf 63468999967788899---89851979999999999-988998999808987999999987077771891797399989
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCE--EEECCCEEEE----------------------EECCC-CCC--
Q ss_conf 94227860688880189999999999840599725--8413432897----------------------41047-976--
Q 003682 607 YGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGST--IETKESALVW----------------------NFQYA-DPD-- 659 (803)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~--ie~k~~~~~~----------------------~~~~~-d~~-- 659 (803)
+...+...+ +. +.+.++++.+.+..++.. +......... .+... ...
T Consensus 110 ~~~i~~~~l---~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 183 (304)
T 3l7y_A 110 NQSLIEVFQ---QR---EDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFF 183 (304)
T ss_dssp TEEEEECCC---CH---HHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEE
T ss_pred CEEEEEECC---CH---HHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHCCCEECCCHHHCCCCCEE
T ss_conf 989998438---99---999999999997569837999859987653778989999999872256464898790838759
Q ss_pred -----CCHHHHHHHHHHHHHHHCC-CCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH
Q ss_conf -----1134499999999998618-9909988790999993999999999999997544799946299990990039999
Q 003682 660 -----FGSCQAKELLDHLESVLAN-EPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMF 733 (803)
Q Consensus 660 -----~~~~~a~~l~~~l~~~l~~-~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf 733 (803)
.......++.+.+.+.+.+ ....+.++..++|+.|++++||.+++++++++ |++++++++|||+.||++|+
T Consensus 184 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~l---gi~~~e~i~~GDs~NDi~m~ 260 (304)
T 3l7y_A 184 KLTLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRW---NFTSDHLMAFGDGGNDIEML 260 (304)
T ss_dssp EEEEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHH---CCCHHHEEEECCCHHHHHHH
T ss_conf 999983778799999999976689739999728964999708997999999999995---96989989987978889999
Q ss_pred HHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEEEECC--HHHHHHHHHHHHHH
Q ss_conf 98024028999999850589992798----8624068099--75999999998973
Q 003682 734 EVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLAEA 783 (803)
Q Consensus 734 ~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~~--~~ev~~~L~~l~~~ 783 (803)
+.+|. +|++|++ +..|+|++.+ .++|++.|+++...
T Consensus 261 ~~ag~--------------~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~ 302 (304)
T 3l7y_A 261 KLAKY--------------SYAMANAPKNVKAAANYQAKSNDESGVLDVIDNYLAS 302 (304)
T ss_dssp HHCTE--------------EEECTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC
T ss_pred HHCCC--------------EEECCCCCHHHHHHCCEECCCCCCCHHHHHHHHHHHH
T ss_conf 86697--------------3775896898997345776879712599999999974
Done!