Query 003685
Match_columns 803
No_of_seqs 209 out of 681
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 04:05:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003685.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003685hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02337 lipoxygenase 100.0 1E-235 2E-240 2026.7 71.1 799 5-803 68-866 (866)
2 PLN02305 lipoxygenase 100.0 8E-234 2E-238 2001.7 70.9 783 6-803 130-918 (918)
3 PLN02264 lipoxygenase 100.0 1E-232 3E-237 1991.8 67.7 783 6-803 133-919 (919)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 5E-192 1E-196 1662.9 36.6 665 108-782 1-667 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 99.9 6.1E-22 1.3E-26 190.2 9.5 90 6-99 48-137 (137)
6 smart00308 LH2 Lipoxygenase ho 99.1 2.8E-10 6.2E-15 104.7 9.3 70 11-86 34-104 (105)
7 PF01477 PLAT: PLAT/LH2 domain 99.0 5.6E-10 1.2E-14 103.3 8.0 67 29-97 44-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.9 7.2E-09 1.6E-13 97.0 9.2 68 27-96 45-115 (116)
9 cd01753 PLAT_LOX PLAT domain o 98.8 1.8E-08 3.9E-13 94.7 8.3 75 11-90 31-108 (113)
10 cd02899 PLAT_SR Scavenger rece 98.7 2.6E-08 5.6E-13 92.9 7.7 56 27-86 42-98 (109)
11 cd01756 PLAT_repeat PLAT/LH2 d 98.5 5.5E-07 1.2E-11 85.4 9.9 82 11-97 31-118 (120)
12 cd01754 PLAT_plant_stress PLAT 98.4 1.3E-06 2.9E-11 83.9 8.9 61 27-89 53-119 (129)
13 cd01752 PLAT_polycystin PLAT/L 98.4 1.7E-06 3.7E-11 82.1 9.2 82 11-96 31-117 (120)
14 cd01757 PLAT_RAB6IP1 PLAT/LH2 98.1 1.1E-05 2.4E-10 76.0 7.5 48 41-88 49-99 (114)
15 cd01755 PLAT_lipase PLAT/ LH2 75.9 11 0.00024 35.8 7.6 53 27-82 43-105 (120)
16 PF06232 ATS3: Embryo-specific 55.9 31 0.00066 33.5 6.1 56 28-87 62-117 (125)
17 KOG2080 Uncharacterized conser 51.6 6.4 0.00014 48.2 0.9 58 30-90 1011-1071(1295)
18 cd01758 PLAT_LPL PLAT/ LH2 dom 37.2 1.1E+02 0.0023 30.2 6.7 52 28-82 46-119 (137)
19 PF10474 DUF2451: Protein of u 32.0 36 0.00077 36.4 2.8 24 582-611 178-201 (234)
20 KOG2675 Adenylate cyclase-asso 30.2 1.7E+02 0.0036 34.1 7.6 111 468-622 91-216 (480)
21 PF12588 PSDC: Phophatidylseri 24.8 1.2E+02 0.0026 30.0 4.8 127 597-742 10-139 (141)
No 1
>PLN02337 lipoxygenase
Probab=100.00 E-value=1e-235 Score=2026.71 Aligned_cols=799 Identities=81% Similarity=1.361 Sum_probs=769.2
Q ss_pred CCCCccccccccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEccCCCceEEeEEEEeecCCCceEEEEecccc
Q 003685 5 NELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWV 84 (803)
Q Consensus 5 ~~~~g~~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV 84 (803)
||++|++++++.|++|........+++.+|+|+|+|+++||+||||.|+|.|.+||||++|+|++.|+.+++||+|||||
T Consensus 68 ~g~~gk~~k~a~l~~w~~~~~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sitle~~p~~g~v~f~cnSWV 147 (866)
T PLN02337 68 NGLRGKLGKEAYLEKWITTITSLTAGESAFKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWI 147 (866)
T ss_pred cCCccccCCccchhhhccCCCCCCCCceEEEEEEEecccCCCcceEEEEecCCceEEEEEEEEecCCCCCcEEEecCCcc
Confidence 55688899999999998654443456679999999999999999999999999999999999998998789999999999
Q ss_pred cCCCCCccceeeecCcccccCCCChHhHHHHHHHHHHhhcCCCCCccccCeeeecccccCCCCCCCCCCCccccCCCCCC
Q 003685 85 YPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQE 164 (803)
Q Consensus 85 ~~~~~~~~~r~ff~~~a~Lp~~t~~~l~~~R~~EL~~~rg~g~g~r~~~~riY~~~~y~dlG~p~~~~~~~rpvlgg~~~ 164 (803)
|+.+.++.+||||+||+|||++||++|+++|++||+++||||+||||+||||||||+|||||+||++++++|||||||.+
T Consensus 148 ~~~~~~~~~RiFF~nk~ylp~~tP~~l~~~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg~pd~~~~~~RpvLGg~~~ 227 (866)
T PLN02337 148 YPAKRYRYDRVFFSNKTYLPSQTPAPLRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQE 227 (866)
T ss_pred ccCCCCCCCceEecCCCcCcccccHHHHHHHHHHHHHhcCCCCCCCCcccchhhhhhhccCCCCCCCccccCccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccCcCCCCcccCCCCccCccccchhhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHH
Q 003685 165 YPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDV 244 (803)
Q Consensus 165 ~pyprr~rtgr~~~~~d~~~~~~~~~~~~~~~lP~de~fs~~K~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~ 244 (803)
|||||||||||+|+++||.+|||.+.....+||||||+|++.|.++|.+.++++++|.++|.++++++.+..+|++|+||
T Consensus 228 ~pyPRR~rTgr~~t~~dp~~esr~~~~~~~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~~~~~~~~~~~~f~~f~~i 307 (866)
T PLN02337 228 YPYPRRGRTGRKPTKTDPNSESRLPLLSLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPELEALFDKTPNEFDSFEDV 307 (866)
T ss_pred CCCCCcccCCCCCCCCCCccccccccCCCCcccCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999999999999999754212479999999999999999999999999999999999998888999999999
Q ss_pred HHhhcCCCCCCCCchhhhhhcccchHHHHHhhhccCccccccCCCccchhccccccCcHHHHHHHhcCCCcccccccccC
Q 003685 245 LNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEF 324 (803)
Q Consensus 245 ~~ly~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~k~p~p~~~~~~~~~W~~D~~Fg~Q~L~G~NP~~I~r~~~~ 324 (803)
.+||.+|+.+|.+...+.+.+.+|+++++++.+.+++.++|||+|+|++.+..+|++|++||||+|||+||++|+||++|
T Consensus 308 ~~ly~~g~~lp~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~fp~P~vi~~d~~~W~~DeeFarQ~LaG~NP~~I~rl~~~ 387 (866)
T PLN02337 308 LKLYEGGIKLPNGPLLEELRKNIPLEMLKELLRTDGEYLLKFPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEF 387 (866)
T ss_pred HHHhhcCCCCCCchHHHHhhhcChHHHHHHHHhhcccccccCCCCceeecccccccCHHHHHHHHhcCCCChheeecccC
Confidence 99999999999875556788889999999999888899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCcccHHHHHhhcCCCCHHHHhhcCceeEeccccccchhhhcccCCCCcccccceEEeecCCCcee
Q 003685 325 PPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLK 404 (803)
Q Consensus 325 P~~~~l~~~~~g~~~~~vt~~~v~~~l~g~tl~~al~~grLFi~Dy~~~~l~~~~~in~~~~~~~Ap~~Lffl~~~g~L~ 404 (803)
|++++||+++||+++|+||++||+..|+|+||++||++|||||+||||.+|||+.++|...+++|||+||||++++|+|+
T Consensus 388 P~~~~ld~~~yg~~~s~iT~e~v~~~L~g~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~~~~k~yA~~tLffl~~dG~L~ 467 (866)
T PLN02337 388 PPKSKLDPKKYGDQNSSITEEHIEKNLEGLTVQEALEKNRLFILDHHDALMPYLRRINSTSTKTYATRTLLFLKDDGTLK 467 (866)
T ss_pred CCcccCChhhcCCccCccCHHHHHhccCCccHHHHHHcCCEEEEecchhcCcccccccCCCCccccceeEEEECCCCCEe
Confidence 99999999999999999999999999999999999999999999999988999999998877799999999999999999
Q ss_pred eEEEEecCCCCCCCCCCCCCeeeeCCCCCCCCchHHHHHHHHHhhhhhhhHHHHhhhhhchhhhHHHHHHhccCCCcCch
Q 003685 405 PLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPI 484 (803)
Q Consensus 405 PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WllAK~~v~~aD~~~Hq~v~Hll~THlv~Epf~vAt~RqLs~~HPv 484 (803)
||||||++|++.++++|+.++||||+|+++++|.|+||||||++||+++||+++||++||+++|||+|||+||||.+|||
T Consensus 468 PlAIqL~~p~~~~~~~g~~~~VfTP~~~~~~~~~W~lAK~~v~~aD~~~HqlisHllrTHlv~EpfiIAt~RqLs~~HPI 547 (866)
T PLN02337 468 PLAIELSLPHPQGDKFGAVSKVYTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPI 547 (866)
T ss_pred EEEEEeccCCCCcccCCCCCCeECCCCCCCCcchHHHHHHHHHHhhHHHHHHHHHHhhhhhhHHHHHHHHhccCCCcCcH
Confidence 99999999876666678899999999766678999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccccchHHHHHhcccCCccccccccchhHHHHHHHHHhcccccCCCCcchHHhhcCCCCCCCCCCcccccC
Q 003685 485 YKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHGIKLL 564 (803)
Q Consensus 485 ~kLL~PH~r~tl~IN~~Ar~~LI~~gG~id~~~~~g~~~~el~~~~y~~w~f~~~~lP~dL~~RG~~~~d~~~~~g~~l~ 564 (803)
|+||.||||+||+||++||+.||++||++|+++++|+++++|++++|++|+|++++||+||++|||+++|+++|||+++.
T Consensus 548 ~kLL~PHfr~Tl~IN~~AR~~LI~~gGiid~~~~~g~~~~els~~~yk~w~F~~~~LP~DL~~RGv~~~D~~~p~g~~l~ 627 (866)
T PLN02337 548 HKLLHPHFRDTMNINALARQILINAGGILESTVFPGKYALEMSSVVYKNWNFTEQALPADLIKRGVAVEDPSSPHGVRLL 627 (866)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeCCCCeeeeeeccchhHHHHHHHHHhcCCcccccCHHHHHHcCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHhhhhcCCCccccCChhHHHHHHHHHhccCCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 003685 565 IEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTIIIW 644 (803)
Q Consensus 565 lp~YpYrdDgl~iW~AI~~fV~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p~~~t~~~Lv~~lT~iIf 644 (803)
||+||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+|+++||++||+|||
T Consensus 628 i~dYPYrdDGL~iW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~p~l~T~~eLv~~lT~iIf 707 (866)
T PLN02337 628 IEDYPYAVDGLEIWSAIETWVKEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCTIIIW 707 (866)
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHHHhhCCchHhhccCHHHHHHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhhhhccCCcccccccCCCcccccCCCCCCCChhhhhhhcCchHHHHhhcccHHHHHHHHHHHHHhccCCCCcccc
Q 003685 645 VASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEVYL 724 (803)
Q Consensus 645 ~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~de~~L 724 (803)
+||+||||||||||+|+||+||+|++||+|||+++++++.+|..+||+++|++||++.||+.+|+++++||+|++||+||
T Consensus 708 ~aSaqHAAVNfgQy~y~gfvPN~P~~~r~~~P~~~~~e~~~l~~~~e~~~L~tlp~~~qt~~~~~l~~lLS~~s~de~yL 787 (866)
T PLN02337 708 IASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYEELEKNPDKAFLKTITAQLQTLLGISLIEILSRHSSDEVYL 787 (866)
T ss_pred hcchhhhhhhcCCcccccccCCCchhhcCCCCCCCchhhhhhccCcHHHHHHhCCCHHHHHHHHHHHHHhccCCCCceec
Confidence 99999999999999999999999999999999888888999999999999999999999999999999999999999999
Q ss_pred cCcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCccccccccccCCCCCCCCCCCccCccCccccC
Q 003685 725 GQRDTPEWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNSVSI 803 (803)
Q Consensus 725 G~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P~~~~~~~~~g~t~~gIpnSisI 803 (803)
|+|+...|+.|+++++|+++|+++|++||++|++||+++++|||+||+++||+||+|++|++.+++|||||||||||||
T Consensus 788 G~~~~~~w~~d~~~~~a~~~F~~~L~eIe~~I~~RN~~~~~knr~G~~~~PY~lL~P~~~~~~~~~g~t~~gIPNSISI 866 (866)
T PLN02337 788 GQRDTPEWTSDAEPLEAFKRFGERLVEIENRIVDMNKDPRLKNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866 (866)
T ss_pred cCcCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcccCCCCCCceeeCCCCccccCCCCcccCCCCCcccC
Confidence 9998789999999999999999999999999999999999999999999999999999999999999999999999998
No 2
>PLN02305 lipoxygenase
Probab=100.00 E-value=8.4e-234 Score=2001.69 Aligned_cols=783 Identities=47% Similarity=0.849 Sum_probs=744.2
Q ss_pred CCCccccccccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEccCCCceEEeEEEEeecCCCceEEEEeccccc
Q 003685 6 ELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVY 85 (803)
Q Consensus 6 ~~~g~~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~ 85 (803)
+|+|+++ ++.|++|... ....+++.+|+|+|+|+++||+||||.|+|.|.+||||++|+|++.|+ +++||+||||||
T Consensus 130 ~g~gk~~-~~~l~~~~~~-~~~~~~~~~~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~-g~v~f~cnSWv~ 206 (918)
T PLN02305 130 TGSGKSV-ESSVRGWLPK-PSNDPHIVEYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDD-GPIFFPANTWIH 206 (918)
T ss_pred CCCcccc-cchhhccccC-CCCCCCceEEEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCC-CeEEEeccCccc
Confidence 4478877 9999999865 332255668999999999999999999999999999999999998897 899999999999
Q ss_pred CCCCCccceeeecCcccccCCCChHhHHHHHHHHHHhhcCCCCCccccCeeeecccccCCCCCCCCCCCccccCCCCCCC
Q 003685 86 PTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEY 165 (803)
Q Consensus 86 ~~~~~~~~r~ff~~~a~Lp~~t~~~l~~~R~~EL~~~rg~g~g~r~~~~riY~~~~y~dlG~p~~~~~~~rpvlgg~~~~ 165 (803)
+.+.++.+||||+||+|||++||++|+++|++||+++||||+||||+||||||||+|||||+||++++++|||||||. |
T Consensus 207 ~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~-~ 285 (918)
T PLN02305 207 SRKDNPESRIIFRNQAYLPSQTPPGIKDLRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEE-W 285 (918)
T ss_pred cCCCCCCCceEecCCCcCcccCCHHHHHHHHHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred CCCCcCCCCCCCCCCCCCCCcccCcCCCCcccCCCCccCccccchhhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHH
Q 003685 166 PYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVL 245 (803)
Q Consensus 166 pyprr~rtgr~~~~~d~~~~~~~~~~~~~~~lP~de~fs~~K~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~ 245 (803)
||||||||||+|+++||.+|+|..... .+||||||+|++.|.++|.+.++++++|.++|.++++++.+..+|++|+||.
T Consensus 286 PYPRR~RTGR~~t~~Dp~~Esr~~~~~-~~YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~ 364 (918)
T PLN02305 286 PYPRRCRTGRPPTKKDPLCESRIEKPH-PVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDID 364 (918)
T ss_pred CCCCcCcCCCCCCCCCCcccccccCCC-CcCCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHH
Confidence 999999999999999999999975432 4799999999999999999999999999999999999988889999999999
Q ss_pred HhhcCCCCCCCCchhhhhhcccch--HHHHHhhhccCccccccCCCccchhccccccCcHHHHHHHhcCCCccccccccc
Q 003685 246 NLYEGGIKLPNSQTVSKIRDRIPW--EMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQE 323 (803)
Q Consensus 246 ~ly~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~k~p~p~~~~~~~~~W~~D~~Fg~Q~L~G~NP~~I~r~~~ 323 (803)
+||.+|+.+|.... +.+.+ +|+ ++++++ +++++.++|||+|+||+.++.+|++|+|||||+|||+||++|+||++
T Consensus 365 ~Ly~~g~~l~~~~~-~~~~~-~p~~~~~~~~i-~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~e 441 (918)
T PLN02305 365 KLYNDGILLKTEEP-KDIGL-NPFLGNFMKQV-LSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKE 441 (918)
T ss_pred HHhccCCcCCchhh-hhhhc-CCchHHHHHHh-hhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccc
Confidence 99999999887311 34444 887 899999 67779999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCCCcccHHHHHhhcCCCCHHHHhhcCceeEeccccccchhhhcccCCCC-cccccceEEeecCCCc
Q 003685 324 FPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNT-KTYASRTLLLLQNDGT 402 (803)
Q Consensus 324 ~P~~~~l~~~~~g~~~~~vt~~~v~~~l~g~tl~~al~~grLFi~Dy~~~~l~~~~~in~~~~-~~~Ap~~Lffl~~~g~ 402 (803)
||++++|||++||+++|+||++||+..|+|+||++||++|||||+||||++|||+.++|...+ +.|||+||||++++|+
T Consensus 442 fP~~skldp~~yG~~~s~iT~e~ve~~L~G~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~ 521 (918)
T PLN02305 442 FPILSKLDPAVYGPPESALTEELIERELEGMTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGA 521 (918)
T ss_pred cCCccccCccccCCcCCCcCHHHHHhhcCCCcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998654 4999999999999999
Q ss_pred eeeEEEEecCCCCCCCCCCCCCeeeeCCCCCCCCchHHHHHHHHHhhhhhhhHHHHhhhhhchhhhHHHHHHhccCCCcC
Q 003685 403 LKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLH 482 (803)
Q Consensus 403 L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WllAK~~v~~aD~~~Hq~v~Hll~THlv~Epf~vAt~RqLs~~H 482 (803)
|+||||||++++..++ ...++||||.+++++.|.|+||||||++||+++||+++||++||+++|||||||+||||.+|
T Consensus 522 L~PlAIqL~~~p~~~~--p~~~~VftP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~H 599 (918)
T PLN02305 522 LRPIAIELSLPPTPSS--PGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMH 599 (918)
T ss_pred EeeEEEEeeCCCCCCC--CCcceeeCCCCCCCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccC
Confidence 9999999999753321 24567999976666789999999999999999999999999999999999999999999999
Q ss_pred chhhcccccccccccchHHHHHhcccCCccccccccchhHHHHHHHHHhcc-cccCCCCcchHHhhcCCCCCCCCCCccc
Q 003685 483 PIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKN-WVFTEQALPADLLKRGVAEPDTSQPHGI 561 (803)
Q Consensus 483 Pv~kLL~PH~r~tl~IN~~Ar~~LI~~gG~id~~~~~g~~~~el~~~~y~~-w~f~~~~lP~dL~~RG~~~~d~~~~~g~ 561 (803)
||||||.||||+||+||++||+.||++||++|++|++|+++++|++++|++ |+|++++||+||++|||+++|+++|||+
T Consensus 600 PI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl 679 (918)
T PLN02305 600 PIYKLLHPHMRYTLEINALARQSLINGGGIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGV 679 (918)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhccCCCCceeeeeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccc
Confidence 999999999999999999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHHhhhhcCCCccccCChhHHHHHHHHHhccCCCCCCCCCCCCCCCHHHHHHHHhh
Q 003685 562 KLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTI 641 (803)
Q Consensus 562 ~l~lp~YpYrdDgl~iW~AI~~fV~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p~~~t~~~Lv~~lT~ 641 (803)
++.||+||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||++.++.+|||+|+|+++||++||+
T Consensus 680 ~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~ 759 (918)
T PLN02305 680 RLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTT 759 (918)
T ss_pred cccCCCCchhhhhHHHHHHHHHHHHHHHHhhCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccchhhhhccCCcccccccCCCcccccCCCCCCCChhhhhhhcCchHHHHhhcccHHHHHHHHHHHHHhccCCCCc
Q 003685 642 IIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDE 721 (803)
Q Consensus 642 iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~de 721 (803)
|||+||+||||||||||+|+||+||+|++||+|||++++.++.++..+||+++|++||++.||+.+|+++++||+|++||
T Consensus 760 IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp~P~~~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de 839 (918)
T PLN02305 760 MIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDE 839 (918)
T ss_pred hhhhcchhhhhhhcCCcccccccCCCchhhcCCCCCCCCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCc
Confidence 99999999999999999999999999999999999877888999999999999999999999999999999999999999
Q ss_pred ccccCcCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCccccccccccCCCCCCCCCCCccCccCc
Q 003685 722 VYLGQRDTP--EWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPN 799 (803)
Q Consensus 722 ~~LG~~~~~--~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P~~~~~~~~~g~t~~gIpn 799 (803)
+|||+|... .|+.|+++++|+++|+++|++||++|++||+++++|||+||+.+||+||+|++ ++|||||||||
T Consensus 840 ~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s-----~~G~T~rgIPN 914 (918)
T PLN02305 840 EYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTS-----GPGVTGRGIPN 914 (918)
T ss_pred ccccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCCC-----CCCCCcCCCCC
Confidence 999999754 79999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cccC
Q 003685 800 SVSI 803 (803)
Q Consensus 800 SisI 803 (803)
||||
T Consensus 915 SISI 918 (918)
T PLN02305 915 SISI 918 (918)
T ss_pred cccC
Confidence 9998
No 3
>PLN02264 lipoxygenase
Probab=100.00 E-value=1.3e-232 Score=1991.82 Aligned_cols=783 Identities=46% Similarity=0.842 Sum_probs=744.5
Q ss_pred CCCccccccccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEccCCCceEEeEEEEeecCCCceEEEEeccccc
Q 003685 6 ELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVY 85 (803)
Q Consensus 6 ~~~g~~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~ 85 (803)
+|+|++|+++.|++|... ....+++.+|+|+|+|+++||+||||.|+|.|.+||||++|+|++.|+ +++||+||||||
T Consensus 133 tg~~~~~~~a~l~~~~~~-~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~-g~v~F~cnSWV~ 210 (919)
T PLN02264 133 TKEPKKSKAAVLKDWSKK-SNIKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFAC-GPVHFPCNSWVQ 210 (919)
T ss_pred CCCccCCCcchhcccccC-CCCCCCceEEEEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCC-CcEEEecCCccc
Confidence 567899999999999865 333466679999999999999999999999999999999999988887 899999999999
Q ss_pred CCCCCccceeeecCcccccCCCChHhHHHHHHHHHHhhcCCCCCccccCeeeecccccCCCCCCCCCCCccccCCCCCCC
Q 003685 86 PTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEY 165 (803)
Q Consensus 86 ~~~~~~~~r~ff~~~a~Lp~~t~~~l~~~R~~EL~~~rg~g~g~r~~~~riY~~~~y~dlG~p~~~~~~~rpvlgg~~~~ 165 (803)
+.++++.+||||+||+|||++||++|+++|++||+++||||+||||+||||||||+|||||+||++++++|||||||. |
T Consensus 211 p~~~~~~~RiFF~Nk~YLP~~tP~~l~~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~-~ 289 (919)
T PLN02264 211 SQKDHPGKRIFFTNQPYLPSETPAGLRALREKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARPTLGGKK-I 289 (919)
T ss_pred cCcCCCCCceEecCCCcCcccCCHHHHHHHHHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCcccCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999987 9
Q ss_pred CCCCcCCCCCCCCCCCCCCCcccCcCCCCcccCCCCccCccccchhhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHH
Q 003685 166 PYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVL 245 (803)
Q Consensus 166 pyprr~rtgr~~~~~d~~~~~~~~~~~~~~~lP~de~fs~~K~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~ 245 (803)
||||||||||+|+++||.+|||.+... .+||||||+|++.|.++|.+.++++++|.++|.++++++.+ +|++|+||.
T Consensus 290 PYPRR~RTGR~~t~~dp~~Esr~~~~~-~iYvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~~f~~i~ 366 (919)
T PLN02264 290 PYPRRCRTGRLPTDSDMMAESRVEKPL-PMYVPRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFANFGEID 366 (919)
T ss_pred CCCCCCcCCCCCCCCCCcccccccCCC-ceeCCCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCCCHHHHH
Confidence 999999999999999999999975532 47999999999999999999999999999999999998864 999999999
Q ss_pred HhhcCCCCCCCCchhhhhhcccch-HHHHHhhhccCccccccCCCccchhccccccCcHHHHHHHhcCCCcccccccccC
Q 003685 246 NLYEGGIKLPNSQTVSKIRDRIPW-EMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEF 324 (803)
Q Consensus 246 ~ly~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~k~p~p~~~~~~~~~W~~D~~Fg~Q~L~G~NP~~I~r~~~~ 324 (803)
+||.+|+.+|.....+.+.+ +|+ ++++++ +++++.++|||+|+||+.+..+|++|++||||+|||+||++|+||++|
T Consensus 367 ~Ly~~g~~l~~~~~~~~~~~-~p~~~~~~~~-~~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~I~rl~e~ 444 (919)
T PLN02264 367 SLYKEGLLLKLGFQDDIFKK-FPLPKVVTTL-QESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVNIERVKVF 444 (919)
T ss_pred HHHhcCCcCCcchhhhHhhc-CChHHHHHHh-hhcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchhhhhhhhc
Confidence 99999999887422234444 898 899999 677799999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCcccHHHHHhhcCCCCHHHHhhcCceeEeccccccchhhhcccCCCCc-ccccceEEeecCCCce
Q 003685 325 PPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTK-TYASRTLLLLQNDGTL 403 (803)
Q Consensus 325 P~~~~l~~~~~g~~~~~vt~~~v~~~l~g~tl~~al~~grLFi~Dy~~~~l~~~~~in~~~~~-~~Ap~~Lffl~~~g~L 403 (803)
|++++||++.||++.|+||++||+..|+|+||++||++|||||+||||++||+++++|...++ .|||+||||++++|+|
T Consensus 445 P~~s~ld~~~yg~~~s~it~e~v~~~L~G~Tl~eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLFfL~~dG~L 524 (919)
T PLN02264 445 PPVSNLDPEIYGPQHSALTEDHIIGHLDGLSVQQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIFFLTRLGTL 524 (919)
T ss_pred CCCCCCCHhhcCCccchhhHHHHhhccCCCcHHHHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEEEECCCCCE
Confidence 999999999999999999999999999999999999999999999999999999999987664 9999999999999999
Q ss_pred eeEEEEecCCCCCCCCCCCCCeeeeCCCCCCCCchHHHHHHHHHhhhhhhhHHHHhhhhhchhhhHHHHHHhccCCCcCc
Q 003685 404 KPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHP 483 (803)
Q Consensus 404 ~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WllAK~~v~~aD~~~Hq~v~Hll~THlv~Epf~vAt~RqLs~~HP 483 (803)
+||||||+|+++.++ ...++||||.++++++|.|+||||||++||+++||+++||++||+++|||+|||+||||.+||
T Consensus 525 ~PlAIqL~~p~~~~~--~~~~~VftP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~RqLs~~HP 602 (919)
T PLN02264 525 KPIAIELSLPPSGPN--SRSKRVVTPPVDATSNWMWQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHP 602 (919)
T ss_pred eeEEEEecCCCCCCC--cCcceeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhcccCCccCc
Confidence 999999999853221 246799999665667899999999999999999999999999999999999999999999999
Q ss_pred hhhcccccccccccchHHHHHhcccCCccccccccchhHHHHHHHHHhcc-cccCCCCcchHHhhcCCCCCCCCCCcccc
Q 003685 484 IYKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKN-WVFTEQALPADLLKRGVAEPDTSQPHGIK 562 (803)
Q Consensus 484 v~kLL~PH~r~tl~IN~~Ar~~LI~~gG~id~~~~~g~~~~el~~~~y~~-w~f~~~~lP~dL~~RG~~~~d~~~~~g~~ 562 (803)
|||||.||||+||+||++||+.||++||++|++|++|+++++|++++|++ |+|++++||+||++|||+++|+++|||++
T Consensus 603 I~kLL~PHfr~TL~INalAR~~LIn~gGiid~~f~pg~~~~elss~aYk~~W~F~~~~LP~DL~~RGv~~~D~~~phgl~ 682 (919)
T PLN02264 603 IFKLLDPHMRYTLEINALARQTLISADGVIESCFTAGQYGMEISAAAYKNSWRFDMEGLPADLIRRGMAVPDPTQPHGLK 682 (919)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeeccchhHHHHHHHHHHhccCCccccCHHHHHHcCCCCCCcccccchh
Confidence 99999999999999999999999999999999999999999999999996 99999999999999999999999999999
Q ss_pred cCCCCCccchhhHHHHHHHHHHHHHHhhhhcCCCccccCChhHHHHHHHHHhccCCCCCCCCCCCCCCCHHHHHHHHhhh
Q 003685 563 LLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTII 642 (803)
Q Consensus 563 l~lp~YpYrdDgl~iW~AI~~fV~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p~~~t~~~Lv~~lT~i 642 (803)
+.||+||||||||+||+||++||++||++||++|++|++|.|||+||+||++.||+++++.+|||+|+|+++||++||+|
T Consensus 683 l~ipdYPYrdDGL~iW~AIk~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~~d~~~~p~l~T~~eLi~~lT~I 762 (919)
T PLN02264 683 LLIEDYPYANDGLLLWSAIQTWVRTYVERYYPDPSLICTDKELQAWYSESINVGHADLRDADWWPKLSTVDDLVSILTTL 762 (919)
T ss_pred hccCCCcchhhHHHHHHHHHHHHHHHHHHhCCChhhhcCCHHHHHHHHHHHhccCCCCcCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccchhhhhccCCcccccccCCCcccccCCCCCCCChhhhhhhcCchHHHHhhcccHHHHHHHHHHHHHhccCCCCcc
Q 003685 643 IWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEV 722 (803)
Q Consensus 643 If~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~de~ 722 (803)
||+||+||||||||||+|+||+||+|++||+|||++++.+|+++..+|++++|++||++.||+.+|+++++||+|++||+
T Consensus 763 If~aSaqHAAVNFgQydy~gfvPN~P~~~rrp~P~~~~~e~~~~~~~pe~~~L~tlP~~~qt~~~ms~~~iLS~hs~dE~ 842 (919)
T PLN02264 763 IWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDESDPEYASFLADPQKYYFSSMPSLLQTTKFMAVVDTLSTHSPDEE 842 (919)
T ss_pred HHhhhhhhhhhhcCcccccccCCCCChHhcCCCCCCCChhhhhhhcChHHHHHHHCCCHHHHHHHHHHHHHHhhcCCCce
Confidence 99999999999999999999999999999999998778899999999999999999999999999999999999999999
Q ss_pred cccCcCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCccccccccccCCCCCCCCCCCccCccCccc
Q 003685 723 YLGQRDTP-EWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNSV 801 (803)
Q Consensus 723 ~LG~~~~~-~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P~~~~~~~~~g~t~~gIpnSi 801 (803)
|||+|... .|+.|+++++|+++|+++|++||++|++||+++++|||+||+.+||+||+|++ +||||||||||||
T Consensus 843 yLG~~~~~~~w~~D~~~~~af~rF~~~L~eIe~~I~~RN~~~~~knR~G~~~~PY~lL~P~s-----~~G~T~~gIPNSI 917 (919)
T PLN02264 843 YIGERQQPSIWTGDAEIVEAFYGFSAEIGRIEKEIEKRNADPSRRNRCGAGVLPYELLAPSS-----EPGVTCRGVPNSV 917 (919)
T ss_pred eccCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCCCCceeeCCCC-----CCCCCcCCCCCcc
Confidence 99998654 89999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred cC
Q 003685 802 SI 803 (803)
Q Consensus 802 sI 803 (803)
||
T Consensus 918 SI 919 (919)
T PLN02264 918 SI 919 (919)
T ss_pred cC
Confidence 98
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=5.2e-192 Score=1662.92 Aligned_cols=665 Identities=60% Similarity=1.007 Sum_probs=578.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCccccCeeeecccccCCCCCCCCCCCccccCCCCCCCCCCCcCCCCCCCCCCCCCCCcc
Q 003685 108 PEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERR 187 (803)
Q Consensus 108 ~~~l~~~R~~EL~~~rg~g~g~r~~~~riY~~~~y~dlG~p~~~~~~~rpvlgg~~~~pyprr~rtgr~~~~~d~~~~~~ 187 (803)
|.+|+++|++||+++||||+||||+||||||||+|||||+||+++++.|||||||++|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCcccCCCCccCccccchhhhhhHHHHHHhhhhhhhhhccCCCCCCCCHHHHHHhhcCCCCCCCCchhhhhhccc
Q 003685 188 LPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRI 267 (803)
Q Consensus 188 ~~~~~~~~~lP~de~fs~~K~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ly~~~~~~~~~~~~~~~~~~~ 267 (803)
. ..+||||||+|++.|..+|.+++++++++.++|.+++++..+..+|+||+||++||+.|+++| .+.+.+.+
T Consensus 81 ~----~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~----~~~~~~~~ 152 (667)
T PF00305_consen 81 S----GDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLP----TDLLKKLI 152 (667)
T ss_dssp -----SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE------HHHHCCHT
T ss_pred c----ccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccch----hhHhhhcC
Confidence 3 379999999999999999999999999999999999998777889999999999999998877 34566778
Q ss_pred chHHHHHhhhccCccccccCCCccchhccccccCcHHHHHHHhcCCCcccccccccCCCCCCCCCcccCCCCCcccHHHH
Q 003685 268 PWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADI 347 (803)
Q Consensus 268 p~~~~~~~~~~~~~~~~k~p~p~~~~~~~~~W~~D~~Fg~Q~L~G~NP~~I~r~~~~P~~~~l~~~~~g~~~~~vt~~~v 347 (803)
|+++++++.+++++.++|||.|+|+++++.+|++|++||||+|||+||++|+||+++|++++||+++||+++++||++||
T Consensus 153 ~~~~~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i 232 (667)
T PF00305_consen 153 PLELLKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHI 232 (667)
T ss_dssp TSTTCCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHH
T ss_pred cHHHHHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCHHHHhhcCceeEeccccccchhhhcccCCCCcccccceEEeecCCCceeeEEEEecCCCCCCCCCCCCCeee
Q 003685 348 ERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVF 427 (803)
Q Consensus 348 ~~~l~g~tl~~al~~grLFi~Dy~~~~l~~~~~in~~~~~~~Ap~~Lffl~~~g~L~PIAIqL~~~~~~~~~~~~~~~Vf 427 (803)
+..|+|+||++||++|||||+||+++.+++++++++...+.|||+||||++++|+|+||||||++|++.+ ++..++||
T Consensus 233 ~~~l~g~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~--~~~~~~v~ 310 (667)
T PF00305_consen 233 EPQLEGLTLEEALKDGRLFILDYHDLFGPYLNKINEKGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEG--PPQFNPVF 310 (667)
T ss_dssp HHHCHCS-HHHHHHTT-EEEEEEGGGTTHHHHHHTTCCGBG-EEEEEEEEETTSEEEEEEEECSECBTTC--S-EEEEEE
T ss_pred hhccCCCcHHHHHhcCCeEEEeehhhccccccccccCCcEeccceeEEEEcCCCCEeeeEEeccCCCCcc--cCccceee
Confidence 9999999999999999999999999999999999996667999999999999999999999998874321 24568999
Q ss_pred eCCCCCCCCchHHHHHHHHHhhhhhhhHHHHhhhhhchhhhHHHHHHhccCCCcCchhhcccccccccccchHHHHHhcc
Q 003685 428 TPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILI 507 (803)
Q Consensus 428 tP~d~~~~~~~WllAK~~v~~aD~~~Hq~v~Hll~THlv~Epf~vAt~RqLs~~HPv~kLL~PH~r~tl~IN~~Ar~~LI 507 (803)
||+++++.+|.|+||||||++||+++||+++||++||+|||||+|||+||||.+||||+||.|||++||+||++||..||
T Consensus 311 tP~~d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li 390 (667)
T PF00305_consen 311 TPSDDGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLI 390 (667)
T ss_dssp -TTSSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTS
T ss_pred ecCCCCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhh
Confidence 99944444577999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccccchhHHHHHHHHHhcccccCCCCcchHHhhcCCCCCCCCCCcccccCCCCCccchhhHHHHHHHHHHHHH
Q 003685 508 NAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKE 587 (803)
Q Consensus 508 ~~gG~id~~~~~g~~~~el~~~~y~~w~f~~~~lP~dL~~RG~~~~d~~~~~g~~l~lp~YpYrdDgl~iW~AI~~fV~~ 587 (803)
++||++|++|++|+++++|++++|++|+|++++||+||++|||+++|++++||+++.||+||||||||+||+||++||++
T Consensus 391 ~~gG~id~~~~~g~~~~~l~~~~y~~~~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpY~dDgl~iW~aI~~~V~~ 470 (667)
T PF00305_consen 391 NAGGIIDKTFSPGKYGMELSSRAYKNWRFDDQALPADLKKRGMAVDDPSSPHGLRLVLPDYPYRDDGLLIWDAIKKFVSD 470 (667)
T ss_dssp STTSHHHHHSTTTTTHHHHHHHHHTT--GGGGSHHHHHHHTTSEEE-TTSTTSEETTSTT-HHHHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccchhhHHHHHHHHHHhhCCcccccCHHHHHhhcccccccccccccccccccCChhHHHHHHHHHHHHHHHH
Confidence 99999999999999889999999999999999999999999999989999999999999999999999999999999999
Q ss_pred HhhhhcCCCccccCChhHHHHHHHHHhccCCCCCCCCCCCCCCCHHHHHHHHhhhhhhccchhhhhccCCcccccccCCC
Q 003685 588 YCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNR 667 (803)
Q Consensus 588 ~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p~~~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~ 667 (803)
||++||++|++|++|.|||+||+||+++||++.++.++|++|+|+++||++||+|||+||+||||||||||+|+||+||+
T Consensus 471 ~v~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~~~i~t~~~Li~~lT~iI~~~S~qHaAVNfgQ~~y~g~~PN~ 550 (667)
T PF00305_consen 471 YVNLYYKSDEAVANDTELQAWWNEIRTVGHGDKKDEGFPPKIKTRDELIDILTTIIFTASAQHAAVNFGQYDYYGFVPNR 550 (667)
T ss_dssp HHHHHSSSHHHHHT-HHHHHHHHHHHHTTTTGGTTGTTSSSSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGS
T ss_pred hhhhhcCCcceeCcCHHHHHHHHHHhcccccCcCcCCCCCCCCCHHHHHHHHHHHeeecchhhhhhcccccceeeecCCC
Confidence 99999999999999999999999999999999998887788999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCChh--hhhhhcCchHHHHhhcccHHHHHHHHHHHHHhccCCCCcccccCcCCCCCCCChHHHHHHHHH
Q 003685 668 PTVSRRFMPEPGTPE--YAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEVYLGQRDTPEWTLDNEPLAAFERF 745 (803)
Q Consensus 668 P~~lr~p~P~kg~~~--~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~de~~LG~~~~~~~~~d~~~~~a~~~F 745 (803)
|++||+++|.+++++ ++++..+||+++|++||++.+|+.+|+++++||+|++||+|||+|+...|+.|+++++|+++|
T Consensus 551 P~~~r~~~P~~~~~~~~~~~l~~~~e~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~Lg~~~~~~w~~d~~~~~a~~~F 630 (667)
T PF00305_consen 551 PTALRRPMPPPTTKEVTYEELLKDPEKDFLSTLPSKQQALLQMAVLELLSRHSPDEEYLGQYPEPHWFSDPEAKAAFERF 630 (667)
T ss_dssp -S-BSSSS--TSSSH--HHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTCB-TT--BTTT-SSTTSSSSHHHHHHHHHH
T ss_pred ChhhcccCCCCCcchhhhhhhccChHHHHHHhcCCHHHHHHHHHHHHHhccCCCCcccccCcCcccccccHHHHHHHHHH
Confidence 999999888777777 888999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHHHHHHHHHHHHHhCCccccccCCCccccccccccC
Q 003685 746 GNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPN 782 (803)
Q Consensus 746 ~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P~ 782 (803)
+++|++||++|++||+++.+|||+|++++||+||+||
T Consensus 631 ~~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~Ps 667 (667)
T PF00305_consen 631 QEELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLPS 667 (667)
T ss_dssp HHHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSST
T ss_pred HHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCC
Confidence 9999999999999999999999999999999999997
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=99.86 E-value=6.1e-22 Score=190.17 Aligned_cols=90 Identities=46% Similarity=0.929 Sum_probs=82.3
Q ss_pred CCCccccccccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEccCCCceEEeEEEEeecCCCceEEEEeccccc
Q 003685 6 ELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVY 85 (803)
Q Consensus 6 ~~~g~~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~ 85 (803)
+|+|++++++.|++|.... +++.+|+++|+|+++||+||||+|+|+|++|+||++|+|++.|+.++++|+||||||
T Consensus 48 tg~~k~~~~~~l~~~~~~~----~~e~~y~~~F~v~~~fG~pGAi~V~N~h~~EffLksitLe~~p~~g~v~F~CNSWVy 123 (137)
T cd01751 48 TGKGKKGKAAFLEGWGKSL----AGESAYEAEFEVPASFGPPGAVLVKNEHHSEFFLKSITLEGFGGSGTITFVCNSWVY 123 (137)
T ss_pred CCCcccccceeeecccccC----CcceEEEEEEEeecccCCccEEEEEECCCceEEEEEEEEeCCCCCccEEEEccccCc
Confidence 4588899999999998432 445589999999999999999999999999999999999988877899999999999
Q ss_pred CCCCCccceeeecC
Q 003685 86 PTHRYKYDRVFFSN 99 (803)
Q Consensus 86 ~~~~~~~~r~ff~~ 99 (803)
+...++.+||||+|
T Consensus 124 p~~~~~~~RiFFsN 137 (137)
T cd01751 124 PKKDYPDKRIFFPN 137 (137)
T ss_pred cCCCCCCCCEEccC
Confidence 99999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=99.11 E-value=2.8e-10 Score=104.68 Aligned_cols=70 Identities=44% Similarity=0.806 Sum_probs=56.6
Q ss_pred ccccccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEccC-CCceEEeEEEEeecCCCceEEEEecccccC
Q 003685 11 LGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHH-HSQFYLKTVTLEDVPGHGRIHFVCNSWVYP 86 (803)
Q Consensus 11 ~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~-~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~~ 86 (803)
.+....+..|. |+ +|.+.+|.|+ ++.+||++++|+|++++ .++|||++|+|+..+.++.++||||+||++
T Consensus 34 ~~~~~~~~~~~--f~--~g~~~~f~v~--~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~~~~~~~~F~c~~Wl~~ 104 (105)
T smart00308 34 ESKLDYLFKGI--FA--RGSTYEFTFD--VDEDFGELGAVKIKNEHRHPEWFLKSITVKDLPTGGKYHFPCNSWVYP 104 (105)
T ss_pred ceeccccCCcc--cc--CCceEEEEEe--cccCCCCcEEEEEEeCCCCCCeEEEEEEEEECCCCCEEEEEcCceeCC
Confidence 34444444442 43 4888778777 68999999999999998 899999999998777789999999999976
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=99.03 E-value=5.6e-10 Score=103.35 Aligned_cols=67 Identities=31% Similarity=0.548 Sum_probs=61.3
Q ss_pred CceEEEEEEEecCCCCCCceEEEEEcc---CCCceEEeEEEEeecCCCceEEEEecccccCCCCCccceeee
Q 003685 29 AVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVFF 97 (803)
Q Consensus 29 ~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~~~~~~~~~r~ff 97 (803)
|++++|.++ .+.++|+|..|+|+++ ..++|||++|+|+..+.+..+.||||+||.....++..|+||
T Consensus 44 g~~d~F~i~--~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 44 GSTDTFTIE--TPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp TEEEEEEEE--ESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred CceEEeeee--ecccCCCCcEEEEEEccCCCccceEEEEEEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 888899988 4789999999999987 789999999999876788999999999999999888999997
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.88 E-value=7.2e-09 Score=97.00 Aligned_cols=68 Identities=18% Similarity=0.290 Sum_probs=58.5
Q ss_pred CCCceEEEEEEEecCCCCCCceEEEEEccCC---CceEEeEEEEeecCCCceEEEEecccccCCCCCccceee
Q 003685 27 LTAVETLFTITFDWDEAMGVPGAFIIRNHHH---SQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRYKYDRVF 96 (803)
Q Consensus 27 ~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~---~ewf~~~i~v~~~p~~~~~~Fpc~sWV~~~~~~~~~r~f 96 (803)
.+|++++|.|+ ++.++|++.+|+|++++. .+|||++|+|+....|..+.||||+||.....++..|+|
T Consensus 45 ~~g~~~~f~v~--~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~ 115 (116)
T cd00113 45 ERGSTDTFQID--LKLDIGDITKVYLRRDGSGLSDGWYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRSL 115 (116)
T ss_pred cCCCceEEEEe--ccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceeec
Confidence 45889999888 567999999999998764 599999999986777789999999999998777777776
No 9
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=98.78 E-value=1.8e-08 Score=94.72 Aligned_cols=75 Identities=15% Similarity=0.258 Sum_probs=61.3
Q ss_pred ccccccccccccccCCCCCceEEEEEEEecCCCCCCceEEEEEcc---CCCceEEeEEEEeecCCCceEEEEecccccCC
Q 003685 11 LGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPT 87 (803)
Q Consensus 11 ~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~~~ 87 (803)
.|.+..|++..++|+ +|++++|.|+ ++.++|++-.|+|+++ ..+.|||++|+|+ .+.+..++||||+|+.+.
T Consensus 31 ~S~~~~L~~~~~~Fe--rG~~d~F~v~--~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~-~~~~~~~~F~c~rWl~~~ 105 (113)
T cd01753 31 ESEKQLLDRPGYDFE--RGAVDEYKVK--VPEDLGELLLVRLRKRKYLLFDAWFCNYITVT-GPGGDEYHFPCYRWIEGY 105 (113)
T ss_pred cccCEEcCCCCCccC--CCCeeEEEEe--cccCCCCcEEEEEEECCCCCCCCeeecEEEEE-cCCCCEEEEEhHHeECCC
Confidence 466677766444565 5999999999 5789999999999876 3789999999997 555889999999999987
Q ss_pred CCC
Q 003685 88 HRY 90 (803)
Q Consensus 88 ~~~ 90 (803)
+++
T Consensus 106 ~~~ 108 (113)
T cd01753 106 GTL 108 (113)
T ss_pred CEE
Confidence 654
No 10
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.74 E-value=2.6e-08 Score=92.94 Aligned_cols=56 Identities=14% Similarity=0.225 Sum_probs=49.9
Q ss_pred CCCceEEEEEEEecCCCCCCceEEEEEcc-CCCceEEeEEEEeecCCCceEEEEecccccC
Q 003685 27 LTAVETLFTITFDWDEAMGVPGAFIIRNH-HHSQFYLKTVTLEDVPGHGRIHFVCNSWVYP 86 (803)
Q Consensus 27 ~~~~~~~y~v~f~~~~~fG~pgai~v~n~-~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~~ 86 (803)
.+|++++|.|+ +.++|++-.|+|.|. ..+.|||++|+|+ .|.|..++||||+|+..
T Consensus 42 ~~G~~d~F~v~---~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~-~~~g~~~~Fpc~rWla~ 98 (109)
T cd02899 42 YPGSLKRIRFR---AADVGDINAIILSNTALNDPWYCDYVRIK-SEDGKVFAFNVKRWIGY 98 (109)
T ss_pred CCCceEEEEEC---ccccCceEEEEEECCCCCCCceeeEEEEE-CCCCCEEEEEcceeeCC
Confidence 45999999988 789999999999886 4789999999997 58889999999999975
No 11
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=98.51 E-value=5.5e-07 Score=85.38 Aligned_cols=82 Identities=16% Similarity=0.239 Sum_probs=63.7
Q ss_pred cccccccccc--ccccCCCCCceEEEEEEEecCCCCCCceEEEEEccC---CCceEEeEEEEeecCCCceEEEEeccccc
Q 003685 11 LGKVAYLEKW--ITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHH---HSQFYLKTVTLEDVPGHGRIHFVCNSWVY 85 (803)
Q Consensus 11 ~s~~~~l~~~--~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~---~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~ 85 (803)
.|....|+++ .++|+ +|++++|.|+ . .++|++-.|+|+++. .+.|||+.|+|+....+..++||||+|+.
T Consensus 31 ~s~~~~L~~~~~~~~Fe--rGs~d~F~i~--~-~~lG~l~~i~i~~d~~g~~~~W~~~~V~V~~~~~~~~~~F~~~~Wl~ 105 (120)
T cd01756 31 DTGKRKLKKSNNKNKFE--RGQTDKFTVE--A-VDLGKLKKIRIGHDNSGLGAGWFLDKVEIREPGTGDEYTFPCNRWLD 105 (120)
T ss_pred ccccEEccCCCcCCccc--CCCeEEEEEE--e-cCCCCeEEEEEEECCCCCCCCcEEeEEEEEECCCceEEEEEeCCccC
Confidence 4667777764 44554 5999999999 3 799999999999763 57999999999866668899999999998
Q ss_pred CCCCC-ccceeee
Q 003685 86 PTHRY-KYDRVFF 97 (803)
Q Consensus 86 ~~~~~-~~~r~ff 97 (803)
..+.. ...|+|.
T Consensus 106 ~~~~dg~~~r~~~ 118 (120)
T cd01756 106 KDEDDGQIVRELY 118 (120)
T ss_pred CCCCCCEEEEEEE
Confidence 76543 2355543
No 12
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=98.37 E-value=1.3e-06 Score=83.89 Aligned_cols=61 Identities=11% Similarity=0.128 Sum_probs=50.6
Q ss_pred CCCceEEEEEEEecCCCCCCceEEEEEcc---CCCceEEeEEEEeecCC---CceEEEEecccccCCCC
Q 003685 27 LTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKTVTLEDVPG---HGRIHFVCNSWVYPTHR 89 (803)
Q Consensus 27 ~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~ewf~~~i~v~~~p~---~~~~~Fpc~sWV~~~~~ 89 (803)
.+|++++|.|+ .+.++|++-.|+|++. ....|||++|+|+.... ++.++||||+|+...+.
T Consensus 53 erG~~d~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 53 ERGNLDRFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred cCCCccEEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 45999999999 5788999999999975 47899999999975433 35899999999977654
No 13
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=98.36 E-value=1.7e-06 Score=82.05 Aligned_cols=82 Identities=17% Similarity=0.272 Sum_probs=61.2
Q ss_pred cccccccccc-ccccCCCCCceEEEEEEEecCCCCCCceEEEEEcc---CCCceEEeEEEEeecCCCceEEEEecccccC
Q 003685 11 LGKVAYLEKW-ITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKTVTLEDVPGHGRIHFVCNSWVYP 86 (803)
Q Consensus 11 ~s~~~~l~~~-~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~~ 86 (803)
.|....|.+. .++|+ +|++++|.|. .+.++|++-.|+|+.+ ....|||++|+|+....+..+.||||+|+..
T Consensus 31 ~s~~~~L~~~~~~~F~--rG~~~~f~i~--~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~~~~t~~~~~F~~~rWl~~ 106 (120)
T cd01752 31 ESEPHHLRDPEKPIFE--RGSVDSFLLT--TPFPLGELQSIRLWHDNSGLSPSWYLSRVIVRDLQTGKKWFFLCNDWLSV 106 (120)
T ss_pred CcccEEcCCCCcccee--CCCeeEEEec--CccCCCCccEEEEEECCCCCCCCeEEEEEEEEECCCCcEEEEEeCcEECC
Confidence 3555666542 23454 5999999998 5789999999999865 3689999999997555578999999999987
Q ss_pred CCCC-ccceee
Q 003685 87 THRY-KYDRVF 96 (803)
Q Consensus 87 ~~~~-~~~r~f 96 (803)
.+.. ...|+|
T Consensus 107 ~~~d~~~~r~~ 117 (120)
T cd01752 107 EEGDGTVERTF 117 (120)
T ss_pred cCCCCEEEEEE
Confidence 6442 334553
No 14
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=98.06 E-value=1.1e-05 Score=75.99 Aligned_cols=48 Identities=13% Similarity=0.232 Sum_probs=42.2
Q ss_pred CCCCCCceEEEEEcc---CCCceEEeEEEEeecCCCceEEEEecccccCCC
Q 003685 41 DEAMGVPGAFIIRNH---HHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTH 88 (803)
Q Consensus 41 ~~~fG~pgai~v~n~---~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~~~~ 88 (803)
+.++|+.-.|+|+++ ....|||++|+|+..+.+..++||||+|+.-.+
T Consensus 49 ~~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~ 99 (114)
T cd01757 49 CQNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGV 99 (114)
T ss_pred cCCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCC
Confidence 389999999999976 378999999999877888999999999997654
No 15
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=75.89 E-value=11 Score=35.84 Aligned_cols=53 Identities=8% Similarity=0.095 Sum_probs=40.1
Q ss_pred CCCceEEEEEEEecCCCCCCceEEEEEccC----------CCceEEeEEEEeecCCCceEEEEecc
Q 003685 27 LTAVETLFTITFDWDEAMGVPGAFIIRNHH----------HSQFYLKTVTLEDVPGHGRIHFVCNS 82 (803)
Q Consensus 27 ~~~~~~~y~v~f~~~~~fG~pgai~v~n~~----------~~ewf~~~i~v~~~p~~~~~~Fpc~s 82 (803)
.+|.+.+|-|. .+.++|..-.|.++-+. ...||++.|+|+...++..+. -|-+
T Consensus 43 ~~g~~~sfli~--t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~get~~~~~-FC~~ 105 (120)
T cd01755 43 KPNKTYSFLID--TEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKIRVKSGETQKKFT-FCSQ 105 (120)
T ss_pred cCCCEEEEEEE--cCCCccceEEEEEEEcCCCcccccccCCCcEEEEEEEEEECCCCCEEE-EECC
Confidence 45888888887 68999999999887431 358999999998666655555 4655
No 16
>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress). ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].
Probab=55.87 E-value=31 Score=33.46 Aligned_cols=56 Identities=11% Similarity=0.076 Sum_probs=41.2
Q ss_pred CCceEEEEEEEecCCCCCCceEEEEEccCCCceEEeEEEEeecCCCceEEEEecccccCC
Q 003685 28 TAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPT 87 (803)
Q Consensus 28 ~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~~~ 87 (803)
+...++|.|. -+. ++.+=-+.|++.-.|.|+.++|+|.. ....+++|-.|.||-..
T Consensus 62 rCs~DtF~v~--G~C-~~~IC~lyL~r~G~dGW~Pe~V~Iy~-~~~~~~~F~~~~~lp~~ 117 (125)
T PF06232_consen 62 RCSTDTFQVT--GPC-LYQICYLYLYRSGSDGWKPEWVQIYG-SGSKPVTFYFNTFLPNG 117 (125)
T ss_pred cCCcceeEee--ccc-CCcccEEEEEEccCCCCEeCeEEEEE-cCCCCeEEECCCcCCCC
Confidence 3778889887 333 44554555665556899999999964 45578999999999764
No 17
>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]
Probab=51.58 E-value=6.4 Score=48.17 Aligned_cols=58 Identities=17% Similarity=0.363 Sum_probs=41.1
Q ss_pred ceEEEEEEEecCCCCCCceEEEEEcc---CCCceEEeEEEEeecCCCceEEEEecccccCCCCC
Q 003685 30 VETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKTVTLEDVPGHGRIHFVCNSWVYPTHRY 90 (803)
Q Consensus 30 ~~~~y~v~f~~~~~fG~pgai~v~n~---~~~ewf~~~i~v~~~p~~~~~~Fpc~sWV~~~~~~ 90 (803)
.+-.|+.++ +++|..--++|-.. ....||++.|-|...=.|.+|-|||.+|.-+.+..
T Consensus 1011 n~~~f~F~~---kNLG~LtT~rIGHdnS~~~~kW~vEyV~vRNEiTG~TYKFPCGrw~G~gedi 1071 (1295)
T KOG2080|consen 1011 NTPLFKFDH---KNLGILSTLRIGHQQSEKPVQWFLEYVLVRNEITGQTYKFPCGRWFGNGEDI 1071 (1295)
T ss_pred CCceeEEec---cccceeeeEEecccCCCcchHHHHHHhhhhceeccceeccccccccCCcccc
Confidence 333455443 78998877777443 24679999998754335899999999998776544
No 18
>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL). LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=37.17 E-value=1.1e+02 Score=30.17 Aligned_cols=52 Identities=13% Similarity=0.242 Sum_probs=36.3
Q ss_pred CCceEEEEEEEecCCCCCCceEEEE-EccC---C------------------CceEEeEEEEeecCCCceEEEEecc
Q 003685 28 TAVETLFTITFDWDEAMGVPGAFII-RNHH---H------------------SQFYLKTVTLEDVPGHGRIHFVCNS 82 (803)
Q Consensus 28 ~~~~~~y~v~f~~~~~fG~pgai~v-~n~~---~------------------~ewf~~~i~v~~~p~~~~~~Fpc~s 82 (803)
+|.+.+|-|. .+.++|+.-.|.+ ++.. . ...+++.|+|+...++..+.| |.+
T Consensus 46 ~G~t~sfLi~--t~~dlG~L~~vk~~W~~n~~~~~sW~~~~~~~~~~~~~~~p~l~~~~I~Vk~GEtq~~~~F-C~~ 119 (137)
T cd01758 46 GNKTNSFLIT--TEKDIGDLLMLKLKWEGSSLWSNSWWTVQTIIPWSGWWRGSGLTIRKIRVKAGETQKKMTF-CAE 119 (137)
T ss_pred CCCeEEEEEE--CCCCcCCEEEEEEEEeCCCCCChhhhccccccccccccCCCeEEEEEEEEEeCCCccEEEE-CCC
Confidence 5888888887 6899999999998 5332 2 233488999974555555555 655
No 19
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=32.04 E-value=36 Score=36.36 Aligned_cols=24 Identities=29% Similarity=0.731 Sum_probs=20.1
Q ss_pred HHHHHHHhhhhcCCCccccCChhHHHHHHH
Q 003685 582 ETWVKEYCSFYYPRDHLIQGDNELQSWWEE 611 (803)
Q Consensus 582 ~~fV~~~v~~yY~~D~~V~~D~ELQaW~~E 611 (803)
.+||..||..|| ..+.|+..|+++
T Consensus 178 ~~~Ve~YIKAyY------l~e~e~~~W~~~ 201 (234)
T PF10474_consen 178 REYVENYIKAYY------LPEEELEEWIRT 201 (234)
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHh
Confidence 479999999999 335689999986
No 20
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=30.16 E-value=1.7e+02 Score=34.13 Aligned_cols=111 Identities=23% Similarity=0.249 Sum_probs=71.1
Q ss_pred hHHHHHHhccCCCcCchhhcccccccccccchHHHH--------------HhcccCCccccccccchhHHHHHHHHHhcc
Q 003685 468 EPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALAR--------------QILINAGGVLENTVFPAKYAMEMSAVSYKN 533 (803)
Q Consensus 468 Epf~vAt~RqLs~~HPv~kLL~PH~r~tl~IN~~Ar--------------~~LI~~gG~id~~~~~g~~~~el~~~~y~~ 533 (803)
+-+.+|..+|=|..-=+..+|.|--..++.||+.=. ..=|+.=|++.-.-.++.+..||...+-
T Consensus 91 ~~L~~A~q~qKPds~elad~LkPI~e~i~eI~~fkE~nRkS~~FNhLsav~e~i~algWVav~~tP~p~vke~~daa~-- 168 (480)
T KOG2675|consen 91 AFLWVASQKQKPDSNELADLLKPINEEIGEINNFKEKNRKSPFFNHLSAVSESIPALGWVAVKPTPAPYVKEFKDAAQ-- 168 (480)
T ss_pred HHHHHHHhccCCChHHHHHHhhhHHHhhhHHhhhhhcccCchHHHHHHHHHhhcccceeEecCCCCchHHHHHHHHHH--
Confidence 456788888889888899999999999999987522 2223444555444455555444432220
Q ss_pred cccCCCCcchHHhh-cCCCCCCCCCCcccccCCCCCccchhhHHHHHHHHHHHHHHhhhhcCCCccccCChhHHHHHHHH
Q 003685 534 WVFTEQALPADLLK-RGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEEL 612 (803)
Q Consensus 534 w~f~~~~lP~dL~~-RG~~~~d~~~~~g~~l~lp~YpYrdDgl~iW~AI~~fV~~~v~~yY~~D~~V~~D~ELQaW~~Ei 612 (803)
.+.-.-|+. ||.|+ .- -+||+.|+.+| .|||++++|-
T Consensus 169 -----FY~NrvLkEyk~~D~----------------------~h-----veWvKa~l~l~----------~eL~~YVk~h 206 (480)
T KOG2675|consen 169 -----FYTNRVLKEYKEKDP----------------------RH-----VEWVKAYLALF----------LELQAYVKEH 206 (480)
T ss_pred -----HHHHHHHHHhccCCh----------------------hH-----HHHHHHHHHHH----------HHHHHHHHHh
Confidence 011111211 33321 11 16999999999 6899999999
Q ss_pred HhccCCCCCC
Q 003685 613 RNVGHGDKRD 622 (803)
Q Consensus 613 ~~~G~~~~~~ 622 (803)
.+-|....++
T Consensus 207 htTGl~W~~~ 216 (480)
T KOG2675|consen 207 HTTGLVWNKD 216 (480)
T ss_pred ccccceecCC
Confidence 9988866555
No 21
>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.
Probab=24.84 E-value=1.2e+02 Score=30.00 Aligned_cols=127 Identities=19% Similarity=0.164 Sum_probs=71.1
Q ss_pred ccccCChhHHHHHHHHHhccCCCCCCCCCCC-CCCCHHHHHHHHhhhhhhccchhhhhccCCcccccccCCCcccccCCC
Q 003685 597 HLIQGDNELQSWWEELRNVGHGDKRDEPWWP-EMQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFM 675 (803)
Q Consensus 597 ~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p-~~~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~ 675 (803)
+-|.+|++|..++.++.++ .....+-.|.| .+++.++|..++-.||-+|-.... ...+-..-|+.=|+= +-.|+
T Consensus 10 ~lIe~dp~l~ml~~~Mf~q-~~~~~~p~g~~~~i~~~~~mL~~ln~i~t~AP~~~~--~~~~~glvG~P~nai--LdwpM 84 (141)
T PF12588_consen 10 DLIESDPRLYMLFTQMFDQ-PPYNADPTGNPPQIRDYDEMLQLLNHIMTTAPEFSD--ANEPVGLVGFPMNAI--LDWPM 84 (141)
T ss_pred HHHhcCHHHHHHHHHHHhC-cccccCCCCCccccccHHHHHHHHHHHHhhCCcccc--cCCCCCccccChHHH--HHhhc
Confidence 3467899999999999987 22223334667 799999999999999965443322 001122333322221 11222
Q ss_pred CCCCChhhhhhhcCchHHHHhhcccHHHHHHHHHH--HHHhccCCCCcccccCcCCCCCCCChHHHHHH
Q 003685 676 PEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSL--IEILSRHSTDEVYLGQRDTPEWTLDNEPLAAF 742 (803)
Q Consensus 676 P~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~--~~lLS~~~~de~~LG~~~~~~~~~d~~~~~a~ 742 (803)
- +..+| ..|+ -|...+.+..+.- ...|++..+. ..|..-+..-|++ +.+++.+
T Consensus 85 ~--T~sG~--------a~F~--~p~vN~~lK~ILn~W~~fL~sp~S~-~vL~~~~~~GWfs-~~A~~~l 139 (141)
T PF12588_consen 85 G--TPSGY--------AFFL--DPDVNAQLKKILNEWGEFLSSPASR-SVLNTDPPNGWFS-PEALKEL 139 (141)
T ss_pred c--ChHHH--------HHHc--CHHHHHHHHHHHHHHHHHcCChhhh-ccccCCCCCCccC-HHHHHHh
Confidence 2 22234 2222 2455555655554 3467665443 3466653357998 5555544
Done!