Query         003685
Match_columns 803
No_of_seqs    203 out of 681
Neff          6.0 
Searched_HMMs 29240
Date          Tue Mar 26 17:41:16 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/003685.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1736-1740//hhsearch_pdb/003685hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2iuk_A SEED lipoxygenase; iron   1.0       1       1 1913.9  57.5  783    5-803    78-864 (864)
  2 2iuj_A Lipoxygenase L-5; dioxy   1.0       1       1 1900.4  58.5  784    5-803    67-853 (853)
  3 1f8n_A Lipoxygenase-1; dioxyge   1.0       1       1 1883.1  55.5  784    5-803    52-839 (839)
  4 1lox_A 15-lipoxygenase, 15LOX;   1.0       1       1 1353.9  40.5  613   23-803    39-662 (662)
  5 3v98_A Arachidonate 5-lipoxyge   1.0       1       1 1342.2  52.6  630    8-803    50-691 (691)
  6 3dy5_A Allene oxide synthase-l   1.0       1       1 1339.8  48.3  633    8-803   402-1066(1066)
  7 3fg1_A Allene oxide synthase-l   1.0       1       1 1332.8  49.7  632    7-803    34-696 (696)
  8 3vf1_A 11R-lipoxygenase; LOX,    1.0       1       1 1323.0  49.2  629    6-803    46-698 (698)
  9 3rde_A Arachidonate 12-lipoxyg   1.0       1       1 1247.9  31.1  553   92-803    15-573 (573)
 10 3d3l_A Arachidonate 12-lipoxyg   1.0       1       1 1117.8  26.0  492  204-803    13-509 (541)

No 1  
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max}
Probab=1.00  E-value=1  Score=1913.87  Aligned_cols=783  Identities=60%  Similarity=1.051  Sum_probs=748.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEECCCC
Q ss_conf             78886346400122222235778873489999971379999853999970699953774899822599826999706420
Q 003685            5 NELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWV   84 (803)
Q Consensus         5 ~~~~g~~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~ewfl~~i~v~~~p~~~~~~Fpc~sWV   84 (803)
                      .+|+|++|+++.|++|........+++++|+++|.|+++||+||||.|+|.|.+||||++|+|+.+|+++.++|+|||||
T Consensus        78 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv  157 (864)
T 2iuk_A           78 GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWV  157 (864)
T ss_dssp             SSSCEEEEEEEECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCCEEEEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCC
T ss_conf             99987678756001435689868777279999998405679863599883798714898899813789986898537630


Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             28987866335412760065899957699899999976359988754457256313446799999999876556899988
Q 003685           85 YPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQE  164 (803)
Q Consensus        85 ~~~~~~~~~r~ff~~~~~Lp~~t~~~L~~~R~~EL~~~rg~g~g~rk~~driY~y~~yndlG~p~~~~~~~rpvlgg~~~  164 (803)
                      ++.+.++.+|+||+|++|||++||++|+++|++||+++||||+||||+||||||||||||||+||++++  |||||||++
T Consensus       158 ~~~~~~~~~RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--rpvlggs~~  235 (864)
T 2iuk_A          158 YNFRSYKKNRIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--RPILGGCSI  235 (864)
T ss_dssp             CBGGGSSSCEEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--CCCBSSSSS
T ss_pred             CCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC--CCCCCCCCC
T ss_conf             678889988466268874864476889999999999853789876650463010345403789666888--863689888


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCH
Q ss_conf             98777677899999999999866676788764698986584421014532689988755555642114---788998998
Q 003685          165 YPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD---KTINEFDSF  241 (803)
Q Consensus       165 ~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~~lP~de~f~~~k~~~f~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~  241 (803)
                      |||||||||||+|+++||.+|+|+     .+||||||+|++.|.++|.++.++++++.++|.++++++   .+..+|++|
T Consensus       236 ~pyPrR~rtgr~~~~~dp~~e~~~-----~~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~~f~sf  310 (864)
T 2iuk_A          236 YPYPLRVRTGRERTRTDPNSEKPG-----EVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSSEFESF  310 (864)
T ss_dssp             SCCCCEECCCCCBCSSCTTSBCCC-----CCCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCSSCCSH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf             889865557989888898744546-----677898756572238888788899999877999998841235676778999


Q ss_pred             HHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf             99987502897789971001110136057888865135754334688701020012566949999988608996320024
Q 003685          242 DDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRL  321 (803)
Q Consensus       242 ~d~~~ly~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~W~~D~~Fg~Q~LaG~NP~~I~r~  321 (803)
                      +||++||++++++|+    +.+++.+|+++++++.+++.+.++|||+|++++++.++|++|++||||+|||+||++|+||
T Consensus       311 ~di~~ly~~g~~l~~----~~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~  386 (864)
T 2iuk_A          311 EDVRSLYEGGIKLPT----DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRL  386 (864)
T ss_dssp             HHHHTTTSSCEECCH----HHHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSSSCSCCEEC
T ss_pred             HHHHHHHHCCCCCCH----HHHCCCCCHHHHHHHHHCCCCCHHCCCCCCEECCCCHHHHCHHHHHHHHHCCCCCHHHHHH
T ss_conf             999999855666713----4421347499999986403310002799642025501111649999998618895554300


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCHHHHCCCCCCC-CCCCCCEEEEECCC
Q ss_conf             56999999997455888876647789730387789999664965585265321012110368997-43224037843389
Q 003685          322 QEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNT-KTYASRTLLLLQND  400 (803)
Q Consensus       322 ~~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~g~tl~~al~~grLFi~Dy~~~~l~~l~~i~~~~~-~~~Ap~~Lff~~~~  400 (803)
                      ++||++++||+++||++.|+||++||+..|+|+||++|+++|||||+||||.+||++.++|..++ +.|||+||||++++
T Consensus       387 ~e~P~~s~ldp~~yg~~~s~it~e~i~~~l~g~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~~Lffl~~d  466 (864)
T 2iuk_A          387 QEFPPKSTLDPTLYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDD  466 (864)
T ss_dssp             SSSSCCCCSCHHHHCCCCCCCCHHHHGGGTTTCCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEEEEEEEECTT
T ss_pred             HCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCEEEECCHHHHCCCHHHCCCCCCCEEECCEEEEEECCC
T ss_conf             10697344775441785563679999611378769999866987995450430641132156788620235578998689


Q ss_pred             CCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCC
Q ss_conf             95336899833899999999998824308999999915799999998210025688886521000346899987124787
Q 003685          401 GTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSV  480 (803)
Q Consensus       401 g~L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WlLAK~~v~~aD~~~Hq~isHll~THlv~Epf~iAt~RqLs~  480 (803)
                      |+|+||||||++++..++..++.++||||+|+++++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.
T Consensus       467 G~L~PlAIqLs~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~  546 (864)
T 2iuk_A          467 GTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSV  546 (864)
T ss_dssp             SCEEEEEEEEEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCT
T ss_pred             CCEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             97767999952798876666778885898887777418999999999888899999886620257889999997124886


Q ss_pred             CCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf             57511203421010001049998713258950101225536799999998505545877762578636999999999866
Q 003685          481 LHPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHG  560 (803)
Q Consensus       481 ~HPI~kLL~PH~r~tl~IN~~AR~~LI~~gG~id~~~~~g~~~~el~~~~y~~w~f~~~~lP~dL~~RG~~~~d~~~~~g  560 (803)
                      +|||||||.||||+||+||++||+.||+++|++|+++++|+++++|++++|+.|+|++++||+||++|||+++|++++||
T Consensus       547 ~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~elss~ayk~w~f~~~~LP~DL~~RGva~~D~~~p~g  626 (864)
T 2iuk_A          547 LHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKNWVFTHQALPADLVKRGLAIEDPSAPHG  626 (864)
T ss_dssp             TCHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTTCCGGGSSHHHHHHHTTSEEECSSSTTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
T ss_conf             57367765788887888789999734088871122126761079999999735777403384888856987777666654


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             33577799550212999999999999984630688844257946899999997406898889999988798788999875
Q 003685          561 IKLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCT  640 (803)
Q Consensus       561 ~~l~lp~YpYrdDgL~iW~AI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p~~~t~~~Lv~~lT  640 (803)
                      +++.||+||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+|+++||++||
T Consensus       627 l~l~ipdYpYadDGL~iW~AIk~~V~~yV~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT  706 (864)
T 2iuk_A          627 LRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCS  706 (864)
T ss_dssp             EEESSSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTTGGGTTCTTCCCSSSHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             11247788754027999999999999999987588122037899999999997257887777888877677999999865


Q ss_pred             HHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf             65310110011002698532312599843246789999992456521191689984036079899899999773157898
Q 003685          641 IIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTD  720 (803)
Q Consensus       641 ~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~d  720 (803)
                      +|||+||+||||||||||+|+||+||+|++||+|||++|+.+++++..+|++++|++||++.||+.+|+++|+||+|++|
T Consensus       707 ~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~r~p~P~~G~~~~~~l~~~pe~~~L~tLP~~~qa~~~m~l~~lLS~h~~d  786 (864)
T 2iuk_A          707 IIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVIEILSRHASD  786 (864)
T ss_dssp             HHHHHHTHHHHHHHTTHHHHHTSTTTSCCCCCSCCCCTTSHHHHHHHHCHHHHHHTTSCCHHHHHHHHHHHHHHTCCCSS
T ss_pred             EEEECCCCHHHHHCCCCCHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf             23230441245440263212144678975556789999854476653170999988688999999999999998427888


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             53456768999988948999999999999999999998717844223478866662001568988888898766866753
Q 003685          721 EVYLGQRDTPEWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNS  800 (803)
Q Consensus       721 e~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P~~~~~~~~~g~t~~gIpnS  800 (803)
                      |+|||+|+...|++|+++++|+++|+++|++||+.|++||++++||||+|++++||+||+|++     ++||||||||||
T Consensus       787 e~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s-----~~g~t~~~IPNS  861 (864)
T 2iuk_A          787 EIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSS-----EEGLTFKGIPNS  861 (864)
T ss_dssp             CCBTTCCSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCC-----CSSSCSCCCBSS
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCC-----CCCCCCCCCCCC
T ss_conf             531466676222358789999999999999999999998668123204788787710048888-----788665787873


Q ss_pred             CCC
Q ss_conf             349
Q 003685          801 VSI  803 (803)
Q Consensus       801 isI  803 (803)
                      |||
T Consensus       862 IsI  864 (864)
T 2iuk_A          862 ISI  864 (864)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             569


No 2  
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}
Probab=1.00  E-value=1  Score=1900.45  Aligned_cols=784  Identities=60%  Similarity=1.081  Sum_probs=747.8

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEECCCC
Q ss_conf             78886346400122222235778873489999971379999853999970699953774899822599826999706420
Q 003685            5 NELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWV   84 (803)
Q Consensus         5 ~~~~g~~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~ewfl~~i~v~~~p~~~~~~Fpc~sWV   84 (803)
                      .+|+||+|+++.|++|.. .....+++++|+|+|.|+++||+||||+|+|.|.+||||++|+|+.+|+++.++|||||||
T Consensus        67 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~f~~~~~~G~~gav~v~n~~~~e~fl~~i~l~~~p~~g~~~F~c~sWv  145 (853)
T 2iuj_A           67 DGGKGKVGKATNLRGKIT-LPTIGAKEEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWV  145 (853)
T ss_dssp             SSSSEEEEEEEECCCCCC-CSSCCTTEEEEEEEEECCSSSCCEEEEEEEECSSSCEEEEEEEECCCTTSCCEEEEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCC-CCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCEEEEECCCC
T ss_conf             999966687660014457-8878778458999742444579725999982688500576899920589973898705533


Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             28987866335412760065899957699899999976359988754457256313446799999999876556899988
Q 003685           85 YPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQE  164 (803)
Q Consensus        85 ~~~~~~~~~r~ff~~~~~Lp~~t~~~L~~~R~~EL~~~rg~g~g~rk~~driY~y~~yndlG~p~~~~~~~rpvlgg~~~  164 (803)
                      ++.+.++.+|+||+|++|||++||++|+++|++||+++||||+||||+||||||||+|||||+||++++++||||||| +
T Consensus       146 ~~~~~~~~~riff~n~~ylp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlg~pd~~~~~~rpvlgGs-~  224 (853)
T 2iuj_A          146 YNSKHYKTDRIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEKYARPVLGGS-A  224 (853)
T ss_dssp             CBTTSCSSCEEEECSCCCCGGGSCTTTHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCCGGGCTTSCCCCBSSS-S
T ss_pred             CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-C
T ss_conf             578789887599727866756688889999999999952789765454560565111035888766754357545898-7


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCHH
Q ss_conf             9877767789999999999986667678876469898658442101453268998875555564211--47889989989
Q 003685          165 YPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLC--DKTINEFDSFD  242 (803)
Q Consensus       165 ~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~~lP~de~f~~~k~~~f~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~  242 (803)
                      +||||||||||+++++|+.+|+|+.    .+||||||+|++.|..+|.++.++++++.++|.+++++  +.+..+|++|+
T Consensus       225 ~Pyprr~rtgr~~~~~d~~~e~~~~----~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~~f~~f~  300 (853)
T 2iuj_A          225 LPYPRRGRTGRGKTRKDPNSEKPGD----FVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDFDNFA  300 (853)
T ss_dssp             SCCCCEECCCCCBCSSCTTSBCCCS----SCCCCGGGSCCCSSGGGCHHHHHHHHHTTHHHHHHHHHHTTSSCSSCCSHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
T ss_conf             9887655579997667865446666----788897655462127778787899999876999988850567767789999


Q ss_pred             HHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99875028977899710011101360578888651357543346887010200125669499999886089963200245
Q 003685          243 DVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQ  322 (803)
Q Consensus       243 d~~~ly~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~W~~D~~Fg~Q~LaG~NP~~I~r~~  322 (803)
                      ||++||++++++|+    +.+++.+|+++++++..+++++++|||.|++++.++++|++|++||||+|||+||++|+||+
T Consensus       301 di~~ly~~g~~l~~----~~~~~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~  376 (853)
T 2iuj_A          301 EVRKLYEGGVTLPT----NFLSNITPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIE  376 (853)
T ss_dssp             HHHHHHHHCCCCCH----HHHHHSCCCTTSSTTTTCCSSSCCCCCCCGGGTSCTTTTTSHHHHHHTTTSSSSTTCCEECC
T ss_pred             HHHHHHHCCCCCCH----HHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHCHHHHHHHHHCCCCCHHEEECC
T ss_conf             99998754566704----44303483999998752243100138997434146121116299999986288961112420


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             69999999974558888766477897303877899996649655852653210121103689974322403784338995
Q 003685          323 EFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNTKTYASRTLLLLQNDGT  402 (803)
Q Consensus       323 ~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~g~tl~~al~~grLFi~Dy~~~~l~~l~~i~~~~~~~~Ap~~Lff~~~~g~  402 (803)
                      +||++++||+++||++.|+||++||+..++|+||++|+++|||||+||+|++||++++||..++++|||+||||++++|+
T Consensus       377 e~P~~~~ldp~~yg~~~s~it~e~i~~~l~g~tl~~al~~grLFi~Dy~d~~lp~~~~in~~~~~~yAp~~Lffl~~dG~  456 (853)
T 2iuj_A          377 EFPLSSKLDTQAYGDHTCIITKEHLEPNLGGLTVEQAIQNKKLFILDHHDYLIPYLRKINANTTKTYATRTIFFLKNDGT  456 (853)
T ss_dssp             SSSCCCCSCTTTTCCCCCCCCTTTTSCSSCCSCHHHHHHTTCEEECCCSTTTGGGHHHHHTSSCCCCBCCEEEEECTTSC
T ss_pred             CCCCCCCCCHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCEEEECCHHHHCCHHHCCCCCCCEEECCEEEEEECCCCC
T ss_conf             06863447754418755646799986103787699997659989951446526201025888867644567999879996


Q ss_pred             EEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCC
Q ss_conf             33689983389999999999882430899999991579999999821002568888652100034689998712478757
Q 003685          403 LKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLH  482 (803)
Q Consensus       403 L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WlLAK~~v~~aD~~~Hq~isHll~THlv~Epf~iAt~RqLs~~H  482 (803)
                      |+||||||++++..++..++.++||||+|+++++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|
T Consensus       457 L~PlAIqL~~~~~~~~~~~~~~~VftP~dd~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~H  536 (853)
T 2iuj_A          457 LTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIATNRHLSVVH  536 (853)
T ss_dssp             EEEEEEEEEECCTTCGGGCCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTC
T ss_pred             EEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             75799996469987765667787589888777750899999999988888999987551025778999999722488668


Q ss_pred             CHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf             51120342101000104999871325895010122553679999999850554587776257863699999999986633
Q 003685          483 PIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHGIK  562 (803)
Q Consensus       483 PI~kLL~PH~r~tl~IN~~AR~~LI~~gG~id~~~~~g~~~~el~~~~y~~w~f~~~~lP~dL~~RG~~~~d~~~~~g~~  562 (803)
                      ||||||.||||+||+||++||+.||++||++|++|++|+++++|++++|+.|+|++++||+||++|||+++|+++|||++
T Consensus       537 PI~kLL~PH~r~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~el~s~~yk~w~f~~~~LP~DL~~RGv~~~D~~~p~gl~  616 (853)
T 2iuj_A          537 PIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSLEMSAVIYKDWVFTDQALPNDLVKRGVAVKDPSAPHGVR  616 (853)
T ss_dssp             HHHHHHGGGGTTHHHHHHHHHHHTSSTTCHHHHHSTTGGGHHHHHHHHHTTCCSGGGSHHHHHHHHTSEEECTTSTTSEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
T ss_conf             41655368888688888999974318887500202576006999999971577742448588885698777777765300


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             57779955021299999999999998463068884425794689999999740689888999998879878899987565
Q 003685          563 LLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTII  642 (803)
Q Consensus       563 l~lp~YpYrdDgL~iW~AI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p~~~t~~~Lv~~lT~i  642 (803)
                      |.||+||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+++|+++||++||+|
T Consensus       617 l~i~dYpYadDgL~iW~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~~eLi~~lT~i  696 (853)
T 2iuj_A          617 LLIEDYPYASDGLEIWDAIKSWVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEASATL  696 (853)
T ss_dssp             ESSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHTTCHHHHHHHHHHHHTTTGGGTTCTTSCCSCSHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEE
T ss_conf             13667876412799999999999999998648811015888999999999815777766678887766799999886455


Q ss_pred             HHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             31011001100269853231259984324678999999245652119168998403607989989999977315789853
Q 003685          643 IWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEV  722 (803)
Q Consensus       643 If~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~de~  722 (803)
                      ||+||+||||||||||+|+||+||+|++||+|||++|+.+++++..+|++++|++||++.||+.+|+++|+||+|++||+
T Consensus       697 If~aSaqHAAVNfgQydy~gfvPN~P~~~r~p~P~~g~~~~~~l~~~~e~~~L~tLP~~~qa~~~m~l~~lLS~~~~de~  776 (853)
T 2iuj_A          697 IWIASALHAAVNFGQYPYGGLILNRPTISRRFMPEKGSPEYDALAKNPEKEFLKTITGKKETLIDLTIIEILSRHASDEF  776 (853)
T ss_dssp             HHHHHHHHHHHHTTSHHHHSSTTTSCCCBCSCCCCSSCHHHHHHHHCHHHHHHTTBCCHHHHHHHHHHHHHTTCBCTTCC
T ss_pred             EECCCCHHHHHCCCCCCHHCCCCCCCHHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             34244214544037440004467887554679999984336655317099998868879999999999999737998865


Q ss_pred             CCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             45676899-99889489999999999999999999987178442234788666620015689888888987668667533
Q 003685          723 YLGQRDTP-EWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNSV  801 (803)
Q Consensus       723 ~LG~~~~~-~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P~~~~~~~~~g~t~~gIpnSi  801 (803)
                      |||+|+.. .|++|+++++|+++|+++|++||+.|++||++++||||+|++++||+||+|++     +||||||||||||
T Consensus       777 yLG~~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P~s-----~~g~t~~~IPNSI  851 (853)
T 2iuj_A          777 YLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPYTLLYPSS-----EEGLTFRGIPNSI  851 (853)
T ss_dssp             BTTTCSSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCGGGTTTTTCCCCTTCSCC-----CSBSCSCCCBSSC
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCC-----CCCCCCCCCCCCC
T ss_conf             15655763112368789999999999999999999998568033224788888813568888-----7886657878735


Q ss_pred             CC
Q ss_conf             49
Q 003685          802 SI  803 (803)
Q Consensus       802 sI  803 (803)
                      ||
T Consensus       852 sI  853 (853)
T 2iuj_A          852 SI  853 (853)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             69


No 3  
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ...
Probab=1.00  E-value=1  Score=1883.08  Aligned_cols=784  Identities=61%  Similarity=1.066  Sum_probs=748.7

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEECCCC
Q ss_conf             78886346400122222235778873489999971379999853999970699953774899822599826999706420
Q 003685            5 NELRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHHSQFYLKTVTLEDVPGHGRIHFVCNSWV   84 (803)
Q Consensus         5 ~~~~g~~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~~ewfl~~i~v~~~p~~~~~~Fpc~sWV   84 (803)
                      .+|+||+|+++.|++|........+++++|+|+|.|+++||+||||.|+|.|.+||||++|+|++.|+++.++|+|||||
T Consensus        52 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pga~~v~n~~~~e~~l~~~~l~~~~~~~~~~f~cnswv  131 (839)
T 1f8n_A           52 AHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWV  131 (839)
T ss_dssp             TTSSEEECCCEECCEEECCCSCCCTTCEEEEEEEECCGGGCCEEEEEEEECSSSCEEEEEEEECC----CCEEEEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCEEEECCCCC
T ss_conf             89987678755002435689867777169999998414669850699883798714898999804788875898616641


Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             28987866335412760065899957699899999976359988754457256313446799999999876556899988
Q 003685           85 YPTHRYKYDRVFFSNKTYLPCQTPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQE  164 (803)
Q Consensus        85 ~~~~~~~~~r~ff~~~~~Lp~~t~~~L~~~R~~EL~~~rg~g~g~rk~~driY~y~~yndlG~p~~~~~~~rpvlgg~~~  164 (803)
                      ++.+.++.+|+||+|++|||++||++|+++|++||+.+||||+||||+||||||||+|||||+||++++++|||||||++
T Consensus       132 ~~~~~~~~~riff~n~~ylp~~tp~~l~~~r~~el~~lrG~g~G~rk~~driYdyd~ynDlg~pd~~~~~~rpvlggs~~  211 (839)
T 1f8n_A          132 YNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSST  211 (839)
T ss_dssp             CBGGGCSSCEEEECSCCCCGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSS
T ss_pred             CCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             77878988727525862067789667776669999984068865113312010043431456877674435653589988


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCHH
Q ss_conf             98777677899999999999866676788764698986584421014532689988755555642114--7889989989
Q 003685          165 YPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCD--KTINEFDSFD  242 (803)
Q Consensus       165 ~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~~lP~de~f~~~k~~~f~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~  242 (803)
                      +||||||||||+++++||.+|+|+.    .+||||||+|++.|.++|.+..++++++.++|.++++++  .+..+|++|+
T Consensus       212 ~Pyprr~rtgr~~~~~d~~~e~~~~----~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~~f~~f~  287 (839)
T 1f8n_A          212 FPYPRRGRTGRGPTVTDPNTEKQGE----VFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQ  287 (839)
T ss_dssp             SCCCCEECCCCCBCSSCTTSBCCCS----SCCCCGGGSCCCSSGGGCGGGHHHHHHHTHHHHHHHHHHTTCSCSSCCSHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf             8888745569998788998667765----778898645573206668888999999876888887741556666667899


Q ss_pred             HHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99875028977899710011101360578888651357543346887010200125669499999886089963200245
Q 003685          243 DVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQ  322 (803)
Q Consensus       243 d~~~ly~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~W~~D~~Fg~Q~LaG~NP~~I~r~~  322 (803)
                      ||++||+.|+++++    +.+++.+|+++++++..++++.++|||+|++++++.++|++|++||||+|||+||++|+||+
T Consensus       288 di~~ly~~g~~l~~----~~~~~~~p~~~~~~i~~~~~~~~l~~p~P~vi~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~  363 (839)
T 1f8n_A          288 DVHDLYEGGIKLPR----DVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLE  363 (839)
T ss_dssp             HHHGGGTTCEECCH----HHHHHHTTSTTGGGSCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSCSCCEECC
T ss_pred             HHHHHHHCCCCCCH----HHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHCHHHHHHHHHHCCCCHHHEECC
T ss_conf             99977643676704----55402372889999874154210038985110045121116799999987089964300531


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCHHHHCCCCCCC-CCCCCCEEEEECCCC
Q ss_conf             6999999997455888876647789730387789999664965585265321012110368997-432240378433899
Q 003685          323 EFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTNT-KTYASRTLLLLQNDG  401 (803)
Q Consensus       323 ~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~g~tl~~al~~grLFi~Dy~~~~l~~l~~i~~~~~-~~~Ap~~Lff~~~~g  401 (803)
                      +||++++||+++||+++|+||++|++  ++|+||++|+++|||||+||+|.+|||+.++|...+ +.|||+||||++++|
T Consensus       364 e~P~~~~ldp~~yg~~~s~it~e~i~--l~g~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~tLffl~~dg  441 (839)
T 1f8n_A          364 EFPPKSNLDPAIYGDQSSKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDG  441 (839)
T ss_dssp             SSSCCCCSCHHHHCCCCCCCCGGGCC--CTTCCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTS
T ss_pred             CCCCCCCCCHHHCCCCCCCCCHHHHH--CCCCCHHHHHHCCCEEEECCHHHHCCCHHHCCCCCCCEEECCEEEEEECCCC
T ss_conf             17973447765508855634288863--1675399998659989941515425302321557895313355789987899


Q ss_pred             CEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC
Q ss_conf             53368998338999999999988243089999999157999999982100256888865210003468999871247875
Q 003685          402 TLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVL  481 (803)
Q Consensus       402 ~L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WlLAK~~v~~aD~~~Hq~isHll~THlv~Epf~iAt~RqLs~~  481 (803)
                      +|+||||||++++..++..++.++||||+|+++++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+
T Consensus       442 ~L~PlAIqL~~~~~~~~~~~~~~~vftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~IAt~RqLs~~  521 (839)
T 1f8n_A          442 TLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVL  521 (839)
T ss_dssp             CEEEEEEEEECCCCTTCSCCCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTT
T ss_pred             CEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             77679999647998776567778858988777776089999999998888999998866303577899999971138865


Q ss_pred             CCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf             75112034210100010499987132589501012255367999999985055458777625786369999999998663
Q 003685          482 HPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPAKYAMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHGI  561 (803)
Q Consensus       482 HPI~kLL~PH~r~tl~IN~~AR~~LI~~gG~id~~~~~g~~~~el~~~~y~~w~f~~~~lP~dL~~RG~~~~d~~~~~g~  561 (803)
                      |||||||.||||+||+||++||+.||++||++|++|++|+++++|++++|+.|+|++++||+||++|||+++|++++||+
T Consensus       522 HPI~kLL~PH~r~Tl~IN~~AR~~LI~~gGiie~~fs~g~~~~el~s~~yk~w~f~~~~lP~DL~~RG~~~~D~~~p~gl  601 (839)
T 1f8n_A          522 HPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGV  601 (839)
T ss_dssp             CHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTTCCGGGGSHHHHHHHTTSEEECTTSTTSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf             84677777999999888899997331888712232057610699999997257773133848888669877777776540


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             35777995502129999999999999846306888442579468999999974068988899999887987889998756
Q 003685          562 KLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTI  641 (803)
Q Consensus       562 ~l~lp~YpYrdDgL~iW~AI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p~~~t~~~Lv~~lT~  641 (803)
                      ++.||+||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+|+++||++||+
T Consensus       602 ~l~ipdYpYadDgL~iW~AIk~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~~Li~~lT~  681 (839)
T 1f8n_A          602 RLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLI  681 (839)
T ss_dssp             EESSTTCHHHHHHHHHHHHHHHHHHHHGGGTCCSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTCCCCCSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHE
T ss_conf             00267886420079999999999999999874980331378999999999970578777778888776679999998652


Q ss_pred             HHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             53101100110026985323125998432467899999924565211916899840360798998999997731578985
Q 003685          642 IIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDE  721 (803)
Q Consensus       642 iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~de  721 (803)
                      |||+||+||||||||||+|+||+||+|++||+|||++|+.+++++..+|++++|++||++.||+.+|+++|+||+|++||
T Consensus       682 iIf~aSaqHAAVNfgQydy~gfvPN~P~~~r~p~P~~g~~~~~~l~~~~e~~~L~tLP~~~qa~~~m~l~~lLS~~~~de  761 (839)
T 1f8n_A          682 IIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDE  761 (839)
T ss_dssp             HHHHHTHHHHHHHTTHHHHHTSTTTSCSCBCSCCCCTTSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTC
T ss_pred             EEECCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf             21214411454403745100426788766567899998544766543669999887888999999999999985279875


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             345676899998894899999999999999999999871784422-3478866662001568988888898766866753
Q 003685          722 VYLGQRDTPEWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWK-NRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNS  800 (803)
Q Consensus       722 ~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~-~r~g~~~~PY~yL~P~~~~~~~~~g~t~~gIpnS  800 (803)
                      +|||+|+...|++|+++++|+++|+++|++||+.|.+||+++++| ||+|++++||+||+|++     ++||||||||||
T Consensus       762 ~yLG~~~~~~~~~d~~~~~a~~rF~~~L~~Ie~~I~~RN~d~~lk~nr~g~~~~PY~~L~P~s-----~~g~t~~~IPNS  836 (839)
T 1f8n_A          762 VYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSS-----EEGLTFRGIPNS  836 (839)
T ss_dssp             CBTTCCSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCC-----CSBSCSCCCBSS
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCC-----CCCCCCCCCCCC
T ss_conf             335665752333587899999999999999999999986572022125788777710158888-----788665787883


Q ss_pred             CCC
Q ss_conf             349
Q 003685          801 VSI  803 (803)
Q Consensus       801 isI  803 (803)
                      |||
T Consensus       837 IsI  839 (839)
T 1f8n_A          837 ISI  839 (839)
T ss_dssp             CCC
T ss_pred             CCC
T ss_conf             579


No 4  
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*
Probab=1.00  E-value=1  Score=1353.85  Aligned_cols=613  Identities=26%  Similarity=0.411  Sum_probs=552.1

Q ss_pred             CCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCC---CCEEEEEEEEEECCC--CCEEEEEECCCCCCCCCCCCCEEEE
Q ss_conf             35778873489999971379999853999970699---953774899822599--8269997064202898786633541
Q 003685           23 TITPLTAVETLFTITFDWDEAMGVPGAFIIRNHHH---SQFYLKTVTLEDVPG--HGRIHFVCNSWVYPTHRYKYDRVFF   97 (803)
Q Consensus        23 ~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~~---~ewfl~~i~v~~~p~--~~~~~Fpc~sWV~~~~~~~~~r~ff   97 (803)
                      +|+  +|++++|.++  ++.+||++++|+|+|.+.   ++|||++|+|+. |+  |..++|||||||++     .+|+||
T Consensus        39 ~Fe--rG~~d~F~v~--~~~dlG~l~~I~I~~d~~g~~~~Wfl~~V~V~~-p~~~g~~~~F~Cn~WL~~-----~~rvff  108 (662)
T 1lox_A           39 RPT--RNKEEEFKVN--VSKYLGSLLFVRLRKKHFLKEDAWFCNWISVQA-LGAAEDKYWFPCYRWVVG-----DGVQSL  108 (662)
T ss_dssp             CCC--TTCEEEEEEE--CSSCCCSEEEEEEEEECSSSCCCEEEEEEEEEE-SSSCCCCEEEEEEEEECS-----SCCEEE
T ss_pred             CCC--CCCCCEEEEE--ECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC-CCCCCCEEEEEECEEECC-----CCEEEE
T ss_conf             737--9992189998--237788652899995899999872884899943-898995799982207557-----987997


Q ss_pred             CC-CCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             27-6006589-995769989999997635998875445725631344679999999987655689998898777677899
Q 003685           98 SN-KTYLPCQ-TPEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRRGRTGR  175 (803)
Q Consensus        98 ~~-~~~Lp~~-t~~~L~~~R~~EL~~~rg~g~g~rk~~driY~y~~yndlG~p~~~~~~~rpvlgg~~~~pyprr~rtgr  175 (803)
                      ++ ++|||++ ||++|+++|++||+++|           |+|||++||| |.|.                          
T Consensus       109 ~~G~~~Lp~~D~~~~l~~~R~~eL~~~~-----------~~Y~~~~y~d-G~p~--------------------------  150 (662)
T 1lox_A          109 PVGTGCTTVGDPQGLFQKHREQELEERR-----------KLYQWGSWKE-GLIL--------------------------  150 (662)
T ss_dssp             ECTTCCCSTTCTTCTTHHHHHHHHHHHH-----------HHSCEECSST-TSCC--------------------------
T ss_pred             ECCCEEEECCCCCHHHHHHHHHHHHHHH-----------CEEEECCCCC-CCCC--------------------------
T ss_conf             0674054025577066665399998630-----------5774067579-9965--------------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf             99999999986667678876469898658442101453268998875555564211478899899899987502897789
Q 003685          176 KPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLP  255 (803)
Q Consensus       176 ~~~~~d~~~e~~~~~~~~~~~lP~de~f~~~k~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ly~~~~~~~  255 (803)
                        +. |+.+         ..||||||+|+..|..+|..+.+++++++++   +++++. .++|++|+||+++|..+..  
T Consensus       151 --~~-d~~~---------~~~lP~de~f~~~k~~~f~~~~~~~~~~~~~---~~~~~~-~~~~~s~~d~~~lf~~~~~--  212 (662)
T 1lox_A          151 --NV-AGSK---------LTDLPVDERFLEDKKIDFEASLAWGLAELAL---KNSLNI-LAPWKTLDDFNRIFWCGRS--  212 (662)
T ss_dssp             --EE-SCSS---------GGGSCGGGSCCHHHHHHHC-----------C---HHHHGG-GSCCSSGGGGGGSC--CCC--
T ss_pred             --CC-CCCC---------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH---HHHHCC-CCCCCCHHHHHHHHHCCCC--
T ss_conf             --45-7554---------4569941023742033455656888999999---998605-7886679999987422566--


Q ss_pred             CCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             97100111013605788886513575433468870102001256694999998860899632002456999999997455
Q 003685          256 NSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVY  335 (803)
Q Consensus       256 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~W~~D~~Fg~Q~LaG~NP~~I~r~~~~P~~~~l~~~~~  335 (803)
                            .                            ++++..++|++|++||||+|||+||++|+||+++|+         
T Consensus       213 ------~----------------------------~~~~~~~~W~~D~~F~~q~L~G~NP~~I~~~~~~p~---------  249 (662)
T 1lox_A          213 ------K----------------------------LARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPA---------  249 (662)
T ss_dssp             ------H----------------------------HHHHHHHHTTCHHHHHHHHHHSSCTTSCEECSSCCT---------
T ss_pred             ------C----------------------------CCHHHHHHHCCCHHHHHHHHCCCCCHHEEECCCCCC---------
T ss_conf             ------5----------------------------303455432060999999864899620024466874---------


Q ss_pred             CCCCCCCCHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCHHHHCCCCCC---CCCCCCCEEEEECCCCCEEEEEEEECC
Q ss_conf             88887664778973038778999966496558526532101211036899---743224037843389953368998338
Q 003685          336 GNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTN---TKTYASRTLLLLQNDGTLKPLAIELSL  412 (803)
Q Consensus       336 g~~~~~vt~~~i~~~l~g~tl~~al~~grLFi~Dy~~~~l~~l~~i~~~~---~~~~Ap~~Lff~~~~g~L~PIAIqL~~  412 (803)
                         +|+||++|++   +|+||++|+++||||++||++  |+++ ++|...   .+.|||+||||++++|+|+||||||++
T Consensus       250 ---~~~vt~~~v~---~g~tl~~a~~~~~lfi~Dy~~--l~~~-~~~~~~~~~~y~~Ap~~lf~l~~~g~L~PlAIql~~  320 (662)
T 1lox_A          250 ---RLVFPPGMEE---LQAQLEKELKAGTLFEADFAL--LDNI-KANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHL  320 (662)
T ss_dssp             ---TCCCCTTCHH---HHHHHHHHHHTTCEEEEECGG--GTTC-CCCEETTEECCCCCCEEEEEECTTSCEEEEEEECSC
T ss_pred             ---CCCCCHHHHC---CCCCHHHHHHCCCEEEEECHH--HCCC-CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEC
T ss_conf             ---3679988956---787799998649889983243--3547-666557763311154699998899978679999737


Q ss_pred             CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHCCCCCC
Q ss_conf             99999999998824308999999915799999998210025688886521000346899987124787575112034210
Q 003685          413 PHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHF  492 (803)
Q Consensus       413 ~~~~~~~~~~~~~VftP~d~~~~~~~WlLAK~~v~~aD~~~Hq~isHll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~  492 (803)
                      |++.    +...+||||+|   ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.|||
T Consensus       321 p~~~----~~~~~vftP~d---~~~~W~lAK~~v~~~D~~~Hqli~Hll~TH~~~E~~~iAt~R~Ls~~HPi~kLL~PH~  393 (662)
T 1lox_A          321 PKIG----SSPPPLFLPTD---PPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHL  393 (662)
T ss_dssp             CCTT----SCCCCEECTTS---CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHCCTTSHHHHHHGGGG
T ss_pred             CCCC----CCCCCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             9887----78887687899---9638999999999778888888887645677788999986225886574124334788


Q ss_pred             CCCCCCHHHHHHHCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             100010499987132589501012255367-9999999850554587776257863699999999986633577799550
Q 003685          493 RDTMNINALARQILINAGGVLENTVFPAKY-AMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHGIKLLIEDYPYA  571 (803)
Q Consensus       493 r~tl~IN~~AR~~LI~~gG~id~~~~~g~~-~~el~~~~y~~w~f~~~~lP~dL~~RG~~~~d~~~~~g~~l~lp~YpYr  571 (803)
                      |+||+||++||+.||++||++|+++++|.+ +++|++++|++|+|++++||+||++|||.            .||+||||
T Consensus       394 r~tl~IN~~AR~~Li~~~G~i~~~~~~g~~~~~~l~~~~~~~~~f~~~~lP~dL~~RG~~------------~i~~YpY~  461 (662)
T 1lox_A          394 RYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGLL------------GVESSFYA  461 (662)
T ss_dssp             TTHHHHHHHHTTTTSSTTSHHHHHCTTTTTHHHHHHHHHHTTCCGGGGSHHHHHHHTTCT------------TCTTCHHH
T ss_pred             HHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCC------------CCCCCCCC
T ss_conf             768877799997542888711232058842289999999716754313576545646766------------56677544


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
Q ss_conf             21299999999999998463068884425794689999999740689888999998879878899987565310110011
Q 003685          572 VDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTIIIWVASALHA  651 (803)
Q Consensus       572 dDgL~iW~AI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p~~~t~~~Lv~~lT~iIf~aS~qHA  651 (803)
                      +|||+||+||++||++||++||++|++|++|.|||+||+||+++||++.++.++|++|+|+++||++||+|||+||+|||
T Consensus       462 ~Dgl~iW~aI~~~V~~yv~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~p~~l~t~~~Li~~lT~iI~~aS~~HA  541 (662)
T 1lox_A          462 QDALRLWEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHS  541 (662)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCSSHHHHHTCHHHHHHHHHHHTTTTTSGGGGTCCSSCCSHHHHHHHHHHHHHHTTHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCHHHH
T ss_conf             24899999999999999986379800024778999999999855577775689997566599999875343011212466


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             00269853231259984324678999999245652119168998403607989989999977315789853456768999
Q 003685          652 AVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEVYLGQRDTPE  731 (803)
Q Consensus       652 AVNfgQ~d~~gf~PN~P~~lr~p~P~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~de~~LG~~~~~~  731 (803)
                      |||||||+|+||+||+|++||+|||+...        .+++++|++||++.+++.+|+++|+||+|++||+|||+|+. .
T Consensus       542 AVNfgQ~~y~g~~PN~P~~~r~p~P~~k~--------~~~~~~l~~lP~~~~a~~~~~~~~~LS~~~~de~~LG~~~~-~  612 (662)
T 1lox_A          542 SIHLGQLDWFTWVPNAPCTMRLPPPTTKD--------ATLETVMATLPNLKQSSLQMSIVWQLGRDQPIMVPLGQHQE-E  612 (662)
T ss_dssp             HHHTTHHHHSSSGGGSCSCCSSCCCSSSC--------CCHHHHHHHSCCHHHHHHHHHHHHHTT--CCCCCBTTCCCC-C
T ss_pred             HHCCCCCHHCCCCCCCCHHHCCCCCCCCC--------CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-C
T ss_conf             55147310004566885332679998889--------89889988698788999999999996258877643146773-1


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             988948999999999999999999998717844223478866662001568988888898766866753349
Q 003685          732 WTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNSVSI  803 (803)
Q Consensus       732 ~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P~~~~~~~~~g~t~~gIpnSisI  803 (803)
                      |+.|+++++|+++|+++|++||+.|++||+++         ++||+||+|+.             |||||||
T Consensus       613 ~~~d~~~~~a~~~F~~~L~~ie~~I~~rN~~~---------~~PY~~L~P~~-------------ipnSisI  662 (662)
T 1lox_A          613 YFSGPEPRAVLEKFREELAIMDKEIEVRNEKL---------DIPYEYLRPSI-------------VENSVAI  662 (662)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSCCCTTCTTT-------------SBSSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------CCCCEEECCCC-------------CCCCCCC
T ss_conf             12587899999999999999999999970799---------98822479889-------------8763139


No 5  
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B
Probab=1.00  E-value=1  Score=1342.24  Aligned_cols=630  Identities=28%  Similarity=0.455  Sum_probs=566.6

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECC---CCCCEEEEEEEEEECCCCCEEEEEECCCC
Q ss_conf             863464001222222357788734899999713799998539999706---99953774899822599826999706420
Q 003685            8 RGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKTVTLEDVPGHGRIHFVCNSWV   84 (803)
Q Consensus         8 ~g~~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~ewfl~~i~v~~~p~~~~~~Fpc~sWV   84 (803)
                      +|. |....|++  +.|+  +|++++|.++  .+.++|++..|+|+..   ..+.|||+.|+|. .+.|..+.||||+|+
T Consensus        50 ~G~-S~~~~L~~--~~Fe--RG~~D~F~v~--~~~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~-~~~g~~~~Fpc~rWL  121 (691)
T 3v98_A           50 AGC-SEKHLLDK--GSFE--RGAVDSYDVT--VDEELGEIQLVRIEKRKYGSNDDWYLKYITLK-TPHGDYIEFPCYRWI  121 (691)
T ss_dssp             SCB-CCCEECCS--SCBC--TTCEEEEEEC--CSSCCCSEEEEEEEEECSSSCCCEEEEEEEEE-CTTSCEEEEEEEEEE
T ss_pred             CCC-EEEEEECC--CCCC--CCCEEEEEEE--ECCCCCCCEEEEEEECCCCCCCCEEEEEEEEE-CCCCCEEEEEHHHHC
T ss_conf             996-64388168--7635--7976599998--03677885599999789879998587079998-799958997647831


Q ss_pred             CCCCCCCCCEEEECCCCCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             28987866335412760065899-95769989999997635998875445725631344679999999987655689998
Q 003685           85 YPTHRYKYDRVFFSNKTYLPCQT-PEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQ  163 (803)
Q Consensus        85 ~~~~~~~~~r~ff~~~~~Lp~~t-~~~L~~~R~~EL~~~rg~g~g~rk~~driY~y~~yndlG~p~~~~~~~rpvlgg~~  163 (803)
                      ...++    .++++|+|+||+++ .+.|++||++||+++|.           .|+|++|.+ |.|.|       +.+.  
T Consensus       122 ~~d~~----l~l~~g~a~~~~~d~~~~~~~~R~~El~~r~~-----------~y~W~~~~~-G~p~~-------i~~~--  176 (691)
T 3v98_A          122 TGDVE----VVLRDGRAKLARDDQIHILKQHRRKELETRQK-----------QYRWMEWNP-GFPLS-------IDAK--  176 (691)
T ss_dssp             CSSSC----EEEECSSCCCGGGCCSHHHHHHHHHHHHHHHH-----------HSCEECSST-TSCCE-------ESCS--
T ss_pred             CCCCE----EEECCCCEEECCCCCCHHHHHHHHHHHHHHHH-----------HCCCCCCCC-CCCCC-------CCCC--
T ss_conf             89977----99717722501457787999999999999886-----------503788889-99651-------1557--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             89877767789999999999986667678876469898658442101453268998875555564211478899899899
Q 003685          164 EYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDD  243 (803)
Q Consensus       164 ~~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~~lP~de~f~~~k~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d  243 (803)
                                          +         ..+||+|+||++.|..+|..+..++++++.+   ++++++...+|++|+|
T Consensus       177 --------------------~---------~~~Lp~~~~f~~~k~~~f~~~~~~~~~~~~l---~~~~~~~~~~w~~l~D  224 (691)
T 3v98_A          177 --------------------C---------HKDLPRDIQFDSEKGVDFVLNYSKAMENLFI---NRFMHMFQSSWNDFAD  224 (691)
T ss_dssp             --------------------S---------GGGSCGGGSCSSSSSSCHHHHHHHHHHHTTC---GGGTTCTTCCCSSHHH
T ss_pred             --------------------C---------CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHH---CCHHHHCCCCCCCHHH
T ss_conf             --------------------6---------0018800031101020256666777776301---0035431478688999


Q ss_pred             HHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             98750289778997100111013605788886513575433468870102001256694999998860899632002456
Q 003685          244 VLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQE  323 (803)
Q Consensus       244 ~~~ly~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~W~~D~~Fg~Q~LaG~NP~~I~r~~~  323 (803)
                      |+++|+..+.        .                            +.+++.++|++|++||||+|||+||++||||++
T Consensus       225 ~~~if~~~~~--------~----------------------------~~~~v~~~W~~D~~F~~Q~LaG~NP~~I~r~~~  268 (691)
T 3v98_A          225 FEKIFVKISN--------T----------------------------ISERVMNHWQEDLMFGYQFLNGANPVLIRRCTE  268 (691)
T ss_dssp             HHHHHTTTCC--------H----------------------------HHHHHHHHTTSHHHHHHHHHHSSCTTSCEECSS
T ss_pred             HHHHHCCCCC--------C----------------------------CCHHHHHHHCCHHHHHHHHHCCCCCCEEEECCC
T ss_conf             9998178888--------8----------------------------757676650276999998864899801687256


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHCC-CCCHHHHHHCCCEEEECCCCCCCHHHHCCCC---CC-CCCCCCCEEEEEC
Q ss_conf             99999999745588887664778973038-7789999664965585265321012110368---99-7432240378433
Q 003685          324 FPPASNLDPKVYGNQHSSITRADIERNMN-ELTIDEAIENKKLFTLDHHDALMPYLRRINS---TN-TKTYASRTLLLLQ  398 (803)
Q Consensus       324 ~P~~~~l~~~~~g~~~~~vt~~~i~~~l~-g~tl~~al~~grLFi~Dy~~~~l~~l~~i~~---~~-~~~~Ap~~Lff~~  398 (803)
                      +|+            +|+||++|++..|+ |+||++|+++||||++||+  +|+++ .+|.   .+ +++|||+||||++
T Consensus       269 ~P~------------~~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~--~l~~i-~~n~~~~~~~~y~~Ap~~Lf~l~  333 (691)
T 3v98_A          269 LPE------------KLPVTTEMVECSLERQLSLEQEVQQGNIFIVDFE--LLDGI-DANKTDPCTLQFLAAPICLLYKN  333 (691)
T ss_dssp             CCT------------TCCCCHHHHTTTCCSSCCHHHHHHTTCEEEEECG--GGTTC-CCCCSCTTSCCCCCCCEEEEEEC
T ss_pred             CCC------------CCCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECH--HHCCC-CCCCCCCCCCCEECCCEEEEEEC
T ss_conf             885------------6899999998642689869999875999999424--53366-66656886342002757999986


Q ss_pred             CCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCC
Q ss_conf             89953368998338999999999988243089999999157999999982100256888865210003468999871247
Q 003685          399 NDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQL  478 (803)
Q Consensus       399 ~~g~L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WlLAK~~v~~aD~~~Hq~isHll~THlv~Epf~iAt~RqL  478 (803)
                      ++|+|+||||||+|++      ++.+|||||+|   ++|+|+|||+||++||+++||+++||++||+++|||+|||+|||
T Consensus       334 ~~g~L~PlAIqL~~~p------~~~~piftP~d---~~~~W~lAK~~v~~~D~~~Hql~~Hll~THlv~E~f~vAt~R~L  404 (691)
T 3v98_A          334 LANKIVPIAIQLNQIP------GDENPIFLPSD---AKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL  404 (691)
T ss_dssp             TTSCEEEEEEESSSSC------BTTBCEECTTS---CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEEEEEECCC------CCCCCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             8997624899961699------89897573799---95279999999974689999999886113677899999974138


Q ss_pred             CCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf             875751120342101000104999871325895010122553-6799999998505545877762578636999999999
Q 003685          479 SVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPA-KYAMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQ  557 (803)
Q Consensus       479 s~~HPI~kLL~PH~r~tl~IN~~AR~~LI~~gG~id~~~~~g-~~~~el~~~~y~~w~f~~~~lP~dL~~RG~~~~d~~~  557 (803)
                      |.+|||||||.||||+||+||++||..||++||++|+++++| +|+++|++++|++|+|++++||+||++|||+++|   
T Consensus       405 ~~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~gG~i~~~~~~g~~~~~~l~~~~~~~~~f~~~~lP~dL~~RG~~~~~---  481 (691)
T 3v98_A          405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFDKANATGGGGHVQMVQRAMKDLTYASLCFPEAIKARGMESKE---  481 (691)
T ss_dssp             CTTSHHHHHHGGGSTTHHHHHHHHHHHTSSTTCTHHHHCTTTTTHHHHHHHHHHTTCCSGGGSHHHHHHHTTCCCTT---
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC---
T ss_conf             87674677635777646421189996230899713455136720499999999844630656683779866896401---


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCHHHHH
Q ss_conf             8663357779955021299999999999998463068884425794689999999740689888999998-879878899
Q 003685          558 PHGIKLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWP-EMQTQAELV  636 (803)
Q Consensus       558 ~~g~~l~lp~YpYrdDgL~iW~AI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p-~~~t~~~Lv  636 (803)
                            .||+||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||++.++. ||| +|+|+++||
T Consensus       482 ------~l~~YpY~dDgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~-g~P~~l~T~~~Lv  554 (691)
T 3v98_A          482 ------DIPYYFYRDDGLLVWEAIRTFTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSS-GFPKSVKSREQLS  554 (691)
T ss_dssp             ------TCTTCHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHTCHHHHHHHHHHHHTTTTTCGGG-CCCSCCCSHHHHH
T ss_pred             ------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCHHHHH
T ss_conf             ------388983477799999999999999998747983674277999999999973446777555-6765678899999


Q ss_pred             HHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHC
Q ss_conf             9875653101100110026985323125998432467899-999924565211916899840360798998999997731
Q 003685          637 QTCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMP-EPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILS  715 (803)
Q Consensus       637 ~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P-~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS  715 (803)
                      ++||+|||+||+||||||||||+|+||+||+|++||+||| +||..+        ++++|++||++.+++.+|+++|+||
T Consensus       555 ~~lT~iIf~aSaqHAAVNfgQ~~y~g~~PN~P~~~r~p~P~~kg~~~--------~~~~l~~LP~~~~a~~~~~~~~~LS  626 (691)
T 3v98_A          555 EYLTVVIFTASAQHAAVNFGQYDWASWIPNAPPTMRAPPPTAKGVVT--------IEQIVDTLPDRGRSCWHLGAVWALS  626 (691)
T ss_dssp             HHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCCSSCCCCSSSCCC--------HHHHHHHSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHEEHHHCCCHHHHCCCCCCCEEEECCCCCHHHCCCCCCCCCCCC--------HHHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             88735120124033310457553020358885554689999988877--------7789877888788899999999845


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             57898534567689999889489999999999999999999987178442234788666620015689888888987668
Q 003685          716 RHSTDEVYLGQRDTPEWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGK  795 (803)
Q Consensus       716 ~~~~de~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P~~~~~~~~~g~t~~  795 (803)
                      +|++|++|||+|+. .|+.|+++++|+++|+++|++||++|++||+++         ++||+||+|+.            
T Consensus       627 ~~~~de~~LG~y~~-~~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~~------------  684 (691)
T 3v98_A          627 QFQENELFLGMYPE-EHFIEKPVKEAMARFRKNLEAIVSVIAERNENL---------QLPYYYLDPDR------------  684 (691)
T ss_dssp             CCCTTCCBTTCCCS-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------SSCCCTTCGGG------------
T ss_pred             CCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCCC------------
T ss_conf             78888744035884-112787999999999999999999999972899---------98840079889------------


Q ss_pred             CCCCCCCC
Q ss_conf             66753349
Q 003685          796 GIPNSVSI  803 (803)
Q Consensus       796 gIpnSisI  803 (803)
                       |||||||
T Consensus       685 -IpnSIsI  691 (691)
T 3v98_A          685 -IPNSVAI  691 (691)
T ss_dssp             -CBSSCCC
T ss_pred             -CCCEEEC
T ss_conf             -8764159


No 6  
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}
Probab=1.00  E-value=1  Score=1339.79  Aligned_cols=633  Identities=28%  Similarity=0.515  Sum_probs=567.0

Q ss_pred             CCCCCCCCCCCCCC-CCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCC------CCCEEEEEEEEEECCCCCEEEEEE
Q ss_conf             86346400122222-23577887348999997137999985399997069------995377489982259982699970
Q 003685            8 RGRLGKVAYLEKWI-TTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHH------HSQFYLKTVTLEDVPGHGRIHFVC   80 (803)
Q Consensus         8 ~g~~s~~~~l~~~~-~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~------~~ewfl~~i~v~~~p~~~~~~Fpc   80 (803)
                      +|. |....|++.. +.|++  |++++|.++  . .++|++..|+|++..      .+.|||++|+|+....|..+.|||
T Consensus       402 ~G~-S~~~~L~~~~~~~FeR--Gs~d~F~v~--~-~~LG~L~~IrI~hDnsG~~~~~~~Wfl~~V~V~~~~tg~~~~Fpc  475 (1066)
T 3dy5_A          402 KGR-TDYLKLDKWFHNDFEA--GSKEQYTVQ--G-FDVGDIQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVYSFPC  475 (1066)
T ss_dssp             SCB-CCCEEC-------CCT--TCEEEEEEE--C-SCCSSEEEEEEECCCCC--CCCCCEEEEEEEEEESSSSSCEEEEE
T ss_pred             CCC-EEEEEECCCCCCCCCC--CCCCEEEEE--E-ECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEEH
T ss_conf             995-5317837887675344--871269999--7-137873389999789887778997388689998389997899760


Q ss_pred             CCCCCCCCCCCCCEEEECCCCCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             642028987866335412760065899-9576998999999763599887544572563134467999999998765568
Q 003685           81 NSWVYPTHRYKYDRVFFSNKTYLPCQT-PEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVL  159 (803)
Q Consensus        81 ~sWV~~~~~~~~~r~ff~~~~~Lp~~t-~~~L~~~R~~EL~~~rg~g~g~rk~~driY~y~~yndlG~p~~~~~~~rpvl  159 (803)
                      |+|+...      .++++|+|+||+++ .+.|++||++||+++|.           .|+|+.|.+ |.|.|       +.
T Consensus       476 ~rWL~~d------~~lr~G~a~l~~~d~~p~~~~~R~~EL~~rr~-----------~Y~w~~~~~-g~p~~-------~~  530 (1066)
T 3dy5_A          476 FRWVIKD------MVLFPGEATLPFNEVPAIVSEQRQKELEQRKL-----------TYQWDYVSD-DMPGN-------IK  530 (1066)
T ss_dssp             EEEESSE------EEECCSSCCCSCSCCCHHHHHHHHHHHHHHHH-----------HSCEECSST-TSCCE-------EC
T ss_pred             HHHCCCC------EEECCCCEEECCCCCCHHHHHHHHHHHHHHHH-----------HEECCCCCC-CCCCC-------CC
T ss_conf             2405677------17536721404567776899999999998775-----------430676789-98641-------14


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             99988987776778999999999998666767887646989865844210145326899887555556421147889989
Q 003685          160 GGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFD  239 (803)
Q Consensus       160 gg~~~~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~~lP~de~f~~~k~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (803)
                      +                      ++         ..+||+|+||+..|..+|..+..++++++.+   +++++. .++|+
T Consensus       531 ~----------------------~~---------~~~LP~~~~f~~~k~~~~~~~~~~~~~~~~~---~~~~~~-~~~w~  575 (1066)
T 3dy5_A          531 A----------------------KT---------HDDLPRDVQFTDEKSRSYQESRKAALVNLGI---GSLFTM-FENWD  575 (1066)
T ss_dssp             C----------------------SS---------TTTSCGGGSCCHHHHHHHHHHHHHHHTGGGT---SCC---------
T ss_pred             C----------------------CC---------HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH---HHHHHH-CCCCC
T ss_conf             4----------------------54---------2128800030022002467777788876434---334422-03646


Q ss_pred             CHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf             98999875028977899710011101360578888651357543346887010200125669499999886089963200
Q 003685          240 SFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIIS  319 (803)
Q Consensus       240 s~~d~~~ly~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~W~~D~~Fg~Q~LaG~NP~~I~  319 (803)
                      +|+||+++|+....                                 +   +..++.++|++|++||||+|||+||++|+
T Consensus       576 ~l~d~~~~f~~~~~---------------------------------~---~~~~v~~~W~~D~~F~~Q~L~G~NP~~I~  619 (1066)
T 3dy5_A          576 SYDDYHILYRNWIL---------------------------------G---GTPNMADRWHEDRWFGYQFLNGANPVILT  619 (1066)
T ss_dssp             -----------------------------------------------------------CCSHHHHHHHHHTTSCCSSEE
T ss_pred             CHHHHHHHHCCCCC---------------------------------C---CCHHHHHHCCCHHHHHHHHHCCCCCCEEE
T ss_conf             79999998467887---------------------------------8---78778655038599999876489981378


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC-CCCHHHHHHCCCEEEECCCCC--CC----HHHHCC------CCCC-
Q ss_conf             245699999999745588887664778973038-778999966496558526532--10----121103------6899-
Q 003685          320 RLQEFPPASNLDPKVYGNQHSSITRADIERNMN-ELTIDEAIENKKLFTLDHHDA--LM----PYLRRI------NSTN-  385 (803)
Q Consensus       320 r~~~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~-g~tl~~al~~grLFi~Dy~~~--~l----~~l~~i------~~~~-  385 (803)
                      ||+++|+            +|+||++|++..|+ |+||++|+++|||||+||+++  ++    ||+++|      |..+ 
T Consensus       620 r~~~~P~------------~~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~~l~~~~~~~~p~~~~i~~~~~~n~~~~  687 (1066)
T 3dy5_A          620 RCDALPS------------NFPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHD  687 (1066)
T ss_dssp             ECSSCCT------------TCCCCTTTTTTTCCSSSCSHHHHTTSCEEEEECGGGTTCCCSSSCCCCTTC----------
T ss_pred             ECCCCCC------------CCCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf             7234674------------5678889998650689879999875999999645543324345520100022234454577


Q ss_pred             ----CCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             ----7432240378433899533689983389999999999882430899999991579999999821002568888652
Q 003685          386 ----TKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWL  461 (803)
Q Consensus       386 ----~~~~Ap~~Lff~~~~g~L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WlLAK~~v~~aD~~~Hq~isHll  461 (803)
                          +++|||+||||++++|+|+||||||+|++      ++.++||||+|+  ++|+|+|||+||++||+++||+++||+
T Consensus       688 ~~~~~y~~Ap~~Lf~l~~~g~L~PlAIqL~~~p------~~~~piftP~d~--~~~~W~lAK~~v~~~D~~~Hqlv~Hll  759 (1066)
T 3dy5_A          688 EADIRYCAAPLALFYVNKLGHLMPIAIQINQEP------GPENPIWTPHEE--NEHDWMMAKFWLGVAESNFHQLNTHLL  759 (1066)
T ss_dssp             CCCCCBCCCCEEEEEECTTSCEEEEEEESSSSC------SSSSCEECTTCS--SHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             CCCCEECCCCEEEEEECCCCCEEEEEEEEECCC------CCCCCEECCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             655414137579999858998614999974799------998975778999--865699999999755788888888873


Q ss_pred             HHCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCCCCC
Q ss_conf             10003468999871247875751120342101000104999871325895010122553-67999999985055458777
Q 003685          462 DTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPA-KYAMEMSAVSYKNWVFTEQA  540 (803)
Q Consensus       462 ~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~tl~IN~~AR~~LI~~gG~id~~~~~g-~~~~el~~~~y~~w~f~~~~  540 (803)
                      +||+++|||+|||+||||.+|||||||.||||+||+||++||..||++||++|+++++| +|+++|++++|++|+|++++
T Consensus       760 ~THlv~E~f~iAt~R~Ls~~HPi~kLL~PH~r~Tl~IN~~AR~~Li~~gG~id~~~~~g~~~~~~l~~~~y~~~~f~~~~  839 (1066)
T 3dy5_A          760 RTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYH  839 (1066)
T ss_dssp             TTTHHHHHHHHHHHHHCCTTCHHHHHHHHHHTTHHHHHHHTTTTTSSTTSSTTTSSSSTTTHHHHHHHHHHTTCCGGGGC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEECCCC
T ss_conf             02577899999974139976744554406664041136798952328997202442377526999999998337215677


Q ss_pred             CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC---
Q ss_conf             62578636999999999866335777995502129999999999999846306888442579468999999974068---
Q 003685          541 LPADLLKRGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGH---  617 (803)
Q Consensus       541 lP~dL~~RG~~~~d~~~~~g~~l~lp~YpYrdDgL~iW~AI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~---  617 (803)
                      ||+||++|||++++         .||+||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||   
T Consensus       840 lP~dL~~RG~~~~~---------~l~~YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~  910 (1066)
T 3dy5_A          840 LPNALKKRGVDDPS---------KLPGFYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVN  910 (1066)
T ss_dssp             HHHHHHHTTCCCTT---------TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTSCCC
T ss_pred             CCHHHHHCCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf             84246655897733---------368982477699999999999999998638995020578999999999963466656


Q ss_pred             CCCCCCCCCC-CCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHCCCHHHHH
Q ss_conf             9888999998-87987889998756531011001100269853231259984324678999-999245652119168998
Q 003685          618 GDKRDEPWWP-EMQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMPE-PGTPEYAELEKNPDLAFL  695 (803)
Q Consensus       618 ~~~~~~~g~p-~~~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~-kg~~~~~~~~~~~e~~~l  695 (803)
                      ++.++. ||| +|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||+ ||..+        ++++|
T Consensus       911 ~~~~~~-g~P~~l~t~~~Lv~~lT~iI~~aS~qHAAVNfgQ~~~~~~~PN~P~~~r~p~P~~kg~~~--------~~~~l  981 (1066)
T 3dy5_A          911 PGHQDH-GVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEAT--------LQSIL  981 (1066)
T ss_dssp             TTCCCC-CCCSSCCSHHHHHHHHHHHHHHHTHHHHHHHSTTC-------CCCSCBSSCCCSSTTCCC--------HHHHH
T ss_pred             CCCCCC-CCCCCCCCHHHHHHHHHEEHHHCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC--------HHHHH
T ss_conf             777655-566557889999988745120124023310457552011468885443689998988888--------77798


Q ss_pred             HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             40360798998999997731578985345676899998894899999999999999999999871784422347886666
Q 003685          696 KTITAQLQTLLGVSLIEILSRHSTDEVYLGQRDTPEWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVP  775 (803)
Q Consensus       696 ~~LP~~~~a~~~m~~~~lLS~~~~de~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~P  775 (803)
                      ++||++.+++.+|+++|+||+|++|++|||+|+.++|+ |+++++|+++|+++|++||++|++||+++         ++|
T Consensus       982 ~~LP~~~~~~~~~~~~~~LS~~~~de~~Lg~y~~~~~~-d~~~~~a~~~F~~~L~~i~~~I~~RN~~~---------~~p 1051 (1066)
T 3dy5_A          982 STLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWE-DKDALDAINRFQDKLEDISKKIKQRNENL---------EVP 1051 (1066)
T ss_dssp             HHSCCHHHHHHHHHHHHHHTCCCTTCCBTTCCTTSCCC-SHHHHHHHHHHHHHHHHHHHHHHHHTTSC---------SSC
T ss_pred             HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCC
T ss_conf             76899044089999999855788886230357841137-88999999999999999999999971799---------988


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2001568988888898766866753349
Q 003685          776 YTLLYPNTSDYSREGGLTGKGIPNSVSI  803 (803)
Q Consensus       776 Y~yL~P~~~~~~~~~g~t~~gIpnSisI  803 (803)
                      |+||+|+.             |||||||
T Consensus      1052 Y~~L~P~~-------------IpnSIsI 1066 (1066)
T 3dy5_A         1052 YIYLLPER-------------IPNGTAI 1066 (1066)
T ss_dssp             CCTTSTTS-------------CBSSCCC
T ss_pred             CCCCCCCC-------------CCCEEEC
T ss_conf             40079888-------------8763059


No 7  
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A
Probab=1.00  E-value=1  Score=1332.79  Aligned_cols=632  Identities=28%  Similarity=0.504  Sum_probs=565.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCC------CCCEEEEEEEEEECCCCCEEEEEE
Q ss_conf             88634640012222223577887348999997137999985399997069------995377489982259982699970
Q 003685            7 LRGRLGKVAYLEKWITTITPLTAVETLFTITFDWDEAMGVPGAFIIRNHH------HSQFYLKTVTLEDVPGHGRIHFVC   80 (803)
Q Consensus         7 ~~g~~s~~~~l~~~~~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~~------~~ewfl~~i~v~~~p~~~~~~Fpc   80 (803)
                      .+|. |....|++  ++|++  |++++|.++.   .++|++..|+|++..      .+.|||+.|+|+....|..+.|||
T Consensus        34 ~~G~-S~~~~L~~--~~FeR--Gs~d~F~v~~---~dLG~L~~IrI~hDnsg~G~~~~~Wf~~~V~V~~~~tg~~~~Fpc  105 (696)
T 3fg1_A           34 AKGR-TDYLKLDK--GSFEA--GSKEQYTVQG---FDVGDIQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVYSFPC  105 (696)
T ss_dssp             TTEE-CCCEEECS--SCBCT--TCEEEEEEEE---ECCSSEEEEEEEECCCCTTCSCCCEEEEEEEEEETTCSSCEEEEE
T ss_pred             CCCC-EEEEEECC--CCCCC--CCCCEEEEEE---CCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEEH
T ss_conf             8986-64388178--77578--9703799997---148884588999789677777888476279999489995899674


Q ss_pred             CCCCCCCCCCCCCEEEECCCCCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             642028987866335412760065899-9576998999999763599887544572563134467999999998765568
Q 003685           81 NSWVYPTHRYKYDRVFFSNKTYLPCQT-PEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVL  159 (803)
Q Consensus        81 ~sWV~~~~~~~~~r~ff~~~~~Lp~~t-~~~L~~~R~~EL~~~rg~g~g~rk~~driY~y~~yndlG~p~~~~~~~rpvl  159 (803)
                      |+|+...      .++++|+|+||+++ .+.|++||++||+++|.           .|+|+.|.+ |.|.|       +.
T Consensus       106 ~rWL~~d------l~lreG~a~l~~~d~~~~~~~~R~~el~~r~~-----------~y~w~~~~~-G~p~~-------i~  160 (696)
T 3fg1_A          106 FRWVIKD------MVLFPGEATLPFNEVPAIVSEQRQKELEQRKL-----------TYQWDYVSD-DMPGN-------IK  160 (696)
T ss_dssp             EEEESSE------EEECCSSCCCTTSCCCHHHHHHHHHHHHHHHH-----------HSCEECSST-TSCCE-------EC
T ss_pred             HHHCCCC------EEECCCCEECCCCCCCHHHHHHHHHHHHHHHH-----------EECCCCCCC-CCCCE-------EC
T ss_conf             4614687------07547632435556638999999999997464-----------040788889-98640-------04


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             99988987776778999999999998666767887646989865844210145326899887555556421147889989
Q 003685          160 GGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFD  239 (803)
Q Consensus       160 gg~~~~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~~lP~de~f~~~k~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (803)
                      +                      .+         ..+||+|+||++.|..+|..+..++++++.+   +++++. .++|+
T Consensus       161 ~----------------------~~---------~~~Lp~~~~f~~~k~~~~~~~~~~~~~~~~~---~~~~~~-~~~w~  205 (696)
T 3fg1_A          161 A----------------------KT---------HDDLPRDVQFTDEKSRSYQESRKAALVNLGI---GSLFTM-FENWD  205 (696)
T ss_dssp             C----------------------SS---------GGGSCGGGSCCHHHHHHHHHHHHHHHHHHHH---HHHHTT-TCCCC
T ss_pred             C----------------------CC---------CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH---HHHHHH-CCCCC
T ss_conf             4----------------------65---------0018820121321332156667778876544---434321-46878


Q ss_pred             CHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf             98999875028977899710011101360578888651357543346887010200125669499999886089963200
Q 003685          240 SFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIIS  319 (803)
Q Consensus       240 s~~d~~~ly~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~W~~D~~Fg~Q~LaG~NP~~I~  319 (803)
                      +|+||+++|+....                                 ++.   +++.++|++|++||||+|||+||++||
T Consensus       206 ~l~d~~~~f~~~~~---------------------------------~~~---~~v~~~W~~D~~F~~Q~L~G~NP~~I~  249 (696)
T 3fg1_A          206 SYDDYHILYRNWIL---------------------------------GGT---PNMADRWHEDRWFGYQFLNGANPVILT  249 (696)
T ss_dssp             SGGGGGGGGTTSCC---------------------------------SSS---CTTTTTTTSHHHHHHHHHHSSCTTSCE
T ss_pred             CHHHHHHHHCCCCC---------------------------------CCC---HHHHHHCCCHHHHHHHHHCCCCCCEEE
T ss_conf             89999998478888---------------------------------866---667655058599999886489981268


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC-CCCHHHHHHCCCEEEECCCCC--CCH----HHHCC------C---C
Q ss_conf             245699999999745588887664778973038-778999966496558526532--101----21103------6---8
Q 003685          320 RLQEFPPASNLDPKVYGNQHSSITRADIERNMN-ELTIDEAIENKKLFTLDHHDA--LMP----YLRRI------N---S  383 (803)
Q Consensus       320 r~~~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~-g~tl~~al~~grLFi~Dy~~~--~l~----~l~~i------~---~  383 (803)
                      ||+++|+            +|+||++|+++.|+ |+||++|+++||||++||+++  +++    ++++|      |   .
T Consensus       250 r~~~~P~------------~~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~~l~~~~~~~~~~~~~i~~~~~~n~~~~  317 (696)
T 3fg1_A          250 RCDALPS------------NFPVTNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHD  317 (696)
T ss_dssp             ECSSCCT------------TSCCCHHHHGGGCCSSCCHHHHHHHTCEEEEECGGGTTCBCTTSCBCBTTBCC--------
T ss_pred             ECCCCCC------------CCCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHCCCCCCCCCHHHCCCCCCCCCCCC
T ss_conf             7465786------------5678789998650699869999876999999655543446545320000022344564577


Q ss_pred             CC--CCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99--7432240378433899533689983389999999999882430899999991579999999821002568888652
Q 003685          384 TN--TKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWL  461 (803)
Q Consensus       384 ~~--~~~~Ap~~Lff~~~~g~L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WlLAK~~v~~aD~~~Hq~isHll  461 (803)
                      .+  +++|||+||||++++|+|+||||||+|++      ++.+|||||+|+  ++|+|+|||+||++||+++||+++||+
T Consensus       318 ~~~~~y~~Ap~~Lf~l~~~g~L~PiAIqL~~~p------~~~~piftP~d~--~~~~W~lAK~~v~~~D~~~Hql~~Hll  389 (696)
T 3fg1_A          318 EADIRYCAAPLALFYVNKLGHLMPIAIQINQEP------GPENPIWTPHEE--NEHDWMMAKFWLGVAESNFHQLNTHLL  389 (696)
T ss_dssp             CCCCCBCCCCEEEEEECTTSCEEEEEEESSSSC------BTTBCEECTTCS--SHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred             CCCCCCCCCCEEEEEECCCCCEEEEEEEEECCC------CCCCCEECCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             655512116679999868997403899974699------898974788999--854799999999866889988888760


Q ss_pred             HHCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCCCCC
Q ss_conf             10003468999871247875751120342101000104999871325895010122553-67999999985055458777
Q 003685          462 DTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPA-KYAMEMSAVSYKNWVFTEQA  540 (803)
Q Consensus       462 ~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~tl~IN~~AR~~LI~~gG~id~~~~~g-~~~~el~~~~y~~w~f~~~~  540 (803)
                      +||+++|||+|||+||||.+|||||||.||||+||+||++||..||++||++|+++++| +|+++|++++|++|+|++++
T Consensus       390 ~THlv~E~f~iAt~R~L~~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~gG~i~~~~~~g~~~~~~l~~~~~~~~~f~~~~  469 (696)
T 3fg1_A          390 RTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKEVNLQDYH  469 (696)
T ss_dssp             TTHHHHHHHHHHHHHHSCTTSHHHHHHHHHHTTHHHHHHHHHHHTTSTTSHHHHHCTTTTTHHHHHHHHHHTTCCGGGGC
T ss_pred             CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCEECCCC
T ss_conf             31567899999985128876745665036765253015798952028887102450467305999999998346405677


Q ss_pred             CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC---
Q ss_conf             62578636999999999866335777995502129999999999999846306888442579468999999974068---
Q 003685          541 LPADLLKRGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGH---  617 (803)
Q Consensus       541 lP~dL~~RG~~~~d~~~~~g~~l~lp~YpYrdDgL~iW~AI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~---  617 (803)
                      ||+||++|||++++         .||+||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||   
T Consensus       470 lP~dL~~RG~~~~~---------~lp~YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~  540 (696)
T 3fg1_A          470 LPNALKKRGVDDPS---------KLPGFYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVN  540 (696)
T ss_dssp             HHHHHHHTTCCCTT---------TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHHTSCCC
T ss_pred             CCCHHHHCCCCCCC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf             84136655998722---------378981588799999999999999888637997210476999999999972677645


Q ss_pred             CCCCCCCCCCC-CCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHCCCHHHHH
Q ss_conf             98889999988-7987889998756531011001100269853231259984324678999-999245652119168998
Q 003685          618 GDKRDEPWWPE-MQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMPE-PGTPEYAELEKNPDLAFL  695 (803)
Q Consensus       618 ~~~~~~~g~p~-~~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~-kg~~~~~~~~~~~e~~~l  695 (803)
                      ++.++. |||+ |+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||+ ||..+        ++++|
T Consensus       541 ~~~~~~-g~P~~l~T~~~Li~~lT~iIf~aSaqHAAVNfgQ~~~~g~~PN~P~~~r~p~P~~kg~~~--------~~~~l  611 (696)
T 3fg1_A          541 PGHQDH-GVPASFESREQLKEVLTSLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKKKGEAT--------LQSIL  611 (696)
T ss_dssp             TTCCCC-CCCSSCCCHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCBCSCCCSSSSCCC--------HHHHH
T ss_pred             CCCCCC-CCCCCCCCHHHHHHHHHEEHHHCCHHHHHCCCCCCCCEEECCCCCHHHCCCCCCCCCCCC--------HHHHH
T ss_conf             677654-576557889999988754030114023310457553020357884543689999989888--------77898


Q ss_pred             HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             40360798998999997731578985345676899998894899999999999999999999871784422347886666
Q 003685          696 KTITAQLQTLLGVSLIEILSRHSTDEVYLGQRDTPEWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVP  775 (803)
Q Consensus       696 ~~LP~~~~a~~~m~~~~lLS~~~~de~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~P  775 (803)
                      ++||++.+|+.+|+++|+||+|++|++|||+|+.++|+ |+++++|+++|+++|++||++|++||+++         ++|
T Consensus       612 ~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~~~~~-~~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~P  681 (696)
T 3fg1_A          612 STLPSKSQAAKAIATVYILTKFSEDERYLGNYSATAWE-DKDALDAINRFQDKLEDISKKIKQRNENL---------EVP  681 (696)
T ss_dssp             HHSCCHHHHHHHHHHHHHHTCCCTTCCBTTCCTTCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTC---------SSC
T ss_pred             HHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCC
T ss_conf             76898367589999999854788886330357850337-88999999999999999999999982899---------988


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2001568988888898766866753349
Q 003685          776 YTLLYPNTSDYSREGGLTGKGIPNSVSI  803 (803)
Q Consensus       776 Y~yL~P~~~~~~~~~g~t~~gIpnSisI  803 (803)
                      |+||+|+.             |||||||
T Consensus       682 Y~~L~P~~-------------IpnSIsI  696 (696)
T 3fg1_A          682 YIYLLPER-------------IPNGTAI  696 (696)
T ss_dssp             CCTTCGGG-------------SBSSCCC
T ss_pred             CCCCCCCC-------------CCCEEEC
T ss_conf             40179888-------------8762059


No 8  
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}
Probab=1.00  E-value=1  Score=1323.03  Aligned_cols=629  Identities=26%  Similarity=0.455  Sum_probs=561.7

Q ss_pred             CCCCCCCCCCCCCCCC-CCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECC---CCCCEEEEEEEEEECCC----CCEEE
Q ss_conf             8886346400122222-2357788734899999713799998539999706---99953774899822599----82699
Q 003685            6 ELRGRLGKVAYLEKWI-TTITPLTAVETLFTITFDWDEAMGVPGAFIIRNH---HHSQFYLKTVTLEDVPG----HGRIH   77 (803)
Q Consensus         6 ~~~g~~s~~~~l~~~~-~~~~~~~~~~~~y~v~f~~~~~fG~pgai~v~n~---~~~ewfl~~i~v~~~p~----~~~~~   77 (803)
                      |.+|..|....|++.. ++|++  |++++|.++.   .++|++..|+|+..   ..+.|||+.|+|.....    +..+.
T Consensus        46 G~~G~~S~~~~L~~~~~~~FeR--Gs~D~F~v~~---~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~~~~t~~~~g~~~~  120 (698)
T 3vf1_A           46 GKDGAETSAFSLDKYFHNDFES--GGTDTYDQSG---VDVGEIAMITLKENGFGLKSDWYIAKVIIEKIDEATGFSNKYI  120 (698)
T ss_dssp             ETTSCBCCCEEECCBCSSSSCC--CCEEEEEEEE---CCCSSEEEEEEEECCCSSBCCCEEEEEEEEEECTTTCCEEEEE
T ss_pred             ECCCCEECCEEECCCCCCCCCC--CCEEEEEEEE---CCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEE
T ss_conf             7899701366817888775245--8720799982---2567844799998998799975986999973887777895799


Q ss_pred             EEECCCCCCCCCCCCCEEEECCCCCCCCCC-C-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECC---CCCCCCCCCCCC
Q ss_conf             970642028987866335412760065899-9-57699899999976359988754457256313---446799999999
Q 003685           78 FVCNSWVYPTHRYKYDRVFFSNKTYLPCQT-P-EPLRKYRREELVNLRGNGKGELKEWDRVYDYA---FYNDLGNPDKGP  152 (803)
Q Consensus        78 Fpc~sWV~~~~~~~~~r~ff~~~~~Lp~~t-~-~~L~~~R~~EL~~~rg~g~g~rk~~driY~y~---~yndlG~p~~~~  152 (803)
                      ||||+|+...      .++++|+|+||+++ . +.|++||++||+++|.           .|+|+   +|.+ |.|.|. 
T Consensus       121 Fpc~rWL~~d------~~l~~G~a~l~~~d~~~~~~~~~R~~El~~r~~-----------~y~w~~~~~~~~-G~p~~~-  181 (698)
T 3vf1_A          121 FPCYRWVIKQ------LVVYEGKAILPNSKDNVKTIAEQRTKEVSENKK-----------LYKWGTDPRYVQ-DLPGFV-  181 (698)
T ss_dssp             EEEEEECSSE------EEEECSSCCCTTSSSCCHHHHHHHHHHHHHHHH-----------HSCBCCCGGGSS-SSCCCB-
T ss_pred             EEHHHCCCCC------CEECCCCEECCCCCCCCHHHHHHHHHHHHHHHH-----------HCCCCCCCCCCC-CCCCEE-
T ss_conf             7720304688------186677403351355666899999999998776-----------203799886589-987620-


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHHHHHHC
Q ss_conf             876556899988987776778999999999998666767887646989865844210145326899-8875555564211
Q 003685          153 EYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKS-LVQILLPEITSLC  231 (803)
Q Consensus       153 ~~~rpvlgg~~~~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~~lP~de~f~~~k~~~f~~~~~~~-~~~~~~~~~~~~~  231 (803)
                                                  +..+         ..+||+|+||++.|..+| .+..++ ++++.+   ++++
T Consensus       182 ----------------------------~~~~---------~~~Lp~~~~f~~~k~~~~-~~~~~~~~~~~~~---~~~~  220 (698)
T 3vf1_A          182 ----------------------------DAEE---------PKSLPKDVQFTDEATSSL-FRVGLADFANLGL---SHLF  220 (698)
T ss_dssp             ----------------------------CCSS---------GGGSCGGGSCSSGGGGGS-SCCSHHHHHHTTC---GGGT
T ss_pred             ----------------------------CCCC---------CCCCCHHHCCCCCCCCHH-HHHHHHHHHHHHH---HHHH
T ss_conf             ----------------------------5677---------001883232012233326-5543578776442---1033


Q ss_pred             CCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHC
Q ss_conf             47889989989998750289778997100111013605788886513575433468870102001256694999998860
Q 003685          232 DKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLA  311 (803)
Q Consensus       232 ~~~~~~~~s~~d~~~ly~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~W~~D~~Fg~Q~La  311 (803)
                      +. .++|++|+||+++|+...+                                 ++.   +++.++|++|++||||+||
T Consensus       221 ~~-~~~w~~l~d~~~~f~~~~~---------------------------------~~~---~~v~~~W~~D~~F~~Q~L~  263 (698)
T 3vf1_A          221 GI-WDDWDCLEDFRQLITPAIK---------------------------------SGL---PHAAEYWRDDVWFGSQFLN  263 (698)
T ss_dssp             TC-CCCCSSGGGGGGGCCTTST---------------------------------TCS---CTHHHHTTCHHHHHHHHHH
T ss_pred             HH-CCCCCCHHHHHHHHCCCCC---------------------------------CCC---HHHHHHCCCHHHHHHHHHC
T ss_conf             20-5686789999998457888---------------------------------765---4455525587999999864


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC-CCCHHHHHHCCCEEEECCCCCCCHHH--HCCCCCCCCC
Q ss_conf             89963200245699999999745588887664778973038-77899996649655852653210121--1036899743
Q 003685          312 GVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMN-ELTIDEAIENKKLFTLDHHDALMPYL--RRINSTNTKT  388 (803)
Q Consensus       312 G~NP~~I~r~~~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~-g~tl~~al~~grLFi~Dy~~~~l~~l--~~i~~~~~~~  388 (803)
                      |+||++||||+++|+            +|+||++|++..|+ |+||++|+++||||++||++  |+++  +.++...++.
T Consensus       264 G~NP~~I~r~~~~P~------------~~~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~~--l~~~~~~~~~~~~~y~  329 (698)
T 3vf1_A          264 GSNPEVIRRCDKLPE------------NFPVKNEMVEKLLDRGYTLEKAMKEGLIFITDYKI--LEGIPTMDTPEDKRYI  329 (698)
T ss_dssp             SSCCSSCEECSSCCT------------TCCCCHHHHGGGSCTTCCHHHHHHTTCEEEEECGG--GTTCCCCEETTEECBC
T ss_pred             CCCCCEEEECCCCCC------------CCCCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHH--HCCCCCCCCCCCCCEE
T ss_conf             899842788566886------------55676899986506898799998759989996345--3477565448873251


Q ss_pred             CCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf             22403784338995336899833899999999998824308-99999991579999999821002568888652100034
Q 003685          389 YASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTP-AENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVI  467 (803)
Q Consensus       389 ~Ap~~Lff~~~~g~L~PIAIqL~~~~~~~~~~~~~~~VftP-~d~~~~~~~WlLAK~~v~~aD~~~Hq~isHll~THlv~  467 (803)
                      |||+||||++++|+|+||||||+|++      ++.+||||| +|   ++|+|+|||+||++||+++||+++||++||+++
T Consensus       330 ~Ap~~Lf~l~~~g~L~PiAIqL~~~p------~~~~~iftP~~d---~~~~W~lAK~~v~~~D~~~Hql~~Hll~TH~v~  400 (698)
T 3vf1_A          330 TTPLGLFYLKNNDDIIPIAIQLYQQP------GENNSIWTPLKD---TEWDWIMAKLWLRCADTQYHQMITHLLRCHLMM  400 (698)
T ss_dssp             CCCEEEEEECTTSCEEEEEEESSSSC------BTTBCEECTTTS---CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHH
T ss_pred             CCCEEEEEECCCCCEEEEEEEEECCC------CCCCCEECCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             16458999878997403899974699------888973647989---856799999999756888888888874136778


Q ss_pred             HHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCCCCCCCHHHH
Q ss_conf             68999871247875751120342101000104999871325895010122553-67999999985055458777625786
Q 003685          468 EPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPA-KYAMEMSAVSYKNWVFTEQALPADLL  546 (803)
Q Consensus       468 Epf~iAt~RqLs~~HPI~kLL~PH~r~tl~IN~~AR~~LI~~gG~id~~~~~g-~~~~el~~~~y~~w~f~~~~lP~dL~  546 (803)
                      |||+|||+||||.+|||||||.||||+||+||++||..||++||++|+++++| +|+++|++++|++|+|++++||+||+
T Consensus       401 E~~~iAt~R~L~~~HPi~kLL~PH~r~tl~IN~~ar~~Li~~~G~i~~~~~~g~~~~~~l~~~~~~~~~f~~~~lP~dL~  480 (698)
T 3vf1_A          401 EPTAVSSWRNLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSVTFDSYDLVKDLR  480 (698)
T ss_dssp             HHHHHHHHHHCCTTSHHHHHHHHHHTTHHHHHHHHHHHTSSTTSHHHHHCTTTTTHHHHHHHHHHTTCCGGGGCHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf             99999984249976745664115664032014898962108887014540367205999999998435425677868898


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC---CCCCCC
Q ss_conf             36999999999866335777995502129999999999999846306888442579468999999974068---988899
Q 003685          547 KRGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGH---GDKRDE  623 (803)
Q Consensus       547 ~RG~~~~d~~~~~g~~l~lp~YpYrdDgL~iW~AI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~---~~~~~~  623 (803)
                      +|||++            ||+||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||   ++.++.
T Consensus       481 ~RG~~~------------l~~YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~  548 (698)
T 3vf1_A          481 QRGVDG------------LRKFYYKDDALLLWNVIHQFVQDIIQIYYNDDDSVKKDNEIQDWIRDLHENGYPAGSDGTDK  548 (698)
T ss_dssp             HTTCTT------------CTTCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHTCHHHHHHHHHHHHTTSCCCTTCCCC
T ss_pred             HCCCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             769976------------78983077699999999999999887538993010365999999999974467655677654


Q ss_pred             CCCCC-CCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHCCCHHHHHHHCCCH
Q ss_conf             99988-7987889998756531011001100269853231259984324678999-999245652119168998403607
Q 003685          624 PWWPE-MQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMPE-PGTPEYAELEKNPDLAFLKTITAQ  701 (803)
Q Consensus       624 ~g~p~-~~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~-kg~~~~~~~~~~~e~~~l~~LP~~  701 (803)
                       |||+ |+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||+ ||..+        ++++|++||++
T Consensus       549 -g~P~~l~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~g~~PN~P~~~r~p~P~~kg~~~--------~~~~l~~LP~~  619 (698)
T 3vf1_A          549 -KVPKSFENREELVHFLTVVVFTCSCQHAAVNFSQMATYGFHPNSPTLMRQPPPTEKGKSN--------HKVIMASLANK  619 (698)
T ss_dssp             -CCCSSCCSHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHSSGGGSCSCBSSCCCSSTTCCC--------HHHHHHHSCCH
T ss_pred             -CCCCCCCCHHHHHHHHHEEHHHCCCHHHHCCCCCCCCEEECCCCCHHHCCCCCCCCCCCC--------HHHHHHHCCCH
T ss_conf             -576557889999988754030114023310457553020357884543689999989888--------77897768788


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98998999997731578985345676899998894899999999999999999999871784422347886666200156
Q 003685          702 LQTLLGVSLIEILSRHSTDEVYLGQRDTPEWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYP  781 (803)
Q Consensus       702 ~~a~~~m~~~~lLS~~~~de~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P  781 (803)
                      .+++.+|+++|+||+|++|++|||+|+.++|+ |+++++|+++|+++|++||++|++||+++         ++||+||+|
T Consensus       620 ~~a~~~~~~~~~LS~~~~de~~LG~y~~~~~~-~~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P  689 (698)
T 3vf1_A          620 HQAVTMVSVVNALTTIYPTEKFLGDYADNLFG-DAAAHAAMAKFKSNLANITKQITERNQGM---------VSPYTWLIP  689 (698)
T ss_dssp             HHHHHHHHHHHHHTCCCTTCCBTTCCTTCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHTTTC---------SSCCCTTCG
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCC
T ss_conf             99999999999854788887430357840237-88999999999999999999999972899---------988402798


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             8988888898766866753349
Q 003685          782 NTSDYSREGGLTGKGIPNSVSI  803 (803)
Q Consensus       782 ~~~~~~~~~g~t~~gIpnSisI  803 (803)
                      +.             |||||||
T Consensus       690 ~~-------------IpnSIsI  698 (698)
T 3vf1_A          690 GH-------------VPNSIAI  698 (698)
T ss_dssp             GG-------------SBSSCCC
T ss_pred             CC-------------CCCEEEC
T ss_conf             88-------------9773059


No 9  
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa}
Probab=1.00  E-value=1  Score=1247.94  Aligned_cols=553  Identities=27%  Similarity=0.431  Sum_probs=503.0

Q ss_pred             CCEEEECCCCCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             6335412760065899-957699899999976359988754457256313446799999999876556899988987776
Q 003685           92 YDRVFFSNKTYLPCQT-PEPLRKYRREELVNLRGNGKGELKEWDRVYDYAFYNDLGNPDKGPEYARPVLGGSQEYPYPRR  170 (803)
Q Consensus        92 ~~r~ff~~~~~Lp~~t-~~~L~~~R~~EL~~~rg~g~g~rk~~driY~y~~yndlG~p~~~~~~~rpvlgg~~~~pyprr  170 (803)
                      ...++++|+|+||.++ .+.|++||++||+++|.           .|+|++|.+ |.|.|       +.+          
T Consensus        15 ~~~~l~~g~a~~~~~d~~~~~~~~R~~El~~r~~-----------~y~w~~~~~-G~p~~-------i~~----------   65 (573)
T 3rde_A           15 VPRGSHMGTARTVVDDPQGLFKKHREEELAERRK-----------LYRWGNWKD-GLILN-------IAS----------   65 (573)
T ss_dssp             -------CCCCCSTTCTTCTTHHHHHHHHHHHHH-----------HSCEECSST-TSCCE-------ECC----------
T ss_pred             EEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHH-----------EECCCCCCC-CCCCC-------CCC----------
T ss_conf             4999668625740667778999999999998551-----------242899899-99740-------067----------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCC
Q ss_conf             77899999999999866676788764698986584421014532689988755555642114788998998999875028
Q 003685          171 GRTGRKPTKTDPNSERRLPLISLDIYVPRDERFGHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEG  250 (803)
Q Consensus       171 ~rtgr~~~~~d~~~e~~~~~~~~~~~lP~de~f~~~k~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ly~~  250 (803)
                                  .+         ..+||+|+||++.|..+|..+..++++++.+   +++++. .++|++|+||+++|+.
T Consensus        66 ------------~~---------~~~LP~d~~f~~~K~~~f~~~~~~~~~~~~l---~~~~~~-~~~w~sl~D~~~lf~~  120 (573)
T 3rde_A           66 ------------TG---------IHDLPVDERFLEDKRIDFEASLAKGLADLAV---KDSLNV-LMSWNSLDSFNRIFWS  120 (573)
T ss_dssp             ------------SS---------GGGSCGGGSCCHHHHHHHHHHHHHHHHHHHH---HHHHHT-TSCCCSGGGGGGGCCS
T ss_pred             ------------CC---------CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH---HHHHHH-CCCCCCHHHHHHHHCC
T ss_conf             ------------87---------0008831201542332177777888887423---456651-4798989999998457


Q ss_pred             CCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             97789971001110136057888865135754334688701020012566949999988608996320024569999999
Q 003685          251 GIKLPNSQTVSKIRDRIPWEMLKELVRNDGERFLKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNL  330 (803)
Q Consensus       251 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~W~~D~~Fg~Q~LaG~NP~~I~r~~~~P~~~~l  330 (803)
                      +..                                    .+.+++.++|++|++||||+|||+||++|+||+++|+    
T Consensus       121 ~~~------------------------------------~~~e~v~~~W~~D~~Fg~Q~L~G~NP~~I~r~~~~P~----  160 (573)
T 3rde_A          121 GQS------------------------------------KLAERVRDSWKEDALFGYQFLNGTNPMLLRHSVELPA----  160 (573)
T ss_dssp             CCC------------------------------------HHHHHHHHHTTCHHHHHHHHHHSSCTTSCEECSSCCT----
T ss_pred             CCC------------------------------------CCCCCHHHHCCCHHHHHHHHHCCCCCHHEEECCCCCC----
T ss_conf             998------------------------------------8650123323274999999864899722366676874----


Q ss_pred             CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCHHHHCCCCCC---CCCCCCCEEEEECCCCCEEEEE
Q ss_conf             9745588887664778973038778999966496558526532101211036899---7432240378433899533689
Q 003685          331 DPKVYGNQHSSITRADIERNMNELTIDEAIENKKLFTLDHHDALMPYLRRINSTN---TKTYASRTLLLLQNDGTLKPLA  407 (803)
Q Consensus       331 ~~~~~g~~~~~vt~~~i~~~l~g~tl~~al~~grLFi~Dy~~~~l~~l~~i~~~~---~~~~Ap~~Lff~~~~g~L~PIA  407 (803)
                              +|+||++|++.   |+||++|+++||||++||+  +|+++ .+|..+   ++.|||+||||++++|+|+|||
T Consensus       161 --------~~~vt~~~v~~---g~tl~~al~~grLfi~Dy~--~l~~i-~~n~~~~~~~y~~Ap~~Lf~l~~~g~L~PlA  226 (573)
T 3rde_A          161 --------RLKFPPGMEEL---QAQLEKELQGGTLFEADFS--LLDGI-KANVILSSQQYLAVPLVMLKLQPDGKLLPMV  226 (573)
T ss_dssp             --------TCCCCTTCHHH---HHHHHHHHHHTCEEEEECG--GGTTC-CCCEETTEECCCCCCEEEEEECTTSCEEEEE
T ss_pred             --------CCCCCHHHHHC---CCCHHHHHHCCCEEEEEHH--HHCCC-CCCCCCCCCCEEECCEEEEEECCCCCEEEEE
T ss_conf             --------45685999861---6609999972998998425--53446-5565688731521556899987899762589


Q ss_pred             EEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHC
Q ss_conf             98338999999999988243089999999157999999982100256888865210003468999871247875751120
Q 003685          408 IELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQLAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKL  487 (803)
Q Consensus       408 IqL~~~~~~~~~~~~~~~VftP~d~~~~~~~WlLAK~~v~~aD~~~Hq~isHll~THlv~Epf~iAt~RqLs~~HPI~kL  487 (803)
                      |||+.|.+    +++.++||||+|   ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+||||||
T Consensus       227 IqL~~p~~----~~~~~~iftP~d---~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~E~f~iAt~R~Ls~~HPI~kL  299 (573)
T 3rde_A          227 IQLQLPRE----GSPLPPLFLPTD---PPMVWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKL  299 (573)
T ss_dssp             EECSCCCT----TSCCCCEECTTS---CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCTTSHHHHH
T ss_pred             EEEECCCC----CCCCCCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
T ss_conf             99745899----888898477899---95179999999861189999999987325788899999984239986752553


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCH-HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             342101000104999871325895010122553-6799999998505545877762578636999999999866335777
Q 003685          488 LHPHFRDTMNINALARQILINAGGVLENTVFPA-KYAMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHGIKLLIE  566 (803)
Q Consensus       488 L~PH~r~tl~IN~~AR~~LI~~gG~id~~~~~g-~~~~el~~~~y~~w~f~~~~lP~dL~~RG~~~~d~~~~~g~~l~lp  566 (803)
                      |.||||+||+||++||..||++||++|+++++| +|+++|++++|++|+|++++||+||++|||++            ||
T Consensus       300 L~PH~r~Tl~IN~~AR~~Li~~gGiid~~~~~g~~~~~~l~~~~~~~~~f~~~~lP~dL~~RG~~~------------lp  367 (573)
T 3rde_A          300 LIPHFRYTMEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAALLTYSSFCPPDDLADRGLLG------------VE  367 (573)
T ss_dssp             HGGGGTTHHHHHHHCCCCCSSTTSHHHHHCTTTTTHHHHHHHHHHHHCCSGGGSHHHHHHHTTCTT------------CT
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCC------------CC
T ss_conf             205665054423999973428987124553267023999999987025115246708788669876------------88


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHH
Q ss_conf             9955021299999999999998463068884425794689999999740689888999998-879878899987565310
Q 003685          567 DYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLIQGDNELQSWWEELRNVGHGDKRDEPWWP-EMQTQAELVQTCTIIIWV  645 (803)
Q Consensus       567 ~YpYrdDgL~iW~AI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~g~p-~~~t~~~Lv~~lT~iIf~  645 (803)
                      +||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||++.++. ||| +|+|+++||++||+|||+
T Consensus       368 ~YpY~dDgL~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~-g~P~~l~T~~~Li~~lT~iIf~  446 (573)
T 3rde_A          368 SSFYAQDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDR-GFPVSLQSKEQLCHFVTMCIFT  446 (573)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHTCHHHHHHHHCCCCCCTTSCGGG-TCCSCCCSHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHH
T ss_conf             982577699999999999999999857990341387889999999973446777555-6776678899999888521522


Q ss_pred             CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             11001100269853231259984324678999999245652119168998403607989989999977315789853456
Q 003685          646 ASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEVYLG  725 (803)
Q Consensus       646 aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~de~~LG  725 (803)
                      ||+||||||||||+|+||+||+|++||+|||+...        .+++++|++||++.+++.+|+++|+||+|++|++|||
T Consensus       447 aSaqHAAVNfgQ~~y~g~vPN~P~~~r~p~P~~k~--------~~~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG  518 (573)
T 3rde_A          447 CTGQHSSNHLGQLDWYTWVPNAPCTMRLPPPTTKD--------ATLETVMATLPNFHQASLQMSITWQLGRCQPTMVALG  518 (573)
T ss_dssp             CCCCHHHHHTTHHHHSSSGGGSCSCCSSCCCSSSC--------CCHHHHHHHSCCHHHHHHHHHHHHHHHSCCTTCCBTT
T ss_pred             CCHHHHHHCCCCCCEEEECCCCHHHHCCCCCCCCC--------CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             13034431347553040567872764699999999--------8799999878886889999999999547888875203


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             768999988948999999999999999999998717844223478866662001568988888898766866753349
Q 003685          726 QRDTPEWTLDNEPLAAFERFGNRLLEIENRILEMNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNSVSI  803 (803)
Q Consensus       726 ~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~g~~~~PY~yL~P~~~~~~~~~g~t~~gIpnSisI  803 (803)
                      +|+. .|+.|+++++|+++|+++|++||++|++||+++         ++||+||+|+.             |||||||
T Consensus       519 ~y~~-~~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~~-------------IpnSIsI  573 (573)
T 3rde_A          519 QHEE-EYFSGPGPKAVLTKFREELAALDKDIEVRNAKL---------ALPYEYLRPSR-------------VENSVAI  573 (573)
T ss_dssp             CCCC-CCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSCCCTTCTTT-------------SBSSCCC
T ss_pred             CCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCCC-------------CCCCCCC
T ss_conf             5873-202788999999999999999999999981899---------98850079889-------------8770249


No 10 
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens}
Probab=1.00  E-value=1  Score=1117.80  Aligned_cols=492  Identities=27%  Similarity=0.456  Sum_probs=443.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCC
Q ss_conf             84421014532689988755555642114788998998999875028977899710011101360578888651357543
Q 003685          204 GHLKFSDFLAYALKSLVQILLPEITSLCDKTINEFDSFDDVLNLYEGGIKLPNSQTVSKIRDRIPWEMLKELVRNDGERF  283 (803)
Q Consensus       204 ~~~k~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ly~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  283 (803)
                      ++.|..+|..+..++++.+.+   +++++. .++|++|+||+++|....+        ..                    
T Consensus        13 ~~~k~~~~~~~~~~~~~~~~~---~~~~~~-~~~w~~l~D~~~~f~~~~~--------~~--------------------   60 (541)
T 3d3l_A           13 LGTENLDFEWTLKAGALEMAL---KRVYTL-LSSWNCLEDFDQIFWGQKS--------AL--------------------   60 (541)
T ss_dssp             ---------CCSSTTHHHHHH---HHHHHH-HHTTSSSTTHHHHHTSCCC--------HH--------------------
T ss_pred             CCCCCCEEEECHHHHHHHHHH---HHHHHC-CCCCCCHHHHHHHHCCCCC--------CC--------------------
T ss_conf             555640234004677788789---988641-5886669999998436777--------77--------------------


Q ss_pred             CCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCC
Q ss_conf             34688701020012566949999988608996320024569999999974558888766477897303877899996649
Q 003685          284 LKFPMPDVIKEDRSAWRTDEEFAREMLAGVNPVIISRLQEFPPASNLDPKVYGNQHSSITRADIERNMNELTIDEAIENK  363 (803)
Q Consensus       284 ~~~p~p~~~~~~~~~W~~D~~Fg~Q~LaG~NP~~I~r~~~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~g~tl~~al~~g  363 (803)
                              .+++.++|++|++||||+|||+||++|+||+++|+            +|+||++|++   +++||++|+++|
T Consensus        61 --------~~~v~~~W~~De~Fa~Q~L~G~NP~~I~r~~~~P~------------~~~vt~~~v~---~~~tl~~al~~g  117 (541)
T 3d3l_A           61 --------AEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPS------------RLVLPSGMEE---LRAQLEKELQNG  117 (541)
T ss_dssp             --------HHHHHHHTTSHHHHHHHHHHSSCCSSCEECSSCCT------------TCCCCSSCHH---HHHHHHHHHHTT
T ss_pred             --------CHHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCCC------------CCCCCHHHHC---CCCCHHHHHHCC
T ss_conf             --------43455431171999999864899741234677862------------2579988966---866699997649


Q ss_pred             CEEEECCCCCCCHHHHCCCC---CCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHH
Q ss_conf             65585265321012110368---997432240378433899533689983389999999999882430899999991579
Q 003685          364 KLFTLDHHDALMPYLRRINS---TNTKTYASRTLLLLQNDGTLKPLAIELSLPHPQGDHHGAVSKVFTPAENGVEGSVWQ  440 (803)
Q Consensus       364 rLFi~Dy~~~~l~~l~~i~~---~~~~~~Ap~~Lff~~~~g~L~PIAIqL~~~~~~~~~~~~~~~VftP~d~~~~~~~Wl  440 (803)
                      |||++||++  |+++ .+|.   .+.+.|||+||||++++|+|+||||||+.|.+  +  .+.++||||+|   ++|+|+
T Consensus       118 rLfi~Dy~~--l~~~-~~n~~~~~~~Y~~Ap~~lf~l~~~g~L~PlAIqL~~p~~--~--~p~~~VftP~D---~~~~W~  187 (541)
T 3d3l_A          118 SLFEADFIL--LDGI-PANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQPPNP--S--SPTPTLFLPSD---PPLAWL  187 (541)
T ss_dssp             CEEEEECGG--GTTC-CC-----CCCCCCCCEEEEEECTTSCEEEEEEESSCCBT--T--BSSCCCBCTTS---CHHHHH
T ss_pred             CEEEECCHH--HCCC-CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCC--C--CCCCEEECCCC---CCHHHH
T ss_conf             978835255--4668-666558775412255699999899988679999607999--8--98750784899---940899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf             99999982100256888865210003468999871247875751120342101000104999871325895010122553
Q 003685          441 LAKAYAAVNDSGYHQLVSHWLDTHAVIEPFVIATNRQLSVLHPIYKLLHPHFRDTMNINALARQILINAGGVLENTVFPA  520 (803)
Q Consensus       441 LAK~~v~~aD~~~Hq~isHll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~tl~IN~~AR~~LI~~gG~id~~~~~g  520 (803)
                      |||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.||++||++|+++++|
T Consensus       188 lAK~~v~~aD~~~HqlisHll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~~Giid~~~~~g  267 (541)
T 3d3l_A          188 LAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTG  267 (541)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTSHHHHHHGGGCCC--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCC
T ss_conf             99999998888999999877566788889999864248865840455478998799888999975218887122320588


Q ss_pred             HH-HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             67-99999998505545877762578636999999999866335777995502129999999999999846306888442
Q 003685          521 KY-AMEMSAVSYKNWVFTEQALPADLLKRGVAEPDTSQPHGIKLLIEDYPYAVDGLEIWAAIETWVKEYCSFYYPRDHLI  599 (803)
Q Consensus       521 ~~-~~el~~~~y~~w~f~~~~lP~dL~~RG~~~~d~~~~~g~~l~lp~YpYrdDgL~iW~AI~~~V~~~v~~yY~~D~~V  599 (803)
                      .+ +++|++++|++|+|++++||+||++|||.            .||+||||+|||+||+||++||++||++||++|++|
T Consensus       268 ~~~~~el~~~~y~~~~f~~~~lP~dL~~RG~e------------~ip~YpY~dDgL~iW~aI~~~V~~yv~~yY~~D~~V  335 (541)
T 3d3l_A          268 GGGHVQLLRRAAAQLTYCSLCPPDDLADRGLL------------GLPGALYAHDALRLWEIIARYVEGIVHLFYQRDDIV  335 (541)
T ss_dssp             -CCSHHHHHHHHHTCCTTTTCHHHHHHHTTCS------------SCTTCHHHHHHHHHHHHHHHHHHHHHHHHSCSHHHH
T ss_pred             CCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCC------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             42289999999727621424575666645755------------466885200089999999999999998736884322


Q ss_pred             CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf             57946899999997406898889999988798788999875653101100110026985323125998432467899-99
Q 003685          600 QGDNELQSWWEELRNVGHGDKRDEPWWPEMQTQAELVQTCTIIIWVASALHAAVNFGQYPYAGYLPNRPTVSRRFMP-EP  678 (803)
Q Consensus       600 ~~D~ELQaW~~Ei~~~G~~~~~~~~g~p~~~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P-~k  678 (803)
                      ++|.|||+||+||+++||++.++.++|++|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+||| ++
T Consensus       336 ~~D~ELQaW~~Ei~~~G~~~~~~~g~p~~l~T~~~Li~~lT~iIf~aSaqHAAVNfgQy~y~g~vPN~P~~~r~p~P~~k  415 (541)
T 3d3l_A          336 KGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTTK  415 (541)
T ss_dssp             HHCHHHHHHHHHHHTTTTTSGGGTTCCSSCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCCSSCCCSSS
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf             36789999999998456778756799976675999999977567640024453325866310226677566569999777


Q ss_pred             CCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99245652119168998403607989989999977315789853456768999988948999999999999999999998
Q 003685          679 GTPEYAELEKNPDLAFLKTITAQLQTLLGVSLIEILSRHSTDEVYLGQRDTPEWTLDNEPLAAFERFGNRLLEIENRILE  758 (803)
Q Consensus       679 g~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~lLS~~~~de~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~  758 (803)
                      |..+        ++++|++||++.+++.+|+++++||+|++||+|||+|+. .|+.|+++++|+++|+++|++||++|++
T Consensus       416 g~~~--------~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~-~~f~d~~~~~a~~~F~~~L~~ie~~I~~  486 (541)
T 3d3l_A          416 EDVT--------MATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEITA  486 (541)
T ss_dssp             SSCC--------HHHHHHHSCCHHHHHHHHHHHHHHC----CCCBTTCCCC-CSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC--------HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8837--------999998787889999999999996368888761256774-1126848999999999999999999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             717844223478866662001568988888898766866753349
Q 003685          759 MNNDKRWKNRVGAVKVPYTLLYPNTSDYSREGGLTGKGIPNSVSI  803 (803)
Q Consensus       759 RN~~~~~~~r~g~~~~PY~yL~P~~~~~~~~~g~t~~gIpnSisI  803 (803)
                      ||+++         ++||+||+|+.             |||||||
T Consensus       487 RN~~~---------~~PY~~L~P~~-------------IpnSIsI  509 (541)
T 3d3l_A          487 RNEQL---------DWPYEYLKPSC-------------IENSVTS  509 (541)
T ss_dssp             HHHTC---------SSCCCSCCGGG-------------SBSSCC-
T ss_pred             HCCCC---------CCCCCEECCCC-------------CCCEEEE
T ss_conf             70899---------99971179889-------------7757878


Done!