BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003687
(803 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84LK0|MSH1_ARATH DNA mismatch repair protein MSH1, mitochondrial OS=Arabidopsis
thaliana GN=MSH1 PE=1 SV=1
Length = 1118
Score = 1259 bits (3259), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/862 (71%), Positives = 697/862 (80%), Gaps = 68/862 (7%)
Query: 1 MPVIGVSRSAKGYCIISILETMKTYSLEDGLTEDALVTKLRTSRYHHLFLHTSLRQNTSG 60
MPV+G+SRSA+GYC+ISI ETMK YSL+DGLTE+ALVTKLRT R HHLFLH SLR N SG
Sbjct: 246 MPVVGISRSARGYCMISIFETMKAYSLDDGLTEEALVTKLRTRRCHHLFLHASLRHNASG 305
Query: 61 TSRWGEYGEGGLLWGECIARHFEWFEGDPVIELLLKVKELYGLENEVTFRNVTVSYENRP 120
T RWGE+GEGGLLWGEC +R+FEWFEGD + ELL +VK++YGL++EV+FRNV V +NRP
Sbjct: 306 TCRWGEFGEGGLLWGECSSRNFEWFEGDTLSELLSRVKDVYGLDDEVSFRNVNVPSKNRP 365
Query: 121 RPLHLGTATQIGAIPTEGIPCLLKVLLPSNCSGLPILYVRDLLLNPPAYEIASTIQAICK 180
RPLHLGTATQIGA+PTEGIPCLLKVLLPS CSGLP LYVRDLLLNPPAY+IA IQ CK
Sbjct: 366 RPLHLGTATQIGALPTEGIPCLLKVLLPSTCSGLPSLYVRDLLLNPPAYDIALKIQETCK 425
Query: 181 LMSKVTCSIPEFTC-----LVKLLELREANHIEFCRIKNVLDEILHMYGNSELNEILELL 235
LMS VTCSIPEFTC LVKLLE REAN+IEFCRIKNVLD++LHM+ ++EL EIL+LL
Sbjct: 426 LMSTVTCSIPEFTCVSSAKLVKLLEQREANYIEFCRIKNVLDDVLHMHRHAELVEILKLL 485
Query: 236 MDPTWVATGLKIDFETLVEECRLASVRIGEMISLD-GESDQKICSYDNIPSEFFEDMEST 294
MDPTWVATGLKIDF+T V EC AS IGEMISLD ES Q + DN+P+EFF DMES+
Sbjct: 486 MDPTWVATGLKIDFDTFVNECHWASDTIGEMISLDENESHQNVSKCDNVPNEFFYDMESS 545
Query: 295 WKGRVKRIHIEPEIAEVEMAAEALSLAVTEDFLPIISRIKATTAPLGGPKGEILYAREHE 354
W+GRVK IHIE EI +VE +AEALSLAV EDF PIISRIKATTA LGGPKGEI YAREHE
Sbjct: 546 WRGRVKGIHIEEEITQVEKSAEALSLAVAEDFHPIISRIKATTASLGGPKGEIAYAREHE 605
Query: 355 AVWFKGKKFRPTVWASTPGEEQIKQLKPAVDSKGRKVGEEWFSTLKVEEALERYHEAGAK 414
+VWFKGK+F P++WA T GE+QIKQLKPA+DSKG+KVGEEWF+T KVE AL RYHEA
Sbjct: 606 SVWFKGKRFTPSIWAGTAGEDQIKQLKPALDSKGKKVGEEWFTTPKVEIALVRYHEASEN 665
Query: 415 AKAKVLELLRGLSSELQTKINILVFASMLLVIGKALFAHVSEGRRRKWVFPALKDIELD- 473
AKA+VLELLR LS +LQTKIN+LVFASMLLVI KALF+H EGRRRKWVFP L LD
Sbjct: 666 AKARVLELLRELSVKLQTKINVLVFASMLLVISKALFSHACEGRRRKWVFPTLVGFSLDE 725
Query: 474 ------GANCLKMNGLSPYWFDAAEGSAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAAS 527
GA+ +K+ GLSPYWFD + G+AVHNTVDMQSLFLLTGPNGGGKSSLLRSICAA+
Sbjct: 726 GAKPLDGASRMKLTGLSPYWFDVSSGTAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAAA 785
Query: 528 LLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVL 587
LLGI GLMVPAESA IP+FD+IMLHMKSYDSP DGKSSFQVEMSEIRSIV+ TSRSLVL
Sbjct: 786 LLGISGLMVPAESACIPHFDSIMLHMKSYDSPVDGKSSFQVEMSEIRSIVSQATSRSLVL 845
Query: 588 IDEICRGTETAKGTCIAGSIIETLDNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYL 647
IDEICRGTETAKGTCIAGS++E+LD GCLGIVSTHLHGIFSLPL KN YKAMG E +
Sbjct: 846 IDEICRGTETAKGTCIAGSVVESLDTSGCLGIVSTHLHGIFSLPLTAKNITYKAMGAENV 905
Query: 648 DGQTVPTWKLVDGICRESLAFETAKREGVPETIIQRAEDLYIA----------------- 690
+GQT PTWKL DG+CRESLAFETAKREGVPE++IQRAE LY++
Sbjct: 906 EGQTKPTWKLTDGVCRESLAFETAKREGVPESVIQRAEALYLSVYAKDASAEVVKPDQII 965
Query: 691 ------------------------------CG--------VNCVMIAAREQPPPSIIGAS 712
CG + C+ I ARE PPPS +G+S
Sbjct: 966 TSSNNDQQIQKPVSSERSLEKDLAKAIVKICGKKMIEPEAIECLSIGARELPPPSTVGSS 1025
Query: 713 CVYVMLRPDKKLYIGQTDDLDGRIRAHRGKEGMQSASFLYFVVPGKSIACQIETLLINQL 772
CVYVM RPDK+LYIGQTDDL+GRIRAHR KEG+Q +SFLY +V GKS+ACQ+ETLLINQL
Sbjct: 1026 CVYVMRRPDKRLYIGQTDDLEGRIRAHRAKEGLQGSSFLYLMVQGKSMACQLETLLINQL 1085
Query: 773 YSQGFLLANIADGKHRNFGTSS 794
+ QG+ LAN+ADGKHRNFGTSS
Sbjct: 1086 HEQGYSLANLADGKHRNFGTSS 1107
>sp|A5UZK7|MUTS_ROSS1 DNA mismatch repair protein MutS OS=Roseiflexus sp. (strain RS-1)
GN=mutS PE=3 SV=1
Length = 1085
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 183/396 (46%), Gaps = 39/396 (9%)
Query: 391 VGEEWFSTLKVEEALERYHEAGAKAKAKVLELLRGLSSELQTKI-----NILVFASMLLV 445
GE +F+ + L+RY E +A+ ++++L R + + + +L A M+
Sbjct: 694 TGERYFT-----DELKRYEEIVEQAQQRLIDLERRAFARICDVVTGAGARLLRTARMIAT 748
Query: 446 IGKALFAHVSEGR-RRKWVFPALKDIELDGANCLKMNGLSPYWFDAAEGSAVHNTVDM-- 502
I +FA ++E R ++V P L D + G P + + V N ++M
Sbjct: 749 ID--VFAALAEAAVRGRYVRPEL----YDDTRLRIVGGRHPVVEQTLDETFVPNDIEMDT 802
Query: 503 --QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPA 560
+ + L+TGPN GKS++LR + +L+ G VPA++A I D I + + D A
Sbjct: 803 ETRQICLITGPNMSGKSTVLRQVALIALMAQIGSFVPADAAEIGLVDRIFTRIGAQDDIA 862
Query: 561 DGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLDN---IGCL 617
G+S+F VEM+E +++ +T RSL+++DE+ RGT T G IA ++IE + N +GC
Sbjct: 863 TGRSTFMVEMTETAALLAQSTRRSLIILDEVGRGTSTYDGMAIAQAVIEYIHNEPRLGCR 922
Query: 618 GIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVP 677
+ +TH H + L + M DG+ V +L G S A+ G+P
Sbjct: 923 TLFATHYHELTDLERTLPRLKNYHMAATEQDGRVVFLHELRPGGADRSYGIHVAELAGIP 982
Query: 678 ETIIQRAEDLYIACGVNCVMIAAREQPPPSIIGASCVYVMLRPDKKLYIGQTDDLD-GRI 736
+++I+RA +L A R PP V R D + G+ G
Sbjct: 983 QSVIRRASELL----AELERRAPRSAPP---------TVPARGDDRRSAGRASSSGAGAA 1029
Query: 737 RAHRGKEGMQSASFLYFVVPGKSIACQIETLLINQL 772
R +G+ L+ + PG I + + INQL
Sbjct: 1030 RGEQGRTLPDGQLSLFDLAPGPVIEM-LRRIDINQL 1064
>sp|Q045Q5|MUTS_LACGA DNA mismatch repair protein MutS OS=Lactobacillus gasseri (strain
ATCC 33323 / DSM 20243) GN=mutS PE=3 SV=1
Length = 857
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 123/239 (51%), Gaps = 10/239 (4%)
Query: 451 FAHVSEGRRRKWVFPALKDIELDGANCLKMNGLSPYWFDA-AEGSAVHNTVDMQ---SLF 506
FA VSE + +V P D +D +NG P GS + N V M +F
Sbjct: 550 FATVSE--QNNYVRP---DFTVDKQEINVVNGRHPVVEQVMTAGSYIPNDVKMDQDTDIF 604
Query: 507 LLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSSF 566
L+TGPN GKS+ +R + +++ G VPA+SA++P FD I + + D G+S+F
Sbjct: 605 LITGPNMSGKSTYMRQMALIAIMAQIGCFVPADSATLPIFDQIFTRIGAADDLISGQSTF 664
Query: 567 QVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DNIGCLGIVSTHLH 625
VEMSE + T RSLVL DEI RGT T G +AG+I++ L D +G + +TH H
Sbjct: 665 MVEMSEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKTLFATHYH 724
Query: 626 GIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQRA 684
+ L +K+ +G +G+ + K++ G +S A+ G+P +++ A
Sbjct: 725 ELTDLDQTLKHLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPHKVLREA 783
>sp|A1VDD9|MUTS_DESVV DNA mismatch repair protein MutS OS=Desulfovibrio vulgaris subsp.
vulgaris (strain DP4) GN=mutS PE=3 SV=1
Length = 905
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 151/305 (49%), Gaps = 19/305 (6%)
Query: 394 EWFSTLKVEEALERYHEAGAKAKAKVLELLRGLSSEL-QTKINILVFASML--LVIGKAL 450
E F+T +++E E+ A + K L + L + + + +L A ML L ++L
Sbjct: 522 ERFTTERLKELEEKLVSATDRRKTLEYRLFQSLRDTVAEARPRVLFMADMLAHLDFWQSL 581
Query: 451 FAHVSEGRRRKWVFPALKDIELDGANCLKMNGLSPYWFDAAEGSA--VHNTVDM---QSL 505
A V+ RR WV P + G + + G P +A +GSA V N + M + L
Sbjct: 582 -ADVA--RRNGWVRPDVHT----GHDIVIREGRHPV-VEAMQGSASFVPNDLRMDEKRRL 633
Query: 506 FLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSS 565
L+TGPN GKS++LR LL G VPA ASI D I + + D+ A G+S+
Sbjct: 634 LLITGPNMAGKSTVLRQTAIICLLAQMGAFVPAREASIGIADRIFSRVGASDNLAQGQST 693
Query: 566 FQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLDNIGCLGI---VST 622
F VEM E I+ + RSLV++DEI RGT T G +A +++E L GI +T
Sbjct: 694 FMVEMMETARILRQASKRSLVILDEIGRGTSTFDGMALAWAVVEELTRRAGGGIRTLFAT 753
Query: 623 HLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQ 682
H H I SL +I + +G V +LV G +S E A+ GVP +++Q
Sbjct: 754 HYHEITSLEGRIPGVHNMNIAIREWNGDIVFLRRLVPGPADKSYGIEVARLAGVPHSVVQ 813
Query: 683 RAEDL 687
RA +L
Sbjct: 814 RAREL 818
>sp|P61666|MUTS_DESVH DNA mismatch repair protein MutS OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=mutS PE=3
SV=1
Length = 905
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 151/305 (49%), Gaps = 19/305 (6%)
Query: 394 EWFSTLKVEEALERYHEAGAKAKAKVLELLRGLSSEL-QTKINILVFASML--LVIGKAL 450
E F+T +++E E+ A + K L + L + + + +L A ML L ++L
Sbjct: 522 ERFTTERLKELEEKLVSATDRRKTLEYRLFQSLRDTVAEARPRVLFMADMLAHLDFWQSL 581
Query: 451 FAHVSEGRRRKWVFPALKDIELDGANCLKMNGLSPYWFDAAEGSA--VHNTVDM---QSL 505
A V+ RR WV P + G + + G P +A +GSA V N + M + L
Sbjct: 582 -ADVA--RRNGWVRPDVHT----GHDIVIREGRHPV-VEAMQGSASFVPNDLRMDEKRRL 633
Query: 506 FLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSS 565
L+TGPN GKS++LR LL G VPA ASI D I + + D+ A G+S+
Sbjct: 634 LLITGPNMAGKSTVLRQTAIICLLAQMGAFVPAREASIGIADRIFSRVGASDNLAQGQST 693
Query: 566 FQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLDNIGCLGI---VST 622
F VEM E I+ + RSLV++DEI RGT T G +A +++E L GI +T
Sbjct: 694 FMVEMMETARILRQASKRSLVILDEIGRGTSTFDGMALAWAVVEELTRRAGGGIRTLFAT 753
Query: 623 HLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQ 682
H H I SL +I + +G V +LV G +S E A+ GVP +++Q
Sbjct: 754 HYHEITSLEGRIPGVHNMNIAIREWNGDIVFLRRLVPGPADKSYGIEVARLAGVPHSVVQ 813
Query: 683 RAEDL 687
RA +L
Sbjct: 814 RAREL 818
>sp|A7NPT5|MUTS_ROSCS DNA mismatch repair protein MutS OS=Roseiflexus castenholzii (strain
DSM 13941 / HLO8) GN=mutS PE=3 SV=1
Length = 1088
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 180/395 (45%), Gaps = 38/395 (9%)
Query: 391 VGEEWFSTLKVEEALERYHEAGAKAKAKVLELLRGLSSEL-----QTKINILVFASMLLV 445
GE +F+ + L+RY E +A+ ++++L R + + + +L A +
Sbjct: 698 TGERYFT-----DELKRYEEIVEQAQQRLIDLERRAFARICETLAGAGVRLLRTARTIAT 752
Query: 446 IGKALFAHVSEGR-RRKWVFPALKDIELDGANCLKMNGLSPYWFDAAEGSAVHNTVDM-- 502
I +FA ++E R ++V P L D + G P + + + N ++M
Sbjct: 753 ID--VFAALAEAAVRGRYVRPEL----YDDTRLRIIGGRHPVVEQTLDETFIPNDIEMDT 806
Query: 503 --QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPA 560
+ + L+TGPN GKS++LR + +L+ G VPA++A I D I + + D A
Sbjct: 807 ETRQICLITGPNMSGKSTVLRQVALIALMAQIGSFVPADAAEIGVVDRIFTRIGAQDDIA 866
Query: 561 DGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLDN---IGCL 617
G+S+F VEM+E +++ +T RSL+++DE+ RGT T G IA ++IE + N +GC
Sbjct: 867 TGRSTFMVEMTETAALLAQSTHRSLIILDEVGRGTSTYDGMAIAQAVIEYIHNEPRLGCR 926
Query: 618 GIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVP 677
+ +TH H + L + M DG+ V +L G S A+ G+P
Sbjct: 927 TLFATHYHELTDLERTLPRLKNYHMAATEQDGRVVFLHELRPGGADRSYGIHVAELAGIP 986
Query: 678 ETIIQRAEDLYIACGVNCVMIAAREQPPPSIIGASCVYVMLRPDKKLYIGQTDDLDGRIR 737
+ +I+RA +L A R P P+ RP + + D
Sbjct: 987 QPVIRRATELL----AELERRAPRSTPQPAPERTEERPAAGRPTARSHSAARGD------ 1036
Query: 738 AHRGKEGMQSASFLYFVVPGKSIACQIETLLINQL 772
R +G S L+ + PG I + L INQL
Sbjct: 1037 PPRAPDGQLS---LFDLTPGPVIEM-LRRLDINQL 1067
>sp|Q30ZX3|MUTS_DESDG DNA mismatch repair protein MutS OS=Desulfovibrio desulfuricans
(strain G20) GN=mutS PE=3 SV=1
Length = 904
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 147/304 (48%), Gaps = 17/304 (5%)
Query: 394 EWFSTLKVEEALERYHEAGAKAKAKVLELLRGLSSEL-QTKINILVFASMLLVIGKALFA 452
E +++ +++E E+ A K K L+L + L + Q + +L A +L + +
Sbjct: 522 ERYTSERLKELEEKLFSAADKRKTMELKLFQQLREHVAQARPRVLFMADLLATLDH--WQ 579
Query: 453 HVSEGRRR-KWVFPALKDIELDGANCLKMNGLSPYWFDAAEGSA--VHNTV---DMQSLF 506
++E R WV P L D G + + G P +A +G A + N + D + L
Sbjct: 580 GLAEAARHWNWVRPVLHD----GQDIVIREGRHPV-VEAVQGPAGFIPNDLRIDDQRRLL 634
Query: 507 LLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSSF 566
L+TGPN GKS++LR +L G VPA A I D I + + D+ A G+S+F
Sbjct: 635 LITGPNMAGKSTVLRQAAIICILAQIGSFVPAREARIGLCDRIFSRVGASDNLAQGQSTF 694
Query: 567 QVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL---DNIGCLGIVSTH 623
VEM E I+ T RSLV++DEI RGT T G +A +++E L G + +TH
Sbjct: 695 MVEMMETARILRQATRRSLVILDEIGRGTSTFDGLALAWAVVEELMKKQQAGIRTLFATH 754
Query: 624 LHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQR 683
H + SL I + + G+ V +LV G S E AK GVP+ ++QR
Sbjct: 755 YHELTSLEGTIPGVHNMNIAIKEWGGEIVFLRRLVPGPSDRSYGVEVAKLAGVPQNVVQR 814
Query: 684 AEDL 687
A +
Sbjct: 815 ARQI 818
>sp|Q9KAC0|MUTS_BACHD DNA mismatch repair protein MutS OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=mutS PE=3 SV=1
Length = 865
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 124/242 (51%), Gaps = 11/242 (4%)
Query: 451 FAHVSEGRRRKWVFPALKDIELDGANCLKMNGLSPYWFDA-AEGSAVHNTVDMQ---SLF 506
FA VSE +V PAL++ D A +K G P G V N VDM+ S+
Sbjct: 548 FATVSETHH--YVRPALQE---DRAIAIK-GGRHPVVERVIPNGEYVANDVDMKDGRSIL 601
Query: 507 LLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSSF 566
L+TGPN GKS+ +R + +++G G VPA+ A +P FD + + + D A G+S+F
Sbjct: 602 LITGPNMAGKSTYMRQLALIAIMGQIGCFVPADEARLPIFDQVFTRIGAADDLASGQSTF 661
Query: 567 QVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DNIGCLGIVSTHLH 625
VEM E + + T SL+L+DEI RGT T G +A +IIE + D I + STH H
Sbjct: 662 MVEMLETKYALQKATQNSLILLDEIGRGTSTYDGMALAQAIIEYIHDEIRAKTLFSTHYH 721
Query: 626 GIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQRAE 685
+ +L ++ + + G V K+VDG S A+ G+P + +RAE
Sbjct: 722 ELTALEKELSDVKNVHVSAVEEQGTVVFLHKVVDGQADRSYGIYVAELAGLPNVVTERAE 781
Query: 686 DL 687
L
Sbjct: 782 TL 783
>sp|A6W1Q6|MUTS_MARMS DNA mismatch repair protein MutS OS=Marinomonas sp. (strain MWYL1)
GN=mutS PE=3 SV=1
Length = 883
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 7/238 (2%)
Query: 501 DMQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPA 560
D +SL ++TGPN GGKS+ +R I +LL G VPAESASI D I M S D A
Sbjct: 610 DKRSLLMITGPNMGGKSTYMRQIALITLLAHTGCFVPAESASISVVDRIFTRMGSSDDLA 669
Query: 561 DGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLDN-IGCLGI 619
G+S+F VEM+E +I+ + SLVL+DE+ RGT T G +A + ++ L N + C +
Sbjct: 670 GGRSTFMVEMTETANILNNASKNSLVLMDEVGRGTSTFDGLSLAWAAVDYLANKLKCYVL 729
Query: 620 VSTHLHGIFSLPLKIKNAAYKAM-GTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPE 678
+TH + +L +++NAA + TEY D + V K+ +G +S + A+ GVP
Sbjct: 730 FATHYFELTTLADQLENAANVHLTATEYED-EIVFLHKVHEGPASQSYGLQVAQLAGVPR 788
Query: 679 TII----QRAEDLYIACGVNCVMIAAREQPPPSIIGASCVYVMLRPDKKLYIGQTDDL 732
+I Q+ ++L + G++ + S I A +++ K Y Q D+
Sbjct: 789 DVIGHAKQKLKELEVVTGIDLDTKTIETKANSSSIKAKTKEHLVKESKNGYQPQQVDM 846
>sp|P61668|MUTS_LACJO DNA mismatch repair protein MutS OS=Lactobacillus johnsonii (strain
CNCM I-12250 / La1 / NCC 533) GN=mutS PE=3 SV=1
Length = 857
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 123/239 (51%), Gaps = 10/239 (4%)
Query: 451 FAHVSEGRRRKWVFPALKDIELDGANCLKMNGLSPYWFDA-AEGSAVHNTVDMQ---SLF 506
FA VSE + +V P + D +NG P GS + N V M ++F
Sbjct: 550 FATVSE--QNNYVRP---NFVTDKQEINVVNGRHPVVEQVMTAGSYIPNDVKMDQDTNIF 604
Query: 507 LLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSSF 566
L+TGPN GKS+ +R + +++ G VPA+SA++P FD I + + D G+S+F
Sbjct: 605 LITGPNMSGKSTYMRQMALIAIMAQIGSFVPADSATLPIFDQIFTRIGAADDLISGQSTF 664
Query: 567 QVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DNIGCLGIVSTHLH 625
VEMSE + T RSLVL DEI RGT T G +AG+I++ L D +G + +TH H
Sbjct: 665 MVEMSEANDALQHATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYH 724
Query: 626 GIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQRA 684
+ L +K+ +G +G+ + K++ G +S A+ G+P +++ A
Sbjct: 725 ELTDLDQTLKHLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPHKVLREA 783
>sp|B1YMD7|MUTS_EXIS2 DNA mismatch repair protein MutS OS=Exiguobacterium sibiricum
(strain DSM 17290 / JCM 13490 / 255-15) GN=mutS PE=3
SV=1
Length = 843
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 141/287 (49%), Gaps = 19/287 (6%)
Query: 412 GAKAKAKVLE--LLRGLSSELQTKINILVFASMLLVIGKALFAHVSEGRRRKWVFPALKD 469
GA+ K+ LE L + +++T I L S + L A R +V P
Sbjct: 498 GAEEKSITLEYELFCQVRDQVKTHIESLQRVSRRIAELDVLVALAETAERHDYVRP---- 553
Query: 470 IELDGANCLKMNGLSPYWFDA-AEGSAVHNTVDM---QSLFLLTGPNGGGKSSLLRSICA 525
+ L G N + NG P G V N +++ + + L+TGPN GKS+ +R
Sbjct: 554 VTLTGRNVMIENGRHPVIETVLPRGEYVANGINLNEDREMLLITGPNMSGKSTYMRQFAL 613
Query: 526 ASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSL 585
+LL G VPA A +P FD I + + D G+S+F VEM E + +T T RSL
Sbjct: 614 IALLHQIGSFVPASRAELPIFDQIFTRIGAADDLVSGQSTFMVEMVETQEALTRATDRSL 673
Query: 586 VLIDEICRGTETAKGTCIAGSIIETL-DNIGCLGIVSTHLHGIF----SLPLKIKNAAYK 640
+L+DEI RGT T G +A +I+E + +++G + STH H + S+P ++ N +
Sbjct: 674 ILLDEIGRGTSTYDGMALAQAIVEHIAEHVGAKTLFSTHYHELTVLEDSMP-RLANVHVR 732
Query: 641 AMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQRAEDL 687
A+ DG+ V ++ DG +S A+ +P+ +I RAE L
Sbjct: 733 AVEQ---DGRVVFLHEVRDGKADQSYGIHVARLADLPDALIARAEVL 776
>sp|Q46CE2|MUTS_METBF DNA mismatch repair protein MutS OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=mutS PE=3 SV=1
Length = 900
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 13/244 (5%)
Query: 451 FAHVSEGRRRKWVFPALKDIELDGANCLKMNGLSPYWFDAAEGSAVHNTVDM----QSLF 506
A V+E ++ P L D L +G P + G V N +M
Sbjct: 580 LAEVAENN--NYIRPQLTD----DCKILIRDGRHPVVENTVHGGFVPNDTEMDCKENQFL 633
Query: 507 LLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSSF 566
L+TGPN GKS+ +R +++ G VPA ASI D + + ++D A G+S+F
Sbjct: 634 LVTGPNMAGKSTYMRQTALIAIMAQVGSFVPASYASIGIIDQVFTRIGAFDDLASGQSTF 693
Query: 567 QVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLDNIGCLGI---VSTH 623
VEM E+ +I+ + RSLVL+DEI RGT T G IA +++E L N G +G+ +TH
Sbjct: 694 MVEMVELANILNNASPRSLVLLDEIGRGTSTYDGYSIAKAVVEFLHNRGKVGVRALFATH 753
Query: 624 LHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQR 683
H + +L K+K + + + V K+V G S + A+ GVPE +I+R
Sbjct: 754 YHQLTALEEKLKRVKNYHVAVKEEGHELVFLRKIVPGATDRSYGIQVARLAGVPEKVIER 813
Query: 684 AEDL 687
A ++
Sbjct: 814 ANEI 817
>sp|P61673|MUTS_WOLPM DNA mismatch repair protein MutS OS=Wolbachia pipientis wMel
GN=mutS PE=3 SV=1
Length = 849
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 1/194 (0%)
Query: 496 VHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKS 555
+ N++++ + L+TGPN GKS+ LR ++L G VPAESA I D I + +
Sbjct: 651 IANSINLAGIHLITGPNMAGKSTFLRQNALIAILAHMGSFVPAESAHIGVIDKIFSRVGA 710
Query: 556 YDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLDNIG 615
D+ G S+F VEM E +IV T RSLV++DEI RGT G IA ++IE + N+
Sbjct: 711 TDNITAGYSTFMVEMIETATIVNQATDRSLVILDEIGRGTGVYDGLSIAQAVIEHIHNVN 770
Query: 616 -CLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKRE 674
C I +TH H + + +KN + +G+ + ++++GI ES AK
Sbjct: 771 KCRAIFATHYHELTKVSKYLKNVKCFCVKIREWNGEVIFLHEVIEGIADESYGIHVAKLA 830
Query: 675 GVPETIIQRAEDLY 688
G P++++ RA +++
Sbjct: 831 GFPDSVLNRASEVF 844
>sp|C0R5H4|MUTS_WOLWR DNA mismatch repair protein MutS OS=Wolbachia sp. subsp. Drosophila
simulans (strain wRi) GN=mutS PE=3 SV=1
Length = 854
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 1/194 (0%)
Query: 496 VHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKS 555
+ N++++ + L+TGPN GKS+ LR ++L G VPAESA I D I + +
Sbjct: 656 IANSINLAGIHLITGPNMAGKSTFLRQNALIAVLAHMGSFVPAESAHIGVIDKIFSRVGA 715
Query: 556 YDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLDNIG 615
D+ G S+F VEM E +IV T RSLV++DEI RGT G IA ++IE + N+
Sbjct: 716 TDNITAGYSTFMVEMIETATIVNQATDRSLVILDEIGRGTGVYDGLSIAQAVIEHIHNVN 775
Query: 616 -CLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKRE 674
C I +TH H + + +KN + +G+ + ++++GI ES AK
Sbjct: 776 KCRAIFATHYHELTKVSKYLKNVKCFCVKIREWNGEVIFLHEVIEGIADESYGIHVAKLA 835
Query: 675 GVPETIIQRAEDLY 688
G P++++ RA +++
Sbjct: 836 GFPDSVLNRASEVF 849
>sp|A5N8I5|MUTS_CLOK5 DNA mismatch repair protein MutS OS=Clostridium kluyveri (strain
ATCC 8527 / DSM 555 / NCIMB 10680) GN=mutS PE=3 SV=1
Length = 871
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 493 GSAVHNTVDMQS----LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDA 548
G V N D+ + L L+TGPN GKS+ +R + +++ G VPA+SASI D
Sbjct: 595 GEFVSNDTDIDTGENQLLLITGPNMAGKSTYMRQVALVTIMAQIGSFVPAKSASISICDK 654
Query: 549 IMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSII 608
I + + D A GKS+F VEM E+ +I+ T++SL+L+DE+ RGT T G IA S+I
Sbjct: 655 IFTRIGASDDLASGKSTFMVEMWEVSNILKNATNKSLILLDEVGRGTSTYDGLSIAWSVI 714
Query: 609 ETL---DNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRES 665
E + + C + +TH H + L KIK + + ++ V K++ G +S
Sbjct: 715 EYICRESKLRCKTLFATHYHELTKLEGKIKGVKNYCVSVKEVENNIVFLRKIIRGGADQS 774
Query: 666 LAFETAKREGVPETIIQRAEDL 687
E AK G+PE +++RA ++
Sbjct: 775 YGIEVAKLAGLPEEVLKRAREI 796
>sp|B9E1Z0|MUTS_CLOK1 DNA mismatch repair protein MutS OS=Clostridium kluyveri (strain
NBRC 12016) GN=mutS PE=3 SV=1
Length = 871
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 7/202 (3%)
Query: 493 GSAVHNTVDMQS----LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDA 548
G V N D+ + L L+TGPN GKS+ +R + +++ G VPA+SASI D
Sbjct: 595 GEFVSNDTDIDTGENQLLLITGPNMAGKSTYMRQVALVTIMAQIGSFVPAKSASISICDK 654
Query: 549 IMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSII 608
I + + D A GKS+F VEM E+ +I+ T++SL+L+DE+ RGT T G IA S+I
Sbjct: 655 IFTRIGASDDLASGKSTFMVEMWEVSNILKNATNKSLILLDEVGRGTSTYDGLSIAWSVI 714
Query: 609 ETL---DNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRES 665
E + + C + +TH H + L KIK + + ++ V K++ G +S
Sbjct: 715 EYICRESKLRCKTLFATHYHELTKLEGKIKGVKNYCVSVKEVENNIVFLRKIIRGGADQS 774
Query: 666 LAFETAKREGVPETIIQRAEDL 687
E AK G+PE +++RA ++
Sbjct: 775 YGIEVAKLAGLPEEVLKRAREI 796
>sp|Q5FLX5|MUTS_LACAC DNA mismatch repair protein MutS OS=Lactobacillus acidophilus
(strain ATCC 700396 / NCK56 / N2 / NCFM) GN=mutS PE=3
SV=1
Length = 856
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 110/199 (55%), Gaps = 4/199 (2%)
Query: 493 GSAVHNTVDMQS---LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAI 549
GS + N+V+M S ++L+TGPN GKS+ +R + +++ G VPA+SA +P FD I
Sbjct: 580 GSYIPNSVEMDSSTNIYLITGPNMSGKSTYMRQMALIAIMAQVGSFVPADSADLPIFDQI 639
Query: 550 MLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIE 609
+ + D G+S+F VEMSE + T RSLVL DEI RGT T G +AG+I++
Sbjct: 640 FTRIGAADDLISGQSTFMVEMSEANDALQYATKRSLVLFDEIGRGTATYDGMALAGAIVK 699
Query: 610 TL-DNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAF 668
L D +G +TH H + L + + +G +G+ + K++ G +S
Sbjct: 700 YLHDKVGAKAFFATHYHELTDLDETLDHLKNIHVGATEENGKLIFLHKILPGPADQSYGI 759
Query: 669 ETAKREGVPETIIQRAEDL 687
A+ G+P+++++ A L
Sbjct: 760 HVAQLAGLPKSVLREATKL 778
>sp|A8YTH9|MUTS_LACH4 DNA mismatch repair protein MutS OS=Lactobacillus helveticus
(strain DPC 4571) GN=mutS PE=3 SV=1
Length = 858
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 493 GSAVHNTVDMQS---LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAI 549
GS + N V M S +FL+TGPN GKS+ +R + +++ G VPA+SA++P FD I
Sbjct: 580 GSYIPNDVKMDSATNIFLITGPNMSGKSTYMRQMALIAIMAQVGSFVPADSAALPIFDQI 639
Query: 550 MLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIE 609
+ + D G+S+F VEMSE + + T RSLVL DEI RGT T G +AG+I++
Sbjct: 640 FTRIGAADDLISGQSTFMVEMSEANAALQYATKRSLVLFDEIGRGTATYDGMALAGAIVK 699
Query: 610 TL-DNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAF 668
L D +G + +TH H + SL + +G +G+ + K++ G +S
Sbjct: 700 YLHDKVGAKALFATHYHELTSLDETLDYLKNIHVGATEENGKLIFLHKILPGPADQSYGI 759
Query: 669 ETAKREGVPETIIQRAEDL 687
A+ G+P +++ A L
Sbjct: 760 HVAQLAGLPRAVLREATKL 778
>sp|P74926|MUTS_THEMA DNA mismatch repair protein MutS OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=mutS PE=3
SV=2
Length = 793
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 496 VHNTVDMQS---LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLH 552
V N + M + ++TGPN GKS+ +R + SL+ G VPA+ A +P FD I
Sbjct: 572 VENDIYMDNEKRFVVITGPNMSGKSTFIRQVGLISLMAQIGSFVPAQKAILPVFDRIFTR 631
Query: 553 MKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLD 612
M + D A G+S+F VEM+E+ I+ +T++SLVL+DE+ RGT T G IA +I E L
Sbjct: 632 MGARDDLAGGRSTFLVEMNEMALILLKSTNKSLVLLDEVGRGTSTQDGVSIAWAISEELI 691
Query: 613 NIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAK 672
GC + +TH + L K + + + T K+VDG+ S E AK
Sbjct: 692 KRGCKVLFATHFTELTELEKHFPQVQNKTILVKEEGKNVIFTHKVVDGVADRSYGIEVAK 751
Query: 673 REGVPETIIQRAEDL 687
G+P+ +I RA ++
Sbjct: 752 IAGIPDRVINRAYEI 766
>sp|A5ILG0|MUTS_THEP1 DNA mismatch repair protein MutS OS=Thermotoga petrophila (strain
RKU-1 / ATCC BAA-488 / DSM 13995) GN=mutS PE=3 SV=1
Length = 793
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 496 VHNTVDMQS---LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLH 552
V N + M + ++TGPN GKS+ +R + SL+ G VPA+ A +P FD I
Sbjct: 572 VENDIYMDNERRFVVITGPNMSGKSTFIRQVGLISLMAQIGSFVPAQKAILPVFDRIFTR 631
Query: 553 MKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLD 612
M + D A G+S+F VEM+E+ I+ +T +SLVL+DE+ RGT T G IA +I E L
Sbjct: 632 MGARDDLAGGRSTFLVEMNEMALILLKSTEKSLVLLDEVGRGTSTQDGVSIAWAISEELI 691
Query: 613 NIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAK 672
GC + +TH + L K + + + T K+VDG+ S E AK
Sbjct: 692 KRGCKVLFATHFTELTELEKHFPQVQNKTILVKEEGKNVIFTHKVVDGVADRSYGIEVAK 751
Query: 673 REGVPETIIQRA 684
G+P+ +I RA
Sbjct: 752 IAGIPDRVINRA 763
>sp|A3PFD3|MUTS_PROM0 DNA mismatch repair protein MutS OS=Prochlorococcus marinus (strain
MIT 9301) GN=mutS PE=3 SV=1
Length = 913
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
Query: 501 DMQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPA 560
D Q L +LTGPN GKS +R + +L G VPA +A I D I + + D +
Sbjct: 711 DNQKLIILTGPNASGKSCFIRQLGLIQILAQIGSFVPANNAEIKIADRIFTRIGAVDDQS 770
Query: 561 DGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DNIGCLGI 619
G+S+F VEMSE SI+ TS SLVL+DEI RGT T G IA S+ E L I C I
Sbjct: 771 SGQSTFMVEMSETASILNQATSNSLVLLDEIGRGTSTFDGLSIAWSVSEYLAKKIQCNTI 830
Query: 620 VSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPET 679
+TH H + L KN + E D Q + + ++V G +S E AK GVP+
Sbjct: 831 FATHYHELNYLKNSNKNIQNFQVLVEQNDDQLIFSHRIVRGGSNKSYGIEAAKLAGVPKE 890
Query: 680 IIQRAEDL 687
+I++A+ +
Sbjct: 891 VIEKAKSV 898
>sp|B1LAW3|MUTS_THESQ DNA mismatch repair protein MutS OS=Thermotoga sp. (strain RQ2)
GN=mutS PE=3 SV=1
Length = 793
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 496 VHNTVDMQS---LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLH 552
V N + M + ++TGPN GKS+ +R + SL+ G VPA+ A +P FD I
Sbjct: 572 VENDIYMDNEKRFVVITGPNMSGKSTFIRQVGLISLMAQIGSFVPAQKAILPVFDRIFTR 631
Query: 553 MKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLD 612
M + D A G+S+F VEM+E+ I+ +T +SLVL+DE+ RGT T G IA +I E L
Sbjct: 632 MGARDDLAGGRSTFLVEMNEMALILLKSTEKSLVLLDEVGRGTSTQDGVSIAWAISEELI 691
Query: 613 NIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAK 672
GC + +TH + L K + + + T K+VDG+ S E AK
Sbjct: 692 KRGCKVLFATHFTELTELEKHFPQVQNKTILVKEEGKNVIFTHKVVDGVADRSYGIEVAK 751
Query: 673 REGVPETIIQRA 684
G+P+ +I RA
Sbjct: 752 IAGIPDRVINRA 763
>sp|B2V1M2|MUTS_CLOBA DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Alaska E43 / Type E3) GN=mutS PE=3 SV=1
Length = 941
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 107/202 (52%), Gaps = 4/202 (1%)
Query: 489 DAAEGSAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDA 548
D + N D + L L+TGPN GKS+ +R + +L+ G VPA SA+I D
Sbjct: 593 DFVSNNTALNQTD-KELLLITGPNMAGKSTYMRQVALITLMAQMGSFVPATSANISICDK 651
Query: 549 IMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSII 608
I + + D A GKS+F VEM E+ +I+ TS SLVL+DE+ RGT T G IA S+I
Sbjct: 652 IFTRIGASDDLAGGKSTFMVEMWEVSNILKNATSNSLVLLDEVGRGTSTYDGLSIAWSVI 711
Query: 609 ETL---DNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRES 665
E + N+ C + +TH H + L + ++ + L V K+V+G ES
Sbjct: 712 EYITKNKNLRCKTLFATHYHELVKLEGILPGVKNYSVAVKKLKDSVVFLRKIVEGGADES 771
Query: 666 LAFETAKREGVPETIIQRAEDL 687
E AK G+PE +I RA ++
Sbjct: 772 YGIEVAKLAGLPENVINRAREI 793
>sp|Q2GG13|MUTS_EHRCR DNA mismatch repair protein MutS OS=Ehrlichia chaffeensis (strain
Arkansas) GN=mutS PE=3 SV=1
Length = 804
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 492 EGSAVHNTVD---MQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDA 548
G V N +D MQ + L+TGPN GKS+ LR +L G VPA+ A I D
Sbjct: 593 NGKFVANDIDLSLMQRVHLITGPNMAGKSTFLRQNALIGILAHIGSFVPAQHAHIGVIDK 652
Query: 549 IMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSII 608
+ + + D+ A G S+F VEM+E +I+ T +S V++DEI RGT T G IA S+I
Sbjct: 653 VFSRVGASDNIASGHSTFMVEMTETAAIINQATDKSFVILDEIGRGTGTYDGLSIAWSVI 712
Query: 609 ETLDNIG-CLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLA 667
E + N+ I +TH H + L ++N M E +G+ V +++ G +S
Sbjct: 713 EQIHNVNKSRAIFATHYHELSKLDRYLENIKCFCMKVEEWNGKVVFLHEIIPGSTNKSYG 772
Query: 668 FETAKREGVPETIIQRAEDL 687
AK G P++++ RAEDL
Sbjct: 773 IHVAKLAGFPQSVLDRAEDL 792
>sp|A4W4J7|MUTS_STRS2 DNA mismatch repair protein MutS OS=Streptococcus suis (strain
98HAH33) GN=mutS PE=3 SV=1
Length = 847
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 110/217 (50%), Gaps = 4/217 (1%)
Query: 494 SAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHM 553
+++H D + L+TGPN GKS+ +R + ++ G VPA+ A +P FDAI +
Sbjct: 588 NSIHLNTDTH-MQLITGPNMSGKSTYMRQLAVIVIMAQMGSYVPADQAELPIFDAIFTRI 646
Query: 554 KSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-D 612
+ D G+S+F VEM E V T RSL+L DE+ RGT T G +A SIIE + D
Sbjct: 647 GAADDLVSGQSTFMVEMMEANKAVRLATDRSLILFDELGRGTATYDGMALAQSIIEYIHD 706
Query: 613 NIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAK 672
IG + +TH H + L +++ + T DGQ K+ G +S AK
Sbjct: 707 KIGAKTLFATHYHELTDLSQTLEHLENVHVSTLEKDGQVTFLHKIAQGPADKSYGIHVAK 766
Query: 673 REGVPETIIQRAEDLYIACGVNCVMIAAREQPPPSII 709
G+PE ++QRA+ I + A P PS++
Sbjct: 767 IAGMPEELLQRAD--RILQTLENQAPTAPTHPAPSVV 801
>sp|A6LWJ5|MUTS_CLOB8 DNA mismatch repair protein MutS OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=mutS PE=3 SV=1
Length = 928
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 111/200 (55%), Gaps = 6/200 (3%)
Query: 497 HNTVDMQS---LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHM 553
+NT QS L L+TGPN GKS+ +R + +L+ G VPA SA+I D I +
Sbjct: 597 NNTTLNQSDKELLLITGPNMAGKSTYMRQVALITLMAQIGSFVPASSANISICDKIFTRI 656
Query: 554 KSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-- 611
+ D A GKS+F VEM E+ +I+ TS+SLVL+DE+ RGT T G IA S+IE +
Sbjct: 657 GASDDLAGGKSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYITG 716
Query: 612 -DNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFET 670
+N+ C + +TH H + L + ++ + + + K+V+G ES E
Sbjct: 717 NENLRCKTLFATHYHELVKLEGVLPGVKNYSVAVKKMKDSVIFLRKIVEGGADESYGIEV 776
Query: 671 AKREGVPETIIQRAEDLYIA 690
AK G+P+ +I RA+++ +
Sbjct: 777 AKLAGLPDDVINRAKEILLG 796
>sp|A8F753|MUTS_THELT DNA mismatch repair protein MutS OS=Thermotoga lettingae (strain
ATCC BAA-301 / DSM 14385 / TMO) GN=mutS PE=3 SV=1
Length = 811
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 147/316 (46%), Gaps = 9/316 (2%)
Query: 376 QIKQLKPAVDSKGRKVGEEWFSTLKVEEALERYHEAGAKAKAKVLELLRGLSSELQTKIN 435
+ ++ P K V E F T +++E ++ A + + E+ + + L +K+
Sbjct: 463 HLSKIPPNYVRKQTLVNAERFITDELKEFEQKMLTAKENLERREKEIYDEICASLSSKVG 522
Query: 436 ILVFASMLLVIGKALFAHVSEGRRRKWVFPALKDIELDGANCLKMNGLSPYWFDAAEGSA 495
+++ + L L R + P+ + DG L+ N P + +
Sbjct: 523 LIIELAEFLAQIDVLSTLAYVAIRYGYTKPSFSN---DGKLLLR-NSRHPV-VERLVDTF 577
Query: 496 VHNTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLH 552
V N ++M ++ +LTGPN GKS+ +R + S++ G VPA+ A +P FD I
Sbjct: 578 VPNDLEMDRTKNFIILTGPNMSGKSTFIRQVALVSIMAQMGSFVPADEAILPVFDRIFAK 637
Query: 553 MKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLD 612
M D A GKS+F +EM+E+ IV T SL+L+DE+ RGT T G IA ++ E L
Sbjct: 638 MGIRDDIASGKSTFLIEMNEVAKIVYQATENSLILLDEVGRGTSTFDGISIAWAVSEYLQ 697
Query: 613 N-IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETA 671
N I C I +TH + L K + Q + ++VDGI S E A
Sbjct: 698 NQISCKCIFATHFTELTELAKMYDGIVNKTVQVIEEKNQVIFLHRVVDGIADRSYGIEVA 757
Query: 672 KREGVPETIIQRAEDL 687
G+P IIQRA ++
Sbjct: 758 GIAGLPGEIIQRAREV 773
>sp|A2RP10|MUTS_LACLM DNA mismatch repair protein MutS OS=Lactococcus lactis subsp.
cremoris (strain MG1363) GN=mutS PE=3 SV=1
Length = 840
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 150/298 (50%), Gaps = 10/298 (3%)
Query: 394 EWFSTLKVEEALERYHEAGAKAKAKVLELLRGLSSELQTKINILVFASMLLVIGKALFAH 453
E F + ++ E E EA K+ + +L GL +E + I L + + L +
Sbjct: 484 ERFGSQELTEIEEIMLEAREKSSSLEYDLFMGLRAETEQYIGRLQALAKTIAEIDCLQSL 543
Query: 454 VSEGRRRKWVFPALKDIELDGANCLKMNGLSPYWFDAAEGSA--VHNTVDM---QSLFLL 508
++ ++ P L + G+ +++ G +A G+ V N +++ + L+
Sbjct: 544 SVVAEKQGYIRPTLTE----GSRIVEIKGGRHAVVEAVMGAQEYVPNDIELPEQTDIQLI 599
Query: 509 TGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSSFQV 568
TGPN GKS+ +R ++ G VPAE+A++P FDAI + + D+ G+S+F V
Sbjct: 600 TGPNMSGKSTYMRQFALTVIMAQIGSFVPAETANLPIFDAIFTRIGASDNLISGESTFMV 659
Query: 569 EMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DNIGCLGIVSTHLHGI 627
EMSE + TSRSL++ DE+ RGT T G +A +IIE + ++IG + +TH H +
Sbjct: 660 EMSEANHAIQKATSRSLIIFDELGRGTATYDGMALAQAIIEYVHEHIGAKTLFATHYHEL 719
Query: 628 FSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQRAE 685
L ++ + + T +G K+ DG +S AK G+P+T+++RA+
Sbjct: 720 TDLDKELDHLDNVHVATLEQNGNVTFLHKITDGPADKSYGIHVAKIAGLPQTLLERAD 777
>sp|Q895H2|MUTS_CLOTE DNA mismatch repair protein MutS OS=Clostridium tetani (strain
Massachusetts / E88) GN=mutS PE=3 SV=1
Length = 881
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 112/202 (55%), Gaps = 7/202 (3%)
Query: 493 GSAVHNTVDMQS----LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDA 548
GS V N M + + L+TGPN GKS+ +R + +++ G VPA+ ASI D
Sbjct: 591 GSFVANDTTMDTEDNQMLLITGPNMAGKSTYMRQVALITIMAQIGSFVPAKEASISLCDK 650
Query: 549 IMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSII 608
I + + D + GKS+F VEM E+ +I+ TS+SL+++DE+ RGT T G IA ++I
Sbjct: 651 IFTRIGASDDLSAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTFDGLSIAWAVI 710
Query: 609 ETL---DNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRES 665
E + N+ + +TH H + L KIK ++ + +D V K+++G +S
Sbjct: 711 EYICNNKNLRSKTLFATHYHELIQLENKIKGVKNYSVSVKEMDKDIVFLRKIIEGGADQS 770
Query: 666 LAFETAKREGVPETIIQRAEDL 687
E AK G+PE +I RA+++
Sbjct: 771 YGIEVAKLAGLPEDVIIRAKEI 792
>sp|Q5UYI1|MUTS2_HALMA DNA mismatch repair protein MutS 2 OS=Haloarcula marismortui
(strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
GN=mutS2 PE=3 SV=2
Length = 947
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 1/184 (0%)
Query: 505 LFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKS 564
L ++TGPN GKS+ +R + LL G VPA++A +P D + + + D A G+S
Sbjct: 654 LAVVTGPNMSGKSTYMRQVALICLLAQSGSFVPAKAADLPILDRVFTRVGASDDIAGGRS 713
Query: 565 SFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DNIGCLGIVSTH 623
+F +EM+E+ +I+ A T SLVL+DE+ RGT TA G IA ++ E L D +G + +TH
Sbjct: 714 TFMIEMTELATILDAATENSLVLLDEVGRGTSTADGLAIARAVTEYLHDEVGAYTLFATH 773
Query: 624 LHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQR 683
H + ++ + A + T DG +L G S E A GVP+++++R
Sbjct: 774 HHDLTAVAAALSGATNRHFETSREDGDVRFDHELAPGPAAASYGVEVASMAGVPDSVVER 833
Query: 684 AEDL 687
+ DL
Sbjct: 834 SRDL 837
>sp|Q3YSJ8|MUTS_EHRCJ DNA mismatch repair protein MutS OS=Ehrlichia canis (strain Jake)
GN=mutS PE=3 SV=1
Length = 804
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 492 EGSAVHNTVD---MQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDA 548
G V N +D MQ + L+TGPN GKS+ LR +L G VPA SA I D
Sbjct: 593 NGKFVANDIDLAQMQRVHLITGPNMAGKSTFLRQNALIGILAHIGSFVPAYSAHIGVIDK 652
Query: 549 IMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSII 608
I + + D+ A G S+F VEM+E +I+ T +S V++DEI RGT T G IA S+I
Sbjct: 653 IFSRVGASDNIAFGYSTFMVEMTETAAIINQATDKSFVILDEIGRGTGTYDGLSIAWSVI 712
Query: 609 ETLDNIG-CLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLA 667
E + N+ I +TH H + L ++N M E +G+ V +++ G +S
Sbjct: 713 EQIHNVNKSRAIFATHYHELSKLDECLENIKCFCMKVEEWNGKVVFLHEIIPGSTNKSYG 772
Query: 668 FETAKREGVPETIIQRAEDL 687
AK G P++++ RAEDL
Sbjct: 773 IHVAKLAGFPQSVLDRAEDL 792
>sp|A0Q0M6|MUTS_CLONN DNA mismatch repair protein MutS OS=Clostridium novyi (strain NT)
GN=mutS PE=3 SV=1
Length = 909
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 105/188 (55%), Gaps = 3/188 (1%)
Query: 503 QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADG 562
L L+TGPN GKS+ +R + +L+ G VPA+ A I D I + + D A G
Sbjct: 607 HQLLLITGPNMAGKSTYMRQVALITLMAQIGSFVPAKEAEIVICDKIFTRIGASDDLARG 666
Query: 563 KSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL---DNIGCLGI 619
KS+F VEM E+ +I+ T++SL+L+DE+ RGT T G IA ++IE + +N+ +
Sbjct: 667 KSTFMVEMWEVANILNNATNKSLILLDEVGRGTSTYDGLSIAWAVIEYICKDNNLKSKTL 726
Query: 620 VSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPET 679
+TH H + SL KIK ++ + +D + K+++G ES E AK G+P
Sbjct: 727 FATHYHELTSLEGKIKGVKNYSIAVKKVDDDIIFLRKIIEGGADESYGIEVAKLAGIPSV 786
Query: 680 IIQRAEDL 687
+ RA+++
Sbjct: 787 VTNRAKEI 794
>sp|C1CTY2|MUTS_STRZT DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain Taiwan19F-14) GN=mutS PE=3 SV=1
Length = 844
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LTQLENQGTESPPP 794
>sp|B2TIC3|MUTS_CLOBB DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Eklund 17B / Type B) GN=mutS PE=3 SV=1
Length = 942
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 107/202 (52%), Gaps = 4/202 (1%)
Query: 489 DAAEGSAVHNTVDMQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDA 548
D + N D + L L+TGPN GKS+ +R + +L+ G VPA SA+I D
Sbjct: 593 DFVSNNTALNQTD-KELLLITGPNMAGKSTYMRQVALITLMAQMGSFVPATSANISICDK 651
Query: 549 IMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSII 608
I + + D A GKS+F VEM E+ +I+ TS SLVL+DE+ RGT T G IA S+I
Sbjct: 652 IFTRIGASDDLAGGKSTFMVEMWEVSNILKNATSNSLVLLDEVGRGTSTYDGLSIAWSVI 711
Query: 609 ETL---DNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRES 665
E + ++ C + +TH H + L + ++ + L V K+V+G ES
Sbjct: 712 EYITKNKDLRCKTLFATHYHELVKLEGILPGVKNYSVAVKKLKDSVVFLRKIVEGGADES 771
Query: 666 LAFETAKREGVPETIIQRAEDL 687
E AK G+PE +I RA ++
Sbjct: 772 YGIEVAKLAGLPENVINRAREI 793
>sp|Q8PWA7|MUTS_METMA DNA mismatch repair protein MutS OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=mutS PE=3 SV=1
Length = 900
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 7/214 (3%)
Query: 481 NGLSPYWFDAAEGSAVHNTVDM----QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMV 536
+G P G V N +M L+TGPN GKS+ +R +++ G V
Sbjct: 604 DGRHPVVESTVSGGFVPNDTEMDCKENQFLLVTGPNMAGKSTYMRQTALIAIMAQAGSFV 663
Query: 537 PAESASIPYFDAIMLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTE 596
PA ASI D + + ++D A G+S+F VEM E+ +I+ + +SLVL+DEI RGT
Sbjct: 664 PASYASIGVIDQVFTRIGAFDDLASGQSTFMVEMVELANILNNASPKSLVLLDEIGRGTS 723
Query: 597 TAKGTCIAGSIIETLDNIGCLGI---VSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVP 653
T G IA +++E L N G +GI +TH H + SL K+K + + + V
Sbjct: 724 TYDGYSIAKAVVEFLHNRGKVGIRALFATHYHQLTSLEEKLKRVKNYHIAVKEEGHELVF 783
Query: 654 TWKLVDGICRESLAFETAKREGVPETIIQRAEDL 687
K+V G S A+ GVPE +I+RA ++
Sbjct: 784 LRKIVPGATDRSYGIHVARLAGVPEKVIERANEI 817
>sp|C1CN23|MUTS_STRZP DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain P1031) GN=mutS PE=3 SV=1
Length = 844
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LTQLENQGTESPPP 794
>sp|C1CH06|MUTS_STRZJ DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain JJA) GN=mutS PE=3 SV=1
Length = 844
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LTQLENQGTESPPP 794
>sp|B8ZPK0|MUTS_STRPJ DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain ATCC 700669 / Spain 23F-1) GN=mutS PE=3 SV=1
Length = 844
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LTQLENQGTESPPP 794
>sp|C1CAQ5|MUTS_STRP7 DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain 70585) GN=mutS PE=3 SV=1
Length = 844
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LTQLENQGTESPPP 794
>sp|Q04I96|MUTS_STRP2 DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
serotype 2 (strain D39 / NCTC 7466) GN=mutS PE=3 SV=1
Length = 844
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LTQLENQGTESPPP 794
>sp|P0A3R4|HEXA_STRR6 DNA mismatch repair protein HexA OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=hexA PE=3 SV=1
Length = 844
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LTQLENQGTESPPP 794
>sp|P0A3R3|HEXA_STRPN DNA mismatch repair protein HexA OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=hexA PE=3
SV=1
Length = 844
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LTQLENQGTESPPP 794
>sp|B1I9E5|MUTS_STRPI DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
(strain Hungary19A-6) GN=mutS PE=3 SV=1
Length = 844
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLVTGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSYGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LTQLENQGTESPPP 794
>sp|B5E385|MUTS_STRP4 DNA mismatch repair protein MutS OS=Streptococcus pneumoniae
serotype 19F (strain G54) GN=mutS PE=3 SV=1
Length = 844
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 9/213 (4%)
Query: 498 NTVDM---QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
NT+ M S+ L+TGPN GKS+ +R + +++ G VPAESA +P FDAI +
Sbjct: 587 NTIQMAEDTSIQLITGPNMSGKSTYMRQLAMTAVMAQLGSYVPAESAHLPIFDAIFTRIG 646
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DN 613
+ D G+S+F VEM E + ++ T SL+L DE+ RGT T G +A SIIE + ++
Sbjct: 647 AADDLVSGQSTFMVEMMEANNAISHATKNSLILFDELGRGTATYDGMALAQSIIEYIHEH 706
Query: 614 IGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
IG + +TH H + SL +++ + T DGQ K+ G +S AK
Sbjct: 707 IGAKTLFATHYHELTSLESSLQHLVNVHVATLEQDGQVTFLHKIEPGPADKSXGIHVAKI 766
Query: 674 EGVPETIIQRAEDLYIACGVNCVMIAAREQPPP 706
G+P ++ RA+ + + + E PPP
Sbjct: 767 AGLPADLLARADKI-----LXQLENQGTESPPP 794
>sp|B1KSA3|MUTS_CLOBM DNA mismatch repair protein MutS OS=Clostridium botulinum (strain
Loch Maree / Type A3) GN=mutS PE=3 SV=1
Length = 932
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 3/188 (1%)
Query: 503 QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADG 562
L L+TGPN GKS+ +R + +++ G VPA+ A+I D I + + D A G
Sbjct: 608 NQLILITGPNMAGKSTYMRQVALITIMAQIGSFVPAKEANISICDKIFTRIGASDDLAAG 667
Query: 563 KSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL---DNIGCLGI 619
KS+F VEM E+ +I+ TS+SLVL+DE+ RGT T G IA S+IE + N+ C +
Sbjct: 668 KSTFMVEMWEVSNILKNATSKSLVLLDEVGRGTSTYDGLSIAWSVIEYICNNKNLRCKTL 727
Query: 620 VSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPET 679
+TH H + L IK ++ L+ + V K++ G +S E AK G+P
Sbjct: 728 FATHYHELTKLEDNIKGVKNYSVSVSELENEIVFLRKIIRGGADQSYGIEVAKLAGLPSP 787
Query: 680 IIQRAEDL 687
+I RA+++
Sbjct: 788 VINRAKEI 795
>sp|Q1MRT4|MUTS_LAWIP DNA mismatch repair protein MutS OS=Lawsonia intracellularis
(strain PHE/MN1-00) GN=mutS PE=3 SV=1
Length = 893
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 148/302 (49%), Gaps = 17/302 (5%)
Query: 394 EWFSTLKVEEALERYHEAGAKAKAKVLELLRGLSSELQT-KINILVFASMLLVIGKALFA 452
E ++T ++++ ER A K +L + L EL + + IL AS++ + L+
Sbjct: 522 ERYTTEELKDLEERLLSATEKRNTLEYKLFQKLREELVSIRPRILFMASLIAQLD--LWQ 579
Query: 453 HVSE-GRRRKWVFPALKDIELDGANCLKMNGLSPYWFDAAEGSAVHNTVDM-----QSLF 506
+++ R W P L L N G P ++ G +V D+ + +
Sbjct: 580 SLADVAIRHNWNKPTL----LTNNNIFIREGRHPV-IESIIGKSVFVPNDLVMDETRRML 634
Query: 507 LLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPADGKSSF 566
L+TGPN GKS++LR LL G VPA A I D I + + D+ A G+S+F
Sbjct: 635 LITGPNMAGKSTVLRQTAIICLLAHMGSFVPATEAQIGICDRIFSRVGASDNLARGQSTF 694
Query: 567 QVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL---DNIGCLGIVSTH 623
VEM E I+ TSRSLV++DEI RGT T G +A ++ E L D+ G + +TH
Sbjct: 695 MVEMMETARILRQATSRSLVILDEIGRGTSTFDGLALAWAVAEDLVCKDHDGVRTLFATH 754
Query: 624 LHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPETIIQR 683
H + +L K+ + + + + V ++L+ G S E A+ GVP+++IQR
Sbjct: 755 YHELTALEEKLTGVHTMTIAIRHWNDELVFLYRLIPGPADRSYGIEVARLAGVPQSVIQR 814
Query: 684 AE 685
A+
Sbjct: 815 AK 816
>sp|A2BTM6|MUTS_PROMS DNA mismatch repair protein MutS OS=Prochlorococcus marinus (strain
AS9601) GN=mutS PE=3 SV=1
Length = 913
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 101/188 (53%), Gaps = 1/188 (0%)
Query: 501 DMQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPA 560
D Q L +LTGPN GKS +R + +L G VPA +A I D I + + D +
Sbjct: 711 DNQKLIILTGPNASGKSCFIRQLGLIQILTQIGSFVPANNAEIKIADRIFTRIGAVDDQS 770
Query: 561 DGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL-DNIGCLGI 619
G+S+F VEMSE SI+ TS SLVL+DEI RGT T G IA S+ E L I C I
Sbjct: 771 SGQSTFMVEMSETASILNQATSSSLVLLDEIGRGTSTFDGLSIAWSVSEYLAKKIQCNTI 830
Query: 620 VSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVPET 679
+TH H + L KN + E + Q + + ++V G +S E AK GVP+
Sbjct: 831 FATHYHELNYLKNTNKNIQNFQVLVEQNNDQLIFSHRIVKGGSNKSYGIEAAKLAGVPKE 890
Query: 680 IIQRAEDL 687
+I++A+ +
Sbjct: 891 VIEKAKSV 898
>sp|Q048Y4|MUTS_LACDB DNA mismatch repair protein MutS OS=Lactobacillus delbrueckii
subsp. bulgaricus (strain ATCC BAA-365) GN=mutS PE=3
SV=1
Length = 856
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 4/199 (2%)
Query: 493 GSAVHNTVDMQ---SLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAI 549
GS + N + M S++L+TGPN GKS+ +R + +++ G VPA+SA +P FD I
Sbjct: 587 GSYIPNDLVMDEDTSIYLITGPNMSGKSTYMRQLALIAIMAQIGSFVPADSAKLPVFDQI 646
Query: 550 MLHMKSYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIE 609
+ + D GKS+F VEMSE + +SRSLVL DEI RGT T G +AG+II+
Sbjct: 647 FTRIGAADDLYSGKSTFMVEMSEANEALQHASSRSLVLFDEIGRGTATYDGMALAGAIIK 706
Query: 610 TL-DNIGCLGIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAF 668
L D +G + +TH H + L + + +G +G+ + K++ G +S
Sbjct: 707 YLHDKVGAKTLFATHYHELTELDETLLHLKNIHVGATEENGKLIFLHKILPGPADQSYGI 766
Query: 669 ETAKREGVPETIIQRAEDL 687
AK G+P +++ A +
Sbjct: 767 HVAKLAGLPRAVLREASSM 785
>sp|Q8XL87|MUTS_CLOPE DNA mismatch repair protein MutS OS=Clostridium perfringens (strain
13 / Type A) GN=mutS PE=3 SV=1
Length = 909
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Query: 501 DMQSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMKSYDSPA 560
D L ++TGPN GKS+ +R + +L+ G VPA A+I D I + + D A
Sbjct: 606 DDNQLLIITGPNMAGKSTYMRQVAIITLMCQIGSFVPASKANISVVDKIFTRIGASDDLA 665
Query: 561 DGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETL---DNIGCL 617
GKS+F VEM E+ +I+ T SLVL+DE+ RGT T G IA S+IE + N+ C
Sbjct: 666 GGKSTFMVEMWEVSNILKNATENSLVLLDEVGRGTSTYDGLSIAWSVIEYICKNKNLRCK 725
Query: 618 GIVSTHLHGIFSLPLKIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKREGVP 677
+ +TH H + L +I ++ + +D + K+++G +S E AK G+P
Sbjct: 726 TLFATHYHELTKLEGEIHGVRNYSVAVKEVDNNIIFLRKIIEGGADQSYGIEVAKLAGIP 785
Query: 678 ETIIQRAEDL 687
+ +I RA+++
Sbjct: 786 DDVINRAKEI 795
>sp|P61671|MUTS_THET2 DNA mismatch repair protein MutS OS=Thermus thermophilus (strain
HB27 / ATCC BAA-163 / DSM 7039) GN=mutS PE=3 SV=1
Length = 811
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 5/201 (2%)
Query: 496 VHNTVDM-QSLFLLTGPNGGGKSSLLRSICAASLLGICGLMVPAESASIPYFDAIMLHMK 554
V N ++M L L+TGPN GKS+ LR +LL G VPAE A +P FD I +
Sbjct: 568 VPNDLEMAHELVLVTGPNMAGKSTFLRQTALIALLAQIGSFVPAEEAELPLFDGIYTRIG 627
Query: 555 SYDSPADGKSSFQVEMSEIRSIVTATTSRSLVLIDEICRGTETAKGTCIAGSIIETLDNI 614
+ D A GKS+F VEM E+ ++ T RSLVL+DE+ RGT + G IA ++ E L
Sbjct: 628 ASDDLAGGKSTFMVEMEEVALVLKEATERSLVLLDEVGRGTSSLDGVAIATALAEALHER 687
Query: 615 GCLGIVSTHLHGIFSLPL-KIKNAAYKAMGTEYLDGQTVPTWKLVDGICRESLAFETAKR 673
C + +TH + +L L ++KN A E G V +++ G +S E A+
Sbjct: 688 RCYTLFATHYFELTALALPRLKNLHVAAKEEE---GGLVFYHQVLPGPASKSYGVEVAEM 744
Query: 674 EGVPETIIQRAEDLYIACGVN 694
G+P+ +++RA L A
Sbjct: 745 AGLPKEVVERARALLSAMAAR 765
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 294,935,723
Number of Sequences: 539616
Number of extensions: 12411787
Number of successful extensions: 36376
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 34759
Number of HSP's gapped (non-prelim): 961
length of query: 803
length of database: 191,569,459
effective HSP length: 126
effective length of query: 677
effective length of database: 123,577,843
effective search space: 83662199711
effective search space used: 83662199711
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)