Query 003693
Match_columns 802
No_of_seqs 246 out of 1251
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 04:14:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003693.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003693hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2099 Glycogen phosphorylase 100.0 6E-251 1E-255 2026.0 51.0 778 11-801 7-796 (843)
2 TIGR02093 P_ylase glycogen/sta 100.0 3E-238 6E-243 2045.1 65.7 751 36-801 1-761 (794)
3 cd04300 GT1_Glycogen_Phosphory 100.0 4E-236 9E-241 2034.1 67.8 754 33-801 1-764 (797)
4 PRK14985 maltodextrin phosphor 100.0 6E-236 1E-240 2022.8 66.3 753 27-801 5-763 (798)
5 PRK14986 glycogen phosphorylas 100.0 4E-234 1E-238 2013.8 69.8 762 23-801 8-777 (815)
6 PF00343 Phosphorylase: Carboh 100.0 5E-214 1E-218 1826.2 45.0 670 116-801 1-678 (713)
7 COG0058 GlgP Glucan phosphoryl 100.0 1E-189 3E-194 1623.7 44.6 702 28-801 5-715 (750)
8 cd04299 GT1_Glycogen_Phosphory 100.0 5E-132 1E-136 1168.8 44.8 557 84-767 85-692 (778)
9 TIGR02094 more_P_ylases alpha- 100.0 2E-131 4E-136 1145.5 39.3 550 87-763 1-598 (601)
10 COG0297 GlgA Glycogen synthase 100.0 3.1E-44 6.8E-49 406.6 21.5 380 259-769 83-481 (487)
11 PLN02939 transferase, transfer 100.0 2.7E-41 5.9E-46 400.9 26.7 494 52-768 450-969 (977)
12 PRK14098 glycogen synthase; Pr 100.0 6.1E-41 1.3E-45 383.3 21.9 451 133-768 16-488 (489)
13 PRK14099 glycogen synthase; Pr 100.0 2.7E-38 5.9E-43 361.2 22.6 386 246-768 70-481 (485)
14 TIGR02095 glgA glycogen/starch 100.0 7.3E-37 1.6E-41 346.7 22.3 442 134-766 12-473 (473)
15 PRK00654 glgA glycogen synthas 100.0 7E-36 1.5E-40 339.0 22.4 438 133-768 11-465 (466)
16 cd03791 GT1_Glycogen_synthase_ 100.0 1E-35 2.3E-40 335.7 23.0 452 131-764 8-475 (476)
17 PLN02316 synthase/transferase 100.0 7.3E-33 1.6E-37 334.0 24.6 411 137-767 602-1035(1036)
18 PF08323 Glyco_transf_5: Starc 99.8 1.6E-20 3.5E-25 197.5 4.7 222 136-477 13-243 (245)
19 cd03793 GT1_Glycogen_synthase_ 99.4 6.4E-12 1.4E-16 145.3 17.7 226 440-717 216-528 (590)
20 TIGR02470 sucr_synth sucrose s 99.3 2.8E-11 6.1E-16 145.0 15.3 190 555-767 541-745 (784)
21 TIGR02149 glgA_Coryne glycogen 99.2 9.3E-11 2E-15 128.2 13.8 236 445-767 139-388 (388)
22 PLN00142 sucrose synthase 99.2 2.3E-10 5E-15 137.4 15.3 191 555-767 564-768 (815)
23 TIGR02472 sucr_P_syn_N sucrose 99.1 9.8E-10 2.1E-14 124.5 14.3 182 561-766 245-437 (439)
24 cd03796 GT1_PIG-A_like This fa 99.0 2.7E-09 5.9E-14 118.7 15.5 191 561-789 190-385 (398)
25 TIGR03449 mycothiol_MshA UDP-N 99.0 4.6E-09 1E-13 116.3 16.6 235 448-767 161-403 (405)
26 TIGR02468 sucrsPsyn_pln sucros 98.9 3.7E-09 8E-14 129.6 12.6 183 561-768 476-673 (1050)
27 cd03813 GT1_like_3 This family 98.9 2.7E-08 5.9E-13 114.1 15.1 196 442-728 236-436 (475)
28 cd03819 GT1_WavL_like This fam 98.7 2.6E-07 5.6E-12 99.0 14.9 145 555-728 178-324 (355)
29 cd04962 GT1_like_5 This family 98.7 2.7E-07 5.8E-12 100.0 14.3 137 560-728 193-330 (371)
30 cd03821 GT1_Bme6_like This fam 98.7 4.4E-07 9.6E-12 95.7 15.1 140 561-728 200-339 (375)
31 cd03788 GT1_TPS Trehalose-6-Ph 98.6 3.3E-07 7.2E-12 105.2 13.5 152 562-728 262-421 (460)
32 cd03822 GT1_ecORF704_like This 98.5 1.1E-06 2.4E-11 93.5 14.6 141 562-728 183-328 (366)
33 PRK10307 putative glycosyl tra 98.5 2.5E-06 5.5E-11 95.3 18.1 235 446-768 167-410 (412)
34 cd03800 GT1_Sucrose_synthase T 98.5 1.1E-06 2.4E-11 95.7 13.1 145 561-728 217-362 (398)
35 cd04951 GT1_WbdM_like This fam 98.5 2.5E-06 5.5E-11 91.3 15.0 168 561-763 185-358 (360)
36 cd03807 GT1_WbnK_like This fam 98.5 2.5E-06 5.5E-11 89.6 14.6 137 560-728 189-326 (365)
37 cd03825 GT1_wcfI_like This fam 98.4 2.4E-06 5.2E-11 91.6 14.2 168 561-765 188-364 (365)
38 TIGR03088 stp2 sugar transfera 98.4 9.3E-07 2E-11 96.8 10.3 177 562-767 192-374 (374)
39 PRK15490 Vi polysaccharide bio 98.4 4E-06 8.6E-11 97.9 15.4 129 562-721 396-524 (578)
40 cd03809 GT1_mtfB_like This fam 98.4 5E-06 1.1E-10 88.4 14.5 138 561-728 192-330 (365)
41 PLN02871 UDP-sulfoquinovose:DA 98.4 3.9E-06 8.4E-11 96.0 14.4 168 561-768 260-437 (465)
42 PRK15179 Vi polysaccharide bio 98.4 5.1E-06 1.1E-10 99.9 15.3 171 561-764 514-692 (694)
43 cd03792 GT1_Trehalose_phosphor 98.4 2E-06 4.3E-11 94.7 11.0 145 555-726 183-329 (372)
44 cd03798 GT1_wlbH_like This fam 98.3 1E-05 2.3E-10 84.7 15.5 166 561-758 199-365 (377)
45 cd05844 GT1_like_7 Glycosyltra 98.3 4.8E-06 1.1E-10 90.0 13.2 138 564-728 188-330 (367)
46 PF05693 Glycogen_syn: Glycoge 98.3 9.6E-06 2.1E-10 94.6 15.9 287 304-700 122-503 (633)
47 cd03812 GT1_CapH_like This fam 98.3 9.7E-06 2.1E-10 87.1 14.5 137 560-728 188-325 (358)
48 cd03799 GT1_amsK_like This is 98.3 1.5E-05 3.2E-10 85.2 14.5 140 562-728 177-321 (355)
49 cd03801 GT1_YqgM_like This fam 98.2 4.2E-05 9.1E-10 79.7 15.9 139 561-728 196-335 (374)
50 PRK15484 lipopolysaccharide 1, 98.2 1.1E-05 2.3E-10 90.1 11.6 145 561-728 190-338 (380)
51 cd03805 GT1_ALG2_like This fam 98.2 1.1E-05 2.3E-10 88.6 11.4 151 561-728 208-358 (392)
52 TIGR02400 trehalose_OtsA alpha 98.1 4.1E-05 9E-10 88.2 16.2 151 563-728 258-416 (456)
53 cd03818 GT1_ExpC_like This fam 98.1 1E-05 2.2E-10 90.1 9.5 203 445-728 151-360 (396)
54 PF00534 Glycos_transf_1: Glyc 98.0 2.3E-05 5E-10 76.4 8.5 141 560-728 11-152 (172)
55 cd03795 GT1_like_4 This family 98.0 2E-05 4.3E-10 84.3 8.2 137 562-728 189-326 (357)
56 cd01635 Glycosyltransferase_GT 97.9 2.6E-05 5.6E-10 77.1 7.9 120 569-717 109-229 (229)
57 cd03816 GT1_ALG1_like This fam 97.9 0.00029 6.3E-09 79.7 17.2 144 562-728 230-375 (415)
58 PRK15427 colanic acid biosynth 97.9 5E-05 1.1E-09 85.8 9.8 138 564-728 222-364 (406)
59 PHA01633 putative glycosyl tra 97.9 7.5E-05 1.6E-09 82.9 10.9 113 562-705 146-261 (335)
60 cd03808 GT1_cap1E_like This fa 97.9 4.1E-05 8.9E-10 80.1 8.3 138 561-728 185-323 (359)
61 PRK14501 putative bifunctional 97.8 0.0013 2.8E-08 80.1 21.6 189 562-768 263-465 (726)
62 cd03817 GT1_UGDG_like This fam 97.8 5.8E-05 1.3E-09 79.8 8.7 139 561-728 199-337 (374)
63 PLN02949 transferase, transfer 97.7 0.0002 4.4E-09 82.7 11.4 147 563-728 267-416 (463)
64 cd03806 GT1_ALG11_like This fa 97.5 0.00038 8.2E-09 79.1 10.6 150 562-728 235-386 (419)
65 cd04955 GT1_like_6 This family 97.5 0.00015 3.2E-09 77.9 6.8 124 565-721 194-318 (363)
66 cd03802 GT1_AviGT4_like This f 97.5 0.00037 8.1E-09 74.1 9.4 132 564-728 171-302 (335)
67 PLN03063 alpha,alpha-trehalose 97.5 0.0016 3.5E-08 80.0 15.4 152 563-728 278-437 (797)
68 cd03811 GT1_WabH_like This fam 97.4 0.00047 1E-08 71.8 8.9 131 560-721 185-315 (353)
69 cd03794 GT1_wbuB_like This fam 97.4 0.00059 1.3E-08 72.2 9.3 137 561-728 217-359 (394)
70 cd03804 GT1_wbaZ_like This fam 97.3 0.00049 1.1E-08 74.8 7.8 124 565-728 196-320 (351)
71 cd03823 GT1_ExpE7_like This fa 97.3 0.0011 2.5E-08 69.9 9.7 134 562-728 189-323 (359)
72 cd03820 GT1_amsD_like This fam 97.3 0.00049 1.1E-08 71.6 6.6 136 562-728 176-313 (348)
73 TIGR02398 gluc_glyc_Psyn gluco 97.3 0.012 2.5E-07 68.8 18.3 157 552-728 278-442 (487)
74 cd03814 GT1_like_2 This family 97.2 0.00095 2.1E-08 70.8 8.3 131 562-728 195-326 (364)
75 cd04946 GT1_AmsK_like This fam 97.2 0.0012 2.7E-08 74.5 9.4 139 563-728 229-371 (407)
76 TIGR02918 accessory Sec system 97.1 0.00098 2.1E-08 77.8 7.8 122 565-718 320-442 (500)
77 PRK10125 putative glycosyl tra 97.0 0.0013 2.9E-08 74.5 7.0 157 562-766 239-405 (405)
78 cd04949 GT1_gtfA_like This fam 96.9 0.002 4.3E-08 70.6 7.6 134 564-728 204-339 (372)
79 PHA01630 putative group 1 glyc 96.6 0.0062 1.4E-07 67.4 8.4 116 564-717 142-257 (331)
80 PRK09922 UDP-D-galactose:(gluc 96.3 0.015 3.2E-07 64.1 9.2 133 564-728 180-318 (359)
81 TIGR03087 stp1 sugar transfera 96.2 0.016 3.4E-07 64.8 8.9 134 562-728 222-356 (397)
82 PLN02846 digalactosyldiacylgly 96.2 0.018 4E-07 66.8 9.5 130 564-728 228-357 (462)
83 KOG1111 N-acetylglucosaminyltr 96.1 0.023 4.9E-07 63.3 9.0 119 562-707 193-311 (426)
84 PLN02275 transferase, transfer 96.0 0.035 7.6E-07 61.9 10.2 145 565-728 214-367 (371)
85 PLN02501 digalactosyldiacylgly 95.9 0.023 5E-07 68.4 8.7 136 555-727 539-674 (794)
86 PF11897 DUF3417: Protein of u 95.4 0.0086 1.9E-07 57.2 2.1 43 55-100 74-118 (118)
87 PF13692 Glyco_trans_1_4: Glyc 95.0 0.064 1.4E-06 50.1 6.8 128 563-728 1-129 (135)
88 COG0438 RfaG Glycosyltransfera 94.2 0.35 7.6E-06 49.3 10.5 136 564-728 199-336 (381)
89 KOG3742 Glycogen synthase [Car 93.3 0.35 7.5E-06 55.3 9.0 273 333-697 175-530 (692)
90 PLN03064 alpha,alpha-trehalose 92.7 3 6.4E-05 52.7 16.8 147 564-728 363-521 (934)
91 PRK10117 trehalose-6-phosphate 87.8 19 0.00042 42.4 16.8 149 564-728 255-413 (474)
92 cd04950 GT1_like_1 Glycosyltra 87.5 2.2 4.9E-05 47.5 8.9 162 563-766 204-369 (373)
93 PLN02205 alpha,alpha-trehalose 81.4 67 0.0015 40.7 18.5 136 562-705 337-493 (854)
94 PF00982 Glyco_transf_20: Glyc 77.1 27 0.00058 41.2 12.6 147 564-728 276-434 (474)
95 PRK05749 3-deoxy-D-manno-octul 75.3 8.6 0.00019 43.5 7.8 146 563-728 232-382 (425)
96 TIGR00236 wecB UDP-N-acetylglu 64.6 30 0.00065 38.2 9.0 72 647-728 256-328 (365)
97 PRK00025 lpxB lipid-A-disaccha 64.5 30 0.00066 38.2 9.0 108 555-699 179-288 (380)
98 KOG0853 Glycosyltransferase [C 64.4 41 0.00088 39.9 10.2 147 561-722 270-418 (495)
99 PF13579 Glyco_trans_4_4: Glyc 55.5 5.8 0.00013 36.9 1.2 36 331-381 72-107 (160)
100 cd03786 GT1_UDP-GlcNAc_2-Epime 52.2 83 0.0018 34.3 9.7 137 555-728 192-331 (363)
101 TIGR01133 murG undecaprenyldip 51.9 55 0.0012 35.4 8.2 60 660-728 245-315 (348)
102 COG0380 OtsA Trehalose-6-phosp 50.3 19 0.00041 42.5 4.5 133 564-707 282-423 (486)
103 TIGR00215 lpxB lipid-A-disacch 48.4 78 0.0017 35.9 9.0 112 555-703 184-298 (385)
104 TIGR03713 acc_sec_asp1 accesso 37.0 1.8E+02 0.0039 34.8 9.9 163 562-750 319-501 (519)
105 cd01635 Glycosyltransferase_GT 34.6 68 0.0015 31.3 5.1 46 331-390 50-95 (229)
106 TIGR02919 accessory Sec system 31.9 85 0.0018 36.7 6.0 49 647-697 329-377 (438)
107 PLN02605 monogalactosyldiacylg 30.2 1.5E+02 0.0033 33.2 7.6 111 554-698 198-309 (382)
108 PF13439 Glyco_transf_4: Glyco 29.3 71 0.0015 30.0 4.1 40 448-493 137-176 (177)
109 PF13477 Glyco_trans_4_2: Glyc 29.1 65 0.0014 30.0 3.8 35 332-380 74-109 (139)
110 cd03785 GT1_MurG MurG is an N- 28.4 1.7E+02 0.0036 31.7 7.3 72 647-728 236-318 (350)
111 PF14407 Frankia_peptide: Ribo 25.4 20 0.00043 30.7 -0.4 41 92-132 2-42 (61)
112 PF00814 Peptidase_M22: Glycop 25.0 39 0.00084 36.7 1.6 55 108-164 32-89 (268)
113 cd00127 DSPc Dual specificity 24.7 59 0.0013 30.5 2.6 37 331-371 81-120 (139)
114 PF09659 Cas_Csm6: CRISPR-asso 23.4 30 0.00065 39.6 0.4 22 663-690 38-59 (382)
115 PRK00726 murG undecaprenyldiph 22.8 2.3E+02 0.0049 31.1 7.1 100 561-700 180-281 (357)
116 TIGR02672 cas_csm6 CRISPR-asso 22.6 34 0.00074 38.7 0.6 33 663-701 41-83 (362)
117 COG5405 HslV ATP-dependent pro 21.7 64 0.0014 32.9 2.2 39 348-386 134-176 (178)
118 PF00782 DSPc: Dual specificit 21.5 1.2E+02 0.0027 28.2 4.1 36 332-371 74-112 (133)
119 KOG2387 CTP synthase (UTP-ammo 20.5 8.9E+02 0.019 28.8 11.0 134 544-707 258-411 (585)
No 1
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-251 Score=2025.99 Aligned_cols=778 Identities=52% Similarity=0.881 Sum_probs=754.8
Q ss_pred hhhhhcccccccCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEE
Q 003693 11 EAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYL 90 (802)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~gk~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYl 90 (802)
+.++|+|||++..+...++.+++++|.+|+++++.+++..+++.+.|.|+|.+|||.|..+|++|+++|.+.++||||||
T Consensus 7 ~~~~r~qis~r~~~~~~~~~e~~~~f~~H~~ftl~k~~~~~~~~~~yfA~a~tvRD~Lv~~W~rTqqhy~~~dpKrvYYL 86 (843)
T KOG2099|consen 7 DSEKRKQISVRGIAGVEDVAEVKKSFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRVYYL 86 (843)
T ss_pred ccchhhhcchhcccCCccHHHHHHHHHhheeeeeecCcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeEe
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCcc
Q 003693 91 SMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGL 170 (802)
Q Consensus 91 SmEfl~Gr~L~nnl~NLg~~~~~~eaL~~~g~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~ 170 (802)
||||+|||+|.|.++||||.+.+.|||.+||+|+|+|.|+|+||||||||||||||||||||||||+|++||||||+||+
T Consensus 87 SlEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGi 166 (843)
T KOG2099|consen 87 SLEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGI 166 (843)
T ss_pred ehHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeeCCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEE
Q 003693 171 FKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLW 250 (802)
Q Consensus 171 F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~~~~~~g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw 250 (802)
|+|+|.+|||+|.||+||+.|||||+.||++++||+|||+|+..++| .+|++++.|.|+|||+|||||+|++||+||||
T Consensus 167 F~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLW 245 (843)
T KOG2099|consen 167 FKQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLW 245 (843)
T ss_pred HHHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeee
Confidence 99999999999999999999999999999999999999999987777 57999999999999999999999999999999
Q ss_pred EeecCCCCccccccCcchhhhHHhhhhhhccccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHccc------C
Q 003693 251 DAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKS------G 324 (802)
Q Consensus 251 ~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g------~ 324 (802)
+|+ ++++|+|..||.|+|.+||.+++.+|+||.+|||+|+..+||+||||||||+|+|+||||||||+...+ .
T Consensus 246 sak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~~ 324 (843)
T KOG2099|consen 246 SAK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPVR 324 (843)
T ss_pred ccC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCcccccc
Confidence 999 777999999999999999999999999999999999999999999999999999999999999986543 1
Q ss_pred cccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHH
Q 003693 325 RQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEII 404 (802)
Q Consensus 325 ~~l~~l~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii 404 (802)
..+++||++++||||||||+|+||||||+|||.+|++|++||+||.+||+|||||++|||+|+||++||+++||||+|||
T Consensus 325 ~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleII 404 (843)
T KOG2099|consen 325 TNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEII 404 (843)
T ss_pred cchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHH
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCcccc
Q 003693 405 EEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNK 484 (802)
Q Consensus 405 ~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~i 484 (802)
|+||.+|++.+.+.||.|.|++++|||++++++..+||||+|||++||+||||+++|++++|+++|+||+++||+||+|+
T Consensus 405 y~In~~~l~~i~~~fp~D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFqNk 484 (843)
T KOG2099|consen 405 YEINQRFLQTVAAKFPGDVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQNK 484 (843)
T ss_pred HHHHHHHHHHHHHHCCCcHHHHhhhhhhhcCCccceeeeeeeeeecccccccHHHHHHHHHHHHHHHHHHHhChHHhccc
Confidence 99999999999999999999999999999832222999999999999999999999999999999999999999999999
Q ss_pred ccccCccccccccChhHHHHHHHhcCccccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc
Q 003693 485 TNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNS 564 (802)
Q Consensus 485 TNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~ 564 (802)
||||||||||..|||.|+++|++.|| ++|++|+++|.+|+++++|++|+++|+++|++||.+|+.||++++|+.+||++
T Consensus 485 TNGITPRRWL~~cnP~LadlI~e~ig-e~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~s 563 (843)
T KOG2099|consen 485 TNGITPRRWLLLCNPGLADLITEKIG-EEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSS 563 (843)
T ss_pred cCCcCHHHHHHhcCchHHHHHHHHhh-hHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcch
Confidence 99999999999999999999999999 69999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 003693 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (802)
Q Consensus 565 lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~ 644 (802)
+||+|||||||||||+||+||+++||++||+ +|.. .++||++||||||+|+|++||.|||+|+++|+++|+||.|.+
T Consensus 564 mFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~k--~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd 640 (843)
T KOG2099|consen 564 MFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPAK--AFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGD 640 (843)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhh--ccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhh
Confidence 9999999999999999999999999999998 7764 689999999999999999999999999999999999999999
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccccchH
Q 003693 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQV 724 (802)
Q Consensus 645 ~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~~ev 724 (802)
+|||+|+|||+||+||+||||||+|+||||||+||||||||||||||+|+|||+|||||||.|++|++|+||||+++++|
T Consensus 641 ~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e~V 720 (843)
T KOG2099|consen 641 RLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVEDV 720 (843)
T ss_pred eeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCcccEEEecccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCC---CCCChHHHHHHHHHHcCCCCCCC---hHHHHHHHhhCCCCCCCCcccccCCcHHHHHHHHHHHHHh
Q 003693 725 PKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAY 798 (802)
Q Consensus 725 ~~~~~~~~~~~---~~~~~~l~~v~~~m~~g~fs~~~---f~~ly~~l~~~~~~~~~D~y~~~~Df~~y~~~~~~~~~~y 798 (802)
..+.++| |+. |.+.|.++.|++.|.+|.||+++ |.++.+.+..+ |+|+|++||+||++||++|+++|
T Consensus 721 ~~L~k~g-y~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~h------D~f~V~~Df~sYi~~q~kVd~~y 793 (843)
T KOG2099|consen 721 EALRKKG-YNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMYH------DYFLVFADFEAYIKCQEKVDQLY 793 (843)
T ss_pred HHHHhhc-ccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhcc------ceEEeeCcHHHHHHHHHHHHHHH
Confidence 9999665 765 47799999999999999999986 88999998875 99999999999999999999999
Q ss_pred ccC
Q 003693 799 KRS 801 (802)
Q Consensus 799 ~d~ 801 (802)
+|+
T Consensus 794 ~nq 796 (843)
T KOG2099|consen 794 RNQ 796 (843)
T ss_pred hCH
Confidence 986
No 2
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=100.00 E-value=2.6e-238 Score=2045.06 Aligned_cols=751 Identities=55% Similarity=0.911 Sum_probs=730.8
Q ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEehhccccchhHHhhccChHHHHHH
Q 003693 36 ISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYAD 115 (802)
Q Consensus 36 i~~~l~~~~gk~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~NLg~~~~~~e 115 (802)
|.+||++++|+++++||+.++|.|||.+|||+++++|.+|++.+.+.++|+||||||||||||+|.|||+|||+++++++
T Consensus 1 ~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~nlgl~~~~~~ 80 (794)
T TIGR02093 1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80 (794)
T ss_pred CHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEehhhhcchHHHHHHHhCCCHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcc
Q 003693 116 ALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWE 195 (802)
Q Consensus 116 aL~~~g~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe 195 (802)
||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+|+..++|||
T Consensus 81 ~l~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe 160 (794)
T TIGR02093 81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160 (794)
T ss_pred HHHHhCCCHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCceEEEEECCEEEEcCCCcCCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeEEEEeCCeEEEcCC-Ccee--eeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcchhhhH
Q 003693 196 VVRHDVVFPVRFFGSVMVNPN-GTRK--WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESA 272 (802)
Q Consensus 196 ~~r~~~~~~V~f~g~~~~~~~-g~~~--~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~~y~~a 272 (802)
++|++.+|+|+|+|+|+...+ |+.+ |++++.|+|||||+|||||++++||+||||+|+ +...|++..||.|+|.+|
T Consensus 161 ~~r~~~~~~V~f~G~v~~~~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LRLW~a~-~~~~f~l~~fn~gdy~~a 239 (794)
T TIGR02093 161 IRRPDRSYEVRFGGRVELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAE-APEEFDLDAFNAGDYYEA 239 (794)
T ss_pred eecCCcEEEEEeCCEEeeeccCCcceeEeeCceEEEEeecceeecCCCCCceEEEEEEEec-CccccCHhhccCccHhhh
Confidence 999999999999999975443 6444 999999999999999999999999999999999 677899999999999999
Q ss_pred HhhhhhhccccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHH
Q 003693 273 AQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMR 352 (802)
Q Consensus 273 ~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iHlNDtHpalaipElmR 352 (802)
+++++.+|+||++|||+|++++||+||||||||||+||+|||||+|++.+ .+++.|+++++||||||||||+||||||
T Consensus 240 ~~~~~~~e~It~vLYp~D~~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~--~~l~~l~~~~~ihlNDtHpalai~ElmR 317 (794)
T TIGR02093 240 VEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETH--PDLSDFPKKVAIQLNDTHPALAIPELMR 317 (794)
T ss_pred hhChhhcCccccCCcCCCCccchHHHHHHHHHHhhhhHHHHHHHHHHHhC--CChhhCCcceEEEecCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 4799999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccc
Q 003693 353 LLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCIL 432 (802)
Q Consensus 353 ~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii 432 (802)
+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||++|+..++..+|.|++++.+||||
T Consensus 318 ~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~d~~~~~~~sii 397 (794)
T TIGR02093 318 LLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSII 397 (794)
T ss_pred HHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCCcHHHHhheeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-ccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHhcCc
Q 003693 433 DNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKT 511 (802)
Q Consensus 433 ~~~~~~~-~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~ 511 (802)
++ +++ +||||+|||++||+|||||+||++++|+.+|++|+.+||+||+|||||||+|||+.+|||+|++||++++|
T Consensus 398 ~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig- 474 (794)
T TIGR02093 398 EE--GQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIG- 474 (794)
T ss_pred ec--CCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccCCcCCCCCccchhhhcCHHHHHHHHHhcC-
Confidence 97 434 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHH
Q 003693 512 DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYK 591 (802)
Q Consensus 512 ~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~ 591 (802)
++|.+|++.|++|+++++|++|+++|+++|++||++|++||++++|+.+||+++||||||||||||||+||+|++++||.
T Consensus 475 ~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~ 554 (794)
T TIGR02093 475 DDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYN 554 (794)
T ss_pred chhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhccccccccc
Q 003693 592 KLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQH 671 (802)
Q Consensus 592 ~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~ 671 (802)
+|++ ||+. +++|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||||++|++|+||||||||
T Consensus 555 ~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseq 631 (794)
T TIGR02093 555 RIKE-DPPK--DIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQ 631 (794)
T ss_pred HHHh-CCCc--CCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhh
Confidence 9998 7764 678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccccchHHHHhhhccCCC---CCCChHHHHHHHH
Q 003693 672 ISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQF 748 (802)
Q Consensus 672 iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~~ev~~~~~~~~~~~---~~~~~~l~~v~~~ 748 (802)
|||||+||||||||||||||||||||+|||||||.++||++|+|+||++++||.+++..+ |+| |+.+|.+++++|+
T Consensus 632 istag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~-Y~~~~~y~~~~~l~~~~d~ 710 (794)
T TIGR02093 632 ISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKG-YNPREYYEADPELKRVLDL 710 (794)
T ss_pred CCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHHHHHHHcC-CCchhcccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998766 888 4889999999999
Q ss_pred HHcCCCCCCC---hHHHHHHHhhCCCCCCCCcccccCCcHHHHHHHHHHHHHhccC
Q 003693 749 IRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKRS 801 (802)
Q Consensus 749 m~~g~fs~~~---f~~ly~~l~~~~~~~~~D~y~~~~Df~~y~~~~~~~~~~y~d~ 801 (802)
|.+|+||+.+ |++||++|+.+ +|+||||+||+||++||++|+++|+|+
T Consensus 711 i~~g~f~~~~~~~f~~l~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~ 761 (794)
T TIGR02093 711 ISSGTFSPGDPGLFRPLYDSLLNH-----GDPFFVLADFAAYVDAQERVDALYRDQ 761 (794)
T ss_pred HhcCCCCCCCchHHHHHHHHHccC-----CCeeeeeccHHHHHHHHHHHHHHhcCH
Confidence 9999999875 99999999987 899999999999999999999999986
No 3
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=100.00 E-value=4.1e-236 Score=2034.14 Aligned_cols=754 Identities=54% Similarity=0.889 Sum_probs=732.4
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEehhccccchhHHhhccChHHH
Q 003693 33 ASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNA 112 (802)
Q Consensus 33 ~~~i~~~l~~~~gk~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~NLg~~~~ 112 (802)
+++|.+||++++|+++++||+.++|+|||.+|||+++++|.+|++.+.+.+.|+||||||||||||+|.|||+|||++++
T Consensus 1 ~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~L~nnl~nLgl~~~ 80 (797)
T cd04300 1 KKAIVDHLEYTLGKDPEEATDRDLYQALAYAVRDRLVERWNRTQQYYYDKDAKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80 (797)
T ss_pred ChHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEchhhhcchHHHHHHHhCCcHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCC
Q 003693 113 YADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFS 192 (802)
Q Consensus 113 ~~eaL~~~g~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~ 192 (802)
+++||++||+++++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|++|||+|.||+|+..++
T Consensus 81 ~~~~L~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F~Q~i~~G~Q~E~pd~Wl~~~~ 160 (797)
T cd04300 81 VREALAELGVDLEDLEEQEPDAGLGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLFKQKIVDGYQVELPDNWLRYGN 160 (797)
T ss_pred HHHHHHHhCCCHHHHHhcCCCCCCCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEecCCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCeeEEEEeCCeEEEcCC-Ccee--eeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcchh
Q 003693 193 PWEVVRHDVVFPVRFFGSVMVNPN-GTRK--WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQY 269 (802)
Q Consensus 193 pwe~~r~~~~~~V~f~g~~~~~~~-g~~~--~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~~y 269 (802)
|||++|++.+|+|+|+|+++...+ |+.+ |++++.|+|||||+|||||++++||+||||+++ +...||++.||.++|
T Consensus 161 pwe~~r~~~~~~V~f~G~~~~~~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~-~~~~~dl~~fn~gdy 239 (797)
T cd04300 161 PWEIRRPDVAVPVRFGGRVEHYEDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAE-ASEEFDLDAFNRGDY 239 (797)
T ss_pred CceEecCCcEEEEEECCEEEEeecCCcceeeecCcceEEeeecceeecCCCCCceEEEEEEEee-CCCCcCHHHhcCCch
Confidence 999999999999999999985443 6544 999999999999999999999999999999999 667899999999999
Q ss_pred hhHHhhhhhhccccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHH
Q 003693 270 ESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPE 349 (802)
Q Consensus 270 ~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iHlNDtHpalaipE 349 (802)
.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.++ +++.|+++++||||||||||+|||
T Consensus 240 ~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~~--~~~~l~~~~~ihlNDtHpalai~E 317 (797)
T cd04300 240 IRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKTHG--PLSEFPDKVAIQLNDTHPALAIPE 317 (797)
T ss_pred hhHHhhHHHhhhhhcccCCCCCchhHHHHHHHHHHHHhhhHHHHHHHHHHHhCC--ChhhCCCceEEEecCCcHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999984 789999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcchhccc
Q 003693 350 LMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSM 429 (802)
Q Consensus 350 lmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~ 429 (802)
|||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||++|++.+++++|.|++++.+|
T Consensus 318 lmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~In~~~~~~~~~~~~~~~~~~~~l 397 (797)
T cd04300 318 LMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKYPGDEDRIRRM 397 (797)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCC-ccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHh
Q 003693 430 CILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKW 508 (802)
Q Consensus 430 ~ii~~~~~~~-~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~ 508 (802)
+||++ +.+ +||||+|||++||+|||||+||++++|+++|++|+.+||+||+|||||||+|||+.+|||+|++||+++
T Consensus 398 ~ii~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ 475 (797)
T cd04300 398 SIIEE--GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITET 475 (797)
T ss_pred ccccc--CCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHh
Confidence 99987 333 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHH
Q 003693 509 LKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIY 588 (802)
Q Consensus 509 ~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~ 588 (802)
+| ++|.+|+++|++|+++++|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+||+|++++
T Consensus 476 ig-~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~ 554 (797)
T cd04300 476 IG-DDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIH 554 (797)
T ss_pred cC-chhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHH
Confidence 99 59999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccc
Q 003693 589 RYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSEL 668 (802)
Q Consensus 589 ~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv 668 (802)
||.+|++ ||+. +++|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||||++||+|+|||||
T Consensus 555 ~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDv 631 (797)
T cd04300 555 LYNRIKE-NPNA--DIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADL 631 (797)
T ss_pred HHHHHHh-CCCc--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhh
Confidence 9999998 7764 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccccchHHHHhhhccCCC---CCCChHHHHH
Q 003693 669 SQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEA 745 (802)
Q Consensus 669 ~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~~ev~~~~~~~~~~~---~~~~~~l~~v 745 (802)
||||||||+||||||||||||||||||||+|||||||.++||++|+|+||++++||.+++..+ |++ |+.+|.++++
T Consensus 632 seqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~-y~~~~~y~~~~~l~~v 710 (797)
T cd04300 632 SEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANG-YYPADYYEADPELRRV 710 (797)
T ss_pred hhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CChHhhccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998766 776 5889999999
Q ss_pred HHHHHcCCCCCCC---hHHHHHHHhhCCCCCCCCcccccCCcHHHHHHHHHHHHHhccC
Q 003693 746 KQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKRS 801 (802)
Q Consensus 746 ~~~m~~g~fs~~~---f~~ly~~l~~~~~~~~~D~y~~~~Df~~y~~~~~~~~~~y~d~ 801 (802)
+|+|.+|+|++++ |.+||++|+.+ +|+||||+||+||++||++|+++|+|+
T Consensus 711 ~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~ 764 (797)
T cd04300 711 LDQIASGFFSPGDPGEFRPLVDSLLNG-----NDEYLVLADFESYVDAQEKVDALYRDQ 764 (797)
T ss_pred HHHHhcCCCCCCCcHHHHHHHHHHccC-----CCeeEeeccHHHHHHHHHHHHHHccCH
Confidence 9999999998664 99999999987 899999999999999999999999986
No 4
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=5.6e-236 Score=2022.81 Aligned_cols=753 Identities=44% Similarity=0.744 Sum_probs=732.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEehhccccchhHHhhc
Q 003693 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (802)
Q Consensus 27 ~~~~~~~~~i~~~l~~~~gk~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~N 106 (802)
.++++|+++|.+||++++|+++++||+.++|+|||.+|||+|+++ ++.+.+.+.|+||||||||||||+|.|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~----~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~n 80 (798)
T PRK14985 5 FNKKQFQAALTRQWQRFGLNSAAEMTPRQWWQAVSAALAELLRAQ----PAAKPVANQRHVNYISMEFLIGRLTGNNLLN 80 (798)
T ss_pred CCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHH----HHHHhhcCCcEEEEechhhhccHHHHHHHHh
Confidence 467899999999999999999999999999999999999999998 5667778899999999999999999999999
Q ss_pred cChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeecccc
Q 003693 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (802)
Q Consensus 107 Lg~~~~~~eaL~~~g~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~ 186 (802)
||++++++|||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+||+|+|.||.
T Consensus 81 lgl~~~~~~al~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~ 160 (798)
T PRK14985 81 LGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (798)
T ss_pred cCCHHHHHHHHHHcCCCHHHHhccCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCc
Q 003693 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (802)
Q Consensus 187 Wl~~g~pwe~~r~~~~~~V~f~g~~~~~~~g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~ 266 (802)
|+..++|||++|++..++|+|+|+++.. +|+.+|++++.|.|||||+|||||+|+++|+||||+++ +..+|++..||.
T Consensus 161 Wl~~~~pwe~~r~~~~~~V~f~G~v~~~-~G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~-~~~~~~l~~fn~ 238 (798)
T PRK14985 161 WHRDSYPWFRHNEALDVQVGIGGKVTKQ-DGRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQAT-HAHPFDLTKFND 238 (798)
T ss_pred cccCCCCceecCCCceEEEeeCCEEEee-CCcEEEECCEEEEEEeccccccCCCCCceEEEEEeEcC-CCCccCHHHcCC
Confidence 9999999999999999999999999754 78778999999999999999999999999999999999 455899999999
Q ss_pred chhhhHHhhhhhhccccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCccccc
Q 003693 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (802)
Q Consensus 267 ~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iHlNDtHpala 346 (802)
|+|.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.+ ++|+.||++++||||||||||+
T Consensus 239 gdy~~a~en~~~~e~It~~LYp~D~~~~Gk~lRLkQEyfl~sa~vqdilr~~~~~~--~~l~~l~~~~~ihlNDtHpala 316 (798)
T PRK14985 239 GDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAG--RKLHELPDYEVIQLNDTHPTIA 316 (798)
T ss_pred cchhhccccchhhcchhceecCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChhhCCCCcEEEecCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999876 6799999999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcchh
Q 003693 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (802)
Q Consensus 347 ipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~ 426 (802)
||||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||++|+..++..+|.|.+++
T Consensus 317 i~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~d~~~~ 396 (798)
T PRK14985 317 IPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTRFKTLVEKTWPGDKKVW 396 (798)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCcHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHH
Q 003693 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (802)
Q Consensus 427 ~~~~ii~~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~ 506 (802)
.+||||++ ++||||+|||++||+|||||+||++++++.+|++|+.+||+||+|||||||+|||+.+|||+|++||+
T Consensus 397 ~~~sii~~----~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~p~kf~nvTNGVt~rrWl~~~np~L~~Li~ 472 (798)
T PRK14985 397 AKLAVVHD----KQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLD 472 (798)
T ss_pred hhhhhccC----CeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhCCCccCCcCCCcCcchhhhhhCHHHHHHHH
Confidence 99999987 48999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCccccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhH
Q 003693 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (802)
Q Consensus 507 ~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~i 586 (802)
+++| ++|.+|++.|++|+++.+|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+||+|++
T Consensus 473 ~~ig-~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~i 551 (798)
T PRK14985 473 KTLK-KEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHI 551 (798)
T ss_pred HhcC-cchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhh
Confidence 9999 599999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccc
Q 003693 587 IYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS 666 (802)
Q Consensus 587 i~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipga 666 (802)
++||.+|++ ||.. +++|+||||||||||+|.+||+|||+|+++|++||+||+|+++|||||+|||||++|++|+|||
T Consensus 552 i~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaa 628 (798)
T PRK14985 552 LALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAA 628 (798)
T ss_pred HHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhh
Confidence 999999998 7764 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccccchHHHHhhhccCCC---CCCChHHH
Q 003693 667 ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFE 743 (802)
Q Consensus 667 Dv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~~ev~~~~~~~~~~~---~~~~~~l~ 743 (802)
||||||||||+||||||||||||||||||||+|||||||.++||++|+|+||++++||.+++..+ |+| |+.+|.++
T Consensus 629 Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev~~~~~~~-y~~~~~y~~~~~l~ 707 (798)
T PRK14985 629 DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKALLAKG-YDPVKWRKKDKVLD 707 (798)
T ss_pred hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CChhhhccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998666 988 48899999
Q ss_pred HHHHHHHcCCCCCCC---hHHHHHHHhhCCCCCCCCcccccCCcHHHHHHHHHHHHHhccC
Q 003693 744 EAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKRS 801 (802)
Q Consensus 744 ~v~~~m~~g~fs~~~---f~~ly~~l~~~~~~~~~D~y~~~~Df~~y~~~~~~~~~~y~d~ 801 (802)
+|+|+|.+|+||+.+ |++||++|+.+ +|+||||+||+||++||++|+++|+|+
T Consensus 708 ~v~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~y~d~ 763 (798)
T PRK14985 708 AVLKELESGKYSDGDKHAFDQMLHSLKQG-----GDPYLVLADFAAYVEAQKQVDALYRDQ 763 (798)
T ss_pred HHHHHHhcCCCCCCCchhHHHHHHHHhhC-----CCeeEeeccHHHHHHHHHHHHHHhcCH
Confidence 999999999999875 99999999987 899999999999999999999999986
No 5
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=4.4e-234 Score=2013.76 Aligned_cols=762 Identities=44% Similarity=0.775 Sum_probs=740.3
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEehhccccchhH
Q 003693 23 NPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTN 102 (802)
Q Consensus 23 ~~~~~~~~~~~~~i~~~l~~~~gk~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~n 102 (802)
....+++++|+++|.+||++++|+++++||+.++|+|||.+|||+++++|.+|++.+.+.+.|+||||||||||||+|.|
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l~n 87 (815)
T PRK14986 8 ASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSN 87 (815)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcEEEEEchhhhccHHHHH
Confidence 34457889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceee
Q 003693 103 AIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEE 182 (802)
Q Consensus 103 nl~NLg~~~~~~eaL~~~g~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E 182 (802)
||+|||+++++++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|
T Consensus 88 nl~nlg~~~~~~~al~~lg~~l~~l~~~E~Da~LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F~Q~I~dG~Q~E 167 (815)
T PRK14986 88 ALLSLGIYDDVQGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKE 167 (815)
T ss_pred HHHhcCcHHHHHHHHHHcCCCHHHHHhcCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCcccccCCeeEEEEeCCeEEEcCCCc-eeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccc
Q 003693 183 VAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGT-RKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNL 261 (802)
Q Consensus 183 ~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~~~~~~g~-~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l 261 (802)
.||+|+..|+|||++|++.+++|+|+|+++.. |. .+|++++.|+|||||+|||||+|++||+||||+++ +..+||+
T Consensus 168 ~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~~--g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW~a~-~~~~fd~ 244 (815)
T PRK14986 168 SPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQE--GKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQ-ASSEINL 244 (815)
T ss_pred cCCCccCCCCceeEecCCcEEEEEeCCEEEec--CceeEeeCCeeEEEEeCCccccCCCCCceEEEEEEEee-cCcccCH
Confidence 99999999999999999999999999999753 53 33999999999999999999999999999999999 6778999
Q ss_pred cccCcchhhhHHhhhhhhccccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCC
Q 003693 262 FQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDT 341 (802)
Q Consensus 262 ~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iHlNDt 341 (802)
..||.|+|..|+.+++.+|+||++|||+|++++||+||||||||||+||+|||||+|++.+ ++|+.|+++++||||||
T Consensus 245 ~~fn~g~y~~a~~~~n~~e~Is~~LYp~D~~y~Gk~lRLkQEyfl~~agv~di~r~~~~~~--~~l~~l~~~v~ihlNDt 322 (815)
T PRK14986 245 GKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLH--KTYDNLADKIAIHLNDT 322 (815)
T ss_pred hhcccccHHHHhhccchhhccccccCCCCCCcccHHHHHHHHHHhhhHHHHHHHHHHHHhC--CCHhhCCcccEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999988 57999999999999999
Q ss_pred cccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCC
Q 003693 342 HPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSD 421 (802)
Q Consensus 342 HpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~~in~~~~~~~~~~~~~ 421 (802)
||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|+..+++++|.
T Consensus 323 Hpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl~~~~~~~~~ 402 (815)
T PRK14986 323 HPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPN 402 (815)
T ss_pred cHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhcccccccCCCCCC-ccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChh
Q 003693 422 LESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPE 500 (802)
Q Consensus 422 ~~~~~~~~~ii~~~~~~~-~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~ 500 (802)
|++++.+||||++ +++ +||||+||+++||+|||||+||++++++.+|++|+.+||+||.+||||||+|||+.+|||+
T Consensus 403 ~~~~~~~~sii~~--~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~P~kf~niTNGV~~rrWl~~~np~ 480 (815)
T PRK14986 403 DTDLLGRASIIDE--SNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPS 480 (815)
T ss_pred cHHHHhhhhcccc--CCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhCCCcccccCCCCChhhHhhhcCHH
Confidence 9999999999987 334 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCccccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhh
Q 003693 501 LSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQL 580 (802)
Q Consensus 501 l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~ 580 (802)
|++||++++| ++|.+|+++|++|+++.+|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+
T Consensus 481 L~~Li~~~ig-~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qakR~heYKRq~ 559 (815)
T PRK14986 481 LSAVLDEHIG-RTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQL 559 (815)
T ss_pred HHHHHHHhcC-chhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeehhhhhhhhhh
Confidence 9999999999 599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHh
Q 003693 581 LNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAE 660 (802)
Q Consensus 581 Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~ 660 (802)
||+|++++||.+|++ ||+. +++|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||+|++|+
T Consensus 560 LNil~~i~ry~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY~vslAe 636 (815)
T PRK14986 560 MNVLHVITRYNRIKA-DPDA--KWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQ 636 (815)
T ss_pred HHHhhhHHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCCCHHHHH
Confidence 999999999999998 7764 5789999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccccchHHHHhhhccCCC---CC
Q 003693 661 LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FK 737 (802)
Q Consensus 661 ~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~~ev~~~~~~~~~~~---~~ 737 (802)
+|+|||||||||||||+||||||||||||||+|||||+|||||||.++||++|+|+||++++||.+++.++ |+| |+
T Consensus 637 ~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~~~~~~~-Y~~~~~y~ 715 (815)
T PRK14986 637 LIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEALRRQG-YKPREYYE 715 (815)
T ss_pred HhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHHHHHHcC-CChhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998766 988 48
Q ss_pred CChHHHHHHHHHHcCCCCCCC---hHHHHHHHhhCCCCCCCCcccccCCcHHHHHHHHHHHHHhccC
Q 003693 738 PDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKRS 801 (802)
Q Consensus 738 ~~~~l~~v~~~m~~g~fs~~~---f~~ly~~l~~~~~~~~~D~y~~~~Df~~y~~~~~~~~~~y~d~ 801 (802)
.+|.+++++|+|.+|+||+.+ |.+||++|+.+ +|+||||+||+||++||++|+++|+|+
T Consensus 716 ~~~~l~~~~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~aq~~v~~~y~d~ 777 (815)
T PRK14986 716 KDEELHQVLTQIGSGVFSPEEPGRYRDLVDSLINF-----GDHYQVLADYRSYVDCQDKVDELYRNQ 777 (815)
T ss_pred CCHHHHHHHHHHhcCCCCCCCchhHHHHHHHhccC-----CCeeEeeccHHHHHHHHHHHHHHhcCH
Confidence 899999999999999999875 99999999987 899999999999999999999999986
No 6
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=100.00 E-value=4.6e-214 Score=1826.16 Aligned_cols=670 Identities=52% Similarity=0.881 Sum_probs=605.1
Q ss_pred HHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcc
Q 003693 116 ALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWE 195 (802)
Q Consensus 116 aL~~~g~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe 195 (802)
||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||+|+|+|+||+|+|.||+||..|||||
T Consensus 1 Al~~lg~~~~~l~~~E~da~LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe 80 (713)
T PF00343_consen 1 ALKELGFDLEELEEQEPDAGLGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWE 80 (713)
T ss_dssp HHHHTT--HHHHHTTS--EEESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTS
T ss_pred ChhHhCCCHHHHHhhCcCccccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeEEEEeCCeEEEcCCCcee-eeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcchhhhHHh
Q 003693 196 VVRHDVVFPVRFFGSVMVNPNGTRK-WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQ 274 (802)
Q Consensus 196 ~~r~~~~~~V~f~g~~~~~~~g~~~-~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~~y~~a~~ 274 (802)
++|++.+|+|+|+|+|+ ..+|+.. |+++++|+|||||+|||||++++||+||||+|+ ++++||+..|+.|+|.+|++
T Consensus 81 ~~r~~~~~~V~f~G~v~-~~~~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~-~~~~fd~~~fn~gdy~~a~~ 158 (713)
T PF00343_consen 81 IRRPDESYEVKFGGRVE-DDGGRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAE-PSEEFDLESFNRGDYIKAVE 158 (713)
T ss_dssp EEEGGGEEEEEESEEEE--EETTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEE-ESSSTTHHHHHTTCHHHHHH
T ss_pred EecCCceEEEeccceEE-ecCCCcccccCCeEEEEEecCceeecCCCCceEEEEEeccC-CCcccChhhcCCCcHHHHHH
Confidence 99999999999999998 3345544 999999999999999999999999999999999 88899999999999999999
Q ss_pred hhhhhccccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHHHH
Q 003693 275 LHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLL 354 (802)
Q Consensus 275 ~~~~~~~It~~LYp~D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iHlNDtHpalaipElmR~l 354 (802)
+++.+|+||++|||+|++++||+|||||||||||||||||||+|++.+ .++++||++++||||||||||+|||+||+|
T Consensus 159 ~~~~~e~is~vLYP~d~~~~Gk~LRLkQqyf~vsa~lqdiir~~~~~~--~~~~~~~~~~~ihlNdtHpa~ai~ElmR~L 236 (713)
T PF00343_consen 159 EKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKSH--GDLREFPDKVVIHLNDTHPAFAIPELMRIL 236 (713)
T ss_dssp HHHHHHGGGTBSS-SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTTHHHHHHHHH
T ss_pred HHHHhhceeeecCCCCccccchhhhhhhHhhhhhhHHHHHHHHHHHhC--CChHHCCcceEEeecCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 589999999999999999999999999999
Q ss_pred HHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccC
Q 003693 355 MDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDN 434 (802)
Q Consensus 355 ~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~ 434 (802)
||++|++|++||+||+++|+||||||||||+|+||++||+++||||+|||++||++|+..+..++|.|.+.+.+|+++++
T Consensus 237 ~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~d~~~~~~l~ii~~ 316 (713)
T PF00343_consen 237 MDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPGDEDQIRRLSIIEE 316 (713)
T ss_dssp HHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHSSEET
T ss_pred HHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcCcchhhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCC-ccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHhcCccc
Q 003693 435 NPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQ 513 (802)
Q Consensus 435 ~~~~~-~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~ 513 (802)
+.+ .||||+|||++||+|||||+||++++|+++|++|+.+||+||+|||||||+|||+.+|||+|++||++++| ++
T Consensus 317 --~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG-~~ 393 (713)
T PF00343_consen 317 --GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIG-DD 393 (713)
T ss_dssp --SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHT-SG
T ss_pred --cchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhc-cc
Confidence 333 99999999999999999999999999999999999999999999999999999999999999999999999 59
Q ss_pred cccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHH
Q 003693 514 WVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKL 593 (802)
Q Consensus 514 w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i 593 (802)
|.+|++.|++|.++++|+.|+++|+++|++||.+|+++|+++.|+.+||+++||+|||||||||||+||+|+++++|.+|
T Consensus 394 W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~ri 473 (713)
T PF00343_consen 394 WRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRI 473 (713)
T ss_dssp GGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCC
Q 003693 594 KEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIS 673 (802)
Q Consensus 594 ~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS 673 (802)
++ +|+. ..+|+||||||||||+|.+||+|||+|+++|++||+||+++++|||||+|||||++|++|+||||||||||
T Consensus 474 k~-~p~~--~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p 550 (713)
T PF00343_consen 474 KN-NPNK--KIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIP 550 (713)
T ss_dssp HH-STTS--CCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE--
T ss_pred Hh-cccC--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCC
Confidence 99 7763 57899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccccchHHHHhhhccCCC---CCCChHHHHHHHHHH
Q 003693 674 TAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIR 750 (802)
Q Consensus 674 ~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~~ev~~~~~~~~~~~---~~~~~~l~~v~~~m~ 750 (802)
|||+||||||||||||||+|||||+|||||||.+++|++|+|+||++++||.+++.++ |++ |+.++.+++++|+|.
T Consensus 551 ~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev~~~~~~g-Y~~~~~y~~~~~l~~vld~i~ 629 (713)
T PF00343_consen 551 TRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEVEELRKNG-YNPREYYENDPELKRVLDQII 629 (713)
T ss_dssp -TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHHHHHHHHT--HHHHHHHHSHHHHHHHHHHH
T ss_pred CCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHHHHHHhcC-CCcccccccCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999998665 877 377999999999999
Q ss_pred cCCCCCC---ChHHHHHHHhhCCCCCCCCcccccCCcHHHHHHHHHHHHHhccC
Q 003693 751 SGAFGSY---DYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKRS 801 (802)
Q Consensus 751 ~g~fs~~---~f~~ly~~l~~~~~~~~~D~y~~~~Df~~y~~~~~~~~~~y~d~ 801 (802)
+|+|++. .|.+||++++.+ +|+|||++||+||++||++|+++|+|+
T Consensus 630 ~g~f~~~~~~~f~~i~~~~~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~ 678 (713)
T PF00343_consen 630 SGFFSPGDPDEFKPIYDSLLMY-----NDEYLVLADFESYVEAQEKVDKAYRDP 678 (713)
T ss_dssp HTTTTTTSTTTTHHHHHHCHHH-----TTTT-HHHHHHHHHHHHHHHHHHHCSH
T ss_pred cCCCCCCCchhHHHHHhCcCCC-----CCcchhhhhHHHHHHHHHHHHHHhcCH
Confidence 9999983 499999997766 899999999999999999999999985
No 7
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-189 Score=1623.67 Aligned_cols=702 Identities=46% Similarity=0.741 Sum_probs=662.5
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEehhccccchhHHhhcc
Q 003693 28 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSL 107 (802)
Q Consensus 28 ~~~~~~~~i~~~l~~~~gk~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~NL 107 (802)
+.++|+..|..++.+..|+++..||+++||.|++..||+++...|.+|++.+.+.+.|+|||+|||||+||++.|||+||
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~yy~s~efL~grl~~~~l~n~ 84 (750)
T COG0058 5 RLEQLAYNLWWSLDTTAGKLFRDADPEDWYEALHNPVRELLAADWLRLNQLARDEDFKQVYYLSMEFLIGRLLGNNLWNL 84 (750)
T ss_pred cHHHHHHHHHHHHHHHhccChhhCCHHHHHHHhhHHHHHHHhcCHHHHHHhhcchhHHHHHHHHHHHHHHHhhhcchhhh
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccc
Q 003693 108 DIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDW 187 (802)
Q Consensus 108 g~~~~~~eaL~~~g~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~W 187 (802)
|+++.++++|+++|++++|+.+.|+||+|| ||||||||||||||||||+|++||||||+||||+|++.||||+|.||.|
T Consensus 85 g~~~~~~~~l~~~~~~~~e~~~~e~~p~lg-GGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w 163 (750)
T COG0058 85 GIYDDVQEALKELGYFLMEFGEHESDPGLG-GGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEW 163 (750)
T ss_pred cchHHHHhhHHhhhccHHHHhhcccCcccc-ccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhh
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcc
Q 003693 188 LEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG 267 (802)
Q Consensus 188 l~~g~pwe~~r~~~~~~V~f~g~~~~~~~g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~ 267 (802)
+..|+|||+.|+ . + |+|||+||+||++ ++|+||||+++++..+|.|..+|.|
T Consensus 164 ~~~~~pwe~~r~---------------~---------~---a~~~d~~V~g~~~-~~~~lrlW~a~~~~~~~~l~~~n~~ 215 (750)
T COG0058 164 LKYGNPWEFLRD---------------A---------E---GVPYDVPVPGYDN-RVVTLRLWQAQVGRVPLYLLDFNVG 215 (750)
T ss_pred hccCCcceeecc---------------c---------C---CceeeeeEEeccC-cEEEEEEEEEecCccceEeecCCCc
Confidence 999999999764 0 1 5899999999999 9999999999976557777777777
Q ss_pred hhhhHHhhhhhhccccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccH
Q 003693 268 QYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAI 347 (802)
Q Consensus 268 ~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iHlNDtHpalai 347 (802)
+++..+|+||++|||+|| ++|||+||||||+||+|+|++++...++ +++.+ +.|||||||||++
T Consensus 216 ------e~~~~~~~iT~~LYp~Ds----~elRl~Qeyfl~~agvq~I~~~~~~~~~--~~~~~----~~~lNdtHpa~~i 279 (750)
T COG0058 216 ------ENKNDARNITRVLYPGDS----KELRLKQEYFLGSAGVQDILARGHLEHH--DLDVL----ADHLNDTHPALAI 279 (750)
T ss_pred ------ccchhhhhHHhhcCCCCc----HHHHHhhhheeeeHHHHHHHHHhhhccc--cccch----hhhhcCCChhHhH
Confidence 578899999999999998 8999999999999999999999544442 45544 5679999999999
Q ss_pred HHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcchhc
Q 003693 348 PELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIP 427 (802)
Q Consensus 348 pElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~ 427 (802)
||+||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||.+|+.+++..++.| .+.
T Consensus 280 ~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~l~~~~~~~~~~--~~~ 357 (750)
T COG0058 280 PELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARFLPEVRLLYLGD--LIR 357 (750)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhhhHHHHhhcccc--ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988 777
Q ss_pred ccccccCCCCCCccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHH
Q 003693 428 SMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITK 507 (802)
Q Consensus 428 ~~~ii~~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~ 507 (802)
++++|++ ||||+||+++||+|||||+||++++|++.|++|++++|+||+|||||||+|||+..|||+|++++++
T Consensus 358 ~~~~i~~------v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p~~i~nvTNGIt~rrWl~~~n~~L~~~~~~ 431 (750)
T COG0058 358 RGSPIEE------VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYPEKINNVTNGITPRRWLAPANPGLADLLDE 431 (750)
T ss_pred cCCcccc------eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCccccccccCCcCCchhhhhhhHHHHHHHhh
Confidence 8888864 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCccccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHH
Q 003693 508 WLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAI 587 (802)
Q Consensus 508 ~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii 587 (802)
.+| +.|..+++.++++..+++|+.|++.|+.+|.+||++|+++++++.|+.+||++|||||||||||||||+||+++++
T Consensus 432 ~ig-~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~ 510 (750)
T COG0058 432 KIG-DEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQLLNLLDIE 510 (750)
T ss_pred hhh-hhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhhHHhHhhHH
Confidence 999 5999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhccccc
Q 003693 588 YRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSE 667 (802)
Q Consensus 588 ~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaD 667 (802)
.+|..|++ |. .+|+|+||||||||+|+.||+|||+|+++|+++|+ ++||||+|||||++|++||||||
T Consensus 511 ~ly~~i~~-d~-----~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~------~lkVvFl~nYdvslA~~iipa~D 578 (750)
T COG0058 511 RLYRILKE-DW-----VPRVQIIFAGKAHPADYAAKEIIKLINDVADVINN------KLKVVFLPNYDVSLAELLIPAAD 578 (750)
T ss_pred HHHHHHhc-CC-----CCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcc------cceEEEeCCCChhHHHhhccccc
Confidence 99999984 22 23566699999999999999999999999999976 78999999999999999999999
Q ss_pred ccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccccchHHHHhhhccCCC---C-CCChHHH
Q 003693 668 LSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---F-KPDPRFE 743 (802)
Q Consensus 668 v~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~~ev~~~~~~~~~~~---~-~~~~~l~ 743 (802)
|||||||||+||||||||||||||+|||||+|||||||.+.+|++|+|+||++++++...+.++ +.+ | ..++.++
T Consensus 579 vweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~-~~~~~~y~~~~~~v~ 657 (750)
T COG0058 579 VWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADG-YDPNALYYELENEVK 657 (750)
T ss_pred ccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcc-cccHHHHHHHhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988666 444 3 6688999
Q ss_pred HHHHHHHcCCCCCCC---hHHHHHHHhh-CCCCCCC-CcccccCCcHHHHHHHHHHHHHhccC
Q 003693 744 EAKQFIRSGAFGSYD---YNPLLDSLEG-NTGYGRG-DYFLVGYDFPSYLEAQDRVDQAYKRS 801 (802)
Q Consensus 744 ~v~~~m~~g~fs~~~---f~~ly~~l~~-~~~~~~~-D~y~~~~Df~~y~~~~~~~~~~y~d~ 801 (802)
.+.+.+.+|.|+++. |+++|+++.. + + |+||+++||++|++||+++++.|+++
T Consensus 658 ~~~~~~~~~~~~p~~~~~~~~~~~sl~~~~-----~~dr~~~~yd~~~Y~~aq~~~~~~~~~~ 715 (750)
T COG0058 658 PVLDEIIDGRFSPGWKSRFKNLIDSLLPKF-----GTDRMMVLYDFKAYVPAQEEVDALYRDQ 715 (750)
T ss_pred HHHHHHhcccCCcccHHHHHHHHHHhhhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999753 9999999986 4 5 99999999999999999999999875
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=5e-132 Score=1168.81 Aligned_cols=557 Identities=25% Similarity=0.403 Sum_probs=488.5
Q ss_pred CceEEEEEehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEe
Q 003693 84 PKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYG 163 (802)
Q Consensus 84 ~k~vyYlSmEfl~Gr~L~nnl~NLg~~~~~~eaL~~~g~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~G 163 (802)
.+.++||||||.+..+|+ +||||||||||||||||||||+|++|||
T Consensus 85 ~~~~aYFs~E~gl~~~lp----------------------------------iYsGGLG~LAgd~lksasdLg~P~vgvG 130 (778)
T cd04299 85 PLVAAYFSMEFGLHESLP----------------------------------IYSGGLGILAGDHLKAASDLGLPLVGVG 130 (778)
T ss_pred CCeeEEeccccccCCCCC----------------------------------ccCchHHHHHHHHHHHHHhCCCCEEEEE
Confidence 355669999999999998 9999999999999999999999999999
Q ss_pred eccCCccceEEee-CCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCC
Q 003693 164 LRYRYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTK 242 (802)
Q Consensus 164 irY~~G~F~Q~i~-dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~~~~~~g~~~~~~~~~v~av~yd~pi~gy~~~ 242 (802)
|+|+||||+|+|+ ||||+|.|+.|...+.||+..+ +.+|+ +.++ .+|++|+
T Consensus 131 llY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~~---------------~~~G~------~~~v----~v~l~g~--- 182 (778)
T cd04299 131 LLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPVR---------------DADGE------PVRV----SVELPGR--- 182 (778)
T ss_pred eCcCCCCeEEEECCCCceeecCCCcCCCCCceEEEe---------------cCCCC------eEEE----EEeeCCC---
Confidence 9999999999999 9999999999999999998621 24564 2333 4778997
Q ss_pred ceEEEEEEEeecCCCCccccccCcchhhhHHhhhhhhccccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcc
Q 003693 243 NTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK 322 (802)
Q Consensus 243 ~~n~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~ 322 (802)
.+++|+|+++++ ++++|++|++.+. |...+|.||++|||+| +++|||||+|||+||++.+ |++ +
T Consensus 183 -~v~~rvw~~~vg--~v~lylLDtd~~~----n~~~~R~iT~~LYg~D-----~~~Rl~Qe~~Lg~agl~~L-r~l---g 246 (778)
T cd04299 183 -TVYARVWKAQVG--RVPLYLLDTDIPE----NSPDDRGITDRLYGGD-----QETRIQQEILLGIGGVRAL-RAL---G 246 (778)
T ss_pred -ceEEEEEEEEcC--CCCEEEecCCccc----cchhhcccccCCCCCc-----HHHHHHHHHHHHHHHHHHH-HHh---C
Confidence 679999999975 6999999999874 5778999999999988 5789999999999999874 332 1
Q ss_pred cCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHH
Q 003693 323 SGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHME 402 (802)
Q Consensus 323 g~~~l~~l~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ 402 (802)
.+|++||||||||||+++|+||++++++|++|++||++|+.+||||||||+|||+|+||.+++++++|+|++
T Consensus 247 --------~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~ 318 (778)
T cd04299 247 --------IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYAR 318 (778)
T ss_pred --------CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHH
Confidence 368999999999999999999999998899999999999999999999999999999999999999997764
Q ss_pred HHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCC--
Q 003693 403 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK-- 480 (802)
Q Consensus 403 ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k-- 480 (802)
.+|.+++.+..+++..+.+.++.|||+++||++|++|||||+||++++++ ||++|+..+|.+
T Consensus 319 ---------------~lgl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~-mf~~~~~g~p~~~~ 382 (778)
T cd04299 319 ---------------ELGLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSRE-MFAGLWPGFPVEEV 382 (778)
T ss_pred ---------------HcCCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHH-HhhhhhccCCcccC
Confidence 46778888878887653001248999999999999999999999999996 898888888765
Q ss_pred -ccccccccCccccccccChhHHHHHHHhcCccccccCchhHH--hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 003693 481 -LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLV--GLRQFADNTELQAEWESAKMASKKHLADYIWRVT- 556 (802)
Q Consensus 481 -~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~--~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~- 556 (802)
|.+||||||+++|+ ||+++++|++++| ++|..+++... +....++|+++ | ++|++||++|+++|++++
T Consensus 383 ~i~~ITNGVh~~~W~---~P~~~~l~~~~~g-~~w~~~~~~~~~~~~~~~i~d~~l---w-~~K~~~K~~L~~~v~~~~~ 454 (778)
T cd04299 383 PIGHVTNGVHVPTWV---APEMRELYDRYLG-GDWRERPTDPELWEAVDDIPDEEL---W-EVRQQLRRRLIEFVRRRLR 454 (778)
T ss_pred ceeceeCCcchhhhc---CHHHHHHHHHhcC-cchhhccchHHHHhhhcCCCcHHH---H-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999997 7999999999999 59999987533 33345778777 7 799999999999998876
Q ss_pred ----------------CCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCH
Q 003693 557 ----------------GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT 620 (802)
Q Consensus 557 ----------------g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~ 620 (802)
+.++||++||||||||||+|||++| +|++++||.+|++ ||. .|+||||||||||+|+
T Consensus 455 ~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~L-il~dl~rl~~il~-~~~-----~pvQ~IfaGKAhP~d~ 527 (778)
T cd04299 455 RQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATL-LLRDPERLKRLLN-DPE-----RPVQFIFAGKAHPADE 527 (778)
T ss_pred hhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCccch
Confidence 5669999999999999999999999 9999999999987 554 4999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecC
Q 003693 621 NAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 700 (802)
Q Consensus 621 ~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDG 700 (802)
.||++||.|+++++ ||++++ ||||+|||||++||+|+||||||||||+||+||||||||||||||+|++||+||
T Consensus 528 ~gK~iIk~i~~~a~----~p~~~~--kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDG 601 (778)
T cd04299 528 PGKELIQEIVEFSR----RPEFRG--RIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDG 601 (778)
T ss_pred HHHHHHHHHHHHHh----CcCCCC--cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccC
Confidence 99999999999994 999999 999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccCcceeeccc---------------------ccchHHHHhhhccCCCCCCChHHHHHHHHHHcC--CCCCC
Q 003693 701 ANVEIRQEIGEENFFLFGA---------------------VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSG--AFGSY 757 (802)
Q Consensus 701 anvEi~e~~g~~n~fiFg~---------------------~~~ev~~~~~~~~~~~~~~~~~l~~v~~~m~~g--~fs~~ 757 (802)
||.|..+ ..|||.||. .+++|++++++++-..++ ..|+++|+++|.+- .|||.
T Consensus 602 ww~E~~~---g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p-~~W~~~~k~sm~~~~p~fs~~ 677 (778)
T cd04299 602 WWDEGYD---GENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYP-PGWVAMMKHSMATLGPRFSAE 677 (778)
T ss_pred ccccccC---CCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHhcccCCCHH
Confidence 9998863 489999999 336778888776544444 68999999999981 39998
Q ss_pred C-----hHHHHHHHh
Q 003693 758 D-----YNPLLDSLE 767 (802)
Q Consensus 758 ~-----f~~ly~~l~ 767 (802)
. +...|..+.
T Consensus 678 Rmv~eY~~~~Y~p~~ 692 (778)
T cd04299 678 RMVREYVERFYLPAA 692 (778)
T ss_pred HHHHHHHHHhHHHHH
Confidence 2 455665543
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=1.8e-131 Score=1145.52 Aligned_cols=550 Identities=25% Similarity=0.405 Sum_probs=481.8
Q ss_pred EEEEEehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeecc
Q 003693 87 TYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRY 166 (802)
Q Consensus 87 vyYlSmEfl~Gr~L~nnl~NLg~~~~~~eaL~~~g~~~~~l~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY 166 (802)
|+||||||.+..+|+ +||||||||||||||||||||+|++||||+|
T Consensus 1 ~ayf~~E~g~~~~~p----------------------------------~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y 46 (601)
T TIGR02094 1 VAYFSMEYGLHESLP----------------------------------IYSGGLGVLAGDHLKSASDLGLPLVAVGLLY 46 (601)
T ss_pred CeEEeeccccCCCCC----------------------------------ccCchHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 689999999999997 9999999999999999999999999999999
Q ss_pred CCccceEEee-CCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceE
Q 003693 167 RYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTI 245 (802)
Q Consensus 167 ~~G~F~Q~i~-dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~~~~~~g~~~~~~~~~v~av~yd~pi~gy~~~~~n 245 (802)
+||||+|+|+ ||||+|.|++|+..+.||+.. .+.+|+ . ++|++||+| .++
T Consensus 47 ~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~---------------~~~~g~-------~---~~~~v~i~g----~~~ 97 (601)
T TIGR02094 47 KQGYFRQRLDEDGWQQEAYPNNDFESLPIEKV---------------LDTDGK-------W---LKISVRIRG----RDV 97 (601)
T ss_pred CCCceeEEECCCCceeecCCccccCCCceEEE---------------ecCCCC-------e---EEEEEecCC----cEE
Confidence 9999999998 999999999999999999861 123454 2 589999999 489
Q ss_pred EEEEEEeecCCCCccccccCcchhhhHHhhhhhhccccccccCCCCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCc
Q 003693 246 SLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGR 325 (802)
Q Consensus 246 ~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~ 325 (802)
++|||+++++ ++++|+||++. ++|...+|.||++|||+| +++|++||+|||+|++|+| ++ .+
T Consensus 98 ~~rlw~~~~~--~v~lylld~~~----~~n~~~~R~it~~LY~~D-----~~~R~~Qe~fl~~a~l~~l-~~---l~--- 159 (601)
T TIGR02094 98 YAKVWRVQVG--RVPLYLLDTNI----PENSEDDRWITGRLYGGD-----KEMRIAQEIVLGIGGVRAL-RA---LG--- 159 (601)
T ss_pred EEEEEEEEeC--CCCEEEecCCC----cccchhhcCccCCCCCCC-----HHHHHHHHHHHHHHHHHHH-HH---cC---
Confidence 9999999964 69999999986 456778999999999988 5789999999999999984 11 11
Q ss_pred ccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHH
Q 003693 326 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIE 405 (802)
Q Consensus 326 ~l~~l~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~ 405 (802)
.+|++||||||||||+++||||+++ +++++|++||++|+.+|+||||||+|||+|+||.+++.++||| ++++.
T Consensus 160 -----~~pdviH~ND~Htal~~~el~r~l~-~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~-~~~~~ 232 (601)
T TIGR02094 160 -----IDPDVYHLNEGHAAFVTLERIRELI-AQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGD-YAANL 232 (601)
T ss_pred -----CCceEEEeCCchHHHHHHHHHHHHH-HcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhh-hhhHh
Confidence 4899999999999999999999999 7899999999999999999999999999999999999999998 46667
Q ss_pred HHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCC---cc
Q 003693 406 EIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK---LQ 482 (802)
Q Consensus 406 ~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k---~~ 482 (802)
+|+.+++..+...++. .+++|||+++||++|++|||||++|+++++ .+|++|++++|.+ |.
T Consensus 233 gl~~~~~~~~~~~~~~---------------~~~~vnm~~lai~~S~~vngVS~lh~~v~~-~l~~~l~~~~~~~~~~i~ 296 (601)
T TIGR02094 233 GLPREQLLALGRENPD---------------DPEPFNMTVLALRLSRIANGVSKLHGEVSR-KMWQFLYPGYEEEEVPIG 296 (601)
T ss_pred CCCHHHHHhhhhhccC---------------ccCceeHHHHHHHhCCeeeeecHHHHHHHH-HHHHhhhhhcccccCCcc
Confidence 7777665544322210 124899999999999999999999999998 7899999999887 99
Q ss_pred ccccccCccccccccChhHHHHHHHhcCccccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---
Q 003693 483 NKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVT--- 559 (802)
Q Consensus 483 ~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~--- 559 (802)
|||||||+++|. ||.+..|+.++++ ++|.+++++++.|++. |....+++.++|++||++|+++|++++|..
T Consensus 297 gItNGId~~~W~---~~~~~~l~~~y~~-~~w~~~~~~~~~~~~~--~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~ 370 (601)
T TIGR02094 297 YVTNGVHNPTWV---APELRDLYERYLG-ENWRELLADEELWEAI--DDIPDEELWEVHLKLKARLIDYIRRRLRERWLR 370 (601)
T ss_pred ceeCCccccccC---CHHHHHHHHHhCC-cchhccchhhhhhhhc--ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999997 7899999999999 5899999998888874 333445555899999999999999977765
Q ss_pred --------------CCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHH
Q 003693 560 --------------IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 625 (802)
Q Consensus 560 --------------vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~i 625 (802)
+||++||||||||||+|||++| +++++++|.+|+. ||. .|+||||+|||||+|.+||++
T Consensus 371 ~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dL-il~~i~~l~~i~~-~~~-----~pvq~V~~Gka~p~d~~gk~~ 443 (601)
T TIGR02094 371 RGADAAILMATDRFLDPDVLTIGFARRFATYKRADL-IFRDLERLARILN-NPE-----RPVQIVFAGKAHPADGEGKEI 443 (601)
T ss_pred ccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCcccchHHHH
Confidence 9999999999999999999999 9999999999987 554 499999999999999999999
Q ss_pred HHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccc
Q 003693 626 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (802)
Q Consensus 626 Ik~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi 705 (802)
|++|+++|+ ||++++ ||+|++|||+++||+|+||||||||||++|+||||||||||||||+|++||+||||+|.
T Consensus 444 i~~i~~la~----~~~~~~--kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 444 IQRIVEFSK----RPEFRG--RIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEG 517 (601)
T ss_pred HHHHHHHHh----cccCCC--CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCccccc
Confidence 999999994 899999 99999999999999999999999999999999999999999999999999999999987
Q ss_pred cccccCcceeeccc-------------ccchHHHHhhhccC-CCC-C------CChHHHHHHHHHHcC--CCCCCC----
Q 003693 706 RQEIGEENFFLFGA-------------VAEQVPKLRKERED-GLF-K------PDPRFEEAKQFIRSG--AFGSYD---- 758 (802)
Q Consensus 706 ~e~~g~~n~fiFg~-------------~~~ev~~~~~~~~~-~~~-~------~~~~l~~v~~~m~~g--~fs~~~---- 758 (802)
.+ .+|||.||. .++++..+. +++. ..| + +..|+++++++|++. .|||..
T Consensus 518 ~~---~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L-~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~ 593 (601)
T TIGR02094 518 YD---GDNGWAIGDGEEYDDEEEQDRLDAEALYDLL-ENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVRE 593 (601)
T ss_pred CC---CCcEEEECCCccccccccccCCCHHHHHHHH-HHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHH
Confidence 63 379999993 335565555 2322 112 2 346999999999995 499983
Q ss_pred hHHHH
Q 003693 759 YNPLL 763 (802)
Q Consensus 759 f~~ly 763 (802)
|.++|
T Consensus 594 Y~~~y 598 (601)
T TIGR02094 594 YVDKF 598 (601)
T ss_pred HHHHh
Confidence 66655
No 10
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-44 Score=406.60 Aligned_cols=380 Identities=19% Similarity=0.183 Sum_probs=313.2
Q ss_pred ccccccCcchhhhHHhhhhhhccccccccCC-CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEe
Q 003693 259 FNLFQFNDGQYESAAQLHSRAQQICAVLYPG-DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQ 337 (802)
Q Consensus 259 ~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~-D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iH 337 (802)
+++++++++.+++- . -..+|+. |+.+ ++-||+.|+++.+ ..+ ... +.|++||
T Consensus 83 v~~~lid~~~~f~r----~-----~~~~~~~~d~~~--------Rf~~F~~a~~~~~-----~~~----~~~-~~pDIvH 135 (487)
T COG0297 83 VDLYLIDNPALFKR----P-----DSTLYGYYDNAE--------RFAFFSLAAAELA-----PLG----LIS-WLPDIVH 135 (487)
T ss_pred CcEEEecChhhcCc----c-----ccccCCCCcHHH--------HHHHHHHHHHHHh-----hhc----CCC-CCCCEEE
Confidence 66777777777751 0 1345553 6555 9999999998762 011 112 6899999
Q ss_pred eCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHHHH
Q 003693 338 LNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVR 416 (802)
Q Consensus 338 lNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~-Lpr~~~ii~~in~~~~~~~~ 416 (802)
+||||+||+ |.+|+... .. .....+|||+||+..+|+ |+...+..+ ||...
T Consensus 136 ~hDWqt~L~-~~~lk~~~--------~~--~~~i~tVfTIHNl~~qG~--~~~~~~~~lgLp~~~--------------- 187 (487)
T COG0297 136 AHDWQTGLL-PAYLKQRY--------RS--GYIIPTVFTIHNLAYQGL--FRLQYLEELGLPFEA--------------- 187 (487)
T ss_pred eecHHHHHH-HHHHhhcc--------cc--cccCCeEEEEeeceeecc--cchhhHHHhcCCHHH---------------
Confidence 999999999 88888753 01 157889999999999999 986655533 77311
Q ss_pred HhCCCCcchhcccccccCCCCCCccccccchhhcCCchhhhHHHhHHHHHhhhhc-CccccC---cCCccccccccCccc
Q 003693 417 STRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSLW---PNKLQNKTNGITPRR 492 (802)
Q Consensus 417 ~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~-~~~~l~---p~k~~~iTNGI~~rr 492 (802)
+ .+-..+. .+.+++++.||..|+.||+||++|++++.++.|+ ++.++. ..++++|.||||...
T Consensus 188 ---------~-~~~~l~~---~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~ 254 (487)
T COG0297 188 ---------Y-ASFGLEF---YGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDL 254 (487)
T ss_pred ---------h-hhceeee---cCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecc
Confidence 1 1111222 2478999999999999999999999999998887 666665 688999999999999
Q ss_pred cccccChhHHHHHHHhcCccccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeecccc
Q 003693 493 WLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR 572 (802)
Q Consensus 493 Wl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR 572 (802)
| ||+.+.++..++. +++ | ..|.+||..|.+ ++|++.+.+.++.++|.|
T Consensus 255 w----np~~d~~~~~~y~-----------------~~~------~-~~k~~nk~~L~~----~~gL~~~~~~pl~~~vsR 302 (487)
T COG0297 255 W----NPETDPYIAANYS-----------------AEV------L-PAKAENKVALQE----RLGLDVDLPGPLFGFVSR 302 (487)
T ss_pred c----CcccccchhccCC-----------------ccc------h-hhhHHHHHHHHH----HhCCCCCCCCcEEEEeec
Confidence 9 9999999987776 344 5 359999999999 999999999999999999
Q ss_pred chhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEc
Q 003693 573 IHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVP 652 (802)
Q Consensus 573 ~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~ 652 (802)
+.+||+.+| ++.+++.+.+ . ..|+|+.|+|.|.++. .+.++++.+ ++ +|.+..
T Consensus 303 l~~QKG~dl-~~~~i~~~l~--~----------~~~~vilG~gd~~le~------~~~~la~~~------~~--~~~~~i 355 (487)
T COG0297 303 LTAQKGLDL-LLEAIDELLE--Q----------GWQLVLLGTGDPELEE------ALRALASRH------PG--RVLVVI 355 (487)
T ss_pred cccccchhH-HHHHHHHHHH--h----------CceEEEEecCcHHHHH------HHHHHHHhc------Cc--eEEEEe
Confidence 999999999 9999998865 3 3799999999999999 999999988 66 899999
Q ss_pred CCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecC----cccccccc--ccCcceeeccccc-chHH
Q 003693 653 NYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG----ANVEIRQE--IGEENFFLFGAVA-EQVP 725 (802)
Q Consensus 653 nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDG----anvEi~e~--~g~~n~fiFg~~~-~ev~ 725 (802)
.|++.+|++|++|||+|+|||+ +||||.+||.+|++|+|+|++.+| +++...+. .|.+|||+|-.+. +++.
T Consensus 356 ~~~~~la~~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~ 433 (487)
T COG0297 356 GYDEPLAHLIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLA 433 (487)
T ss_pred eecHHHHHHHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHH
Confidence 9999999999999999999999 999999999999999999999999 77777776 6789999999998 8888
Q ss_pred HHhhhccCCCC-CCCh-HHHHHHHHHHcCCCCCCC----hHHHHHHHhhC
Q 003693 726 KLRKEREDGLF-KPDP-RFEEAKQFIRSGAFGSYD----YNPLLDSLEGN 769 (802)
Q Consensus 726 ~~~~~~~~~~~-~~~~-~l~~v~~~m~~g~fs~~~----f~~ly~~l~~~ 769 (802)
.+. .++...| .+.. |.+.+.++|..+ |||+. |.++|+.++..
T Consensus 434 ~al-~rA~~~y~~~~~~w~~~~~~~m~~d-~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 434 NAL-RRALVLYRAPPLLWRKVQPNAMGAD-FSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred HHH-HHHHHHhhCCHHHHHHHHHhhcccc-cCchhHHHHHHHHHHHHhcc
Confidence 887 4666666 3233 888899999988 99994 99999999864
No 11
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.7e-41 Score=400.87 Aligned_cols=494 Identities=14% Similarity=0.176 Sum_probs=354.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhhc
Q 003693 52 EPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQE 131 (802)
Q Consensus 52 ~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnl~NLg~~~~~~eaL~~~g~~~~~l~~~E 131 (802)
.-.++|..+...--..+.......... ....+-+|-++|.|..
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~mkILfVasE~a------------------------------------ 492 (977)
T PLN02939 450 RIREAYLSCKGKNEREAVENFLKLTLS-GTSSGLHIVHIAAEMA------------------------------------ 492 (977)
T ss_pred hHHHHHHHHhcCchHHHHHHHHHhccC-CCCCCCEEEEEEcccc------------------------------------
Confidence 444555555544444444444433321 1234578999998872
Q ss_pred cccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEeCCeE
Q 003693 132 KDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSV 211 (802)
Q Consensus 132 ~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~ 211 (802)
|-.=.||||--++..=++++.+|.-+.-+-=+|. ++..+.+.+ .+..+.
T Consensus 493 --P~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~-~i~~~~~~~------------------~~~~~~---------- 541 (977)
T PLN02939 493 --PVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYD-CMQYDQIRN------------------LKVLDV---------- 541 (977)
T ss_pred --cccccccHHHHHHHHHHHHHHcCCeEEEEeCCCc-ccChhhhhc------------------ccccce----------
Confidence 2245899999999999999999988877777775 332111000 000000
Q ss_pred EEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCc--c-hhhhHHhhhhhhccccccccC
Q 003693 212 MVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND--G-QYESAAQLHSRAQQICAVLYP 288 (802)
Q Consensus 212 ~~~~~g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~--~-~y~~a~~~~~~~~~It~~LYp 288 (802)
...+++.| .....++|...++ ++++|+++. + .||. +..+|+
T Consensus 542 -------------------~~~~~~~g----~~~~~~v~~~~~~--GV~vyfId~~~~~~fF~-----------R~~iYg 585 (977)
T PLN02939 542 -------------------VVESYFDG----NLFKNKIWTGTVE--GLPVYFIEPQHPSKFFW-----------RAQYYG 585 (977)
T ss_pred -------------------EEEEeecC----ceeEEEEEEEEEC--CeeEEEEecCCchhccC-----------CCCCCC
Confidence 00111111 1223578877644 678888874 2 3776 668896
Q ss_pred C-CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHH
Q 003693 289 G-DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAW 366 (802)
Q Consensus 289 ~-D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~ 366 (802)
. |+.+ ++.||+.|+++.+ ..+ +.|++|||||||+||+.|-+++.... .+ +
T Consensus 586 ~~Dn~~--------RF~~FsrAaLe~~-------------~~~~~~PDIIH~HDW~TaLV~pll~~~y~~-~~------~ 637 (977)
T PLN02939 586 EHDDFK--------RFSYFSRAALELL-------------YQSGKKPDIIHCHDWQTAFVAPLYWDLYAP-KG------F 637 (977)
T ss_pred CccHHH--------HHHHHHHHHHHHH-------------HhcCCCCCEEEECCccHHHHHHHHHHHHhh-cc------C
Confidence 4 7776 9999999999753 222 67899999999999986766644321 12 1
Q ss_pred hhcCceEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCcccccc
Q 003693 367 DITTRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMAN 445 (802)
Q Consensus 367 ~i~~~~~vyTnHT~~~eglE~w~~~l~~~~-Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~ 445 (802)
....+|||+||+.+||. ||.+.+..+ || ++.+.+...++++ -++.+|+.+
T Consensus 638 --~~~ktVfTIHNl~yQG~--f~~~~l~~lGL~------------------------~~~l~~~d~le~~-~~~~iN~LK 688 (977)
T PLN02939 638 --NSARICFTCHNFEYQGT--APASDLASCGLD------------------------VHQLDRPDRMQDN-AHGRINVVK 688 (977)
T ss_pred --CCCcEEEEeCCCcCCCc--CCHHHHHHcCCC------------------------HHHccChhhhhhc-cCCchHHHH
Confidence 34579999999999998 887766532 44 2222111112110 124899999
Q ss_pred chhhcCCchhhhHHHhHHHHHhhhhc-CccccC---cCCccccccccCccccccccChhHHHHHHHhcCccccccCchhH
Q 003693 446 LCVVSAHTVNGVAQLHSDILKADLFA-DYVSLW---PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 521 (802)
Q Consensus 446 lai~~S~~VNgVS~lH~eilk~~~f~-~~~~l~---p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l 521 (802)
.||++|+.|++||+.|++++++ .++ ++..++ ++|+.+|.||||+.+| ||..+++|+..++
T Consensus 689 ~GIv~AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~w----nPatD~~L~~~Ys----------- 752 (977)
T PLN02939 689 GAIVYSNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTW----NPSTDRFLKVQYN----------- 752 (977)
T ss_pred HHHHhCCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhc----CCccccccccccC-----------
Confidence 9999999999999999999997 565 665555 7899999999999999 9999999998888
Q ss_pred HhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCccc
Q 003693 522 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTID-PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE 600 (802)
Q Consensus 522 ~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vd-p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~ 600 (802)
++| | +.|..||..|.+ ++|++.+ ++.+++++|.|++++|+.++ ++..+.++.. .
T Consensus 753 ------~~d------l-~GK~~nK~aLRk----elGL~~~d~d~pLIg~VGRL~~QKGiDl-LleA~~~Ll~--~----- 807 (977)
T PLN02939 753 ------AND------L-QGKAANKAALRK----QLGLSSADASQPLVGCITRLVPQKGVHL-IRHAIYKTAE--L----- 807 (977)
T ss_pred ------hhh------h-hhhhhhhHHHHH----HhCCCcccccceEEEEeecCCcccChHH-HHHHHHHHhh--c-----
Confidence 555 7 699999999877 9998764 78899999999999999999 8888776532 1
Q ss_pred ccCCCCeEEEEEecC-CCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccC
Q 003693 601 RKKTTPRTIMIGGKA-FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEA 679 (802)
Q Consensus 601 ~~~~~P~~fIf~GKA-~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EA 679 (802)
+.+||++|.+ .|.++. .+..+++.+. ..+ +|.|+..|+-.+++.+++|||++++||+ +|+
T Consensus 808 -----dvqLVIvGdGp~~~~e~------eL~~La~~l~----l~d--rV~FlG~~de~lah~IYAaADIFLmPSr--~EP 868 (977)
T PLN02939 808 -----GGQFVLLGSSPVPHIQR------EFEGIADQFQ----SNN--NIRLILKYDEALSHSIYAASDMFIIPSM--FEP 868 (977)
T ss_pred -----CCEEEEEeCCCcHHHHH------HHHHHHHHcC----CCC--eEEEEeccCHHHHHHHHHhCCEEEECCC--ccC
Confidence 4689999988 454444 5666666552 245 7999999999999999999999999999 999
Q ss_pred CCcccchhhccCceEEEeecCccccccccc-------cCcceeeccccc-chHHHHhhhccCCCC--CCChHHHHHHHHH
Q 003693 680 SGTSNMKFSLNGCLIIGTLDGANVEIRQEI-------GEENFFLFGAVA-EQVPKLRKEREDGLF--KPDPRFEEAKQFI 749 (802)
Q Consensus 680 SGTs~MKa~lNGal~i~tlDGanvEi~e~~-------g~~n~fiFg~~~-~ev~~~~~~~~~~~~--~~~~~l~~v~~~m 749 (802)
||.+.|.||.+|+++|+|..|...|..... +.+|||+|.... +++.... .+....| ++..|-+++.++|
T Consensus 869 fGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL-~rAL~~~~~dpe~~~~L~~~am 947 (977)
T PLN02939 869 CGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSAL-ERAFNYYKRKPEVWKQLVQKDM 947 (977)
T ss_pred CcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHH-HHHHHHhccCHHHHHHHHHHHH
Confidence 999999999999999999999665544331 136999998655 6666655 3333333 3355777788899
Q ss_pred HcCCCCCCC----hHHHHHHHhh
Q 003693 750 RSGAFGSYD----YNPLLDSLEG 768 (802)
Q Consensus 750 ~~g~fs~~~----f~~ly~~l~~ 768 (802)
..+ |||.. |.++|..++.
T Consensus 948 ~~d-FSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 948 NID-FSWDSSASQYEELYQRAVA 969 (977)
T ss_pred Hhc-CCHHHHHHHHHHHHHHHHH
Confidence 887 99994 9999999875
No 12
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=6.1e-41 Score=383.27 Aligned_cols=451 Identities=17% Similarity=0.232 Sum_probs=330.6
Q ss_pred ccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEeCCeEE
Q 003693 133 DAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVM 212 (802)
Q Consensus 133 d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~~ 212 (802)
.|=.=.||||-.++..=++++.+|.-+.-+-=+|.. +.+. .+| ... .
T Consensus 16 ~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~-~~~~----~~~---------------~~~--~----------- 62 (489)
T PRK14098 16 SPFVRVSALADFMASFPQALEEEGFEARIMMPKYGT-INDR----KFR---------------LHD--V----------- 62 (489)
T ss_pred hhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCc-hhhh----hhc---------------ccc--c-----------
Confidence 444568999999999999999998766655555532 1100 001 000 0
Q ss_pred EcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcchhhhHHhhhhhhccccccccCC---
Q 003693 213 VNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG--- 289 (802)
Q Consensus 213 ~~~~g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~--- 289 (802)
..+ ..+++++.+ .+...+++.+..+..++++|+++++.|++ +..+|++
T Consensus 63 ------------~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~f~-----------r~~~y~~~~~ 113 (489)
T PRK14098 63 ------------LRL--SDIEVPLKE----KTDLLHVKVTALPSSKIQTYFLYNEKYFK-----------RNGLFTDMSL 113 (489)
T ss_pred ------------eEE--EEEEEeecC----eeEEEEEEEecccCCCceEEEEeCHHHcC-----------CCCcCCCCcc
Confidence 000 111222222 13334444443333358889999999997 6678964
Q ss_pred -----CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChH
Q 003693 290 -----DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWD 363 (802)
Q Consensus 290 -----D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~~iHlNDtHpalaipElmR~l~de~~l~~d 363 (802)
|+.+ ++.||+.|+++.+ +.+ +.|++||+||||+|++ |-+++..... .
T Consensus 114 g~~~~d~~~--------rf~~f~~a~l~~~-------------~~~~~~pDiiH~hdw~t~l~-~~~l~~~~~~-----~ 166 (489)
T PRK14098 114 GGDLKGSAE--------KVIFFNVGVLETL-------------QRLGWKPDIIHCHDWYAGLV-PLLLKTVYAD-----H 166 (489)
T ss_pred CCCCCcHHH--------HHHHHHHHHHHHH-------------HhcCCCCCEEEecCcHHHHH-HHHHHHHhhh-----c
Confidence 7766 9999999998752 223 5789999999999999 8788876531 1
Q ss_pred HHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCcccc
Q 003693 364 EAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRM 443 (802)
Q Consensus 364 ~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~M 443 (802)
..+ .+..+|||+||+.+||. ||...+..++|..+ ...+ +. ..+.+|+
T Consensus 167 ~~~--~~~~~V~TiHn~~~qg~--~~~~~~~~~~~~~~------------------------~~~~---~~--~~~~~n~ 213 (489)
T PRK14098 167 EFF--KDIKTVLTIHNVYRQGV--LPFKVFQKLLPEEV------------------------CSGL---HR--EGDEVNM 213 (489)
T ss_pred ccc--CCCCEEEEcCCCcccCC--CCHHHHHHhCCHHh------------------------hhhh---hh--cCCcccH
Confidence 222 46789999999999998 88877765555211 0011 10 1237899
Q ss_pred ccchhhcCCchhhhHHHhHHHHHhh-hhc-CccccC---cCCccccccccCccccccccChhHHHHHHHhcCccccccCc
Q 003693 444 ANLCVVSAHTVNGVAQLHSDILKAD-LFA-DYVSLW---PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNL 518 (802)
Q Consensus 444 a~lai~~S~~VNgVS~lH~eilk~~-~f~-~~~~l~---p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~ 518 (802)
.+.|+..|+.|++||+.+++++++. .++ ++..++ ++|+..|.||||...| ||..++.|...++
T Consensus 214 lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~----~p~~d~~~~~~~~-------- 281 (489)
T PRK14098 214 LYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQW----NPSTDKLIKKRYS-------- 281 (489)
T ss_pred HHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCcccccc----CCcccccccccCC--------
Confidence 9999999999999999999999863 333 444333 6789999999999999 8888777777776
Q ss_pred hhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCc
Q 003693 519 DLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSP 598 (802)
Q Consensus 519 ~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~ 598 (802)
+++ + +.|..||..|.+ ++|++.+++.++++++.|+.++|+.++ ++..+.++.+ .
T Consensus 282 ---------~~~------~-~~k~~~k~~l~~----~lgl~~~~~~~~i~~vgRl~~~KG~d~-li~a~~~l~~--~--- 335 (489)
T PRK14098 282 ---------IER------L-DGKLENKKALLE----EVGLPFDEETPLVGVIINFDDFQGAEL-LAESLEKLVE--L--- 335 (489)
T ss_pred ---------cch------h-hhHHHHHHHHHH----HhCCCCccCCCEEEEeccccccCcHHH-HHHHHHHHHh--c---
Confidence 333 5 688999998887 899999999999999999999999999 9888876532 1
Q ss_pred ccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCcc
Q 003693 599 QERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGME 678 (802)
Q Consensus 599 ~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~E 678 (802)
+.+||+.|.+.+.|+. .+.++++.. ++ +|.|+..|+.++++.++++||++++||+ .|
T Consensus 336 -------~~~lvivG~G~~~~~~------~l~~l~~~~------~~--~V~~~g~~~~~~~~~~~a~aDi~l~PS~--~E 392 (489)
T PRK14098 336 -------DIQLVICGSGDKEYEK------RFQDFAEEH------PE--QVSVQTEFTDAFFHLAIAGLDMLLMPGK--IE 392 (489)
T ss_pred -------CcEEEEEeCCCHHHHH------HHHHHHHHC------CC--CEEEEEecCHHHHHHHHHhCCEEEeCCC--CC
Confidence 5799999998665544 666666544 45 7999999999999999999999999999 99
Q ss_pred CCCcccchhhccCceEEEeecCcccccccccc--Ccceeeccccc-chHHHHhhhccCCCC-CCChHHHHHHHHHHcCCC
Q 003693 679 ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG--EENFFLFGAVA-EQVPKLRKEREDGLF-KPDPRFEEAKQFIRSGAF 754 (802)
Q Consensus 679 ASGTs~MKa~lNGal~i~tlDGanvEi~e~~g--~~n~fiFg~~~-~ev~~~~~~~~~~~~-~~~~~l~~v~~~m~~g~f 754 (802)
+||+++|.||++|+++|+|..|...|...+.. .+|||+|.... +++.... .+....+ +++.|.+++.++|.++ |
T Consensus 393 ~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai-~~~l~~~~~~~~~~~~~~~~~~~~-f 470 (489)
T PRK14098 393 SCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKL-GEALALYHDEERWEELVLEAMERD-F 470 (489)
T ss_pred CchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHH-HHHHHHHcCHHHHHHHHHHHhcCC-C
Confidence 99999999999999999999997766554321 36899997655 6776665 3322223 3345667778888877 9
Q ss_pred CCCC----hHHHHHHHhh
Q 003693 755 GSYD----YNPLLDSLEG 768 (802)
Q Consensus 755 s~~~----f~~ly~~l~~ 768 (802)
||+. |.++|++++.
T Consensus 471 sw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 471 SWKNSAEEYAQLYRELLG 488 (489)
T ss_pred ChHHHHHHHHHHHHHHhc
Confidence 9994 9999998863
No 13
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2.7e-38 Score=361.20 Aligned_cols=386 Identities=18% Similarity=0.195 Sum_probs=291.6
Q ss_pred EEEEEEeecCCCCccccccCcchhhhHHhhhhhhcccccc-ccCC-------CCcchhhhhhhhhhhHhhhhhHHHHHHH
Q 003693 246 SLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAV-LYPG-------DSTEEGKLLRLKQQFFLCSASLQDMILR 317 (802)
Q Consensus 246 ~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~-LYp~-------D~~~~Gk~lRLkQeyfl~~a~lqdi~r~ 317 (802)
..++|.+.++ ++++|+++++.|++ +.. +|++ |+.+ ++.||+.|+++.+ +.
T Consensus 70 ~~~~~~~~~~--~v~~~~~~~~~~f~-----------r~~~~y~~~~~~~~~d~~~--------rf~~f~~a~~~~~-~~ 127 (485)
T PRK14099 70 PARLLAARAG--GLDLFVLDAPHLYD-----------RPGNPYVGPDGKDWPDNAQ--------RFAALARAAAAIG-QG 127 (485)
T ss_pred eEEEEEEEeC--CceEEEEeChHhhC-----------CCCCCCCCccCCCCCcHHH--------HHHHHHHHHHHHH-hh
Confidence 3578887754 68899999999997 553 6742 6777 9999999999752 11
Q ss_pred HHHcccCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhh-
Q 003693 318 FKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKL- 396 (802)
Q Consensus 318 ~~~~~g~~~l~~l~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~- 396 (802)
+..-++|++||+||||++++ |-+++..- ..+..+|||+||+..+|. ||..++..+
T Consensus 128 ---------~~~~~~pDIiH~Hdw~~~l~-~~~l~~~~------------~~~~~~V~TiHn~~~qg~--~~~~~~~~~~ 183 (485)
T PRK14099 128 ---------LVPGFVPDIVHAHDWQAGLA-PAYLHYSG------------RPAPGTVFTIHNLAFQGQ--FPRELLGALG 183 (485)
T ss_pred ---------hccCCCCCEEEECCcHHHHH-HHHHHhCC------------CCCCCEEEeCCCCCCCCc--CCHHHHHHcC
Confidence 10115789999999999998 76665310 124569999999999998 887766533
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccchhhcCCchhhhHHHhHHHHHhhhhc-Cccc
Q 003693 397 LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVS 475 (802)
Q Consensus 397 Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~-~~~~ 475 (802)
+| ++.+ .+..++. .+.+|+.+.++..|+.|++||+.+++.+++..++ ++..
T Consensus 184 ~~------------------------~~~~-~~~~~~~---~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~ 235 (485)
T PRK14099 184 LP------------------------PSAF-SLDGVEY---YGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDG 235 (485)
T ss_pred CC------------------------hHHc-Cchhhhh---CCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHH
Confidence 33 1111 1111121 2367999999999999999999999999876443 4443
Q ss_pred cC---cCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHH
Q 003693 476 LW---PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYI 552 (802)
Q Consensus 476 l~---p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i 552 (802)
++ ++|+..|.||||+..| ||..++.+...++ +++ + +.|..||..|.+
T Consensus 236 ~l~~~~~ki~vI~NGID~~~f----~p~~~~~~~~~~~-----------------~~~------~-~~k~~~k~~l~~-- 285 (485)
T PRK14099 236 LLRQRADRLSGILNGIDTAVW----NPATDELIAATYD-----------------VET------L-AARAANKAALQA-- 285 (485)
T ss_pred HHHhhCCCeEEEecCCchhhc----cccccchhhhcCC-----------------hhH------H-HhHHHhHHHHHH--
Confidence 33 6789999999999999 8998888877776 333 5 688899988877
Q ss_pred HHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHH
Q 003693 553 WRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDV 632 (802)
Q Consensus 553 ~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~v 632 (802)
++|++.+++.+++++|.|+.++|+.++ ++..+.++.+ . +.++|+.|.+.+.++. .+.++
T Consensus 286 --~~gl~~~~~~~li~~VgRL~~~KG~d~-Li~A~~~l~~--~----------~~~lvivG~G~~~~~~------~l~~l 344 (485)
T PRK14099 286 --RFGLDPDPDALLLGVISRLSWQKGLDL-LLEALPTLLG--E----------GAQLALLGSGDAELEA------RFRAA 344 (485)
T ss_pred --HcCCCcccCCcEEEEEecCCccccHHH-HHHHHHHHHh--c----------CcEEEEEecCCHHHHH------HHHHH
Confidence 899988889999999999999999999 8888776532 2 4689999998654444 55566
Q ss_pred HHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccc---
Q 003693 633 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI--- 709 (802)
Q Consensus 633 a~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~--- 709 (802)
++.. ++ +|+++.+|+..+++.+.++||++++||+ +|+||+++|.||..|+++|+|..|...|+....
T Consensus 345 ~~~~------~~--~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~ 414 (485)
T PRK14099 345 AQAY------PG--QIGVVIGYDEALAHLIQAGADALLVPSR--FEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEM 414 (485)
T ss_pred HHHC------CC--CEEEEeCCCHHHHHHHHhcCCEEEECCc--cCCCcHHHHHHHHCCCCcEEeCCCCccceeeccccc
Confidence 6543 34 6777888999999999999999999999 999999999999999999999888665543322
Q ss_pred ----cCcceeeccccc-chHHHHhhhccCCCC-CCChHHHHHHHHHHcCCCCCCC----hHHHHHHHhh
Q 003693 710 ----GEENFFLFGAVA-EQVPKLRKEREDGLF-KPDPRFEEAKQFIRSGAFGSYD----YNPLLDSLEG 768 (802)
Q Consensus 710 ----g~~n~fiFg~~~-~ev~~~~~~~~~~~~-~~~~~l~~v~~~m~~g~fs~~~----f~~ly~~l~~ 768 (802)
|.+|||+|.... +++.... .+....+ +++.|.++..++|.+. |||.. |.++|++++.
T Consensus 415 ~~~~~~~~G~l~~~~d~~~La~ai-~~a~~l~~d~~~~~~l~~~~~~~~-fSw~~~a~~y~~lY~~l~~ 481 (485)
T PRK14099 415 AIATGVATGVQFSPVTADALAAAL-RKTAALFADPVAWRRLQRNGMTTD-VSWRNPAQHYAALYRSLVA 481 (485)
T ss_pred ccccCCCceEEeCCCCHHHHHHHH-HHHHHHhcCHHHHHHHHHHhhhhc-CChHHHHHHHHHHHHHHHh
Confidence 347999998765 6776665 2211123 3356777788888877 99994 9999999874
No 14
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=7.3e-37 Score=346.68 Aligned_cols=442 Identities=18% Similarity=0.214 Sum_probs=322.7
Q ss_pred cCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEeCCeEEE
Q 003693 134 AALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV 213 (802)
Q Consensus 134 ~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~~~ 213 (802)
|-.-.||||...++.-++|+.+|.-+.-+.-+|.... +.|... . ++.
T Consensus 12 P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~--------------~~~~~~-----~-------~~~------- 58 (473)
T TIGR02095 12 PFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIE--------------DEVDDQ-----V-------KVV------- 58 (473)
T ss_pred cccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChh--------------hhhccC-----e-------EEE-------
Confidence 4456899999999999999999998888888777531 000000 0 000
Q ss_pred cCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcchhhhHHhhhhhhcccc-ccccCC---
Q 003693 214 NPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQIC-AVLYPG--- 289 (802)
Q Consensus 214 ~~~g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It-~~LYp~--- 289 (802)
....+++.| ....+++|...++ ++++++++++.|++ + ..+|++
T Consensus 59 ----------------~~~~~~~~~----~~~~~~~~~~~~~--~v~~~~i~~~~~~~-----------r~~~~y~~~~~ 105 (473)
T TIGR02095 59 ----------------ELVDLSVGP----RTLYVKVFEGVVE--GVPVYFIDNPSLFD-----------RPGGIYGDDYP 105 (473)
T ss_pred ----------------EEEEEeecC----ceeEEEEEEEEEC--CceEEEEECHHHcC-----------CCCCCCCCCCC
Confidence 111222222 3556788887754 68889999888775 4 359984
Q ss_pred CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhc
Q 003693 290 DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDIT 369 (802)
Q Consensus 290 D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~ 369 (802)
|+. .++.+|+.|+++.+. + .+ .+|++||+||||++++ +-+++..... .
T Consensus 106 d~~--------~r~~~f~~a~~~~~~-~---~~--------~~~DiiH~hdw~~~~~-~~~l~~~~~~-----------~ 153 (473)
T TIGR02095 106 DNA--------ERFAFFSRAAAELLS-G---LG--------WQPDVVHAHDWHTALV-PALLKAVYRP-----------N 153 (473)
T ss_pred CHH--------HHHHHHHHHHHHHHH-h---cC--------CCCCEEEECCcHHHHH-HHHHHhhccC-----------C
Confidence 443 378999999987531 1 11 4688999999999998 6667654321 1
Q ss_pred CceEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccchh
Q 003693 370 TRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCV 448 (802)
Q Consensus 370 ~~~~vyTnHT~~~eglE~w~~~l~~~~-Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai 448 (802)
+..++||+|++.++|. +|...+..+ +| +..+ .....+. .+.+||...++
T Consensus 154 ~~~~v~TiH~~~~~g~--~~~~~~~~~~~~------------------------~~~~-~~~~~~~---~~~~~~~k~~~ 203 (473)
T TIGR02095 154 PIKTVFTIHNLAYQGV--FPADDFSELGLP------------------------PEYF-HMEGLEF---YGRVNFLKGGI 203 (473)
T ss_pred CCCEEEEcCCCccCCc--CCHHHHHHcCCC------------------------hHHc-Cchhhhc---CCchHHHHHHH
Confidence 4689999999999996 887766532 22 1111 1111111 23789999999
Q ss_pred hcCCchhhhHHHhHHHHHhhhhc-Ccccc---CcCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhh
Q 003693 449 VSAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (802)
Q Consensus 449 ~~S~~VNgVS~lH~eilk~~~f~-~~~~l---~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l 524 (802)
..|+.|++||+.|++.+++..++ ++..+ -++++..|.|||+..+| ||..+..+...++
T Consensus 204 ~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~----~p~~~~~~~~~~~-------------- 265 (473)
T TIGR02095 204 VYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVW----NPATDPYLKANYS-------------- 265 (473)
T ss_pred HhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCcccc----CCCCCcccccCcC--------------
Confidence 99999999999999998865454 33322 36799999999999999 8887776665554
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCC
Q 003693 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 604 (802)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~ 604 (802)
+++ | +.|..+|..|.+ ++|++.+++.++++++.|+.++|+.++ ++..+.++.+ .
T Consensus 266 ---~~~------~-~~k~~~k~~l~~----~~gl~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~--------- 319 (473)
T TIGR02095 266 ---ADD------L-AGKAENKEALQE----ELGLPVDDDVPLFGVISRLTQQKGVDL-LLAALPELLE--L--------- 319 (473)
T ss_pred ---ccc------h-hhhhhhHHHHHH----HcCCCccCCCCEEEEEecCccccChHH-HHHHHHHHHH--c---------
Confidence 233 5 577888888766 899988889999999999999999999 8888877643 2
Q ss_pred CCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCccc
Q 003693 605 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 684 (802)
Q Consensus 605 ~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~ 684 (802)
+.+|+++|+++|.+.. .+.++++.. ++ +|.|+..|+.++++.++++||++++||+ +|+||++.
T Consensus 320 -~~~lvi~G~g~~~~~~------~l~~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~ 382 (473)
T TIGR02095 320 -GGQLVVLGTGDPELEE------ALRELAERY------PG--NVRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQ 382 (473)
T ss_pred -CcEEEEECCCCHHHHH------HHHHHHHHC------CC--cEEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHH
Confidence 4799999999876554 555666433 34 6999999999999999999999999999 99999999
Q ss_pred chhhccCceEEEeecCccccccccc----cCcceeeccccc-chHHHHhhhccCCCC--CCChHHHHHHHHHHcCCCCCC
Q 003693 685 MKFSLNGCLIIGTLDGANVEIRQEI----GEENFFLFGAVA-EQVPKLRKEREDGLF--KPDPRFEEAKQFIRSGAFGSY 757 (802)
Q Consensus 685 MKa~lNGal~i~tlDGanvEi~e~~----g~~n~fiFg~~~-~ev~~~~~~~~~~~~--~~~~~l~~v~~~m~~g~fs~~ 757 (802)
|.||.+|+++|+|..|..-|+.+.. ..+|||+|.... +++..... +....+ +++.|.++..+++.+. |||+
T Consensus 383 lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~-~~l~~~~~~~~~~~~~~~~~~~~~-fsw~ 460 (473)
T TIGR02095 383 LYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALS-RALRLYRQDPSLWEALQKNAMSQD-FSWD 460 (473)
T ss_pred HHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHhccC-CCcH
Confidence 9999999999999999766655432 237899998654 67766652 223223 3344667778888766 9999
Q ss_pred C----hHHHHHHH
Q 003693 758 D----YNPLLDSL 766 (802)
Q Consensus 758 ~----f~~ly~~l 766 (802)
. |.++|++|
T Consensus 461 ~~a~~~~~~Y~~l 473 (473)
T TIGR02095 461 KSAKQYVELYRSL 473 (473)
T ss_pred HHHHHHHHHHHhC
Confidence 4 88888764
No 15
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=7e-36 Score=338.97 Aligned_cols=438 Identities=19% Similarity=0.233 Sum_probs=315.0
Q ss_pred ccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEeCCeEE
Q 003693 133 DAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVM 212 (802)
Q Consensus 133 d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~~ 212 (802)
.|-.-.||||.-.+..-++++.+|.-+.-+.=+|..- . +. .++ ..
T Consensus 11 ~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~-~-----~~----~~~----------~~--------------- 55 (466)
T PRK00654 11 APLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAI-R-----EK----LRD----------AQ--------------- 55 (466)
T ss_pred ccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcch-h-----hh----hcC----------ce---------------
Confidence 3445689999999999999999998888777666431 1 00 000 00
Q ss_pred EcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcchhhhHHhhhhhhccccccccC-CCC
Q 003693 213 VNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYP-GDS 291 (802)
Q Consensus 213 ~~~~g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp-~D~ 291 (802)
.+..+ + ..++|......+++++++++++.|++ +..+|+ .|+
T Consensus 56 -------------~~~~~--~------------~~~~~~~~~~~~gv~v~~v~~~~~~~-----------~~~~y~~~d~ 97 (466)
T PRK00654 56 -------------VVGRL--D------------LFTVLFGHLEGDGVPVYLIDAPHLFD-----------RPSGYGYPDN 97 (466)
T ss_pred -------------EEEEe--e------------eEEEEEEeEEcCCceEEEEeCHHHcC-----------CCCCCCCcCh
Confidence 00000 0 13455543223457777888877776 567887 466
Q ss_pred cchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcC
Q 003693 292 TEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT 370 (802)
Q Consensus 292 ~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~ 370 (802)
.+ ++.||+.|+++.+ +.+ .+|++||+||||++++ +.+++... .. . ..+
T Consensus 98 ~~--------r~~~f~~~~~~~~-------------~~~~~~pDiiH~h~w~~~~~-~~~l~~~~-~~------~--~~~ 146 (466)
T PRK00654 98 GE--------RFAFFSWAAAEFA-------------EGLDPRPDIVHAHDWHTGLI-PALLKEKY-WR------G--YPD 146 (466)
T ss_pred HH--------HHHHHHHHHHHHH-------------HhcCCCCceEEECCcHHHHH-HHHHHHhh-hc------c--CCC
Confidence 55 7779999998752 222 4789999999999998 66666432 11 1 135
Q ss_pred ceEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccchhh
Q 003693 371 RTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVV 449 (802)
Q Consensus 371 ~~~vyTnHT~~~eglE~w~~~l~~~~-Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai~ 449 (802)
..+|||+|++.++|. |+.+.+..+ +| ++.+ .....+. .+.+|+...++.
T Consensus 147 ~~~v~TiH~~~~~g~--~~~~~~~~~~~~------------------------~~~~-~~~~~~~---~~~~~~~~~~~~ 196 (466)
T PRK00654 147 IKTVFTIHNLAYQGL--FPAEILGELGLP------------------------AEAF-HLEGLEF---YGQISFLKAGLY 196 (466)
T ss_pred CCEEEEcCCCcCCCc--CCHHHHHHcCCC------------------------hHHc-Cchhhhc---CCcccHHHHHHH
Confidence 789999999999997 877766532 32 1111 1111111 136899999999
Q ss_pred cCCchhhhHHHhHHHHHhhhhc-Ccccc---CcCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhhh
Q 003693 450 SAHTVNGVAQLHSDILKADLFA-DYVSL---WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 525 (802)
Q Consensus 450 ~S~~VNgVS~lH~eilk~~~f~-~~~~l---~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~ 525 (802)
.|+.|++||+.+.+.+++..++ ++..+ -++|+..|.|||+...| ||..++.+...++
T Consensus 197 ~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~----~p~~~~~~~~~~~--------------- 257 (466)
T PRK00654 197 YADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIW----NPETDPLLAANYS--------------- 257 (466)
T ss_pred hcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCcccc----CCccCcccccccC---------------
Confidence 9999999999999999876564 44332 36789999999999999 8888777776666
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCC
Q 003693 526 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 605 (802)
Q Consensus 526 ~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~ 605 (802)
.++ + +.|..+|..|.+ ++|++ +++.++++++.|+.++|+.++ ++..+.++.+ .
T Consensus 258 --~~~------~-~~k~~~k~~l~~----~~gl~-~~~~~~i~~vGRl~~~KG~~~-li~a~~~l~~--~---------- 310 (466)
T PRK00654 258 --ADD------L-EGKAENKRALQE----RFGLP-DDDAPLFAMVSRLTEQKGLDL-VLEALPELLE--Q---------- 310 (466)
T ss_pred --hhh------h-hchHHHHHHHHH----HhCCC-CCCCcEEEEeeccccccChHH-HHHHHHHHHh--c----------
Confidence 222 5 578888888876 88986 557899999999999999999 8888776532 1
Q ss_pred CeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccc
Q 003693 606 PRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNM 685 (802)
Q Consensus 606 P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~M 685 (802)
+.+++++|.+.|.+.. .+.++++.+ ++ +|+|+.+|+..+++.++++||++++||+ +|+||++.|
T Consensus 311 ~~~lvivG~g~~~~~~------~l~~l~~~~------~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~l 374 (466)
T PRK00654 311 GGQLVLLGTGDPELEE------AFRALAARY------PG--KVGVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQL 374 (466)
T ss_pred CCEEEEEecCcHHHHH------HHHHHHHHC------CC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHH
Confidence 5789999998765544 556666544 34 6888899999999999999999999999 999999999
Q ss_pred hhhccCceEEEeecCcccccccc----ccCcceeeccccc-chHHHHhhhccCCCC-CCChHHHHHHHHHHcCCCCCCC-
Q 003693 686 KFSLNGCLIIGTLDGANVEIRQE----IGEENFFLFGAVA-EQVPKLRKEREDGLF-KPDPRFEEAKQFIRSGAFGSYD- 758 (802)
Q Consensus 686 Ka~lNGal~i~tlDGanvEi~e~----~g~~n~fiFg~~~-~ev~~~~~~~~~~~~-~~~~~l~~v~~~m~~g~fs~~~- 758 (802)
.||.+|+++|+|..|...|+... .+.+|||+|.... +++..... +....+ +++.|.++..+++... |||+.
T Consensus 375 EAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~-~~l~~~~~~~~~~~~~~~~~~~~-fsw~~~ 452 (466)
T PRK00654 375 YALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALR-RALELYRQPPLWRALQRQAMAQD-FSWDKS 452 (466)
T ss_pred HHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHH-HHHHHhcCHHHHHHHHHHHhccC-CChHHH
Confidence 99999999999998866554332 2337899998655 66766552 222222 3344667778888766 99994
Q ss_pred ---hHHHHHHHhh
Q 003693 759 ---YNPLLDSLEG 768 (802)
Q Consensus 759 ---f~~ly~~l~~ 768 (802)
|.++|+.++.
T Consensus 453 a~~~~~lY~~~~~ 465 (466)
T PRK00654 453 AEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHHHhh
Confidence 9999998863
No 16
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=1e-35 Score=335.72 Aligned_cols=452 Identities=18% Similarity=0.235 Sum_probs=321.2
Q ss_pred ccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEeCCe
Q 003693 131 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 210 (802)
Q Consensus 131 E~d~~LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~ 210 (802)
|..|-.-.||||...++.-++|+.+|..+.-+.-+|....- .|.. ..+. ..
T Consensus 8 E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~--------------~~~~-----~~~~-----~~----- 58 (476)
T cd03791 8 EVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILD--------------ELRG-----QLLV-----LR----- 58 (476)
T ss_pred cccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhh--------------Hhcc-----CeEE-----EE-----
Confidence 34455589999999999999999999999988888875421 1000 0000 00
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcchhhhHHhhhhhhccccccccCCC
Q 003693 211 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGD 290 (802)
Q Consensus 211 ~~~~~~g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~D 290 (802)
...+++.+ .....++|...+. ++++++++++.++. +..+|++
T Consensus 59 --------------------~~~~~~~~----~~~~~~~~~~~~~--gv~~~~l~~~~~~~-----------~~~~~~~- 100 (476)
T cd03791 59 --------------------LFGVPVGG----RPEYVGVFELPVD--GVPVYFLDNPDYFD-----------RPGLYDD- 100 (476)
T ss_pred --------------------EEeeccCC----ceeEEEEEEEEeC--CceEEEEcChHHcC-----------CCCCCCc-
Confidence 00112222 2445677777643 67888888777664 3333311
Q ss_pred CcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhc
Q 003693 291 STEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDIT 369 (802)
Q Consensus 291 ~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~ 369 (802)
...+-.-++.++.+|+.|+++.+ ..+ .+|++||+||||++++ +.+++..... .. ..
T Consensus 101 -~~~~~~~~~~~~~~f~~~~~~~l-------------~~~~~~pDviH~hd~~t~~~-~~~l~~~~~~------~~--~~ 157 (476)
T cd03791 101 -SGYDYEDNAERFALFSRAALELL-------------RRLGWKPDIIHCHDWHTGLV-PALLKEKYAD------PF--FK 157 (476)
T ss_pred -cCCCCccHHHHHHHHHHHHHHHH-------------HhcCCCCcEEEECchHHHHH-HHHHHHhhcc------cc--CC
Confidence 01111235558899999998752 222 5789999999999998 6666654321 11 25
Q ss_pred CceEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccchh
Q 003693 370 TRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCV 448 (802)
Q Consensus 370 ~~~~vyTnHT~~~eglE~w~~~l~~~~-Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai 448 (802)
+..+|||+|++.++|. ++...+... ++ ++....+..... ...++|...++
T Consensus 158 ~~~~v~tiH~~~~~g~--~~~~~~~~~~~~------------------------~~~~~~~~~~~~---~~~~~~~~~~~ 208 (476)
T cd03791 158 NIKTVFTIHNLAYQGV--FPLEALEDLGLP------------------------WEELFHIDGLEF---YGQVNFLKAGI 208 (476)
T ss_pred CCCEEEEeCCCCCCCC--CCHHHHHHcCCC------------------------ccchhhhccccc---CCcccHHHHHH
Confidence 7789999999999997 877766532 21 100001111111 23789999999
Q ss_pred hcCCchhhhHHHhHHHHHhhhhc-CccccC---cCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhh
Q 003693 449 VSAHTVNGVAQLHSDILKADLFA-DYVSLW---PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (802)
Q Consensus 449 ~~S~~VNgVS~lH~eilk~~~f~-~~~~l~---p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l 524 (802)
..|+.|++||+.|.+++++..++ ++..++ +.++..|+|||+...| +|..+..+...+.
T Consensus 209 ~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~----~p~~~~~~~~~~~-------------- 270 (476)
T cd03791 209 VYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVW----NPATDPHLPANYS-------------- 270 (476)
T ss_pred HhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCccc----CccccchhhhcCC--------------
Confidence 99999999999999999876544 444443 5789999999999999 7877766665544
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCC
Q 003693 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 604 (802)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~ 604 (802)
.++ + ..|..+|..|.+ ++|++.+++.++++++.|+.++|+.++ ++.++.++.+ .
T Consensus 271 ---~~~------~-~~~~~~k~~l~~----~~g~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~--------- 324 (476)
T cd03791 271 ---ADD------L-EGKAENKAALQE----ELGLPVDPDAPLFGFVGRLTEQKGIDL-LLEALPELLE--L--------- 324 (476)
T ss_pred ---ccc------c-ccHHHHHHHHHH----HcCCCcCCCCCEEEEEeeccccccHHH-HHHHHHHHHH--c---------
Confidence 112 4 688899998887 999988899999999999999999999 8888877543 2
Q ss_pred CCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCccc
Q 003693 605 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSN 684 (802)
Q Consensus 605 ~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~ 684 (802)
+.+|++.|++.+.+.. .+.++++.. .+ +|+|+.+|+..+++.++++||++++||+ +|+||++.
T Consensus 325 -~~~lvi~G~g~~~~~~------~~~~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~ 387 (476)
T cd03791 325 -GGQLVILGSGDPEYEE------ALRELAARY------PG--RVAVLIGYDEALAHLIYAGADFFLMPSR--FEPCGLTQ 387 (476)
T ss_pred -CcEEEEEecCCHHHHH------HHHHHHHhC------CC--cEEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCcHHH
Confidence 4799999999765443 566666533 44 7999999999999999999999999999 99999999
Q ss_pred chhhccCceEEEeecCccccccccc----cCcceeeccccc-chHHHHhhhccCCCC-CCChHHHHHHHHHHcCCCCCCC
Q 003693 685 MKFSLNGCLIIGTLDGANVEIRQEI----GEENFFLFGAVA-EQVPKLRKEREDGLF-KPDPRFEEAKQFIRSGAFGSYD 758 (802)
Q Consensus 685 MKa~lNGal~i~tlDGanvEi~e~~----g~~n~fiFg~~~-~ev~~~~~~~~~~~~-~~~~~l~~v~~~m~~g~fs~~~ 758 (802)
|.||++|+++|+|..|...|+..+. +.+|||+|.... +++..... ...+.+ +++.|.++..+++... |||+.
T Consensus 388 lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~-~~l~~~~~~~~~~~~~~~~~~~~-fsw~~ 465 (476)
T cd03791 388 MYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALR-RALALYRDPEAWRKLQRNAMAQD-FSWDR 465 (476)
T ss_pred HHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHH-HHHHHHcCHHHHHHHHHHHhccC-CChHH
Confidence 9999999999999999776655432 234899998764 66766652 222222 3466778888888877 99984
Q ss_pred ----hHHHHH
Q 003693 759 ----YNPLLD 764 (802)
Q Consensus 759 ----f~~ly~ 764 (802)
|.++|+
T Consensus 466 ~a~~~~~~y~ 475 (476)
T cd03791 466 SAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHh
Confidence 666664
No 17
>PLN02316 synthase/transferase
Probab=100.00 E-value=7.3e-33 Score=334.04 Aligned_cols=411 Identities=17% Similarity=0.216 Sum_probs=295.2
Q ss_pred CCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcCC
Q 003693 137 GNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPN 216 (802)
Q Consensus 137 gnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~~~~~~ 216 (802)
=.||||.-.+..-++|+.+|.-+.-+.-+|.. +....+.+ +.
T Consensus 602 KvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~-i~~~~~~~------------------~~------------------- 643 (1036)
T PLN02316 602 KVGGLGDVVTSLSRAVQDLNHNVDIILPKYDC-LNLSHVKD------------------LH------------------- 643 (1036)
T ss_pred CcCcHHHHHHHHHHHHHHcCCEEEEEecCCcc-cchhhccc------------------ce-------------------
Confidence 37999999999999999999877777776652 10000000 00
Q ss_pred CceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcc-hhhhHHhhhhhhccccccccC-CCCcch
Q 003693 217 GTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG-QYESAAQLHSRAQQICAVLYP-GDSTEE 294 (802)
Q Consensus 217 g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~-~y~~a~~~~~~~~~It~~LYp-~D~~~~ 294 (802)
.+ .+| +..| ..+++|...++ ++++|++++. .+|. +..+|+ .|+.+
T Consensus 644 ---------~~--~~~--~~~~------~~~~v~~~~~~--GV~vyfl~~~~~~F~-----------r~~~Yg~~Dd~~- 690 (1036)
T PLN02316 644 ---------YQ--RSY--SWGG------TEIKVWFGKVE--GLSVYFLEPQNGMFW-----------AGCVYGCRNDGE- 690 (1036)
T ss_pred ---------EE--EEe--ccCC------EEEEEEEEEEC--CcEEEEEeccccccC-----------CCCCCCchhHHH-
Confidence 00 011 1111 13456666543 4666667654 3554 445786 47666
Q ss_pred hhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEE
Q 003693 295 GKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVA 374 (802)
Q Consensus 295 Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~v 374 (802)
++.|||.|+++.+. + . -+.|++|||||||+|++ |-+++......+ . .+..+|
T Consensus 691 -------RF~~F~~Aale~l~-~---~--------~~~PDIIHaHDW~talv-a~llk~~~~~~~------~--~~~p~V 742 (1036)
T PLN02316 691 -------RFGFFCHAALEFLL-Q---S--------GFHPDIIHCHDWSSAPV-AWLFKDHYAHYG------L--SKARVV 742 (1036)
T ss_pred -------HHHHHHHHHHHHHH-h---c--------CCCCCEEEECCChHHHH-HHHHHHhhhhhc------c--CCCCEE
Confidence 99999999998632 1 1 15789999999999998 777776543211 1 456899
Q ss_pred EeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccchhhcCCch
Q 003693 375 YTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTV 454 (802)
Q Consensus 375 yTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai~~S~~V 454 (802)
||+|++.+++ ++...++..|+.|
T Consensus 743 ~TiHnl~~~~---------------------------------------------------------n~lk~~l~~AD~V 765 (1036)
T PLN02316 743 FTIHNLEFGA---------------------------------------------------------NHIGKAMAYADKA 765 (1036)
T ss_pred EEeCCcccch---------------------------------------------------------hHHHHHHHHCCEE
Confidence 9999875321 0111356789999
Q ss_pred hhhHHHhHHHHHhhhhcCccccC--cCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhhhccCCCHH
Q 003693 455 NGVAQLHSDILKADLFADYVSLW--PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTE 532 (802)
Q Consensus 455 NgVS~lH~eilk~~~f~~~~~l~--p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~ 532 (802)
++||+.+++.+.+. ..+- ++|+..|.||||+.+| ||..+..++..++ ++|
T Consensus 766 iTVS~tya~EI~~~-----~~l~~~~~Kl~vI~NGID~~~w----~P~tD~~lp~~y~-----------------~~~-- 817 (1036)
T PLN02316 766 TTVSPTYSREVSGN-----SAIAPHLYKFHGILNGIDPDIW----DPYNDNFIPVPYT-----------------SEN-- 817 (1036)
T ss_pred EeCCHHHHHHHHhc-----cCcccccCCEEEEECCcccccc----CCcccccccccCC-----------------chh--
Confidence 99999999888753 1222 4789999999999999 8999888887776 334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEE
Q 003693 533 LQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG 612 (802)
Q Consensus 533 ~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~ 612 (802)
+.+.|..+|..|.+ ++|++ +++.+++++|.||+++|+.+| ++..+.++.+ . +.+||++
T Consensus 818 ----~~~gK~~~k~~Lr~----~lGL~-~~d~plVg~VGRL~~qKGvdl-Li~Al~~ll~--~----------~~qlVIv 875 (1036)
T PLN02316 818 ----VVEGKRAAKEALQQ----RLGLK-QADLPLVGIITRLTHQKGIHL-IKHAIWRTLE--R----------NGQVVLL 875 (1036)
T ss_pred ----hhhhhhhhHHHHHH----HhCCC-cccCeEEEEEeccccccCHHH-HHHHHHHHhh--c----------CcEEEEE
Confidence 33678899999877 89987 468899999999999999999 9888877643 2 5789999
Q ss_pred ecC-CCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccC
Q 003693 613 GKA-FATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNG 691 (802)
Q Consensus 613 GKA-~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNG 691 (802)
|.+ .|.++. .+.++++.+.. ..++ +|.|...|+..+++.+++|||++++||+ +|+||+++|.||.+|
T Consensus 876 G~Gpd~~~e~------~l~~La~~Lg~--~~~~--rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~G 943 (1036)
T PLN02316 876 GSAPDPRIQN------DFVNLANQLHS--SHHD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRYG 943 (1036)
T ss_pred eCCCCHHHHH------HHHHHHHHhCc--cCCC--eEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHcC
Confidence 987 443333 45555553311 1256 8999999999999999999999999999 999999999999999
Q ss_pred ceEEEeecCccccccccc----------c-Ccceeeccccc-chHHHHhhhccCCCC-CCChH-HHHHHHHHHcCCCCCC
Q 003693 692 CLIIGTLDGANVEIRQEI----------G-EENFFLFGAVA-EQVPKLRKEREDGLF-KPDPR-FEEAKQFIRSGAFGSY 757 (802)
Q Consensus 692 al~i~tlDGanvEi~e~~----------g-~~n~fiFg~~~-~ev~~~~~~~~~~~~-~~~~~-l~~v~~~m~~g~fs~~ 757 (802)
+++|+|..|-..|..... | .+|||+|.... +++.... .++...| +...| -+.+++.|..+ |||.
T Consensus 944 tppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL-~raL~~~~~~~~~~~~~~r~~m~~d-FSW~ 1021 (1036)
T PLN02316 944 SIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYAL-NRAISAWYDGRDWFNSLCKRVMEQD-WSWN 1021 (1036)
T ss_pred CCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHH-HHHHhhhhhhHHHHHHHHHHHHHhh-CCHH
Confidence 999999999665544332 1 36999998865 6676666 4445544 32334 66788999999 9999
Q ss_pred C----hHHHHHHHh
Q 003693 758 D----YNPLLDSLE 767 (802)
Q Consensus 758 ~----f~~ly~~l~ 767 (802)
. |.+||+.+.
T Consensus 1022 ~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1022 RPALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHHh
Confidence 4 999999875
No 18
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.80 E-value=1.6e-20 Score=197.46 Aligned_cols=222 Identities=17% Similarity=0.233 Sum_probs=144.9
Q ss_pred CCCCCcccchhhhHhhhhccCCCeEEEeeccCCccceEEeeCCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcC
Q 003693 136 LGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNP 215 (802)
Q Consensus 136 LgnGGLGrLAac~ldS~a~l~~p~~g~GirY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~g~~~~~~ 215 (802)
.-.||||..++..-++++.+|..+.-+--+|.. + .... .|.+. +. .+.+.+.|
T Consensus 13 ~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~-~-~~~~---~~~~~------------~~----~~~~~~~~------ 65 (245)
T PF08323_consen 13 AKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGF-I-DEEY---FQLEP------------VR----RLSVPFGG------ 65 (245)
T ss_dssp B-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THH-H-HHHC---TTEEE------------EE----EES-STTC------
T ss_pred cccCcHhHHHHHHHHHHHhcCCeEEEEEccchh-h-hhhh---hcceE------------EE----Eecccccc------
Confidence 678999999999999999999999888877722 2 1111 00000 00 00011111
Q ss_pred CCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEEeecCCCCccccccCcchhhhHHhhhhhhccccccccCC------
Q 003693 216 NGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPG------ 289 (802)
Q Consensus 216 ~g~~~~~~~~~v~av~yd~pi~gy~~~~~n~lrLw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LYp~------ 289 (802)
. ++.+. . ..+++|+.... ++++++++++.|++ +..+|++
T Consensus 66 ----------~---v~~~~-~--------~~~~v~~~~~~--~v~v~~i~~~~~f~-----------r~~iY~~~~~~~~ 110 (245)
T PF08323_consen 66 ----------P---VPVGV-W--------YEVRVYRYPVD--GVPVYFIDNPEYFD-----------RPGIYGDNGGDYP 110 (245)
T ss_dssp ----------E---EEEE-------------EEEEEEEET--TEEEEEEESHHHHG-----------SSSSSBSTSSBHT
T ss_pred ----------c---ccccc-c--------eEEEEEEEEcC--CccEEEecChhhcc-----------ccceeccCCCcch
Confidence 0 11111 0 34678888753 79999999999987 7779974
Q ss_pred CCcchhhhhhhhhhhHhhhhhHHHHHHHHHHcccCcccccC-CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhh
Q 003693 290 DSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDI 368 (802)
Q Consensus 290 D~~~~Gk~lRLkQeyfl~~a~lqdi~r~~~~~~g~~~l~~l-~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i 368 (802)
|+.+ ++.||+.|+++. ++.+ +.|++|||||||+|++ |-++|.... .+..+
T Consensus 111 d~~~--------rf~~fs~a~le~-------------~~~l~~~pDIIH~hDW~tal~-p~~lk~~~~-----~~~~~-- 161 (245)
T PF08323_consen 111 DNAE--------RFAFFSRAALEL-------------LKKLGWKPDIIHCHDWHTALA-PLYLKERYQ-----QDPFF-- 161 (245)
T ss_dssp THHH--------HHHHHHHHHHHH-------------HCTCT-S-SEEEEECGGGTTH-HHHHHHCCS-----S------
T ss_pred hHHH--------HHHHHHHHHHHH-------------HHhhCCCCCEEEecCchHHHH-HHHhccccc-----ccccc--
Confidence 6555 888999999975 4555 6899999999999999 888888643 33444
Q ss_pred cCceEEEeecCCchhhhhhccHHHHHhh-chhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccch
Q 003693 369 TTRTVAYTNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLC 447 (802)
Q Consensus 369 ~~~~~vyTnHT~~~eglE~w~~~l~~~~-Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~la 447 (802)
....++||+||+.+||. ||.+.+..+ || +..+..++..+. ++.+||.+.|
T Consensus 162 ~~~~~v~TIHN~~yqg~--~~~~~~~~~gl~------------------------~~~~~~~~~~~~---~~~in~lk~g 212 (245)
T PF08323_consen 162 ANIPTVFTIHNLEYQGI--FPPEDLKALGLP------------------------DEYFQNLDEYEF---YGQINFLKAG 212 (245)
T ss_dssp --SEEEEEESSTT---E--EEGGGGGCTT-G------------------------GGGS-STTTTEE---TTEEEHHHHH
T ss_pred ccceeEEEEcccccCCc--CCHHHHHHcCCC------------------------HHHhcccccccc---ccccCHHHHH
Confidence 57999999999999999 886655321 33 333323333333 3589999999
Q ss_pred hhcCCchhhhHHHhHHHHHhhhhc-CccccC
Q 003693 448 VVSAHTVNGVAQLHSDILKADLFA-DYVSLW 477 (802)
Q Consensus 448 i~~S~~VNgVS~lH~eilk~~~f~-~~~~l~ 477 (802)
|..|++||+||+.|++++++..|+ ++.+++
T Consensus 213 i~~AD~v~TVS~~Ya~Ei~~~~~g~GL~~~l 243 (245)
T PF08323_consen 213 IVYADKVTTVSPTYAREIQTPEFGEGLEGLL 243 (245)
T ss_dssp HHHSSEEEESSHHHHHHTTSHHHHTT-HHHH
T ss_pred HHhcCEeeeCCHHHHHHHhCcccCCChHHHh
Confidence 999999999999999999998877 665543
No 19
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.39 E-value=6.4e-12 Score=145.27 Aligned_cols=226 Identities=18% Similarity=0.207 Sum_probs=154.5
Q ss_pred ccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHhcCccccccCch
Q 003693 440 VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 519 (802)
Q Consensus 440 ~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~ 519 (802)
+..|=..+...|+.+.+||+.-+++++. +.+.-|++ =|-|||++..|- .
T Consensus 216 r~~iE~~aa~~Ad~fttVS~it~~E~~~-----Ll~~~pd~--ViPNGid~~~f~-----~------------------- 264 (590)
T cd03793 216 RYCIERAAAHCAHVFTTVSEITAYEAEH-----LLKRKPDV--VLPNGLNVKKFS-----A------------------- 264 (590)
T ss_pred HHHHHHHHHhhCCEEEECChHHHHHHHH-----HhCCCCCE--EeCCCcchhhcc-----c-------------------
Confidence 3445668899999999999998888873 34555776 445999999882 1
Q ss_pred hHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CCCCCCcceeec-cccchh-hhhhhhhhhhHHHHHHHHHh
Q 003693 520 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-G-VTIDPNSLFDIQ-VKRIHE-YKRQLLNILGAIYRYKKLKE 595 (802)
Q Consensus 520 ~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~-g-~~vdp~~lfd~~-vkR~he-YKRq~Lnil~ii~~y~~i~~ 595 (802)
..+ +...|...|+++.++++..+ | ..+||+..+..+ +.|+.- .|+.++ ++..+.|+.+...
T Consensus 265 --------~~e------~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDv-lIeAl~rLn~~l~ 329 (590)
T cd03793 265 --------LHE------FQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADM-FLEALARLNYLLK 329 (590)
T ss_pred --------chh------hhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHH-HHHHHHHHHHHHH
Confidence 111 45788899999999875432 2 247788888887 799987 899999 9999999986443
Q ss_pred cCcccccCCCCeEE-EEEecCC-------CCCHHHHHHHHHHHHHHHHhcCC----------------------------
Q 003693 596 MSPQERKKTTPRTI-MIGGKAF-------ATYTNAKRIVKLVNDVGEVVNTD---------------------------- 639 (802)
Q Consensus 596 ~~~~~~~~~~P~~f-If~GKA~-------P~y~~aK~iIk~I~~va~~in~d---------------------------- 639 (802)
.... +.+=+.| ||-+|.. -|...-|++-.-+.++.++|.+.
T Consensus 330 -~~~~--~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~ 406 (590)
T cd03793 330 -VEGS--DTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRR 406 (590)
T ss_pred -hcCC--CCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHH
Confidence 2111 2222333 3555432 23344455555555554444332
Q ss_pred ----------c----------------------CC---CCcceEEEEcCC--------ChhHHhhhcccccccccCCCCC
Q 003693 640 ----------P----------------------EV---NSYLKVVFVPNY--------NVSVAELLIPGSELSQHISTAG 676 (802)
Q Consensus 640 ----------p----------------------~~---~~~lkVvFl~nY--------~vslA~~iipgaDv~l~iS~a~ 676 (802)
| .+ .++.||+|.|.| +++ -+.++.|||++..||.
T Consensus 407 ~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~-y~E~~~g~dl~v~PS~-- 483 (590)
T cd03793 407 IFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLD-YEEFVRGCHLGVFPSY-- 483 (590)
T ss_pred HHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcc-hHHHhhhceEEEeccc--
Confidence 1 12 468999999988 443 3456899999999999
Q ss_pred ccCCCcccchhhccCceEEEeecC----ccccccccccCcceeec
Q 003693 677 MEASGTSNMKFSLNGCLIIGTLDG----ANVEIRQEIGEENFFLF 717 (802)
Q Consensus 677 ~EASGTs~MKa~lNGal~i~tlDG----anvEi~e~~g~~n~fiF 717 (802)
+|+.|.--+-||.-|++.|+|-.+ +..|+....+...+++.
T Consensus 484 yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~ 528 (590)
T cd03793 484 YEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIV 528 (590)
T ss_pred cCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEe
Confidence 999999999999999999999775 33333322212356666
No 20
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.29 E-value=2.8e-11 Score=145.01 Aligned_cols=190 Identities=15% Similarity=0.098 Sum_probs=128.6
Q ss_pred HhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEe-cCCC---CCHHHHHHHHHHH
Q 003693 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGG-KAFA---TYTNAKRIVKLVN 630 (802)
Q Consensus 555 ~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~G-KA~P---~y~~aK~iIk~I~ 630 (802)
.+|...+|+.++++++.|+...|+.+. ++..+.+..++.. ..++|+.| ...+ .+...+..++.+.
T Consensus 541 ~~G~l~d~~kpiIl~VGRL~~~KGid~-LIeA~~~l~~l~~----------~~~LVIVGGg~~~~~s~d~ee~~~i~~L~ 609 (784)
T TIGR02470 541 HYGYLKDPNKPIIFSMARLDRVKNLTG-LVECYGRSPKLRE----------LVNLVVVAGKLDAKESKDREEQAEIEKMH 609 (784)
T ss_pred HhCCCCCCCCcEEEEEeCCCccCCHHH-HHHHHHHhHhhCC----------CeEEEEEeCCcccccccchhHHHHHHHHH
Confidence 678877899999999999999999998 8777665544321 34555544 3331 3444556677777
Q ss_pred HHHHHhcCCcCCCCcceEEEEcCC--Ch---hHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccc
Q 003693 631 DVGEVVNTDPEVNSYLKVVFVPNY--NV---SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (802)
Q Consensus 631 ~va~~in~dp~~~~~lkVvFl~nY--~v---slA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi 705 (802)
++++.+ .+.+ +|.|+--- .. .+.+.+-.++|++.+||+ +|++|...+-||..|.++|+|..|-..|+
T Consensus 610 ~la~~~----gL~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~Ei 681 (784)
T TIGR02470 610 NLIDQY----QLHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLEI 681 (784)
T ss_pred HHHHHh----CCCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 777655 3567 77775421 12 233334446899999999 99999999999999999999999988776
Q ss_pred cccccCcceeeccccc-chHHHHhhhccCC-CC-CCChHHHHHHHHHH---cCCCCCCChHHHHHHHh
Q 003693 706 RQEIGEENFFLFGAVA-EQVPKLRKEREDG-LF-KPDPRFEEAKQFIR---SGAFGSYDYNPLLDSLE 767 (802)
Q Consensus 706 ~e~~g~~n~fiFg~~~-~ev~~~~~~~~~~-~~-~~~~~l~~v~~~m~---~g~fs~~~f~~ly~~l~ 767 (802)
.++ ..|||++.... +++..... .... .. ++..|.++..+++. +. |||..+.+=+-.+.
T Consensus 682 V~d--g~tGfLVdp~D~eaLA~aL~-~ll~kll~dp~~~~~ms~~a~~rV~~~-FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 682 IQD--GVSGFHIDPYHGEEAAEKIV-DFFEKCDEDPSYWQKISQGGLQRIYEK-YTWKIYSERLLTLA 745 (784)
T ss_pred hcC--CCcEEEeCCCCHHHHHHHHH-HHHHHhcCCHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHH
Confidence 654 36999998755 66666552 2111 12 33445555656554 44 99986544444443
No 21
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.22 E-value=9.3e-11 Score=128.20 Aligned_cols=236 Identities=16% Similarity=0.140 Sum_probs=150.2
Q ss_pred cchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhh
Q 003693 445 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (802)
Q Consensus 445 ~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l 524 (802)
..++..++.|.+||+-..+.++.. |+ .+-+.++.-|-|||+...|- |.-
T Consensus 139 ~~~~~~ad~vi~~S~~~~~~~~~~-~~---~~~~~~i~vi~ng~~~~~~~----~~~----------------------- 187 (388)
T TIGR02149 139 KTAIEAADRVIAVSGGMREDILKY-YP---DLDPEKVHVIYNGIDTKEYK----PDD----------------------- 187 (388)
T ss_pred HHHHhhCCEEEEccHHHHHHHHHH-cC---CCCcceEEEecCCCChhhcC----CCc-----------------------
Confidence 345567888899998766655532 21 23356788889999988772 110
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCC
Q 003693 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKT 604 (802)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~ 604 (802)
. ..+ +.++|+ +++.+.++++.|+..+|+.++ ++..+.++. .
T Consensus 188 -----~---------------~~~----~~~~~~--~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l~---~--------- 228 (388)
T TIGR02149 188 -----G---------------NVV----LDRYGI--DRSRPYILFVGRITRQKGVPH-LLDAVHYIP---K--------- 228 (388)
T ss_pred -----h---------------HHH----HHHhCC--CCCceEEEEEcccccccCHHH-HHHHHHHHh---h---------
Confidence 0 001 124453 567889999999999999998 887766542 1
Q ss_pred CCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcc
Q 003693 605 TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTS 683 (802)
Q Consensus 605 ~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~n-Y~vslA~~iipgaDv~l~iS~a~~EASGTs 683 (802)
+.++++.|.+........++.+++..+... .+ +|+|+.. ++.+-...++.+||+.+.+|. .|+.|++
T Consensus 229 -~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~-------~~--~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~~ 296 (388)
T TIGR02149 229 -DVQVVLCAGAPDTPEVAEEVRQAVALLDRN-------RT--GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGIV 296 (388)
T ss_pred -cCcEEEEeCCCCcHHHHHHHHHHHHHhccc-------cC--ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCChH
Confidence 346777665544333333444444433310 12 4777765 566667888999999999999 8999999
Q ss_pred cchhhccCceEEEeecCccccccccccCcceeeccccc-------chHHHHhhhccCCCCCCChHHHHHHHHHH--cCCC
Q 003693 684 NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA-------EQVPKLRKEREDGLFKPDPRFEEAKQFIR--SGAF 754 (802)
Q Consensus 684 ~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~-------~ev~~~~~~~~~~~~~~~~~l~~v~~~m~--~g~f 754 (802)
.|-+|..|.+.|+|-.|...|+.+. ..+|++|.... +++.+...+- .+ ++..+.++..++.+ ...|
T Consensus 297 ~lEA~a~G~PvI~s~~~~~~e~i~~--~~~G~~~~~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~a~~~~~~~~ 371 (388)
T TIGR02149 297 NLEAMACGTPVVASATGGIPEVVVD--GETGFLVPPDNSDADGFQAELAKAINIL-LA--DPELAKKMGIAGRKRAEEEF 371 (388)
T ss_pred HHHHHHcCCCEEEeCCCCHHHHhhC--CCceEEcCCCCCcccchHHHHHHHHHHH-Hh--CHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999988887766553 35788986543 3454444211 11 11112222333332 2249
Q ss_pred CCCC----hHHHHHHHh
Q 003693 755 GSYD----YNPLLDSLE 767 (802)
Q Consensus 755 s~~~----f~~ly~~l~ 767 (802)
+|+. |.++|++++
T Consensus 372 s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 372 SWGSIAKKTVEMYRKVL 388 (388)
T ss_pred CHHHHHHHHHHHHHhhC
Confidence 9984 777887653
No 22
>PLN00142 sucrose synthase
Probab=99.18 E-value=2.3e-10 Score=137.44 Aligned_cols=191 Identities=12% Similarity=0.050 Sum_probs=127.9
Q ss_pred HhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecC-CCC---CHHHHHHHHHHH
Q 003693 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FAT---YTNAKRIVKLVN 630 (802)
Q Consensus 555 ~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA-~P~---y~~aK~iIk~I~ 630 (802)
..|..-+++.++++++.|+..+|+.+. ++..+.++.++. ....+++.|.+ .|. +...+..++.+.
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~-LIeA~a~l~~l~----------~~~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTG-LVEWYGKNKRLR----------ELVNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHH-HHHHHHHHHHhC----------CCcEEEEEECCccccccccHHHHHHHHHHH
Confidence 567666788999999999999999998 888776654421 13567776655 442 233334455566
Q ss_pred HHHHHhcCCcCCCCcceEEEEcC---C--ChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccc
Q 003693 631 DVGEVVNTDPEVNSYLKVVFVPN---Y--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (802)
Q Consensus 631 ~va~~in~dp~~~~~lkVvFl~n---Y--~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi 705 (802)
++++.+ .+.+ +|.|+.. + +-.+.+.+..++|++.+||+ +|++|..-+-||..|.+.|+|-.|-..|+
T Consensus 633 ~La~~l----gL~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EI 704 (815)
T PLN00142 633 SLIEKY----NLKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEI 704 (815)
T ss_pred HHHHHc----CCCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 666543 4567 7887642 2 23455555557899999999 99999999999999999999999988776
Q ss_pred cccccCcceeeccccc-chHHHHhhhccCC-CC-CCChHHHHHHHHHHc--CCCCCCChHHHHHHHh
Q 003693 706 RQEIGEENFFLFGAVA-EQVPKLRKEREDG-LF-KPDPRFEEAKQFIRS--GAFGSYDYNPLLDSLE 767 (802)
Q Consensus 706 ~e~~g~~n~fiFg~~~-~ev~~~~~~~~~~-~~-~~~~~l~~v~~~m~~--g~fs~~~f~~ly~~l~ 767 (802)
.++ ..|||++.... +++...... ... .. +++.|.++..+++.. ..|||..+.+=+-.+.
T Consensus 705 V~d--G~tG~LV~P~D~eaLA~aI~~-lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 705 IVD--GVSGFHIDPYHGDEAANKIAD-FFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred hcC--CCcEEEeCCCCHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 654 37999998654 665554421 111 12 333455555555442 2499986444444443
No 23
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.08 E-value=9.8e-10 Score=124.52 Aligned_cols=182 Identities=14% Similarity=0.075 Sum_probs=114.2
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCH---HHHHHHHHHHHHHHHhc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT---NAKRIVKLVNDVGEVVN 637 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~---~aK~iIk~I~~va~~in 637 (802)
+|+..+++++.|+++.|++++ ++..+.++..++. .|..++++|.+..... ..++..+.+..+++.+
T Consensus 245 ~~~~~~i~~vGrl~~~Kg~~~-li~A~~~l~~~~~---------~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~- 313 (439)
T TIGR02472 245 DPEKPPILAISRPDRRKNIPS-LVEAYGRSPKLQE---------MANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRY- 313 (439)
T ss_pred ccCCcEEEEEcCCcccCCHHH-HHHHHHhChhhhh---------hccEEEEeCCccccccccHHHHHHHHHHHHHHHHc-
Confidence 467789999999999999999 8888776543322 1333446676543222 2223333444444433
Q ss_pred CCcCCCCcceEEEEcCCChhHHhhhcccc----cccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcc
Q 003693 638 TDPEVNSYLKVVFVPNYNVSVAELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEEN 713 (802)
Q Consensus 638 ~dp~~~~~lkVvFl~nY~vslA~~iipga----Dv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n 713 (802)
.+.+ +|.|+....-+--..++++| |++..+|+ .|+.|..-+-||..|.+.|+|..|...|+.++ .+|
T Consensus 314 ---~l~~--~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~--~~~ 384 (439)
T TIGR02472 314 ---DLYG--KVAYPKHHRPDDVPELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIAN--CRN 384 (439)
T ss_pred ---CCCc--eEEecCCCCHHHHHHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC--CCc
Confidence 3567 78777654444344555554 99999999 89999999999999999999999987776643 368
Q ss_pred eeeccccc-chHHHHhhhccCCCCCCChHHHH---HHHHHHcCCCCCCChHHHHHHH
Q 003693 714 FFLFGAVA-EQVPKLRKEREDGLFKPDPRFEE---AKQFIRSGAFGSYDYNPLLDSL 766 (802)
Q Consensus 714 ~fiFg~~~-~ev~~~~~~~~~~~~~~~~~l~~---v~~~m~~g~fs~~~f~~ly~~l 766 (802)
||++.... +++...+..- .+ ++..+.++ .++.+.+. |||+...+-|..+
T Consensus 385 G~lv~~~d~~~la~~i~~l-l~--~~~~~~~~~~~a~~~~~~~-fsw~~~~~~~~~l 437 (439)
T TIGR02472 385 GLLVDVLDLEAIASALEDA-LS--DSSQWQLWSRNGIEGVRRH-YSWDAHVEKYLRI 437 (439)
T ss_pred EEEeCCCCHHHHHHHHHHH-Hh--CHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHH
Confidence 99996544 5665554221 11 11112222 33334444 9998644444444
No 24
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.04 E-value=2.7e-09 Score=118.74 Aligned_cols=191 Identities=13% Similarity=0.109 Sum_probs=129.5
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
+++...++++.|+...|++++ ++..+..+.+ . + .+.+++++|.+. .... +-+++...
T Consensus 190 ~~~~~~i~~~grl~~~Kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~g~-~~~~---l~~~~~~~-------- 246 (398)
T cd03796 190 DNDKITIVVISRLVYRKGIDL-LVGIIPEICK--K-H-------PNVRFIIGGDGP-KRIL---LEEMREKY-------- 246 (398)
T ss_pred CCCceEEEEEeccchhcCHHH-HHHHHHHHHh--h-C-------CCEEEEEEeCCc-hHHH---HHHHHHHh--------
Confidence 357788999999999999999 8888766543 2 2 257999999763 2211 22222221
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
.+.+ +|.|+...+-+-...++++||+.+.+|. .|..|.+-+-||..|.+.|+|..|..-|+.++ +.+++....
T Consensus 247 ~l~~--~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~---~~~~~~~~~ 319 (398)
T cd03796 247 NLQD--RVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLPP---DMILLAEPD 319 (398)
T ss_pred CCCC--eEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhheeC---CceeecCCC
Confidence 3355 7888866666677778899999999998 89999999999999999999998987776653 334444444
Q ss_pred cchHHHHhhhccCCCC-CCChHHHHHHHHHHcCCCCCCC----hHHHHHHHhhCCCCCCCCcccccCCcHHHHH
Q 003693 721 AEQVPKLRKEREDGLF-KPDPRFEEAKQFIRSGAFGSYD----YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLE 789 (802)
Q Consensus 721 ~~ev~~~~~~~~~~~~-~~~~~l~~v~~~m~~g~fs~~~----f~~ly~~l~~~~~~~~~D~y~~~~Df~~y~~ 789 (802)
.+++.+... ...+.. ......+.....+.+. |||+. |.++|++++.. ...=+ |-|+..|..
T Consensus 320 ~~~l~~~l~-~~l~~~~~~~~~~~~~~~~~~~~-fs~~~~~~~~~~~y~~l~~~-----~~~~~-~~~~~~~~~ 385 (398)
T cd03796 320 VESIVRKLE-EAISILRTGKHDPWSFHNRVKKM-YSWEDVAKRTEKVYDRILQT-----PNLSL-LERLKRYYS 385 (398)
T ss_pred HHHHHHHHH-HHHhChhhhhhHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHhcC-----CCcch-HHhhhhhcc
Confidence 466655552 222221 1111234455556666 99994 99999999864 23333 666666654
No 25
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.03 E-value=4.6e-09 Score=116.28 Aligned_cols=235 Identities=14% Similarity=0.130 Sum_probs=149.9
Q ss_pred hhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhhhcc
Q 003693 448 VVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQF 527 (802)
Q Consensus 448 i~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~ 527 (802)
+..++.|-.+|+-..+.+... +..-++++.-|.|||+...|- |.
T Consensus 161 ~~~~d~vi~~s~~~~~~~~~~-----~~~~~~ki~vi~ngvd~~~~~----~~--------------------------- 204 (405)
T TIGR03449 161 VDNADRLIANTDEEARDLVRH-----YDADPDRIDVVAPGADLERFR----PG--------------------------- 204 (405)
T ss_pred HHhcCeEEECCHHHHHHHHHH-----cCCChhhEEEECCCcCHHHcC----CC---------------------------
Confidence 445677777787666655422 233457788889999987772 10
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCe
Q 003693 528 ADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPR 607 (802)
Q Consensus 528 ~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~ 607 (802)
+. - .. +++.|+ +++.+.++++.|+..+|+.++ ++..+.++.+ . .|+ ...
T Consensus 205 -~~------~-~~------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~-li~a~~~l~~--~-~~~-----~~~ 253 (405)
T TIGR03449 205 -DR------A-TE------------RARLGL--PLDTKVVAFVGRIQPLKAPDV-LLRAVAELLD--R-DPD-----RNL 253 (405)
T ss_pred -cH------H-HH------------HHhcCC--CCCCcEEEEecCCCcccCHHH-HHHHHHHHHh--h-CCC-----cce
Confidence 00 0 00 113453 467788999999999999998 8888877643 3 222 137
Q ss_pred EEEEEecCCC-CCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccch
Q 003693 608 TIMIGGKAFA-TYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (802)
Q Consensus 608 ~fIf~GKA~P-~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MK 686 (802)
++++.|.+.+ ++..-.++.+++... .+.+ +|.|+..-.-+-...++++||+..++|+ .|..|+.-+-
T Consensus 254 ~l~ivG~~~~~g~~~~~~l~~~~~~~--------~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~lE 321 (405)
T TIGR03449 254 RVIVVGGPSGSGLATPDALIELAAEL--------GIAD--RVRFLPPRPPEELVHVYRAADVVAVPSY--NESFGLVAME 321 (405)
T ss_pred EEEEEeCCCCCcchHHHHHHHHHHHc--------CCCc--eEEECCCCCHHHHHHHHHhCCEEEECCC--CCCcChHHHH
Confidence 8888886543 322223333333222 2345 6777765444555678999999999999 8999999999
Q ss_pred hhccCceEEEeecCccccccccccCcceeeccc-ccchHHHHhhhccCCCCCCChHHHHHHHH--HHcCCCCCCC----h
Q 003693 687 FSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA-VAEQVPKLRKEREDGLFKPDPRFEEAKQF--IRSGAFGSYD----Y 759 (802)
Q Consensus 687 a~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~-~~~ev~~~~~~~~~~~~~~~~~l~~v~~~--m~~g~fs~~~----f 759 (802)
+|..|.+.|+|-.|...|+.++ ..+++++.. ..+++.+...+ ..+ ++..+.++..++ ..+. |||+. |
T Consensus 322 Ama~G~Pvi~~~~~~~~e~i~~--~~~g~~~~~~d~~~la~~i~~-~l~--~~~~~~~~~~~~~~~~~~-fsw~~~~~~~ 395 (405)
T TIGR03449 322 AQACGTPVVAARVGGLPVAVAD--GETGLLVDGHDPADWADALAR-LLD--DPRTRIRMGAAAVEHAAG-FSWAATADGL 395 (405)
T ss_pred HHHcCCCEEEecCCCcHhhhcc--CCceEECCCCCHHHHHHHHHH-HHh--CHHHHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence 9999999999999987766543 368899875 44666665522 111 111111221111 1233 99984 8
Q ss_pred HHHHHHHh
Q 003693 760 NPLLDSLE 767 (802)
Q Consensus 760 ~~ly~~l~ 767 (802)
.++|..++
T Consensus 396 ~~~y~~~~ 403 (405)
T TIGR03449 396 LSSYRDAL 403 (405)
T ss_pred HHHHHHHh
Confidence 88888765
No 26
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.95 E-value=3.7e-09 Score=129.63 Aligned_cols=183 Identities=13% Similarity=0.122 Sum_probs=116.9
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHH---HHHHHHHHHHHHHHhc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTN---AKRIVKLVNDVGEVVN 637 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~---aK~iIk~I~~va~~in 637 (802)
+|+.+++.+|.|+...|+++. ++..+.++..+.. . ...++| +|.+.....+ .....+.+..+++.+
T Consensus 476 ~pdkpvIL~VGRL~p~KGi~~-LIeAf~~L~~l~~-~-------~nL~LI-iG~gdd~d~l~~~~~~~l~~L~~li~~l- 544 (1050)
T TIGR02468 476 NPRKPMILALARPDPKKNITT-LVKAFGECRPLRE-L-------ANLTLI-MGNRDDIDEMSSGSSSVLTSVLKLIDKY- 544 (1050)
T ss_pred cCCCcEEEEEcCCccccCHHH-HHHHHHHhHhhcc-C-------CCEEEE-EecCchhhhhhccchHHHHHHHHHHHHh-
Confidence 588999999999999999999 8888877654322 1 134444 4543322221 112223344444333
Q ss_pred CCcCCCCcceEEEEcCCC-hhHHhhhcccc----cccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCc
Q 003693 638 TDPEVNSYLKVVFVPNYN-VSVAELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 712 (802)
Q Consensus 638 ~dp~~~~~lkVvFl~nY~-vslA~~iipga----Dv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~ 712 (802)
.+.+ +|.|+.--. -.++ .++.+| |++.+||+ +|+-|..-+=||..|.+.|+|-.|...|+.+. ..
T Consensus 545 ---gL~g--~V~FlG~v~~edvp-~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~--g~ 614 (1050)
T TIGR02468 545 ---DLYG--QVAYPKHHKQSDVP-DIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHRV--LD 614 (1050)
T ss_pred ---CCCC--eEEecCCCCHHHHH-HHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhcc--CC
Confidence 3567 677754322 3344 445544 79999999 99999999999999999999999988777654 37
Q ss_pred ceeeccccc-chHHHHhhhccCCCCCCChHHHHHHHHHH--cCCCCCCC----hHHHHHHHhh
Q 003693 713 NFFLFGAVA-EQVPKLRKEREDGLFKPDPRFEEAKQFIR--SGAFGSYD----YNPLLDSLEG 768 (802)
Q Consensus 713 n~fiFg~~~-~ev~~~~~~~~~~~~~~~~~l~~v~~~m~--~g~fs~~~----f~~ly~~l~~ 768 (802)
||++|.... +++...+. .-+. ++..|.++..++.. . .|+|.. |..++..++.
T Consensus 615 nGlLVdP~D~eaLA~AL~-~LL~--Dpelr~~m~~~gr~~v~-~FSWe~ia~~yl~~i~~~~~ 673 (1050)
T TIGR02468 615 NGLLVDPHDQQAIADALL-KLVA--DKQLWAECRQNGLKNIH-LFSWPEHCKTYLSRIASCRP 673 (1050)
T ss_pred cEEEECCCCHHHHHHHHH-HHhh--CHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHhc
Confidence 999997644 66665552 2111 21223333333221 2 499994 7777777754
No 27
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.86 E-value=2.7e-08 Score=114.11 Aligned_cols=196 Identities=16% Similarity=0.136 Sum_probs=136.8
Q ss_pred ccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHhcCccccccCchhH
Q 003693 442 RMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLL 521 (802)
Q Consensus 442 ~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l 521 (802)
.+...++..|+.|..||+-..+.++.. ..-|+|+.-|-|||+..++- |.
T Consensus 236 ~l~~~~~~~ad~Ii~~s~~~~~~~~~~------g~~~~ki~vIpNgid~~~f~----~~--------------------- 284 (475)
T cd03813 236 SLGRLAYQAADRITTLYEGNRERQIED------GADPEKIRVIPNGIDPERFA----PA--------------------- 284 (475)
T ss_pred HHHHHHHHhCCEEEecCHHHHHHHHHc------CCCHHHeEEeCCCcCHHHcC----Cc---------------------
Confidence 345566778888999998766554421 23367888889999876651 10
Q ss_pred HhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccc
Q 003693 522 VGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQER 601 (802)
Q Consensus 522 ~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~ 601 (802)
.. . ..+++.+.++++.|+...|+.+. ++..+..+.+ . .
T Consensus 285 -------~~--------~-------------------~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-~---- 322 (475)
T cd03813 285 -------RR--------A-------------------RPEKEPPVVGLIGRVVPIKDIKT-FIRAAAIVRK--K-I---- 322 (475)
T ss_pred -------cc--------c-------------------ccCCCCcEEEEEeccccccCHHH-HHHHHHHHHH--h-C----
Confidence 00 0 02356789999999999999999 8888776644 2 1
Q ss_pred cCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCC
Q 003693 602 KKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG 681 (802)
Q Consensus 602 ~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASG 681 (802)
...++++.|.+.......+++-+++.++. +.+ +|.|+. ...+. .++++||+...+|. .|+.|
T Consensus 323 ---p~~~l~IvG~g~~~~~~~~e~~~li~~l~--------l~~--~V~f~G--~~~v~-~~l~~aDv~vlpS~--~Eg~p 384 (475)
T cd03813 323 ---PDAEGWVIGPTDEDPEYAEECRELVESLG--------LED--NVKFTG--FQNVK-EYLPKLDVLVLTSI--SEGQP 384 (475)
T ss_pred ---CCeEEEEECCCCcChHHHHHHHHHHHHhC--------CCC--eEEEcC--CccHH-HHHHhCCEEEeCch--hhcCC
Confidence 24789999987543333344444443332 345 788887 34444 56799999999999 89999
Q ss_pred cccchhhccCceEEEeecCcccccccccc----Ccceeeccccc-chHHHHh
Q 003693 682 TSNMKFSLNGCLIIGTLDGANVEIRQEIG----EENFFLFGAVA-EQVPKLR 728 (802)
Q Consensus 682 Ts~MKa~lNGal~i~tlDGanvEi~e~~g----~~n~fiFg~~~-~ev~~~~ 728 (802)
+.-+=+|..|.+.|+|-.|..-|+.++.+ ..+|+++.... +++.+..
T Consensus 385 ~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai 436 (475)
T cd03813 385 LVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAI 436 (475)
T ss_pred hHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHH
Confidence 99999999999999999998877766532 14788887544 6666655
No 28
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.69 E-value=2.6e-07 Score=99.05 Aligned_cols=145 Identities=18% Similarity=0.178 Sum_probs=104.7
Q ss_pred HhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 003693 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (802)
Q Consensus 555 ~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~ 634 (802)
+.+ ..++.+.++++.|+...|+++. ++..+..+... + .+.++++.|.+.+.....+.+.+++.+..
T Consensus 178 ~~~--~~~~~~~i~~~Gr~~~~Kg~~~-li~~~~~l~~~---~-------~~~~l~ivG~~~~~~~~~~~~~~~~~~~~- 243 (355)
T cd03819 178 EWP--LPKGKPVILLPGRLTRWKGQEV-FIEALARLKKD---D-------PDVHLLIVGDAQGRRFYYAELLELIKRLG- 243 (355)
T ss_pred HcC--CCCCceEEEEeeccccccCHHH-HHHHHHHHHhc---C-------CCeEEEEEECCcccchHHHHHHHHHHHcC-
Confidence 444 3467788999999999999999 88877776441 1 26899999998776554444444443332
Q ss_pred HhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCC-CCCccCCCcccchhhccCceEEEeecCccccccccccCcc
Q 003693 635 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIS-TAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEEN 713 (802)
Q Consensus 635 ~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS-~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n 713 (802)
+.+ +|.|+.. .-.+ ..++.+||+...+| . .|..|++-+=||..|.+.|+|-.|...|+..+. .+
T Consensus 244 -------~~~--~v~~~g~-~~~~-~~~l~~ad~~i~ps~~--~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~--~~ 308 (355)
T cd03819 244 -------LQD--RVTFVGH-CSDM-PAAYALADIVVSASTE--PEAFGRTAVEAQAMGRPVIASDHGGARETVRPG--ET 308 (355)
T ss_pred -------Ccc--eEEEcCC-cccH-HHHHHhCCEEEecCCC--CCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCC--Cc
Confidence 234 5666655 3334 46688999999999 5 799999999999999999999888877665542 37
Q ss_pred eeeccccc-chHHHHh
Q 003693 714 FFLFGAVA-EQVPKLR 728 (802)
Q Consensus 714 ~fiFg~~~-~ev~~~~ 728 (802)
++++.... +++....
T Consensus 309 g~~~~~~~~~~l~~~i 324 (355)
T cd03819 309 GLLVPPGDAEALAQAL 324 (355)
T ss_pred eEEeCCCCHHHHHHHH
Confidence 88886544 6666665
No 29
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.67 E-value=2.7e-07 Score=99.95 Aligned_cols=137 Identities=16% Similarity=0.191 Sum_probs=97.6
Q ss_pred CCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 003693 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (802)
Q Consensus 560 vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~d 639 (802)
+.++....+++.|+..+|+.+. ++..+.++.+ . .|.++++.|.+. .. +.+. +.++..
T Consensus 193 ~~~~~~~il~~g~l~~~K~~~~-li~a~~~l~~--~---------~~~~l~i~G~g~-~~---~~~~----~~~~~~--- 249 (371)
T cd04962 193 APEGEKVLIHISNFRPVKRIDD-VIRIFAKVRK--E---------VPARLLLVGDGP-ER---SPAE----RLAREL--- 249 (371)
T ss_pred CCCCCeEEEEecccccccCHHH-HHHHHHHHHh--c---------CCceEEEEcCCc-CH---HHHH----HHHHHc---
Confidence 3467788999999999999998 8877666532 1 267899999773 22 2222 222222
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccc
Q 003693 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (802)
Q Consensus 640 p~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~ 719 (802)
.+.+ +|.|+.. .-. ...++.+||+..++|+ .|+.|.+-+-+|..|.+.|+|-.|..-|+.++ ..+||+|..
T Consensus 250 -~~~~--~v~~~g~-~~~-~~~~~~~~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~--~~~G~~~~~ 320 (371)
T cd04962 250 -GLQD--DVLFLGK-QDH-VEELLSIADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPEVVKH--GETGFLVDV 320 (371)
T ss_pred -CCCc--eEEEecC-ccc-HHHHHHhcCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchhhhcC--CCceEEcCC
Confidence 2345 6777763 334 4567899999999998 99999999999999999999988876555443 258899876
Q ss_pred cc-chHHHHh
Q 003693 720 VA-EQVPKLR 728 (802)
Q Consensus 720 ~~-~ev~~~~ 728 (802)
.. +++....
T Consensus 321 ~~~~~l~~~i 330 (371)
T cd04962 321 GDVEAMAEYA 330 (371)
T ss_pred CCHHHHHHHH
Confidence 43 6666555
No 30
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.65 E-value=4.4e-07 Score=95.68 Aligned_cols=140 Identities=13% Similarity=0.098 Sum_probs=106.3
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
.++.+.++++.|+.+.|+.++ ++.++.++.+ . . .+.++++.|++.+.+.. .+..+++..
T Consensus 200 ~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~i~G~~~~~~~~------~~~~~~~~~---- 258 (375)
T cd03821 200 LPDKRIILFLGRLHPKKGLDL-LIEAFAKLAE--R-F-------PDWHLVIAGPDEGGYRA------ELKQIAAAL---- 258 (375)
T ss_pred CCCCcEEEEEeCcchhcCHHH-HHHHHHHhhh--h-c-------CCeEEEEECCCCcchHH------HHHHHHHhc----
Confidence 467788999999999999998 8888777654 2 1 25799999998887766 333332222
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
...+ +|.|+....-+--..++..||+..++|+ .|.+|++-+-+|..|.+.|+|-.|...|+... +++++....
T Consensus 259 ~~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~---~~~~~~~~~ 331 (375)
T cd03821 259 GLED--RVTFTGMLYGEDKAAALADADLFVLPSH--SENFGIVVAEALACGTPVVTTDKVPWQELIEY---GCGWVVDDD 331 (375)
T ss_pred Cccc--eEEEcCCCChHHHHHHHhhCCEEEeccc--cCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc---CceEEeCCC
Confidence 2345 6888776665555667888999999999 69999999999999999999988877666554 677887776
Q ss_pred cchHHHHh
Q 003693 721 AEQVPKLR 728 (802)
Q Consensus 721 ~~ev~~~~ 728 (802)
.+++.+..
T Consensus 332 ~~~~~~~i 339 (375)
T cd03821 332 VDALAAAL 339 (375)
T ss_pred hHHHHHHH
Confidence 66776665
No 31
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=98.61 E-value=3.3e-07 Score=105.22 Aligned_cols=152 Identities=13% Similarity=0.049 Sum_probs=102.6
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCCc
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y-~~aK~iIk~I~~va~~in~dp 640 (802)
++..+++++.|++..|+..+ ++..+.++.+ . +|+.+ ..+++++.|.+.-++ ..-+++.+.+.+++..+|..-
T Consensus 262 ~~~~~il~vgRl~~~Kgi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 262 GGRKLIVGVDRLDYSKGIPE-RLLAFERLLE--R-YPEWR---GKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred CCCEEEEEecCccccCCHHH-HHHHHHHHHH--h-Chhhc---CCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhcc
Confidence 56788999999999999999 8888887754 3 34321 135677666544232 223456667777777675311
Q ss_pred CCCCcceEEEEcCC-ChhHHhhhcccccccccCCCCCccCCCcccchhhccCce-----EEEeecCccccccccccCcce
Q 003693 641 EVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL-----IIGTLDGANVEIRQEIGEENF 714 (802)
Q Consensus 641 ~~~~~lkVvFl~nY-~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal-----~i~tlDGanvEi~e~~g~~n~ 714 (802)
...+.-.|+|+..+ +-+--..++++||+...+|+ .|.-|+.-+-||.-|.+ .+++..|+..+ ..++
T Consensus 335 g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~--~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~------~~~g 406 (460)
T cd03788 335 GTLDWTPVRYLYRSLPREELAALYRAADVALVTPL--RDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE------LSGA 406 (460)
T ss_pred CCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCcc--ccccCcccceeEEEecCCCceEEEeccccchhh------cCCC
Confidence 11112247777653 55566678899999999999 89999999999999986 44444554322 2578
Q ss_pred eeccccc-chHHHHh
Q 003693 715 FLFGAVA-EQVPKLR 728 (802)
Q Consensus 715 fiFg~~~-~ev~~~~ 728 (802)
+++.... +++.+.+
T Consensus 407 ~lv~p~d~~~la~ai 421 (460)
T cd03788 407 LLVNPYDIDEVADAI 421 (460)
T ss_pred EEECCCCHHHHHHHH
Confidence 8887644 6776665
No 32
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.55 E-value=1.1e-06 Score=93.50 Aligned_cols=141 Identities=11% Similarity=0.049 Sum_probs=101.0
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHH-HHHHHHHHHHhcCCc
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI-VKLVNDVGEVVNTDP 640 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~i-Ik~I~~va~~in~dp 640 (802)
++...++++.|++++|+.++ ++..+..+.+ . + .+.++++.|.+.+....-+.. .++|.. .
T Consensus 183 ~~~~~i~~~G~~~~~K~~~~-ll~a~~~~~~--~-~-------~~~~l~i~G~~~~~~~~~~~~~~~~i~~--------~ 243 (366)
T cd03822 183 DGRPVLLTFGLLRPYKGLEL-LLEALPLLVA--K-H-------PDVRLLVAGETHPDLERYRGEAYALAER--------L 243 (366)
T ss_pred CCCeEEEEEeeccCCCCHHH-HHHHHHHHHh--h-C-------CCeEEEEeccCccchhhhhhhhHhHHHh--------c
Confidence 56788899999999999998 8888877654 2 2 257999999988766542211 011222 2
Q ss_pred CCCCcceEEEEcC-CChhHHhhhcccccccccCCCCCcc--CCCcccchhhccCceEEEeecCccccccccccCcceeec
Q 003693 641 EVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGME--ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (802)
Q Consensus 641 ~~~~~lkVvFl~n-Y~vslA~~iipgaDv~l~iS~a~~E--ASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiF 717 (802)
.+.+ +|.|+.. ..-+-...+++.||+..++|+ .| ..|..-+-||..|.+.|+|-.|. .+... ..+++++|
T Consensus 244 ~~~~--~v~~~~~~~~~~~~~~~~~~ad~~v~ps~--~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~--~~~~g~~~ 316 (366)
T cd03822 244 GLAD--RVIFINRYLPDEELPELFSAADVVVLPYR--SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVL--DGGTGLLV 316 (366)
T ss_pred CCCC--cEEEecCcCCHHHHHHHHhhcCEEEeccc--ccccccchHHHHHHHcCCCEEecCCCC-hheee--eCCCcEEE
Confidence 3355 7999988 555566778899999999999 88 55555667899999999998887 43332 24688888
Q ss_pred cccc-chHHHHh
Q 003693 718 GAVA-EQVPKLR 728 (802)
Q Consensus 718 g~~~-~ev~~~~ 728 (802)
.... +++.+..
T Consensus 317 ~~~d~~~~~~~l 328 (366)
T cd03822 317 PPGDPAALAEAI 328 (366)
T ss_pred cCCCHHHHHHHH
Confidence 7654 7777666
No 33
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.54 E-value=2.5e-06 Score=95.27 Aligned_cols=235 Identities=11% Similarity=0.061 Sum_probs=142.5
Q ss_pred chhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhhh
Q 003693 446 LCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLR 525 (802)
Q Consensus 446 lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~ 525 (802)
.++..++.|..||+--.+.+++. .+-+.++.-|.|||+..++. |.
T Consensus 167 ~~~~~ad~ii~~S~~~~~~~~~~------~~~~~~i~vi~ngvd~~~~~----~~------------------------- 211 (412)
T PRK10307 167 SLLRRFDNVSTISRSMMNKAREK------GVAAEKVIFFPNWSEVARFQ----PV------------------------- 211 (412)
T ss_pred HHHhhCCEEEecCHHHHHHHHHc------CCCcccEEEECCCcCHhhcC----CC-------------------------
Confidence 34556888999999777766532 23356788888999887762 11
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCC
Q 003693 526 QFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTT 605 (802)
Q Consensus 526 ~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~ 605 (802)
.+. .. .. +++++|+ +++.++++++.|+.++|+++. ++..+.++ ++ . .
T Consensus 212 ---~~~-------~~-~~--------~~~~~~~--~~~~~~i~~~G~l~~~kg~~~-li~a~~~l---~~-~-------~ 258 (412)
T PRK10307 212 ---ADA-------DV-DA--------LRAQLGL--PDGKKIVLYSGNIGEKQGLEL-VIDAARRL---RD-R-------P 258 (412)
T ss_pred ---Ccc-------ch-HH--------HHHHcCC--CCCCEEEEEcCccccccCHHH-HHHHHHHh---cc-C-------C
Confidence 000 00 00 1223443 467788999999999999998 88776654 22 1 2
Q ss_pred CeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcc--
Q 003693 606 PRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTS-- 683 (802)
Q Consensus 606 P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs-- 683 (802)
+.+|++.|.+. . . . .+.+.++..+ -+ +|.|+....-+-...++.+||+.+.+|+ .|+.|..
T Consensus 259 ~~~l~ivG~g~-~-~--~----~l~~~~~~~~-----l~--~v~f~G~~~~~~~~~~~~~aDi~v~ps~--~e~~~~~~p 321 (412)
T PRK10307 259 DLIFVICGQGG-G-K--A----RLEKMAQCRG-----LP--NVHFLPLQPYDRLPALLKMADCHLLPQK--AGAADLVLP 321 (412)
T ss_pred CeEEEEECCCh-h-H--H----HHHHHHHHcC-----CC--ceEEeCCCCHHHHHHHHHhcCEeEEeec--cCcccccCc
Confidence 47899999753 1 1 1 2333333221 12 5888865566677788999999999998 6776543
Q ss_pred --cchhhccCceEEEeecCccccccccccCcceeeccccc-chHHHHhhhccCCCCCCChHHHHHHHHHHcCCCCCCC--
Q 003693 684 --NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA-EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD-- 758 (802)
Q Consensus 684 --~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~-~ev~~~~~~~~~~~~~~~~~l~~v~~~m~~g~fs~~~-- 758 (802)
-.-+|..|.+.|+|..|.. ++.+.+. ++|++|.... +++.+....=.-++......-+..++...+- |||..
T Consensus 322 ~kl~eama~G~PVi~s~~~g~-~~~~~i~-~~G~~~~~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~~-fs~~~~~ 398 (412)
T PRK10307 322 SKLTNMLASGRNVVATAEPGT-ELGQLVE-GIGVCVEPESVEALVAAIAALARQALLRPKLGTVAREYAERT-LDKENVL 398 (412)
T ss_pred HHHHHHHHcCCCEEEEeCCCc-hHHHHHh-CCcEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH-cCHHHHH
Confidence 2347899999999976532 1122222 6899997543 6666655221001100011112233334444 99983
Q ss_pred --hHHHHHHHhh
Q 003693 759 --YNPLLDSLEG 768 (802)
Q Consensus 759 --f~~ly~~l~~ 768 (802)
|..+|+.++.
T Consensus 399 ~~~~~~~~~~~~ 410 (412)
T PRK10307 399 RQFIADIRGLVA 410 (412)
T ss_pred HHHHHHHHHHhc
Confidence 8888888764
No 34
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.49 E-value=1.1e-06 Score=95.74 Aligned_cols=145 Identities=14% Similarity=0.112 Sum_probs=104.7
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
.++.+.++++.|+..+|+..+ ++..+..+.+. + .+.++++.|.+...+.... ...+..+++..
T Consensus 217 ~~~~~~i~~~gr~~~~k~~~~-ll~a~~~l~~~---~-------~~~~l~i~G~~~~~~~~~~--~~~~~~~~~~~---- 279 (398)
T cd03800 217 DPDKPRILAVGRLDPRKGIDT-LIRAYAELPEL---R-------ERANLVIVGGPRDDILAMD--EEELRELAREL---- 279 (398)
T ss_pred CCCCcEEEEEcccccccCHHH-HHHHHHHHHHh---C-------CCeEEEEEECCCCcchhhh--hHHHHHHHHhc----
Confidence 356788999999999999998 88887776542 1 2567888887655433210 01233333322
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
.+.+ +|.|+.-.+.+-...++..||+.+.+|. .|++|+.-+-||..|.+.|++-.|..-|+.++. ++|++|...
T Consensus 280 ~~~~--~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~--~~g~~~~~~ 353 (398)
T cd03800 280 GVID--RVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTALEAMACGLPVVATAVGGPRDIVVDG--VTGLLVDPR 353 (398)
T ss_pred CCCc--eEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHHHHHHhcCCCEEECCCCCHHHHccCC--CCeEEeCCC
Confidence 2234 6888888777777788899999999999 899999999999999999999888776655432 578998754
Q ss_pred -cchHHHHh
Q 003693 721 -AEQVPKLR 728 (802)
Q Consensus 721 -~~ev~~~~ 728 (802)
.+++.+..
T Consensus 354 ~~~~l~~~i 362 (398)
T cd03800 354 DPEALAAAL 362 (398)
T ss_pred CHHHHHHHH
Confidence 46666655
No 35
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=98.47 E-value=2.5e-06 Score=91.27 Aligned_cols=168 Identities=14% Similarity=0.101 Sum_probs=107.7
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
+++.++.+++.|+...|+..+ ++..+.++.+ . . .+.+|++.|.+.-. +++.+++....
T Consensus 185 ~~~~~~~l~~g~~~~~kg~~~-li~a~~~l~~--~-~-------~~~~l~i~G~g~~~----~~~~~~~~~~~------- 242 (360)
T cd04951 185 KNDTFVILAVGRLVEAKDYPN-LLKAFAKLLS--D-Y-------LDIKLLIAGDGPLR----ATLERLIKALG------- 242 (360)
T ss_pred CCCCEEEEEEeeCchhcCcHH-HHHHHHHHHh--h-C-------CCeEEEEEcCCCcH----HHHHHHHHhcC-------
Confidence 467789999999999999999 8887766543 2 1 25799999964311 23333332221
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
..+ +|.|+.. - +-...++.+||+.+.+|+ .|..|..-+=+|..|.+.|++-.|..-|+.++ ++++|...
T Consensus 243 -~~~--~v~~~g~-~-~~~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----~g~~~~~~ 311 (360)
T cd04951 243 -LSN--RVKLLGL-R-DDIAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVVGD----SGLIVPIS 311 (360)
T ss_pred -CCC--cEEEecc-c-ccHHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEecC----CceEeCCC
Confidence 234 5777653 2 333467899999999999 79999999999999999999987877665543 66777643
Q ss_pred c-chHHHHhhhccC-CCCCCChHHHHHHHHHHcCCCCCCC----hHHHH
Q 003693 721 A-EQVPKLRKERED-GLFKPDPRFEEAKQFIRSGAFGSYD----YNPLL 763 (802)
Q Consensus 721 ~-~ev~~~~~~~~~-~~~~~~~~l~~v~~~m~~g~fs~~~----f~~ly 763 (802)
. +++.+...+- . ..-.........++.+.+. |||+. |.++|
T Consensus 312 ~~~~~~~~i~~l-l~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~y 358 (360)
T cd04951 312 DPEALANKIDEI-LKMSGEERDIIGARRERIVKK-FSINSIVQQWLTLY 358 (360)
T ss_pred CHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHh
Confidence 3 5566555221 1 1110011122224445555 88875 44554
No 36
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.46 E-value=2.5e-06 Score=89.58 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=97.8
Q ss_pred CCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 003693 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (802)
Q Consensus 560 vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~d 639 (802)
++++.++++++.|+..+|+.++ ++..+..+.+ . . .+.++++.|.+...... +..++ . +
T Consensus 189 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~i~G~~~~~~~~-~~~~~------~----~ 246 (365)
T cd03807 189 LPEDTFLIGIVARLHPQKDHAT-LLRAAALLLK--K-F-------PNARLLLVGDGPDRANL-ELLAL------K----E 246 (365)
T ss_pred CCCCCeEEEEecccchhcCHHH-HHHHHHHHHH--h-C-------CCeEEEEecCCcchhHH-HHHHH------H----h
Confidence 3467789999999999999998 8888776644 2 1 25799999987654332 22221 1 1
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccc
Q 003693 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (802)
Q Consensus 640 p~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~ 719 (802)
-.+.+ +|.|+.. .-. ...++..||+...+|+ .|..|++-+-||..|.+.|++..|..-|+.++ ++++|..
T Consensus 247 ~~~~~--~v~~~g~-~~~-~~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----~g~~~~~ 316 (365)
T cd03807 247 LGLED--KVILLGE-RSD-VPALLNALDVFVLSSL--SEGFPNVLLEAMACGLPVVATDVGDNAELVGD----TGFLVPP 316 (365)
T ss_pred cCCCc--eEEEccc-ccc-HHHHHHhCCEEEeCCc--cccCCcHHHHHHhcCCCEEEcCCCChHHHhhc----CCEEeCC
Confidence 12344 5666653 223 3468899999999999 69999999999999999999988877655543 7778765
Q ss_pred cc-chHHHHh
Q 003693 720 VA-EQVPKLR 728 (802)
Q Consensus 720 ~~-~ev~~~~ 728 (802)
.. +++....
T Consensus 317 ~~~~~l~~~i 326 (365)
T cd03807 317 GDPEALAEAI 326 (365)
T ss_pred CCHHHHHHHH
Confidence 43 6666555
No 37
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.45 E-value=2.4e-06 Score=91.60 Aligned_cols=168 Identities=12% Similarity=0.015 Sum_probs=112.1
Q ss_pred CCCcceeeccccchh--hhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcC
Q 003693 561 DPNSLFDIQVKRIHE--YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNT 638 (802)
Q Consensus 561 dp~~lfd~~vkR~he--YKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~ 638 (802)
+++..+..+..|... +|+..+ ++..+..+.+- . ..+.++++.|.+.+....
T Consensus 188 ~~~~~~i~~~~~~~~~~~K~~~~-ll~a~~~l~~~-~--------~~~~~~~i~G~~~~~~~~----------------- 240 (365)
T cd03825 188 PADKKIILFGAVGGTDPRKGFDE-LIEALKRLAER-W--------KDDIELVVFGASDPEIPP----------------- 240 (365)
T ss_pred CCCCeEEEEEecCCCccccCHHH-HHHHHHHhhhc-c--------CCCeEEEEeCCCchhhhc-----------------
Confidence 355566666777665 899998 88877665331 0 126799999987664321
Q ss_pred CcCCCCcceEEEEcCCC-hhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeec
Q 003693 639 DPEVNSYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (802)
Q Consensus 639 dp~~~~~lkVvFl~nY~-vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiF 717 (802)
...+ +|.|+.... ...-..++..||+.+++|. .|+.|+.-+-||..|.+.|++-.|...|+... .+++|++
T Consensus 241 --~~~~--~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~--~~~g~~~ 312 (365)
T cd03825 241 --DLPF--PVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPDIVDH--GVTGYLA 312 (365)
T ss_pred --cCCC--ceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHHHHHhcCCCEEEecCCCChhheeC--CCceEEe
Confidence 1133 577777766 5555678899999999999 89999999999999999999999988776553 2578888
Q ss_pred ccc-cchHHHHhhhccCC-CCCCChHHHHHHHHHHcCCCCCCC----hHHHHHH
Q 003693 718 GAV-AEQVPKLRKEREDG-LFKPDPRFEEAKQFIRSGAFGSYD----YNPLLDS 765 (802)
Q Consensus 718 g~~-~~ev~~~~~~~~~~-~~~~~~~l~~v~~~m~~g~fs~~~----f~~ly~~ 765 (802)
... .+++.....+- .+ +-.....-+..++.+... |||+. |.++|++
T Consensus 313 ~~~~~~~~~~~l~~l-~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 313 KPGDPEDLAEGIEWL-LADPDEREELGEAARELAENE-FDSRVQAKRYLSLYEE 364 (365)
T ss_pred CCCCHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHhh
Confidence 765 36666655321 11 100112233344445455 88874 6666654
No 38
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.42 E-value=9.3e-07 Score=96.81 Aligned_cols=177 Identities=17% Similarity=0.128 Sum_probs=116.1
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
++.+.++++.|+.++|++++ ++..+..+.+ . .|.. ..+.++++.|.+... +++.+++.+. .
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~-~~~~---~~~~~l~i~G~g~~~----~~~~~~~~~~--------~ 252 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPT-LVRAFALLVR--Q-LPEG---AERLRLVIVGDGPAR----GACEQMVRAA--------G 252 (374)
T ss_pred CCCeEEEEEecCCcccCHHH-HHHHHHHHHH--h-Cccc---ccceEEEEecCCchH----HHHHHHHHHc--------C
Confidence 56789999999999999999 8888877654 2 2211 125799999975321 2333333322 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccccc
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~ 721 (802)
+.+ .+++.++.-. ...++++||+..++|. .|++|..-+=||..|.+.|+|-.|..-|+.++ ..++++|....
T Consensus 253 ~~~---~v~~~g~~~~-~~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~--~~~g~~~~~~d 324 (374)
T TIGR03088 253 LAH---LVWLPGERDD-VPALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQH--GVTGALVPPGD 324 (374)
T ss_pred Ccc---eEEEcCCcCC-HHHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhcC--CCceEEeCCCC
Confidence 233 4444454333 4567799999999999 89999999999999999999998888776654 25789987543
Q ss_pred -chHHHHhhhccCC-CCCCChHHHHHHHHHHcCCCCCCC----hHHHHHHHh
Q 003693 722 -EQVPKLRKEREDG-LFKPDPRFEEAKQFIRSGAFGSYD----YNPLLDSLE 767 (802)
Q Consensus 722 -~ev~~~~~~~~~~-~~~~~~~l~~v~~~m~~g~fs~~~----f~~ly~~l~ 767 (802)
+++.+... .-.+ +-.....-+..++.+.+. |||.. |.++|++++
T Consensus 325 ~~~la~~i~-~l~~~~~~~~~~~~~a~~~~~~~-fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 325 AVALARALQ-PYVSDPAARRAHGAAGRARAEQQ-FSINAMVAAYAGLYDQLL 374 (374)
T ss_pred HHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHhC
Confidence 66766652 2111 000011122334444454 99984 888887653
No 39
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.40 E-value=4e-06 Score=97.88 Aligned_cols=129 Identities=15% Similarity=0.110 Sum_probs=94.3
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
++.++++++.||+..|++.. ++..+.++.+ . . .+..|++.|.+.. . . .+.+.++.. .
T Consensus 396 ~~~~vIg~VgRl~~~Kg~~~-LI~A~a~llk--~-~-------pdirLvIVGdG~~--~--e----eLk~la~el----g 452 (578)
T PRK15490 396 DADTTIGGVFRFVGDKNPFA-WIDFAARYLQ--H-H-------PATRFVLVGDGDL--R--A----EAQKRAEQL----G 452 (578)
T ss_pred CCCcEEEEEEEEehhcCHHH-HHHHHHHHHh--H-C-------CCeEEEEEeCchh--H--H----HHHHHHHHc----C
Confidence 55678999999999999998 7777766543 3 1 2578999997631 1 1 222333222 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccccc
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~ 721 (802)
+.+ +|.|+. |.-.+ ..++++||++..+|+ +|+.|..-+-+|..|.+.|+|-.|.+-|+.++ ..|||++....
T Consensus 453 L~d--~V~FlG-~~~Dv-~~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d--G~nG~LVp~~D 524 (578)
T PRK15490 453 ILE--RILFVG-ASRDV-GYWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIE--GVSGFILDDAQ 524 (578)
T ss_pred CCC--cEEECC-ChhhH-HHHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHccc--CCcEEEECCCC
Confidence 345 677765 44344 457899999999999 89999999999999999999999988776553 37999997643
No 40
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.38 E-value=5e-06 Score=88.39 Aligned_cols=138 Identities=15% Similarity=0.085 Sum_probs=104.4
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
.++...++++.|+..+|+.++ ++..+..+.. . + .+.++++.|...+.+......+ . +.
T Consensus 192 ~~~~~~i~~~G~~~~~K~~~~-~l~~~~~~~~--~-~-------~~~~l~i~G~~~~~~~~~~~~~---~--------~~ 249 (365)
T cd03809 192 LLPRPYFLYVGTIEPRKNLER-LLEAFARLPA--K-G-------PDPKLVIVGKRGWLNEELLARL---R--------EL 249 (365)
T ss_pred CCCCCeEEEeCCCccccCHHH-HHHHHHHHHH--h-c-------CCCCEEEecCCccccHHHHHHH---H--------Hc
Confidence 356778999999999999998 8887776644 2 1 1578999998888777643333 1 11
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
...+ +|.|+...+-.-...++.+||+.+.+|+ .|..|.+-+-+|..|.+.|+|..|+..|+.. ++++++...
T Consensus 250 ~~~~--~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~----~~~~~~~~~ 321 (365)
T cd03809 250 GLGD--RVRFLGYVSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSLPEVAG----DAALYFDPL 321 (365)
T ss_pred CCCC--eEEECCCCChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCccceec----CceeeeCCC
Confidence 2345 6888877767777888999999999999 8999999999999999999998887766542 456666655
Q ss_pred c-chHHHHh
Q 003693 721 A-EQVPKLR 728 (802)
Q Consensus 721 ~-~ev~~~~ 728 (802)
. +++.+..
T Consensus 322 ~~~~~~~~i 330 (365)
T cd03809 322 DPEALAAAI 330 (365)
T ss_pred CHHHHHHHH
Confidence 4 6776666
No 41
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.38 E-value=3.9e-06 Score=96.02 Aligned_cols=168 Identities=12% Similarity=0.094 Sum_probs=106.7
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
.|+.++++++.|+..+|+.+. ++..+.++ | +..++|+|.+ |. . . .+.++++
T Consensus 260 ~~~~~~i~~vGrl~~~K~~~~-li~a~~~~-------~-------~~~l~ivG~G-~~-~--~----~l~~~~~------ 310 (465)
T PLN02871 260 EPEKPLIVYVGRLGAEKNLDF-LKRVMERL-------P-------GARLAFVGDG-PY-R--E----ELEKMFA------ 310 (465)
T ss_pred CCCCeEEEEeCCCchhhhHHH-HHHHHHhC-------C-------CcEEEEEeCC-hH-H--H----HHHHHhc------
Confidence 357788999999999999887 55433221 1 4689999964 21 1 1 2222221
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCcccccccc-ccCcceeeccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE-IGEENFFLFGA 719 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~-~g~~n~fiFg~ 719 (802)
.. +|.|+.--.-.-...++.+||+...+|. .|..|..-+=+|..|.+.|+|-.|..-|+.+. ...++|++|..
T Consensus 311 --~~--~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~ 384 (465)
T PLN02871 311 --GT--PTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTP 384 (465)
T ss_pred --cC--CeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCC
Confidence 11 4666543222445568899999999998 89999999999999999999988877666553 12378999975
Q ss_pred c-cchHHHHhhhccCCCCCCChH---HHHHHHHHHcCCCCCCC----hHH-HHHHHhh
Q 003693 720 V-AEQVPKLRKEREDGLFKPDPR---FEEAKQFIRSGAFGSYD----YNP-LLDSLEG 768 (802)
Q Consensus 720 ~-~~ev~~~~~~~~~~~~~~~~~---l~~v~~~m~~g~fs~~~----f~~-ly~~l~~ 768 (802)
. .+++.+....- .+ ++... -+...... . .|+|.. +.. +|..++.
T Consensus 385 ~d~~~la~~i~~l-l~--~~~~~~~~~~~a~~~~-~-~fsw~~~a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 385 GDVDDCVEKLETL-LA--DPELRERMGAAAREEV-E-KWDWRAATRKLRNEQYSAAIW 437 (465)
T ss_pred CCHHHHHHHHHHH-Hh--CHHHHHHHHHHHHHHH-H-hCCHHHHHHHHHHHHHHHHHH
Confidence 3 36666555221 11 11111 11122222 3 499983 555 6877764
No 42
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.36 E-value=5.1e-06 Score=99.89 Aligned_cols=171 Identities=16% Similarity=0.195 Sum_probs=110.9
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
..+.++++++.|++++|++++ ++..+.++.+ . .| ...++|.|.+. +.. .+.++++..
T Consensus 514 ~~~~~vIg~VGRL~~~KG~~~-LI~A~a~l~~--~-~p-------~~~LvIvG~G~--~~~------~L~~l~~~l---- 570 (694)
T PRK15179 514 SDARFTVGTVMRVDDNKRPFL-WVEAAQRFAA--S-HP-------KVRFIMVGGGP--LLE------SVREFAQRL---- 570 (694)
T ss_pred CCCCeEEEEEEeCCccCCHHH-HHHHHHHHHH--H-Cc-------CeEEEEEccCc--chH------HHHHHHHHc----
Confidence 345788999999999999999 8888877754 3 22 47899999763 222 233333322
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
.+.+ +|.| .+|.-.+. .++.+||++..+|+ +|..|..=+-+|..|.+.|+|..|..-|+.++ ..||+++...
T Consensus 571 gL~~--~V~f-lG~~~dv~-~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~d--g~~GlLv~~~ 642 (694)
T PRK15179 571 GMGE--RILF-TGLSRRVG-YWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQE--GVTGLTLPAD 642 (694)
T ss_pred CCCC--cEEE-cCCcchHH-HHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccC--CCCEEEeCCC
Confidence 2345 4555 55654444 67899999999998 99999999999999999999988877666543 3689998633
Q ss_pred c---chHHHHhhhccCCCCCCChHHHH-HHHHHHcCCCCCCC----hHHHHH
Q 003693 721 A---EQVPKLRKEREDGLFKPDPRFEE-AKQFIRSGAFGSYD----YNPLLD 764 (802)
Q Consensus 721 ~---~ev~~~~~~~~~~~~~~~~~l~~-v~~~m~~g~fs~~~----f~~ly~ 764 (802)
. +++.+...+- ......++.+.. .+....+ .|||.. |.++|+
T Consensus 643 d~~~~~La~aL~~l-l~~l~~~~~l~~~ar~~a~~-~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 643 TVTAPDVAEALARI-HDMCAADPGIARKAADWASA-RFSLNQMIASTVRCYQ 692 (694)
T ss_pred CCChHHHHHHHHHH-HhChhccHHHHHHHHHHHHH-hCCHHHHHHHHHHHhC
Confidence 2 2333333111 111112344433 3333334 499884 666654
No 43
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.36 E-value=2e-06 Score=94.71 Aligned_cols=145 Identities=17% Similarity=0.138 Sum_probs=102.5
Q ss_pred HhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 003693 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (802)
Q Consensus 555 ~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~ 634 (802)
++| ++++..+++++.|++.+|++++ ++..+..+.+. . .+.+++++|.+.+.....+++.+.+.+..
T Consensus 183 ~~~--~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~---~-------~~~~l~i~G~g~~~~~~~~~~~~~~~~~~- 248 (372)
T cd03792 183 KYG--IDPERPYITQVSRFDPWKDPFG-VIDAYRKVKER---V-------PDPQLVLVGSGATDDPEGWIVYEEVLEYA- 248 (372)
T ss_pred HhC--CCCCCcEEEEEeccccccCcHH-HHHHHHHHHhh---C-------CCCEEEEEeCCCCCCchhHHHHHHHHHHh-
Confidence 345 4578899999999999999999 88887776441 1 14689999998665433334333333211
Q ss_pred HhcCCcCCCCcceEEEEcCC--ChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCc
Q 003693 635 VVNTDPEVNSYLKVVFVPNY--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 712 (802)
Q Consensus 635 ~in~dp~~~~~lkVvFl~nY--~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~ 712 (802)
...+ +|.|+... +-.....++++||++.++|+ .|..|..-+-||..|.+.|+|-.|..-|+.+ +..
T Consensus 249 ------~~~~--~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~--~~~ 316 (372)
T cd03792 249 ------EGDP--DIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIE--DGE 316 (372)
T ss_pred ------CCCC--CeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCchhhcc--cCC
Confidence 2234 57777665 55666678999999999999 9999999999999999999987665444332 236
Q ss_pred ceeecccccchHHH
Q 003693 713 NFFLFGAVAEQVPK 726 (802)
Q Consensus 713 n~fiFg~~~~ev~~ 726 (802)
++|++.. .++...
T Consensus 317 ~g~~~~~-~~~~a~ 329 (372)
T cd03792 317 TGFLVDT-VEEAAV 329 (372)
T ss_pred ceEEeCC-cHHHHH
Confidence 7888763 344333
No 44
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.34 E-value=1e-05 Score=84.71 Aligned_cols=166 Identities=15% Similarity=0.040 Sum_probs=112.3
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
+.+.+..+++.|+...|+... ++..+..+.+ . + .+.++++.|.+.+.. .+.+++. +.
T Consensus 199 ~~~~~~i~~~g~~~~~k~~~~-li~~~~~~~~--~-~-------~~~~l~i~g~~~~~~----~~~~~~~--------~~ 255 (377)
T cd03798 199 PEDKKVILFVGRLVPRKGIDY-LIEALARLLK--K-R-------PDVHLVIVGDGPLRE----ALEALAA--------EL 255 (377)
T ss_pred CCCceEEEEeccCccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEcCCcchH----HHHHHHH--------hc
Confidence 356788999999999999998 8887776543 1 1 257899999865432 2222222 22
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
...+ .|.|+...+-+-...++..||+.+++|+ .|+.|+.-+-+|..|.+.|++..|+.-|..+.. .+|++|...
T Consensus 256 ~~~~--~v~~~g~~~~~~~~~~~~~ad~~i~~~~--~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~--~~g~~~~~~ 329 (377)
T cd03798 256 GLED--RVTFLGAVPHEEVPAYYAAADVFVLPSL--REGFGLVLLEAMACGLPVVATDVGGIPEIITDG--ENGLLVPPG 329 (377)
T ss_pred CCcc--eEEEeCCCCHHHHHHHHHhcCeeecchh--hccCChHHHHHHhcCCCEEEecCCChHHHhcCC--cceeEECCC
Confidence 2344 6777777666666788899999999999 699999999999999999999989877665442 456888755
Q ss_pred c-chHHHHhhhccCCCCCCChHHHHHHHHHHcCCCCCCC
Q 003693 721 A-EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD 758 (802)
Q Consensus 721 ~-~ev~~~~~~~~~~~~~~~~~l~~v~~~m~~g~fs~~~ 758 (802)
. +++.....+ ..+.... ...+.....+... |+|+.
T Consensus 330 ~~~~l~~~i~~-~~~~~~~-~~~~~~~~~~~~~-~s~~~ 365 (377)
T cd03798 330 DPEALAEAILR-LLADPWL-RLGRAARRRVAER-FSWEN 365 (377)
T ss_pred CHHHHHHHHHH-HhcCcHH-HHhHHHHHHHHHH-hhHHH
Confidence 4 666555522 1211111 2233444444444 78775
No 45
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.34 E-value=4.8e-06 Score=90.02 Aligned_cols=138 Identities=16% Similarity=0.145 Sum_probs=99.4
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~ 643 (802)
....+++.|+..+|+.+. ++..+..+.+ . + .+..++++|.+. +. . .+..+++.. .+.
T Consensus 188 ~~~i~~~G~~~~~K~~~~-li~a~~~l~~--~-~-------~~~~l~ivG~g~--~~--~----~~~~~~~~~----~~~ 244 (367)
T cd05844 188 PPRILFVGRFVEKKGPLL-LLEAFARLAR--R-V-------PEVRLVIIGDGP--LL--A----ALEALARAL----GLG 244 (367)
T ss_pred CcEEEEEEeeccccChHH-HHHHHHHHHH--h-C-------CCeEEEEEeCch--HH--H----HHHHHHHHc----CCC
Confidence 456889999999999998 8887776644 2 1 257899999642 11 1 233333321 124
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCC----ccCCCcccchhhccCceEEEeecCccccccccccCcceeeccc
Q 003693 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (802)
Q Consensus 644 ~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~----~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~ 719 (802)
+ +|.|+...+-.--..++.+||+...+|..+ .|++|+.-+=+|.-|.+.|++-.|.+-|+..+ .+++++|..
T Consensus 245 ~--~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~--~~~g~~~~~ 320 (367)
T cd05844 245 G--RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVED--GETGLLVPE 320 (367)
T ss_pred C--eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheec--CCeeEEECC
Confidence 5 788888776666667889999999998732 58999999999999999999988887665543 368899975
Q ss_pred c-cchHHHHh
Q 003693 720 V-AEQVPKLR 728 (802)
Q Consensus 720 ~-~~ev~~~~ 728 (802)
. .+++.+..
T Consensus 321 ~d~~~l~~~i 330 (367)
T cd05844 321 GDVAALAAAL 330 (367)
T ss_pred CCHHHHHHHH
Confidence 3 36776665
No 46
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.32 E-value=9.6e-06 Score=94.59 Aligned_cols=287 Identities=17% Similarity=0.213 Sum_probs=161.4
Q ss_pred hHhhhhhHHHHHHHHHHcccCcccccCCCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCch-
Q 003693 304 FFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLP- 382 (802)
Q Consensus 304 yfl~~a~lqdi~r~~~~~~g~~~l~~l~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~- 382 (802)
..||-|+- ..|..|.+.. .. ..+++.|+|||-++++ +-++|... ..-.+|||||--+.
T Consensus 122 ~~Fgyava-~fi~~f~~~~----~~--~~~ViaHfHEWmaG~g-ll~lr~~~-------------~~VaTvFTTHAT~lG 180 (633)
T PF05693_consen 122 VMFGYAVA-WFIEEFYKFY----EE--KPKVIAHFHEWMAGVG-LLYLRKRK-------------PDVATVFTTHATLLG 180 (633)
T ss_dssp HHHHHHHH-HHHHHHHHH-----S---SEEEEEEEESGGGTTH-HHHHHHTT--------------SCEEEEEESS-HHH
T ss_pred HHHHHHHH-HHHHHHHHhh----cC--CCcEEEEechHhHhHH-HHHHhccC-------------CCeeEEEEecccchh
Confidence 56666553 3455554433 11 4678999999999999 44555532 57899999996543
Q ss_pred -----------hhhhhccHHHHHhhchhHHHHHHHHHHHHHHHHHHhCCCCcchhcccccccCCCCCCccccccchhhcC
Q 003693 383 -----------EALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSA 451 (802)
Q Consensus 383 -----------eglE~w~~~l~~~~Lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai~~S 451 (802)
.-+++|+.+.... ..+ |. .+..|-..|...+
T Consensus 181 R~l~~~~~~~Y~~L~~~~~d~eA~--------------------------------~~~-i~-----~k~~iEraaA~~A 222 (633)
T PF05693_consen 181 RYLAANNKDFYNNLDKFNGDQEAG--------------------------------ERN-IY-----HKHSIERAAAHYA 222 (633)
T ss_dssp HHHTTTSS-TTTSGTTS-HHHHHH--------------------------------HTT--H-----HHHHHHHHHHHHS
T ss_pred hHhhcCCCcHHHHhhccCcccccc--------------------------------Ccc-ch-----HHHHHHHHHHHhc
Confidence 2222332222110 111 11 1567778899999
Q ss_pred CchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhhhccCCCH
Q 003693 452 HTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNT 531 (802)
Q Consensus 452 ~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~ 531 (802)
|-.++||.+=+.+.+. .++. -|+-+. -||++.... ....
T Consensus 223 dvFTTVSeITa~Ea~~-LL~r----~pDvV~--pNGl~v~~~----------------------------------~~~~ 261 (633)
T PF05693_consen 223 DVFTTVSEITAKEAEH-LLKR----KPDVVT--PNGLNVDKF----------------------------------PALH 261 (633)
T ss_dssp SEEEESSHHHHHHHHH-HHSS------SEE------B-GGGT----------------------------------SSTT
T ss_pred CeeeehhhhHHHHHHH-HhCC----CCCEEc--CCCcccccc----------------------------------ccch
Confidence 9999999998888773 2321 133222 389876655 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-C-CCCCCC-cceeeccccc-hhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCe
Q 003693 532 ELQAEWESAKMASKKHLADYIWRVT-G-VTIDPN-SLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPR 607 (802)
Q Consensus 532 ~~~~~~~~~K~~nK~~L~~~i~~~~-g-~~vdp~-~lfd~~vkR~-heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~ 607 (802)
+ +...|..+|+++.++++..+ | .++||| .++..-+.|. =.-|+.++ .+..+.|+.+.+..... +.+=+
T Consensus 262 e----fqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~-fieAL~rLn~~lk~~~~---~~tVV 333 (633)
T PF05693_consen 262 E----FQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDV-FIEALARLNHRLKQAGS---DKTVV 333 (633)
T ss_dssp H----HHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHH-HHHHHHHHHHHHHHTT----S-EEE
T ss_pred H----HHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccH-HHHHHHHHHHHHhhcCC---CCeEE
Confidence 2 45788999999999999875 3 367775 5666667887 35699999 99999999864331111 11112
Q ss_pred EEEEEecCCC--------CCHHHHHHHHHHHHHHHHh-------------------------------------------
Q 003693 608 TIMIGGKAFA--------TYTNAKRIVKLVNDVGEVV------------------------------------------- 636 (802)
Q Consensus 608 ~fIf~GKA~P--------~y~~aK~iIk~I~~va~~i------------------------------------------- 636 (802)
.||+-=-..- +...-|++-.-++++.+.|
T Consensus 334 aFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi 413 (633)
T PF05693_consen 334 AFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPI 413 (633)
T ss_dssp EEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----S
T ss_pred EEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCe
Confidence 2333211111 1122222222222222221
Q ss_pred --------cCCcCC------------CCcceEEEEcCCChhHH-------hhhcccccccccCCCCCccCCCcccchhhc
Q 003693 637 --------NTDPEV------------NSYLKVVFVPNYNVSVA-------ELLIPGSELSQHISTAGMEASGTSNMKFSL 689 (802)
Q Consensus 637 --------n~dp~~------------~~~lkVvFl~nY~vslA-------~~iipgaDv~l~iS~a~~EASGTs~MKa~l 689 (802)
++||.+ .+++||+|+|.|=-+-- .-++.|||+..-||. +||-|---+-+..
T Consensus 414 ~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSY--YEPWGYTPlE~~a 491 (633)
T PF05693_consen 414 TTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSY--YEPWGYTPLECTA 491 (633)
T ss_dssp BSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--S--SBSS-HHHHHHHH
T ss_pred eeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccc--cccccCChHHHhh
Confidence 234432 46799999998843332 347899999999999 9999999999999
Q ss_pred cCceEEEe-ecC
Q 003693 690 NGCLIIGT-LDG 700 (802)
Q Consensus 690 NGal~i~t-lDG 700 (802)
.|.++|.| |.|
T Consensus 492 ~gVPsITTnLsG 503 (633)
T PF05693_consen 492 FGVPSITTNLSG 503 (633)
T ss_dssp TT--EEEETTBH
T ss_pred cCCceeeccchh
Confidence 99999988 445
No 47
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.30 E-value=9.7e-06 Score=87.06 Aligned_cols=137 Identities=13% Similarity=0.031 Sum_probs=95.9
Q ss_pred CCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 003693 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (802)
Q Consensus 560 vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~d 639 (802)
..++.+.++++.|+..+|+.++ ++..+..+.+ . . .+.++++.|.+... . .+...++..
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~-li~a~~~l~~--~-~-------~~~~l~ivG~g~~~-~-------~~~~~~~~~--- 245 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEF-LIEIFAELLK--K-N-------PNAKLLLVGDGELE-E-------EIKKKVKEL--- 245 (358)
T ss_pred CCCCCEEEEEEeccccccChHH-HHHHHHHHHH--h-C-------CCeEEEEEeCCchH-H-------HHHHHHHhc---
Confidence 3467899999999999999999 8888777654 2 1 25789999976532 1 222222212
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccc
Q 003693 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (802)
Q Consensus 640 p~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~ 719 (802)
.+.+ +|.|+.- .-. ...++..||+..+||+ .|.+|..-|-||..|.+.|+|-.|..-|+.++ +.+|+.-.
T Consensus 246 -~~~~--~v~~~g~-~~~-~~~~~~~adi~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~---~~~~~~~~ 315 (358)
T cd03812 246 -GLED--KVIFLGV-RND-VPELLQAMDVFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEVDLTD---LVKFLSLD 315 (358)
T ss_pred -CCCC--cEEEecc-cCC-HHHHHHhcCEEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc---CccEEeCC
Confidence 2344 5666554 333 4457899999999999 79999999999999999999988877655443 33444433
Q ss_pred cc-chHHHHh
Q 003693 720 VA-EQVPKLR 728 (802)
Q Consensus 720 ~~-~ev~~~~ 728 (802)
.. +++.+..
T Consensus 316 ~~~~~~a~~i 325 (358)
T cd03812 316 ESPEIWAEEI 325 (358)
T ss_pred CCHHHHHHHH
Confidence 33 6666555
No 48
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.25 E-value=1.5e-05 Score=85.21 Aligned_cols=140 Identities=17% Similarity=0.105 Sum_probs=102.2
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
++.+.++++.|+..+|+.++ ++..+.++.+ . + .+.++++.|.+.+... +-+++.++ .
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~-l~~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~----~~~~~~~~--------~ 233 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDY-LLEALALLKD--R-G-------IDFRLDIVGDGPLRDE----LEALIAEL--------G 233 (355)
T ss_pred CCCeEEEEEeeeccccCHHH-HHHHHHHHhh--c-C-------CCeEEEEEECCccHHH----HHHHHHHc--------C
Confidence 45577889999999999999 8888877643 2 1 2578999998765422 22222222 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCC----ccCCCcccchhhccCceEEEeecCccccccccccCcceeec
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~----~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiF 717 (802)
..+ .|.|.....-.-...++..||+.+.+|+.+ .|..|++-+-+|..|.+.|++-.|..-|+.+. ..++++|
T Consensus 234 ~~~--~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~--~~~g~~~ 309 (355)
T cd03799 234 LED--RVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVED--GETGLLV 309 (355)
T ss_pred CCC--eEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhC--CCceEEe
Confidence 244 578877776666778889999999999931 29999999999999999999988877665543 2488999
Q ss_pred cc-ccchHHHHh
Q 003693 718 GA-VAEQVPKLR 728 (802)
Q Consensus 718 g~-~~~ev~~~~ 728 (802)
.. ..+++.+..
T Consensus 310 ~~~~~~~l~~~i 321 (355)
T cd03799 310 PPGDPEALADAI 321 (355)
T ss_pred CCCCHHHHHHHH
Confidence 76 447777666
No 49
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.19 E-value=4.2e-05 Score=79.66 Aligned_cols=139 Identities=16% Similarity=0.140 Sum_probs=101.1
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
.++.+.++++.|+...|+... ++..+..+.+ . + ...++++.|.+ .+. . .+....+ +.
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~-~i~~~~~~~~--~-~-------~~~~l~i~G~~--~~~--~----~~~~~~~----~~ 252 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDL-LLEALAKLRK--E-Y-------PDVRLVIVGDG--PLR--E----ELEALAA----EL 252 (374)
T ss_pred cCCCeEEEEecchhhhcCHHH-HHHHHHHHhh--h-c-------CCeEEEEEeCc--HHH--H----HHHHHHH----Hh
Confidence 356788999999999999988 7777666543 2 1 24789999922 111 1 2222221 12
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
...+ +|.|+...+-.-...++..||+..++|+ .|++|+.-+-+|..|.+.|+|-.|..-|+.+. ..+++++...
T Consensus 253 ~~~~--~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~--~~~g~~~~~~ 326 (374)
T cd03801 253 GLGD--RVTFLGFVPDEDLPALYAAADVFVLPSL--YEGFGLVLLEAMAAGLPVVASDVGGIPEVVED--GETGLLVPPG 326 (374)
T ss_pred CCCc--ceEEEeccChhhHHHHHHhcCEEEecch--hccccchHHHHHHcCCcEEEeCCCChhHHhcC--CcceEEeCCC
Confidence 2345 7888887765667778899999999999 59999999999999999999988877666554 3688888887
Q ss_pred -cchHHHHh
Q 003693 721 -AEQVPKLR 728 (802)
Q Consensus 721 -~~ev~~~~ 728 (802)
.+++.+..
T Consensus 327 ~~~~l~~~i 335 (374)
T cd03801 327 DPEALAEAI 335 (374)
T ss_pred CHHHHHHHH
Confidence 47776666
No 50
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.17 E-value=1.1e-05 Score=90.07 Aligned_cols=145 Identities=14% Similarity=0.128 Sum_probs=104.2
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCC
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTD 639 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y-~~aK~iIk~I~~va~~in~d 639 (802)
+++...++++.|+..+|+.+. ++..+.++.+ . .| +..+++.|.+.... .......+.+.+++...
T Consensus 190 ~~~~~~il~~Grl~~~Kg~~~-Li~A~~~l~~--~-~p-------~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l--- 255 (380)
T PRK15484 190 SPDETVLLYAGRISPDKGILL-LMQAFEKLAT--A-HS-------NLKLVVVGDPTASSKGEKAAYQKKVLEAAKRI--- 255 (380)
T ss_pred CCCCeEEEEeccCccccCHHH-HHHHHHHHHH--h-CC-------CeEEEEEeCCccccccchhHHHHHHHHHHHhc---
Confidence 456678899999999999999 8888777643 2 22 47888888764321 11223344555555444
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCc-cCCCcccchhhccCceEEEeecCccccccccccCcceeecc
Q 003693 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (802)
Q Consensus 640 p~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~-EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg 718 (802)
.. +|.|+..-.-+-...++++||+...+|+ + |+.|+.-+=||..|.+.|+|..|...|+.++ ..|||++.
T Consensus 256 ---~~--~v~~~G~~~~~~l~~~~~~aDv~v~pS~--~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~--~~~G~~l~ 326 (380)
T PRK15484 256 ---GD--RCIMLGGQPPEKMHNYYPLADLVVVPSQ--VEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE--GITGYHLA 326 (380)
T ss_pred ---CC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--CccccccHHHHHHHcCCCEEEeCCCCcHhhccc--CCceEEEe
Confidence 33 6788776555566778999999999997 5 9999999999999999999999988777654 36888552
Q ss_pred --cccchHHHHh
Q 003693 719 --AVAEQVPKLR 728 (802)
Q Consensus 719 --~~~~ev~~~~ 728 (802)
...+++.+..
T Consensus 327 ~~~d~~~la~~I 338 (380)
T PRK15484 327 EPMTSDSIISDI 338 (380)
T ss_pred CCCCHHHHHHHH
Confidence 3446666555
No 51
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.16 E-value=1.1e-05 Score=88.59 Aligned_cols=151 Identities=17% Similarity=0.187 Sum_probs=111.8
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
.++.++++++.|+.+.|++++ ++.++.++.+ . .+ ...+.++++.|.+.+.....-.....+.++++.. .
T Consensus 208 ~~~~~~i~~~grl~~~Kg~~~-ll~a~~~l~~--~-~~----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~---~ 276 (392)
T cd03805 208 KSGKKTFLSINRFERKKNIAL-AIEAFAILKD--K-LA----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEEL---L 276 (392)
T ss_pred CCCceEEEEEeeecccCChHH-HHHHHHHHHh--h-cc----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHh---c
Confidence 367789999999999999999 9988888754 2 10 0125789999988776444333334555555430 2
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
.+.+ +|.|+....-.....++.+||+.+.+|. .|..|++-+-+|..|.+.|+|..|...|+... ..+++++...
T Consensus 277 ~l~~--~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~--~~~g~~~~~~ 350 (392)
T cd03805 277 LLED--QVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVD--GETGFLCEPT 350 (392)
T ss_pred CCCc--eEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhcc--CCceEEeCCC
Confidence 3345 8999988777766788999999999998 89999999999999999999988876655443 2578888766
Q ss_pred cchHHHHh
Q 003693 721 AEQVPKLR 728 (802)
Q Consensus 721 ~~ev~~~~ 728 (802)
.+++.+..
T Consensus 351 ~~~~a~~i 358 (392)
T cd03805 351 PEEFAEAM 358 (392)
T ss_pred HHHHHHHH
Confidence 66666555
No 52
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=98.15 E-value=4.1e-05 Score=88.18 Aligned_cols=151 Identities=13% Similarity=0.118 Sum_probs=99.8
Q ss_pred CcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCC-CCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 563 ~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~-P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
+..+++.|.|++..|+... ++..+.++.+ + +|+.+ ..+++|..|... ..-..-.++.+.+.+++..+|..-.
T Consensus 258 ~~~vIl~VgRLd~~KGi~~-ll~A~~~ll~--~-~p~~~---~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~ 330 (456)
T TIGR02400 258 GRKLIIGVDRLDYSKGLPE-RLLAFERFLE--E-HPEWR---GKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFG 330 (456)
T ss_pred CCeEEEEccccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccC
Confidence 5678889999999999999 9999888754 4 45421 135566554322 1122234566777777777764211
Q ss_pred CCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcccchhhccCce-----EEEeecCccccccccccCccee
Q 003693 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL-----IIGTLDGANVEIRQEIGEENFF 715 (802)
Q Consensus 642 ~~~~lkVvFl~n-Y~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal-----~i~tlDGanvEi~e~~g~~n~f 715 (802)
..+...|+|+.. .+-+---.++.+||+.+.+|+ .|.-|+.-+=||.-|.+ .+|...|+--++ + +++
T Consensus 331 ~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~--~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l----~--~gl 402 (456)
T TIGR02400 331 TLDWTPIRYLNRSYDREELMALYRAADVGLVTPL--RDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL----N--GAL 402 (456)
T ss_pred CCCCccEEEEcCCCCHHHHHHHHHhCcEEEECcc--ccccCccHHHHHHhcCCCCceEEEeCCCCChHHh----C--CcE
Confidence 112223666664 344455567899999999999 89999999998877775 666666655332 2 678
Q ss_pred eccccc-chHHHHh
Q 003693 716 LFGAVA-EQVPKLR 728 (802)
Q Consensus 716 iFg~~~-~ev~~~~ 728 (802)
++.... +++.+.+
T Consensus 403 lVnP~d~~~lA~aI 416 (456)
T TIGR02400 403 LVNPYDIDGMADAI 416 (456)
T ss_pred EECCCCHHHHHHHH
Confidence 887655 6676666
No 53
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.09 E-value=1e-05 Score=90.07 Aligned_cols=203 Identities=16% Similarity=0.218 Sum_probs=135.6
Q ss_pred cchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCccccccccChhHHHHHHHhcCccccccCchhHHhh
Q 003693 445 NLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL 524 (802)
Q Consensus 445 ~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l 524 (802)
.+++..++.|-.+|+...+.++ ..+++++.-|.|||+...+- |.-
T Consensus 151 ~~~~~~ad~vi~~s~~~~~~~~--------~~~~~ki~vI~ngvd~~~f~----~~~----------------------- 195 (396)
T cd03818 151 LLALAQADAGVSPTRWQRSTFP--------AELRSRISVIHDGIDTDRLR----PDP----------------------- 195 (396)
T ss_pred HHHHHhCCEEECCCHHHHhhCc--------HhhccceEEeCCCccccccC----CCc-----------------------
Confidence 3556677888888876555443 22357888899999987762 210
Q ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcceeecccc-chhhhhhhhhhhhHHHHHHHHHhcCcccccC
Q 003693 525 RQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKR-IHEYKRQLLNILGAIYRYKKLKEMSPQERKK 603 (802)
Q Consensus 525 ~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g~~vdp~~lfd~~vkR-~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~ 603 (802)
. - ..+ + ..+..+.++.++++++.| +..+|+.++ ++..+.++.+ . +|
T Consensus 196 -----~------~-~~~------~------~~~~~~~~~~~~i~~vgR~l~~~Kg~~~-ll~a~~~l~~--~-~~----- 242 (396)
T cd03818 196 -----Q------A-RLR------L------PNGRVLTPGDEVITFVARNLEPYRGFHV-FMRALPRLLR--A-RP----- 242 (396)
T ss_pred -----h------h-hhc------c------cccccCCCCCeEEEEECCCcccccCHHH-HHHHHHHHHH--H-CC-----
Confidence 0 0 000 0 011124567788999998 999999999 8888877654 2 22
Q ss_pred CCCeEEEEEecCCCCCHHH----H-HHHHHHHHHHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCcc
Q 003693 604 TTPRTIMIGGKAFATYTNA----K-RIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGME 678 (802)
Q Consensus 604 ~~P~~fIf~GKA~P~y~~a----K-~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~E 678 (802)
+..+++.|.+.|.|... . ..-+++..++...+ .+ +|.|+....-.-...++.+||+...+|. .|
T Consensus 243 --~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~--~V~f~G~v~~~~~~~~l~~adv~v~~s~--~e 311 (396)
T cd03818 243 --DARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD-----LS--RVHFLGRVPYDQYLALLQVSDVHVYLTY--PF 311 (396)
T ss_pred --CcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC-----cc--eEEEeCCCCHHHHHHHHHhCcEEEEcCc--cc
Confidence 47889999866654321 1 11123333432221 24 7888877655555678899999999999 78
Q ss_pred CCCcccchhhccCceEEEeecCccccccccccCcceeecccc-cchHHHHh
Q 003693 679 ASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV-AEQVPKLR 728 (802)
Q Consensus 679 ASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~-~~ev~~~~ 728 (802)
..|.+-+-+|.-|.+.|+|-.|..-|+.+. .++++++... .+++.+..
T Consensus 312 ~~~~~llEAmA~G~PVIas~~~g~~e~i~~--~~~G~lv~~~d~~~la~~i 360 (396)
T cd03818 312 VLSWSLLEAMACGCLVVGSDTAPVREVITD--GENGLLVDFFDPDALAAAV 360 (396)
T ss_pred ccchHHHHHHHCCCCEEEcCCCCchhhccc--CCceEEcCCCCHHHHHHHH
Confidence 889999999999999999988877666543 3689998754 46666655
No 54
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.98 E-value=2.3e-05 Score=76.37 Aligned_cols=141 Identities=21% Similarity=0.211 Sum_probs=101.0
Q ss_pred CCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 003693 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (802)
Q Consensus 560 vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~d 639 (802)
.+.+.++++++.|+...|+.++ ++..+.++..-+. ....+++.|...... .+...++..
T Consensus 11 ~~~~~~~il~~g~~~~~K~~~~-li~a~~~l~~~~~---------~~~~l~i~G~~~~~~--------~~~~~~~~~--- 69 (172)
T PF00534_consen 11 IPDKKKIILFIGRLDPEKGIDL-LIEAFKKLKEKKN---------PNYKLVIVGDGEYKK--------ELKNLIEKL--- 69 (172)
T ss_dssp T-TTSEEEEEESESSGGGTHHH-HHHHHHHHHHHHH---------TTEEEEEESHCCHHH--------HHHHHHHHT---
T ss_pred CCCCCeEEEEEecCccccCHHH-HHHHHHHHHhhcC---------CCeEEEEEccccccc--------ccccccccc---
Confidence 4578899999999999999999 9999888764212 257999999322211 222233222
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccc
Q 003693 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (802)
Q Consensus 640 p~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~ 719 (802)
.+.. +|.|+....-.--..++..||+.+.+|+ .|..|++-+-+|..|.++|++..|..-|+.... .+|++|..
T Consensus 70 -~~~~--~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~--~~g~~~~~ 142 (172)
T PF00534_consen 70 -NLKE--NIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIINDG--VNGFLFDP 142 (172)
T ss_dssp -TCGT--TEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT--TSEEEEST
T ss_pred -cccc--cccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeeccc--cceEEeCC
Confidence 1244 6888887765566778888999999999 699999999999999999999988887776654 47888866
Q ss_pred cc-chHHHHh
Q 003693 720 VA-EQVPKLR 728 (802)
Q Consensus 720 ~~-~ev~~~~ 728 (802)
.. +++.+..
T Consensus 143 ~~~~~l~~~i 152 (172)
T PF00534_consen 143 NDIEELADAI 152 (172)
T ss_dssp TSHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 64 5555544
No 55
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.96 E-value=2e-05 Score=84.31 Aligned_cols=137 Identities=15% Similarity=0.081 Sum_probs=101.5
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
.+.+.++++.|+.++|+.+. ++.++.++. +..++++|.+... ..+.+++.. ..
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~-li~a~~~l~--------------~~~l~i~G~g~~~----~~~~~~~~~--------~~ 241 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDV-LLEAAAALP--------------DAPLVIVGEGPLE----AELEALAAA--------LG 241 (357)
T ss_pred CCCcEEEEecccccccCHHH-HHHHHHhcc--------------CcEEEEEeCChhH----HHHHHHHHh--------cC
Confidence 45678999999999999998 776655431 3689999987432 222223322 22
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc-
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV- 720 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~- 720 (802)
... +|.|++..+-.....++..||+..++|....|..|++-+-+|..|.+.|+|..|..-|..+. ..++|++|...
T Consensus 242 ~~~--~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~-~~~~g~~~~~~d 318 (357)
T cd03795 242 LLD--RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL-HGVTGLVVPPGD 318 (357)
T ss_pred Ccc--eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh-CCCceEEeCCCC
Confidence 244 79999988876677888999999999987789999999999999999999988876655443 34789998755
Q ss_pred cchHHHHh
Q 003693 721 AEQVPKLR 728 (802)
Q Consensus 721 ~~ev~~~~ 728 (802)
.+++.+..
T Consensus 319 ~~~~~~~i 326 (357)
T cd03795 319 PAALAEAI 326 (357)
T ss_pred HHHHHHHH
Confidence 36666655
No 56
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.93 E-value=2.6e-05 Score=77.11 Aligned_cols=120 Identities=18% Similarity=0.121 Sum_probs=93.8
Q ss_pred ccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCCcceE
Q 003693 569 QVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKV 648 (802)
Q Consensus 569 ~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~~lkV 648 (802)
++.|+..+|+.++ ++..+.++.+ . . .+.+++|.|+..+.+...+. +.. ....+ +|
T Consensus 109 ~~g~~~~~k~~~~-~~~a~~~l~~--~-~-------~~~~~~i~G~~~~~~~~~~~----~~~--------~~~~~--~v 163 (229)
T cd01635 109 FVGRLAPEKGLDD-LIEAFALLKE--R-G-------PDLKLVIAGDGPEREYLEEL----LAA--------LLLLD--RV 163 (229)
T ss_pred EEEeecccCCHHH-HHHHHHHHHH--h-C-------CCeEEEEEeCCCChHHHHHH----HHh--------cCCcc--cE
Confidence 8889999999999 8887777654 2 1 25899999999887766433 111 12244 68
Q ss_pred EEEcCC-ChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeec
Q 003693 649 VFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (802)
Q Consensus 649 vFl~nY-~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiF 717 (802)
.|+..+ .....+.+..+||+.+.+|+ .|++|++-+-+|..|.+.|+|.+|+.-|+.++ .+++|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~--~~~g~~~ 229 (229)
T cd01635 164 IFLGGLDPEELLALLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVGGPPEIVED--GLTGLLV 229 (229)
T ss_pred EEeCCCCcHHHHHHHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCCCcceEEEC--CCceEEC
Confidence 888887 66778888888999999999 88999999999999999999999998775433 3677765
No 57
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.92 E-value=0.00029 Score=79.70 Aligned_cols=144 Identities=14% Similarity=0.125 Sum_probs=95.2
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
++..+.+.+.|+.+.|+.+. ++.++..+.+... ... ......+++.|.+. . -.++.+++.+..
T Consensus 230 ~~~~vi~~~grl~~~K~~~~-li~A~~~l~~~~~-~~~---~~~~i~l~ivG~G~-~---~~~l~~~~~~~~-------- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGI-LLDALVAYEKSAA-TGP---KLPKLLCIITGKGP-L---KEKYLERIKELK-------- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHH-HHHHHHHHHHhhc-ccc---cCCCEEEEEEecCc-c---HHHHHHHHHHcC--------
Confidence 34567778899999999998 9998888754211 000 01138999999863 2 123333333222
Q ss_pred CCCcceEEEEcCC-ChhHHhhhcccccccccCCCCC-ccCCCcccchhhccCceEEEeecCccccccccccCcceeeccc
Q 003693 642 VNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (802)
Q Consensus 642 ~~~~lkVvFl~nY-~vslA~~iipgaDv~l~iS~a~-~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~ 719 (802)
+. .++|+.+| .-+-...++.+||++..++... .|.-|+.-+-+|.-|.+.|+|..|..-|+.++ .+||++++
T Consensus 293 l~---~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~--~~~G~lv~- 366 (415)
T cd03816 293 LK---KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH--GENGLVFG- 366 (415)
T ss_pred CC---cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC--CCCEEEEC-
Confidence 22 48888765 5555566999999997533211 24456667889999999999988877676654 36899996
Q ss_pred ccchHHHHh
Q 003693 720 VAEQVPKLR 728 (802)
Q Consensus 720 ~~~ev~~~~ 728 (802)
..+++.+..
T Consensus 367 d~~~la~~i 375 (415)
T cd03816 367 DSEELAEQL 375 (415)
T ss_pred CHHHHHHHH
Confidence 556676655
No 58
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.86 E-value=5e-05 Score=85.80 Aligned_cols=138 Identities=17% Similarity=0.145 Sum_probs=99.1
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~ 643 (802)
.+.++++.|+.++|+++. ++..+.++.+ . + .+.++++.|.+.. -.++.+++.++ .+.
T Consensus 222 ~~~il~vGrl~~~Kg~~~-ll~a~~~l~~--~-~-------~~~~l~ivG~G~~----~~~l~~~~~~~--------~l~ 278 (406)
T PRK15427 222 PLEIISVARLTEKKGLHV-AIEACRQLKE--Q-G-------VAFRYRILGIGPW----ERRLRTLIEQY--------QLE 278 (406)
T ss_pred CeEEEEEeCcchhcCHHH-HHHHHHHHHh--h-C-------CCEEEEEEECchh----HHHHHHHHHHc--------CCC
Confidence 456889999999999999 8888776643 2 1 2578999997632 12333333332 234
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCC----ccCCCcccchhhccCceEEEeecCccccccccccCcceeeccc
Q 003693 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (802)
Q Consensus 644 ~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~----~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~ 719 (802)
+ +|.|+.-..-+-...++.+||++..+|..+ +|..|+.-|=||.-|.+.|+|..|...|+.++ .++|+++..
T Consensus 279 ~--~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~--~~~G~lv~~ 354 (406)
T PRK15427 279 D--VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEA--DKSGWLVPE 354 (406)
T ss_pred C--eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcC--CCceEEeCC
Confidence 5 677765544444567889999999999853 58888889999999999999988887766543 368999975
Q ss_pred cc-chHHHHh
Q 003693 720 VA-EQVPKLR 728 (802)
Q Consensus 720 ~~-~ev~~~~ 728 (802)
.. +++.+..
T Consensus 355 ~d~~~la~ai 364 (406)
T PRK15427 355 NDAQALAQRL 364 (406)
T ss_pred CCHHHHHHHH
Confidence 43 6666665
No 59
>PHA01633 putative glycosyl transferase group 1
Probab=97.86 E-value=7.5e-05 Score=82.89 Aligned_cols=113 Identities=16% Similarity=0.125 Sum_probs=81.9
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
|+.+..+++.|++.+|++++ ++..+.++.+ . .|+. ....++++.|.+ .+.+ ..
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~-LI~A~~~L~~--~-~p~~---~~~i~l~ivG~~------------~~~~--------l~ 198 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDL-MLQVFNELNT--K-YPDI---AKKIHFFVISHK------------QFTQ--------LE 198 (335)
T ss_pred CCCeEEEEEeCCccccCHHH-HHHHHHHHHH--h-CCCc---cccEEEEEEcHH------------HHHH--------cC
Confidence 46788899999999999999 9998887754 2 2221 013567777721 1111 12
Q ss_pred CCCcceEEEEcCCC---hhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccc
Q 003693 642 VNSYLKVVFVPNYN---VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (802)
Q Consensus 642 ~~~~lkVvFl~nY~---vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi 705 (802)
+.+ +|.|+-.++ -+-...++++||+++.+|+ .|++|...+-||..|++.|++.-|...|+
T Consensus 199 l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei 261 (335)
T PHA01633 199 VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEF 261 (335)
T ss_pred CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceee
Confidence 355 677875432 3344578999999999999 89999999999999999999877765554
No 60
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.85 E-value=4.1e-05 Score=80.09 Aligned_cols=138 Identities=17% Similarity=0.061 Sum_probs=102.4
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
+++.+.++++.|+..+|+.++ ++..+..+.+ . + .+.+|++.|.+.+.+...+. ++....
T Consensus 185 ~~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~~~~~---~~~~~~------- 243 (359)
T cd03808 185 PEDDPVFLFVARLLKDKGIDE-LLEAARILKA--K-G-------PNVRLLLVGDGDEENPAAIL---EIEKLG------- 243 (359)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEcCCCcchhhHHH---HHHhcC-------
Confidence 356789999999999999998 8887776543 2 1 25899999999887766433 111111
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
... +|.|+.. .+-...++..||+...+|+ .|.+|++-+-+|..|.+.|+|-.|..-|+.++ .++|+++...
T Consensus 244 -~~~--~v~~~g~--~~~~~~~~~~adi~i~ps~--~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~--~~~g~~~~~~ 314 (359)
T cd03808 244 -LEG--RVEFLGF--RDDVPELLAAADVFVLPSY--REGLPRVLLEAMAMGRPVIATDVPGCREAVID--GVNGFLVPPG 314 (359)
T ss_pred -Ccc--eEEEeec--cccHHHHHHhccEEEecCc--ccCcchHHHHHHHcCCCEEEecCCCchhhhhc--CcceEEECCC
Confidence 133 5777655 3445578899999999999 59999999999999999999987777666543 3688888765
Q ss_pred -cchHHHHh
Q 003693 721 -AEQVPKLR 728 (802)
Q Consensus 721 -~~ev~~~~ 728 (802)
.+++.+..
T Consensus 315 ~~~~~~~~i 323 (359)
T cd03808 315 DAEALADAI 323 (359)
T ss_pred CHHHHHHHH
Confidence 36666665
No 61
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.83 E-value=0.0013 Score=80.11 Aligned_cols=189 Identities=12% Similarity=0.134 Sum_probs=118.3
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCC-CCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~-P~y~~aK~iIk~I~~va~~in~dp 640 (802)
++..+++.|.|++..|+..+ ++..+.++.+ . +|+.+ ..+++|+.|-+. .+-..-.++-+.+.+++..||.--
T Consensus 263 ~~~~~il~VgRl~~~Kgi~~-~l~A~~~ll~--~-~p~~~---~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~ 335 (726)
T PRK14501 263 RGRKIILSIDRLDYTKGIPR-RLLAFERFLE--K-NPEWR---GKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEF 335 (726)
T ss_pred CCCEEEEEecCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhc
Confidence 35678999999999999999 9999998855 4 45421 235676665321 111222445567777777775321
Q ss_pred CCCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcccchhhcc-----CceEEEeecCccccccccccCcce
Q 003693 641 EVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN-----GCLIIGTLDGANVEIRQEIGEENF 714 (802)
Q Consensus 641 ~~~~~lkVvFl~n-Y~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lN-----Gal~i~tlDGanvEi~e~~g~~n~ 714 (802)
...+...|+++.. ..-+---.++.+||+.+.+|. .|.=|+.-+-+|.- |.+.+|+..|+--|+. .+
T Consensus 336 ~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~------~~ 407 (726)
T PRK14501 336 GTVDWTPIHYFYRSLPFEELVALYRAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA------EA 407 (726)
T ss_pred CCCCcceEEEEeCCCCHHHHHHHHHhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchhHHhC------cC
Confidence 1122234666654 344444568999999999999 88888888888877 7788998888765543 25
Q ss_pred eeccccc-chHHHHhhhccCC-CC-CCChHHHHHHHHHHcCCCCCCC----hHHHHHHHhh
Q 003693 715 FLFGAVA-EQVPKLRKEREDG-LF-KPDPRFEEAKQFIRSGAFGSYD----YNPLLDSLEG 768 (802)
Q Consensus 715 fiFg~~~-~ev~~~~~~~~~~-~~-~~~~~l~~v~~~m~~g~fs~~~----f~~ly~~l~~ 768 (802)
+++.... +++.+.+. .... +- +.....+..++.+. .|+|.. |...|.....
T Consensus 408 llv~P~d~~~la~ai~-~~l~~~~~e~~~r~~~~~~~v~--~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 408 LLVNPNDIEGIAAAIK-RALEMPEEEQRERMQAMQERLR--RYDVHKWASDFLDELREAAE 465 (726)
T ss_pred eEECCCCHHHHHHHHH-HHHcCCHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHh
Confidence 6766544 67777663 3232 11 11122333444443 377773 7777777754
No 62
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.81 E-value=5.8e-05 Score=79.83 Aligned_cols=139 Identities=17% Similarity=0.155 Sum_probs=102.6
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
+++.+.++++.|+..+|+... ++.++.++.+ + + .+.++++.|.+.. .+.+.+++ +..
T Consensus 199 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~~~~--~-~-------~~~~l~i~G~~~~----~~~~~~~~----~~~---- 255 (374)
T cd03817 199 PEDEPVLLYVGRLAKEKNIDF-LIRAFARLLK--E-E-------PDVKLVIVGDGPE----REELEELA----REL---- 255 (374)
T ss_pred CCCCeEEEEEeeeecccCHHH-HHHHHHHHHH--h-C-------CCeEEEEEeCCch----HHHHHHHH----HHc----
Confidence 456788999999999999998 8877776543 1 1 2578999997642 12222232 222
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
...+ +|.|+...+-+-...++..||+.+++|. .|..|++-+-+|..|.+.|+|-.|+.-|+.+.. ++++++...
T Consensus 256 ~~~~--~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~--~~g~~~~~~ 329 (374)
T cd03817 256 GLAD--RVIFTGFVPREELPDYYKAADLFVFAST--TETQGLVLLEAMAAGLPVVAVDAPGLPDLVADG--ENGFLFPPG 329 (374)
T ss_pred CCCC--cEEEeccCChHHHHHHHHHcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCCCChhhheecC--ceeEEeCCC
Confidence 1244 6888888777777888999999999998 899999999999999999999999876665542 688888765
Q ss_pred cchHHHHh
Q 003693 721 AEQVPKLR 728 (802)
Q Consensus 721 ~~ev~~~~ 728 (802)
.+++.+..
T Consensus 330 ~~~~~~~i 337 (374)
T cd03817 330 DEALAEAL 337 (374)
T ss_pred CHHHHHHH
Confidence 54554444
No 63
>PLN02949 transferase, transferring glycosyl groups
Probab=97.70 E-value=0.0002 Score=82.66 Aligned_cols=147 Identities=17% Similarity=0.159 Sum_probs=102.3
Q ss_pred CcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCC-CCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAF-ATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 563 ~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~-P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
+....+++.||...|++.+ ++..+.++.+-. +. ...+..++++|.+. +.+..- .+.+.++++ +..
T Consensus 267 ~~~~il~vGR~~~~Kg~~l-lI~A~~~l~~~~---~~---~~~~~~LvIvG~~~~~~~~~~---~~eL~~la~----~l~ 332 (463)
T PLN02949 267 DPPYIISVAQFRPEKAHAL-QLEAFALALEKL---DA---DVPRPKLQFVGSCRNKEDEER---LQKLKDRAK----ELG 332 (463)
T ss_pred CCCEEEEEEeeeccCCHHH-HHHHHHHHHHhc---cc---cCCCcEEEEEeCCCCcccHHH---HHHHHHHHH----HcC
Confidence 4467788999999999999 999888875411 11 11246777777663 334321 112333332 223
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCc-ccccc-ccccCcceeeccc
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA-NVEIR-QEIGEENFFLFGA 719 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGa-nvEi~-e~~g~~n~fiFg~ 719 (802)
+.+ +|.|+.+-.-+--..++..||+.+.+|. .|.-|..-+=||..|.++|++..|. ..|+. ++.+..+||++.
T Consensus 333 L~~--~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~- 407 (463)
T PLN02949 333 LDG--DVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT- 407 (463)
T ss_pred CCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC-
Confidence 466 7999988765666668899999999998 8999999999999999999998764 33553 334456899986
Q ss_pred ccchHHHHh
Q 003693 720 VAEQVPKLR 728 (802)
Q Consensus 720 ~~~ev~~~~ 728 (802)
+.+++.+..
T Consensus 408 ~~~~la~ai 416 (463)
T PLN02949 408 TVEEYADAI 416 (463)
T ss_pred CHHHHHHHH
Confidence 556666655
No 64
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.54 E-value=0.00038 Score=79.06 Aligned_cols=150 Identities=17% Similarity=0.151 Sum_probs=105.7
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
++...++++.|+...|+..+ ++..+..+.+ . .|.. ...+.+++++|.+...+.. +..+.+.++++.. .
T Consensus 235 ~~~~~il~vgr~~~~K~~~~-li~A~~~l~~--~-~~~~--~~~~~~lvivG~~~~~~~~--~~~~~L~~~~~~l----~ 302 (419)
T cd03806 235 TRENQILSIAQFRPEKNHPL-QLRAFAKLLK--R-LPEE--IKEKIKLVLIGSCRNEDDE--KRVEDLKLLAKEL----G 302 (419)
T ss_pred cCCcEEEEEEeecCCCCHHH-HHHHHHHHHH--h-Cccc--ccCceEEEEEcCCCCcccH--HHHHHHHHHHHHh----C
Confidence 34578999999999999999 9998887765 2 2210 0124788888876544321 1222344444332 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecC-cccccccc-ccCcceeeccc
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQE-IGEENFFLFGA 719 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDG-anvEi~e~-~g~~n~fiFg~ 719 (802)
+.+ +|.|+.+-+-+--..++..||+.+.+|. .|.-|.+-.=+|..|.++|++-.| ...|+.+. .+.++||+|.
T Consensus 303 l~~--~V~f~g~v~~~~l~~~l~~adv~v~~s~--~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~- 377 (419)
T cd03806 303 LED--KVEFVVNAPFEELLEELSTASIGLHTMW--NEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS- 377 (419)
T ss_pred CCC--eEEEecCCCHHHHHHHHHhCeEEEECCc--cCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-
Confidence 456 7999987666666788999999999999 799999999999999999999875 34445431 1247899985
Q ss_pred ccchHHHHh
Q 003693 720 VAEQVPKLR 728 (802)
Q Consensus 720 ~~~ev~~~~ 728 (802)
..+++.+..
T Consensus 378 d~~~la~ai 386 (419)
T cd03806 378 TAEEYAEAI 386 (419)
T ss_pred CHHHHHHHH
Confidence 556776665
No 65
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.53 E-value=0.00015 Score=77.91 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=86.7
Q ss_pred ceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 003693 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (802)
Q Consensus 565 lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~ 644 (802)
.+++++.|+.++|+.++ ++..+..+ .. +.++++.|.+.......+.+.+ . . ...+
T Consensus 194 ~~i~~~G~~~~~Kg~~~-li~a~~~l---~~----------~~~l~ivG~~~~~~~~~~~~~~----~---~----~~~~ 248 (363)
T cd04955 194 RYYLLVGRIVPENNIDD-LIEAFSKS---NS----------GKKLVIVGNADHNTPYGKLLKE----K---A----AADP 248 (363)
T ss_pred cEEEEEecccccCCHHH-HHHHHHhh---cc----------CceEEEEcCCCCcchHHHHHHH----H---h----CCCC
Confidence 45678999999999998 77665432 11 4689999988544333222221 1 1 1234
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCc-cCCCcccchhhccCceEEEeecCccccccccccCcceeeccccc
Q 003693 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGM-EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (802)
Q Consensus 645 ~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~-EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~ 721 (802)
+|.|+....-.-....+..||+...+|. . |..|.+-+=+|..|.+.|+|..|...|+.+ +++++|....
T Consensus 249 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~--~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~----~~g~~~~~~~ 318 (363)
T cd04955 249 --RIIFVGPIYDQELLELLRYAALFYLHGH--SVGGTNPSLLEAMAYGCPVLASDNPFNREVLG----DKAIYFKVGD 318 (363)
T ss_pred --cEEEccccChHHHHHHHHhCCEEEeCCc--cCCCCChHHHHHHHcCCCEEEecCCccceeec----CCeeEecCch
Confidence 6777765444444566778899999998 6 999999999999999999999998766554 3677775433
No 66
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=97.51 E-value=0.00037 Score=74.13 Aligned_cols=132 Identities=13% Similarity=0.039 Sum_probs=93.8
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~ 643 (802)
...++++.|+.+.|++++ ++.... . ....+++.|.+.......+ .+..... +.
T Consensus 171 ~~~i~~~Gr~~~~Kg~~~-li~~~~------~---------~~~~l~i~G~~~~~~~~~~----~~~~~~~-------~~ 223 (335)
T cd03802 171 GDYLLFLGRISPEKGPHL-AIRAAR------R---------AGIPLKLAGPVSDPDYFYR----EIAPELL-------DG 223 (335)
T ss_pred CCEEEEEEeeccccCHHH-HHHHHH------h---------cCCeEEEEeCCCCHHHHHH----HHHHhcc-------cC
Confidence 346789999999999998 665421 1 1467999998864433211 1111110 24
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccccch
Q 003693 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQ 723 (802)
Q Consensus 644 ~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~~e 723 (802)
+ +|.|+..-+-.-...+++++|+.+++|+ ..|.+|++-+=||..|.+.|+|-.|...|+.+. ..|++++.. .++
T Consensus 224 ~--~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~--~~~g~l~~~-~~~ 297 (335)
T cd03802 224 P--DIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVED--GVTGFLVDS-VEE 297 (335)
T ss_pred C--cEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeC--CCcEEEeCC-HHH
Confidence 5 6888877555555678899999999997 249999999999999999999988887765543 248999976 666
Q ss_pred HHHHh
Q 003693 724 VPKLR 728 (802)
Q Consensus 724 v~~~~ 728 (802)
+.+..
T Consensus 298 l~~~l 302 (335)
T cd03802 298 LAAAV 302 (335)
T ss_pred HHHHH
Confidence 66655
No 67
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.47 E-value=0.0016 Score=80.05 Aligned_cols=152 Identities=13% Similarity=0.089 Sum_probs=95.2
Q ss_pred CcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCCcC
Q 003693 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 563 ~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y-~~aK~iIk~I~~va~~in~dp~ 641 (802)
+..+++.|.|++.-|+..+ +|..++++.+ . .|+.+ ..+++|..+-..-++ ..-.++-+.+.+++..||..-.
T Consensus 278 ~~~lIl~VgRLd~~KGi~~-lL~Afe~lL~--~-~P~~~---~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g 350 (797)
T PLN03063 278 GRKVILGVDRLDMIKGIPQ-KYLAFEKFLE--E-NPEWR---DKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFG 350 (797)
T ss_pred CCeEEEEecccccccCHHH-HHHHHHHHHH--h-Ccccc---CcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccc
Confidence 4568889999999999999 9999988865 4 45431 135555333222121 2223456667777666754211
Q ss_pred CCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcccchhhccCc-----eEEEeecCccccccccccCccee
Q 003693 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC-----LIIGTLDGANVEIRQEIGEENFF 715 (802)
Q Consensus 642 ~~~~lkVvFl~n-Y~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGa-----l~i~tlDGanvEi~e~~g~~n~f 715 (802)
..+..-|+++.. .+-.---.++.+||+++-+|. .|.=|+--+-+|.-|. +.+|...|+-.+ .| .+++
T Consensus 351 ~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSl--rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~----l~-~~al 423 (797)
T PLN03063 351 SVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSL--RDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS----LG-AGAL 423 (797)
T ss_pred cCCCceeEEecCCCCHHHHHHHHHhCCEEEeCcc--ccccCcchhhHheeecCCCCCEEeeCCcCchhh----hc-CCeE
Confidence 122334666654 233333368899999999999 8877777777777774 667767775432 22 3567
Q ss_pred eccccc-chHHHHh
Q 003693 716 LFGAVA-EQVPKLR 728 (802)
Q Consensus 716 iFg~~~-~ev~~~~ 728 (802)
+..... +++.+.+
T Consensus 424 lVnP~D~~~lA~AI 437 (797)
T PLN03063 424 LVNPWNITEVSSAI 437 (797)
T ss_pred EECCCCHHHHHHHH
Confidence 776554 6676666
No 68
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.44 E-value=0.00047 Score=71.80 Aligned_cols=131 Identities=18% Similarity=0.113 Sum_probs=94.6
Q ss_pred CCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 003693 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (802)
Q Consensus 560 vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~d 639 (802)
.+++....+++.|+.+.|+..+ ++..+..+.. . ..+.++++.|.+...... .+++..+
T Consensus 185 ~~~~~~~i~~~g~~~~~k~~~~-~i~~~~~l~~--~--------~~~~~l~i~G~~~~~~~~----~~~~~~~------- 242 (353)
T cd03811 185 IPPDGPVILAVGRLSPQKGFDT-LIRAFALLRK--E--------GPDARLVILGDGPLREEL----EALAKEL------- 242 (353)
T ss_pred CCCCceEEEEEecchhhcChHH-HHHHHHHhhh--c--------CCCceEEEEcCCccHHHH----HHHHHhc-------
Confidence 3466789999999999999998 8877766543 1 126789999976543222 1222222
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccc
Q 003693 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (802)
Q Consensus 640 p~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~ 719 (802)
...+ +|.|+... +-...++..||+.+.+|+ .|..|++-+-+|..|.+.|+|-.|..-|+.++ ..+|+++..
T Consensus 243 -~~~~--~v~~~g~~--~~~~~~~~~~d~~i~ps~--~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~--~~~g~~~~~ 313 (353)
T cd03811 243 -GLAD--RVHFLGFQ--SNPYPYLKAADLFVLSSR--YEGFPNVLLEAMALGTPVVATDCPGPREILED--GENGLLVPV 313 (353)
T ss_pred -CCCc--cEEEeccc--CCHHHHHHhCCEEEeCcc--cCCCCcHHHHHHHhCCCEEEcCCCChHHHhcC--CCceEEECC
Confidence 1234 56666543 334568999999999999 79999999999999999999988877665543 367888877
Q ss_pred cc
Q 003693 720 VA 721 (802)
Q Consensus 720 ~~ 721 (802)
..
T Consensus 314 ~~ 315 (353)
T cd03811 314 GD 315 (353)
T ss_pred CC
Confidence 66
No 69
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.41 E-value=0.00059 Score=72.21 Aligned_cols=137 Identities=12% Similarity=0.092 Sum_probs=97.4
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
+++.+.++++.|+..+|+..+ ++..+.++.+. .+.++++.|.+..... +.+++.. .
T Consensus 217 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~~l~~~-----------~~~~l~i~G~~~~~~~----~~~~~~~--------~ 272 (394)
T cd03794 217 LDDKFVVLYAGNIGRAQGLDT-LLEAAALLKDR-----------PDIRFLIVGDGPEKEE----LKELAKA--------L 272 (394)
T ss_pred CCCcEEEEEecCcccccCHHH-HHHHHHHHhhc-----------CCeEEEEeCCcccHHH----HHHHHHH--------c
Confidence 356789999999999999998 88777655331 2678999997654321 1111111 1
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCC-Ccc----cchhhccCceEEEeecCccccccccccCccee
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEAS-GTS----NMKFSLNGCLIIGTLDGANVEIRQEIGEENFF 715 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EAS-GTs----~MKa~lNGal~i~tlDGanvEi~e~~g~~n~f 715 (802)
.. . +|.|+...+-+-...++..||+...+|. .|.. |.+ -+-+|..|.+.|+|-.|..-|+.... ++++
T Consensus 273 ~~-~--~v~~~g~~~~~~~~~~~~~~di~i~~~~--~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~--~~g~ 345 (394)
T cd03794 273 GL-D--NVTFLGRVPKEELPELLAAADVGLVPLK--PGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEA--GAGL 345 (394)
T ss_pred CC-C--cEEEeCCCChHHHHHHHHhhCeeEEecc--CcccccccCchHHHHHHHCCCcEEEecCCCchhhhccC--Ccce
Confidence 11 2 5889987666677788899999999999 5554 333 47899999999999999876655442 6888
Q ss_pred eccc-ccchHHHHh
Q 003693 716 LFGA-VAEQVPKLR 728 (802)
Q Consensus 716 iFg~-~~~ev~~~~ 728 (802)
+|.. ..+++.+..
T Consensus 346 ~~~~~~~~~l~~~i 359 (394)
T cd03794 346 VVPPGDPEALAAAI 359 (394)
T ss_pred EeCCCCHHHHHHHH
Confidence 8876 447776666
No 70
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.33 E-value=0.00049 Score=74.80 Aligned_cols=124 Identities=17% Similarity=0.187 Sum_probs=93.6
Q ss_pred ceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 003693 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (802)
Q Consensus 565 lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~ 644 (802)
.+++++.|+..+|+++. ++..+.++ |..+++.|.+... +. ++. ...+
T Consensus 196 ~~il~~G~~~~~K~~~~-li~a~~~~---------------~~~l~ivG~g~~~----~~-l~~------------~~~~ 242 (351)
T cd03804 196 DYYLSVGRLVPYKRIDL-AIEAFNKL---------------GKRLVVIGDGPEL----DR-LRA------------KAGP 242 (351)
T ss_pred CEEEEEEcCccccChHH-HHHHHHHC---------------CCcEEEEECChhH----HH-HHh------------hcCC
Confidence 45789999999999998 76654321 4578999976431 11 111 1134
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccccc-ch
Q 003693 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA-EQ 723 (802)
Q Consensus 645 ~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~-~e 723 (802)
+|.|+..-+-+-...++.+||+.+.+|+ |..|+.-+-+|..|.+.|++..|...|+.++ .++|+++.... ++
T Consensus 243 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~--~~~G~~~~~~~~~~ 315 (351)
T cd03804 243 --NVTFLGRVSDEELRDLYARARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVID--GVTGILFEEQTVES 315 (351)
T ss_pred --CEEEecCCCHHHHHHHHHhCCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceeeC--CCCEEEeCCCCHHH
Confidence 6999998877778889999999999987 9999999999999999999998887766543 26899986544 66
Q ss_pred HHHHh
Q 003693 724 VPKLR 728 (802)
Q Consensus 724 v~~~~ 728 (802)
+.+..
T Consensus 316 la~~i 320 (351)
T cd03804 316 LAAAV 320 (351)
T ss_pred HHHHH
Confidence 66655
No 71
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.28 E-value=0.0011 Score=69.93 Aligned_cols=134 Identities=16% Similarity=0.090 Sum_probs=100.8
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
.+.+..+++.|+...|+.++ ++..+..+.. . ...|++.|.+.+.+..-+.. .
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~--~----------~~~l~i~G~~~~~~~~~~~~---------------~ 240 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDL-LLEAFKRLPR--G----------DIELVIVGNGLELEEESYEL---------------E 240 (359)
T ss_pred CCceEEEEEecCccccCHHH-HHHHHHHHHh--c----------CcEEEEEcCchhhhHHHHhh---------------c
Confidence 45677889999999999998 8777766533 1 46899999887766552221 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccccc
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~ 721 (802)
... +|.|+...+-.....++.+||+..++|+ ..|.+|+.-+-+|..|.+.|+|-.|..-|+.+. ..++++|....
T Consensus 241 ~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps~-~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~--~~~g~~~~~~d 315 (359)
T cd03823 241 GDP--RVEFLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELVRD--GVNGLLFPPGD 315 (359)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEEcCc-ccCCCChHHHHHHHCCCCEEECCCCCHHHHhcC--CCcEEEECCCC
Confidence 133 6888888877777889999999999986 248899999999999999999988876655443 24788987763
Q ss_pred -chHHHHh
Q 003693 722 -EQVPKLR 728 (802)
Q Consensus 722 -~ev~~~~ 728 (802)
+++.+..
T Consensus 316 ~~~l~~~i 323 (359)
T cd03823 316 AEDLAAAL 323 (359)
T ss_pred HHHHHHHH
Confidence 6666665
No 72
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.26 E-value=0.00049 Score=71.65 Aligned_cols=136 Identities=15% Similarity=0.045 Sum_probs=93.8
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
.+....+++.|+...|+.+. ++..+..+.+ . . .+.++++.|.+..... +.+..... .
T Consensus 176 ~~~~~i~~~g~~~~~K~~~~-l~~~~~~l~~--~-~-------~~~~l~i~G~~~~~~~--------~~~~~~~~----~ 232 (348)
T cd03820 176 LKSKRILAVGRLVPQKGFDL-LIEAWAKIAK--K-H-------PDWKLRIVGDGPEREA--------LEALIKEL----G 232 (348)
T ss_pred CCCcEEEEEEeeccccCHHH-HHHHHHHHHh--c-C-------CCeEEEEEeCCCCHHH--------HHHHHHHc----C
Confidence 34567889999999999998 8887776644 2 1 2578999997654322 22222222 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccc-cccccccCcceeecccc
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANV-EIRQEIGEENFFLFGAV 720 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanv-Ei~e~~g~~n~fiFg~~ 720 (802)
+.. +|.|... .+-...++..||+...+|+ .|..|++-+-+|..|.+.|++-.|... ++.+. ..+|++|...
T Consensus 233 ~~~--~v~~~g~--~~~~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~--~~~g~~~~~~ 304 (348)
T cd03820 233 LED--RVILLGF--TKNIEEYYAKASIFVLTSR--FEGFPMVLLEAMAFGLPVISFDCPTGPSEIIED--GVNGLLVPNG 304 (348)
T ss_pred CCC--eEEEcCC--cchHHHHHHhCCEEEeCcc--ccccCHHHHHHHHcCCCEEEecCCCchHhhhcc--CcceEEeCCC
Confidence 234 4555554 4455678889999999999 799999999999999999998655443 22221 2489999765
Q ss_pred c-chHHHHh
Q 003693 721 A-EQVPKLR 728 (802)
Q Consensus 721 ~-~ev~~~~ 728 (802)
. +++.+..
T Consensus 305 ~~~~~~~~i 313 (348)
T cd03820 305 DVEALAEAL 313 (348)
T ss_pred CHHHHHHHH
Confidence 4 6666665
No 73
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=97.26 E-value=0.012 Score=68.78 Aligned_cols=157 Identities=13% Similarity=0.115 Sum_probs=103.8
Q ss_pred HHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCC-CHHHHHHHHHHH
Q 003693 552 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFAT-YTNAKRIVKLVN 630 (802)
Q Consensus 552 i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~-y~~aK~iIk~I~ 630 (802)
+++++| +..++..|-|+..-|+... .|...+++++ + +|+.+ ..+++|..|.+.-. -..-+++.+.|.
T Consensus 278 lr~~~~-----~~kiIl~VDRLDy~KGI~~-kl~Afe~~L~--~-~Pe~~---gkv~Lvqi~~psr~~v~~y~~l~~~v~ 345 (487)
T TIGR02398 278 IRSELA-----GVKLILSAERVDYTKGILE-KLNAYERLLE--R-RPELL---GKVTLVTACVPAASGMTIYDELQGQIE 345 (487)
T ss_pred HHHHcC-----CceEEEEecccccccCHHH-HHHHHHHHHH--h-Ccccc---CceEEEEEeCCCcccchHHHHHHHHHH
Confidence 444656 4568889999999999999 9999999865 5 56542 24677766655422 233356778888
Q ss_pred HHHHHhcCCcCCCCcceEEEEcCC-ChhHHhhhcccccccccCCCCCccCCCcccchhh-----ccCceEEEeecCcccc
Q 003693 631 DVGEVVNTDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFS-----LNGCLIIGTLDGANVE 704 (802)
Q Consensus 631 ~va~~in~dp~~~~~lkVvFl~nY-~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~-----lNGal~i~tlDGanvE 704 (802)
+++..||..=...+.--|+++.++ .-+.--.++.+|||.+-+|+ .|.=++--.-++ ..|+|.+|-..|+-.+
T Consensus 346 ~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~ 423 (487)
T TIGR02398 346 QAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVE 423 (487)
T ss_pred HHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhHHhhhcCCCCCEEEeccccchhh
Confidence 888888765333344446666664 55555568999999999999 554443333322 3689999999998633
Q ss_pred ccccccCcceeeccccc-chHHHHh
Q 003693 705 IRQEIGEENFFLFGAVA-EQVPKLR 728 (802)
Q Consensus 705 i~e~~g~~n~fiFg~~~-~ev~~~~ 728 (802)
.. ...+..... +++.+.+
T Consensus 424 l~------~AllVNP~d~~~~A~ai 442 (487)
T TIGR02398 424 LK------GALLTNPYDPVRMDETI 442 (487)
T ss_pred cC------CCEEECCCCHHHHHHHH
Confidence 21 234444444 6666655
No 74
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.22 E-value=0.00095 Score=70.84 Aligned_cols=131 Identities=17% Similarity=0.159 Sum_probs=97.8
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
++.+.++++.|+...|+... ++..+..+.. . .+..+++.|.+.-. . -++ .
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~-~i~~~~~l~~----------~-~~~~l~i~G~~~~~-~----~~~-------------~ 244 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEA-LLDADLPLRR----------R-PPVRLVIVGDGPAR-A----RLE-------------A 244 (364)
T ss_pred CCCeEEEEEeccccccCHHH-HHHHHHHhhh----------c-CCceEEEEeCCchH-H----HHh-------------c
Confidence 45678899999999999988 7777665432 1 25789999964321 1 111 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccccc
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~ 721 (802)
..+ +|.|+.-....-...++.+||+.+.+|. .|..|+.-+=+|.-|.+.|++-.|...|+.++ .+++++|....
T Consensus 245 ~~~--~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~--~~~g~~~~~~~ 318 (364)
T cd03814 245 RYP--NVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTD--GENGLLVEPGD 318 (364)
T ss_pred cCC--cEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcC--CcceEEcCCCC
Confidence 133 6888876667777789999999999998 79999999999999999999988887766554 26888887665
Q ss_pred -chHHHHh
Q 003693 722 -EQVPKLR 728 (802)
Q Consensus 722 -~ev~~~~ 728 (802)
+++.+..
T Consensus 319 ~~~l~~~i 326 (364)
T cd03814 319 AEAFAAAL 326 (364)
T ss_pred HHHHHHHH
Confidence 5566555
No 75
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.20 E-value=0.0012 Score=74.46 Aligned_cols=139 Identities=19% Similarity=0.139 Sum_probs=95.3
Q ss_pred CcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 003693 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (802)
Q Consensus 563 ~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~ 642 (802)
+.+.++.+.|+...||.++ ++..+.++.+ . .|+ ....+++.|.+... ..+ .++++.. ..
T Consensus 229 ~~~~il~~Grl~~~Kg~~~-li~a~~~l~~--~-~p~-----~~l~~~iiG~g~~~----~~l----~~~~~~~----~~ 287 (407)
T cd04946 229 DTLRIVSCSYLVPVKRVDL-IIKALAALAK--A-RPS-----IKIKWTHIGGGPLE----DTL----KELAESK----PE 287 (407)
T ss_pred CCEEEEEeeccccccCHHH-HHHHHHHHHH--h-CCC-----ceEEEEEEeCchHH----HHH----HHHHHhc----CC
Confidence 3567899999999999998 8888877754 2 232 14567777765421 122 2222211 12
Q ss_pred CCcceEEEEcCCCh-hHHhhhc-ccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccc-
Q 003693 643 NSYLKVVFVPNYNV-SVAELLI-PGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA- 719 (802)
Q Consensus 643 ~~~lkVvFl~nY~v-slA~~ii-pgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~- 719 (802)
.+ +|.|+--.+- .+.+.+- ..||+..++|. .|.-|++=|-||..|.+.|+|-.|...|+.++ .+||+++..
T Consensus 288 ~~--~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~--~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~--~~~G~l~~~~ 361 (407)
T cd04946 288 NI--SVNFTGELSNSEVYKLYKENPVDVFVNLSE--SEGLPVSIMEAMSFGIPVIATNVGGTPEIVDN--GGNGLLLSKD 361 (407)
T ss_pred Cc--eEEEecCCChHHHHHHHhhcCCCEEEeCCc--cccccHHHHHHHHcCCCEEeCCCCCcHHHhcC--CCcEEEeCCC
Confidence 34 6777654433 3444443 35899999998 99999999999999999999998988766543 248999865
Q ss_pred -ccchHHHHh
Q 003693 720 -VAEQVPKLR 728 (802)
Q Consensus 720 -~~~ev~~~~ 728 (802)
+.+++.+..
T Consensus 362 ~~~~~la~~I 371 (407)
T cd04946 362 PTPNELVSSL 371 (407)
T ss_pred CCHHHHHHHH
Confidence 347777766
No 76
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.12 E-value=0.00098 Score=77.82 Aligned_cols=122 Identities=18% Similarity=0.116 Sum_probs=88.6
Q ss_pred ceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCCC
Q 003693 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (802)
Q Consensus 565 lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~~ 644 (802)
..++++.|+.+.|+.+. ++.++.++.+ . . .+.++++.|.+.. . . .+.++++.. .+.+
T Consensus 320 ~~il~vGrl~~~Kg~~~-li~A~~~l~~--~-~-------p~~~l~i~G~G~~---~-~----~l~~~i~~~----~l~~ 376 (500)
T TIGR02918 320 FSIITASRLAKEKHIDW-LVKAVVKAKK--S-V-------PELTFDIYGEGGE---K-Q----KLQKIINEN----QAQD 376 (500)
T ss_pred eEEEEEeccccccCHHH-HHHHHHHHHh--h-C-------CCeEEEEEECchh---H-H----HHHHHHHHc----CCCC
Confidence 46889999999999999 8888777654 2 2 2578888887642 1 1 233333221 1245
Q ss_pred cceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecC-ccccccccccCcceeecc
Q 003693 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFG 718 (802)
Q Consensus 645 ~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDG-anvEi~e~~g~~n~fiFg 718 (802)
+|.|+. + +.++ .+++.||++..+|+ .|+.|.+-|=||..|.+.|+|-.| ...|+.+. ..|||++.
T Consensus 377 --~V~f~G-~-~~~~-~~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~--g~nG~lv~ 442 (500)
T TIGR02918 377 --YIHLKG-H-RNLS-EVYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED--NKNGYLIP 442 (500)
T ss_pred --eEEEcC-C-CCHH-HHHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccC--CCCEEEEe
Confidence 566665 5 3565 46899999999999 999999999999999999999754 56565543 37999996
No 77
>PRK10125 putative glycosyl transferase; Provisional
Probab=96.98 E-value=0.0013 Score=74.55 Aligned_cols=157 Identities=14% Similarity=0.020 Sum_probs=96.2
Q ss_pred CCcceeeccccchhhhh--hhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 003693 562 PNSLFDIQVKRIHEYKR--QLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (802)
Q Consensus 562 p~~lfd~~vkR~heYKR--q~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~d 639 (802)
++...++++.|...+|| .+. ++..+.+ +. .+.++++.|++.|...
T Consensus 239 ~~~~~il~v~~~~~~~~Kg~~~-li~A~~~---l~----------~~~~L~ivG~g~~~~~------------------- 285 (405)
T PRK10125 239 QGKPKIAVVAHDLRYDGKTDQQ-LVREMMA---LG----------DKIELHTFGKFSPFTA------------------- 285 (405)
T ss_pred CCCCEEEEEEeccccCCccHHH-HHHHHHh---CC----------CCeEEEEEcCCCcccc-------------------
Confidence 45566777888655554 444 4443332 21 1468888888655321
Q ss_pred cCCCCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecc
Q 003693 640 PEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (802)
Q Consensus 640 p~~~~~lkVvFl~n-Y~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg 718 (802)
. +|.++.- .+..--..++++||++..||+ .|.-|+.-+=||.-|++.|+|--|...|+.+. ++|+++.
T Consensus 286 ----~--~v~~~g~~~~~~~l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~---~~G~lv~ 354 (405)
T PRK10125 286 ----G--NVVNHGFETDKRKLMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQK---SGGKTVS 354 (405)
T ss_pred ----c--ceEEecCcCCHHHHHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEeC---CcEEEEC
Confidence 1 2333321 133333457899999999999 99999999999999999999999988776543 5899997
Q ss_pred ccc-chHHHHhhhccCCCCCC--ChHHHHHHHHHHcCCCCCCC----hHHHHHHH
Q 003693 719 AVA-EQVPKLRKEREDGLFKP--DPRFEEAKQFIRSGAFGSYD----YNPLLDSL 766 (802)
Q Consensus 719 ~~~-~ev~~~~~~~~~~~~~~--~~~l~~v~~~m~~g~fs~~~----f~~ly~~l 766 (802)
... +++..+. +..+ ... ..........+... ||+.. |.++|+.|
T Consensus 355 ~~d~~~La~~~-~~~~--~~~~~~~~~~~~r~~~~~~-fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 355 EEEVLQLAQLS-KPEI--AQAVFGTTLAEFSQRSRAA-YSGQQMLEEYVNFYQNL 405 (405)
T ss_pred CCCHHHHHhcc-CHHH--HHHhhhhHHHHHHHHHHHh-CCHHHHHHHHHHHHHhC
Confidence 655 4554422 1000 010 00112233334444 88873 88888753
No 78
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=96.93 E-value=0.002 Score=70.56 Aligned_cols=134 Identities=22% Similarity=0.158 Sum_probs=93.8
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~ 643 (802)
...++++.|+...|+.+. ++.++.++.. . +| ...+++.|.+...... -+++ + +..+.
T Consensus 204 ~~~i~~vgrl~~~K~~~~-li~a~~~l~~--~-~~-------~~~l~i~G~g~~~~~~----~~~~----~----~~~~~ 260 (372)
T cd04949 204 PHKIITVARLAPEKQLDQ-LIKAFAKVVK--Q-VP-------DATLDIYGYGDEEEKL----KELI----E----ELGLE 260 (372)
T ss_pred CCeEEEEEccCcccCHHH-HHHHHHHHHH--h-CC-------CcEEEEEEeCchHHHH----HHHH----H----HcCCc
Confidence 456789999999999999 8888887754 2 22 4688899987653222 1122 1 12334
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecC-ccccccccccCcceeeccccc-
Q 003693 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFGAVA- 721 (802)
Q Consensus 644 ~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDG-anvEi~e~~g~~n~fiFg~~~- 721 (802)
+ .|.|. +|.-. ...++..||+...+|+ .|+.|.+-+-||..|.+.|++-.| ..-|+.+. .+||+++....
T Consensus 261 ~--~v~~~-g~~~~-~~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~--~~~G~lv~~~d~ 332 (372)
T cd04949 261 D--YVFLK-GYTRD-LDEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIED--GENGYLVPKGDI 332 (372)
T ss_pred c--eEEEc-CCCCC-HHHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHccc--CCCceEeCCCcH
Confidence 4 45554 45444 4567889999999999 899999999999999999998765 34343332 37899998644
Q ss_pred chHHHHh
Q 003693 722 EQVPKLR 728 (802)
Q Consensus 722 ~ev~~~~ 728 (802)
+++.+..
T Consensus 333 ~~la~~i 339 (372)
T cd04949 333 EALAEAI 339 (372)
T ss_pred HHHHHHH
Confidence 6666655
No 79
>PHA01630 putative group 1 glycosyl transferase
Probab=96.59 E-value=0.0062 Score=67.44 Aligned_cols=116 Identities=11% Similarity=0.006 Sum_probs=79.9
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~ 643 (802)
.++.++++|++++|+.++ ++..+.++.+ . . .+..+++.|.. +. . . ++. .+.
T Consensus 142 ~~vl~~~g~~~~~Kg~d~-Li~A~~~l~~--~-~-------~~~~llivG~~-~~--~-~---~l~-----------~~~ 192 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDI-VVKIFHELQN--E-G-------YDFYFLIKSSN-ML--D-P---RLF-----------GLN 192 (331)
T ss_pred CEEEEEeccccccCCHHH-HHHHHHHHHh--h-C-------CCEEEEEEeCc-cc--c-h---hhc-----------ccc
Confidence 457788999999999999 8888776643 2 1 25788888832 11 1 0 010 012
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeec
Q 003693 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (802)
Q Consensus 644 ~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiF 717 (802)
+ ...++ .-+--..++++||++..+|+ .|+-|..-+=||..|.+.|+|-.|..-|+.++ .+|+|++
T Consensus 193 ~--~~~~v---~~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~--~~ng~lv 257 (331)
T PHA01630 193 G--VKTPL---PDDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLS--NLDVYWI 257 (331)
T ss_pred c--eeccC---CHHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccC--CCceEEe
Confidence 2 11112 22344567899999999999 79999999999999999999999987665443 2566665
No 80
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=96.31 E-value=0.015 Score=64.14 Aligned_cols=133 Identities=11% Similarity=0.031 Sum_probs=87.9
Q ss_pred cceeeccccchhh--hhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 564 SLFDIQVKRIHEY--KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 564 ~lfd~~vkR~heY--KRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
...++++.|+..+ |+... ++..+.+ ++. +..+++.|.+.. ... +.+.++.. .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~-l~~a~~~---~~~----------~~~l~ivG~g~~-~~~-------l~~~~~~~----~ 233 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKE-LFDGLSQ---TTG----------EWQLHIIGDGSD-FEK-------CKAYSREL----G 233 (359)
T ss_pred CcEEEEEEEEecccCcCHHH-HHHHHHh---hCC----------CeEEEEEeCCcc-HHH-------HHHHHHHc----C
Confidence 4667888898755 66655 5544332 211 578999998742 222 22333222 2
Q ss_pred CCCcceEEEEcCCCh--hHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEee-cCccccccccccCcceeecc
Q 003693 642 VNSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL-DGANVEIRQEIGEENFFLFG 718 (802)
Q Consensus 642 ~~~~lkVvFl~nY~v--slA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tl-DGanvEi~e~~g~~n~fiFg 718 (802)
+++ +|.|+.--+. ......+..||+...+|+ .|+.|..-.=||..|.+.|+|- .|...|+.+. ..+|+++.
T Consensus 234 l~~--~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~--~~~G~lv~ 307 (359)
T PRK09922 234 IEQ--RIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP--GLNGELYT 307 (359)
T ss_pred CCC--eEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccC--CCceEEEC
Confidence 355 6777754333 344556778999999999 8999999999999999999987 5655555543 35899986
Q ss_pred ccc-chHHHHh
Q 003693 719 AVA-EQVPKLR 728 (802)
Q Consensus 719 ~~~-~ev~~~~ 728 (802)
... +++.+..
T Consensus 308 ~~d~~~la~~i 318 (359)
T PRK09922 308 PGNIDEFVGKL 318 (359)
T ss_pred CCCHHHHHHHH
Confidence 543 6666655
No 81
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.22 E-value=0.016 Score=64.84 Aligned_cols=134 Identities=8% Similarity=0.015 Sum_probs=84.4
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHH-HHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCc
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYR-YKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~-y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp 640 (802)
++..+++++.|+..+|+.+. ++..+.. +..++... .+.+|++.|.+.. . + +.+++.
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~-l~~~~~~~~~~l~~~~-------p~~~l~ivG~g~~---~--~----~~~l~~------ 278 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDA-VVWFAERVFPAVRARR-------PAAEFYIVGAKPS---P--A----VRALAA------ 278 (397)
T ss_pred CCCcEEEEEEecCCccCHHH-HHHHHHHHHHHHHHHC-------CCcEEEEECCCCh---H--H----HHHhcc------
Confidence 45678899999999999987 6544433 22333201 2478999998743 1 1 222221
Q ss_pred CCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~ 720 (802)
.. +|.|+..-+ .+ ..++++||+...||+.+ |..|+.-+=+|..|.+.|+|-.|... +. .+.++++++..+
T Consensus 279 --~~--~V~~~G~v~-~~-~~~~~~adv~v~Ps~~~-eG~~~~~lEAma~G~PVV~t~~~~~~-i~--~~~~~g~lv~~~ 348 (397)
T TIGR03087 279 --LP--GVTVTGSVA-DV-RPYLAHAAVAVAPLRIA-RGIQNKVLEAMAMAKPVVASPEAAEG-ID--ALPGAELLVAAD 348 (397)
T ss_pred --CC--CeEEeeecC-CH-HHHHHhCCEEEeccccc-CCcccHHHHHHHcCCCEEecCccccc-cc--ccCCcceEeCCC
Confidence 12 365654332 33 46789999999999732 44555578899999999999765321 11 123567887756
Q ss_pred cchHHHHh
Q 003693 721 AEQVPKLR 728 (802)
Q Consensus 721 ~~ev~~~~ 728 (802)
.+++.+..
T Consensus 349 ~~~la~ai 356 (397)
T TIGR03087 349 PADFAAAI 356 (397)
T ss_pred HHHHHHHH
Confidence 67777666
No 82
>PLN02846 digalactosyldiacylglycerol synthase
Probab=96.19 E-value=0.018 Score=66.76 Aligned_cols=130 Identities=15% Similarity=0.105 Sum_probs=93.0
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~ 643 (802)
.+..++|.|++..|+... ++..+..+.+ . . ....+++.|.+ |.-.. +.+.+... +
T Consensus 228 ~~~~l~vGRL~~eK~~~~-Li~a~~~l~~--~-~-------~~~~l~ivGdG-p~~~~-------L~~~a~~l------~ 282 (462)
T PLN02846 228 TKGAYYIGKMVWSKGYKE-LLKLLHKHQK--E-L-------SGLEVDLYGSG-EDSDE-------VKAAAEKL------E 282 (462)
T ss_pred ceEEEEEecCcccCCHHH-HHHHHHHHHh--h-C-------CCeEEEEECCC-ccHHH-------HHHHHHhc------C
Confidence 345789999999999999 8877766543 2 1 14679999998 33222 33344322 1
Q ss_pred CcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccccch
Q 003693 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQ 723 (802)
Q Consensus 644 ~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~~e 723 (802)
+.+.|+.++. ..+.+++++||+.++|+ .|.-|+.-+-||..|.+.|++-.|.+ |+..+ .+|++++.. .++
T Consensus 283 --l~~~vf~G~~--~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~-~~v~~--~~ng~~~~~-~~~ 352 (462)
T PLN02846 283 --LDVRVYPGRD--HADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN-EFFKQ--FPNCRTYDD-GKG 352 (462)
T ss_pred --CcEEEECCCC--CHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc-ceeec--CCceEecCC-HHH
Confidence 2344566663 44579999999999999 99999999999999999999988875 65544 479999953 445
Q ss_pred HHHHh
Q 003693 724 VPKLR 728 (802)
Q Consensus 724 v~~~~ 728 (802)
+....
T Consensus 353 ~a~ai 357 (462)
T PLN02846 353 FVRAT 357 (462)
T ss_pred HHHHH
Confidence 54443
No 83
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=96.08 E-value=0.023 Score=63.26 Aligned_cols=119 Identities=15% Similarity=0.087 Sum_probs=96.9
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
-+.+.++.+.|+---|+.|| ++.+|-+..+ . .| .+.|||+|-+.-.... .++-+++ .
T Consensus 193 ~~i~~ivv~sRLvyrKGiDl-l~~iIp~vc~--~-~p-------~vrfii~GDGPk~i~l--------ee~lEk~----~ 249 (426)
T KOG1111|consen 193 ADIITIVVASRLVYRKGIDL-LLEIIPSVCD--K-HP-------EVRFIIIGDGPKRIDL--------EEMLEKL----F 249 (426)
T ss_pred CCeeEEEEEeeeeeccchHH-HHHHHHHHHh--c-CC-------CeeEEEecCCcccchH--------HHHHHHh----h
Confidence 34599999999999999999 9999999876 2 22 4789999998765543 2222322 2
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccc
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e 707 (802)
+.+ ||+++-.-.=+--+.++.--|+++|+|. +||=|+.=.-||--|-+.++|.-|-..|+-.
T Consensus 250 l~~--rV~~lG~v~h~~Vr~vl~~G~IFlntSl--TEafc~~ivEAaScGL~VVsTrVGGIpeVLP 311 (426)
T KOG1111|consen 250 LQD--RVVMLGTVPHDRVRDVLVRGDIFLNTSL--TEAFCMVIVEAASCGLPVVSTRVGGIPEVLP 311 (426)
T ss_pred ccC--ceEEecccchHHHHHHHhcCcEEeccHH--HHHHHHHHHHHHhCCCEEEEeecCCccccCC
Confidence 355 8999988877777888888899999999 9999999999999999999999998877654
No 84
>PLN02275 transferase, transferring glycosyl groups
Probab=95.98 E-value=0.035 Score=61.87 Aligned_cols=145 Identities=12% Similarity=0.094 Sum_probs=92.2
Q ss_pred ceeeccccchhhhhhhhhhhhHHHHHHHHHhcCccc-------ccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Q 003693 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE-------RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 637 (802)
Q Consensus 565 lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~-------~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in 637 (802)
.+.+.+.|+...|+.+. ++..+..+......-... ......+.|++.|.+.- -. ++-+++.+..
T Consensus 214 ~~i~~~grl~~~k~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~-~~---~l~~~~~~~~---- 284 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGI-LLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQ-KA---MYEEKISRLN---- 284 (371)
T ss_pred EEEEEeCceeccCCHHH-HHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCC-HH---HHHHHHHHcC----
Confidence 45668899999999998 888777664211000000 00112489999998842 22 2222332221
Q ss_pred CCcCCCCcceEEEEcCC-ChhHHhhhcccccccccCCCCC-ccCCCcccchhhccCceEEEeecCccccccccccCccee
Q 003693 638 TDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFF 715 (802)
Q Consensus 638 ~dp~~~~~lkVvFl~nY-~vslA~~iipgaDv~l~iS~a~-~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~f 715 (802)
+. .|+|+..| .-+--..++++||++..++... .|..|+.-+-+|.-|.+.|+|..|..-|+.++ .+||+
T Consensus 285 ----l~---~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~--g~~G~ 355 (371)
T PLN02275 285 ----LR---HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD--GKNGL 355 (371)
T ss_pred ----CC---ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccC--CCCeE
Confidence 22 38887764 4455567899999998643211 26677778889999999999998887766654 36899
Q ss_pred ecccccchHHHHh
Q 003693 716 LFGAVAEQVPKLR 728 (802)
Q Consensus 716 iFg~~~~ev~~~~ 728 (802)
++. ..+++.+..
T Consensus 356 lv~-~~~~la~~i 367 (371)
T PLN02275 356 LFS-SSSELADQL 367 (371)
T ss_pred EEC-CHHHHHHHH
Confidence 997 355555443
No 85
>PLN02501 digalactosyldiacylglycerol synthase
Probab=95.92 E-value=0.023 Score=68.42 Aligned_cols=136 Identities=13% Similarity=0.030 Sum_probs=91.8
Q ss_pred HhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 003693 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE 634 (802)
Q Consensus 555 ~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~ 634 (802)
+.|...+|. -..+|.|++..|+.+. ++..+..+.. . . ....+++.|.+. .-. .+...+.
T Consensus 539 ~lgi~~~~k--giLfVGRLa~EKGld~-LLeAla~L~~--~-~-------pnvrLvIVGDGP-~re-------eLe~la~ 597 (794)
T PLN02501 539 ELGQQAFSK--GAYFLGKMVWAKGYRE-LIDLLAKHKN--E-L-------DGFNLDVFGNGE-DAH-------EVQRAAK 597 (794)
T ss_pred hcCCccccC--ceEEEEcccccCCHHH-HHHHHHHHHh--h-C-------CCeEEEEEcCCc-cHH-------HHHHHHH
Confidence 345543333 2467789999999998 8887766532 2 1 247899999874 211 2222232
Q ss_pred HhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcce
Q 003693 635 VVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENF 714 (802)
Q Consensus 635 ~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~ 714 (802)
.. -+.|.|+.. ...+..+++++||+.++|+ .|.-|+.-+=||..|.+.|+|-.|.+..+. +..|+
T Consensus 598 eL--------gL~V~FLG~--~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~e~V~---~g~nG 662 (794)
T PLN02501 598 RL--------DLNLNFLKG--RDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSNEFFR---SFPNC 662 (794)
T ss_pred Hc--------CCEEEecCC--CCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCCceEe---ecCCe
Confidence 11 125777643 4556678999999999999 999999999999999999999888653322 23688
Q ss_pred eecccccchHHHH
Q 003693 715 FLFGAVAEQVPKL 727 (802)
Q Consensus 715 fiFg~~~~ev~~~ 727 (802)
++++. .+++.+.
T Consensus 663 ll~~D-~EafAeA 674 (794)
T PLN02501 663 LTYKT-SEDFVAK 674 (794)
T ss_pred EecCC-HHHHHHH
Confidence 88854 3444443
No 86
>PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family.
Probab=95.39 E-value=0.0086 Score=57.20 Aligned_cols=43 Identities=19% Similarity=0.249 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHhhhcccCCCceEEEEEehhccccch
Q 003693 55 QAFFATAESVRDRLIQ--QWNETYHHFNKVDPKQTYYLSMEFLQGRTL 100 (802)
Q Consensus 55 ~~y~Ala~~vRD~l~~--~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L 100 (802)
..|.++....++++.. .|..+ ......+.|+||||||+++.+|
T Consensus 74 ~~~~~v~~~f~~Ym~~~~~W~~~---~~~~~~~~IAYFSmEfGlhesL 118 (118)
T PF11897_consen 74 ARYDRVYARFEEYMSQKPTWFQE---PGDTPNPPIAYFSMEFGLHESL 118 (118)
T ss_pred HHHHHHHHHHHHHHcCCCccccC---CCCCCCCCEEEEcccccccccC
Confidence 3444445555555543 35554 2233568999999999999876
No 87
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=95.01 E-value=0.064 Score=50.10 Aligned_cols=128 Identities=17% Similarity=0.141 Sum_probs=74.6
Q ss_pred Ccceeeccccchhhhhhhhhhhh-HHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 563 NSLFDIQVKRIHEYKRQLLNILG-AIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 563 ~~lfd~~vkR~heYKRq~Lnil~-ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
|.++++.+.+++.+|+... ++. ++.++.+ . . .+.+|+|.|...+ + ++.. .
T Consensus 1 ~~~~i~~~g~~~~~k~~~~-li~~~~~~l~~--~-~-------p~~~l~i~G~~~~------~-l~~~---~-------- 51 (135)
T PF13692_consen 1 DILYIGYLGRIRPDKGLEE-LIEAALERLKE--K-H-------PDIELIIIGNGPD------E-LKRL---R-------- 51 (135)
T ss_dssp --EEEE--S-SSGGGTHHH-HHH-HHHHHHH--H-S-------TTEEEEEECESS-------H-HCCH---H--------
T ss_pred Ccccccccccccccccccc-hhhhHHHHHHH--H-C-------cCEEEEEEeCCHH------H-HHHh---c--------
Confidence 4688999999999999998 787 7777654 2 2 2589999999555 1 1111 1
Q ss_pred CCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeeccccc
Q 003693 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVA 721 (802)
Q Consensus 642 ~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~~ 721 (802)
.. +|.|.+.. -.+ ..++++||+.+.++.. -|.+++.-+-+|..|.+.|++-.|+. ++.+. .+.+..+..+.
T Consensus 52 -~~--~v~~~g~~-~e~-~~~l~~~dv~l~p~~~-~~~~~~k~~e~~~~G~pvi~~~~~~~-~~~~~--~~~~~~~~~~~ 122 (135)
T PF13692_consen 52 -RP--NVRFHGFV-EEL-PEILAAADVGLIPSRF-NEGFPNKLLEAMAAGKPVIASDNGAE-GIVEE--DGCGVLVANDP 122 (135)
T ss_dssp -HC--TEEEE-S--HHH-HHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHHHCH-CHS-----SEEEE-TT-H
T ss_pred -CC--CEEEcCCH-HHH-HHHHHhCCEEEEEeeC-CCcCcHHHHHHHHhCCCEEECCcchh-hheee--cCCeEEECCCH
Confidence 12 58888887 344 5558889999988752 33566777889999999999877422 22332 24445555566
Q ss_pred chHHHHh
Q 003693 722 EQVPKLR 728 (802)
Q Consensus 722 ~ev~~~~ 728 (802)
+++.+..
T Consensus 123 ~~l~~~i 129 (135)
T PF13692_consen 123 EELAEAI 129 (135)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 88
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.19 E-value=0.35 Score=49.31 Aligned_cols=136 Identities=17% Similarity=0.156 Sum_probs=91.1
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~~ 643 (802)
..+.+++.|+.+.|+..+ ++..+..+.... ....+++.|.+... +. .+..+...... .
T Consensus 199 ~~~i~~~g~~~~~k~~~~-~i~~~~~~~~~~----------~~~~~~~~g~~~~~----~~---~~~~~~~~~~~----~ 256 (381)
T COG0438 199 KFVVLYVGRLDPEKGLDL-LIEAAAKLKKRG----------PDIKLVIVGDGPER----RE---ELEKLAKKLGL----E 256 (381)
T ss_pred ceEEEEeeccChhcCHHH-HHHHHHHhhhhc----------CCeEEEEEcCCCcc----HH---HHHHHHHHhCC----C
Confidence 478999999999999999 777766654410 12788999988876 11 22223332211 2
Q ss_pred CcceEEEEcCCC-hhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecccc-c
Q 003693 644 SYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV-A 721 (802)
Q Consensus 644 ~~lkVvFl~nY~-vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~~-~ 721 (802)
+ .|.|+-.-. ..+.. ++..||+..++|. .|+-|..-+-+|..|.+.|++.-|...|+....+ +++++... .
T Consensus 257 ~--~v~~~g~~~~~~~~~-~~~~~~~~v~ps~--~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~--~g~~~~~~~~ 329 (381)
T COG0438 257 D--NVKFLGYVPDEELAE-LLASADVFVLPSL--SEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGE--TGLLVPPGDV 329 (381)
T ss_pred C--cEEEecccCHHHHHH-HHHhCCEEEeccc--cccchHHHHHHHhcCCcEEECCCCChHHHhcCCC--ceEecCCCCH
Confidence 3 566643333 34555 8888899999999 5999999899999998888888876665554422 56755554 3
Q ss_pred chHHHHh
Q 003693 722 EQVPKLR 728 (802)
Q Consensus 722 ~ev~~~~ 728 (802)
+++....
T Consensus 330 ~~~~~~i 336 (381)
T COG0438 330 EELADAL 336 (381)
T ss_pred HHHHHHH
Confidence 5555544
No 89
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=93.28 E-value=0.35 Score=55.33 Aligned_cols=273 Identities=17% Similarity=0.194 Sum_probs=155.9
Q ss_pred ceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccHHHHHhhchhHHHHHHHHHHHHH
Q 003693 333 KVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFI 412 (802)
Q Consensus 333 ~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~~l~~~~Lpr~~~ii~~in~~~~ 412 (802)
.++-|.|||.++++ +-+.|... ....++||+|.- +|.|||= -=|-.|-
T Consensus 175 ~vVahFHEW~AGVg-L~l~R~rr-------------l~iaTifTTHAT---------------LLGRyLC---A~~~DfY 222 (692)
T KOG3742|consen 175 AVVAHFHEWQAGVG-LILCRARR-------------LDIATIFTTHAT---------------LLGRYLC---AGNVDFY 222 (692)
T ss_pred HHHHHHHHHHhccc-hheehhcc-------------cceEEEeehhHH---------------HHHHHHh---cccchhh
Confidence 46789999999999 44444321 456789999942 3344331 0011111
Q ss_pred HHHHHhCCCCcchhcccccccCCCCCCccccccchhhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccc-cccCcc
Q 003693 413 AMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKT-NGITPR 491 (802)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~ii~~~~~~~~v~Ma~lai~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iT-NGI~~r 491 (802)
..+ +.|..|.+.= +-.| +++..|-..|..++|..++||++-+-+..+. +..|=..|| ||...-
T Consensus 223 NnL-d~f~vD~EAG-kr~I------YHrYC~ERaa~h~AhVFTTVSeITa~EAeHl--------LkRKPD~itPNGLNV~ 286 (692)
T KOG3742|consen 223 NNL-DSFDVDKEAG-KRQI------YHRYCLERAAAHTAHVFTTVSEITALEAEHL--------LKRKPDVITPNGLNVK 286 (692)
T ss_pred hch-hhcccchhhc-cchh------HHHHHHHHHhhhhhhhhhhHHHHHHHHHHHH--------HhcCCCeeCCCCccee
Confidence 111 1122221110 0001 2266899999999999999999877665522 222222332 776654
Q ss_pred ccccccChhHHHHHHHhcCccccccCchhHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCCC-Ccceee
Q 003693 492 RWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG--VTIDP-NSLFDI 568 (802)
Q Consensus 492 rWl~~~NP~l~~li~~~~g~~~w~~~~~~l~~l~~~~~d~~~~~~~~~~K~~nK~~L~~~i~~~~g--~~vdp-~~lfd~ 568 (802)
.+-+ + -+++..+..+|.+..+||+-++- +++|- ..++--
T Consensus 287 KFsA-----~---------------------------------HEFQNLHA~~KekIndFVRGHF~GhlDFdLdkTlyfF 328 (692)
T KOG3742|consen 287 KFSA-----V---------------------------------HEFQNLHAQKKEKINDFVRGHFHGHLDFDLDKTLYFF 328 (692)
T ss_pred ehhH-----H---------------------------------HHHHHHHHHHHHHHHHHhhhhccccccccccceEEEE
Confidence 4410 0 12567889999999999998873 33333 345555
Q ss_pred ccccc-hhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCe-EEEEEecCCCCCH---HHHHHHHHHHHHHHHhc------
Q 003693 569 QVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPR-TIMIGGKAFATYT---NAKRIVKLVNDVGEVVN------ 637 (802)
Q Consensus 569 ~vkR~-heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~-~fIf~GKA~P~y~---~aK~iIk~I~~va~~in------ 637 (802)
.+.|- -.-|++++ .+..+.|++.++.++.. +.+-+ .+|+-.|+..--- .|+.++|.+.+.++.+.
T Consensus 329 iAGRYEf~NKGaDm-FiEsLaRLN~~Lk~~~s---~~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv~~Vk~~~Gkr 404 (692)
T KOG3742|consen 329 IAGRYEFSNKGADM-FIESLARLNYLLKVSGS---PKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTVNEVKEKVGKR 404 (692)
T ss_pred EeeeeeeccCchHH-HHHHHHHhHHHHeecCC---CceEEEEEEeecCCCccchhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 66675 34689999 99999999865543211 11112 2344455543322 24445555444333221
Q ss_pred -------------------------------------------------CCcCC------------CCcceEEEEcCCCh
Q 003693 638 -------------------------------------------------TDPEV------------NSYLKVVFVPNYNV 656 (802)
Q Consensus 638 -------------------------------------------------~dp~~------------~~~lkVvFl~nY~v 656 (802)
+||.+ .++.||+|-|.|=-
T Consensus 405 ifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRVKvifHPEFLs 484 (692)
T KOG3742|consen 405 IFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRVKVIFHPEFLS 484 (692)
T ss_pred HHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCcccceEEEecHHHhc
Confidence 11111 24567777776644
Q ss_pred hHH-------hhhcccccccccCCCCCccCCCcccchhhccCceEEEe
Q 003693 657 SVA-------ELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 697 (802)
Q Consensus 657 slA-------~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~t 697 (802)
+.. +-.+.||-+-..||. +||=|-----.-.-|.+.|+|
T Consensus 485 s~sPllglDYeeFVRGCHLGVFPSY--YEPWGYTPAECTVMGiPSvtT 530 (692)
T KOG3742|consen 485 STSPLLGLDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSVTT 530 (692)
T ss_pred cCCCCcCCCHHHHhccccccccccc--cCCCCCCchheEEeccccccc
Confidence 443 334677888888887 888777666666667777666
No 90
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=92.71 E-value=3 Score=52.66 Aligned_cols=147 Identities=14% Similarity=0.191 Sum_probs=92.8
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecC----CCCCHHHHHHHHHHHHHHHHhcCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA----FATYTNAKRIVKLVNDVGEVVNTD 639 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA----~P~y~~aK~iIk~I~~va~~in~d 639 (802)
.-+++-|-|+..-|+... .|...+++++ + +|..+ ..+++|=-+-. -|.| +++-+.|.++...||..
T Consensus 363 ~kiIlgVDRLD~~KGI~~-kL~AfE~fL~--~-~Pe~r---~kVVLvQIa~psr~~v~eY---~~l~~~V~~~V~rIN~~ 432 (934)
T PLN03064 363 RKVMLGVDRLDMIKGIPQ-KILAFEKFLE--E-NPEWR---DKVVLLQIAVPTRTDVPEY---QKLTSQVHEIVGRINGR 432 (934)
T ss_pred ceEEEEeeccccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEcCCCCCCcHHH---HHHHHHHHHHHHHHhhh
Confidence 458889999999999998 8888888855 4 56643 12344322211 1333 34556677777788643
Q ss_pred cCCCCcceEEEEcCCChhHHh--hhcccccccccCCCCCccCCCcccchhhc-----cCceEEEeecCccccccccccCc
Q 003693 640 PEVNSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTAGMEASGTSNMKFSL-----NGCLIIGTLDGANVEIRQEIGEE 712 (802)
Q Consensus 640 p~~~~~lkVvFl~nY~vslA~--~iipgaDv~l~iS~a~~EASGTs~MKa~l-----NGal~i~tlDGanvEi~e~~g~~ 712 (802)
=-..+..=|.++.. .++..+ -++.+||+.+-+|. .|--++--+-+|. .|+|.+|-..|+--+. | .
T Consensus 433 fg~~~w~Pv~~~~~-~l~~eeL~AlY~~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L----~-~ 504 (934)
T PLN03064 433 FGTLTAVPIHHLDR-SLDFHALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL----G-A 504 (934)
T ss_pred ccCCCcceEEEecc-CCCHHHHHHHHHhCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh----C-C
Confidence 32233334666654 344454 57899999999999 6655555555544 4999999999977443 2 2
Q ss_pred ceeeccccc-chHHHHh
Q 003693 713 NFFLFGAVA-EQVPKLR 728 (802)
Q Consensus 713 n~fiFg~~~-~ev~~~~ 728 (802)
..+++.... +++.+.+
T Consensus 505 ~AllVNP~D~~~vA~AI 521 (934)
T PLN03064 505 GAILVNPWNITEVAASI 521 (934)
T ss_pred ceEEECCCCHHHHHHHH
Confidence 345555543 5555554
No 91
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=87.79 E-value=19 Score=42.36 Aligned_cols=149 Identities=11% Similarity=0.040 Sum_probs=93.5
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCC-HHHHHHHHHHHHHHHHhcCCcCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDPEV 642 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y-~~aK~iIk~I~~va~~in~dp~~ 642 (802)
.-+++=|-|+.--|+... =|...+++++ . +|+.+. .+++|=-+-..-.. ..=+++-+.|.++...||..=-.
T Consensus 255 ~~lilgVDRLDytKGi~~-rl~Afe~fL~--~-~Pe~~g---kvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~ 327 (474)
T PRK10117 255 VQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHHG---KIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQ 327 (474)
T ss_pred CeEEEEecccccccCHHH-HHHHHHHHHH--h-ChhhcC---CEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCC
Confidence 346667899999999988 7788888865 4 677542 34444332221111 22245667888888888865555
Q ss_pred CCcceEEEEcCCChhHHh--hhcccccccccCCCC------CccCCCcccchhhccCceEEEeecCccccccccccCcce
Q 003693 643 NSYLKVVFVPNYNVSVAE--LLIPGSELSQHISTA------GMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENF 714 (802)
Q Consensus 643 ~~~lkVvFl~nY~vslA~--~iipgaDv~l~iS~a------~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~ 714 (802)
.+..=|.++.. .++..+ -++.+|||-+=+|++ .+|-.-... ---.|+|.+|...||--+..+.
T Consensus 328 ~~w~Pv~y~~~-~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~--~~~~GvLILSefAGaA~~L~~A------ 398 (474)
T PRK10117 328 LGWTPLYYLNQ-HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQD--PANPGVLVLSQFAGAANELTSA------ 398 (474)
T ss_pred CCceeEEEecC-CCCHHHHHHHHHhccEEEecccccccccccchheeeec--CCCCccEEEecccchHHHhCCC------
Confidence 55555777665 555555 679999999999984 122211110 1235999999999988655322
Q ss_pred eeccccc-chHHHHh
Q 003693 715 FLFGAVA-EQVPKLR 728 (802)
Q Consensus 715 fiFg~~~-~ev~~~~ 728 (802)
.+.+... +++.+.+
T Consensus 399 llVNP~d~~~~A~Ai 413 (474)
T PRK10117 399 LIVNPYDRDEVAAAL 413 (474)
T ss_pred eEECCCCHHHHHHHH
Confidence 2444444 5666655
No 92
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=87.47 E-value=2.2 Score=47.53 Aligned_cols=162 Identities=12% Similarity=0.013 Sum_probs=89.8
Q ss_pred CcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 003693 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (802)
Q Consensus 563 ~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~~ 642 (802)
+.+.++++.++.+. .++.++. ...+ . .| ...|+|.|.+.+..... .+. .
T Consensus 204 ~~~~i~y~G~l~~~--~d~~ll~---~la~--~-~p-------~~~~vliG~~~~~~~~~--------~~~-------~- 252 (373)
T cd04950 204 PRPVIGYYGAIAEW--LDLELLE---ALAK--A-RP-------DWSFVLIGPVDVSIDPS--------ALL-------R- 252 (373)
T ss_pred CCCEEEEEeccccc--cCHHHHH---HHHH--H-CC-------CCEEEEECCCcCccChh--------Hhc-------c-
Confidence 46788999999883 3332222 2222 2 22 46899999873332221 010 1
Q ss_pred CCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccch---hhccCceEEEeecCccccccccccCcceeeccc
Q 003693 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK---FSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (802)
Q Consensus 643 ~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MK---a~lNGal~i~tlDGanvEi~e~~g~~n~fiFg~ 719 (802)
.+ +|.|+.--.-+-....+.++|+.+.++...--..+++.+| +|.-|.+.|+|--+..++ .. +.+++-..
T Consensus 253 ~~--nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~--~~~~~~~~ 325 (373)
T cd04950 253 LP--NVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YE--DEVVLIAD 325 (373)
T ss_pred CC--CEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hc--CcEEEeCC
Confidence 12 5888876555566678899999999987542223455565 788999999885444332 22 23444455
Q ss_pred ccchHHHHhhhccCCCCCCChHHHHHHHHHHcCCCCCCC-hHHHHHHH
Q 003693 720 VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD-YNPLLDSL 766 (802)
Q Consensus 720 ~~~ev~~~~~~~~~~~~~~~~~l~~v~~~m~~g~fs~~~-f~~ly~~l 766 (802)
+.+++.+.... ....-. ....++... +... +||+. ...+...|
T Consensus 326 d~~~~~~ai~~-~l~~~~-~~~~~~~~~-~~~~-~sW~~~a~~~~~~l 369 (373)
T cd04950 326 DPEEFVAAIEK-ALLEDG-PARERRRLR-LAAQ-NSWDARAAEMLEAL 369 (373)
T ss_pred CHHHHHHHHHH-HHhcCC-chHHHHHHH-HHHH-CCHHHHHHHHHHHH
Confidence 56788777733 221111 111222222 4555 88875 44444333
No 93
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=81.39 E-value=67 Score=40.70 Aligned_cols=136 Identities=13% Similarity=0.109 Sum_probs=85.8
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCC-CCHHHHHHHHHHHHHHHHhcCCc
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA-TYTNAKRIVKLVNDVGEVVNTDP 640 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P-~y~~aK~iIk~I~~va~~in~dp 640 (802)
++..+++=|-|+.--|+..+ =|...+++++ + +|..+ ..+++|=-.-..- .-..=+++-+.|.++...||..=
T Consensus 337 ~~~~~ilgVDrlD~~KGi~~-kl~A~e~~L~--~-~P~~~---gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~f 409 (854)
T PLN02205 337 QDRIMLLGVDDMDIFKGISL-KLLAMEQLLM--Q-HPEWQ---GKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETF 409 (854)
T ss_pred CCCEEEEEccCcccccCHHH-HHHHHHHHHH--h-Ccccc---CCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhc
Confidence 45678888999999999999 7777888865 5 67754 2344443322221 11222345667778888887554
Q ss_pred CCCCcceEEEEcCCChhHHhh--hcccccccccCCCCC------ccC--CCccc--ch-------h-hccCceEEEeecC
Q 003693 641 EVNSYLKVVFVPNYNVSVAEL--LIPGSELSQHISTAG------MEA--SGTSN--MK-------F-SLNGCLIIGTLDG 700 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~--iipgaDv~l~iS~a~------~EA--SGTs~--MK-------a-~lNGal~i~tlDG 700 (802)
-..+..-|+++.. .++..++ ++.+||+.+=+|++- +|- |-.++ |. . -..|+|.+|-..|
T Consensus 410 g~~~~~Pv~~~~~-~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaG 488 (854)
T PLN02205 410 GKPGYDPIVLIDA-PLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIG 488 (854)
T ss_pred CCCCCceEEEEec-CCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccc
Confidence 4445555777754 4555554 699999999998852 232 32211 11 0 1479999999999
Q ss_pred ccccc
Q 003693 701 ANVEI 705 (802)
Q Consensus 701 anvEi 705 (802)
+--+.
T Consensus 489 aa~~L 493 (854)
T PLN02205 489 CSPSL 493 (854)
T ss_pred hhHHh
Confidence 76444
No 94
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=77.12 E-value=27 Score=41.16 Aligned_cols=147 Identities=16% Similarity=0.213 Sum_probs=80.2
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEec-CCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK-AFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GK-A~P~y~~aK~iIk~I~~va~~in~dp~~ 642 (802)
.-+++=|-|+..-|+..+ =|..++++++ + +|..+ ..+++|=-+- +-..-..-.++-..+.+++..||..=-.
T Consensus 276 ~~ii~gvDrld~~kGi~~-kl~Afe~fL~--~-~P~~~---~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~ 348 (474)
T PF00982_consen 276 RKIIVGVDRLDYTKGIPE-KLRAFERFLE--R-YPEYR---GKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGT 348 (474)
T ss_dssp SEEEEEE--B-GGG-HHH-HHHHHHHHHH--H--GGGT---TTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-B
T ss_pred cEEEEEeccchhhcCHHH-HHHHHHHHHH--h-CcCcc---CcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhccc
Confidence 467888999999999999 8888999866 5 78764 2355553332 3333333456777788888888754333
Q ss_pred CCcceEEEEcCCChhHHhh--hcccccccccCCCCCccCCCcccchh--------hccCceEEEeecCccccccccccCc
Q 003693 643 NSYLKVVFVPNYNVSVAEL--LIPGSELSQHISTAGMEASGTSNMKF--------SLNGCLIIGTLDGANVEIRQEIGEE 712 (802)
Q Consensus 643 ~~~lkVvFl~nY~vslA~~--iipgaDv~l~iS~a~~EASGTs~MKa--------~lNGal~i~tlDGanvEi~e~~g~~ 712 (802)
.+.--|.++.. +++.+++ ++..||+.+-+|.+ .|.+ +-+ --.|+|.+|...|+--+..+.
T Consensus 349 ~~~~PI~~~~~-~~~~~~~~aly~~aDv~lvTslr----DGmN-Lva~Eyva~q~~~~GvLiLSefaGaa~~L~~~---- 418 (474)
T PF00982_consen 349 PDWTPIIYIYR-SLSFEELLALYRAADVALVTSLR----DGMN-LVAKEYVACQDDNPGVLILSEFAGAAEQLSEA---- 418 (474)
T ss_dssp TTB-SEEEE-S----HHHHHHHHHH-SEEEE--SS----BS---HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS----
T ss_pred CCceeEEEEec-CCCHHHHHHHHHhhhhEEecchh----hccC-CcceEEEEEecCCCCceEeeccCCHHHHcCCc----
Confidence 33344788886 5555554 68999999999993 2222 111 157999999999987544322
Q ss_pred ceeeccccc-chHHHHh
Q 003693 713 NFFLFGAVA-EQVPKLR 728 (802)
Q Consensus 713 n~fiFg~~~-~ev~~~~ 728 (802)
. -+..... +++.+.+
T Consensus 419 a-l~VNP~d~~~~A~ai 434 (474)
T PF00982_consen 419 A-LLVNPWDIEEVADAI 434 (474)
T ss_dssp --EEE-TT-HHHHHHHH
T ss_pred c-EEECCCChHHHHHHH
Confidence 1 2333333 5666555
No 95
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=75.31 E-value=8.6 Score=43.54 Aligned_cols=146 Identities=17% Similarity=0.087 Sum_probs=80.0
Q ss_pred CcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHH--HhcCCc
Q 003693 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGE--VVNTDP 640 (802)
Q Consensus 563 ~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~--~in~dp 640 (802)
+.++++++++. -|...+ ++..+.++.+ . .| ...+|++|. +|. ..+++.+++.+..- +.-...
T Consensus 232 ~~~vil~~~~~--~~~~~~-ll~A~~~l~~--~-~~-------~~~liivG~-g~~--r~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 232 NRPVWIAASTH--EGEEEL-VLDAHRALLK--Q-FP-------NLLLILVPR-HPE--RFKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred CCcEEEEeCCC--chHHHH-HHHHHHHHHH--h-CC-------CcEEEEcCC-Chh--hHHHHHHHHHhCCCcEEEccCC
Confidence 45666777763 366655 6666655433 2 12 367888886 342 23455555544321 000000
Q ss_pred CCCCcceEEEEcCCChhHHhhhccccccccc-CCCCCccCCCcccchhhccCceEEEeec-CccccccccccCcceeecc
Q 003693 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQH-ISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFG 718 (802)
Q Consensus 641 ~~~~~lkVvFl~nY~vslA~~iipgaDv~l~-iS~a~~EASGTs~MKa~lNGal~i~tlD-GanvEi~e~~g~~n~fiFg 718 (802)
..+..-..|++-+..-.+ ..++++||+... .|. .|..|.+-+=+|.-|.+.|++-. |..-|+.+.+ .++++++.
T Consensus 296 ~~~~~~~~v~l~~~~~el-~~~y~~aDi~~v~~S~--~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~ 371 (425)
T PRK05749 296 EPPSADTDVLLGDTMGEL-GLLYAIADIAFVGGSL--VKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQ 371 (425)
T ss_pred CCCCCCCcEEEEecHHHH-HHHHHhCCEEEECCCc--CCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEE
Confidence 000000134444433334 478899999554 566 57889999999999999998654 3333444433 23566665
Q ss_pred c-ccchHHHHh
Q 003693 719 A-VAEQVPKLR 728 (802)
Q Consensus 719 ~-~~~ev~~~~ 728 (802)
. ..+++.+..
T Consensus 372 ~~d~~~La~~l 382 (425)
T PRK05749 372 VEDAEDLAKAV 382 (425)
T ss_pred ECCHHHHHHHH
Confidence 3 235565554
No 96
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=64.55 E-value=30 Score=38.23 Aligned_cols=72 Identities=18% Similarity=0.061 Sum_probs=49.1
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeec-CccccccccccCcceeecccccchHH
Q 003693 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFGAVAEQVP 725 (802)
Q Consensus 647 kVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlD-GanvEi~e~~g~~n~fiFg~~~~ev~ 725 (802)
+|.|+......---.++..||+..-+ ||+..+=+|.-|.+.|.+.+ |...|..+ .+++.+.+...+++.
T Consensus 256 ~v~~~~~~~~~~~~~~l~~ad~vv~~-------Sg~~~~EA~a~g~PvI~~~~~~~~~e~~~---~g~~~lv~~d~~~i~ 325 (365)
T TIGR00236 256 RVHLIEPLEYLDFLNLAANSHLILTD-------SGGVQEEAPSLGKPVLVLRDTTERPETVE---AGTNKLVGTDKENIT 325 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEC-------ChhHHHHHHHcCCCEEECCCCCCChHHHh---cCceEEeCCCHHHHH
Confidence 58888755544444678999998643 47778889999999999765 54445443 245556666667776
Q ss_pred HHh
Q 003693 726 KLR 728 (802)
Q Consensus 726 ~~~ 728 (802)
+..
T Consensus 326 ~ai 328 (365)
T TIGR00236 326 KAA 328 (365)
T ss_pred HHH
Confidence 655
No 97
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=64.48 E-value=30 Score=38.19 Aligned_cols=108 Identities=16% Similarity=0.171 Sum_probs=61.9
Q ss_pred HhCCCCCCCcce--eeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHH
Q 003693 555 VTGVTIDPNSLF--DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDV 632 (802)
Q Consensus 555 ~~g~~vdp~~lf--d~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~v 632 (802)
++|++ ++.++ ..--.|..+.|+..--++..+..+.+ . .| ..++|+.|- +|.+.. ++.+++...
T Consensus 179 ~l~~~--~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~--~-~~-------~~~~ii~~~-~~~~~~--~~~~~~~~~ 243 (380)
T PRK00025 179 RLGLD--PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQ--R-YP-------DLRFVLPLV-NPKRRE--QIEEALAEY 243 (380)
T ss_pred HcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH--h-CC-------CeEEEEecC-ChhhHH--HHHHHHhhc
Confidence 55654 44433 33346888877754325555555432 2 11 357888763 343332 222222111
Q ss_pred HHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeec
Q 003693 633 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 699 (802)
Q Consensus 633 a~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlD 699 (802)
+ .+.|.++.+ . ...++++||+..-. |||+.+=+|..|.+.|.+..
T Consensus 244 ~-----------~~~v~~~~~---~-~~~~~~~aDl~v~~-------sG~~~lEa~a~G~PvI~~~~ 288 (380)
T PRK00025 244 A-----------GLEVTLLDG---Q-KREAMAAADAALAA-------SGTVTLELALLKVPMVVGYK 288 (380)
T ss_pred C-----------CCCeEEEcc---c-HHHHHHhCCEEEEC-------ccHHHHHHHHhCCCEEEEEc
Confidence 0 123444443 2 35678999999874 59999999999999998743
No 98
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=64.43 E-value=41 Score=39.89 Aligned_cols=147 Identities=16% Similarity=0.099 Sum_probs=102.7
Q ss_pred CCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEec--CCCCCHHHHHHHHHHHHHHHHhcC
Q 003693 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK--AFATYTNAKRIVKLVNDVGEVVNT 638 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GK--A~P~y~~aK~iIk~I~~va~~in~ 638 (802)
.-.-.|+.-+-|+..-|+++| +|....++..... +|+ +.-...+|+|+ -.+..-.-.+.++-+.++.+.++.
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l-~l~a~~~~~~~i~-~~~----~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDL-ALPAFTLLHDSIP-EPS----ISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred cccceEeeeeeecCCCCCcee-ehhhHHhhhcccC-CCC----CCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 344678888899999999999 9998777764322 222 22456677773 345555556677777777776632
Q ss_pred CcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccCcceeecc
Q 003693 639 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (802)
Q Consensus 639 dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~~n~fiFg 718 (802)
..+ .|.|++--+=+ +...-++|.--..+++..|+=|.=-.-||-.|-++|+|--|--.||.... .|||+-.
T Consensus 344 ---~g~--~v~~~~s~~~~--~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~--~tG~l~d 414 (495)
T KOG0853|consen 344 ---LGQ--FVWFLPSTTRV--AKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHG--VTGLLID 414 (495)
T ss_pred ---cCc--eEEEecCCchH--HHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcC--CcceeeC
Confidence 133 45665664433 33455556555556666899999999999999999999999888887763 7999998
Q ss_pred cccc
Q 003693 719 AVAE 722 (802)
Q Consensus 719 ~~~~ 722 (802)
...+
T Consensus 415 p~~e 418 (495)
T KOG0853|consen 415 PGQE 418 (495)
T ss_pred CchH
Confidence 8554
No 99
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=55.52 E-value=5.8 Score=36.90 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=20.6
Q ss_pred CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCc
Q 003693 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVL 381 (802)
Q Consensus 331 ~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~ 381 (802)
.++++||+|.++++++ ..++|.. .+..+++|.|+..
T Consensus 72 ~~~Dvv~~~~~~~~~~-~~~~~~~--------------~~~p~v~~~h~~~ 107 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLV-AALARRR--------------RGIPLVVTVHGTL 107 (160)
T ss_dssp ---SEEEEEHHHHHHH-HHHHHHH--------------HT--EEEE-SS-T
T ss_pred cCCeEEEecccchhHH-HHHHHHc--------------cCCcEEEEECCCc
Confidence 4678999999775554 4555522 4678899999754
No 100
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=52.23 E-value=83 Score=34.30 Aligned_cols=137 Identities=16% Similarity=0.168 Sum_probs=69.3
Q ss_pred HhCCCCCCCcceeeccccchh---hhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHH
Q 003693 555 VTGVTIDPNSLFDIQVKRIHE---YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 631 (802)
Q Consensus 555 ~~g~~vdp~~lfd~~vkR~he---YKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~ 631 (802)
..|+ .++..+.++..|... .|+... ++..+.++ .. . ..++|+.| +|.... ++.+.+.+
T Consensus 192 ~~~~--~~~~~vlv~~~r~~~~~~~k~~~~-l~~al~~l---~~-------~--~~~vi~~~--~~~~~~--~l~~~~~~ 252 (363)
T cd03786 192 LLGL--LPKKYILVTLHRVENVDDGEQLEE-ILEALAEL---AE-------E--DVPVVFPN--HPRTRP--RIREAGLE 252 (363)
T ss_pred hccc--CCCCEEEEEeCCccccCChHHHHH-HHHHHHHH---Hh-------c--CCEEEEEC--CCChHH--HHHHHHHh
Confidence 4454 345566777777664 677666 66665543 22 0 24666654 333322 22223222
Q ss_pred HHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccccccccccC
Q 003693 632 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGE 711 (802)
Q Consensus 632 va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanvEi~e~~g~ 711 (802)
+. . -.+ +|.|+.--...--..++.+||+..-+|- |+ ..-+|..|.+.|.+-+.. |..+.+..
T Consensus 253 ~~----~---~~~--~v~~~~~~~~~~~~~l~~~ad~~v~~Sg------gi-~~Ea~~~g~PvI~~~~~~--~~~~~~~~ 314 (363)
T cd03786 253 FL----G---HHP--NVLLISPLGYLYFLLLLKNADLVLTDSG------GI-QEEASFLGVPVLNLRDRT--ERPETVES 314 (363)
T ss_pred hc----c---CCC--CEEEECCcCHHHHHHHHHcCcEEEEcCc------cH-HhhhhhcCCCEEeeCCCC--ccchhhhe
Confidence 21 1 023 4666532112234456899999997762 33 566777788888875432 22233322
Q ss_pred cceeecccccchHHHHh
Q 003693 712 ENFFLFGAVAEQVPKLR 728 (802)
Q Consensus 712 ~n~fiFg~~~~ev~~~~ 728 (802)
+.+...+...+++.+..
T Consensus 315 g~~~~~~~~~~~i~~~i 331 (363)
T cd03786 315 GTNVLVGTDPEAILAAI 331 (363)
T ss_pred eeEEecCCCHHHHHHHH
Confidence 33344443345555444
No 101
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=51.92 E-value=55 Score=35.40 Aligned_cols=60 Identities=10% Similarity=0.061 Sum_probs=38.8
Q ss_pred hhhcccccccccCCCCCccCCCc-ccchhhccCceEEEeecCc-------cccccccccCcceeeccc---ccchHHHHh
Q 003693 660 ELLIPGSELSQHISTAGMEASGT-SNMKFSLNGCLIIGTLDGA-------NVEIRQEIGEENFFLFGA---VAEQVPKLR 728 (802)
Q Consensus 660 ~~iipgaDv~l~iS~a~~EASGT-s~MKa~lNGal~i~tlDGa-------nvEi~e~~g~~n~fiFg~---~~~ev~~~~ 728 (802)
..++++||+.... ||+ .-+=+|..|.+.|+|..+. +.|+..+ .++|+++.. +.+++.+..
T Consensus 245 ~~~l~~ad~~v~~-------~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~--~~~G~~~~~~~~~~~~l~~~i 315 (348)
T TIGR01133 245 AAAYAAADLVISR-------AGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED--LGAGLVIRQKELLPEKLLEAL 315 (348)
T ss_pred HHHHHhCCEEEEC-------CChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH--CCCEEEEecccCCHHHHHHHH
Confidence 5789999998852 454 4558999999999986532 2233332 356777643 245565554
No 102
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=50.28 E-value=19 Score=42.50 Aligned_cols=133 Identities=17% Similarity=0.164 Sum_probs=83.5
Q ss_pred cceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEE-EEecCCCCCHHHHHHHHHHHHHHHHhcCCcCC
Q 003693 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIM-IGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (802)
Q Consensus 564 ~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fI-f~GKA~P~y~~aK~iIk~I~~va~~in~dp~~ 642 (802)
.-+++=+-|+..-|+-.- =|...+++++ + +|..+.+ +++| ++-...+.-..=+.+-+.|..+...||.-=-.
T Consensus 282 ~kiivgvDRlDy~kGi~~-rl~Afe~lL~--~-~Pe~~~k---vvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~ 354 (486)
T COG0380 282 KKLIVGVDRLDYSKGIPQ-RLLAFERLLE--E-YPEWRGK---VVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGS 354 (486)
T ss_pred ceEEEEehhcccccCcHH-HHHHHHHHHH--h-ChhhhCc---eEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCC
Confidence 445566778888888765 6667777754 5 6776533 3443 33333333333367888888888889754444
Q ss_pred CCcceEEEEcC-CChhHHhhhcccccccccCCCCCccCCCcccch-------hhccCceEEEeecCccccccc
Q 003693 643 NSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMK-------FSLNGCLIIGTLDGANVEIRQ 707 (802)
Q Consensus 643 ~~~lkVvFl~n-Y~vslA~~iipgaDv~l~iS~a~~EASGTs~MK-------a~lNGal~i~tlDGanvEi~e 707 (802)
-+..=|.|+.- .+-..--.++..||+.+=+|.+. |.+-+. ...+|+|.+|-..|+--|..+
T Consensus 355 ~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrD----GMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~ 423 (486)
T COG0380 355 LSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRD----GMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD 423 (486)
T ss_pred CCcceeEEEeccCCHHHHHHHHhhhceeeeccccc----cccHHHHHHHHhhcCCCCcEEEeccccchhhhcc
Confidence 44444666543 33333444789999999999852 322211 123799999999998765554
No 103
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=48.41 E-value=78 Score=35.91 Aligned_cols=112 Identities=13% Similarity=0.090 Sum_probs=64.8
Q ss_pred HhCCCCCCCcceee--ccccchhh-hhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHH
Q 003693 555 VTGVTIDPNSLFDI--QVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 631 (802)
Q Consensus 555 ~~g~~vdp~~lfd~--~vkR~heY-KRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~ 631 (802)
++|+ +++.+++. -.+|.++- |.... ++..+.++.+ . .| ..++++.+-..++... +.+
T Consensus 184 ~lgl--~~~~~~Ilvl~GSR~aei~k~~~~-ll~a~~~l~~--~-~p-------~~~~vi~~~~~~~~~~-------~~~ 243 (385)
T TIGR00215 184 KLGI--DHNGETLALLPGSRGSEVEKLFPL-FLKAAQLLEQ--Q-EP-------DLRRVLPVVNFKRRLQ-------FEQ 243 (385)
T ss_pred HcCC--CCCCCEEEEECCCCHHHHHHhHHH-HHHHHHHHHH--h-CC-------CeEEEEEeCCchhHHH-------HHH
Confidence 5565 45555554 34799984 33334 5555555533 2 11 2466665433322221 222
Q ss_pred HHHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCccc
Q 003693 632 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANV 703 (802)
Q Consensus 632 va~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGanv 703 (802)
+.+.+.. .. +|.++.+ ++ ..++++||+..-.| ||+-+=+|..|.+.|.+.--..+
T Consensus 244 ~~~~~~~----~~--~v~~~~~-~~---~~~l~aADl~V~~S-------Gt~tlEa~a~G~P~Vv~yk~~pl 298 (385)
T TIGR00215 244 IKAEYGP----DL--QLHLIDG-DA---RKAMFAADAALLAS-------GTAALEAALIKTPMVVGYRMKPL 298 (385)
T ss_pred HHHHhCC----CC--cEEEECc-hH---HHHHHhCCEEeecC-------CHHHHHHHHcCCCEEEEEcCCHH
Confidence 2222211 22 5666654 33 35889999988665 99999999999999998665433
No 104
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=36.96 E-value=1.8e+02 Score=34.80 Aligned_cols=163 Identities=10% Similarity=0.036 Sum_probs=99.1
Q ss_pred CCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCCcC
Q 003693 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (802)
Q Consensus 562 p~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~dp~ 641 (802)
+.+++=+.|-|+ +-|+.+- ++..+.++.. . +| ..++.|-|.+.+. ...+.+-++|.++....+.+..
T Consensus 319 ~~~~I~v~idrL-~ek~~~~-~I~av~~~~~--~-~p-------~~~L~~~gy~~~~-~~~~~l~~~i~~~~~~~~~~~~ 385 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQ-ILQQLLQYIL--K-NP-------DYELKILTYNNDN-DITQLLEDILEQINEEYNQDKN 385 (519)
T ss_pred cceEEEEEcCCC-ChHHHHH-HHHHHHHHHh--h-CC-------CeEEEEEEecCch-hHHHHHHHHHHHHHhhhchhhh
Confidence 455555666699 9999998 8888888865 3 33 3688889998652 2234444555555433222111
Q ss_pred C------------------CCcceEEEEcCCCh--hHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCc
Q 003693 642 V------------------NSYLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 701 (802)
Q Consensus 642 ~------------------~~~lkVvFl~nY~v--slA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGa 701 (802)
. ......|.+.+|-. .+. ..+.-+.+...+|+ .|.=| .+|-|+--|.+.| .=|.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~-~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqI--nyg~ 459 (519)
T TIGR03713 386 FFSLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLI-SALDKLRLIIDLSK--EPDLY-TQISGISAGIPQI--NKVE 459 (519)
T ss_pred ccccchhhhhhhcccchhhcccccEEEEEecCCHHHHH-HHHhhheEEEECCC--CCChH-HHHHHHHcCCCee--ecCC
Confidence 1 10014688888887 777 77788888888888 88888 8888888888877 3332
Q ss_pred cccccccccCcceeecccccchHHHHhhhccCCCCCCChHHHHHHHHHH
Q 003693 702 NVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIR 750 (802)
Q Consensus 702 nvEi~e~~g~~n~fiFg~~~~ev~~~~~~~~~~~~~~~~~l~~v~~~m~ 750 (802)
. |+.+ ...||+|-|... ++.+... . | .-+...|-+....++.
T Consensus 460 ~-~~V~--d~~NG~li~d~~-~l~~al~-~-~-L~~~~~wn~~~~~sy~ 501 (519)
T TIGR03713 460 T-DYVE--HNKNGYIIDDIS-ELLKALD-Y-Y-LDNLKNWNYSLAYSIK 501 (519)
T ss_pred c-eeeE--cCCCcEEeCCHH-HHHHHHH-H-H-HhCHHHHHHHHHHHHH
Confidence 2 1112 237999985443 3333321 0 0 0132456666555555
No 105
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=34.62 E-value=68 Score=31.28 Aligned_cols=46 Identities=17% Similarity=0.026 Sum_probs=34.7
Q ss_pred CCceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcCceEEEeecCCchhhhhhccH
Q 003693 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQ 390 (802)
Q Consensus 331 ~~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~~~~vyTnHT~~~eglE~w~~ 390 (802)
.++++||+|++.++...+ ++ . .......+++|.|++.++-...+..
T Consensus 50 ~~~D~i~~~~~~~~~~~~-~~-~------------~~~~~~~~i~~~h~~~~~~~~~~~~ 95 (229)
T cd01635 50 FKPDVVHAHGYYPAPLAL-LL-A------------ARLLGIPLVLTVHGVNRSLLEGVPL 95 (229)
T ss_pred cCCCEEEEcCCCcHHHHH-HH-H------------HhhCCCCEEEEEcCccHhhcccCcH
Confidence 468999999999998855 11 1 1126788999999999998866654
No 106
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=31.89 E-value=85 Score=36.68 Aligned_cols=49 Identities=16% Similarity=0.116 Sum_probs=44.8
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEe
Q 003693 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 697 (802)
Q Consensus 647 kVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~t 697 (802)
.|+.+++|.....+.++.-||+.+-||. .|.=|.+-|.|+-+|-+.+|-
T Consensus 329 nvvly~~~~~~~l~~ly~~~dlyLdin~--~e~~~~al~eA~~~G~pI~af 377 (438)
T TIGR02919 329 NVKLYPNITTQKIQELYQTCDIYLDINH--GNEILNAVRRAFEYNLLILGF 377 (438)
T ss_pred CcEEECCcChHHHHHHHHhccEEEEccc--cccHHHHHHHHHHcCCcEEEE
Confidence 5999999999778899999999999999 999999999999999977665
No 107
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=30.18 E-value=1.5e+02 Score=33.17 Aligned_cols=111 Identities=10% Similarity=-0.058 Sum_probs=63.9
Q ss_pred HHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCe-EEEEEecCCCCCHHHHHHHHHHHHH
Q 003693 554 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPR-TIMIGGKAFATYTNAKRIVKLVNDV 632 (802)
Q Consensus 554 ~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~-~fIf~GKA~P~y~~aK~iIk~I~~v 632 (802)
+++|+ +|+.+++.++.|....|+... ++..+........ . ...+. .++++|+..+.+ +.+.+.
T Consensus 198 ~~~gl--~~~~~~il~~Gg~~g~~~~~~-li~~l~~~~~~~~-~-----~~~~~~~~vi~G~~~~~~-------~~L~~~ 261 (382)
T PLN02605 198 RELGM--DEDLPAVLLMGGGEGMGPLEE-TARALGDSLYDKN-L-----GKPIGQVVVICGRNKKLQ-------SKLESR 261 (382)
T ss_pred HHcCC--CCCCcEEEEECCCcccccHHH-HHHHHHHhhcccc-c-----cCCCceEEEEECCCHHHH-------HHHHhh
Confidence 35664 578899999999999888665 5444433211000 0 01134 477888763111 122221
Q ss_pred HHHhcCCcCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEee
Q 003693 633 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL 698 (802)
Q Consensus 633 a~~in~dp~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tl 698 (802)
+. .. +|.| .+|--.+. .++++||+....| .|..-+-+|.-|.+.|+|.
T Consensus 262 ~~--------~~--~v~~-~G~~~~~~-~l~~aaDv~V~~~------g~~ti~EAma~g~PvI~~~ 309 (382)
T PLN02605 262 DW--------KI--PVKV-RGFVTNME-EWMGACDCIITKA------GPGTIAEALIRGLPIILNG 309 (382)
T ss_pred cc--------cC--CeEE-EeccccHH-HHHHhCCEEEECC------CcchHHHHHHcCCCEEEec
Confidence 11 22 3433 33433344 5679999999533 2455688999999999986
No 108
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=29.33 E-value=71 Score=30.05 Aligned_cols=40 Identities=28% Similarity=0.379 Sum_probs=23.6
Q ss_pred hhcCCchhhhHHHhHHHHHhhhhcCccccCcCCccccccccCcccc
Q 003693 448 VVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRW 493 (802)
Q Consensus 448 i~~S~~VNgVS~lH~eilk~~~f~~~~~l~p~k~~~iTNGI~~rrW 493 (802)
...++.+-.||.--.+.+++ + .+-|+|+.=|-|||+..+.
T Consensus 137 ~~~~~~ii~vS~~~~~~l~~--~----~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 137 YKKADRIIAVSESTKDELIK--F----GIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HCCSSEEEESSHHHHHHHHH--H----T--SS-EEE----B-CCCH
T ss_pred HhcCCEEEEECHHHHHHHHH--h----CCcccCCEEEECCccHHHc
Confidence 44678888899987777774 3 3446889999999998653
No 109
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=29.10 E-value=65 Score=30.02 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=24.6
Q ss_pred CceEEeeCCCcccccHHHHHHHHHHhcCCChHHHHhhcC-ceEEEeecCC
Q 003693 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT-RTVAYTNHTV 380 (802)
Q Consensus 332 ~~~~iHlNDtHpalaipElmR~l~de~~l~~d~A~~i~~-~~~vyTnHT~ 380 (802)
+|++||+|...|...+.-++..+ .+ ..+++|.|..
T Consensus 74 ~~DvIh~h~~~~~~~~~~l~~~~--------------~~~~~~i~~~hg~ 109 (139)
T PF13477_consen 74 KPDVIHCHTPSPYGLFAMLAKKL--------------LKNKKVIYTVHGS 109 (139)
T ss_pred CCCEEEEecCChHHHHHHHHHHH--------------cCCCCEEEEecCC
Confidence 58999999999853334444333 44 6889999954
No 110
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=28.44 E-value=1.7e+02 Score=31.70 Aligned_cols=72 Identities=11% Similarity=0.034 Sum_probs=43.5
Q ss_pred eEEEEcCCChhHHhhhcccccccccCCCCCccCCCcccchhhccCceEEEeecCc--------cccccccccCcceeecc
Q 003693 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA--------NVEIRQEIGEENFFLFG 718 (802)
Q Consensus 647 kVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASGTs~MKa~lNGal~i~tlDGa--------nvEi~e~~g~~n~fiFg 718 (802)
+|.|+. |- .-...++++||+....| | |+.-+-+|..|.+.|++..+. +.+...+ .++++++.
T Consensus 236 ~v~~~g-~~-~~~~~~l~~ad~~v~~s--g----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~--~g~g~~v~ 305 (350)
T cd03785 236 NYEVFP-FI-DDMAAAYAAADLVISRA--G----ASTVAELAALGLPAILIPLPYAADDHQTANARALVK--AGAAVLIP 305 (350)
T ss_pred CeEEee-hh-hhHHHHHHhcCEEEECC--C----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh--CCCEEEEe
Confidence 455544 33 34456779999998432 2 244578999999999986543 1222222 25778887
Q ss_pred cc---cchHHHHh
Q 003693 719 AV---AEQVPKLR 728 (802)
Q Consensus 719 ~~---~~ev~~~~ 728 (802)
.. .+++.+..
T Consensus 306 ~~~~~~~~l~~~i 318 (350)
T cd03785 306 QEELTPERLAAAL 318 (350)
T ss_pred cCCCCHHHHHHHH
Confidence 53 45555544
No 111
>PF14407 Frankia_peptide: Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
Probab=25.36 E-value=20 Score=30.73 Aligned_cols=41 Identities=22% Similarity=0.236 Sum_probs=34.7
Q ss_pred ehhccccchhHHhhccChHHHHHHHHHhcCCChHHHHhhcc
Q 003693 92 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEK 132 (802)
Q Consensus 92 mEfl~Gr~L~nnl~NLg~~~~~~eaL~~~g~~~~~l~~~E~ 132 (802)
||.+|||.+...=....+...-.+|.++.++..++|...|.
T Consensus 2 ~e~lIgrAv~D~~FRqqllad~~~A~~~Y~Lt~eeL~al~~ 42 (61)
T PF14407_consen 2 VERLIGRAVTDEAFRQQLLADPEEACKEYDLTPEELQALER 42 (61)
T ss_pred HHHHHHHHHcCHHHHHHHhcCHHHHHhhCCCCHHHHHHHHH
Confidence 78999999987777666677778899999999999999885
No 112
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=24.98 E-value=39 Score=36.66 Aligned_cols=55 Identities=24% Similarity=0.381 Sum_probs=39.6
Q ss_pred ChHHHHHHHHHhcCCChHHHHhhc--cccCCCCCCcccchhhhHhhhh-ccCCCeEEEee
Q 003693 108 DIQNAYADALNNLGHVLEEIAEQE--KDAALGNGGLGRLASCFLDSMA-TLNLPAWGYGL 164 (802)
Q Consensus 108 g~~~~~~eaL~~~g~~~~~l~~~E--~d~~LgnGGLGrLAac~ldS~a-~l~~p~~g~Gi 164 (802)
.|...++++|++.|++++||-..= .=||++ +|| |.+..+.+.+| .+++|++|+.=
T Consensus 32 ~L~~~i~~~l~~~~~~~~did~iavt~GPGsf-tgL-rvG~~~Ak~La~~~~~Pli~v~~ 89 (268)
T PF00814_consen 32 NLPPLIEELLKEAGISLSDIDAIAVTRGPGSF-TGL-RVGLSFAKGLALALNIPLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHHTS-GGGESEEEEEEESS-H-HHH-HHHHHHHHHHHHHTT--EEEEEH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCCcc-ccc-HHHHHHHHHHHHHhCCCeEeecc
Confidence 356789999999999999776553 334555 477 88889999988 49999999863
No 113
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=24.72 E-value=59 Score=30.54 Aligned_cols=37 Identities=32% Similarity=0.372 Sum_probs=25.8
Q ss_pred CCceEEeeCCCc---ccccHHHHHHHHHHhcCCChHHHHhhcCc
Q 003693 331 PSKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTR 371 (802)
Q Consensus 331 ~~~~~iHlNDtH---palaipElmR~l~de~~l~~d~A~~i~~~ 371 (802)
..++.|||+.++ +++++..+|+ ..+++.++|++.++.
T Consensus 81 ~~~vlVHC~~G~~Rs~~~~~~~l~~----~~~~~~~~a~~~vr~ 120 (139)
T cd00127 81 GGKVLVHCLAGVSRSATLVIAYLMK----TLGLSLREAYEFVKS 120 (139)
T ss_pred CCcEEEECCCCCchhHHHHHHHHHH----HcCCCHHHHHHHHHH
Confidence 468999999998 3344344443 458889999876554
No 114
>PF09659 Cas_Csm6: CRISPR-associated protein (Cas_Csm6)
Probab=23.38 E-value=30 Score=39.61 Aligned_cols=22 Identities=41% Similarity=0.539 Sum_probs=19.3
Q ss_pred cccccccccCCCCCccCCCcccchhhcc
Q 003693 663 IPGSELSQHISTAGMEASGTSNMKFSLN 690 (802)
Q Consensus 663 ipgaDv~l~iS~a~~EASGTs~MKa~lN 690 (802)
.|.+++.+|+| |||.|||++|-
T Consensus 38 ~~d~eilLNlS------SGTPqmks~L~ 59 (382)
T PF09659_consen 38 YPDDEILLNLS------SGTPQMKSALF 59 (382)
T ss_pred CCCCeEEEeCC------CCHHHHHHHHH
Confidence 39999999998 79999999863
No 115
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=22.84 E-value=2.3e+02 Score=31.08 Aligned_cols=100 Identities=11% Similarity=-0.012 Sum_probs=59.5
Q ss_pred CCCcceeeccccchhhhhhh-hhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHHHHHHHHHHHHHHhcCC
Q 003693 561 DPNSLFDIQVKRIHEYKRQL-LNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (802)
Q Consensus 561 dp~~lfd~~vkR~heYKRq~-Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK~iIk~I~~va~~in~d 639 (802)
+++..++.++.|....|... + +...+..+ .. .|..+++.|.+.. +. +.+.+ + .
T Consensus 180 ~~~~~~i~~~gg~~~~~~~~~~-l~~a~~~~---~~---------~~~~~~~~G~g~~--~~---~~~~~----~-~--- 233 (357)
T PRK00726 180 REGKPTLLVVGGSQGARVLNEA-VPEALALL---PE---------ALQVIHQTGKGDL--EE---VRAAY----A-A--- 233 (357)
T ss_pred CCCCeEEEEECCcHhHHHHHHH-HHHHHHHh---hh---------CcEEEEEcCCCcH--HH---HHHHh----h-c---
Confidence 45667778888887777543 3 33444333 22 1456777787752 11 11111 1 1
Q ss_pred cCCCCcceEEEEcCCChhHHhhhcccccccccCCCCCccCCC-cccchhhccCceEEEeecC
Q 003693 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASG-TSNMKFSLNGCLIIGTLDG 700 (802)
Q Consensus 640 p~~~~~lkVvFl~nY~vslA~~iipgaDv~l~iS~a~~EASG-Ts~MKa~lNGal~i~tlDG 700 (802)
+ ++ |.+.+|- +--..++++||+.... || ..-+-+|.-|.+.|++..|
T Consensus 234 ---~--~~-v~~~g~~-~~~~~~~~~~d~~i~~-------~g~~~~~Ea~~~g~Pvv~~~~~ 281 (357)
T PRK00726 234 ---G--IN-AEVVPFI-DDMAAAYAAADLVICR-------AGASTVAELAAAGLPAILVPLP 281 (357)
T ss_pred ---C--Cc-EEEeehH-hhHHHHHHhCCEEEEC-------CCHHHHHHHHHhCCCEEEecCC
Confidence 1 13 4455664 4456889999999853 34 3456899999999998764
No 116
>TIGR02672 cas_csm6 CRISPR-associated protein, Csm6 family. Members of this family as found in CRISPR-associated (cas) gene regions in Streptococcus thermophilus CNRZ1066, Staphylococcus epidermidis RP62A, and Mycobacterium tuberculosis (strains CDC1551 and H37Rv), as part of Mtube-type CRISPR/Cas systems. CRISPR is a widespread form of direct repeat found in archaea and bacteria, with distinctive subtypes each of which has a characteristic sporadic distribution.
Probab=22.63 E-value=34 Score=38.68 Aligned_cols=33 Identities=30% Similarity=0.355 Sum_probs=26.0
Q ss_pred cccccccccCCCCCccCCCcccchhhcc----------CceEEEeecCc
Q 003693 663 IPGSELSQHISTAGMEASGTSNMKFSLN----------GCLIIGTLDGA 701 (802)
Q Consensus 663 ipgaDv~l~iS~a~~EASGTs~MKa~lN----------Gal~i~tlDGa 701 (802)
.|.+++-+|.| |||.|||++|- =++.|+|-.|+
T Consensus 41 ~~d~EilLNlS------SGTPQMKSaL~~i~~~~~~~~k~IQV~TP~~~ 83 (362)
T TIGR02672 41 YPDREIILNTS------SGTPQMQSALVAINVFGIPNTKAVQVSTPARA 83 (362)
T ss_pred CCCCeEEEECC------CCcHHHHHHHHHHHhccccCceEEEeeCCCCc
Confidence 59999999997 79999999873 24566777763
No 117
>COG5405 HslV ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Posttranslational modification, protein turnover, chaperones]
Probab=21.65 E-value=64 Score=32.91 Aligned_cols=39 Identities=28% Similarity=0.400 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCChH----HHHhhcCceEEEeecCCchhhhh
Q 003693 348 PELMRLLMDEEGLGWD----EAWDITTRTVAYTNHTVLPEALE 386 (802)
Q Consensus 348 pElmR~l~de~~l~~d----~A~~i~~~~~vyTnHT~~~eglE 386 (802)
+.-+|-|++-.+++-. .+++|....|+||||++.-|-+|
T Consensus 134 l~AarAl~~~~~lsA~eIa~~sl~iA~eiciyTN~ni~ve~l~ 176 (178)
T COG5405 134 LSAARALMENTELSAREIAEKSLKIAGDICIYTNHNIVVEELR 176 (178)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHhhhheEEEecCCcEEEEEee
Confidence 4558888887677765 57788999999999999877553
No 118
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=21.50 E-value=1.2e+02 Score=28.24 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=27.1
Q ss_pred CceEEeeCCCc---ccccHHHHHHHHHHhcCCChHHHHhhcCc
Q 003693 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTR 371 (802)
Q Consensus 332 ~~~~iHlNDtH---palaipElmR~l~de~~l~~d~A~~i~~~ 371 (802)
.++.|||..+. |++++..|| ...+++.++|++.++.
T Consensus 74 ~~VlVHC~~G~~RS~~v~~ayLm----~~~~~~~~~A~~~v~~ 112 (133)
T PF00782_consen 74 GKVLVHCKAGLSRSGAVAAAYLM----KKNGMSLEEAIEYVRS 112 (133)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHH----HHHTSSHHHHHHHHHH
T ss_pred ceeEEEeCCCcccchHHHHHHHH----HHcCCCHHHHHHHHHH
Confidence 56899999998 676755554 4568899999976644
No 119
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism]
Probab=20.47 E-value=8.9e+02 Score=28.84 Aligned_cols=134 Identities=17% Similarity=0.241 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCcceeeccccchhhhhhhhhhhhHHHHHHHHHhcCcccccCCCCeEEEEEecCCCCCHHHH
Q 003693 544 SKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAK 623 (802)
Q Consensus 544 nK~~L~~~i~~~~g~~vdp~~lfd~~vkR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~fIf~GKA~P~y~~aK 623 (802)
.++...+|+.++++++.... .|+.|+....+.+... .-..|+.+-.-||=.+--..=-
T Consensus 258 ~~q~~~e~l~~~L~L~~~~~-------------~~~~l~~W~~~~~~~d---------~~~~~V~IalVGKYt~l~DsY~ 315 (585)
T KOG2387|consen 258 EEQGIVEYLNRRLGLSIISS-------------ERPMLDKWSNMAERYD---------DLQVPVRIALVGKYTKLSDSYL 315 (585)
T ss_pred hhhhHHHHHHHHhCCCcccc-------------chhhHHHHHHHHHhhh---------cccCcEEEEEEeccccchHHHH
Confidence 45567888888988754322 2255545444443322 1235899999999888777767
Q ss_pred HHHHHHHHHHHHhcCCcCCCCcceEEEEcCCCh------------hHHhhhcccccccccCCCCCccCCCcccchhhc--
Q 003693 624 RIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNV------------SVAELLIPGSELSQHISTAGMEASGTSNMKFSL-- 689 (802)
Q Consensus 624 ~iIk~I~~va~~in~dp~~~~~lkVvFl~nY~v------------slA~~iipgaDv~l~iS~a~~EASGTs~MKa~l-- 689 (802)
.++|.+..-|-.+ +.||.|.+++.=+. .-|=.++.+||=-+-|- |+-.-|+.+|..+.
T Consensus 316 Sv~KAL~Ha~~~~------~~kl~i~wi~s~dLE~~t~~e~~~~~~~aW~~l~~adGilvPG--GFG~RGveG~i~Aak~ 387 (585)
T KOG2387|consen 316 SVVKALEHAALAI------NRKLEIVWIDSSDLEPETEQEDPRKYHAAWQKLKSADGILVPG--GFGDRGVEGKILAAKW 387 (585)
T ss_pred HHHHHHHHHHHHh------cccceEEEEehhcccccccccChhHHHHHHHHhccCCeEEeCC--cccccchhHHHHHHHH
Confidence 7888888777666 77889999876433 33556677788777665 48889999997664
Q ss_pred ---cCceEEEeecC---ccccccc
Q 003693 690 ---NGCLIIGTLDG---ANVEIRQ 707 (802)
Q Consensus 690 ---NGal~i~tlDG---anvEi~e 707 (802)
|+.+-+|..=| |+||...
T Consensus 388 ARen~iP~LGiCLGmQ~AvIEfaR 411 (585)
T KOG2387|consen 388 ARENKIPFLGICLGMQLAVIEFAR 411 (585)
T ss_pred HHhcCCCeEeeehhhhHHHHHHHH
Confidence 89999999999 7777643
Done!