Query 003693
Match_columns 802
No_of_seqs 215 out of 1251
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 18:37:03 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003693.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1741-1745//hhsearch_pdb/003693hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 1.0 1 1 1898.9 56.7 764 27-801 39-841 (879)
2 2gj4_A Glycogen phosphorylase, 1.0 1 1 1808.8 64.7 771 17-801 1-783 (824)
3 1l5w_A Maltodextrin phosphoryl 1.0 1 1 1790.1 56.0 753 25-801 3-761 (796)
4 2c4m_A Glycogen phosphorylase; 1.0 1 1 1764.1 56.0 745 27-801 4-755 (796)
5 3vue_A GBSS-I, granule-bound s 1.0 1 1 331.6 14.5 469 137-768 24-513 (536)
6 3nb0_A Glycogen [starch] synth 1.0 1 1 194.6 14.6 361 299-768 159-635 (725)
7 1rzu_A Glycogen synthase 1; gl 1.0 1 1 146.9 4.1 333 331-769 129-478 (485)
8 2qzs_A Glycogen synthase; glyc 1.0 1 1 145.7 6.1 332 331-768 128-478 (485)
9 3fro_A GLGA glycogen synthase; 1.0 1 1 119.0 15.0 326 300-769 99-433 (439)
10 3s28_A Sucrose synthase 1; gly 1.0 1 1 117.7 4.8 332 331-768 406-771 (816)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=1.00 E-value=1 Score=1898.94 Aligned_cols=764 Identities=48% Similarity=0.827 Sum_probs=736.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCHHHHHHC
Q ss_conf 99789999999999756898999999788999999999999999999985410137995689987011013103678510
Q 003693 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (802)
Q Consensus 27 ~~~~~~k~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyylS~Efl~gr~L~n~l~n 106 (802)
.++++|+++|.+||++++|+++.+|+..++|.|+|.+|||+++++|.+|++.+.+.+.|+||||||||||||+|.|||+|
T Consensus 39 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~W~~t~~~~~~~~~k~vyYlS~EFL~Gr~L~n~l~n 118 (879)
T 1ygp_A 39 NKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALIN 118 (879)
T ss_dssp CSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH
T ss_conf 57999999999999997499925599999999999999999999999999876436887399981364235678879986
Q ss_pred CCHHHHH-------------HHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEE
Q ss_conf 6708999-------------999996299957888300125789998400155348654216998189862568864127
Q 003693 107 LDIQNAY-------------ADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQ 173 (802)
Q Consensus 107 Lg~~~~~-------------~e~L~~lg~~~~~i~~~E~d~~LgnGGLGrLA~~~ldS~a~l~~p~~G~Gl~Y~~G~F~Q 173 (802)
||+++++ ++||+++|+++++|+++|+||||||||||||||||||||||||+|++||||||+||||+|
T Consensus 119 lg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q 198 (879)
T 1ygp_A 119 MKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQ 198 (879)
T ss_dssp CCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEE
T ss_pred CCCHHHHCHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEE
T ss_conf 67743313121146615679999987299999998538898867771788899999999747998479872343786378
Q ss_pred EEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEE--CC-CCCE--EEECCEEEEEEEEEECCCCCCCCCEEEEE
Q ss_conf 8518905320411003699851013780589985994787--59-9934--55389689999964136888988617899
Q 003693 174 KITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV--NP-NGTR--KWVGGEVVQAVAYDIPIPGYKTKNTISLR 248 (802)
Q Consensus 174 ~i~dG~Q~e~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~--~~-~g~~--~w~~~~~v~av~yd~~i~g~~~~~~~~lr 248 (802)
+|.||||+|.||+|+.+|||||++|++.+++|+|+|+|+. +. +|+. .|++++.|.|+|||+|||||+++++|+||
T Consensus 199 ~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lR 278 (879)
T 1ygp_A 199 KIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLR 278 (879)
T ss_dssp EEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEE
T ss_pred EEECCEEEEECCCHHCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCEEEEE
T ss_conf 82388368736522104994222577726898508877643546788501476078379999821564676778558999
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99945188776544569611466775344200433301578984001141222545766616999999999714674433
Q 003693 249 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWS 328 (802)
Q Consensus 249 lw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRL~Qe~fl~~a~lqdi~r~~~~~~g~~~l~ 328 (802)
||++++++ .|+|..||.|+|.+|+++++.+|+||++|||+|++++||+|||+||||||+||+|||+|+|++.++ +|+
T Consensus 279 LW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~~--~l~ 355 (879)
T 1ygp_A 279 LWQARPTT-EFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSKR--PWT 355 (879)
T ss_dssp EEEEEESC-SCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CGG
T ss_pred EEEECCCC-CCCHHHCCCCCHHHHHHCHHHHHCHHCCCCCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHCC--CHH
T ss_conf 88715674-035321267657676557375604420677999986445452001445364689999999998189--855
Q ss_pred CCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCHHHHHHHHHHH
Q ss_conf 58975089617985432089999998974099967887501750898615981134410439999963145799999999
Q 003693 329 EFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEID 408 (802)
Q Consensus 329 ~l~~~~viHlND~Hpalai~EllR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~~eglE~~~~~l~~~~lpr~~~ii~~in 408 (802)
.|+++++||||||||||+||||||+|+|++|++|++||+||+++|+||||||+|||+|+||++|++++||||++||++||
T Consensus 356 ~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein 435 (879)
T 1ygp_A 356 EFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDIN 435 (879)
T ss_dssp GHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHH
T ss_pred HCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCHHHHCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf 65885199816980888899999997541189999999999875100067686576553889999987784899999999
Q ss_pred HHHHHHHHHHCCCCCCHHCCCCCCCCCCCCC--CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCCC
Q ss_conf 9999999974799800000134324799999--2101130001188316267785999976220591111768-865411
Q 003693 409 KRFIAMVRSTRSDLESKIPSMCILDNNPKKP--VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPN-KLQNKT 485 (802)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~--~vnMa~lai~~S~~vNgVS~lH~ei~k~~~f~~~~~l~p~-k~~~iT 485 (802)
.+|++.++.++|.|.+++.+||++++ +++ +||||+||+++||+|||||++|++++|+++|++|+.+||+ ||.|||
T Consensus 436 ~~f~~~~~~~~~~d~~~~~~l~ii~~--~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~T 513 (879)
T 1ygp_A 436 WFFLEDVAKKFPKDVDLLSRISIIEE--NSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVT 513 (879)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHCSEEC--CSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECC
T ss_pred HHHHHHHHHHCCCCHHHHHHCCEECC--CCCCCEEEHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99999999876998999975122136--8875404238999973580247527778888887768788748887566827
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCC--CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCC-
Q ss_conf 35674333455693379999975186--400038014874200599978999999999999999999999993-99789-
Q 003693 486 NGITPRRWLRFCNPELSKIITKWLKT--DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-GVTID- 561 (802)
Q Consensus 486 NGV~~rrWl~~~Np~l~~li~~~~g~--~~w~~~~~~l~~l~~~~dd~~~~~~~~~~K~~nK~~L~~~i~~~~-g~~id- 561 (802)
||||+|||+.+|||+|++||++++|+ ++|.+++++|++|.++++|++|+++|+++|++||++|++||++++ |+.+|
T Consensus 514 NGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~ 593 (879)
T 1ygp_A 514 NGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIIN 593 (879)
T ss_dssp CCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSC
T ss_pred CCCCCCHHHHHCCHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
T ss_conf 99187413554198899999986298805545488999998862996999999999999999999999999758967158
Q ss_pred ----CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC------CCC-CCCCCCEEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf ----996035105431022232244455899999987119------111-169889599998228989988999999999
Q 003693 562 ----PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMS------PQE-RKKTTPRTIMIGGKAFATYTNAKRIVKLVN 630 (802)
Q Consensus 562 ----p~~l~d~~vkR~~eYKRq~Lnil~~i~~~~~i~~~~------~~~-~~~~~P~q~IfaGKA~P~y~~aK~iIk~I~ 630 (802)
|+++||||||||||||||+||+|+++++|.+|+. + |+. +.+++|+||||||||||+|.+||.|||+|+
T Consensus 594 ~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~ 672 (879)
T 1ygp_A 594 REYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-MLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLIN 672 (879)
T ss_dssp STTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 88999722565410214767778898777999999982-76545787533367798189996268878688999999999
Q ss_pred HHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 99888618957799216999838896678521456422345787875678853003441585279951485210000136
Q 003693 631 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG 710 (802)
Q Consensus 631 ~~a~~in~dp~v~~~lkVvFl~nY~vslA~~ii~gaDi~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g 710 (802)
++|++|||||+|+++|||||+|||||++|++|+|||||||||||||+||||||||||||||+|||||+|||||||.+++|
T Consensus 673 ~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG 752 (879)
T 1ygp_A 673 CVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIG 752 (879)
T ss_dssp HHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHC
T ss_pred HHHHHHCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCC
T ss_conf 99988516731189548999289987999875004456541899972235842568997487044134535678788708
Q ss_pred CCCEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCC---CHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
Q ss_conf 75242112210128887650148999999489999999982999999---909999998527899989722015770789
Q 003693 711 EENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSY---DYNPLLDSLEGNTGYGRGDYFLVGYDFPSY 787 (802)
Q Consensus 711 ~~n~flFg~~~~ev~~~~~~~~~~~~~~~~~l~~v~~~m~~~~fs~~---~y~~ly~~l~~~~~~~~~D~~~~~~Df~~y 787 (802)
++|+|+||.+++||..++.++....|+.++.++.|+++|.+|+||+. +|.+||++|+.+ +|+|+|++||+||
T Consensus 753 ~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~L~~~-----~D~y~vl~Df~sY 827 (879)
T 1ygp_A 753 EDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYH-----GDYYLVSDDFESY 827 (879)
T ss_dssp GGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHHHHHS-----TTTTCHHHHHHHH
T ss_pred CCCEEECCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC-----CCEEEEECCHHHH
T ss_conf 66579806888999999872953103789899999999955998999837899999998517-----9847885648999
Q ss_pred HHHHHHHHHHHCCC
Q ss_conf 99999999772059
Q 003693 788 LEAQDRVDQAYKRS 801 (802)
Q Consensus 788 ~~~~~~~~~~y~d~ 801 (802)
++||++|+++|+|+
T Consensus 828 ~~~q~~v~~~Y~d~ 841 (879)
T 1ygp_A 828 LATHELVDQEFHNQ 841 (879)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCC
T ss_conf 99999999986695
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=1.00 E-value=1 Score=1808.78 Aligned_cols=771 Identities=47% Similarity=0.798 Sum_probs=732.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCC
Q ss_conf 65544699999978999999999975689899999978899999999999999999998541013799568998701101
Q 003693 17 KIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQ 96 (802)
Q Consensus 17 ~~~~~~~~~~~~~~~~k~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyylS~Efl~ 96 (802)
||++.......++++|+++|.+||++++|+++.+|+++++|.|||++|||+++++|++|++.+.+.+.|+||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~Efl~ 80 (824)
T 2gj4_A 1 QISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYM 80 (824)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCC
T ss_conf 94300021433389999999999999858993669999999999999999999999987898760588648998224302
Q ss_pred CCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEE
Q ss_conf 31036785106708999999996299957888300125789998400155348654216998189862568864127851
Q 003693 97 GRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKIT 176 (802)
Q Consensus 97 gr~L~n~l~nLg~~~~~~e~L~~lg~~~~~i~~~E~d~~LgnGGLGrLA~~~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~ 176 (802)
||+|.|||+|||+++++++||+++|+++++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+
T Consensus 81 gr~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~ 160 (824)
T 2gj4_A 81 GRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC 160 (824)
T ss_dssp ECCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEE
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEE
T ss_conf 45667899877887999999998099999998447886768872778799899989757998378841306887069845
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCEEEECCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCC
Q ss_conf 89053204110036998510137805899859947875999345538968999996413688898861789999945188
Q 003693 177 KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASA 256 (802)
Q Consensus 177 dG~Q~e~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~~i~g~~~~~~~~lrlw~a~v~~ 256 (802)
||||+|.||+|++.|||||++|++.+++|+|+|+|+...+| .+|++.+.|.|+|||+|||||++++||+||||+++ +.
T Consensus 161 dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g-~~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~-~~ 238 (824)
T 2gj4_A 161 GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQG-AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-AP 238 (824)
T ss_dssp TTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSS-EEEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CC
T ss_pred CCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCC-CEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEEE-CC
T ss_conf 89888707640136996420477736899738877754899-54325614897634677678778845999999963-67
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CC-----CCCCCC
Q ss_conf 776544569611466775344200433301578984001141222545766616999999999714-67-----443358
Q 003693 257 EDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK-SG-----RQWSEF 330 (802)
Q Consensus 257 ~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRL~Qe~fl~~a~lqdi~r~~~~~~-g~-----~~l~~l 330 (802)
..|++..||.|+|..++.+.+.+++||++|||+|++++||+|||+||||||+||+|||+|+|++.+ |. .+++.+
T Consensus 239 ~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~ 318 (824)
T 2gj4_A 239 NDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAF 318 (824)
T ss_dssp C----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGH
T ss_pred CCCCHHHCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHC
T ss_conf 55565532676398998635615420768899997543376763245554413899999999973236433445542115
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 97508961798543208999999897409996788750175089861598113441043999996314579999999999
Q 003693 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (802)
Q Consensus 331 ~~~~viHlND~Hpalai~EllR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~~eglE~~~~~l~~~~lpr~~~ii~~in~~ 410 (802)
++|++||||||||||++|||||+++|++|++|++||++|+++|+||||||+|||+|+||+++++++||||++||++||.+
T Consensus 319 ~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~ 398 (824)
T 2gj4_A 319 PDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQR 398 (824)
T ss_dssp HHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCHHHHHHHCHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 77767971698418699999999877517887899998367589983797588865454999998675598999998799
Q ss_pred HHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999974799800000134324799999210113000118831626778599997622059111176886541135674
Q 003693 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 490 (802)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~ei~k~~~f~~~~~l~p~k~~~iTNGV~~ 490 (802)
|+..++.++|.+.+.+.+++++++ ...++||||++||++||+|||||++|++++|+.+|++|+.++|++|.|||||||+
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~-~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~ 477 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEE-GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITP 477 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEEC-SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCT
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHH-CCCCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCH
T ss_conf 999999876995899976655440-5788342899999834843457488999985577678887070120245378275
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC
Q ss_conf 33345569337999997518640003801487420059997899999999999999999999999399789996035105
Q 003693 491 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 570 (802)
Q Consensus 491 rrWl~~~Np~l~~li~~~~g~~~w~~~~~~l~~l~~~~dd~~~~~~~~~~K~~nK~~L~~~i~~~~g~~idp~~l~d~~v 570 (802)
|||+.+|||+++++|++++| ++|.+|++++++|.++++|++|+++|+++|++||.+|++++++++|+.+||++||||||
T Consensus 478 rrWl~~~NP~l~~lI~~~ig-~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~v 556 (824)
T 2gj4_A 478 RRWLVLCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQV 556 (824)
T ss_dssp CCCCCCTCHHHHHHHHHHHC-SGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEE
T ss_pred HHHCCCCCHHHHHHHHHHCC-CHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf 66401479768898988557-15320878899888516618999999999999789989999999699868995567666
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 43102223224445589999998711911116988959999822898998899999999999888618957799216999
Q 003693 571 KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 650 (802)
Q Consensus 571 kR~~eYKRq~Lnil~~i~~~~~i~~~~~~~~~~~~P~q~IfaGKA~P~y~~aK~iIk~I~~~a~~in~dp~v~~~lkVvF 650 (802)
|||||||||+||+|+++++|.+|+. +|.. +++|+||||+|||||+|++||.|||+|+++++++||||+|+++|||||
T Consensus 557 kRl~eYKRq~L~~l~~i~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvF 633 (824)
T 2gj4_A 557 KRIHEYKRQLLNCLHVITLYNRIKK-EPNK--FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIF 633 (824)
T ss_dssp SCCCGGGTHHHHHHHHHHHHHHHHH-CTTS--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEE
T ss_pred ECCHHHCCHHHHHHHHHHHHHHHHH-CCCC--CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf 2032413430688879999999982-8888--889979999970777579889999999999998625845599607999
Q ss_pred ECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHH
Q ss_conf 83889667852145642234578787567885300344158527995148521000013675242112210128887650
Q 003693 651 VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE 730 (802)
Q Consensus 651 l~nY~vslA~~ii~gaDi~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~flFg~~~~ev~~~~~~ 730 (802)
+|||||++||+|+|||||||||||||+||||||||||||||+|||||+|||||||.+++|.+|||+||.+++++..++..
T Consensus 634 l~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev~~l~~~ 713 (824)
T 2gj4_A 634 LENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQR 713 (824)
T ss_dssp ETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCEEEECCCHHHHHHHHHC
T ss_conf 78999899999864122312589998787765778999869649998468562123105888779937858999999975
Q ss_pred CCCCC---CCCCHHHHHHHHHHHCCCCCCCC---HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 14899---99994899999999829999999---0999999852789998972201577078999999999772059
Q 003693 731 REDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKRS 801 (802)
Q Consensus 731 ~~~~~---~~~~~~l~~v~~~m~~~~fs~~~---y~~ly~~l~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~y~d~ 801 (802)
.|++ |+.++.++++++.+.++.|||++ |.+||++|+. +|+|||++||+||++||++|++.|.|+
T Consensus 714 -~~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~------~D~~~~~~Df~~y~~~q~~v~~~y~d~ 783 (824)
T 2gj4_A 714 -GYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH------HDRFKVFADYEEYVKCQERVSALYKNP 783 (824)
T ss_dssp -CCCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH------CCTTCTGGGHHHHHHHHHHHHHHHTCH
T ss_pred -CCCHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf -8797888537999999999997288899984889999999872------782566620899999999998751498
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=1.00 E-value=1 Score=1790.13 Aligned_cols=753 Identities=43% Similarity=0.726 Sum_probs=722.0
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCHHHHH
Q ss_conf 99997899999999997568989999997889999999999999999999854101379956899870110131036785
Q 003693 25 LANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAI 104 (802)
Q Consensus 25 ~~~~~~~~k~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyylS~Efl~gr~L~n~l 104 (802)
...++++|+++|.+||++++|+++.+|++.++|.|+|.+|||++.++|.+|++ .+.|+||||||||||||+|.|||
T Consensus 3 ~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~~rd~l~~~w~~t~~----~~~k~v~Y~S~Efl~gr~L~n~l 78 (796)
T 1l5w_A 3 PIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNL 78 (796)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC----CCCCEEEEEEHHHHHHHHHHHHH
T ss_conf 55569999999999999974999376999999999999999999878887414----67863899834774788888788
Q ss_pred HCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEECC
Q ss_conf 10670899999999629995788830012578999840015534865421699818986256886412785189053204
Q 003693 105 GSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVA 184 (802)
Q Consensus 105 ~nLg~~~~~~e~L~~lg~~~~~i~~~E~d~~LgnGGLGrLA~~~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~e~p 184 (802)
+|||+++++++||+++|+++++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.|
T Consensus 79 ~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~ 158 (796)
T 1l5w_A 79 LNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAP 158 (796)
T ss_dssp HHHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEEC
T ss_pred HHCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCEEEEEC
T ss_conf 85675899999999809998999852888676787377879999998974799827886213277626870288568716
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCEEEECCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCC
Q ss_conf 11003699851013780589985994787599934553896899999641368889886178999994518877654456
Q 003693 185 EDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQF 264 (802)
Q Consensus 185 d~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~ 264 (802)
|+|++.|+|||+.|++.+++|+|+|+++. + + +|+++++|.|+|||+|||||+++++|+||||+|++++ .|+|..|
T Consensus 159 d~wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~f 233 (796)
T 1l5w_A 159 DDWHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKF 233 (796)
T ss_dssp CCCCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS-CCCHHHH
T ss_pred CCCCCCCCCCEEECCCCEEEEEECCEEEE--C-C-EECCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCC-CCCHHHC
T ss_conf 76334799622406882799860998854--1-2-2048826999980056367777745999998824686-3475432
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 96114667753442004333015789840011412225457666169999999997146744335897508961798543
Q 003693 265 NDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPT 344 (802)
Q Consensus 265 ~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRL~Qe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~Hpa 344 (802)
+.|+|..|+++++.+|+||++|||+|++++||+|||+||||||+|++|+|+|+|++.++ +++.|++|++|||||||||
T Consensus 234 n~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~~~~l~~p~viHlNDtHpa 311 (796)
T 1l5w_A 234 NDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAGR--KLHELADYEVIQLNDTHPT 311 (796)
T ss_dssp HTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CGGGHHHHEEEEEESSTTT
T ss_pred CCCCHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHCCCCCEEEECCCCCH
T ss_conf 77657666556476743664476999864439889987999999999999999987089--8445587618984488428
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 20899999989740999678875017508986159811344104399999631457999999999999999974799800
Q 003693 345 LAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLES 424 (802)
Q Consensus 345 lai~EllR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~~eglE~~~~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~ 424 (802)
|++|||||+++|++|++|++||+||+++|+||||||+|||+|+||+++++++||||++||++||.+|++++..++|.|++
T Consensus 312 l~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~ 391 (796)
T 1l5w_A 312 IAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK 391 (796)
T ss_dssp THHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHH
T ss_conf 68999999986641798789999861227788568717666308999999875798888716699999999986598288
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 00013432479999921011300011883162677859999762205911117688654113567433345569337999
Q 003693 425 KIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKI 504 (802)
Q Consensus 425 ~~~~l~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~ei~k~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~l 504 (802)
.+.+++++++ ++||||++||++||+|||||++|++++|+++|++|+.++|+||.|||||||+|||+.+|||+++++
T Consensus 392 ~~~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~l 467 (796)
T 1l5w_A 392 VWAKLAVVHD----KQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAAL 467 (796)
T ss_dssp HHHHHCSEET----TEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHH
T ss_pred HHHHHHCCCC----CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHH
T ss_conf 7743122107----954489999984371133138999998767766798707663388848884778500259768899
Q ss_pred HHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHH
Q ss_conf 99751864000380148742005999789999999999999999999999939978999603510543102223224445
Q 003693 505 ITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNIL 584 (802)
Q Consensus 505 i~~~~g~~~w~~~~~~l~~l~~~~dd~~~~~~~~~~K~~nK~~L~~~i~~~~g~~idp~~l~d~~vkR~~eYKRq~Lnil 584 (802)
|++++| ++|.+|++.|++|.++++|++|+++|+++|++||++|++++++++|+.+||++|||||||||||||||+||+|
T Consensus 468 i~~~~g-~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil 546 (796)
T 1l5w_A 468 LDKSLQ-KEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLL 546 (796)
T ss_dssp HHHHCS-SCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHH
T ss_pred HHHHCC-CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCCCEEHH
T ss_conf 998549-6011488999988853997899999999999999999999999839985999666766630535415487089
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCC
Q ss_conf 58999999871191111698895999982289899889999999999988861895779921699983889667852145
Q 003693 585 GAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIP 664 (802)
Q Consensus 585 ~~i~~~~~i~~~~~~~~~~~~P~q~IfaGKA~P~y~~aK~iIk~I~~~a~~in~dp~v~~~lkVvFl~nY~vslA~~ii~ 664 (802)
+++++|.+||. +|.. +++|+||||+|||||+|++||.|||+|++++++|||||+++++|||||+|||||++||+|+|
T Consensus 547 ~ii~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~ 623 (796)
T 1l5w_A 547 HILALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIP 623 (796)
T ss_dssp HHHHHHHHHHT-CTTC--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGG
T ss_pred HHHHHHHHHHC-CCCC--CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHH
T ss_conf 89999999850-8877--78994999996277657888999999999998742460149960799978999899999865
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCC---CCCCHH
Q ss_conf 64223457878756788530034415852799514852100001367524211221012888765014899---999948
Q 003693 665 GSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPR 741 (802)
Q Consensus 665 gaDi~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~flFg~~~~ev~~~~~~~~~~~---~~~~~~ 741 (802)
||||||||||||+||||||||||||||+|||||+||||+||.+++|++|||+||.++++|.+++..+ |++ |+.++.
T Consensus 624 gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~-y~a~~~y~~~~~ 702 (796)
T 1l5w_A 624 AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKG-YDPVKWRKKDKV 702 (796)
T ss_dssp GCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHH
T ss_pred HCCEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEEHHHCCCCCCEEEECCCHHHHHHHHHCC-CCHHHHHHCCHH
T ss_conf 2002015899987877657789998698125674775410123058984899559899999999704-377777505999
Q ss_pred HHHHHHHHHCCCCCCCC---HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 99999999829999999---0999999852789998972201577078999999999772059
Q 003693 742 FEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKRS 801 (802)
Q Consensus 742 l~~v~~~m~~~~fs~~~---y~~ly~~l~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~y~d~ 801 (802)
++.+++.+.++.|||.+ |.+||++|+.+ + +|+|+|++||+||++||++|++.|+|+
T Consensus 703 ~~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~-~---~D~~~v~~Df~~y~~~q~~v~~~Y~d~ 761 (796)
T 1l5w_A 703 LDAVLKELESGKYSDGDKHAFDQMLHSIGKQ-G---GDPYLVMADFAAYVEAQKQVDVLYRDQ 761 (796)
T ss_dssp HHHHHHHHHHTTTTTTCTTTTHHHHHHTSTT-T---CCTTCHHHHHHHHHHHHHHHHHHHHSH
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC-C---CCCEEEHHHHHHHHHHHHHHHHHHHCH
T ss_conf 9999999972998988678999999999663-8---983332210899999999999972099
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=1.00 E-value=1 Score=1764.07 Aligned_cols=745 Identities=44% Similarity=0.718 Sum_probs=709.7
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCCCHHHHHHC
Q ss_conf 99789999999999756898999999788999999999999999999985410137995689987011013103678510
Q 003693 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (802)
Q Consensus 27 ~~~~~~k~~i~~~l~~~~g~~~~~a~~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyylS~Efl~gr~L~n~l~n 106 (802)
.++++|+++|.+||++++|+++.+|++.++|.|+|.+|||++.++|.+|++.+... |+||||||||||||+|.|||+|
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~--k~v~Y~S~Efl~gr~L~n~l~n 81 (796)
T 2c4m_A 4 EKQPLPAALVGSHVRAAAGTPADLATDRKFWTGLSRAVQERIADDWERTREAYGAA--RQQHYFSAEFLMGRALLNNLTN 81 (796)
T ss_dssp --CCSCHHHHHHHHHHHHSSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CEEEEECSCCCCBCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CEEEEEEHHHCCHHHHHHHHHH
T ss_conf 22899999999999997499937799999999999999999988999865532257--7189992132150556668875
Q ss_pred CCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEECCCC
Q ss_conf 67089999999962999578883001257899984001553486542169981898625688641278518905320411
Q 003693 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (802)
Q Consensus 107 Lg~~~~~~e~L~~lg~~~~~i~~~E~d~~LgnGGLGrLA~~~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~e~pd~ 186 (802)
||+++++++||+++|+++++|+++|+||+|||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 82 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~ 161 (796)
T 2c4m_A 82 LGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDP 161 (796)
T ss_dssp TTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred CCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCEEEEECCC
T ss_conf 55479999999980999899986455666578708888999999997579986898624158871798258978861776
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCEEEECCCCCEEEECCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 00369985101378058998599478759993455389689999964136888988617899999451887765445696
Q 003693 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (802)
Q Consensus 187 Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~g~~~w~~~~~v~av~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~ 266 (802)
|++.|+|||++|++.+++|+|+|+ +|.|+|||+|||||+++++|+||||++++++ .|+|..|+.
T Consensus 162 wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~a~~~~-~f~l~~fn~ 225 (796)
T 2c4m_A 162 WREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWKAEPWE-EFDYDAFNA 225 (796)
T ss_dssp SSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEEEEESS-SSCHHHHHT
T ss_pred CCCCCCCEEEECCCCEEEEEECCE---------------EEEEEEEECCCCCCCCCCEEEEEEEECCCCC-CCCHHHCCC
T ss_conf 545799604764772789974998---------------9999997246567677735899988605663-246543267
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 11466775344200433301578984001141222545766616999999999714674433589750896179854320
Q 003693 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (802)
Q Consensus 267 ~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk~lRL~Qe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~Hpala 346 (802)
|+|.+|+++++.+|+||++|||+|++++||+|||+||||||+|++|+|+|+|++.++ +|+.|++|++||||||||||+
T Consensus 226 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~l~~l~~p~viHlNDtHpal~ 303 (796)
T 2c4m_A 226 QRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK--DLSNFAEFHSVQLNDTHPVLA 303 (796)
T ss_dssp TCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--CSTTHHHHEEEEEESSTTTTH
T ss_pred CCHHHHHHCHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CHHHCCCCEEEEECCCHHHHH
T ss_conf 656565446275616543376999985409889975999999999999999987088--734459970899389717768
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 89999998974099967887501750898615981134410439999963145799999999999999997479980000
Q 003693 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (802)
Q Consensus 347 i~EllR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~~eglE~~~~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~ 426 (802)
+|||||+++|++|++|++||++|+++|+||||||+|||+|+||+++++++||||++||++||.+|+..+..+ |.|++++
T Consensus 304 i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~~~~~~ 382 (796)
T 2c4m_A 304 IPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAAD-GLDEETI 382 (796)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHC-CCCHHHH
T ss_conf 999999974541798789999860217888568637776417999999875798888707689999999845-7827665
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 01343247999992101130001188316267785999976220591111768865411356743334556933799999
Q 003693 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (802)
Q Consensus 427 ~~l~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~ei~k~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~ 506 (802)
.+++++++ ++||||++||++||+|||||++|++++++++|++|+.++|+||.|||||||+|||+.+|||+++++|+
T Consensus 383 ~~~~i~~~----~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~ 458 (796)
T 2c4m_A 383 NRMAPIQH----GTVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLT 458 (796)
T ss_dssp HHHCSEET----TEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHH
T ss_pred HCCCCEEC----CCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHH
T ss_conf 32541248----81169999998428321023877888613666669872864006561884667750035975889999
Q ss_pred HHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHH
Q ss_conf 75186400038014874200599978999999999999999999999993997899960351054310222322444558
Q 003693 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (802)
Q Consensus 507 ~~~g~~~w~~~~~~l~~l~~~~dd~~~~~~~~~~K~~nK~~L~~~i~~~~g~~idp~~l~d~~vkR~~eYKRq~Lnil~~ 586 (802)
+++|+++|.+|+++|++|.++++|++|+++|+++|++||++|++++++++|+.+||++|||||||||||||||+||+|++
T Consensus 459 ~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~i 538 (796)
T 2c4m_A 459 RLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYV 538 (796)
T ss_dssp HHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHH
T ss_pred HHCCCHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCCCEEHHHH
T ss_conf 86692122118699999886199889999999999999999999999985998799976777764042530568829999
Q ss_pred HHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCC
Q ss_conf 99999987119111169889599998228989988999999999998886189577992169998388966785214564
Q 003693 587 IYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS 666 (802)
Q Consensus 587 i~~~~~i~~~~~~~~~~~~P~q~IfaGKA~P~y~~aK~iIk~I~~~a~~in~dp~v~~~lkVvFl~nY~vslA~~ii~ga 666 (802)
+++|.+|+. +|.. +++|+||||+|||||+|++||.|||+|++++++|||||+++++|||||+|||||++||+|+|||
T Consensus 539 i~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~ga 615 (796)
T 2c4m_A 539 LDLYFRIKE-DGLT--DIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPAS 615 (796)
T ss_dssp HHHHHHHHT-SCCC--SSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGC
T ss_pred HHHHHHHHH-CCCC--CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHC
T ss_conf 999999860-8877--7899499999628776798899999999999874246014996079997999989999986412
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCC---CCCCHHHH
Q ss_conf 223457878756788530034415852799514852100001367524211221012888765014899---99994899
Q 003693 667 ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFE 743 (802)
Q Consensus 667 Di~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~g~~n~flFg~~~~ev~~~~~~~~~~~---~~~~~~l~ 743 (802)
||||||||||+||||||||||||||+|||||+||||+||.+++|++|||+||.+++++..++.. |++ |+.++.++
T Consensus 616 Dv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~--y~a~~~y~~~~~~~ 693 (796)
T 2c4m_A 616 DVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRES--YKPYELYETVPGLK 693 (796)
T ss_dssp SEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHT--CCHHHHHHHSTTHH
T ss_pred CEEECCCCCCCCCCCHHHHHHHHCCCEEEECCCCEEEEHHHHCCCCCEEEECCCHHHHHHHHHH--HCHHHHHHCCHHHH
T ss_conf 2402589998788760778999769747704577686502216977479956845429999973--18487761599899
Q ss_pred HHHHHHHCCCCCCCC---HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCC
Q ss_conf 999999829999999---0999999852789998972201577078999999999772-059
Q 003693 744 EAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAY-KRS 801 (802)
Q Consensus 744 ~v~~~m~~~~fs~~~---y~~ly~~l~~~~~~~~~D~~~~~~Df~~y~~~~~~~~~~y-~d~ 801 (802)
.+++.+.++.|||.+ |.+||++|+..++.+.+|+|||++||+||++||++|+++| +|+
T Consensus 694 ~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~~~~~~~D~~~~~~Df~~y~~~q~~v~~~y~~d~ 755 (796)
T 2c4m_A 694 RALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMAADYASDP 755 (796)
T ss_dssp HHHHTTTSSSSCCTTCCHHHHHHHHHHSCCGGGCSCTTCHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCH
T ss_conf 99999971988998779999999999701467789833203018999999999999998789
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=331.59 Aligned_cols=469 Identities=17% Similarity=0.177 Sum_probs=317.6
Q ss_pred CCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCC
Q ss_conf 99984001553486542169981898625688641278518905320411003699851013780589985994787599
Q 003693 137 GNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPN 216 (802)
Q Consensus 137 gnGGLGrLA~~~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~e~pd~Wl~~~~pwe~~r~~~~~~V~f~g~~~~~~~ 216 (802)
=.||||.-++..-++++.+|.-+.-+-=.|.. +.+.+... ....+.+
T Consensus 24 K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~------~~~~~~~~------------------~~~~~~~--------- 70 (536)
T 3vue_A 24 KTGGLGDVLGGLPPAMAANGHRVMVISPRYDQ------YKDAWDTS------------------VVAEIKV--------- 70 (536)
T ss_dssp CSSHHHHHHHHHHHHHHTTTCEEEEEEECCSC------CTTCEEEE------------------EEEEEEE---------
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH------HHHHCCCC------------------EEEEEEE---------
T ss_conf 26769999999999999769969999048502------22422651------------------6899983---------
Q ss_pred CCEEEECCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf 93455389689999964136888988617899999451887765445696114667753442004333015789840011
Q 003693 217 GTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGK 296 (802)
Q Consensus 217 g~~~w~~~~~v~av~yd~~i~g~~~~~~~~lrlw~a~v~~~~~~l~~~~~~~y~~a~~~~~~~~~It~~LY~~D~~~~Gk 296 (802)
.+. ....++|..... ++++|+++++.|++- ... .-...+|++++.. .-
T Consensus 71 --------------------~~~----~~~~~~~~~~~~--gv~~y~id~~~~~~r----~~~-~~~~~~Y~~~~~~-~~ 118 (536)
T 3vue_A 71 --------------------ADR----YERVRFFHCYKR--GVDRVFIDHPSFLEK----VWG-KTGEKIYGPDTGV-DY 118 (536)
T ss_dssp --------------------TTE----EEEEEEEECEET--TEEEEEEECTTTTCC------------------------
T ss_pred --------------------CCC----EEEEEEEEEEEC--CCEEEEECCHHHHCC----CCC-CCCCCCCCCCCCC-CC
T ss_conf --------------------683----378999999978--955999647554123----346-6778666887567-66
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEE
Q ss_conf 412225457666169999999997146744335-8975089617985432089999998974099967887501750898
Q 003693 297 LLRLKQQFFLCSASLQDMILRFKERKSGRQWSE-FPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAY 375 (802)
Q Consensus 297 ~lRL~Qe~fl~~a~lqdi~r~~~~~~g~~~l~~-l~~~~viHlND~Hpalai~EllR~l~d~~gl~~d~A~~i~~~~~vf 375 (802)
.--..++.||+.|+++.+ +.. ..+....+.. .+.++++||||||++++ |-+++......+ .+ ....++|
T Consensus 119 ~d~~~rf~~f~~a~l~~~-~~l-~~~~~~~~~~~~~~ddIiH~hDW~t~l~-~~~l~~~~~~~~-----~~--~~~~~V~ 188 (536)
T 3vue_A 119 KDNQMRFSLLCQAALEAP-RIL-NLNNNPYFKGTYGEDVVFVCNDWHTGPL-ASYLKNNYQPNG-----IY--RNAKVAF 188 (536)
T ss_dssp CHHHHHHHHHHHHHHHHH-HHC-CCCCCTTCCSCCCSCEEEEEESGGGSTH-HHHHHHHTTTTT-----SS--TTCEEEE
T ss_pred CHHHHHHHHHHHHHHHHH-HHH-CCCCCHHHHCCCCCCEEEEECCCHHHHH-HHHHHHHHHHHH-----HH--CCCCEEE
T ss_conf 417999999999999999-973-0265301101479987999776048999-999998640233-----20--2563454
Q ss_pred EECCCCHHHHHHCCHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCH
Q ss_conf 615981134410439999963-1457999999999999999974799800000134324799999210113000118831
Q 003693 376 TNHTVLPEALEKWSQAVMWKL-LPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTV 454 (802)
Q Consensus 376 T~HT~~~eglE~~~~~l~~~~-lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~vnMa~lai~~S~~v 454 (802)
|+||+.++|. |+...+... ++... ... .+.......... .+.+||...++..|+.|
T Consensus 189 TiHnl~~qg~--~~~~~~~~~~~~~~~----------~~~--------~~~~~~~~~~~~---~~~~n~~k~~i~~ad~v 245 (536)
T 3vue_A 189 CIHNISYQGR--FAFEDYPELNLSERF----------RSS--------FDFIDGYDTPVE---GRKINWMKAGILEADRV 245 (536)
T ss_dssp EESCTTCCCE--EEGGGGGGGCCCGGG----------HHH--------HEEEETTTSTTC---EEEEEHHHHHHHHCSEE
T ss_pred EECCCCCCCC--CCHHHHHHCCCCHHH----------CCH--------HHHHHCCCCCCC---CCCHHHHHHHHHHCCEE
T ss_conf 2157422455--553336441896564----------010--------333311464100---33043999999853677
Q ss_pred HHHHHHHHHHHHHHHHC-CC--CCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCC
Q ss_conf 62677859999762205-91--1117-68865411356743334556933799999751864000380148742005999
Q 003693 455 NGVAQLHSDILKADLFA-DY--VSLW-PNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADN 530 (802)
Q Consensus 455 NgVS~lH~ei~k~~~f~-~~--~~l~-p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~w~~~~~~l~~l~~~~dd 530 (802)
++||+.|++++.+. ++ ++ .... +.++..|.||||...| ||..+..+...+. ..+
T Consensus 246 ~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~----~p~~d~~~~~~~~-----------------~~~ 303 (536)
T 3vue_A 246 LTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEW----DPSKDKYITAKYD-----------------ATT 303 (536)
T ss_dssp EESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTS----CTTTCSSSSCCCC-----------------TTT
T ss_pred EECCHHHHHHHHCC-CCCCCCCCCCCCCCCEEEEECCCCHHHC----CCCCCCCCCCCCC-----------------HHH
T ss_conf 87687885343126-3445220012545781899799664214----8877621001444-----------------345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
Q ss_conf 78999999999999999999999993997899960351054310222322444558999999871191111698895999
Q 003693 531 TELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIM 610 (802)
Q Consensus 531 ~~~~~~~~~~K~~nK~~L~~~i~~~~g~~idp~~l~d~~vkR~~eYKRq~Lnil~~i~~~~~i~~~~~~~~~~~~P~q~I 610 (802)
..+.|..+|..|.. ++|+..|++.++++++.|+.++|+.++ ++.++.++.+ . ..+++
T Consensus 304 ------~~~~K~~~k~~l~~----~~gl~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~l~~--~----------~~~l~ 360 (536)
T 3vue_A 304 ------AIEAKALNKEALQA----EAGLPVDRKIPLIAFIGRLEEQKGPDV-MAAAIPELMQ--E----------DVQIV 360 (536)
T ss_dssp ------HHHHHHHHHHHHHH----HTTSCCCTTSCEEEEECCBSGGGCHHH-HHHHHHHHTT--S----------SCEEE
T ss_pred ------HHHHHHHHHHHHHH----HCCCCCCCCCCEEEEEEECCCCCCHHH-HHHHHHHHHH--H----------CCEEE
T ss_conf ------55656777999998----619987999758999965302378478-9999997685--4----------98599
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCC
Q ss_conf 98228989988999999999998886189577992169998388966785214564223457878756788530034415
Q 003693 611 IGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN 690 (802)
Q Consensus 611 faGKA~P~y~~aK~iIk~I~~~a~~in~dp~v~~~lkVvFl~nY~vslA~~ii~gaDi~l~~s~~~~EASGTs~MKa~lN 690 (802)
+.|.+.+.+.. .+...+..+ ++ +|.|...++....+.++++||++++||+ +|+||++.|-||..
T Consensus 361 l~G~G~~~~~~------~~~~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~ 424 (536)
T 3vue_A 361 LLGTGKKKFEK------LLKSMEEKY------PG--KVRAVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRY 424 (536)
T ss_dssp EECCBCHHHHH------HHHHHHHHS------TT--TEEEECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHT
T ss_pred EEECCCCHHHH------HHHHHHHHC------CC--CEEEEEECCHHHHHHHHHHHHEEECCCC--CCCCCHHHHHHHHC
T ss_conf 99546726899------999987616------88--5499971468889999986234253465--68988899999986
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCEEECCC----------CC-CHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC-
Q ss_conf 85279951485210000136752421122----------10-1288876501489999994899999999829999999-
Q 003693 691 GCLIIGTLDGANVEIRQEIGEENFFLFGA----------VA-EQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD- 758 (802)
Q Consensus 691 Gal~i~tlDGa~vEi~e~~g~~n~flFg~----------~~-~ev~~~~~~~~~~~~~~~~~l~~v~~~m~~~~fs~~~- 758 (802)
|++.|++..|...|+.++ .+|||+|+. .. +++.... +++...++.+.|-++++++|..+ |||..
T Consensus 425 G~PvI~s~~gG~~e~V~d--g~~G~~~~~~~~~g~l~~~~d~~~la~ai-~ral~~~~~~~~~~~~~~am~~~-fSW~~~ 500 (536)
T 3vue_A 425 GTPCACASTGGLVDTVIE--GKTGFHMGRLSVDCKVVEPSDVKKVAATL-KRAIKVVGTPAYEEMVRNCMNQD-LSWKGP 500 (536)
T ss_dssp TCCEEECSCTHHHHHCCB--TTTEEECCCCCSCTTCCCHHHHHHHHHHH-HHHHHHTTSHHHHHHHHHHHHSC-CSSHHH
T ss_pred CCCEEECCCCCCHHEEEC--CCCCCCCCCCCCCEEEECCCCHHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHC-CCHHHH
T ss_conf 998999079982220227--98763246677751587999999999999-99998529599999999987735-999999
Q ss_pred ---HHHHHHHHHH
Q ss_conf ---0999999852
Q 003693 759 ---YNPLLDSLEG 768 (802)
Q Consensus 759 ---y~~ly~~l~~ 768 (802)
|.+||.+|..
T Consensus 501 A~~y~~ly~~L~~ 513 (536)
T 3vue_A 501 AKNWENVLLGLGV 513 (536)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999998604
No 6
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=1.00 E-value=1 Score=194.57 Aligned_cols=361 Identities=13% Similarity=0.099 Sum_probs=228.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEC
Q ss_conf 22254576661699999999971467443358975089617985432089999998974099967887501750898615
Q 003693 299 RLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNH 378 (802)
Q Consensus 299 RL~Qe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~Hpalai~EllR~l~d~~gl~~d~A~~i~~~~~vfT~H 378 (802)
+--.+-||+.+.++.+.. +.. ..|+++|+||||++++ +.++|... ....++||+|
T Consensus 159 d~~~F~y~~~avl~~l~~----------~~~-~~pdIiH~HDW~tg~~-~~~Lk~~~-------------~~i~tVfTiH 213 (725)
T 3nb0_A 159 DAILLGYTVAWFLGEVAH----------LDS-QHAIVAHFHEWLAGVA-LPLCRKRR-------------IDVVTIFTTH 213 (725)
T ss_dssp HHHHHHHHHHHHHHHHHH----------HCC-SEEEEEEEESGGGCTH-HHHHHHTT-------------CSCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHH----------CCC-CCCCEEEECCHHHHHH-HHHHHHHC-------------CCCCEEEEEE
T ss_conf 899999999999999886----------278-9984799473666289-99999757-------------8998999970
Q ss_pred CCC---H---HHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCC
Q ss_conf 981---1---3441043999996314579999999999999999747998000001343247999992101130001188
Q 003693 379 TVL---P---EALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAH 452 (802)
Q Consensus 379 T~~---~---eglE~~~~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~vnMa~lai~~S~ 452 (802)
+.. . +|. ++.. .. +. .++.+++.. .+.+ ...++|.+.+++.|+
T Consensus 214 ~telGR~lagqg~--~~~y--~~-L~-------------------~~~~d~ea~-~~~i------~~~~~~EKaga~~AD 262 (725)
T 3nb0_A 214 ATLLGRYLCASGS--FDFY--NC-LE-------------------SVDVDHEAG-RFGI------YHRYCIERAAAHSAD 262 (725)
T ss_dssp SCHHHHHHTSSSC--SCHH--HH-GG-------------------GCCHHHHHH-HTTC------HHHHHHHHHHHHHSS
T ss_pred CCHHHHHHHHCCC--CCHH--HH-HH-------------------HCCCCHHHH-HHCH------HHHHHHHHHHHHHCC
T ss_conf 1646665652489--7354--43-55-------------------508973444-3110------688899999997489
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHH
Q ss_conf 31626778599997622059111176886541135674333455693379999975186400038014874200599978
Q 003693 453 TVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTE 532 (802)
Q Consensus 453 ~vNgVS~lH~ei~k~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~w~~~~~~l~~l~~~~dd~~ 532 (802)
.+++||+.+++++++ ++ ..-++++ |.|||++..| +|. . .
T Consensus 263 ~ITTVS~~yA~Ei~~-Ll----~r~~d~i--IpNGID~~~f----~p~---------~---------------------~ 301 (725)
T 3nb0_A 263 VFTTVSQITAFEAEH-LL----KRKPDGI--LPNGLNVIKF----QAF---------H---------------------E 301 (725)
T ss_dssp EEEESSHHHHHHHHH-HT----SSCCSEE--CCCCBCCCCC----SST---------T---------------------H
T ss_pred EEEECCHHHHHHHHH-HH----CCCCCEE--ECCCCCCCCC----CCC---------H---------------------H
T ss_conf 999899899999999-96----6999879--7588103545----841---------3---------------------5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC--CCCC-CCCCEEECCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
Q ss_conf 9999999999999999999999939--9789-9960351054310-2223224445589999998711911116988959
Q 003693 533 LQAEWESAKMASKKHLADYIWRVTG--VTID-PNSLFDIQVKRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRT 608 (802)
Q Consensus 533 ~~~~~~~~K~~nK~~L~~~i~~~~g--~~id-p~~l~d~~vkR~~-eYKRq~Lnil~~i~~~~~i~~~~~~~~~~~~P~q 608 (802)
+.+.|..+|.+|+++++.+++ ..++ ++.+++..+.|+. +.|+.+| ++.++.++.+.+..... +.+=+-
T Consensus 302 ----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~~~~~---~~~vva 373 (725)
T 3nb0_A 302 ----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLKVSGS---KKTVVA 373 (725)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHHHTTC---CCEEEE
T ss_pred ----HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHH-HHHHHHHHHHHHHHCCC---CCCEEE
T ss_conf ----6777999999999998763046778897760499999983234488799-99999999998763468---983799
Q ss_pred EEEEECCCCCCH----HHHHHHHHHHHHH---------------------------------------------------
Q ss_conf 999822898998----8999999999998---------------------------------------------------
Q 003693 609 IMIGGKAFATYT----NAKRIVKLVNDVG--------------------------------------------------- 633 (802)
Q Consensus 609 ~IfaGKA~P~y~----~aK~iIk~I~~~a--------------------------------------------------- 633 (802)
||+..-+.-++. .|+.+.|.+.+-.
T Consensus 374 fii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~ 453 (725)
T 3nb0_A 374 FIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALR 453 (725)
T ss_dssp EEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHC
T ss_conf 99937877887666631135899999899999998768899997405344557778989888639677788888877640
Q ss_pred --------------------------HHHCCCCCCCCCCEEEEECCCCHHH-------HHHHCCCCCCCCCCCCCCCCCC
Q ss_conf --------------------------8861895779921699983889667-------8521456422345787875678
Q 003693 634 --------------------------EVVNTDPEVNSYLKVVFVPNYNVSV-------AELLIPGSELSQHISTAGMEAS 680 (802)
Q Consensus 634 --------------------------~~in~dp~v~~~lkVvFl~nY~vsl-------A~~ii~gaDi~l~~s~~~~EAS 680 (802)
+..+-...-.++.||+|+|.|--.. -..++++||++..||+ +|++
T Consensus 454 ~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~Egf 531 (725)
T 3nb0_A 454 RPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPW 531 (725)
T ss_dssp CCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSS
T ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCEEEEECCC--CCCC
T ss_conf 47788997366603557754899999864877776774549993331478886410278999864659996566--5788
Q ss_pred CCCCCHHHCCCCEEEEEECCCCCCCCCCC-----CCCCEEECCCC----CCHHHHHHHHCCCCCC-CCCHHHH--HHHHH
Q ss_conf 85300344158527995148521000013-----67524211221----0128887650148999-9994899--99999
Q 003693 681 GTSNMKFSLNGCLIIGTLDGANVEIRQEI-----GEENFFLFGAV----AEQVPKLRKEREDGLF-KPDPRFE--EAKQF 748 (802)
Q Consensus 681 GTs~MKa~lNGal~i~tlDGa~vEi~e~~-----g~~n~flFg~~----~~ev~~~~~~~~~~~~-~~~~~l~--~v~~~ 748 (802)
|...|-||..|++.|+|..|-..|+..+. +.++|++|-.. .+++.....+ +...+ ..+++.+ +...+
T Consensus 532 Gl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~-aL~~f~~~d~~~r~~mr~~a 610 (725)
T 3nb0_A 532 GYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVD-YMEEFVKKTRRQRINQRNAT 610 (725)
T ss_dssp CHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHH-HHHHHHTCCHHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH-HHHHHHHCCHHHHHHHHHHH
T ss_conf 78999999819988992799706665402345677785699947888998999999999-99998709999999999999
Q ss_pred --HHCCCCCCCC----HHHHHHHHHH
Q ss_conf --9829999999----0999999852
Q 003693 749 --IRSGAFGSYD----YNPLLDSLEG 768 (802)
Q Consensus 749 --m~~~~fs~~~----y~~ly~~l~~ 768 (802)
+.. .|+|.. |.++|+.++.
T Consensus 611 r~~A~-~FSWe~iA~~Yl~~Ye~aL~ 635 (725)
T 3nb0_A 611 EALSD-LLDWKRMGLEYVKARQLALR 635 (725)
T ss_dssp HHGGG-GGBHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HCCHHHHHHHHHHHHHHHHH
T ss_conf 99998-39999999999999999974
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=146.88 Aligned_cols=333 Identities=16% Similarity=0.167 Sum_probs=212.9
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 97508961798543208999999897409996788750175089861598113441043999996314579999999999
Q 003693 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (802)
Q Consensus 331 ~~~~viHlND~Hpalai~EllR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~~eglE~~~~~l~~~~lpr~~~ii~~in~~ 410 (802)
.++++||+|+++++++ +.+++.+ ...+..+++|.|+..+++. ++...+...
T Consensus 129 ~~~DiIh~~~~~~~~~-~~~~~~~------------~~~~~p~v~t~H~~~~~~~--~~~~~~~~~-------------- 179 (485)
T 1rzu_A 129 WRPDMVHAHDWQAAMT-PVYMRYA------------ETPEIPSLLTIHNIAFQGQ--FGANIFSKL-------------- 179 (485)
T ss_dssp CCCSEEEEEHHHHTTH-HHHHHHS------------SSCCCCEEEEESCTTCCCE--ECGGGGGGS--------------
T ss_pred CCCCEEEECCCCHHHH-HHHHHHC------------CCCCCCEEEEECCCCCCCC--CCHHHHHHC--------------
T ss_conf 9998899646305578-9997310------------3589978999667544687--887787343--------------
Q ss_pred HHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHC-CC---CCCCCCCCCCCCC
Q ss_conf 9999997479980000013432479999921011300011883162677859999762205-91---1117688654113
Q 003693 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DY---VSLWPNKLQNKTN 486 (802)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~ei~k~~~f~-~~---~~l~p~k~~~iTN 486 (802)
+.....+ ....... .....+...++..++.+.+||+...+.+++..++ ++ ....+.++.-|-|
T Consensus 180 ---------~~~~~~~-~~~~~~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~n 246 (485)
T 1rzu_A 180 ---------ALPAHAF-GMEGIEY---YNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVN 246 (485)
T ss_dssp ---------CCCGGGS-STTTTEE---TTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCC
T ss_pred ---------CCCHHHC-CCCCCCC---CCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEECC
T ss_conf ---------9980320-2000132---56235999888646779960875899983543576658999860688169708
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 56743334556933799999751864000380148742005999789999999999999999999999939978999603
Q 003693 487 GITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLF 566 (802)
Q Consensus 487 GV~~rrWl~~~Np~l~~li~~~~g~~~w~~~~~~l~~l~~~~dd~~~~~~~~~~K~~nK~~L~~~i~~~~g~~idp~~l~ 566 (802)
||+...| +|..+..+...++ .++ + +.|..+|..+.+ ++|++-++ .+.
T Consensus 247 gvd~~~~----~~~~~~~~~~~~~-----------------~~~------~-~~~~~~~~~~r~----~~~~~~~~-~~~ 293 (485)
T 1rzu_A 247 GIDADVW----NPATDHLIHDNYS-----------------AAN------L-KNRALNKKAVAE----HFRIDDDG-SPL 293 (485)
T ss_dssp CBCTTTS----CTTTCTTSSSCCB-----------------TTB------C-TTHHHHHHHHHH----HHTCCCSS-SCE
T ss_pred CCCCCCC----CCCCCCCCCCCCC-----------------CCC------H-HHHHHHHHHHHH----HCCCCCCC-CEE
T ss_conf 9860205----8866511000124-----------------324------4-567886999999----62988899-839
Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 51054310222322444558999999871191111698895999982289899889999999999988861895779921
Q 003693 567 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 646 (802)
Q Consensus 567 d~~vkR~~eYKRq~Lnil~~i~~~~~i~~~~~~~~~~~~P~q~IfaGKA~P~y~~aK~iIk~I~~~a~~in~dp~v~~~l 646 (802)
++++.|+..+|+.++ ++..+..+.+ . +.++++.|.+.+.+.. .+.+++... ++
T Consensus 294 i~~vGrl~~~Kg~~~-li~a~~~l~~--~----------~~~l~ivG~g~~~~~~------~l~~~~~~~------~~-- 346 (485)
T 1rzu_A 294 FCVISRLTWQKGIDL-MAEAVDEIVS--L----------GGRLVVLGAGDVALEG------ALLAAASRH------HG-- 346 (485)
T ss_dssp EEEESCBSTTTTHHH-HHTTHHHHHH--T----------TCEEEEEECBCHHHHH------HHHHHHHHT------TT--
T ss_pred EEEECCCCCCCCHHH-HHHHHHHHHH--C----------CCEEEEEECCCHHHHH------HHHHHHHHC------CC--
T ss_conf 999725753128799-9999999872--6----------9569999689468999------999999867------88--
Q ss_pred EEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCC-------CCCCEEECCC
Q ss_conf 699983889667852145642234578787567885300344158527995148521000013-------6752421122
Q 003693 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-------GEENFFLFGA 719 (802)
Q Consensus 647 kVvFl~nY~vslA~~ii~gaDi~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~-------g~~n~flFg~ 719 (802)
+|.|+.+|.-.....++++||+...+|+ .|++|..-+-||..|.+.|++..|...|+.++. +.++|++|..
T Consensus 347 ~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~ 424 (485)
T 1rzu_A 347 RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSP 424 (485)
T ss_dssp TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESS
T ss_pred CEEEECCCCHHHHHHHHHCCCEEEECCC--CCCCCHHHHHHHHCCCCEEEECCCCHHHEECCCCCCCCCCCCCCCEEECC
T ss_conf 6899438997999999852999997844--68877799999977997798089983113215653323456776348678
Q ss_pred CC-CHHHHHHHHCCCCCC-CCCHHHHHHHHHHHCCCCCCCC----HHHHHHHHHHC
Q ss_conf 10-128887650148999-9994899999999829999999----09999998527
Q 003693 720 VA-EQVPKLRKEREDGLF-KPDPRFEEAKQFIRSGAFGSYD----YNPLLDSLEGN 769 (802)
Q Consensus 720 ~~-~ev~~~~~~~~~~~~-~~~~~l~~v~~~m~~~~fs~~~----y~~ly~~l~~~ 769 (802)
.. +++..... .....+ +...+.++..++.. ..|||.. |.++|+.++..
T Consensus 425 ~d~~~la~~i~-~ll~~~~~~~~~~~~~~~~~~-~~fs~~~~~~~~~~~y~~~~~~ 478 (485)
T 1rzu_A 425 VTLDGLKQAIR-RTVRYYHDPKLWTQMQKLGMK-SDVSWEKSAGLYAALYSQLISK 478 (485)
T ss_dssp CSHHHHHHHHH-HHHHHHTCHHHHHHHHHHHHT-CCCBHHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHH-HHHHHHCCHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999-999872799999999999998-8689699999999999986379
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=145.69 Aligned_cols=332 Identities=17% Similarity=0.164 Sum_probs=211.8
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 97508961798543208999999897409996788750175089861598113441043999996314579999999999
Q 003693 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (802)
Q Consensus 331 ~~~~viHlND~Hpalai~EllR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~~eglE~~~~~l~~~~lpr~~~ii~~in~~ 410 (802)
.++++||+|+++++++ +-+++. ...+..+++|.|+..+++. ++...+...
T Consensus 128 ~~~Divh~~~~~~~~~-~~~~~~-------------~~~~~p~v~t~H~~~~~~~--~~~~~~~~~-------------- 177 (485)
T 2qzs_A 128 WRPDVVHAHDWHAGLA-PAYLAA-------------RGRPAKSVFTVHNLAYQGM--FYAHHMNDI-------------- 177 (485)
T ss_dssp CCCSEEEEETGGGTTH-HHHHHH-------------TTCSSEEEEEESCTTCCCE--EEGGGGGTT--------------
T ss_pred CCCCEEEEECCCHHHH-HHHHHH-------------CCCCCCEEEEECCCCCCCC--CCHHHHHHC--------------
T ss_conf 8997899606213378-999754-------------3689978999468413578--898888764--------------
Q ss_pred HHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHC-CCCCC---CC--CCCCCC
Q ss_conf 9999997479980000013432479999921011300011883162677859999762205-91111---76--886541
Q 003693 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFA-DYVSL---WP--NKLQNK 484 (802)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~ei~k~~~f~-~~~~l---~p--~k~~~i 484 (802)
+.....+ ....... .....+...++..++.+.+||+...+.++...++ +...+ -+ .++.-|
T Consensus 178 ---------~~~~~~~-~~~~~~~---~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 244 (485)
T 2qzs_A 178 ---------QLPWSFF-NIHGLEF---NGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGV 244 (485)
T ss_dssp ---------TCCGGGC-STTTTEE---TTEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEEC
T ss_pred ---------CCCCHHC-CCCCCCC---CCCCCHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEE
T ss_conf ---------9991321-3111232---46546999998753868856889999985401472468999850667866997
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 13567433345569337999997518640003801487420059997899999999999999999999999399789996
Q 003693 485 TNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNS 564 (802)
Q Consensus 485 TNGV~~rrWl~~~Np~l~~li~~~~g~~~w~~~~~~l~~l~~~~dd~~~~~~~~~~K~~nK~~L~~~i~~~~g~~idp~~ 564 (802)
-|||+...| +|..+..+...++ .++ + +.|..+|..+.+ ++|++-+++.
T Consensus 245 ~ngvd~~~~----~~~~~~~~~~~~~-----------------~~~------~-~~~~~~~~~~r~----~~~~~~~~~~ 292 (485)
T 2qzs_A 245 LNGVDEKIW----SPETDLLLASRYT-----------------RDT------L-EDKAENKRQLQI----AMGLKVDDKV 292 (485)
T ss_dssp CCCCCTTTS----CTTTCTTSSSCCC-----------------TTC------G-GGGHHHHHHHHH----HHTCCCCTTS
T ss_pred ECCCCCCCC----CCCCCCCCCCCCC-----------------CCC------H-HHHHHHHHHHHH----HCCCCCCCCC
T ss_conf 469876645----8644422212366-----------------300------6-577884999998----7198889997
Q ss_pred CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 03510543102223224445589999998711911116988959999822898998899999999999888618957799
Q 003693 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (802)
Q Consensus 565 l~d~~vkR~~eYKRq~Lnil~~i~~~~~i~~~~~~~~~~~~P~q~IfaGKA~P~y~~aK~iIk~I~~~a~~in~dp~v~~ 644 (802)
+.++++.|+..+|+.++ ++..+..+.+ . +.++++.|.+.+.+.. .+.+++... ++
T Consensus 293 ~~i~~vGrl~~~Kg~~~-li~a~~~l~~--~----------~~~l~ivG~g~~~~~~------~l~~~~~~~------~~ 347 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDL-VLEALPGLLE--Q----------GGQLALLGAGDPVLQE------GFLAAAAEY------PG 347 (485)
T ss_dssp CEEEEEEEESGGGCHHH-HHHHHHHHHH--T----------TCEEEEEEEECHHHHH------HHHHHHHHS------TT
T ss_pred EEEEEECCCCCCCCHHH-HHHHHHHHHH--C----------CCEEEEEECCCHHHHH------HHHHHHHHC------CC
T ss_conf 39999666754358799-9999999862--7----------9489999289567899------999999757------99
Q ss_pred CCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCC-------CCCCEEEC
Q ss_conf 21699983889667852145642234578787567885300344158527995148521000013-------67524211
Q 003693 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-------GEENFFLF 717 (802)
Q Consensus 645 ~lkVvFl~nY~vslA~~ii~gaDi~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi~e~~-------g~~n~flF 717 (802)
+|.|+.++.-.....++++||+...+|+ .|++|+.-+-||..|.+.|++..|...|+.++. +.++|++|
T Consensus 348 --~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~ 423 (485)
T 2qzs_A 348 --QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF 423 (485)
T ss_dssp --TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE
T ss_pred --CEEEECCCCHHHHHHHHHHCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCEEEE
T ss_conf --3899478997999999975889997885--678767999999779977987899832552157644344466645997
Q ss_pred CCCC-CHHHHHHHHCCCCCC-CCCHHHHHHHHHHHCCCCCCCC----HHHHHHHHHH
Q ss_conf 2210-128887650148999-9994899999999829999999----0999999852
Q 003693 718 GAVA-EQVPKLRKEREDGLF-KPDPRFEEAKQFIRSGAFGSYD----YNPLLDSLEG 768 (802)
Q Consensus 718 g~~~-~ev~~~~~~~~~~~~-~~~~~l~~v~~~m~~~~fs~~~----y~~ly~~l~~ 768 (802)
.... +++..... .....+ +...+.++..++.. ..|||.. |.++|+.++.
T Consensus 424 ~~~d~~~la~~i~-~ll~~~~~~~~~~~~~~~~~~-~~fs~~~~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 424 EDSNAWSLLRAIR-RAFVLWSRPSLWRFVQRQAMA-MDFSWQVAAKSYRELYYRLKL 478 (485)
T ss_dssp CSSSHHHHHHHHH-HHHHHHTSHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHH
T ss_conf 7899999999999-999870899999999999876-328989999999999998654
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=119.01 Aligned_cols=326 Identities=16% Similarity=0.113 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECC
Q ss_conf 22545766616999999999714674433589750896179854320899999989740999678875017508986159
Q 003693 300 LKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHT 379 (802)
Q Consensus 300 L~Qe~fl~~a~lqdi~r~~~~~~g~~~l~~l~~~~viHlND~Hpalai~EllR~l~d~~gl~~d~A~~i~~~~~vfT~HT 379 (802)
+.+..++..+..+. ++.. ++.-.++++||+|+++++++ +.+++.. .+..+++|.|+
T Consensus 99 ~~~~~~~~~~~~~~-~~~~--------~~~~~~~Dii~~~~~~~~~~-~~~~~~~--------------~~~~~v~~~h~ 154 (439)
T 3fro_A 99 IRKAVTFGRASVLL-LNDL--------LREEPLPDVVHFHDWHTVFA-GALIKKY--------------FKIPAVFTIHR 154 (439)
T ss_dssp HHHHHHHHHHHHHH-HHHH--------TTTSCCCSEEEEESGGGHHH-HHHHHHH--------------HCCCEEEEESC
T ss_pred HHHHHHHHHHHHHH-HHHH--------HCCCCCCEEEEECCHHHHHH-HHHHHHC--------------CCCCEEEEECC
T ss_conf 23257899999999-9997--------44479981999464034345-8988652--------------69978999653
Q ss_pred CCHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHH
Q ss_conf 81134410439999963145799999999999999997479980000013432479999921011300011883162677
Q 003693 380 VLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQ 459 (802)
Q Consensus 380 ~~~eglE~~~~~l~~~~lpr~~~ii~~in~~~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~vnMa~lai~~S~~vNgVS~ 459 (802)
..+.+. +...+... .+..... .....+...++..++.+.+||+
T Consensus 155 ~~~~~~---~~~~~~~~----------------------------~~~~~~~------~~~~~~~~~~~~~ad~ii~~S~ 197 (439)
T 3fro_A 155 LNKSKL---PAFYFHEA----------------------------GLSELAP------YPDIDPEHTGGYIADIVTTVSR 197 (439)
T ss_dssp CCCCCE---EHHHHHHT----------------------------TCGGGCC------SSEECHHHHHHHHCSEEEESCH
T ss_pred CCCCCC---CHHHHCCC----------------------------CCCCCCC------CCEEEHHHHHHHHCCEEEECCH
T ss_conf 444568---56774745----------------------------5100356------6632076665543458872689
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 85999976220591111768865411356743334556933799999751864000380148742005999789999999
Q 003693 460 LHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWES 539 (802)
Q Consensus 460 lH~ei~k~~~f~~~~~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~w~~~~~~l~~l~~~~dd~~~~~~~~~ 539 (802)
...+.... +....+.++.-|-|||+...| +|.. +. .
T Consensus 198 ~~~~~~~~-----~~~~~~~~i~vi~ngvd~~~~----~~~~-------~~------------------~---------- 233 (439)
T 3fro_A 198 GYLIDEWG-----FFRNFEGKITYVFNGIDCSFW----NESY-------LT------------------G---------- 233 (439)
T ss_dssp HHHHHTHH-----HHGGGTTSEEECCCCCCTTTS----CGGG-------SC------------------S----------
T ss_pred HHHHHHHH-----HHHHCCCCEEECCCCCCCHHC----CCCC-------CC------------------C----------
T ss_conf 89999860-----565047734534788880430----8432-------21------------------1----------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 99999999999999993997899960351054310-22232244455899999987119111169889599998228989
Q 003693 540 AKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFAT 618 (802)
Q Consensus 540 ~K~~nK~~L~~~i~~~~g~~idp~~l~d~~vkR~~-eYKRq~Lnil~~i~~~~~i~~~~~~~~~~~~P~q~IfaGKA~P~ 618 (802)
.+...+..+. ++.|+ +++ +.++++.|+. .+|+.++ ++..+.++.. . . ...+.++++.|.+.+.
T Consensus 234 ~~~~~~~~~~----~~~~~--~~~-~~i~~~G~~~~~~Kg~~~-li~a~~~l~~--~-~-----~~~~~~l~i~G~g~~~ 297 (439)
T 3fro_A 234 SRDERKKSLL----SKFGM--DEG-VTFMFIGRFDRGQKGVDV-LLKAIEILSS--K-K-----EFQEMRFIIIGKGDPE 297 (439)
T ss_dssp CHHHHHHHHH----HHHTC--CSC-EEEEEECCSSCTTBCHHH-HHHHHHHHHT--S-G-----GGGGEEEEEECCCCHH
T ss_pred HHHHHHHHHH----HHCCC--CCC-CEEEEECCCCCCCCCHHH-HHHHHHHHHH--C-C-----CCCCEEEEEECCCCHH
T ss_conf 0456699999----97399--998-479997333534366999-9999999985--4-6-----6787189998079726
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC-CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEE
Q ss_conf 98899999999999888618957799216999838-89667852145642234578787567885300344158527995
Q 003693 619 YTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGT 697 (802)
Q Consensus 619 y~~aK~iIk~I~~~a~~in~dp~v~~~lkVvFl~n-Y~vslA~~ii~gaDi~l~~s~~~~EASGTs~MKa~lNGal~i~t 697 (802)
|.. .+.++++.. ++ ++++.+ .+..-...++.+||+...+|+ .|++|++-+-||..|.+.|++
T Consensus 298 ~~~------~l~~~~~~~------~~---~~~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s 360 (439)
T 3fro_A 298 LEG------WARSLEEKH------GN---VKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIAS 360 (439)
T ss_dssp HHH------HHHHHHHHC------TT---EEEECSCCCHHHHHHHHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEE
T ss_pred HHH------HHHHHHHHC------CC---EEEECCCCCHHHHHHHHHHCCEEEECCC--CCCCCHHHHHHHHCCCCEEEC
T ss_conf 778------999987506------98---9997287998899999997799995898--788618999999779976973
Q ss_pred ECCCCCCCCCCCCCCCEEECCCCC-CHHHHHHHHCCCCCCCCCHHHHHHHHHHH--CCCCCCCC----HHHHHHHHHHC
Q ss_conf 148521000013675242112210-12888765014899999948999999998--29999999----09999998527
Q 003693 698 LDGANVEIRQEIGEENFFLFGAVA-EQVPKLRKEREDGLFKPDPRFEEAKQFIR--SGAFGSYD----YNPLLDSLEGN 769 (802)
Q Consensus 698 lDGa~vEi~e~~g~~n~flFg~~~-~ev~~~~~~~~~~~~~~~~~l~~v~~~m~--~~~fs~~~----y~~ly~~l~~~ 769 (802)
..|...|+.+ .++|+++.... +++.....+- ... +.+.+.++..++.. .. |+|.. |.++|++++..
T Consensus 361 ~~~~~~e~~~---~~~g~~~~~~d~~~la~~i~~l-l~~-~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 361 AVGGLRDIIT---NETGILVKAGDPGELANAILKA-LEL-SRSDLSKFRENCKKRAMS-FSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp SSTHHHHHCC---TTTCEEECTTCHHHHHHHHHHH-HHH-TTTTTHHHHHHHHHHHHT-SCHHHHHHHHHHHHHTCSCC
T ss_pred CCCCCCEEEE---CCCEEEECCCCHHHHHHHHHHH-HHC-CHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHH
T ss_conf 7887431687---5844896889989999999999-831-999999999999998764-72999999999999999975
No 10
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=117.67 Aligned_cols=332 Identities=12% Similarity=0.039 Sum_probs=197.1
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEECCCCHHHHHHCCHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 97508961798543208999999897409996788750175089861598113441043999996314579999999999
Q 003693 331 PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKR 410 (802)
Q Consensus 331 ~~~~viHlND~Hpalai~EllR~l~d~~gl~~d~A~~i~~~~~vfT~HT~~~eglE~~~~~l~~~~lpr~~~ii~~in~~ 410 (802)
.+|++||.|.+.++++. -++... ....+++|.|++.+......+. .... ++..
T Consensus 406 ~~PDVIHsH~~~sglva-~llar~--------------~gvP~V~T~Hsl~~~k~~~~~~-~~~~-----------~~~~ 458 (816)
T 3s28_A 406 GKPDLIIGNYSDGNLVA-SLLAHK--------------LGVTQCTIAHALEKTKYPDSDI-YWKK-----------LDDK 458 (816)
T ss_dssp SCCSEEEEEHHHHHHHH-HHHHHH--------------HTCCEEEECSCCHHHHSTTTTT-THHH-----------HHHH
T ss_pred CCCEEEEECCCHHHHHH-HHHHHH--------------CCCCEEEEEECCCCCCCCCCCC-HHHH-----------HHHH
T ss_conf 99739996885389999-999997--------------5998899981663001222330-1556-----------7788
Q ss_pred HHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCC----------------
Q ss_conf 9999997479980000013432479999921011300011883162677859999762205911----------------
Q 003693 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYV---------------- 474 (802)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~vnMa~lai~~S~~vNgVS~lH~ei~k~~~f~~~~---------------- 474 (802)
+ .... ++..-..++..++.|.++|+...+.+++ .++.+.
T Consensus 459 y----------------~~~~--------r~~aE~~~l~~AD~VIa~S~~~~~~l~~-~~~~y~~~~~~~~p~Lyr~~~g 513 (816)
T 3s28_A 459 Y----------------HFSC--------QFTADIFAMNHTDFIITSTFQEIAGSKE-TVGQYESHTAFTLPGLYRVVHG 513 (816)
T ss_dssp H----------------CHHH--------HHHHHHHHHHHSSEEEESCHHHHHCCSS-SCCTTGGGSSEEETTTEEEEES
T ss_pred H----------------HHHH--------HHHHHHHHHHHCCEEEECCHHHHHHHHH-HHHHHHHHHCCCCCHHHHCCCC
T ss_conf 8----------------8988--------8889999998499999888999999998-8877644201354112210122
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -1176886541135674333455693379999975186400038014874200599978999999999999999999999
Q 003693 475 -SLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIW 553 (802)
Q Consensus 475 -~l~p~k~~~iTNGV~~rrWl~~~Np~l~~li~~~~g~~~w~~~~~~l~~l~~~~dd~~~~~~~~~~K~~nK~~L~~~i~ 553 (802)
+.++.|+.-|-|||+..++. |....- .. +.. +.... +....++.. .+
T Consensus 514 I~~~~~ki~VIpnGVD~~~F~----P~~~~~--------~R------l~~---------~~~~i-~~~l~~p~~----~r 561 (816)
T 3s28_A 514 IDVFDPKFNIVSPGADMSIYF----PYTEEK--------RR------LTK---------FHSEI-EELLYSDVE----NK 561 (816)
T ss_dssp CCTTCTTEEECCCCCCTTTSC----CTTCTT--------TC------CGG---------GHHHH-HHHHHCSCC----BT
T ss_pred CCCCCCCEEEECCCCCHHHCC----CCCHHH--------HH------HHH---------CCCCC-CCCCCCHHH----HH
T ss_conf 446778879988974788728----631035--------54------320---------02320-001246056----77
Q ss_pred HHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCC---CCHHHHHHHHHHH
Q ss_conf 9939978999603510543102223224445589999998711911116988959999822898---9988999999999
Q 003693 554 RVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA---TYTNAKRIVKLVN 630 (802)
Q Consensus 554 ~~~g~~idp~~l~d~~vkR~~eYKRq~Lnil~~i~~~~~i~~~~~~~~~~~~P~q~IfaGKA~P---~y~~aK~iIk~I~ 630 (802)
+..|+..+++.+.++++.|+..+|+.++ ++..+.++.+.. | ++.+++.|.+.+ .+...+.....+.
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~---~-------~v~LvIvG~g~~~~~~~~e~~~~~~~L~ 630 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR---E-------LANLVVVGGDRRKESKDNEEKAEMKKMY 630 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH---H-------HCEEEEECCCTTSCCCCHHHHHHHHHHH
T ss_pred HHHCCCCCCCCEEEEEECCCCCCCCHHH-HHHHHHHHHHHC---C-------CEEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 7744457899839999744722179999-999999978557---9-------9699999688753334335699999999
Q ss_pred HHHHHHCCCCCCCCCCEEEEECCC-----CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCC
Q ss_conf 998886189577992169998388-----966785214564223457878756788530034415852799514852100
Q 003693 631 DVGEVVNTDPEVNSYLKVVFVPNY-----NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (802)
Q Consensus 631 ~~a~~in~dp~v~~~lkVvFl~nY-----~vslA~~ii~gaDi~l~~s~~~~EASGTs~MKa~lNGal~i~tlDGa~vEi 705 (802)
.+++.. .+.+ +|.|+.-- +..+.+.+..++|++.+||+ +|++|+.-+-||..|.+.|+|..|...|+
T Consensus 631 ~li~~l----gL~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~Ei 702 (816)
T 3s28_A 631 DLIEEY----KLNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEI 702 (816)
T ss_dssp HHHHHT----TCBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHH
T ss_pred HHHHHC----CCCC--CEEECCCCCCCCCHHHHHHHHHHCCEEEEECCC--CCCCCHHHHHHHHCCCCEEEECCCCHHHH
T ss_conf 999974----9987--289816755668999999999956909998887--55764999999980999999689876999
Q ss_pred CCCCCCCCEEECCCCC-CHHHHHHHHCCCC-CC-CCCHHHHHHHHHHHC--CCCCCCC----HHHHHHHHHH
Q ss_conf 0013675242112210-1288876501489-99-999489999999982--9999999----0999999852
Q 003693 706 RQEIGEENFFLFGAVA-EQVPKLRKEREDG-LF-KPDPRFEEAKQFIRS--GAFGSYD----YNPLLDSLEG 768 (802)
Q Consensus 706 ~e~~g~~n~flFg~~~-~ev~~~~~~~~~~-~~-~~~~~l~~v~~~m~~--~~fs~~~----y~~ly~~l~~ 768 (802)
.+. .++|++|.... +++.....+ ... .. +...+.++..++... ..|||.. |..+|+.+-.
T Consensus 703 V~d--g~~Gllv~p~D~e~LA~aI~~-lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g~ 771 (816)
T 3s28_A 703 IVH--GKSGFHIDPYHGDQAADTLAD-FFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGF 771 (816)
T ss_dssp CCB--TTTBEEECTTSHHHHHHHHHH-HHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHH
T ss_pred HCC--CCCEEEECCCCHHHHHHHHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 706--981899689999999999999-998752699999999999999999868999999999999999767
Done!