BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003695
(802 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 130 IYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYD 189
+YLGS A R +L GIT +LN V CP +F+G YK + ++D+ DI+S +
Sbjct: 11 LYLGSAYHAARRDMLDALGITALLN-VSSDCPNHFEGHYQYKCIPVEDNHKADISSWFME 69
Query: 190 VFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGVTNPNM 249
+Y + V++ GRV VH G+SRS ++ +AYLM ++ E+AF++VK R + +PN
Sbjct: 70 AIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNF 129
Query: 250 GFACQLLLCQKRVHA 264
F QLL + +V A
Sbjct: 130 SFMGQLLQFESQVLA 144
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 130 IYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYD 189
+ LGS A + L++N +TH+LN V + F D YK++ + D P +I S +
Sbjct: 11 LLLGSQDAAHDLDTLKKNKVTHILN-VAYGVENAFLSDFTYKSISILDLPETNILSYFPE 69
Query: 190 VFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGVTNPNM 249
F++ E+ + + G V VH GVSR+ ++VI +LM E SF AF VK AR PN
Sbjct: 70 CFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNS 129
Query: 250 GFACQLLLCQK 260
GF QL Q+
Sbjct: 130 GFMEQLRTYQE 140
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 125 RIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDIT 184
I +YLGS A L IT +LN V E L YK + ++DS + DI+
Sbjct: 8 EILPFLYLGSAYHASKCEFLANLHITALLN-VSRRTSEACMTHLHYKWIPVEDSHTADIS 66
Query: 185 SILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGV 244
S + D+ + VRE+GG+V VH G+SRS ++ +AYLM + ++AF Y+K R +
Sbjct: 67 SHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSM 126
Query: 245 TNPNMGFACQLLLCQKRVHAMPASPN 270
+PN GF QLL Q +P++PN
Sbjct: 127 VSPNFGFMGQLL--QYESEILPSTPN 150
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
Query: 126 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITS 185
I +++LGS + + + L+ GIT VLN V CP +F+G YK++ ++D+ +I++
Sbjct: 7 ILPYLFLGSCSHSSDLQGLQACGITAVLN-VSASCPNHFEGLFRYKSIPVEDNQMVEISA 65
Query: 186 ILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGVT 245
+ + + V+ GGRV VH G+SRS ++ +AYLM ++AF +VK RGV
Sbjct: 66 WFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVI 125
Query: 246 NPNMGFACQLLLCQKRV 262
+PN F QLL + +V
Sbjct: 126 SPNFSFMGQLLQFETQV 142
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 130 IYLGSDAVAKNRGILRQNGITHVLNCVGFV---CPEYFKG-DLVYKTLWLQDSPSEDITS 185
+YLG +A NR LR+ GITHVLN PE ++G + Y + DSP+ D++
Sbjct: 9 LYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSI 68
Query: 186 ILYDVFDYFEDVREQ-GGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGV 244
D+ Q GG++ VHC GVSRS +LV+AYLM + +A + VK RG+
Sbjct: 69 HFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGI 128
Query: 245 TNPNMGFACQLLLCQKRV 262
PN GF QLL +R+
Sbjct: 129 I-PNRGFLRQLLALDRRL 145
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 124 SRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDI 183
++I +H++LGS+ A N L+ G+ ++LN + +F G Y + + D + D+
Sbjct: 5 TQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREI-DNFFPGVFEYHNIRVYDEEATDL 63
Query: 184 TSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARG 243
+ D + + ++ G + VH GVSRS S VIAY M G + + A+ YVK R
Sbjct: 64 LAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRT 123
Query: 244 VTNPNMGFACQL 255
VT PN F QL
Sbjct: 124 VTKPNPSFMRQL 135
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 124 SRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDI 183
S+I +Y+ + A N+ +L N IT V+N V ++ D+ Y + + DSP+ +
Sbjct: 21 SQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVNTLYE-DIQYMQVPVADSPNSRL 79
Query: 184 TSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARG 243
+ D+ V + GR +HC GVSRS +L +AYLM S DA + K+ R
Sbjct: 80 CDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRP 139
Query: 244 VTNPNMGFACQLL-----LCQKRVHAMPASPNSML 273
+ PN GF QL+ L K M +SP M+
Sbjct: 140 IIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGMI 174
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 80.1 bits (196), Expect = 4e-15, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 10/143 (6%)
Query: 121 KECSRIADHIYLG--SDAVAKNRGILRQNGITHVLNCV------GFVCPEYFKGDLVYKT 172
+E I ++LG S A+ +L+++GITH++ C+ F+ P F+ Y
Sbjct: 4 REMQEILPGLFLGPYSSAMKSKLPVLQKHGITHII-CIRQNIEANFIKPN-FQQLFRYLV 61
Query: 173 LWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFE 232
L + D+P E+I ++ + + GG+V VH G+SRS + VIAY+M G +
Sbjct: 62 LDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYR 121
Query: 233 DAFQYVKAARGVTNPNMGFACQL 255
DAF YV+ R NPN GF QL
Sbjct: 122 DAFAYVQERRFCINPNAGFVHQL 144
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 130 IYLGSDAVAKNRGILRQNGITHVLNCVGFV---CPEYFKG-DLVYKTLWLQDSPSEDITS 185
+YLG +A NR LR+ GITHVLN PE ++G + Y + DSP+ D++
Sbjct: 10 LYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSI 69
Query: 186 ILYDVFDYFEDVREQ-GGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGV 244
D+ Q GG++ VH GVSRS +LV+AYLM + +A + VK RG+
Sbjct: 70 HFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGI 129
Query: 245 TNPNMGFACQLLLCQKRV 262
PN GF QLL +R+
Sbjct: 130 I-PNRGFLRQLLALDRRL 146
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 124 SRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDI 183
++I ++LG +VA NR +L+ GIT ++N P + Y + L D P I
Sbjct: 27 AQITSSLFLGRGSVASNRHLLQARGITCIVNAT-IEIPNFNWPQFEYVKVPLADMPHAPI 85
Query: 184 TSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARG 243
V D V + G VHC GVSRS +L IAYLM +A+ +VKA R
Sbjct: 86 GLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRP 145
Query: 244 VTNPNMGFACQLL 256
V PN+GF QL+
Sbjct: 146 VIRPNVGFWRQLI 158
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
Query: 124 SRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDI 183
++I +Y+G+ A++ L +N +TH+L+ P +G + Y + DSPS+++
Sbjct: 8 NKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARP-MLEG-VKYLCIPAADSPSQNL 65
Query: 184 TSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARG 243
T + + + R +G VHC GVSRS +LVIAY+M +EDA V+A R
Sbjct: 66 TRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRS 125
Query: 244 VTNPNMGFACQL 255
NPN+GF QL
Sbjct: 126 CANPNVGFQRQL 137
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 3/134 (2%)
Query: 125 RIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFK--GDLVYKTLWLQDSPSED 182
+I ++YLGS + N L + GI ++LN + P +F+ GD YK + + D S++
Sbjct: 5 QILPNLYLGSARDSANLESLAKLGIRYILNVTPNL-PNFFEKNGDFHYKQIPISDHWSQN 63
Query: 183 ITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
++ + ++ ++ Q V VHC GVSRS ++ +AYLM + S DA+ VK +
Sbjct: 64 LSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKK 123
Query: 243 GVTNPNMGFACQLL 256
+PN F QLL
Sbjct: 124 SNISPNFNFMGQLL 137
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 124 SRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDI 183
+++ +YLG+ AK+ L +N ITH+++ P+ D+ Y + + D+P I
Sbjct: 9 TKVLPGLYLGNFIDAKDLDQLGRNKITHIISI--HESPQPLLQDITYLRIPVADTPEVPI 66
Query: 184 TSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARG 243
+ ++ R GG VH G+SRST++V AY+M G + D + +KA R
Sbjct: 67 KKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRP 126
Query: 244 VTNPNMGFACQL 255
+ NPN GF QL
Sbjct: 127 IANPNPGFRQQL 138
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 123 CSRIADHIYLGSDAVAKNRGILRQNGITHVLNC--------VGFVCPEYFKGDLVYKTLW 174
C+ + IY+G+ +VA++ L++ GITHVLN V Y + Y +
Sbjct: 29 CNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 88
Query: 175 LQDSPSEDITSILYDVFDYFED-VREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFED 233
D+ ++++ D+ + + ++ GRV VHC +G SRS +LVIAYLM R+ +
Sbjct: 89 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKS 148
Query: 234 AFQYVKAARGVTNPNMGFACQLLLCQ 259
A V+ R + PN GF Q LCQ
Sbjct: 149 ALSIVRQNREI-GPNDGFLAQ--LCQ 171
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 123 CSRIADHIYLGSDAVAKNRGILRQNGITHVLNC--------VGFVCPEYFKGDLVYKTLW 174
C+ + IY+G+ +VA++ L++ GITHVLN V Y + Y +
Sbjct: 28 CNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 87
Query: 175 LQDSPSEDITSILYDVFDYFED-VREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFED 233
D+ ++++ D+ + + ++ GRV VHC +G SRS +LVIAYLM R+ +
Sbjct: 88 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKS 147
Query: 234 AFQYVKAARGVTNPNMGFACQLLLCQ 259
A V+ R + PN GF Q LCQ
Sbjct: 148 ALSIVRQNREI-GPNDGFLAQ--LCQ 170
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 125 RIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFK--GDLVYKTLWLQDSPSED 182
+I ++YLGS + N L + GI ++LN + P +F+ GD YK + + D S++
Sbjct: 8 QILPNLYLGSARDSANLESLAKLGIRYILNVTPNL-PNFFEKNGDFHYKQIPISDHWSQN 66
Query: 183 ITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
++ + ++ ++ Q V VH GVSRS ++ +AYLM + S DA+ VK +
Sbjct: 67 LSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKK 126
Query: 243 GVTNPNMGFACQLL 256
+PN F QLL
Sbjct: 127 SNISPNFNFMGQLL 140
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 130 IYLGSDAVAKNRGILRQNGITHVLNCVGF-----VCPEYFKG-DLVYKTLWLQDSPSEDI 183
+Y+G +A A +R L++ G THVLN P+Y++ D+ Y + D P+ D+
Sbjct: 61 LYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDLPTFDL 120
Query: 184 TSILYDVFDYFED-VREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
+ Y + + + + ++ VHC G SRS +LV+AYLM + + DA Q V R
Sbjct: 121 SVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNR 180
Query: 243 GVTNPNMGFACQLLLCQKRV 262
V PN GF QL K++
Sbjct: 181 CVL-PNRGFLKQLRELDKQL 199
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 130 IYLGSDAVAKNRGILRQNGITHVLNCVGF-----VCPEYFKG-DLVYKTLWLQDSPSEDI 183
++LG A+++ L Q GITHV+N ++++G L Y + D+P D+
Sbjct: 53 LFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDL 112
Query: 184 TSILYDVFDYFED-VREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
+ V Y + GRV VHC GVSRS +LV+A+LM E + +A Q V+A R
Sbjct: 113 SVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAHR 172
Query: 243 GVTNPNMGFACQLLLCQKRV 262
+ PN GF QL + R+
Sbjct: 173 NIC-PNSGFLRQLQVLDNRL 191
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 130 IYLGSDAVAKNRGILRQNGITHVLNCVGF-----VCPEYFKG-DLVYKTLWLQDSPSEDI 183
++LG A+++ L Q GITHV+N ++++G L Y + D+P D+
Sbjct: 53 LFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADDNPFFDL 112
Query: 184 TSILYDVFDYFED-VREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
+ V Y + GRV VHC GVSRS +LV+A+LM E + +A Q V+A R
Sbjct: 113 SVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAHR 172
Query: 243 GVTNPNMGFACQLLLCQKRV 262
+ PN GF QL + R+
Sbjct: 173 NIC-PNSGFLRQLQVLDNRL 191
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 123 CSRIADHIYLGSDAVAKNRGILRQNGITHVLNC--------VGFVCPEYFKGDLVYKTLW 174
C+ + IY+G+ +VA++ L++ GITHVLN V Y + Y +
Sbjct: 29 CNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 88
Query: 175 LQDSPSEDITSILYDVFDYFED-VREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFED 233
D+ ++++ D+ + + ++ GRV VH +G SRS +LVIAYLM R+ +
Sbjct: 89 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKS 148
Query: 234 AFQYVKAARGVTNPNMGFACQLLLCQ 259
A V+ R + PN GF Q LCQ
Sbjct: 149 ALSIVRQNREI-GPNDGFLAQ--LCQ 171
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 125 RIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFK--GDLVYKTLWLQDSPSED 182
I +YLG + N +L + GI ++LN + P F+ G+ YK + + D S++
Sbjct: 6 EILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPNL-PNLFENAGEFKYKQIPISDHWSQN 64
Query: 183 ITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
++ + + ++ R + V VH G+SRS ++ +AYLM + S DA+ VK +
Sbjct: 65 LSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKK 124
Query: 243 GVTNPNMGFACQLL 256
+PN F QLL
Sbjct: 125 SNISPNFNFMGQLL 138
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Query: 120 DKECSRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFV-CPEYFKGDLVYKTLWLQDS 178
+ E + I ++LG++ A++ +++ I +V+N + Y KG YK L DS
Sbjct: 5 NAELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDS 64
Query: 179 PSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYV 238
+++ + F++ E+ + G + +HC GVSRS ++VIAYLM + DA+++V
Sbjct: 65 NKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFV 124
Query: 239 KAARGVTNPNMGFACQLL 256
K R + +PN+ F QLL
Sbjct: 125 KGKRPIISPNLNFMGQLL 142
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 122 ECSRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFV-CPEYFKGDLVYKTLWLQDSPS 180
E + I ++LG++ A++ +++ I +V+N + Y KG YK L DS
Sbjct: 3 ELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK 62
Query: 181 EDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKA 240
+++ + F++ E+ + G + +HC GVSRS ++VIAYLM + DA+++VK
Sbjct: 63 QNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKG 122
Query: 241 ARGVTNPNMGFACQLL 256
R + +PN+ F QLL
Sbjct: 123 KRPIISPNLNFMGQLL 138
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 124 SRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDI 183
+R+A +++G+ A +L + GIT +N V P + + + D P+ED+
Sbjct: 13 ARVAPALFIGNARAAGATELLVRAGITLCVN-VSRQQPGPRAPGVAELRVPVFDDPAEDL 71
Query: 184 TSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARG 243
+ L E GG V+C G SRS ++ AYLM G S + AFQ VK+AR
Sbjct: 72 LTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARP 131
Query: 244 VTNPNMGFACQLLLCQKRVHAMPASP 269
V PN+GF QL ++ + A P
Sbjct: 132 VAEPNLGFWAQLQKYEQTLQAQAILP 157
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 124 SRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKG-------DLVYKT-LWL 175
++I +I+LGS A N + N I+ +L VG P FK D+V + L
Sbjct: 11 TQIIQYIHLGSFLNAHNVDYIHNNNISSIL-LVGIEVPSLFKDQCDILRLDIVSEEGHQL 69
Query: 176 QDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAF 235
DS I I+ + R++G V + GV+++ ++VIA+LM+ + SF +AF
Sbjct: 70 YDSIPNAIKFIIRSI------QRKEG--VLIISGTGVNKAPAIVIAFLMYYQRLSFINAF 121
Query: 236 QYVKAARGVTNPNMGFACQLLLCQKRVHAM 265
V+ + + GF QL L +K++ M
Sbjct: 122 NKVQGLYPLIDIESGFILQLKLFEKKLEKM 151
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 203 RVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGVTNPNMGFACQLL 256
++ +HC G+SRS +L+IAY+M S ++ +K+ NP++G QL+
Sbjct: 119 KILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLM 172
>pdb|2FGH|A Chain A, Atp Bound Gelsolin
pdb|2FGH|B Chain B, Atp Bound Gelsolin
Length = 731
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 297 PVAQGFDTRGAFIVLVPSAIYVWIGKNCSVMMSNRAREAANQVIRYEKAQGQITSIKEGE 356
P A ++ AF++ PSA Y+W+G S + A +++R +A Q + EG
Sbjct: 532 PKAGALNSNDAFVLKTPSAAYLWVGAGA----SEAEKTGAQELLRVLRA--QPVQVAEGS 585
Query: 357 EPLEFWDAL 365
EP FW+AL
Sbjct: 586 EPDSFWEAL 594
>pdb|1D0N|A Chain A, The Crystal Structure Of Calcium-Free Equine Plasma
Gelsolin.
pdb|1D0N|B Chain B, The Crystal Structure Of Calcium-Free Equine Plasma
Gelsolin
Length = 729
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 297 PVAQGFDTRGAFIVLVPSAIYVWIGKNCSVMMSNRAREAANQVIRYEKAQGQITSIKEGE 356
P A ++ AF++ PSA Y+W+G S + A +++R +A Q + EG
Sbjct: 530 PKAGALNSNDAFVLKTPSAAYLWVGAGA----SEAEKTGAQELLRVLRA--QPVQVAEGS 583
Query: 357 EPLEFWDAL 365
EP FW+AL
Sbjct: 584 EPDSFWEAL 592
>pdb|3FFN|A Chain A, Crystal Structure Of Calcium-Free Human Gelsolin
pdb|3FFN|B Chain B, Crystal Structure Of Calcium-Free Human Gelsolin
Length = 782
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 297 PVAQGFDTRGAFIVLVPSAIYVWIGKNCSVMMSNRAREAANQVIRYEKAQGQITSIKEGE 356
P A ++ AF++ PSA Y+W+G S + A +++R +A Q + EG
Sbjct: 583 PKAGALNSNDAFVLKTPSAAYLWVGTGA----SEAEKTGAQELLRVLRA--QPVQVAEGS 636
Query: 357 EPLEFWDAL 365
EP FW+AL
Sbjct: 637 EPDGFWEAL 645
>pdb|1P8X|A Chain A, The Calcium-activated C-terminal Half Of Gelsolin
pdb|1P8X|B Chain B, The Calcium-activated C-terminal Half Of Gelsolin
pdb|1P8X|C Chain C, The Calcium-activated C-terminal Half Of Gelsolin
pdb|2FH1|A Chain A, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH1|B Chain B, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH1|C Chain C, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH2|A Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH2|B Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH2|C Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH3|A Chain A, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH3|B Chain B, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH3|C Chain C, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH4|A Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
pdb|2FH4|B Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
pdb|2FH4|C Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
Length = 344
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 297 PVAQGFDTRGAFIVLVPSAIYVWIGKNCSVMMSNRAREAANQVIRYEKAQGQITSIKEGE 356
P A ++ AF++ PSA Y+W+G S + A +++R +A Q + EG
Sbjct: 145 PKAGALNSNDAFVLKTPSAAYLWVGTGA----SEAEKTGAQELLRVLRA--QPVQVAEGS 198
Query: 357 EPLEFWDAL 365
EP FW+AL
Sbjct: 199 EPDGFWEAL 207
>pdb|1H1V|G Chain G, Gelsolin G4-G6ACTIN COMPLEX
Length = 331
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 297 PVAQGFDTRGAFIVLVPSAIYVWIGKNCSVMMSNRAREAANQVIRYEKAQGQITSIKEGE 356
P A ++ AF++ PSA Y+W+G S + A +++R +A Q + EG
Sbjct: 145 PKAGALNSNDAFVLKTPSAAYLWVGTGA----SEAEKTGAQELLRVLRA--QPVQVAEGS 198
Query: 357 EPLEFWDAL 365
EP FW+AL
Sbjct: 199 EPDGFWEAL 207
>pdb|1NPH|A Chain A, Gelsolin Domains 4-6 In Active, Actin Free Conformation
Identifies Sites Of Regulatory Calcium Ions
Length = 329
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 297 PVAQGFDTRGAFIVLVPSAIYVWIGKNCSVMMSNRAREAANQVIRYEKAQGQITSIKEGE 356
P + ++ AF++ PSA Y+W+G S A+E +V+R + Q ++EG
Sbjct: 143 PKSGALNSNDAFVLKTPSAAYLWVGAGASEAEKTAAQELL-KVLRSQHVQ-----VEEGS 196
Query: 357 EPLEFWDAL 365
EP FW+AL
Sbjct: 197 EPDGFWEAL 205
>pdb|3FG7|A Chain A, The Crystal Structure Of Villin Domain 6
pdb|3FG7|B Chain B, The Crystal Structure Of Villin Domain 6
Length = 398
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 16/117 (13%)
Query: 299 AQGFDTRGAFIVLVPSAIYVWIGKNCSVMMSNRAREAANQVIRYEKAQGQITSIKEGEEP 358
A ++ F++ S Y+W GK CS A+ A+ + R EK + EG+EP
Sbjct: 201 ANFLNSNDVFVLKTQSCCYLWCGKGCSGDEREMAKMVADTISRTEKQ-----VVVEGQEP 255
Query: 359 LEFWDALVRGQFFADGCNKEEVKNEQVS-----FSGSNKIATLMQDGAGEIDEYDLD 410
FW AL +A N + ++ E + F SNK + A EI +++ D
Sbjct: 256 ANFWMALGGKAPYA---NTKRLQEENLVITPRLFECSNKTGRFL---ATEIPDFNQD 306
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 175 LQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQS---- 230
L D + DI+ DV + ++ V VH GV+RS ++++AYLM + +S
Sbjct: 82 LVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPML 141
Query: 231 -FEDAFQYVKAARGVTNPNMGFACQLL 256
F + ++ RG N F Q++
Sbjct: 142 YFLYVYHSMRDLRGAFVENPSFKRQII 168
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 38.9 bits (89), Expect = 0.012, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 175 LQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDA 234
L D + DI+ DV + ++ V VHC GV+RS + ++AYL + +S
Sbjct: 99 LVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYLXSKNKESLPXL 158
Query: 235 -FQYV----KAARGVTNPNMGFACQLL 256
F YV + RG N F Q++
Sbjct: 159 YFLYVYHSXRDLRGAFVENPSFKRQII 185
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 38.9 bits (89), Expect = 0.012, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 203 RVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGVTNPNMGFACQLL 256
++ +H G+SRS +L+IAY+M S ++ +K+ NP++G QL+
Sbjct: 119 KILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLM 172
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 163 YFKGDLVYKTLWL--QDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVI 220
+ + L+YK + + Q P E I D F + + G V VHC G++R+ +V
Sbjct: 74 FLRAGLLYKKIQVPGQTLPPESIVQEFIDTVKEFTE-KCPGMLVGVHCTHGINRTGYMVC 132
Query: 221 AYLMWREGQSFEDAFQYVKAARG 243
YLM G + ++A + ARG
Sbjct: 133 RYLMHTLGIAPQEAIDRFEKARG 155
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 203 RVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGVTNPNMGFACQLL 256
++ +H G+SRS +L+IAY+M S ++ +K+ NP++G QL+
Sbjct: 119 KILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLM 172
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 124 SRIADHIYLGSDAVAKNRGILRQNGITHVLNCV--GFVCPEYFKGDLVYKTLWLQDSPSE 181
+R+ +++YLG+ A N + +VLN + P ++ + L D +
Sbjct: 29 TRVTNNVYLGNYKNAXN-APSSEVKFKYVLNLTXDKYTLP---NSNINIIHIPLVDDTTT 84
Query: 182 DITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQS-----FEDAFQ 236
DI+ DV + ++ V VHC GV+RS + ++AYL + +S F +
Sbjct: 85 DISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYLXSKNKESSPXLYFLYVYH 144
Query: 237 YVKAARGVTNPNMGFACQLL 256
+ RG N F Q++
Sbjct: 145 SXRDLRGAFVENPSFKRQII 164
>pdb|1J72|A Chain A, Crystal Structure Of Mutant Macrophage Capping Protein
(Cap G) With Actin-Severing Activity In The Ca2+-Free
Form
Length = 347
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 269 PNSML--RIYRIAPHSSYDPLHLVPKLLNYPVAQGFDTRGAFIVLVPSAIYVWIGKNCSV 326
PN ++ R+Y++ + + + LN+ F+T FI+ + I+ W G ++
Sbjct: 130 PNEVVVQRLYQVKGKKN---IRATERALNW---DSFNTGDCFILDLGQNIFAWCGGKSNI 183
Query: 327 MMSNRAREAANQVIRYEKAQG--QITSIKEGEEPLEFWDAL 365
+ N+AR+ A IR + QG Q+ + +GEEP E L
Sbjct: 184 LERNKARDLA-LAIRDSERQGKAQVEIVTDGEEPAEMIQVL 223
>pdb|1JHW|A Chain A, Ca2+-Binding Mimicry In The Crystal Structure Of The
Eu3+-Bound Mutant Human Macrophage Capping Protein Cap G
Length = 347
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 302 FDTRGAFIVLVPSAIYVWIGKNCSVMMSNRAREAANQVIRYEKAQG--QITSIKEGEEPL 359
F+T FI+ + I+ W G +++ N+AR+ A IR + QG Q+ + +GEEP
Sbjct: 159 FNTGDCFILDLGQNIFAWCGGKSNILERNKARDLA-LAIRDSERQGKAQVEIVTDGEEPA 217
Query: 360 EFWDAL 365
E L
Sbjct: 218 EMIQVL 223
>pdb|3FG6|A Chain A, Structure Of The C-terminus Of Adseverin
pdb|3FG6|C Chain C, Structure Of The C-terminus Of Adseverin
pdb|3FG6|G Chain G, Structure Of The C-terminus Of Adseverin
pdb|3FG6|E Chain E, Structure Of The C-terminus Of Adseverin
pdb|3FG6|F Chain F, Structure Of The C-terminus Of Adseverin
pdb|3FG6|H Chain H, Structure Of The C-terminus Of Adseverin
pdb|3FG6|D Chain D, Structure Of The C-terminus Of Adseverin
pdb|3FG6|B Chain B, Structure Of The C-terminus Of Adseverin
Length = 371
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 260 KRVHAMPASPNSMLRIYRIAPHSSYDPLHLVPKLLNYPV-AQGFDTRGAFIVLVP-SAIY 317
K+ PA P + ++ R L + +++ V A ++ F++ +P ++ Y
Sbjct: 156 KKGGQAPAPPTRLFQVRR--------NLASITRIVEVDVDANSLNSNDVFVLKLPQNSGY 207
Query: 318 VWIGKNCSVMMSNRAREAANQVIRYEKAQGQITSIKEGEEPLEFWDAL 365
+W+GK S + E V++ + + I+EGEEP EFW++L
Sbjct: 208 IWVGKGAS-QEEEKGAEYVASVLKCKTLR-----IQEGEEPEEFWNSL 249
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 194 FEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
++ V+ GG +VH G R+ ++ + Y W +G +A + + + R
Sbjct: 99 YKAVKRNGGVTYVHSTAGXGRAPAVALTYXFWVQGYKLXEAHKLLXSKR 147
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 33.9 bits (76), Expect = 0.37, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 201 GGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
G V+VHC G SRS ++V AYL+ S E+A + + R
Sbjct: 89 GQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIR 130
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 201 GGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
G V VHC G+ R+ LV A + G +EDA Q+++ R
Sbjct: 100 GSCVAVHCVAGLGRAPVLV-ALALIESGMKYEDAIQFIRQKR 140
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 201 GGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
G V VHC G+ R+ LV A + G +EDA Q+++ R
Sbjct: 97 GSCVAVHCVAGLGRAPVLV-ALALIESGMKYEDAIQFIRQKR 137
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 144 LRQNGITHVLNCVGFVCPEYFKGDLVYKT-LWLQDSPSEDITSILYDVFDYFEDV----- 197
L++ G+T ++ VC + LV K + + D P +D + D + +
Sbjct: 57 LKKYGVTTIVR----VCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKF 112
Query: 198 -REQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
E G + VHC G+ R+ LV A + G +EDA Q+++ R
Sbjct: 113 REEPGCCIAVHCVAGLGRAPVLV-ALALIEGGMKYEDAVQFIRQKR 157
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 199 EQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
E G + VHC G+ R+ LV A + G +EDA Q+++ R
Sbjct: 115 EPGCCIAVHCVAGLGRAPVLV-ALALIEGGMKYEDAVQFIRQKR 157
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 205 FVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
VHC G+ R+ +++ +YL+ EG E A V+ R
Sbjct: 93 LVHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLVR 130
>pdb|1ZCK|A Chain A, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|B Chain B, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|C Chain C, Native Structure Prl-1 (Ptp4a1)
Length = 154
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 199 EQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
E G + VHC G+ R+ LV A + G +EDA Q+++ R
Sbjct: 89 EPGCCIAVHCVAGLGRAPVLV-ALALIEGGXKYEDAVQFIRQKR 131
>pdb|1RXD|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|C Chain C, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
Length = 159
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 199 EQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAAR 242
E G + VHC G+ R+ LV A + G +EDA Q+++ R
Sbjct: 94 EPGCCIAVHCVAGLGRAPVLV-ALALIEGGXKYEDAVQFIRQKR 136
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Query: 160 CPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLV 219
CPE +G L Y E+I S+ E + + + VHC GV R+ L+
Sbjct: 220 CPEDVQGFLSY---------LEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLI 270
Query: 220 IAYLM 224
++ LM
Sbjct: 271 LSELM 275
>pdb|3EH1|A Chain A, Crystal Structure Of The Human Copii-Coat Protein Sec24b
Length = 751
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 259 QKRVHAMPA-SPNSMLRIYRIAPHSSYDPLHLVPKLLNYP-----VAQGFDTRGAFIVLV 312
Q VH M PN +YRI + +H+ +++ P A+ GAF++
Sbjct: 591 QPLVHLMKMIHPN----LYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDC 646
Query: 313 PSAIYVWIGKNC 324
S Y+W+GK C
Sbjct: 647 GSVFYIWVGKGC 658
>pdb|1TQI|A Chain A, Crystal Structure Of A. Fulgidus Rio2 Serine Protein
Kinase
pdb|1TQM|A Chain A, Crystal Structure Of A. Fulgidus Rio2 Serine Protein
Kinase Bound To Amppnp
pdb|1ZAO|A Chain A, Crystal Structure Of A.Fulgidus Rio2 Kinase Complexed With
Atp And Manganese Ions
pdb|1ZAR|A Chain A, Crystal Structure Of A.Fulgidus Rio2 Kinase Complexed With
Adp And Manganese Ions
Length = 282
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 14/69 (20%)
Query: 676 ASNDSHDKIKDKKEYDRVHFSLGTI----------DKRMGVANPVLYQWPALSKVESSSF 725
+ S K+K+K++Y +HFS+ I K G+A P +Y W +
Sbjct: 124 VGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEG----NAVLM 179
Query: 726 QVLDSRSVY 734
+++D++ +Y
Sbjct: 180 ELIDAKELY 188
>pdb|4HNK|A Chain A, Crystal Structure Of An Enzyme
pdb|4HNK|B Chain B, Crystal Structure Of An Enzyme
pdb|4HNK|C Chain C, Crystal Structure Of An Enzyme
pdb|4HNK|D Chain D, Crystal Structure Of An Enzyme
pdb|4HNK|E Chain E, Crystal Structure Of An Enzyme
pdb|4HNK|F Chain F, Crystal Structure Of An Enzyme
pdb|4HNK|G Chain G, Crystal Structure Of An Enzyme
pdb|4HNK|H Chain H, Crystal Structure Of An Enzyme
pdb|4HNK|I Chain I, Crystal Structure Of An Enzyme
pdb|4HNK|J Chain J, Crystal Structure Of An Enzyme
pdb|4HNK|K Chain K, Crystal Structure Of An Enzyme
pdb|4HNK|L Chain L, Crystal Structure Of An Enzyme
pdb|4HNK|M Chain M, Crystal Structure Of An Enzyme
pdb|4HNK|N Chain N, Crystal Structure Of An Enzyme
Length = 219
Score = 29.3 bits (64), Expect = 9.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 115 KLAFFDKECSRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDL 168
+L + + E R H+Y+ S N I+ NGIT V++ V + Y D+
Sbjct: 62 QLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVDVI--NYISSDV 113
>pdb|4GM2|A Chain A, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|B Chain B, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|C Chain C, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|D Chain D, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|E Chain E, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|F Chain F, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
pdb|4GM2|G Chain G, The Crystal Structure Of A Peptidase From Plasmodium
Falciparum
Length = 205
Score = 29.3 bits (64), Expect = 9.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 115 KLAFFDKECSRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDL 168
+L + + E R H+Y+ S N I+ NGIT V++ V + Y D+
Sbjct: 48 QLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDVISIVDVI--NYISSDV 99
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,316,140
Number of Sequences: 62578
Number of extensions: 951281
Number of successful extensions: 2013
Number of sequences better than 100.0: 58
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1933
Number of HSP's gapped (non-prelim): 65
length of query: 802
length of database: 14,973,337
effective HSP length: 107
effective length of query: 695
effective length of database: 8,277,491
effective search space: 5752856245
effective search space used: 5752856245
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)