Your job contains 1 sequence.
>003696
MAIILQAFLFCKPSLSLTITTASSSKRYRFRHSISPPRHHSPPPPPRSSSSFSNSRFSYD
PLLIPCALQNVDSEDSKLLNNSNPDEVSESEVSKKSEVVRIVEEVNDREDNLGNNQKLVE
NQEGAGAAVDSKKIPLMVFLMGVWARLSRGIEKLMTWDWLSWWPFWRQEKRIEQLIAEAN
ANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYLPDE
QSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQELIST
ILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKTFKDV
KGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFF
YRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQL
LVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDK
PLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTER
KTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVS
QKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHI
KDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL
LPYREGQLPEQQEELEEDLVLA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003696
(802 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 2868 9.0e-299 1
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 1480 1.1e-151 1
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 1239 6.4e-138 3
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 1239 6.4e-138 3
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 1303 6.2e-133 1
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 1303 6.2e-133 1
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 1290 1.5e-131 1
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 1290 1.5e-131 1
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 1234 2.3e-131 2
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 1288 2.4e-131 1
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 1288 2.4e-131 1
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 1288 2.4e-131 1
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 1287 3.1e-131 1
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 1280 1.7e-130 1
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 1277 3.5e-130 1
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 1249 3.3e-127 1
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 1242 1.8e-126 1
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 1240 2.9e-126 1
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 1239 3.7e-126 1
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 1239 3.7e-126 1
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 1225 1.1e-124 1
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 1224 1.5e-124 1
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 1224 1.5e-124 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 1219 4.9e-124 1
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 1181 7.4e-122 2
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 1193 2.8e-121 1
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 1193 2.8e-121 1
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 1177 1.4e-119 1
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 1175 2.3e-119 1
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 1168 1.3e-118 1
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 1167 1.6e-118 1
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 1160 8.8e-118 1
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 1160 8.8e-118 1
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 1148 1.6e-116 1
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 1142 7.1e-116 1
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 1142 7.1e-116 1
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 1134 5.0e-115 1
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 1132 8.2e-115 1
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 1131 1.0e-114 1
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 1131 1.0e-114 1
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 1081 2.1e-109 1
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 1079 3.4e-109 1
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 1061 2.7e-107 1
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 1040 4.6e-105 1
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 1003 4.6e-103 2
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 1015 2.0e-102 1
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 991 7.1e-100 1
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 961 4.7e-99 2
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 977 2.2e-98 1
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 967 2.5e-97 1
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 967 2.5e-97 1
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 964 5.2e-97 1
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 963 6.6e-97 1
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 960 1.4e-96 1
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 960 1.4e-96 1
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 959 1.8e-96 1
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 959 1.8e-96 1
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 957 2.9e-96 1
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 957 2.9e-96 1
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 956 3.7e-96 1
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 956 3.7e-96 1
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 950 1.6e-95 1
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 950 1.6e-95 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 948 2.6e-95 1
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 948 2.6e-95 1
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 948 2.6e-95 1
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 947 3.3e-95 1
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 931 1.6e-93 1
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 927 4.3e-93 1
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 927 4.3e-93 1
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 927 4.3e-93 1
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 925 7.0e-93 1
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 581 1.5e-91 2
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 581 1.5e-91 2
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 893 1.7e-89 1
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 891 2.8e-89 1
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 886 9.6e-89 1
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 884 1.6e-88 1
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 884 1.6e-88 1
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 882 2.5e-88 1
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 879 5.3e-88 1
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 875 1.4e-87 1
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 872 2.9e-87 1
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 870 4.7e-87 1
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 859 6.9e-86 1
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 841 5.6e-84 1
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 829 1.0e-82 1
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 828 1.3e-82 1
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 506 9.0e-75 2
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 506 9.0e-75 2
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 706 1.1e-69 1
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 681 3.3e-69 2
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 667 1.5e-67 3
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 666 1.2e-65 2
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 636 3.0e-62 1
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 589 1.3e-56 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 570 7.2e-55 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 518 9.5e-50 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 458 2.5e-45 2
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 466 7.1e-44 1
WARNING: Descriptions of 616 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 2868 (1014.6 bits), Expect = 9.0e-299, P = 9.0e-299
Identities = 565/729 (77%), Positives = 627/729 (86%)
Query: 64 IPCALQ--NVDSEDSKLLNNSNPDXXXXXXXXXXXXXXXXXXX-XNDR-----EDNLGNN 115
+PC+L+ NV S+ + +S + NDR E G
Sbjct: 58 LPCSLRQDNVASDSDFIPKDSAFEVTDSAESNRLVSDTEVSELETNDRFVGGEETKSGGE 117
Query: 116 QKLVENQEGAGAAVDSKK--IPLMVFLMGVWARLSRGIEKLMTWDWLSWWPFWRQEKRIE 173
+ V N G D KK ++V +M +WA + R IEK+M W+WLSWWPF RQEKR+E
Sbjct: 118 EAEVSNGVTEGKEEDQKKSKFRIVVLMMALWAAIKRAIEKVMEWEWLSWWPFSRQEKRLE 177
Query: 174 QLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAI 233
+LIAEA+ANPKD A Q ALL+ELNK PEAV++RFEQR+H VDSRGV EY+RALV TNAI
Sbjct: 178 KLIAEADANPKDAALQGALLAELNKHIPEAVVQRFEQREHTVDSRGVAEYIRALVITNAI 237
Query: 234 TEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRF 293
+EYLPDEQ+GKP++LPALLQEL+HRAS N +E F+NPG+SEKQPLHV MV+PKVSNKSRF
Sbjct: 238 SEYLPDEQTGKPSSLPALLQELKHRASGNMDESFVNPGISEKQPLHVTMVNPKVSNKSRF 297
Query: 294 AQELISTILFTVAVGLVWLMGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
AQEL+STILFTVAVGLVW+MGAAALQKYI Y+PKELNKE+ PEKN
Sbjct: 298 AQELVSTILFTVAVGLVWIMGAAALQKYIGSLGGIGTSGVGSSSSYSPKELNKEITPEKN 357
Query: 354 VKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
VKTFKDVKGCDDAKQEL EVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG
Sbjct: 358 VKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 417
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT 473
EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT
Sbjct: 418 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT 477
Query: 474 KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEIL 533
KKTLHQLLVEMDGFEQNEGII+MAATNLPDILDPALTRPGRFDRHIVVP+PDVRGR+EIL
Sbjct: 478 KKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEIL 537
Query: 534 ELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDR 593
ELYLQ KP+++DVDVKAIARGTPGFNGADLANLVNIAAIKAAV+G EKL++ +LEFAKDR
Sbjct: 538 ELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDR 597
Query: 594 ILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPS 653
I+MGTERKTMF+SE+SKKLTAYHESGHAIVA NT+GAHPIHKATIMPRGSALGMVTQLPS
Sbjct: 598 IVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQLPS 657
Query: 654 SDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSD 713
+DETSVS++QLLARLDVCMGGRVAEELIFG DHITTGASSDL ATELA YMVS+CGMS+
Sbjct: 658 NDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSE 717
Query: 714 AIGPVHIKDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSA 773
AIGPVHIK+RPSS+MQSRIDAEVVKLLREAY+RVK+LLK+HEKQLH LANALLEYETL+A
Sbjct: 718 AIGPVHIKERPSSDMQSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYETLTA 777
Query: 774 EEIKRILLP 782
E+IKRILLP
Sbjct: 778 EDIKRILLP 786
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 1480 (526.0 bits), Expect = 1.1e-151, P = 1.1e-151
Identities = 326/610 (53%), Positives = 424/610 (69%)
Query: 184 KDPAKQTALLSEL-NKQSPEAVIKRFE-QRDHEVDSRGVVEYLRALVATNAITEYLPDEQ 241
++ + A L EL + PEAVI+ FE Q ++ + EY++ALV + + +Q
Sbjct: 67 REEVNEVAHLRELIRRNDPEAVIRMFESQPSLHANASALSEYIKALVKVDRL------DQ 120
Query: 242 SGKPTTLP-ALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDP--KVSN-KSRFAQEL 297
S TL + + + F N G K + P +S ++ F ++L
Sbjct: 121 SELVRTLQRGIAGVAREEETFGGLGAFRNVGKPTKDGVLGTASAPIHTISTERTHFKEQL 180
Query: 298 ISTILFTVAVGLVWLMGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKNVKT- 356
STI T+ VG + + G AL I L++EV P + T
Sbjct: 181 WSTIR-TIGVGFLLISGIGAL---IEDRGIGKGLG-----------LHEEVQPSMDSSTK 225
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F DVKG D+AK EL E+V YL++P +FTRLGGKLPKG+LL G PGTGKT+LA+AIAGEAG
Sbjct: 226 FSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAG 285
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHTKK 475
VPFF +GSEFEEMFVGVGARRVR LF AAKK +PCIIFIDEIDA+G +R + + + K
Sbjct: 286 VPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQYMKM 345
Query: 476 TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILEL 535
TL+Q+LVE+DGF+QNEGII++AATN P+ LD AL RPGRFDRHIVVPNPDV GR++ILE
Sbjct: 346 TLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILES 405
Query: 536 YLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRIL 595
++ A+DVD+ IARGTPGF+GADLANLVN+AA+KAA+DG + +T ++LEFAKDRI+
Sbjct: 406 HMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIM 465
Query: 596 MGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSD 655
MG+ERK+ IS+ES+KLTA+HE GHA+VA +TEGA P+HKATI+PRG ALGMV+QLP D
Sbjct: 466 MGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALPVHKATIVPRGMALGMVSQLPDKD 525
Query: 656 ETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAI 715
ETS+S+KQ+LARLDVCMGGRVAEELIFG +T+GASSDL AT+LA MV+ GMS +
Sbjct: 526 ETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKFGMSKEV 585
Query: 716 GPV-HIKD----RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYET 770
G V H D S+E + I++EV +LL +AY+ K +L + K+LHALANALL++ET
Sbjct: 586 GLVAHNYDDNGKSMSTETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHET 645
Query: 771 LSAEEIKRIL 780
LS ++IK +L
Sbjct: 646 LSGKQIKELL 655
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 1239 (441.2 bits), Expect = 6.4e-138, Sum P(3) = 6.4e-138
Identities = 241/439 (54%), Positives = 328/439 (74%)
Query: 345 NKEVMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTG 403
NK+++P +NVK TF DVKGCD+ KQEL E+++YLKN KFT++G KLPKGILL+G PGTG
Sbjct: 240 NKKIIPVENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTG 299
Query: 404 KTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVG 463
KTL+A+AIAGEA VPF +GSEFEEMFVGVGARR+R LFQAAKK APCI+FIDEIDAVG
Sbjct: 300 KTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVG 359
Query: 464 STRKQWEGHT-KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 522
S R + + TL+QLLVE+DGFEQNEGI+++ ATN P LD AL RPGR D+ IVVP
Sbjct: 360 SKRSSRDNSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVP 419
Query: 523 NPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
PD++GR EIL++Y L+ DVD+ ++R T G GADL N++NIAAIK +V+G + +
Sbjct: 420 LPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSV 479
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
+E A DR+++G +RK+ ++EE K +TAYHE GH +V F T+G+ P+HKATIMPRG
Sbjct: 480 DMNSIEQAFDRVVVGLQRKSP-LNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPRG 538
Query: 643 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 702
+LG+ ++P SD+ S K + + +D+ MGG V+EE+IFG++++TTG SSDL AT +A
Sbjct: 539 MSLGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIA 598
Query: 703 HYMVSNCGMS---DAIGP-VHIKDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQL 758
+V N G+ D I +H K S EM+ +ID + ++L ++Y+R K +L +H +L
Sbjct: 599 QSLVMNYGVGINEDNISMFLHDKQNISEEMKIKIDKSIQRILLDSYNRAKNVLNQHIDEL 658
Query: 759 HALANALLEYETLSAEEIK 777
H +A+AL+EYETL+++EIK
Sbjct: 659 HRIASALVEYETLTSDEIK 677
Score = 86 (35.3 bits), Expect = 6.4e-138, Sum P(3) = 6.4e-138
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 168 QEKRIEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRAL 227
+ +R+++L E P D E N +P VIK +E ++ D EY++AL
Sbjct: 41 KNERLDRLKREVRNKPNDNFLILQFYKEANVHNPNEVIKHYENANYIKDESITKEYIKAL 100
Query: 228 VATNAI 233
V TN +
Sbjct: 101 VYTNKL 106
Score = 61 (26.5 bits), Expect = 6.4e-138, Sum P(3) = 6.4e-138
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 261 RNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQELISTI--LFTVAVGLVWLMGAAA- 317
RN + + + K+PL V ++D SNK L STI L VA G V++ G +
Sbjct: 175 RNQHPEMYSLHIDPKKPLKVSVID---SNKKGLWNLLKSTIGFLILVAAGSVYMEGVSQN 231
Query: 318 LQKYI 322
+QK I
Sbjct: 232 VQKGI 236
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 1239 (441.2 bits), Expect = 6.4e-138, Sum P(3) = 6.4e-138
Identities = 241/439 (54%), Positives = 328/439 (74%)
Query: 345 NKEVMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTG 403
NK+++P +NVK TF DVKGCD+ KQEL E+++YLKN KFT++G KLPKGILL+G PGTG
Sbjct: 240 NKKIIPVENVKVTFADVKGCDEVKQELEEIIDYLKNSDKFTKIGAKLPKGILLSGEPGTG 299
Query: 404 KTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVG 463
KTL+A+AIAGEA VPF +GSEFEEMFVGVGARR+R LFQAAKK APCI+FIDEIDAVG
Sbjct: 300 KTLIARAIAGEANVPFLQASGSEFEEMFVGVGARRIRELFQAAKKHAPCIVFIDEIDAVG 359
Query: 464 STRKQWEGHT-KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 522
S R + + TL+QLLVE+DGFEQNEGI+++ ATN P LD AL RPGR D+ IVVP
Sbjct: 360 SKRSSRDNSAVRMTLNQLLVELDGFEQNEGIVVICATNFPQSLDKALVRPGRLDKTIVVP 419
Query: 523 NPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
PD++GR EIL++Y L+ DVD+ ++R T G GADL N++NIAAIK +V+G + +
Sbjct: 420 LPDIKGRYEILKMYSNKIVLSKDVDLHVLSRRTVGMTGADLNNILNIAAIKCSVEGKKSV 479
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
+E A DR+++G +RK+ ++EE K +TAYHE GH +V F T+G+ P+HKATIMPRG
Sbjct: 480 DMNSIEQAFDRVVVGLQRKSP-LNEEEKNITAYHEGGHTLVNFYTKGSDPVHKATIMPRG 538
Query: 643 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 702
+LG+ ++P SD+ S K + + +D+ MGG V+EE+IFG++++TTG SSDL AT +A
Sbjct: 539 MSLGVTWKIPISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIA 598
Query: 703 HYMVSNCGMS---DAIGP-VHIKDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQL 758
+V N G+ D I +H K S EM+ +ID + ++L ++Y+R K +L +H +L
Sbjct: 599 QSLVMNYGVGINEDNISMFLHDKQNISEEMKIKIDKSIQRILLDSYNRAKNVLNQHIDEL 658
Query: 759 HALANALLEYETLSAEEIK 777
H +A+AL+EYETL+++EIK
Sbjct: 659 HRIASALVEYETLTSDEIK 677
Score = 86 (35.3 bits), Expect = 6.4e-138, Sum P(3) = 6.4e-138
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 168 QEKRIEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRAL 227
+ +R+++L E P D E N +P VIK +E ++ D EY++AL
Sbjct: 41 KNERLDRLKREVRNKPNDNFLILQFYKEANVHNPNEVIKHYENANYIKDESITKEYIKAL 100
Query: 228 VATNAI 233
V TN +
Sbjct: 101 VYTNKL 106
Score = 61 (26.5 bits), Expect = 6.4e-138, Sum P(3) = 6.4e-138
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 261 RNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQELISTI--LFTVAVGLVWLMGAAA- 317
RN + + + K+PL V ++D SNK L STI L VA G V++ G +
Sbjct: 175 RNQHPEMYSLHIDPKKPLKVSVID---SNKKGLWNLLKSTIGFLILVAAGSVYMEGVSQN 231
Query: 318 LQKYI 322
+QK I
Sbjct: 232 VQKGI 236
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
Identities = 262/433 (60%), Positives = 333/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 273 KNV-TFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAV 331
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+RSLF+ AK APC+IFIDE+D+VG R +
Sbjct: 332 AGEADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPM 391
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG++++ ATN P+ LD AL RPGRFD + VP PDVRGR
Sbjct: 392 HPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGR 451
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG + +T ELEF
Sbjct: 452 TEILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEF 511
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I E++K +TAYHESGHAI+A+ T+ A PI+KATIM RG+ LG V+
Sbjct: 512 SKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHVS 571
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D S ++ QLLA++DVCMGGR AEELIFG DHITTGASSD +AT++A MV+
Sbjct: 572 LLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVTRF 631
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ EV LLR++Y+R K +LK H K+ LA ALL+
Sbjct: 632 GMSEKLGVMTYTDTGKVSPETQSAIEQEVRTLLRDSYERAKNILKTHAKEHKNLAEALLK 691
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 692 YETLDAKEIQIVL 704
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
Identities = 262/433 (60%), Positives = 333/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 278 KNV-TFEHVKGVEEAKQELQEVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAV 336
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+RSLF+ AK APC+IFIDE+D+VG R +
Sbjct: 337 AGEADVPFYYASGSEFDEMFVGVGASRIRSLFREAKANAPCVIFIDELDSVGGKRIESPM 396
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG++++ ATN P+ LD AL RPGRFD + VP PDVRGR
Sbjct: 397 HPYSRQTINQLLAEMDGFKPNEGVVIIGATNFPEALDNALIRPGRFDMQVTVPKPDVRGR 456
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG + +T ELEF
Sbjct: 457 TEILKWYLNKIKYDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEF 516
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I E++K +TAYHESGHAI+A+ T+ A PI+KATIM RG+ LG V+
Sbjct: 517 SKDKILMGPERRSVEIDEKNKTITAYHESGHAIIAYYTKDAMPINKATIMTRGTTLGHVS 576
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D S ++ QLLA++DVCMGGR AEELIFG DHITTGASSD +AT++A MV+
Sbjct: 577 LLPENDRWSETRSQLLAQMDVCMGGRAAEELIFGSDHITTGASSDFDNATKIAKLMVTRF 636
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ EV LLR++Y+R K +LK H K+ LA ALL+
Sbjct: 637 GMSEKLGVMTYTDTGKVSPETQSAIEQEVRTLLRDSYERAKNILKTHAKEHKNLAEALLK 696
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 697 YETLDAKEIQIVL 709
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 1290 (459.2 bits), Expect = 1.5e-131, P = 1.5e-131
Identities = 261/433 (60%), Positives = 331/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 276 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 334
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 394
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 515 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 574
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 575 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ E+ LLRE+Y+R K +LK H K+ LA ALL
Sbjct: 635 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLT 694
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 695 YETLDAKEIQIVL 707
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 1290 (459.2 bits), Expect = 1.5e-131, P = 1.5e-131
Identities = 261/433 (60%), Positives = 331/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 276 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 334
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 394
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 515 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 574
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 575 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ E+ LLRE+Y+R K +LK H K+ LA ALL
Sbjct: 635 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLT 694
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 695 YETLDAKEIQIVL 707
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 1234 (439.4 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
Identities = 266/566 (46%), Positives = 372/566 (65%)
Query: 233 ITEYLPDEQSGKPTTLPALLQELQHRA--SRNTNEPFLNP-------GVSEKQPLHVVMV 283
+ ++ D S +T P+L LQ+ S T P P G S K P++VV+
Sbjct: 149 VPKFTSDTSSTVSST-PSLNHSLQNSMPPSTPTPPPVWAPTIVSSALGTSSKTPVYVVVD 207
Query: 284 DPKVSNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIXXXXXXXXXXXXXXXXYAPKE 343
+P+ + R +F GL ++ Y
Sbjct: 208 EPRFTKFFR---------IFKFIAGL-------SVASYFVLLGMSIFAETSGLNNIMTNT 251
Query: 344 LNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGT 402
+E M E+ + F DV+G D+AK+EL E+V++L++P+ FTRLGGKLP+G+LLTG PGT
Sbjct: 252 TEQEPMEERAINVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGT 311
Query: 403 GKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAV 462
GKT+LA+A+AGEA VPFF+ +GS+F+EM+VGVGA+RVR LF AA+K+AP IIFIDE+DA+
Sbjct: 312 GKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAI 371
Query: 463 GSTRKQWEG-HTKKTLHQLLVEMDGFEQNEG----IILMAATNLPDILDPALTRPGRFDR 517
G R + H ++TL+QLLV++DGF +NE ++ + ATN P+ LDPALTRPGRFDR
Sbjct: 372 GQKRNARDAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDR 431
Query: 518 HIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVD 577
HI VP PDVRGR IL + + PL DVD+ IARGT GF GADLANL+N AA+ A+ +
Sbjct: 432 HIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKN 491
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
++ +LE++KDRILMG ERK+ FI+ E+K +TAYHE GHA+VA T+ A +KAT
Sbjct: 492 LSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKAT 551
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
IMPRGS+LGM LP D+ S ++++ LA LDV MGGR AEEL++G+D IT+GA +D+
Sbjct: 552 IMPRGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDK 611
Query: 698 ATELAHYMVSNCGMSDAIGPVHIK---DRPSSEMQSRIDAEVVKLLREAYDRVKALLKKH 754
AT++A MV+ GMSD IGPV ++ D S ++ +++E+ LL +Y+R +LLK H
Sbjct: 612 ATQVARRMVTEFGMSDRIGPVSLEAEMDNLSPATRALVESEIKSLLEASYERSLSLLKSH 671
Query: 755 EKQLHALANALLEYETLSAEEIKRIL 780
+K+L ALA AL++YE L+AEE+ R++
Sbjct: 672 KKELDALATALVDYEFLTAEEMNRVV 697
Score = 75 (31.5 bits), Expect = 2.3e-131, Sum P(2) = 2.3e-131
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 179 ANANPKDPAKQTALLSELNKQSPEAVIKRFE 209
ANAN DP Q L EL PEA+I R+E
Sbjct: 64 ANANMSDPYMQAKLYKELADNFPEAIISRYE 94
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 260/433 (60%), Positives = 331/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 310 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 368
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 369 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 428
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 429 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 488
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 489 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 548
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 549 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 608
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 609 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 668
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ E+ LLR++Y+R K +LK H K+ LA ALL
Sbjct: 669 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLT 728
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 729 YETLDAKEIQIVL 741
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 260/433 (60%), Positives = 331/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 334 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAV 392
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 393 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 452
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 453 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 512
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 513 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 572
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 573 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 632
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 633 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 692
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ E+ LLR++Y+R K +LK H K+ LA ALL
Sbjct: 693 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLT 752
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 753 YETLDAKEIQIVL 765
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 260/433 (60%), Positives = 331/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 329 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 387
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 388 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 447
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 448 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 507
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 508 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 567
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 568 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 627
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 628 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 687
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ E+ LLR++Y+R K +LK H K+ LA ALL
Sbjct: 688 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLT 747
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 748 YETLDAKEIQIVL 760
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 1287 (458.1 bits), Expect = 3.1e-131, P = 3.1e-131
Identities = 261/433 (60%), Positives = 330/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 276 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 334
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R ++
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPM 394
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T+ QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 395 HPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 515 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 574
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + + QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 575 LLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ E+ LLRE+Y+R K +LK H K+ LA ALL
Sbjct: 635 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLT 694
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 695 YETLDAKEIQIVL 707
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 1280 (455.6 bits), Expect = 1.7e-130, P = 1.7e-130
Identities = 258/433 (59%), Positives = 332/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AK EL EVVE+L+NP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 283 KNV-TFEHVKGVEEAKNELQEVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 341
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 342 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKGNAPCVIFIDELDSVGGKRIESPM 401
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 402 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 461
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL+ + V+ + IARGT GF+GA+L NLVN AA+KAAVDG + +T ELEF
Sbjct: 462 TEILKWYLKKIKVDSAVEAEVIARGTVGFSGAELENLVNQAALKAAVDGKDMVTMKELEF 521
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
AKD+ILMG ER++ I + +K++TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 522 AKDKILMGPERRSAEIDKRNKEITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 581
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D S ++ QLLA++DV MGGRVAEELIFG ++ITTGASSD SAT++A MV+
Sbjct: 582 MLPENDRWSETRAQLLAQMDVSMGGRVAEELIFGNENITTGASSDFDSATKIAKMMVTRF 641
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E Q+ I+ EV LLR++Y+R KALLK K+ LA ALL
Sbjct: 642 GMSEKLGVMTYSDLTKQSPETQAAIEHEVRILLRDSYERAKALLKSRAKEHRNLAEALLR 701
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 702 YETLDAKEIQLVL 714
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 1277 (454.6 bits), Expect = 3.5e-130, P = 3.5e-130
Identities = 260/435 (59%), Positives = 331/435 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 276 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 334
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 394
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 455 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 515 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 574
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTG--ASSDLHSATELAHYMVS 707
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTG ASSD +AT++A MV+
Sbjct: 575 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGSDHITTGYCASSDFDNATKIAKRMVT 634
Query: 708 NCGMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANAL 765
GMS+ +G + D + S E QS I+ E+ LLR++Y+R K +LK H K+ LA AL
Sbjct: 635 KFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEAL 694
Query: 766 LEYETLSAEEIKRIL 780
L YETL A+EI+ +L
Sbjct: 695 LTYETLDAKEIQIVL 709
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 1249 (444.7 bits), Expect = 3.3e-127, P = 3.3e-127
Identities = 249/433 (57%), Positives = 330/433 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KN+ TF+ VKG ++AK EL +VVE+L+NP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 290 KNI-TFEHVKGVEEAKNELQDVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 348
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 349 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFKEAKASAPCVIFIDELDSVGGKRIESPM 408
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN + LD AL RPGRFD + VP PDV+GR
Sbjct: 409 HPYSRQTINQLLAEMDGFKPNEGVIVIGATNFAEALDNALVRPGRFDMQVTVPIPDVKGR 468
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EILE YL+ + +D + IARGT GF+GA+L NLVN AA+KAA DG + +T EL+F
Sbjct: 469 TEILEWYLKKIKVDSAIDAEIIARGTVGFSGAELENLVNQAALKAAADGKDLVTMKELKF 528
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
AKD+ILMG ER+++ I + +K +TAYHESGHAIVA+ T+ A PI+KATIMPRG +LG V+
Sbjct: 529 AKDKILMGPERRSVEIDKRNKTITAYHESGHAIVAYYTKDAMPINKATIMPRGPSLGHVS 588
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D S ++ QLLA++DV MGGRVAEEL+FG D IT+GASSD AT++A MV+
Sbjct: 589 LLPENDRWSETRAQLLAQMDVSMGGRVAEELVFGNDQITSGASSDFDGATKIAQMMVTRF 648
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMSD +G + D + S E ++ ++ E+ LL+ +Y+R K +LK + K+ LA+ALL
Sbjct: 649 GMSDKLGVMTYSDLTKHSPETRAAVEQEIRVLLQSSYERAKKILKTYSKEHKLLADALLT 708
Query: 768 YETLSAEEIKRIL 780
YETL+A+EI+ IL
Sbjct: 709 YETLNAKEIQMIL 721
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 1242 (442.3 bits), Expect = 1.8e-126, P = 1.8e-126
Identities = 274/615 (44%), Positives = 395/615 (64%)
Query: 178 EANANPKDPAKQTALLSELNKQS-PEAVIKRFEQRDHEVDSRGVVEYLRALVA------T 230
EAN + P Q A L + + P+ V+ RFE + Y+ AL
Sbjct: 110 EANKDLTSPDAQAAFYKLLLQSNYPQYVVSRFETPGIASSPECMELYMEALQRIGRHSEA 169
Query: 231 NAITEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGV--SEKQPLHVVMVDPKVS 288
+A+ + L S P+L +++ + N P + + S K+PLHVV+ + +
Sbjct: 170 DAVRQNLLTASSAGAVN-PSLASSSSNQSGYHGNFPSMYSPLYGSRKEPLHVVVSESTFT 228
Query: 289 NKSRFAQELISTILFTVAVGLVWLMGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNKEV 348
SR+ + L+ +F + L + KYI A K ++
Sbjct: 229 VVSRWVKWLL---VFGI---LTYSFSEGF--KYITENTTLLKSSEV-----ADKSVD--- 272
Query: 349 MPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 408
+ + NVK F DV GCD+A+ EL E+V++LK+P+K+ LGGKLPKG+LLTG PGTGKTLLA
Sbjct: 273 VAKTNVK-FDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLA 331
Query: 409 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK- 467
+A AGEAGV FF+ +GSEF+E++VGVGA+R+R LF A+ +AP IIFIDE+DA+G R
Sbjct: 332 RATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNP 391
Query: 468 QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVR 527
+ + + K+TL+QLLVE+DGF Q GII++ ATN P+ LD ALTRPGRFD+ + V PDVR
Sbjct: 392 KDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVR 451
Query: 528 GRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATEL 587
GR +IL+ +++ LAD+VD IARGTPG +GA+LANLVN AA+ A + +
Sbjct: 452 GRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMSHF 511
Query: 588 EFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGM 647
E+AKD+ILMG ERKTM +++ ++K TA+HE+GHAI+A T GA P++KATI+PRG ALG+
Sbjct: 512 EWAKDKILMGAERKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATILPRGRALGI 571
Query: 648 VTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
QLP D+ +++++ ARLDVCMGG++AEELI+G+D+ T+G SDL SAT A MV+
Sbjct: 572 TFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVT 631
Query: 708 NCGMSDAIGPVHIKDRP---SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANA 764
GMSD +GPV++ + S++++ D EV++LL+++ +R + LL K +LH LA
Sbjct: 632 QYGMSDDVGPVNLSENWESWSNKIRDIADNEVIELLKDSEERARRLLTKKNVELHRLAQG 691
Query: 765 LLEYETLSAEEIKRI 779
L+EYETL A EI+++
Sbjct: 692 LIEYETLDAHEIEQV 706
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 1240 (441.6 bits), Expect = 2.9e-126, P = 2.9e-126
Identities = 249/444 (56%), Positives = 321/444 (72%)
Query: 347 EVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
EV PE+ TF+DVKGCD+AKQEL EVVE+LK+P KF+ LGGKLPKG+LL G PGTGKTL
Sbjct: 289 EVDPEEINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTL 348
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LA+A+AGEA VPFF+ AG EF+E+ VG GARRVR LF+AAK +APC+IFIDEID+VG+ R
Sbjct: 349 LARAVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKR 408
Query: 467 KQWEGH--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
H +T++QLL EMDGF QN G+I++ ATN D LD AL RPGRFD ++V P
Sbjct: 409 TNSVLHPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVSTP 468
Query: 525 DVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 584
D GR+EIL LYL K L D++D+ +ARGT GF GADL N++N AA++AA+DG E ++
Sbjct: 469 DFTGRKEILSLYLT-KILHDEIDLDMLARGTSGFTGADLENMINQAALRAAIDGAETVSM 527
Query: 585 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 644
LE A+D++LMG ERK EE+ +TAYHE GHAIVAF T+ +HP+HK TIMPRG +
Sbjct: 528 KHLETARDKVLMGPERKARLPDEEANTITAYHEGGHAIVAFYTKESHPLHKVTIMPRGPS 587
Query: 645 LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHY 704
LG +P + V++ QLLA +D MGGR AEEL+FG D IT+GASSDL AT +A +
Sbjct: 588 LGHTAYIPEKERYHVTKAQLLAMMDTMMGGRAAEELVFGTDKITSGASSDLKQATSIATH 647
Query: 705 MVSNCGMSDAIGPVHIK--------DRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEK 756
MV + GMSD +G I+ D +DAE+ ++L ++Y+R KA+L+KH +
Sbjct: 648 MVRDWGMSDKVGLRTIEASKGLGTGDTLGPNTIEAVDAEIKRILSDSYERAKAILRKHTR 707
Query: 757 QLHALANALLEYETLSAEEIKRIL 780
+ ALA ALL+YETL A++IK IL
Sbjct: 708 EHKALAEALLKYETLDADDIKAIL 731
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1239 (441.2 bits), Expect = 3.7e-126, P = 3.7e-126
Identities = 244/443 (55%), Positives = 334/443 (75%)
Query: 347 EVMPE-KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
++M E +N TF DV G D+AK+EL+E+V++LK+ +F +LGGK+PKG LL G+PGTGKT
Sbjct: 144 KLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKT 203
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLA+AIAGEA VPFF +GS+F EMFVGVGA RVR +F+ KK APCIIFIDEIDAVG
Sbjct: 204 LLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRH 263
Query: 466 RKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R G ++TL+QLLVEMDGFE NEG+I++AATN PD+LD AL RPGRFDR + +
Sbjct: 264 RGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTI 323
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 581
PD+ GR++I+ ++++ P A DV+++ IARGTPGF+GADLANLVN AA+ AA +
Sbjct: 324 SIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKI 383
Query: 582 LTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR 641
+T ++ E+A+D+++MG ERK++ ++EE ++LTAYHE+GHAI+AF TE + PIHKATI+PR
Sbjct: 384 VTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEASDPIHKATIIPR 443
Query: 642 GSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 701
G +LG+V +LP SD S ++++++A L V MGGR AEELIFG +T+GASSD+ AT+L
Sbjct: 444 GRSLGLVMRLPESDRVSHTREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDL 503
Query: 702 AHYMVSNCGMSDAIGPV-HIKDRP---SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQ 757
A MV GMSD +GP+ H D+ S+ + + ID EV ++ A +R K+LL +H +
Sbjct: 504 AKAMVMKWGMSDKVGPLYHNDDKNDTISNNLANLIDEEVKLIVTSALERAKSLLNEHLES 563
Query: 758 LHALANALLEYETLSAEEIKRIL 780
LH +A LLE+ETL+ E+IK I+
Sbjct: 564 LHIVAKNLLEFETLTGEDIKNII 586
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 1239 (441.2 bits), Expect = 3.7e-126, P = 3.7e-126
Identities = 244/443 (55%), Positives = 334/443 (75%)
Query: 347 EVMPE-KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
++M E +N TF DV G D+AK+EL+E+V++LK+ +F +LGGK+PKG LL G+PGTGKT
Sbjct: 144 KLMTENRNKVTFNDVAGIDEAKEELIEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKT 203
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLA+AIAGEA VPFF +GS+F EMFVGVGA RVR +F+ KK APCIIFIDEIDAVG
Sbjct: 204 LLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRH 263
Query: 466 RKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R G ++TL+QLLVEMDGFE NEG+I++AATN PD+LD AL RPGRFDR + +
Sbjct: 264 RGIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTI 323
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 581
PD+ GR++I+ ++++ P A DV+++ IARGTPGF+GADLANLVN AA+ AA +
Sbjct: 324 SIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKI 383
Query: 582 LTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR 641
+T ++ E+A+D+++MG ERK++ ++EE ++LTAYHE+GHAI+AF TE + PIHKATI+PR
Sbjct: 384 VTMSDFEYARDKVMMGAERKSLMMTEEERRLTAYHEAGHAIIAFFTEASDPIHKATIIPR 443
Query: 642 GSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 701
G +LG+V +LP SD S ++++++A L V MGGR AEELIFG +T+GASSD+ AT+L
Sbjct: 444 GRSLGLVMRLPESDRVSHTREKMIADLTVAMGGRAAEELIFGYHKVTSGASSDIKQATDL 503
Query: 702 AHYMVSNCGMSDAIGPV-HIKDRP---SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQ 757
A MV GMSD +GP+ H D+ S+ + + ID EV ++ A +R K+LL +H +
Sbjct: 504 AKAMVMKWGMSDKVGPLYHNDDKNDTISNNLANLIDEEVKLIVTSALERAKSLLNEHLES 563
Query: 758 LHALANALLEYETLSAEEIKRIL 780
LH +A LLE+ETL+ E+IK I+
Sbjct: 564 LHIVAKNLLEFETLTGEDIKNII 586
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
Identities = 257/537 (47%), Positives = 362/537 (67%)
Query: 253 QELQHRASRNTNEPFLNPGV-----SEKQPLHVVMVDPKVSNKSRFAQELISTILFTVAV 307
Q+ QH+ TN + G+ S ++P+HVV+ + ++ S++ + LI L T
Sbjct: 132 QQQQHQTQYQTNGGNIGVGLPYGFGSRQEPVHVVVSESLLTILSKWLKWLIPIALLTY-- 189
Query: 308 GLVWLMGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKNVKTFKDVKGCDDAK 367
GA Y+ +K V ++ FKDV+GCD+A+
Sbjct: 190 ------GATNAFNYLVENGTIFRNSETS---------DKSVDVSQSTVRFKDVQGCDEAR 234
Query: 368 QELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEF 427
EL E+V++LK+PSKFT LGGKLPKG+LLTG PGTGKTLLA+A AGEAGVPFF+ +GSEF
Sbjct: 235 AELEEIVDFLKDPSKFTGLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVPFFFMSGSEF 294
Query: 428 EEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHTKKTLHQLLVEMDG 486
+E++VGVGA+R+R LF A+ KAP IIFIDE+DA+G R + + + K+TL+QLLVE+DG
Sbjct: 295 DELYVGVGAKRIRELFSQARDKAPAIIFIDELDAIGGKRNPKDQAYAKQTLNQLLVELDG 354
Query: 487 FEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDV 546
F Q EGII++ ATN P+ LD ALTRPGRFD+ ++V PDVRGR +IL+ ++Q+ ADDV
Sbjct: 355 FSQTEGIIIIGATNFPESLDKALTRPGRFDKEVIVDLPDVRGRIDILKHHMQNVETADDV 414
Query: 547 DVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFIS 606
D IARGTPG +GA+L NLVN AA+ A+ + E+AKD+ILMG +K M I+
Sbjct: 415 DPSIIARGTPGLSGAELMNLVNQAAVHASQLSAPAVDMNHFEWAKDKILMGAAKKKMVIT 474
Query: 607 EESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLA 666
EES+ TAYHE+GHAI+A ++GA P++KATI+PRG ALG+ QLP D+ +S+++ A
Sbjct: 475 EESRINTAYHEAGHAIMAMFSKGATPLYKATILPRGRALGITFQLPEMDKVDMSKQECFA 534
Query: 667 RLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRPSS 726
RLDVCMGG++AEE+I G++++T+G +SDL +AT +A MV++ GMSD IGPV + D S
Sbjct: 535 RLDVCMGGKIAEEMINGKENVTSGCASDLSNATSVARAMVTSYGMSDKIGPVRLSDDWES 594
Query: 727 ---EMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
++++ D EV L ++ R + LL +L LA LLEYETL+ EE+++++
Sbjct: 595 WSPQIRNMADNEVRDYLLDSEKRTRKLLYDKRLELKRLAEGLLEYETLTKEEMEKVV 651
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 240/433 (55%), Positives = 325/433 (75%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TF DV G ++AK+EL+E+V++LK+ KFT+LGGK+PKG LL G+PGTGKTLLA+AIAGEA
Sbjct: 156 TFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEA 215
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 471
VPFF +GS+F EMFVGVGA RVR +F+ KK APCIIF+DEIDAVG R G
Sbjct: 216 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGND 275
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+QLLVEMDGFE NEG++++AATN PD+LDPAL RPGRFDR + + PD+ GR++
Sbjct: 276 EREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREK 335
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
I+ ++ + PLA DVD++ IARGTPGF+GADLANLVN AA+ AA + +T + E+A+
Sbjct: 336 IIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEYAR 395
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
D+++MG ERK+M + EE ++LTAYHE+GHA+VAF+ + PIHKATI+PRG +LG+V +L
Sbjct: 396 DKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRGRSLGLVMRL 455
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P +D S +++++LA L V MGGR AEELIFG + +T+GASSD+ AT+LA MV GM
Sbjct: 456 PETDRVSHTREKMLADLTVAMGGRAAEELIFGYNKVTSGASSDIKQATDLAKSMVMKWGM 515
Query: 712 SDAIGPVHIKD----RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
SD++GP++ D R S+ + + ID EV ++ A K +L KH LHA+A LLE
Sbjct: 516 SDSVGPLYHSDEAHERISTNLANLIDDEVKSIVSTALAEAKDVLTKHSDALHAIAANLLE 575
Query: 768 YETLSAEEIKRIL 780
+ETL+ ++I I+
Sbjct: 576 FETLTGDDIADII 588
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 240/433 (55%), Positives = 325/433 (75%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TF DV G ++AK+EL+E+V++LK+ KFT+LGGK+PKG LL G+PGTGKTLLA+AIAGEA
Sbjct: 156 TFDDVAGIEEAKEELIEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEA 215
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 471
VPFF +GS+F EMFVGVGA RVR +F+ KK APCIIF+DEIDAVG R G
Sbjct: 216 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHRGIGLGGGND 275
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+QLLVEMDGFE NEG++++AATN PD+LDPAL RPGRFDR + + PD+ GR++
Sbjct: 276 EREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGREK 335
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
I+ ++ + PLA DVD++ IARGTPGF+GADLANLVN AA+ AA + +T + E+A+
Sbjct: 336 IIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDFEYAR 395
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
D+++MG ERK+M + EE ++LTAYHE+GHA+VAF+ + PIHKATI+PRG +LG+V +L
Sbjct: 396 DKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATIIPRGRSLGLVMRL 455
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P +D S +++++LA L V MGGR AEELIFG + +T+GASSD+ AT+LA MV GM
Sbjct: 456 PETDRVSHTREKMLADLTVAMGGRAAEELIFGYNKVTSGASSDIKQATDLAKSMVMKWGM 515
Query: 712 SDAIGPVHIKD----RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
SD++GP++ D R S+ + + ID EV ++ A K +L KH LHA+A LLE
Sbjct: 516 SDSVGPLYHSDEAHERISTNLANLIDDEVKSIVSTALAEAKDVLTKHSDALHAIAANLLE 575
Query: 768 YETLSAEEIKRIL 780
+ETL+ ++I I+
Sbjct: 576 FETLTGDDIADII 588
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 1219 (434.2 bits), Expect = 4.9e-124, P = 4.9e-124
Identities = 279/618 (45%), Positives = 376/618 (60%)
Query: 173 EQLIAEANANPKDPAKQTALLSELNKQSP-EAVIKRFEQRDHEVDSRGVVEYLRALVATN 231
E++++ A++ P D Q EL + + ++KRFE + V Y +ALV +
Sbjct: 117 EKVLSNADSLPNDENIQEMAYKELIEMGDYDTIVKRFESLAFSSNEECVRYYFKALVYSG 176
Query: 232 AITEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFL---N--PGVSEKQPLHVVMVDPK 286
I + P T + S + F N P V+EK +H V P
Sbjct: 177 KINKANLGMTKLPPPTKKMTKAAREALGSEEAMKGFFLRFNHFPEVNEK--IHQKPVVP- 233
Query: 287 VSNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNK 346
V N + ++ +S F V L+WL L + Y KE ++
Sbjct: 234 VFNINANSKTNLSW--FDRFVSLLWLPVLLFLVYSLTSETSTVKEANGNKPQYFAKEYDE 291
Query: 347 EVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
+ +F DVKG + K+EL E+V+YL +P+K+ +G KLPKG+LL+G PGTGKTL
Sbjct: 292 T---NQTPTSFDDVKGIQEVKEELEEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTL 348
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LA+AIAGEAGV F Y GS F+E +VGVG+RRVR LF AA++K PCIIFIDEIDAVG +R
Sbjct: 349 LARAIAGEAGVSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSR 408
Query: 467 KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
H +TL QLL EMDGFE N I+++ ATN P+ LDPAL RPGRFDRHI VP PD+
Sbjct: 409 NT--AHHNETLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDM 466
Query: 527 RGRQEILELYLQDKPLADDVDVKA--IARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 584
+GR EI++ YL K + V+VKA IAR TPGF GADL+NL+N AAIKA +G E ++
Sbjct: 467 KGRSEIIDHYL--KKVKHTVEVKADTIARATPGFTGADLSNLINTAAIKAVQNGKETISI 524
Query: 585 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 644
+++ A+D ILMG R +SEE+++ TAYHE+GHA+VA TE A PIHKATI+ RG A
Sbjct: 525 KQIDDARDDILMGRARLNAVMSEEARRNTAYHEAGHALVAAMTEAADPIHKATIVQRGQA 584
Query: 645 LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHY 704
LGMV+QLP D ++KQ++ARL +C+ GR AEE+ FG D +T+GASSD A+ LA
Sbjct: 585 LGMVSQLPEMDHVQYTRKQMMARLAICLAGRAAEEIFFGVDGVTSGASSDFQQASSLAFS 644
Query: 705 MVSNCGMSDAIGPVHIKDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANA 764
M++ GMSD +G ++ KD+ S E+Q I+ EV LL + Y K L+ K+ + L
Sbjct: 645 MITKWGMSDKVGFIYHKDKTSPEVQKIIEDEVKDLLDKQYQYSKELIIKNRDNMEKLVGQ 704
Query: 765 LLEYETLSAEEIKRILLP 782
LLE ETL+ EEI +IL P
Sbjct: 705 LLEKETLTGEEILKILNP 722
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 1181 (420.8 bits), Expect = 7.4e-122, Sum P(2) = 7.4e-122
Identities = 243/444 (54%), Positives = 315/444 (70%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TF+DV G D+AK+EL E++++LK+P KFT+LGG++PKG+LL G PGTGKTLLA+A+AGEA
Sbjct: 151 TFEDVAGVDEAKEELEEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGEA 210
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW--EGHT 473
GVPFF +GS+F EMFVGVGA RVR LF KK APCIIFIDEIDAVG R GH
Sbjct: 211 GVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHD 270
Query: 474 KK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++ TL+QLLVEMDGFE NEG+IL+AATN PD+LDPAL RPGRFDR +VVP PDV+GR+
Sbjct: 271 EREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGREM 330
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++ + PLA DVD+ IARGTPGF+GADL+N+VN AA+ AA + + + AK
Sbjct: 331 ILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEMKDFDDAK 390
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
D++LMG ER++M ISEE KK TAYHE+GH +VA G P+HK +I+PRG ALG+ QL
Sbjct: 391 DKVLMGVERRSMVISEEEKKNTAYHEAGHTLVAKLIPGTDPVHKVSIIPRGRALGVTMQL 450
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P D+ S +++ LL R+ V MGGR AEE+IF + +TTGA +D+ ATE+A MV GM
Sbjct: 451 PIEDKHSYNKESLLNRIAVLMGGRAAEEIIF--NELTTGAGNDIERATEIARKMVCEWGM 508
Query: 712 SDAIGPVHIKDRPSSEMQSR---------------IDAEVVKLLREAYDRVKALLKKHEK 756
S+ +GPV + S R ID E+ K++ +Y RVK LL ++
Sbjct: 509 SEKMGPVTFGKKEESIFLGRDMSMHKNYSEATAVEIDEEIRKIIDGSYSRVKQLLNENLS 568
Query: 757 QLHALANALLEYETLSAEEIKRIL 780
LH LA L+E E L+ +E+ RI+
Sbjct: 569 VLHCLATQLIEKENLTGDEVDRII 592
Score = 38 (18.4 bits), Expect = 7.4e-122, Sum P(2) = 7.4e-122
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 115 NQKLVENQEGAGAAVDSKKI----------PLMVFLMGVWARLSRGIE 152
++KL+E + A + +K+ PL+ FL+GVW R ++
Sbjct: 80 SEKLLEKKINVSAKPEEEKVSWFSIFISWFPLL-FLVGVWIFFMRQMQ 126
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 242/403 (60%), Positives = 308/403 (76%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 276 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 334
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 394
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 455 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 515 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 574
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 575 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKAL 750
GMS+ +G + D + S E QS I+ E+ LLR D+++ L
Sbjct: 635 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRN--DKMEKL 675
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 243/439 (55%), Positives = 319/439 (72%)
Query: 353 NVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
N TF DV G D+AK+EL E+VE+L+ P KF +LGGK+PKG LL G PGTGKTLLAKAIA
Sbjct: 152 NKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIA 211
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG- 471
GEA VPFF +GS+F EMFVGVGA RVR +F+ KK APC+IFIDEIDAVG R G
Sbjct: 212 GEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGG 271
Query: 472 ---HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
++TL+QLLVEMDGFE NEG+I++AATN PD+LDPAL RPGRFDR I + PD+ G
Sbjct: 272 GNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAG 331
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
RQ+ILE++L+ P A +V+V IARGTPGF+GADLANLVN +A+ AA + +T + E
Sbjct: 332 RQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDFE 391
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMV 648
+A+D+ILMG ERK++ + EE K LTAYHE+GHAI + E + PIHKATI+PRG ALG+V
Sbjct: 392 YARDKILMGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDPIHKATIIPRGRALGLV 451
Query: 649 TQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSN 708
+LP D S ++ ++ A L V MGGR AE++IFG D T+GA+SD+ AT LA MV+
Sbjct: 452 MRLPEHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDIKQATHLARSMVTK 511
Query: 709 CGMSDAIGPVHIKDR--PSS-----EMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHAL 761
GMS+ +GP+ ++ P++ EM + ID+EV +L+ +A +L ++ + LH +
Sbjct: 512 WGMSEKVGPLLYGEQNDPNNHILSIEMSNLIDSEVKQLVTDALKEATKILNENIESLHRV 571
Query: 762 ANALLEYETLSAEEIKRIL 780
A ALLEYETL+ +E+ +L
Sbjct: 572 AKALLEYETLTGQELSDLL 590
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 268/611 (43%), Positives = 376/611 (61%)
Query: 179 ANANPKDPAKQTALLSELNKQS-PEAVIKRFEQRDHEVDSRGVVE--YLRALVATNA-IT 234
AN NP Q A L + + P VI+R+ R S V E YL+AL ++
Sbjct: 147 ANNNPSSANAQNAFYQALLRANMPAIVIERY--RSGHFSSNAVSEQIYLKALERVGGGVS 204
Query: 235 EYLPDEQSG-KPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRF 293
+ G + + A+ Q + A++N G+S KQ K +
Sbjct: 205 APAANLNQGLRSDQIQAVGQAV---AAQNQGGQI---GISSKQS----GTGAKEAPLYVV 254
Query: 294 AQELISTILFTVAVGLVWLMGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
+E + + +F V + L A A I P + E PE
Sbjct: 255 VEESLGSAVFRW-VKFIVLFCAFAYASMIVLSIVLETTGVLKNIK-GPH--SNEAQPEHQ 310
Query: 354 VKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
F DV GCD+AK EL E+VE+L NP +F+ LGGKLPKG+LL G PGTGKTLLA+A+AG
Sbjct: 311 TVRFSDVHGCDEAKDELQELVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAG 370
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG-H 472
EAGVPFFY +GSEF+E++VGVGA+RVR LF A+ K+P IIFIDE+DA+G+ R + + +
Sbjct: 371 EAGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKRNERDAAY 430
Query: 473 TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 532
K+TL+QLL E+DGF Q+ G+I++AATN P++LD ALTRPGRFDR +VV PDVRGR +I
Sbjct: 431 VKQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGRMDI 490
Query: 533 LELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 592
L+ ++++ ++ DVDV IARGT GF+GADL NLVN AAI A+ + K+T + ++AKD
Sbjct: 491 LKHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFASRNKQSKVTPKDFDYAKD 550
Query: 593 RILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLP 652
+I+MG E ++ I ++ K LTAYHE+GHA+VA+ + + P++K TIMPRG +LG LP
Sbjct: 551 KIIMGAEARSRIIQDKDKLLTAYHEAGHALVAYFSPSSMPLYKITIMPRGMSLGSTHFLP 610
Query: 653 SSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMS 712
D S + Q L+ +DV MGG+VAEELI+G D +T+G S+DL SAT A +V+ G S
Sbjct: 611 EMDMVSKNYVQYLSDIDVSMGGKVAEELIYGEDKVTSGISADLASATRTAFTLVTRFGYS 670
Query: 713 DAIGPVHIK---DRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYE 769
+G V + D SSE + I+AEV +L+ EA R +L + +L L AL++YE
Sbjct: 671 KKLGNVDLYANYDSLSSETKQEIEAEVRRLVEEARQRATNILTERRHELELLTKALIKYE 730
Query: 770 TLSAEEIKRIL 780
TL+ EE++++L
Sbjct: 731 TLTKEEMEKVL 741
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 1175 (418.7 bits), Expect = 2.3e-119, P = 2.3e-119
Identities = 241/453 (53%), Positives = 322/453 (71%)
Query: 348 VMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
++ + VK TF DV G D+AK+E+ E+VE+L++P KF RLGGK+P G+LL G PGTGKTL
Sbjct: 145 LLSQDQVKVTFDDVAGVDEAKEEVKELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTL 204
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LAKA+AGEA VPFF +GS+F EMFVGVGA RVR +F AKK+APCIIFIDEIDAVG R
Sbjct: 205 LAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHR 264
Query: 467 KQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 522
GH ++ TL+QLLVEMDGFE EGII+MAATN PD+LDPAL RPGRFDR +VVP
Sbjct: 265 GAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVP 324
Query: 523 NPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
PD++GR+ IL++++ PLA DV IARGTPGF+GADLAN+VN AA+ AA + + +
Sbjct: 325 LPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAARENKKDV 384
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
+ +E E AKD+I+MG ER++M +S++ KKLTAYHE+GHAIV + P++K TI+PRG
Sbjct: 385 SMSEFERAKDKIMMGAERRSMVMSDDEKKLTAYHEAGHAIVGLHMLEHDPVYKVTIIPRG 444
Query: 643 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 702
ALG+ LP D S+++++L +L GGR+AEE+IFG D +TTGAS+D+ ATE+A
Sbjct: 445 RALGVTMFLPEHDRYSMTKRRLECQLAGLFGGRIAEEIIFGPDLVTTGASNDIEKATEIA 504
Query: 703 HYMVSNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRV 747
MV+ G+S +GP+ ++ S ID+EV +++ AY
Sbjct: 505 RNMVTKWGLSQKLGPLTYREEEGEVFLGRSVTQRKDISDATNKEIDSEVRRIVDTAYTTA 564
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
K L++H +QLH +A AL++YET+ +IK IL
Sbjct: 565 KQTLEEHIEQLHLMAKALIKYETIGEAQIKEIL 597
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 1168 (416.2 bits), Expect = 1.3e-118, P = 1.3e-118
Identities = 260/584 (44%), Positives = 364/584 (62%)
Query: 226 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 281
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 282 MVDPKV-----SNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIXXXXXXXXXXXXXX 336
+ DPK+ + + E ++ + W + +I
Sbjct: 72 VQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA 131
Query: 337 XXYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGIL 395
+ + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F +LGGK+PKG+L
Sbjct: 132 MSFGKSKAR--MLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVL 189
Query: 396 LTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIF 455
+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ AKK APCIIF
Sbjct: 190 MVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIF 249
Query: 456 IDEIDAVGSTRKQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTR 511
IDEIDAVG R GH ++ TL+Q+LVEMDGFE NEGII++AATN PD+LDPAL R
Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLR 309
Query: 512 PGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAA 571
PGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+GADLANLVN AA
Sbjct: 310 PGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369
Query: 572 IKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAH 631
+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GHAI+
Sbjct: 370 LFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHD 429
Query: 632 PIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGA 691
P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+I+G +H++TGA
Sbjct: 430 PVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGA 489
Query: 692 SSDLHSATELAHYMVSNCGMSDAIGP---------VHI-----KDRPSSEMQSRI-DAEV 736
S+D+ AT LA MV+ G S+ +GP V + K + S+ +RI D EV
Sbjct: 490 SNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEV 549
Query: 737 VKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
L+ Y+R + LL + LHA+ +AL++YET+ A +I ++
Sbjct: 550 KALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLM 593
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 234/437 (53%), Positives = 319/437 (72%)
Query: 347 EVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
+ + E+ TF DV G ++AK EL ++V++L+NP K+ R +PKGILL G PGTGKTL
Sbjct: 153 KTLVERPNTTFADVMGAEEAKGELQDLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTL 212
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LAK++AGEA V F GSEFEE FVGVGA+RVR LF+AA+K +PCI+FIDEID+VG +R
Sbjct: 213 LAKSLAGEARVSFITINGSEFEEAFVGVGAKRVRELFEAARKNSPCIVFIDEIDSVGGSR 272
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
K+ H + L+QLLVE+DGF+ EG+++MAATN D LD AL R GRFDR I VP PD
Sbjct: 273 TKRVNYHPSEALNQLLVELDGFDGREGVMVMAATNYQDSLDTALIRSGRFDRIIQVPLPD 332
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ R+ I++ YL+DKP+A V+ IA+ TPGF+GADL NLVN AA++ ++T
Sbjct: 333 GKARKSIIDHYLKDKPIASHVNTTTIAQSTPGFSGADLFNLVNWAALETTKHNLPEITME 392
Query: 586 ELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSAL 645
+LE AK+ ++MG ER ++ +S+E++K+ A+HE+GHA+VA T GA +HKATIMPRG AL
Sbjct: 393 QLENAKENLMMGKERHSLLMSDEARKICAFHEAGHALVAIMTPGARTVHKATIMPRGDAL 452
Query: 646 GMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYM 705
G+V+ L +ET V++KQL+A++DV MGGR AEELI G+++I+ GASSD+ AT +A M
Sbjct: 453 GLVSML-EKEETFVTKKQLIAQMDVAMGGRAAEELILGKENISQGASSDIQKATSIAKAM 511
Query: 706 VSNCGMSDAIGPVHIKDRP--SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALAN 763
VSN GMS+ +G ++I+ SS + +D+EV LL +Y R LLKK+ K+ H +AN
Sbjct: 512 VSNYGMSEKVGQIYIQSEKKLSSAQRELVDSEVKSLLDSSYIRATQLLKKYSKEHHLIAN 571
Query: 764 ALLEYETLSAEEIKRIL 780
ALLEYETLS +EIK I+
Sbjct: 572 ALLEYETLSLDEIKDII 588
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 249/567 (43%), Positives = 359/567 (63%)
Query: 234 TEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHV---VMVDPKVSNK 290
+E++ G T + +++++R S + + PG +E L + + V + +
Sbjct: 41 SEFVSAVDEGNVTKVILDGEQIRYRTSDGRDFVTIKPGDAEVTTLLIDKNIPVRAEKQQQ 100
Query: 291 SRFAQELISTILFTVAVGLVWLMGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNKEVMP 350
S F +I+ + F + +G VW+ +Q + + +++
Sbjct: 101 SGFQSFIITLLPFLLLIG-VWVYFMNRMQ----------GGGRGGAMGFGKSKA--KMLT 147
Query: 351 EKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK+ + TF DV G D+AK+EL E+VE+L+NP KF+RLGGK+PKG LL G PGTGKTLLA+
Sbjct: 148 EKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLAR 207
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
AIAGEAGVPFF +GS+F EMFVGVGA RVR +F+ AKK APCI+FIDEIDAVG R
Sbjct: 208 AIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAG 267
Query: 470 EG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
G ++TL+QLLVEMDGFE NEG+I++AATN D+LDPAL RPGRFDR++ V NPD
Sbjct: 268 YGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPD 327
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
++GR++IL ++ + PL DVD++ IARGTPGF+GADLANLVN AA+ AA G +T
Sbjct: 328 IKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTME 387
Query: 586 ELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSAL 645
+ E AKD+++MG ER++M ++++ K+ TAYHE+GHA+V P++KATI+PRG AL
Sbjct: 388 DFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDPVYKATIIPRGGAL 447
Query: 646 GMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYM 705
GMV LP D + + + +L + M G+ AE L +G DH++ G + D+ A++LA M
Sbjct: 448 GMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGPAGDIQQASQLARAM 507
Query: 706 VSNCGMSDAIGPVHIKDRP------------SSEMQSRIDAEVVKLLREAYDRVKALLKK 753
V GMSD +G + + S+ + I+ EV + +++ YD+ A+L +
Sbjct: 508 VMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKRFIQQGYDQAHAILTE 567
Query: 754 HEKQLHALANALLEYETLSAEEIKRIL 780
+ LA LLEYETL+ EEIKR++
Sbjct: 568 RREDWDRLAQGLLEYETLTGEEIKRVM 594
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 249/567 (43%), Positives = 359/567 (63%)
Query: 234 TEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHV---VMVDPKVSNK 290
+E++ G T + +++++R S + + PG +E L + + V + +
Sbjct: 41 SEFVSAVDEGNVTKVILDGEQIRYRTSDGRDFVTIKPGDAEVTTLLIDKNIPVRAEKQQQ 100
Query: 291 SRFAQELISTILFTVAVGLVWLMGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNKEVMP 350
S F +I+ + F + +G VW+ +Q + + +++
Sbjct: 101 SGFQSFIITLLPFLLLIG-VWVYFMNRMQ----------GGGRGGAMGFGKSKA--KMLT 147
Query: 351 EKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK+ + TF DV G D+AK+EL E+VE+L+NP KF+RLGGK+PKG LL G PGTGKTLLA+
Sbjct: 148 EKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLAR 207
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
AIAGEAGVPFF +GS+F EMFVGVGA RVR +F+ AKK APCI+FIDEIDAVG R
Sbjct: 208 AIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAG 267
Query: 470 EG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
G ++TL+QLLVEMDGFE NEG+I++AATN D+LDPAL RPGRFDR++ V NPD
Sbjct: 268 YGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVTVGNPD 327
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
++GR++IL ++ + PL DVD++ IARGTPGF+GADLANLVN AA+ AA G +T
Sbjct: 328 IKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTME 387
Query: 586 ELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSAL 645
+ E AKD+++MG ER++M ++++ K+ TAYHE+GHA+V P++KATI+PRG AL
Sbjct: 388 DFENAKDKVMMGAERRSMVLTQDQKEKTAYHEAGHAVVGLALPMCDPVYKATIIPRGGAL 447
Query: 646 GMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYM 705
GMV LP D + + + +L + M G+ AE L +G DH++ G + D+ A++LA M
Sbjct: 448 GMVVSLPEMDRLNWHRDECQQKLAMTMAGKAAEILKYGEDHVSNGPAGDIQQASQLARAM 507
Query: 706 VSNCGMSDAIGPVHIKDRP------------SSEMQSRIDAEVVKLLREAYDRVKALLKK 753
V GMSD +G + + S+ + I+ EV + +++ YD+ A+L +
Sbjct: 508 VMRWGMSDKVGNIDYAEAHEGYSGNTAGFSVSAHTKELIEEEVKRFIQQGYDQAHAILTE 567
Query: 754 HEKQLHALANALLEYETLSAEEIKRIL 780
+ LA LLEYETL+ EEIKR++
Sbjct: 568 RREDWDRLAQGLLEYETLTGEEIKRVM 594
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 240/449 (53%), Positives = 313/449 (69%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
+EV PE TF DV+G D+AK E+ E+V+YLK+P K++RLGG+LPKG+LL G PGTGKT
Sbjct: 236 QEVNPEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKT 295
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLA+AIAGEA VPFF+ AGSEF+E+ VG GARRVR LF AK +APCIIFIDEID+VGS
Sbjct: 296 LLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSK 355
Query: 466 RKQWEGH--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPN 523
R H +T++QLL EMDGF +NEGII++AATN D LD AL RPGRFD + VP
Sbjct: 356 RVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPK 415
Query: 524 PDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
PD+ GR +I YL + +D K +A+G+ GF GAD+ N+VN AA+KAA D ++T
Sbjct: 416 PDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVEVT 475
Query: 584 ATELEFAKDRILMGTERKTMFI-SEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
L+ A+DR+LMG R I EE+ + TAYHE+GH +V+ T+ A P+HK TI+PRG
Sbjct: 476 MAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTIIPRG 535
Query: 643 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 702
+LG LP D +++ Q+LA LDV MGGRVAEELIFG D +TTGA+ DL AT+LA
Sbjct: 536 QSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKATQLA 595
Query: 703 HYMVSNCGMSDAIG--PVHIKDRPS-----SEMQSR----IDAEVVKLLREAYDRVKALL 751
MV GMSD +G +D S S++ + IDAE+ ++L+E+Y R K +L
Sbjct: 596 VQMVKVFGMSDKVGLRDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYKRAKVIL 655
Query: 752 KKHEKQLHALANALLEYETLSAEEIKRIL 780
+ +K+ LA ALLEYETLSA+E+KR++
Sbjct: 656 ETKKKEHQLLAEALLEYETLSADEVKRVI 684
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 232/453 (51%), Positives = 325/453 (71%)
Query: 348 VMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
+M E +KT F DV GCD+AK+++ E+V+YL++PS+F +LGGK+P G+L+ G PGTGKTL
Sbjct: 145 MMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTL 204
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ AKK +PCIIFIDEIDAVG R
Sbjct: 205 LAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQR 264
Query: 467 KQWEG--HTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 522
G H ++ TL+Q+LVEMDGFE NEGII++AATN PD+LDPAL RPGRFDR +VV
Sbjct: 265 GAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVG 324
Query: 523 NPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
PDVRGR++IL+++++ PLA+DV+ IARGTPGF+GADLANLVN AA+ AA +
Sbjct: 325 LPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNV 384
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
+ E E AKD+I+MG ER++M +SEE K+ TAYHE+GHA+V P++K +I+PRG
Sbjct: 385 SMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRG 444
Query: 643 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 702
ALG+ LP D S+S++ L + + GGR+AEELI+G++ ++TGAS+D+ ATE+A
Sbjct: 445 RALGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIA 504
Query: 703 HYMVSNCGMSDAIGPV-HIKDRPS-----SEMQSR---------IDAEVVKLLREAYDRV 747
MV+ G S+ +GP+ + +D S Q++ ID EV +++ Y+R
Sbjct: 505 RKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERA 564
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
+ ++ + +HA+ +AL++YET+ A +I ++
Sbjct: 565 RQIIMDNMDIMHAMKDALMKYETIDAGQIDDLM 597
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 232/453 (51%), Positives = 325/453 (71%)
Query: 348 VMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
+M E +KT F DV GCD+AK+++ E+V+YL++PS+F +LGGK+P G+L+ G PGTGKTL
Sbjct: 145 MMSEDQIKTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTL 204
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ AKK +PCIIFIDEIDAVG R
Sbjct: 205 LAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQR 264
Query: 467 KQWEG--HTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 522
G H ++ TL+Q+LVEMDGFE NEGII++AATN PD+LDPAL RPGRFDR +VV
Sbjct: 265 GAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVG 324
Query: 523 NPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
PDVRGR++IL+++++ PLA+DV+ IARGTPGF+GADLANLVN AA+ AA +
Sbjct: 325 LPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNV 384
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
+ E E AKD+I+MG ER++M +SEE K+ TAYHE+GHA+V P++K +I+PRG
Sbjct: 385 SMVEFELAKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRG 444
Query: 643 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 702
ALG+ LP D S+S++ L + + GGR+AEELI+G++ ++TGAS+D+ ATE+A
Sbjct: 445 RALGVTMYLPEQDRVSMSKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIA 504
Query: 703 HYMVSNCGMSDAIGPV-HIKDRPS-----SEMQSR---------IDAEVVKLLREAYDRV 747
MV+ G S+ +GP+ + +D S Q++ ID EV +++ Y+R
Sbjct: 505 RKMVTQWGFSEKLGPMLYAEDEGEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERA 564
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
+ ++ + +HA+ +AL++YET+ A +I ++
Sbjct: 565 RQIIMDNMDIMHAMKDALMKYETIDAGQIDDLM 597
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 233/454 (51%), Positives = 319/454 (70%)
Query: 347 EVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
++M E +KT F DV GCD+AK+E+ E+V+YL++P+KF +LGG++P G+L+ G PGTGKT
Sbjct: 145 KLMSEDQIKTTFADVAGCDEAKEEVKELVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKT 204
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKAIAGE+ VPFF +GS+F EMFVGVGA RVR +F+ AKK APCIIFIDEIDAVG
Sbjct: 205 LLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQ 264
Query: 466 RKQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R GH ++ TL+Q+LVEMDGFE NEGII++AATN PD+LD AL RPGRFDR +VV
Sbjct: 265 RGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVV 324
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 581
PDVRGR++IL+++++ PL++DV IARGTPGF+GADLANLVN AA+ AA
Sbjct: 325 GLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNRRV 384
Query: 582 LTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR 641
+ E E AKD+I+MG ER++M +SE K++TAYHE+GHAIV P+HK TI+PR
Sbjct: 385 VGMEEFERAKDKIMMGAERRSMVMSEAEKEMTAYHEAGHAIVGCLVPEHDPVHKVTIIPR 444
Query: 642 GSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 701
G ALG+ LP +D S S+++L +++ V GGR+AEELI+G + ++TGAS D+ AT +
Sbjct: 445 GRALGVTFFLPEADAISQSRRKLESQISVAYGGRLAEELIYGTEKVSTGASQDIKYATSI 504
Query: 702 AHYMVSNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDR 746
A MV+ G SD +GP+ + S E + ID EV + + Y R
Sbjct: 505 ARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSMGKAKAMSDETATLIDTEVKAFIDKNYSR 564
Query: 747 VKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
K +L+ + LH++ +AL++YET+ + +I ++
Sbjct: 565 AKQILQDNVDILHSMKDALMKYETIDSLQIDDLM 598
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
Identities = 228/452 (50%), Positives = 315/452 (69%)
Query: 349 MPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLL 407
+ E+ +KT F DV GCD+AK+++ E+V+YL+ PS+F +LGG++P GILL G PGTGKTLL
Sbjct: 144 LSEEQIKTTFADVAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILLVGQPGTGKTLL 203
Query: 408 AKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK 467
AKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ AKK APCIIFIDEIDAVG R
Sbjct: 204 AKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRG 263
Query: 468 --QWEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPN 523
GH ++ TL+Q+LVEMDGFE NEG+I++AATN PD+LDPAL RPGRFDR + V
Sbjct: 264 AGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVGL 323
Query: 524 PDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
PD+RGR++IL+++++ PL DDV + IARGTPGF+GADLANLVN AA+ AA ++
Sbjct: 324 PDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTARRVVS 383
Query: 584 ATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGS 643
E + AKD+I+MG+ERK+M +SE +++TAYHE+GHAI+ P++K +I+PRG
Sbjct: 384 MKEFDAAKDKIMMGSERKSMVMSESEREMTAYHEAGHAIIGRLVPDHDPVYKVSIIPRGR 443
Query: 644 ALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAH 703
ALG+ LP D S S++ L + + GGRVAEE+I+G D ++TGAS+D+ AT +A
Sbjct: 444 ALGVTMYLPEQDRFSHSKQHLESNISSLYGGRVAEEVIYGSDKVSTGASNDIERATNIAR 503
Query: 704 YMVSNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRVK 748
MV+ G+S+ +GP+ + S E ID E+ ++ Y R +
Sbjct: 504 KMVTQWGLSEKMGPMLFAEEEGEVFLGRTSAKSLHMSDETAKTIDEEIKSVISRNYQRAE 563
Query: 749 ALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
L+K + LHA+ + L++YET+ A +I ++
Sbjct: 564 DLIKANMDVLHAMKDCLMKYETIDALQIDDLM 595
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 235/449 (52%), Positives = 307/449 (68%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 410
EK TF DV G D+ K+EL E+VE+LKNP K+ LG ++PKG+LL G PGTGKTLLA+A
Sbjct: 151 EKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARA 210
Query: 411 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW- 469
IAGEAGVPFF +GS+F EMFVGVGA RVR LF+ AKK APCI+FIDEIDAVG R
Sbjct: 211 IAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGL 270
Query: 470 -EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
GH ++ TL+QLLVEMDGF NEGII++AATN PDILDPAL RPGRFDRHIVV PD+
Sbjct: 271 GGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDI 330
Query: 527 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
GR+EIL+++++ KPL DDVD+ +AR TPGF GADLAN+VN AA+ AA + + E
Sbjct: 331 NGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEE 390
Query: 587 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 646
+E A +R++ G E+K+ ISE K+L AYHE+GHA+V + P+HK +I+PRG A G
Sbjct: 391 MEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISIIPRGRAGG 450
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
LP D + +++ QLL + + +GGRVAE L+ + I+TGA +DL ATE A MV
Sbjct: 451 YTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVL--EDISTGARNDLERATETARRMV 508
Query: 707 SNCGMSDAIGPVHI--------------KDRP-SSEMQSRIDAEVVKLLREAYDRVKALL 751
GMS+ +GP+ +DR S E+ ID EV K++ Y R + +L
Sbjct: 509 MEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKIIDSCYSRAEEIL 568
Query: 752 KKHEKQLHALANALLEYETLSAEEIKRIL 780
KK+ LH +A L+E ET+ EE ++++
Sbjct: 569 KKNINVLHLVATKLMEVETMEGEEFEKLM 597
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 1131 (403.2 bits), Expect = 1.0e-114, P = 1.0e-114
Identities = 235/449 (52%), Positives = 307/449 (68%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 410
EK TF DV G D+ K+EL E+VE+LKNP K+ LG ++PKG+LL G PGTGKTLLA+A
Sbjct: 151 EKKRVTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARA 210
Query: 411 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW- 469
IAGEAGVPFF +GS+F EMFVGVGA RVR LF+ AKK APCI+FIDEIDAVG R
Sbjct: 211 IAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGL 270
Query: 470 -EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
GH ++ TL+QLLVEMDGF NEGII++AATN PDILDPAL RPGRFDRHIVV PD+
Sbjct: 271 GGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDI 330
Query: 527 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
GR+EIL+++++ KPL DDVD+ +AR TPGF GADLAN+VN AA+ AA + + E
Sbjct: 331 NGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEE 390
Query: 587 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 646
+E A +R++ G E+K+ ISE K+L AYHE+GHA+V + P+HK +I+PRG A G
Sbjct: 391 MEEAIERVIAGPEKKSKVISEREKRLVAYHEAGHAMVGYLLPHTDPVHKISIIPRGRAGG 450
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
LP D + +++ QLL + + +GGRVAE L+ + I+TGA +DL ATE A MV
Sbjct: 451 YTLLLPEEDRSYMTKSQLLDEITMLLGGRVAEALVL--EDISTGARNDLERATETARRMV 508
Query: 707 SNCGMSDAIGPVHI--------------KDRP-SSEMQSRIDAEVVKLLREAYDRVKALL 751
GMS+ +GP+ +DR S E+ ID EV K++ Y R + +L
Sbjct: 509 MEYGMSEELGPLTFGKGTEAVFLGRDLARDRNYSEEIAYTIDKEVRKIIDSCYSRAEEIL 568
Query: 752 KKHEKQLHALANALLEYETLSAEEIKRIL 780
KK+ LH +A L+E ET+ EE ++++
Sbjct: 569 KKNINVLHLVATKLMEVETMEGEEFEKLM 597
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
Identities = 225/450 (50%), Positives = 306/450 (68%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 410
+K VK FKDV G D+ KQELVEVVE+LK+P KF LG ++PKG+LL G PGTGKTLLAKA
Sbjct: 155 KKRVK-FKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKA 213
Query: 411 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW- 469
AGEAGVPFF +GS+F EMFVGVGA RVR LF+ AKK APC+IFIDEIDAVG R
Sbjct: 214 CAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGL 273
Query: 470 -EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
GH ++ TL+QLLVEMDGF NEGII++AATN DILDPAL RPGRFDR I V PDV
Sbjct: 274 GGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDV 333
Query: 527 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
GR+ +L+++ ++KPL + V++K+IA TPGF+GADL NL+N AA+ AA +K+ A +
Sbjct: 334 IGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARD 393
Query: 587 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 646
++ A DR++ G +K+ IS++ + + AYHE GH ++ + A +HK TI+PRG A G
Sbjct: 394 IDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQAGG 453
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
LP D ++ +LL ++ +GGRVAEE+IFG ++TGA +D AT +A MV
Sbjct: 454 YAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFGE--VSTGAHNDFQRATNIARRMV 511
Query: 707 SNCGMSDAIGPVHI-----------KD-----RPSSEMQSRIDAEVVKLLREAYDRVKAL 750
+ GMS+ +GP+ +D S ++ ID E+ ++++E Y+R K +
Sbjct: 512 TEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQI 571
Query: 751 LKKHEKQLHALANALLEYETLSAEEIKRIL 780
L ++ +L +A LL+ ETL AE+IK ++
Sbjct: 572 LTENRDKLELIAQTLLKVETLDAEQIKHLI 601
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 221/449 (49%), Positives = 303/449 (67%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 410
EK F+DV G D+ KQELVEVVE+LK+P KF +G ++PKG+LL G PGTGKTLLA+A
Sbjct: 155 EKKKVRFRDVAGADEEKQELVEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARA 214
Query: 411 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW- 469
+AGEAGVPFF +GS+F EMFVGVGA RVR LF+ AKK APCIIFIDEIDAVG R
Sbjct: 215 VAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGL 274
Query: 470 -EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
GH ++ TL+QLLVEMDGF NEGII++AATN PDILDPAL RPGRFDR I V PDV
Sbjct: 275 GGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDV 334
Query: 527 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
GR+ +L+++ ++KPL ++++++AIA TPGF+GADL NL+N AA+ AA +K+ ++
Sbjct: 335 NGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSD 394
Query: 587 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 646
++ A DR++ G +K+ ISE+ + + A+HE+GH ++ + A +HK TI+PRG A G
Sbjct: 395 IDEATDRVIAGPAKKSRVISEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIVPRGQAGG 454
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
LP D +++ +LL ++ +GGRVAEE++FG ++TGA +D AT +A MV
Sbjct: 455 YAVMLPKEDRYFMTKPELLDKITGLLGGRVAEEIVFGE--VSTGAHNDFQRATGIARRMV 512
Query: 707 SNCGMSDAIGPV----------------HIKDRPSSEMQSRIDAEVVKLLREAYDRVKAL 750
+ GMSD +GP+ H + S + ID E+ +++E Y R K +
Sbjct: 513 TEFGMSDKLGPMQFGSSQGGQVFLGRDFHSEQNYSDAIAHEIDMEMQTIMKECYARAKQI 572
Query: 751 LKKHEKQLHALANALLEYETLSAEEIKRI 779
L + +L +A LLE ETL AE+I +
Sbjct: 573 LTDNRDKLDLIAKTLLEVETLDAEQINHL 601
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 229/455 (50%), Positives = 299/455 (65%)
Query: 346 KEVMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGK 404
K P VK TF DV G ++ K EL E+V+YL++P KF R+GGK+PKG+LL G PGTGK
Sbjct: 162 KMYTPSAKVKVTFDDVAGMENPKMELKEIVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGK 221
Query: 405 TLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGS 464
TLLA+A+AGEA V F + S+F EMFVGVGA RVR LF AKK AP IIFIDE+DAVG
Sbjct: 222 TLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGR 281
Query: 465 TRKQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIV 520
+R GH ++ TL+QLL EMDGF+ ++ +I+MAATN PD+LDPAL RPGRFDRH+V
Sbjct: 282 SRGAGLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVV 341
Query: 521 VPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGE 580
+ PD R R++IL ++ + PL DVD+ IARGTPG GADL NLVN AAI AA +
Sbjct: 342 IDRPDWRDREKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAA 401
Query: 581 KLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMP 640
+T +E AKD++LMG ERK MFI+E+ K++TAYHE+GH IVA G P+HK TI+P
Sbjct: 402 TVTMEHMERAKDKVLMGGERK-MFITEQEKRITAYHEAGHTIVAKLLPGTDPVHKVTIIP 460
Query: 641 RGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATE 700
RG ALG+ QLP D + L+ RL V +GGR AE +FG D ++TGA +DL +
Sbjct: 461 RGQALGVTQQLPEDDRYHYPKSYLMNRLSVALGGRQAERAVFG-D-LSTGAQNDLKMVND 518
Query: 701 LAHYMVSNCGMSDAIGPVHI---KDRP------------SSEMQSRIDAEVVKLLREAYD 745
LA MV GMSD IG + ++ P S +M ID E+ +++EA
Sbjct: 519 LAEKMVCQWGMSDKIGAMTFSRGEEHPFLGRKLAEEKTFSEQMAWLIDQEIAAIIKEAEQ 578
Query: 746 RVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
+ ++ + +L AL +AL+E ETL + I +L
Sbjct: 579 KADNVIANNRGKLDALVDALMEEETLDGKRIDEVL 613
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 226/450 (50%), Positives = 303/450 (67%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 410
+K TF +V G D+AKQE+ EVVE+LK+ KF LG ++PKGILL G PGTGKTLLAKA
Sbjct: 152 DKPTITFANVAGVDEAKQEVGEVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKA 211
Query: 411 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW- 469
IAGEAGVPFF +GSEF EMFVGVGA RVR LF AKK APCIIFIDEIDAVG R
Sbjct: 212 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAGL 271
Query: 470 -EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
GH ++ TL+Q+LVEMDGF+ + +I++AATN PDILDPAL RPGRFDR +V+ PD+
Sbjct: 272 GGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDI 331
Query: 527 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
GR+ IL+++ + KPLAD V+++ +A+ T GF+GADLANL+N AAI AA + + +
Sbjct: 332 TGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETED 391
Query: 587 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 646
LE + DR++ G ERK+ IS + K++TAYHE+GH +V +GA P+HK +I+ RG LG
Sbjct: 392 LEESIDRVIAGPERKSRRISTQEKEVTAYHETGHGLVLRLVQGADPVHKISIVARGMTLG 451
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
QLP+ D +++ Q A + + G VAEEL F ++TGAS DL AT++AH MV
Sbjct: 452 HTRQLPNEDRYLMTRSQFKAMMAGLLAGYVAEELTF--KELSTGASDDLRRATDIAHKMV 509
Query: 707 SNCGMSDAIGPVHI--KD------RPSSEMQS-------RIDAEVVKLLREAYDRVKALL 751
++ GMSD +GP K+ R SE + ID EV L+ EA+ + K +L
Sbjct: 510 TSYGMSDKLGPRTFGNKEEMVFLGREISEQKDYGEKVADMIDEEVRGLIEEAHQKAKTIL 569
Query: 752 KKHEKQLHALANALLEYETLSAEEIKRILL 781
+++ +L +A L E ETL E++ + +
Sbjct: 570 TENKNRLKFIAEKLFEKETLEGAELENLFV 599
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 1003 (358.1 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 212/437 (48%), Positives = 285/437 (65%)
Query: 349 MPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 408
M K F DV G D+AK+EL EVV +LK P +FT +G K+PKG+LL G PGTGKTLLA
Sbjct: 163 MDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLA 222
Query: 409 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ 468
KAIAGEAGVPFF +GSEF EMFVGVGA RVR LF+ AK+ APC+IFIDEIDAVG R
Sbjct: 223 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGA 282
Query: 469 WEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
G ++TL+QLL EMDGFE N GII++AATN PD+LD AL RPGRFDR ++V P
Sbjct: 283 GIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAP 342
Query: 525 DVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 584
D GR+EILE++ ++K LA +V + +IAR TPGF+GADLANL+N AAI A +T
Sbjct: 343 DYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITL 402
Query: 585 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 644
E++ A DR++ G E T + +SK+L AYHE GHAIV + P+ K T++PRG A
Sbjct: 403 LEIDDAVDRVVAGMEG-TPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQA 461
Query: 645 LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHY 704
G+ P+ ++ ++ QL+AR+ MGGR AEE +FG D +TTGA DL TE+A
Sbjct: 462 QGLTWFTPNEEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQ 521
Query: 705 MVSNCGMSDAIGPVHIKDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANA 764
MV+ GMS+ +GP+ ++ + E R+ A +++ +Q H +A
Sbjct: 522 MVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARK 580
Query: 765 LLEYETLSAEEIKRILL 781
+++ + + + +L+
Sbjct: 581 IVQEQREVVDRLVDLLI 597
Score = 659 (237.0 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 141/325 (43%), Positives = 208/325 (64%)
Query: 474 KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEIL 533
++TL+QLL EMDGFE N GII++AATN PD+LD AL RPGRFDR ++V PD GR+EIL
Sbjct: 292 EQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEIL 351
Query: 534 ELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDR 593
E++ ++K LA +V + +IAR TPGF+GADLANL+N AAI A +T E++ A DR
Sbjct: 352 EVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDR 411
Query: 594 ILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPS 653
++ G E T + +SK+L AYHE GHAIV + P+ K T++PRG A G+ P+
Sbjct: 412 VVAGMEG-TPLVDSKSKRLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPN 470
Query: 654 SDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSD 713
++ ++ QL+AR+ MGGR AEE +FG D +TTGA DL TE+A MV+ GMS+
Sbjct: 471 EEQGLTTKAQLMARIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMVTRFGMSN 530
Query: 714 AIGPVHIK-------------DRP--SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQL 758
+GP+ ++ +R S E+ +RIDA+V +L + + + ++++ + +
Sbjct: 531 -LGPISLESSGGEVFLGGGLMNRSEYSEEVATRIDAQVRQLAEQGHQMARKIVQEQREVV 589
Query: 759 HALANALLEYETLSAEEIKRILLPY 783
L + L+E ET+ EE ++I+ Y
Sbjct: 590 DRLVDLLIEKETIDGEEFRQIVAEY 614
Score = 38 (18.4 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 245 PTTLPALLQELQHRASRNTNEPFLNPGV 272
PT P L+ L+ R + P N G+
Sbjct: 89 PTNAPELIARLRDSNIRLDSHPVRNNGM 116
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
Identities = 223/457 (48%), Positives = 298/457 (65%)
Query: 342 KELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPG 401
K+L+K+ MP+ TF DV G D+A +EL E+ ++L+NPS++ LG K+PKG+LL G PG
Sbjct: 151 KQLSKD-MPKT---TFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPG 206
Query: 402 TGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDA 461
TGKTLLA+A+AGEAGVPFF +GS+F EMFVGVGA RVR LF+ AK+ +PCIIF+DEIDA
Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA 266
Query: 462 VGSTRKQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDR 517
VG R GH ++ TL+QLLVEMDGF G+IL+AATN PDILDPAL RPGRFDR
Sbjct: 267 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDR 326
Query: 518 HIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVD 577
I V NPD+ GR+ +L ++ + KP+A D D+ +A+ T G GADLAN++N AA+ A +
Sbjct: 327 QIPVSNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARE 386
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
G +T LE A DR++ G RK ISE+ KK+TAYHE GH + A+ PI+K T
Sbjct: 387 NGTVITGPALEEAVDRVIGGPRRKGRIISEQEKKITAYHEGGHTLAAWAMPDIEPIYKVT 446
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
I+ RG G +P D+ ++ +++A+L MGGR AEEL+F R+ TTGA SD+
Sbjct: 447 ILARGRTGGHAVAVPEEDKGLRTRSEMIAQLVFAMGGRAAEELVF-REP-TTGAVSDIEQ 504
Query: 698 ATELAHYMVSNCGMSDAIGPV-----H--------IKDRP--SSEMQSRIDAEVVKLLRE 742
AT++A MV+ GMS +G V H + +P S E+ ID EV KL+
Sbjct: 505 ATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREIDEEVRKLIEA 564
Query: 743 AYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRI 779
A+ +L ++ L LA LLE ETL E++ I
Sbjct: 565 AHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESI 601
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 237/551 (43%), Positives = 329/551 (59%)
Query: 241 QSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEK--QPLHVVMVDPKVSNKSRFAQELI 298
++G + A+ EL +R R + PG+S++ Q L +D N AQE
Sbjct: 113 ENGTIAIVEAVSPELGNRVERVRVQL---PGLSQELLQKLRAKNIDFAAHN----AQEDQ 165
Query: 299 STILFTVAVGLVW---LMGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKNVK 355
++LF + L + L+G L + + ++ P V
Sbjct: 166 GSVLFNLIGNLAFPALLIGGLFLLSRRSGGGMGGPGGPGNPLQFGQSKAKFQMEPNTGV- 224
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TF DV G D+AKQ+ +EVVE+LK P +FT +G K+PKG+LL G PGTGKTLLAKAIAGEA
Sbjct: 225 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEA 284
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 471
GVPFF +GSEF EMFVGVGA RVR LF+ AK+ APCI+F+DEIDAVG R G
Sbjct: 285 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGND 344
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+QLL EMDGFE N G+I++AATN DILD AL RPGRFDR + V PDV+GR +
Sbjct: 345 EREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTD 404
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++ +K +DV ++ IA TPGF+GADLANL+N AAI A +++ E++ +
Sbjct: 405 ILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSI 464
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
DRI+ G E T+ +SK L AYHE GHA+ T G + K T++PRG A G+ +
Sbjct: 465 DRIVAGMEG-TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQARGLTWFI 523
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
PS D T +S++QL AR+ +GGR AEE+IFG +TTGA DL T LA MV+ GM
Sbjct: 524 PSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQMVTTFGM 583
Query: 712 SDAIGPVHIKDRPS-SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYET 770
SD IGP + D + S++ R+ A + A D + + +KK + +A + ++
Sbjct: 584 SD-IGPWSLMDSSAQSDVIMRMMARNSMSEKLAED-IDSAVKKLSDSAYEIALSHIKNNR 641
Query: 771 LSAEEIKRILL 781
+ +++ +LL
Sbjct: 642 EAMDKLVEVLL 652
Score = 618 (222.6 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 142/322 (44%), Positives = 196/322 (60%)
Query: 474 KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEIL 533
++TL+QLL EMDGFE N G+I++AATN DILD AL RPGRFDR + V PDV+GR +IL
Sbjct: 347 EQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDIL 406
Query: 534 ELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDR 593
+++ +K +DV ++ IA TPGF+GADLANL+N AAI A +++ E++ + DR
Sbjct: 407 KVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDR 466
Query: 594 ILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPS 653
I+ G E T+ +SK L AYHE GHA+ T G + K T++PRG A G+ +PS
Sbjct: 467 IVAGMEG-TVMTDGKSKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQARGLTWFIPS 525
Query: 654 SDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSD 713
D T +S++QL AR+ +GGR AEE+IFG +TTGA DL T LA MV+ GMSD
Sbjct: 526 DDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQMVTTFGMSD 585
Query: 714 AIGPVHIKDRPSSE-----MQSR----------IDAEVVKLLREAYDRVKALLKKHEKQL 758
IGP + D + M +R ID+ V KL AY+ + +K + + +
Sbjct: 586 -IGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAM 644
Query: 759 HALANALLEYETLSAEEIKRIL 780
L LLE ET+ +E + IL
Sbjct: 645 DKLVEVLLEKETIGGDEFRAIL 666
Score = 40 (19.1 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 395 LLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEE 429
+L G G G KA A E GV + S F E
Sbjct: 65 ILLGNAGVGLVASGKANADEQGVSSSRMSYSRFLE 99
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 961 (343.3 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 208/458 (45%), Positives = 299/458 (65%)
Query: 342 KELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAP 400
K K+ E +VK FKDV G +AKQE++E V++L+NP K+ +LG K+P+G +L+G P
Sbjct: 356 KSTAKKFNQETDVKIKFKDVAGMAEAKQEVMEFVKFLQNPEKYEKLGAKIPRGAILSGPP 415
Query: 401 GTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEID 460
GTGKTLLAKA AGEAGVPF+ +GSEF EMFVGVGA RVR LF+ A++ AP I+F+DEID
Sbjct: 416 GTGKTLLAKATAGEAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEID 475
Query: 461 AVGSTRKQWEG-----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
A+G R + + TL+QLLVEMDGF+ ++ ++++A TN PDILD AL RPGRF
Sbjct: 476 AIGKQRSKGNATGANDERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRF 535
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKA---IARGTPGFNGADLANLVNIAAI 572
DRH+ + NP++ GR+EI +++LQ L D+D +A TPGF+GAD+AN+ N AA+
Sbjct: 536 DRHVHIDNPELLGRKEIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAAL 595
Query: 573 KAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHP 632
AA E +T E A +R++ G E+K+ ++ E +K+ AYHE+GHAI + + AHP
Sbjct: 596 IAARYNAEFVTLRHFELAIERVIGGVEKKSKLLNPEEQKIVAYHEAGHAICGWYLKYAHP 655
Query: 633 IHKATIMPRGS-ALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGA 691
+ K +I+PRG ALG LP D+ +S QL R+ + +GGRV+EEL F +T+GA
Sbjct: 656 LLKVSIIPRGQGALGYAQYLPP-DQYLMSTLQLYDRMIMTLGGRVSEELHFAS--VTSGA 712
Query: 692 SSDLHSATELAHYMVSNCGMSDAIGPVHIKD--------RPSSEMQSRI-DAEVVKLLRE 742
D T +A MV GMS +G V+ D +P S+ SRI D+EV +++ +
Sbjct: 713 HDDFKKVTGIAQSMVLRFGMSKTVGMVNYYDTRSQDDLTKPFSDETSRIIDSEVQRIVSD 772
Query: 743 AYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
Y + K LL + K++ +A LL+ E ++ E++ R+L
Sbjct: 773 CYQKCKQLLTEKSKEVELVAQELLKKEFITREDMIRLL 810
Score = 42 (19.8 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 6/24 (25%), Positives = 16/24 (66%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVV 374
++ K F+++KG + +LV+++
Sbjct: 6 DEKCKEFEEIKGVNTLYPDLVDII 29
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
Identities = 217/426 (50%), Positives = 280/426 (65%)
Query: 347 EVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
++ P V TF DV G D+AKQ+ +EVVE+LK P +FT +G ++PKG+LL G PGTGKTL
Sbjct: 210 QMEPNTGV-TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTL 268
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LAKAIAGEAGVPFF +GSEF EMFVGVGA RVR LF+ AK+ APCI+F+DEIDAVG R
Sbjct: 269 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQR 328
Query: 467 KQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 522
G ++TL+QLL EMDGFE N G+I++AATN DILD AL RPGRFDR + V
Sbjct: 329 GTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVD 388
Query: 523 NPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
PDV+GR +IL+++ +K V ++ IA TPGF+GADLANL+N AAI A G +
Sbjct: 389 VPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAI 448
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
++ E++ + DRI+ G E T+ +SK L AYHE GHAI T G + K T++PRG
Sbjct: 449 SSKEIDDSIDRIVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRG 507
Query: 643 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 702
A G+ +PS D T +S++QL AR+ +GGR AEE+IFG +TTGA SDL T LA
Sbjct: 508 QARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLA 567
Query: 703 HYMVSNCGMSDAIGPVHIKDRPS-SEMQSRIDAE---VVKLLREAYDRVKALLKK-HEKQ 757
MV+ GMS+ IGP + D S++ R+ A KL + VK L K +E
Sbjct: 568 KQMVTTFGMSE-IGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTLSDKAYEIA 626
Query: 758 LHALAN 763
L + N
Sbjct: 627 LSQIRN 632
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 140/322 (43%), Positives = 196/322 (60%)
Query: 474 KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEIL 533
++TL+QLL EMDGFE N G+I++AATN DILD AL RPGRFDR + V PDV+GR +IL
Sbjct: 340 EQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDIL 399
Query: 534 ELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDR 593
+++ +K V ++ IA TPGF+GADLANL+N AAI A G +++ E++ + DR
Sbjct: 400 KVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDR 459
Query: 594 ILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPS 653
I+ G E T+ +SK L AYHE GHAI T G + K T++PRG A G+ +PS
Sbjct: 460 IVAGMEG-TVMTDGKSKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARGLTWFIPS 518
Query: 654 SDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSD 713
D T +S++QL AR+ +GGR AEE+IFG +TTGA SDL T LA MV+ GMS+
Sbjct: 519 DDPTLISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAKQMVTTFGMSE 578
Query: 714 AIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQL 758
IGP + D S ++ + ID V L +AY+ + ++ + + +
Sbjct: 579 -IGPWSLMDSSEQSDVIMRMMARNSMSEKLANDIDTAVKTLSDKAYEIALSQIRNNREAM 637
Query: 759 HALANALLEYETLSAEEIKRIL 780
+ LLE ET+S +E + IL
Sbjct: 638 DKIVEILLEKETMSGDEFRAIL 659
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 208/450 (46%), Positives = 295/450 (65%)
Query: 351 EKNVKT--FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 408
EK+ T F DV G +AK E+ E V +LKNP KF +G K+P+G +L G PGTGKTL+A
Sbjct: 293 EKSTSTVKFSDVAGLGEAKVEIEEFVNFLKNPKKFHDIGAKIPRGAILVGPPGTGKTLIA 352
Query: 409 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ 468
KA AGEA VPF+ +GS+F EMFVGVG RVR LF+ A+K APCI+FIDEIDAVG R +
Sbjct: 353 KATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRARGK 412
Query: 469 --WEGHT---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPN 523
+ G + TL+QLLVEMDGF+ + ++++AATN PDILD AL RPGRFDR I + N
Sbjct: 413 GGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQITIDN 472
Query: 524 PDVRGRQEILELYLQDKPLADDVD-VKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
PD++ R+EI ++L L ++ + +++ TPGF+GAD+AN+ N AA+ AA E +
Sbjct: 473 PDLKSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARRHAEII 532
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
T + A DR++ G E+K +S K+ AYHE+GHA+V++ + HP+ K +I+PRG
Sbjct: 533 TLEHFDAAVDRVIGGLEKKNKVLSPTEKRTVAYHEAGHAVVSWFLKHCHPLLKVSIVPRG 592
Query: 643 -SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 701
+ALG LP ++ +Q+Q+ + + +GGRVAE+L FG ITTGA DL T++
Sbjct: 593 VAALGYAQYLPK-EQFLQNQEQIFDMMCMALGGRVAEQLTFGT--ITTGAQDDLEKITKM 649
Query: 702 AHYMVSNCGMSDAIGPVHIKD--------RPSSEMQSRI-DAEVVKLLREAYDRVKALLK 752
A+ VS GM++ IGP+ + +P SE + + D EV KLL+ AYDR +L+
Sbjct: 650 AYSQVSIYGMNEKIGPLSYQKGQDGSDLTKPYSEETAEVMDEEVRKLLKSAYDRTTQVLQ 709
Query: 753 KHEKQLHALANALLEYETLSAEEIKRILLP 782
+H + L ++AN LLE E + EE++ +L P
Sbjct: 710 EHREGLISVANLLLEKEVIHFEEVEAVLGP 739
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 203/448 (45%), Positives = 292/448 (65%)
Query: 351 EKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E ++K F DV G D+AK+E++E V++LKNP + RLG K+P+G +L+G PGTGKTLLAK
Sbjct: 288 ETDIKIKFADVAGVDEAKEEIMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAK 347
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-- 467
A AGEA VPF +GSEF EMFVGVG RVR LF A+K APCIIFIDEIDA+G R
Sbjct: 348 ATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRG 407
Query: 468 -QWEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
Q+ + ++ TL+QLLVEMDGF +E I++ A TN PD+LDPAL RPGRFDR I + P
Sbjct: 408 GQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRP 467
Query: 525 DVRGRQEILELYLQDKPLADDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
D+ GR++I +++L+ AD++D+ K +A T GF GAD+ N+ N A+ AA ++
Sbjct: 468 DIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEV 527
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
E A +R+ G E+K+ +S E K A+HE+GHA+ + E P+ K +I+PR
Sbjct: 528 QMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPRA 587
Query: 643 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 702
ALG + LP D+ +S+ Q+L ++ + + GRV+EE+ FG + IT+GAS D T +A
Sbjct: 588 QALGYASYLPK-DQYLMSRGQILDQMGMALAGRVSEEIFFGPEKITSGASDDFQKVTRMA 646
Query: 703 HYMVSNCGMSDAIG----PVHIKD---RPSSEMQSR-IDAEVVKLLREAYDRVKALLKKH 754
V+ GMS +G P+ ++ +P SE ++ ID E+ KL++ AY+R K LL +H
Sbjct: 647 QAYVTQYGMSPTVGTIAYPIDTRETVQKPFSEATAQMIDEEIRKLVKHAYERTKKLLLEH 706
Query: 755 EKQLHALANALLEYETLSAEEIKRILLP 782
++ L +A LL+ E ++ E++ IL P
Sbjct: 707 KQGLENIAQRLLQKEVITYNEVETILGP 734
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
Identities = 206/452 (45%), Positives = 300/452 (66%)
Query: 346 KEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGK 404
K+ E +VK FKDV GCD+AK+E++E V +LK PS++ ++G K+P+G +L+G PGTGK
Sbjct: 335 KKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGK 394
Query: 405 TLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGS 464
TLLAKA AGEAGVPF++ +GSEF EMFVGVGA RVR LF+ A++ AP I+FIDEIDA+G
Sbjct: 395 TLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGK 454
Query: 465 TRKQ--WEG---HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHI 519
R++ + G + TL+Q+LVEMDGF + ++++A TN PDILD AL RPGRFDRHI
Sbjct: 455 ARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHI 514
Query: 520 VVPNPDVRGRQEILELYLQDKPLADDV-DVK-AIARGTPGFNGADLANLVNIAAIKAAVD 577
+ P++ GR+ I ++L LA ++ D+K +A TPGF+GAD+AN+ N AA+ AA
Sbjct: 515 NIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARS 574
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+ + E A +R++ G ERK+ +S E KK+ AYHE+GHA+ + + A P+ K +
Sbjct: 575 DEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVS 634
Query: 638 IMPRGS-ALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLH 696
I+PRG ALG LP D ++++QL R+ + +GGRV+EEL F +T+GAS D
Sbjct: 635 IIPRGQGALGYAQYLPG-DIFLLTEQQLKDRMTMSLGGRVSEELHF--PSVTSGASDDFK 691
Query: 697 SATELAHYMVSNCGMSDAIGPVHIKDRPSSEMQSR--------IDAEVVKLLREAYDRVK 748
T +A MV+ GMSD IG V+ + R S++ ID+EV ++++E +DR
Sbjct: 692 KVTSMATAMVTELGMSDKIGWVNYQKRDDSDLTKPFSDETGDIIDSEVYRIVQECHDRCT 751
Query: 749 ALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
LLK+ + + +A LL+ E L+ E++ +L
Sbjct: 752 KLLKEKAEDVEKIAQVLLKKEVLTREDMIDLL 783
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 963 (344.1 bits), Expect = 6.6e-97, P = 6.6e-97
Identities = 201/379 (53%), Positives = 260/379 (68%)
Query: 349 MPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 408
+PE V TF DV G D AK EL EVV++LKNP K+T LG K+PKG LL G PGTGKTLLA
Sbjct: 242 VPETGV-TFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLA 300
Query: 409 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ 468
+A+AGEAGVPFF A SEF E+FVGVGA RVR LF+ AK KAPCI+FIDEIDAVG R
Sbjct: 301 RAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGA 360
Query: 469 WEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
G ++T++QLL EMDGF N G+I++AATN PD+LD AL RPGRFDR + V P
Sbjct: 361 GMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 420
Query: 525 DVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 584
DV GR +IL+++ + K + DVD + +AR TPGF GADL NL+N AAI AA ++++
Sbjct: 421 DVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISK 480
Query: 585 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 644
E+ A +RI+ G E+K +SEE K+L AYHE+GHA+V P+ K +I+PRG A
Sbjct: 481 DEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQA 540
Query: 645 LGMVTQLPSSD--ETSV-SQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 701
G+ PS + E+ + S+ L ++ V +GGRVAEE+IFG +++TTGAS+D + +
Sbjct: 541 GGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRV 600
Query: 702 AHYMVSNCGMSDAIGPVHI 720
A MV G S IG V +
Sbjct: 601 ARQMVERFGFSKKIGQVAV 619
Score = 180 (68.4 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 49/137 (35%), Positives = 72/137 (52%)
Query: 660 SQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVH 719
S+ L ++ V +GGRVAEE+IFG +++TTGAS+D + +A MV G S IG V
Sbjct: 559 SRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVA 618
Query: 720 IKD---RP--SSEMQSR----------IDAEVVKLLREAYDRVKALLKKHEKQLHALANA 764
+ P M S+ +DAEV +L+ +AY R K ++ LH LA
Sbjct: 619 VGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQL 678
Query: 765 LLEYETLSAEEIKRILL 781
L+E ET+ EE + +
Sbjct: 679 LIEKETVDGEEFMSLFI 695
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 211/455 (46%), Positives = 290/455 (63%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
K + E +VK FKDV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKT
Sbjct: 296 KVLKDEIDVK-FKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKT 354
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA AGEA VPF +GSEF EMFVGVG RVR LF A+K APCI+FIDEIDAVG
Sbjct: 355 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 414
Query: 466 RKQ--WEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + + G +++ TL+QLLVEMDGF ++++A TN PDILDPAL RPGRFDR I +
Sbjct: 415 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 474
Query: 522 PNPDVRGRQEILELYLQ----DKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVD 577
PD++GR I +++L+ D L D + +A TPGF+GAD+AN+ N AA+ AA
Sbjct: 475 GPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARH 534
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+ + E A +R++ G E+KT + E KK AYHE+GHA+ + E A P+ K +
Sbjct: 535 LSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVS 594
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
I+PRG LG LP ++ +++QLL R+ + +GGRV+EE+ FGR ITTGA DL
Sbjct: 595 IIPRGKGLGYAQYLPK-EQYLYTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRK 651
Query: 698 ATELAHYMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRV 747
T+ A+ + GM++ +G + + ++P SE +R ID EV L+ EAY R
Sbjct: 652 VTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISEAYKRT 711
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
ALL + + + +A LLE E L ++ +L P
Sbjct: 712 VALLTEKKADVEKVALLLLEKEVLDKNDMVELLGP 746
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 960 (343.0 bits), Expect = 1.4e-96, P = 1.4e-96
Identities = 210/453 (46%), Positives = 291/453 (64%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
K + E +VK FKDV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKT
Sbjct: 292 KVLRDEIDVK-FKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKT 350
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA AGEA VPF GSEF EMFVGVG RVR LF A+K APCI+FIDEIDAVG
Sbjct: 351 LLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRK 410
Query: 466 RKQ--WEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + + G +++ TL+QLLVEMDGF ++++A TN PDILDPAL RPGRFDR I +
Sbjct: 411 RGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYI 470
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARG----TPGFNGADLANLVNIAAIKAAVD 577
PD++GR I +++L+ L ++D +A+AR TPGF+GAD+AN+ N AA+ AA
Sbjct: 471 GPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARH 530
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+ + E A +R++ G E+KT + E KK AYHE+GHA+ + E A P+ K +
Sbjct: 531 LSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVS 590
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
I+PRG LG LP ++ +++QLL R+ + +GGRV+EE+ FGR ITTGA DL
Sbjct: 591 IIPRGKGLGYAQYLPK-EQYLYTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLKK 647
Query: 698 ATELAHYMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRV 747
T+ A+ + GM++ +G V + ++P SE +R ID EV L+ AY+R
Sbjct: 648 VTQSAYAQIVQFGMNEKVGQVSFDLPRQGELVLEKPYSEATARLIDTEVRNLISTAYERT 707
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
+ LL + ++ +A LLE E L ++ +L
Sbjct: 708 QQLLSDKKPEVEKVALRLLEKEVLDKNDMVELL 740
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 200/379 (52%), Positives = 259/379 (68%)
Query: 349 MPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 408
+PE V +F DV G D AK EL EVV++LKNP K+T LG K+PKG LL G PGTGKTLLA
Sbjct: 254 VPETGV-SFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLA 312
Query: 409 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ 468
+A+AGEAGVPFF A SEF E+FVGVGA RVR LF+ AK KAPCI+FIDEIDAVG R
Sbjct: 313 RAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGA 372
Query: 469 WEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
G ++T++QLL EMDGF N G+I++AATN PD+LD AL RPGRFDR + V P
Sbjct: 373 GMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRP 432
Query: 525 DVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 584
DV GR +IL+++ + K L DVD +AR TPGF GADL NL+N AAI AA ++++
Sbjct: 433 DVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARRELKEISK 492
Query: 585 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 644
E+ A +RI+ G E+K +SEE K+L AYHE+GHA+V P+ K +I+PRG A
Sbjct: 493 DEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQA 552
Query: 645 LGMVTQLPSSD--ETSV-SQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 701
G+ PS + E+ + S+ L ++ V +GGRVAEE+IFG +++TTGAS+D + +
Sbjct: 553 GGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRV 612
Query: 702 AHYMVSNCGMSDAIGPVHI 720
A M+ G S IG V +
Sbjct: 613 ARQMIERFGFSKKIGQVAV 631
Score = 185 (70.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 48/137 (35%), Positives = 73/137 (53%)
Query: 660 SQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVH 719
S+ L ++ V +GGRVAEE+IFG +++TTGAS+D + +A M+ G S IG V
Sbjct: 571 SRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVA 630
Query: 720 IKD---RP--SSEMQSR----------IDAEVVKLLREAYDRVKALLKKHEKQLHALANA 764
+ P +M S+ +DAEV +L+ +AY R ++ H LH LA
Sbjct: 631 VGGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQL 690
Query: 765 LLEYETLSAEEIKRILL 781
L+E ET+ EE + +
Sbjct: 691 LIEKETVDGEEFMSLFI 707
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 959 (342.6 bits), Expect = 1.8e-96, P = 1.8e-96
Identities = 210/455 (46%), Positives = 290/455 (63%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
K + E +VK FKDV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKT
Sbjct: 297 KVLKDEIDVK-FKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKT 355
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA AGEA VPF +GSEF EMFVGVG RVR LF A+K APCI+FIDEIDAVG
Sbjct: 356 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 415
Query: 466 RKQ--WEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + + G +++ TL+QLLVEMDGF ++++A TN PDILDPAL RPGRFDR I +
Sbjct: 416 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 475
Query: 522 PNPDVRGRQEILELYLQ----DKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVD 577
PD++GR I +++L+ D L D + +A TPGF+GAD+AN+ N AA+ AA
Sbjct: 476 GPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARH 535
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+ + E A +R++ G E+KT + E KK AYHE+GHA+ + E A P+ K +
Sbjct: 536 LSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVS 595
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
I+PRG LG LP ++ +++QLL R+ + +GGRV+EE+ FGR ITTGA DL
Sbjct: 596 IIPRGKGLGYAQYLPK-EQYLYTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRK 652
Query: 698 ATELAHYMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRV 747
T+ A+ + GM++ +G + + ++P SE +R ID EV L+ +AY R
Sbjct: 653 VTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRT 712
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
ALL + + + +A LLE E L ++ +L P
Sbjct: 713 VALLTEKKADVEKVALLLLEKEVLDKNDMVELLGP 747
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 207/442 (46%), Positives = 289/442 (65%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
FKDV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKTLLAKA AGEA
Sbjct: 327 FKDVAGCEEAKIEIMEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN 386
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--KQWEGHTK 474
VPF +GSEF EMFVGVG RVR +F A+K APCI+FIDEIDAVG R K + GH++
Sbjct: 387 VPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFGGHSE 446
Query: 475 K--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 532
+ TL+QLLVEMDGF ++++AATN DILD AL RPGRFDR I VP PD++GR I
Sbjct: 447 QENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASI 506
Query: 533 LELYLQD-KPLADDVDV-KAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+++L + K D ++ + +A TPGF GAD+AN+ N AA+ AA D + + E A
Sbjct: 507 FKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQA 566
Query: 591 KDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQ 650
+R++ G E+KT ++ E K+ A+HE+GHA+ + E A P+ K +I+PRG LG
Sbjct: 567 IERVIAGMEKKTNVLAPEEKRTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGKGLGYAQY 626
Query: 651 LPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCG 710
LP D +S++QL R+ + +GGRVAEEL F R ITTGA DL T++A+ V G
Sbjct: 627 LPK-DHYLLSKEQLFDRMCMTLGGRVAEELFFNR--ITTGAQDDLKKITDIAYSQVVRFG 683
Query: 711 MSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRVKALLKKHEKQLHA 760
M++ +G V + +P SE ++ ID EV +++ A++ +LL KH++ +
Sbjct: 684 MNEKVGQVSFDVGQAGDPVFSKPYSEDTAQLIDNEVRSIIKCAHEATTSLLTKHKENVQK 743
Query: 761 LANALLEYETLSAEEIKRILLP 782
+A LL+ E LS +++ +L P
Sbjct: 744 VAERLLQNEVLSRDDMIELLGP 765
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 210/455 (46%), Positives = 291/455 (63%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
K + E +VK FKDV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKT
Sbjct: 296 KVLKDEIDVK-FKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKT 354
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA AGEA VPF +GSEF EMFVGVG RVR LF A+K APCI+FIDEIDAVG
Sbjct: 355 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 414
Query: 466 RKQ--WEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + + G +++ TL+QLLVEMDGF ++++A TN PDILDPAL RPGRFDR I +
Sbjct: 415 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 474
Query: 522 PNPDVRGRQEILELYLQ----DKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVD 577
PD++GR I +++L+ D L D + +A TPGF+GAD+AN+ N AA+ AA
Sbjct: 475 GPPDIKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARH 534
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+ + E A +R++ G E+KT + E KK AYHE+GHA+ + E A P+ K +
Sbjct: 535 LSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVS 594
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
I+PRG LG LP ++ +++QLL R+ + +GGRV+EE+ FGR ITTGA DL
Sbjct: 595 IIPRGKGLGYAQYLPK-EQYLYTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRK 651
Query: 698 ATELAHYMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRV 747
T+ A+ + GM++ +G + + ++P SE +R ID EV L+ +AY R
Sbjct: 652 VTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDDEVRILISDAYRRT 711
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
ALL + + + +A LLE E L ++ ++L P
Sbjct: 712 VALLTEKKADVEKVALLLLEKEVLDKNDMVQLLGP 746
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
Identities = 209/455 (45%), Positives = 291/455 (63%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
K + E +VK FKDV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKT
Sbjct: 298 KVLKDEIDVK-FKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKT 356
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA AGEA VPF +GSEF EMFVGVG RVR LF A+K APCI+FIDEIDAVG
Sbjct: 357 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 416
Query: 466 RKQ--WEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + + G +++ TL+QLLVEMDGF ++++A TN PDILDPAL RPGRFDR I +
Sbjct: 417 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFI 476
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARG----TPGFNGADLANLVNIAAIKAAVD 577
PD++GR I +++L+ L ++ + +AR TPGF+GAD+AN+ N AA+ AA
Sbjct: 477 GPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARH 536
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+ + E A +R++ G E+KT + E KK AYHE+GHA+ + E A P+ K +
Sbjct: 537 LSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVS 596
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
I+PRG LG LP ++ +++QLL R+ + +GGRV+EE+ FGR ITTGA DL
Sbjct: 597 IIPRGKGLGYAQYLPR-EQYLYTREQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRK 653
Query: 698 ATELAHYMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRV 747
T+ A+ + GM++ +G + + ++P SE +R ID EV L+ +AY R
Sbjct: 654 VTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRT 713
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
ALL + + + +A LLE E L ++ +L P
Sbjct: 714 VALLTEKKADVEKVALLLLEKEVLDKNDMVELLGP 748
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
Identities = 209/455 (45%), Positives = 291/455 (63%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
K + E +VK FKDV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKT
Sbjct: 298 KVLKDEIDVK-FKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKT 356
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA AGEA VPF +GSEF EMFVGVG RVR LF A+K APCI+FIDEIDAVG
Sbjct: 357 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 416
Query: 466 RKQ--WEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + + G +++ TL+QLLVEMDGF ++++A TN PDILDPAL RPGRFDR I +
Sbjct: 417 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFI 476
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARG----TPGFNGADLANLVNIAAIKAAVD 577
PD++GR I +++L+ L ++ + +AR TPGF+GAD+AN+ N AA+ AA
Sbjct: 477 GPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARH 536
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+ + E A +R++ G E+KT + E KK AYHE+GHA+ + E A P+ K +
Sbjct: 537 LSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVS 596
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
I+PRG LG LP ++ +++QLL R+ + +GGRV+EE+ FGR ITTGA DL
Sbjct: 597 IIPRGKGLGYAQYLPK-EQYLYTKEQLLDRMCMTLGGRVSEEIFFGR--ITTGAQDDLRK 653
Query: 698 ATELAHYMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRV 747
T+ A+ + GM++ +G + + ++P SE +R ID EV L+ +AY R
Sbjct: 654 VTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRT 713
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
ALL + + + +A LLE E L ++ +L P
Sbjct: 714 VALLTEKKADVEKVALLLLEKEVLDKNDMVELLGP 748
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 209/455 (45%), Positives = 290/455 (63%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
K + E +VK FKDV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKT
Sbjct: 297 KVLKDEIDVK-FKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKT 355
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA AGEA VPF GSEF EMFVGVG RVR LF A+K APCI+FIDEIDAVG
Sbjct: 356 LLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 415
Query: 466 RKQ--WEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + + G +++ TL+QLLVEMDGF ++++A TN PDILDPAL RPGRFDR I +
Sbjct: 416 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYI 475
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARG----TPGFNGADLANLVNIAAIKAAVD 577
PD++GR I +++L+ L +D +AR TPGF+GAD+AN+ N AA+ AA
Sbjct: 476 GPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARH 535
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+ + E A +R++ G E+KT + E KK AYHE+GHA+ + E A P+ K +
Sbjct: 536 LSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVS 595
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
I+PRG LG LP ++ +++QLL R+ + +GGRV+E++ FGR ITTGA DL
Sbjct: 596 IIPRGKGLGYAQYLPK-EQYLYTKEQLLDRMCMTLGGRVSEQIFFGR--ITTGAQDDLKK 652
Query: 698 ATELAHYMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRV 747
T+ A+ + GM++ +G + + ++P SE +R ID EV L+ AYDR
Sbjct: 653 VTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDEEVRSLINIAYDRT 712
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
+LL + + ++ +A LLE E L ++ +L P
Sbjct: 713 LSLLTEKKAEVEKVALRLLEKEVLDKSDMVDLLGP 747
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 209/455 (45%), Positives = 290/455 (63%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
K + E +VK FKDV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKT
Sbjct: 141 KVLKDEIDVK-FKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKT 199
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA AGEA VPF GSEF EMFVGVG RVR LF A+K APCI+FIDEIDAVG
Sbjct: 200 LLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 259
Query: 466 RKQ--WEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + + G +++ TL+QLLVEMDGF ++++A TN PDILDPAL RPGRFDR I +
Sbjct: 260 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYI 319
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARG----TPGFNGADLANLVNIAAIKAAVD 577
PD++GR I +++L+ L +D +AR TPGF+GAD+AN+ N AA+ AA
Sbjct: 320 GPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARH 379
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+ + E A +R++ G E+KT + E KK AYHE+GHA+ + E A P+ K +
Sbjct: 380 LSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHADPLLKVS 439
Query: 638 IMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHS 697
I+PRG LG LP ++ +++QLL R+ + +GGRV+E++ FGR ITTGA DL
Sbjct: 440 IIPRGKGLGYAQYLPK-EQYLYTKEQLLDRMCMTLGGRVSEQIFFGR--ITTGAQDDLKK 496
Query: 698 ATELAHYMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRV 747
T+ A+ + GM++ +G + + ++P SE +R ID EV L+ AYDR
Sbjct: 497 VTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARMIDEEVRSLINIAYDRT 556
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
+LL + + ++ +A LLE E L ++ +L P
Sbjct: 557 LSLLTEKKAEVEKVALRLLEKEVLDKSDMVDLLGP 591
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 199/420 (47%), Positives = 283/420 (67%)
Query: 345 NKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGK 404
NK V P F+++ G D++K EL+EVV+++KN K+ +G ++PKG+LL G PG+GK
Sbjct: 137 NK-VSPHFKPIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGK 195
Query: 405 TLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGS 464
T+LA+A+A EA VP+ Y +G EF E++VG GA+R+R LF A+ AP I+FIDEIDA+G
Sbjct: 196 TMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGG 255
Query: 465 TRKQWE----GHTK--KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRH 518
R G + +TL+QLLVEMDGF I+++ ATN D LD AL RPGRFDR
Sbjct: 256 KRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRI 315
Query: 519 IVVPNPDVRGRQEILELYLQDKPLADDV---DVKAIARGTPGFNGADLANLVNIAAIKAA 575
+ VP PD+ GR++ILE+Y+ K + D+ D++ IAR TPGF+GADL N+VN A I A
Sbjct: 316 VYVPLPDINGRKKILEIYI--KKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILAT 373
Query: 576 VDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEG-AHPIH 634
+ +T EL A+D++ MG ERK++ S+ +++TAYHE+GHAIVA+ + PIH
Sbjct: 374 RNNKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIH 433
Query: 635 KATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSD 694
KATI+ RG+ALG V Q+P D + + Q+ A+L VCMGGR AEE++FG+ ++GASSD
Sbjct: 434 KATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSD 493
Query: 695 LHSATELAHYMVSNCGMSDAIGPVHIKDRPSSEMQS-RIDAEVVKLLREAYDRVKALLKK 753
+ ATE+A+ MV+ GMSD +GP++ K R S R+ A+ V + VK+L++K
Sbjct: 494 ISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEV---EVKSLVEK 550
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 155/333 (46%), Positives = 219/333 (65%)
Query: 463 GSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 522
GS + +TL+QLLVEMDGF I+++ ATN D LD AL RPGRFDR + VP
Sbjct: 260 GSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVP 319
Query: 523 NPDVRGRQEILELYLQDKPLADDV---DVKAIARGTPGFNGADLANLVNIAAIKAAVDGG 579
PD+ GR++ILE+Y+ K + D+ D++ IAR TPGF+GADL N+VN A I A +
Sbjct: 320 LPDINGRKKILEIYI--KKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNK 377
Query: 580 EKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEG-AHPIHKATI 638
+T EL A+D++ MG ERK++ S+ +++TAYHE+GHAIVA+ + PIHKATI
Sbjct: 378 SLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATI 437
Query: 639 MPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSA 698
+ RG+ALG V Q+P D + + Q+ A+L VCMGGR AEE++FG+ ++GASSD+ A
Sbjct: 438 ISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRA 497
Query: 699 TELAHYMVSNCGMSDAIGPVHIK---------DRPSSEMQSRIDAEVVKLLREAYDRVKA 749
TE+A+ MV+ GMSD +GP++ K +R S++ S I+ EV L+ + +
Sbjct: 498 TEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSLSEE 557
Query: 750 LLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
+L++H K+L LA ALL+ ETLS EEIK I+ P
Sbjct: 558 ILRRHRKELDNLAFALLDKETLSGEEIKNIIDP 590
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 199/420 (47%), Positives = 283/420 (67%)
Query: 345 NKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGK 404
NK V P F+++ G D++K EL+EVV+++KN K+ +G ++PKG+LL G PG+GK
Sbjct: 137 NK-VSPHFKPIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGK 195
Query: 405 TLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGS 464
T+LA+A+A EA VP+ Y +G EF E++VG GA+R+R LF A+ AP I+FIDEIDA+G
Sbjct: 196 TMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGG 255
Query: 465 TRKQWE----GHTK--KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRH 518
R G + +TL+QLLVEMDGF I+++ ATN D LD AL RPGRFDR
Sbjct: 256 KRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRI 315
Query: 519 IVVPNPDVRGRQEILELYLQDKPLADDV---DVKAIARGTPGFNGADLANLVNIAAIKAA 575
+ VP PD+ GR++ILE+Y+ K + D+ D++ IAR TPGF+GADL N+VN A I A
Sbjct: 316 VYVPLPDINGRKKILEIYI--KKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILAT 373
Query: 576 VDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEG-AHPIH 634
+ +T EL A+D++ MG ERK++ S+ +++TAYHE+GHAIVA+ + PIH
Sbjct: 374 RNNKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIH 433
Query: 635 KATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSD 694
KATI+ RG+ALG V Q+P D + + Q+ A+L VCMGGR AEE++FG+ ++GASSD
Sbjct: 434 KATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSD 493
Query: 695 LHSATELAHYMVSNCGMSDAIGPVHIKDRPSSEMQS-RIDAEVVKLLREAYDRVKALLKK 753
+ ATE+A+ MV+ GMSD +GP++ K R S R+ A+ V + VK+L++K
Sbjct: 494 ISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEV---EVKSLVEK 550
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 155/333 (46%), Positives = 219/333 (65%)
Query: 463 GSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 522
GS + +TL+QLLVEMDGF I+++ ATN D LD AL RPGRFDR + VP
Sbjct: 260 GSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVP 319
Query: 523 NPDVRGRQEILELYLQDKPLADDV---DVKAIARGTPGFNGADLANLVNIAAIKAAVDGG 579
PD+ GR++ILE+Y+ K + D+ D++ IAR TPGF+GADL N+VN A I A +
Sbjct: 320 LPDINGRKKILEIYI--KKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNK 377
Query: 580 EKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEG-AHPIHKATI 638
+T EL A+D++ MG ERK++ S+ +++TAYHE+GHAIVA+ + PIHKATI
Sbjct: 378 SLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATI 437
Query: 639 MPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSA 698
+ RG+ALG V Q+P D + + Q+ A+L VCMGGR AEE++FG+ ++GASSD+ A
Sbjct: 438 ISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIVFGKSETSSGASSDISRA 497
Query: 699 TELAHYMVSNCGMSDAIGPVHIK---------DRPSSEMQSRIDAEVVKLLREAYDRVKA 749
TE+A+ MV+ GMSD +GP++ K +R S++ S I+ EV L+ + +
Sbjct: 498 TEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSLSEE 557
Query: 750 LLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
+L++H K+L LA ALL+ ETLS EEIK I+ P
Sbjct: 558 ILRRHRKELDNLAFALLDKETLSGEEIKNIIDP 590
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 203/450 (45%), Positives = 294/450 (65%)
Query: 351 EKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E +VK F DV G D+AK E++E V +LK+P +F +LG K+P+G +L+G PGTGKTLLAK
Sbjct: 394 ETDVKIKFSDVAGMDEAKVEIMEFVSFLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAK 453
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--K 467
A AGE+GVPFF +GSEF EMFVGVG RVR LF A+K PCIIFIDEIDA+G +R K
Sbjct: 454 ATAGESGVPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIFIDEIDAIGKSRSAK 513
Query: 468 QWEG---HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
+ G + TL+Q+L EMDGF ++ ++++A TN PD+LD AL RPGRFDRHI + P
Sbjct: 514 NFSGGNDERESTLNQILTEMDGFNTSDQVVVLAGTNRPDVLDKALMRPGRFDRHISIDRP 573
Query: 525 DVRGRQEILELYLQDKPLADDVDVKA--IARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
+ GR++I ++L+ +D+D ++ TPGF GAD+AN VN AA+ AA + E +
Sbjct: 574 TMDGRKQIFRVHLKKIVTKEDMDYLTGRLSALTPGFAGADIANCVNEAALVAARENAESV 633
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
T E A +R++ G E+K++ +S E K+ AYHE+GHAI + A P+ K +I+PRG
Sbjct: 634 TMKHFERAIERVVGGLEKKSLVLSPEEKRTVAYHEAGHAICGWYFRWADPLLKVSIIPRG 693
Query: 643 S-ALGMVTQLPSSDETSV-SQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATE 700
ALG LP++ +T + + Q++ R+ + +GGRV+EEL F D +T+GAS D + T
Sbjct: 694 QGALGYAQYLPANGDTYLMTANQMMDRMAMTLGGRVSEELHF--DTVTSGASDDFNKVTR 751
Query: 701 LAHYMVSNCGMSDAIGPVHIKDRPSSEMQSR--------IDAEVVKLLREAYDRVKALLK 752
LA MV+ GMS + ++ ++ PSS++ ID EV +++ EAY + + LL
Sbjct: 752 LATAMVTKFGMSPKLKYIYYEEDPSSQLHKPFSEETAKDIDIEVRRIVNEAYKQCRDLLT 811
Query: 753 KHEKQLHALANALLEYETLSAEEIKRILLP 782
+K++ +A LL E LS +++ R+L P
Sbjct: 812 AKKKEVGLVAEELLAKEVLSRDDMVRLLGP 841
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 211/450 (46%), Positives = 289/450 (64%)
Query: 348 VMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
V+ +++K F DV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKTL
Sbjct: 282 VINREDIKVKFADVAGCEEAKIEIMEFVNFLKNPQQYKDLGAKIPKGAILTGPPGTGKTL 341
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LAKA AGEA VPF +GSEF EMFVGVG RVR +F A+K +PCI+FIDEIDAVG R
Sbjct: 342 LAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKR 401
Query: 467 KQ---WEGHTKK--TLHQLLVEMDGFEQNEG-IILMAATNLPDILDPALTRPGRFDRHIV 520
GH+++ TL+QLLVEMDGF +E +I++AATN DILD AL RPGRFDR I
Sbjct: 402 GGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIY 461
Query: 521 VPNPDVRGRQEILELYLQDKPLADDVDVKAIARG----TPGFNGADLANLVNIAAIKAAV 576
VP PD++GR I ++L PL +D ++R TPGF+GAD++N+ N AA+ AA
Sbjct: 462 VPVPDIKGRASIFRVHLG--PLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAALIAAR 519
Query: 577 DGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKA 636
D +++ E A +R++ G E+KT + +E KK AYHE+GHAI + + A P+ K
Sbjct: 520 DANHEISNKHFEQAIERVVAGMEKKTQVLQKEEKKTVAYHEAGHAIAGWFLQHADPLLKV 579
Query: 637 TIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLH 696
+I+PRG LG LP ++ S+ QLL R+ + +GGRVAEE+ FGR ITTGA DL
Sbjct: 580 SIIPRGKGLGYAQYLPK-EQYLYSKDQLLDRMCMTLGGRVAEEIFFGR--ITTGAQDDLQ 636
Query: 697 SATELAHYMVSNCGMSDAIGPVHIK---------DRPSSEMQSR-IDAEVVKLLREAYDR 746
T++A+ V GMS+ +GP+ + D+P SE ++ ID EV L+ A R
Sbjct: 637 KVTQMAYSQVVKFGMSEKVGPLSFETPAPGEMAFDKPYSEATAQLIDQEVRDLVMNALRR 696
Query: 747 VKALLKKHEKQLHALANALLEYETLSAEEI 776
+ LL + + +A LLE E L+ E++
Sbjct: 697 TRDLLLEKRSDIERVALRLLEKEILNREDM 726
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 204/445 (45%), Positives = 288/445 (64%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KN FKDV GCD+AKQE++E V +LKNP K+ LG K+PKG LL G PGTGKTLLAKA
Sbjct: 316 KNKIYFKDVAGCDEAKQEIMEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKAT 375
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE- 470
AGE+GVPF +GS+F EMFVGVG RVR LFQ A++ AP IIFIDEIDA+G R +
Sbjct: 376 AGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDAIGRARGRGGL 435
Query: 471 -GHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVR 527
G+ ++ TL+QLLVEMDGF G++++A TN PDILD AL RPGRFDR I + PD++
Sbjct: 436 GGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIK 495
Query: 528 GRQEILELYLQDKPLADDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
GR +I ++YL+ L + + +A TPGF GAD+AN+ N AA+ AA G +T
Sbjct: 496 GRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMA 555
Query: 586 ELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA- 644
E A DR++ G E+K IS+ ++ AYHESGHA+V + E A P+ K TI+PRG+A
Sbjct: 556 HFESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAA 615
Query: 645 LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHY 704
LG +P+ + ++++QL + +GGR AE+++ G+ I+TGA +DL T++ +
Sbjct: 616 LGFAQYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLIGK--ISTGAQNDLEKVTKMTYA 672
Query: 705 MVSNCGMSDAIGPVHIKDR--------P-SSEMQSRIDAEVVKLLREAYDRVKALLKKHE 755
V+ G SD +G + R P S++ + ID EV + +AY+R L+++H+
Sbjct: 673 QVAVYGFSDKVGLLSFPPRDDGYDFSKPYSNKTGAIIDEEVRDWVAKAYERTVELVEEHK 732
Query: 756 KQLHALANALLEYETLSAEEIKRIL 780
++ +A LLE E L +++ +IL
Sbjct: 733 VKVAEIAELLLEKEVLHQDDLLKIL 757
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 196/442 (44%), Positives = 284/442 (64%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TFKDV G D+AK+E++E V +LK+PS++ +LG ++PKG +L+G PGTGKTLLAKA AGEA
Sbjct: 352 TFKDVAGMDEAKEEIMEFVSFLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGEA 411
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-- 473
GV F+ +GS+F EMFVGVG RVR LF+ A+ PCI+FIDEIDAVG R + H
Sbjct: 412 GVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEIDAVGRARSRGGFHNDE 471
Query: 474 -KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 532
+ TL+QLLVEMDGF G+++ A TN D+LDPAL RPGRFDR I V PD++GR++I
Sbjct: 472 RENTLNQLLVEMDGFSSTSGVVVFAGTNRSDVLDPALLRPGRFDRQIYVGKPDIKGRKDI 531
Query: 533 LELYLQDKPLADDVD--VKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
++L++ L +++ K +A TPGF+GAD+AN+ N A+ AA E A
Sbjct: 532 FMVHLKNIKLDGEMEEIAKKLATLTPGFSGADIANVCNEGALVAARKDATSANFDHFEEA 591
Query: 591 KDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA-LGMVT 649
+R+L+G +R+ +S E + + A+HE+GHA+V + E P+ K +I+PRGS LG
Sbjct: 592 IERVLVGLKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTDPLLKVSIVPRGSGTLGFAQ 651
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
P D+ +++QL R+ V +GGR+AE +IF D I+TGA DL T++A V N
Sbjct: 652 YQPK-DQYLYTREQLFDRICVSLGGRIAESIIF--DRISTGAMDDLDKVTKMASASVVNY 708
Query: 710 GMSDAIGPVHIKD--------RPSSEMQSR-IDAEVVKLLREAYDRVKALLKKHEKQLHA 760
GMS+ +G + +P S+ +R ID E+ +++ +AY + LL + ++ L
Sbjct: 709 GMSEKVGVASFRKEGDDITVVKPYSQATARMIDEEIRRMVNDAYSKTTQLLHEKKELLIK 768
Query: 761 LANALLEYETLSAEEIKRILLP 782
LA LLE E + ++++ IL P
Sbjct: 769 LATILLEKEVIQRDDLRTILGP 790
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 203/446 (45%), Positives = 279/446 (62%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F DV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKTLLAKA AGEA
Sbjct: 299 FADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAN 358
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT--- 473
VPF GSEF EMFVGVG RVR +F A+K APCI+FIDEIDA+G RK+ GH
Sbjct: 359 VPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIG--RKRGRGHLGGQ 416
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
+ TL+Q+LVEMDGF + ++++A TN PDILDPALTRPGRFDR I + PD++GR
Sbjct: 417 SEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRS 476
Query: 531 EILELYLQ----DKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
I +++L+ D L+ D + +A TPGF GAD++N+ N AA+ AA +
Sbjct: 477 SIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERH 536
Query: 587 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 646
E A +R++ G E+KT + K AYHE+GHA+V + E A P+ K +I+PRG LG
Sbjct: 537 FEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLG 596
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
LP ++ +++QL R+ + +GGRVAE+L FG+ ITTGA DL T+ A+ +
Sbjct: 597 YAQYLPR-EQFLYTREQLFDRMCMMLGGRVAEQLFFGQ--ITTGAQDDLRKVTQSAYAQI 653
Query: 707 SNCGMSDAIGPVHIK---------DRPSSEMQSR-IDAEVVKLLREAYDRVKALLKKHEK 756
GMS+ +G V ++P SE ++ ID EV L+R AY+R LL + +
Sbjct: 654 VQFGMSEKLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCRE 713
Query: 757 QLHALANALLEYETLSAEEIKRILLP 782
Q+ + LLE E L ++ +L P
Sbjct: 714 QVEKVGRRLLEKEVLEKADMIELLGP 739
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 201/444 (45%), Positives = 286/444 (64%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KN FKDV GC++AKQE++E V +L+NP K+ LG K+PKG LL G PGTGKTLLAKA
Sbjct: 321 KNKIYFKDVAGCEEAKQEIMEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKAT 380
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ--W 469
AGE+ VPF +GS+F EMFVGVG RVR+LFQ A++ AP IIFIDEIDA+G R + +
Sbjct: 381 AGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGF 440
Query: 470 EG---HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
G + TL+QLLVEMDGF G++++A TN PDILD AL RPGRFDR I + PD+
Sbjct: 441 SGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDI 500
Query: 527 RGRQEILELYLQDKPLADDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 584
+GR +I ++YL+ L + + +A TPGF GAD+AN+ N AA+ AA G +T
Sbjct: 501 KGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTM 560
Query: 585 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 644
+ A DR++ G E+K IS+ ++ AYHESGHA+ + E A P+ K TI+PRG+A
Sbjct: 561 AHFDSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTA 620
Query: 645 -LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAH 703
LG +P+ + ++++QL + +GGR AE+++ GR I+TGA +DL T++ +
Sbjct: 621 ALGFAQYVPN-ENLLMTKEQLFDMTCMTLGGRAAEQVLIGR--ISTGAQNDLEKVTKMTY 677
Query: 704 YMVSNCGMSDAIGPVHIKDR------P-SSEMQSRIDAEVVKLLREAYDRVKALLKKHEK 756
V+ G SD IG + R P S+ + ID EV + + +AY R L+++H++
Sbjct: 678 AQVAVYGFSDKIGLLSFPQREDEFSKPYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKE 737
Query: 757 QLHALANALLEYETLSAEEIKRIL 780
Q+ +A LLE E L +++ ++L
Sbjct: 738 QVAQIAELLLEKEVLHQDDLTKVL 761
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 203/446 (45%), Positives = 278/446 (62%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F DV GC++AK E++E V +LKNP ++ LG K+PKG +LTG PGTGKTLLAKA AGEA
Sbjct: 271 FADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAK 330
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT--- 473
VPF GSEF EMFVGVG RVR +F A+K APCI+FIDEIDA+G RK+ GH
Sbjct: 331 VPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIG--RKRGRGHLGGQ 388
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
+ TL+Q+LVEMDGF ++++A TN PDILDPALTRPGRFDR I + PD++GR
Sbjct: 389 SEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRS 448
Query: 531 EILELYLQ----DKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
I +++L+ D+ L D + +A TPGF GAD++N+ N AA+ AA +
Sbjct: 449 SIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERH 508
Query: 587 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 646
E A +R++ G E+KT + K AYHE+GHA+V + E A P+ K +I+PRG LG
Sbjct: 509 FEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLG 568
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
LP ++ +++QL R+ + +GGRVAE+L FG+ ITTGA DL T+ A+ +
Sbjct: 569 YAQYLPR-EQYLYTREQLFDRMCMMLGGRVAEQLFFGQ--ITTGAQDDLRKVTQSAYAQI 625
Query: 707 SNCGMSDAIGPVHIK---------DRPSSEMQSR-IDAEVVKLLREAYDRVKALLKKHEK 756
GMS+ +G V ++P SE ++ ID EV L+R AY+R LL + +
Sbjct: 626 VQFGMSEKLGQVSFDFPRQGETMVEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCRE 685
Query: 757 QLHALANALLEYETLSAEEIKRILLP 782
Q+ + LLE E L ++ +L P
Sbjct: 686 QVEKVGRRLLEKEVLEKADMIELLGP 711
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 581 (209.6 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 115/206 (55%), Positives = 153/206 (74%)
Query: 351 EKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E VK FKDV GCD++K+E++E V++L++P K+ +LG K+P+G +L+G PGTGKTLLAK
Sbjct: 279 ENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAK 338
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
A AGEAGVPF +GSEF EMFVGVGA RVR LF+ A++ AP IIF+DEIDA+G R
Sbjct: 339 ATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNG 398
Query: 470 E--GHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
G+ ++ TL+QLLVEMDGF+ + ++++A TN PDILD AL RPGRFDRHI + PD
Sbjct: 399 RMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPD 458
Query: 526 VRGRQEILELYLQDKPL--ADDVDVK 549
V GR++I +++L L D+D K
Sbjct: 459 VEGRKQIFKVHLNKLKLKSVQDIDAK 484
Score = 351 (128.6 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 94/273 (34%), Positives = 148/273 (54%)
Query: 525 DVRGRQEILELYLQDKPLADDVDVKA--IARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
D+ +Q+ ++ + ++++ A +A TPGF GAD+AN N A+ AA + +
Sbjct: 480 DIDAKQKDVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
E A +R++ G E+K+ +S E KK AYHE+GHAI + + A P+ K +I+PRG
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRG 599
Query: 643 S-ALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 701
ALG LP D+ SQ+Q R+ + +GGRV+EEL F D +T+GAS D T++
Sbjct: 600 QGALGYAQYLPK-DQYLTSQEQFKHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQM 656
Query: 702 AHYMVSNCGMSDAIGPVHI---KDRPS--------SEMQSRI-DAEVVKLLREAYDRVKA 749
A M+ GMSD +G + D + SE +RI D EV +L+ E+Y+
Sbjct: 657 AQQMILKLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHK 716
Query: 750 LLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
LL + + +A L + E L+ E++ +I P
Sbjct: 717 LLTEKLDLVDKVAEELFKKEVLTREDMIKICGP 749
Score = 42 (19.8 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 242 SGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQELISTI 301
SG P T LL + + PFL+ SE + V + +V + + A+E+ I
Sbjct: 326 SGPPGTGKTLLAKA---TAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAI 382
Query: 302 LF 303
+F
Sbjct: 383 IF 384
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 581 (209.6 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 115/206 (55%), Positives = 153/206 (74%)
Query: 351 EKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E VK FKDV GCD++K+E++E V++L++P K+ +LG K+P+G +L+G PGTGKTLLAK
Sbjct: 279 ENEVKIKFKDVAGCDESKEEIMEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAK 338
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
A AGEAGVPF +GSEF EMFVGVGA RVR LF+ A++ AP IIF+DEIDA+G R
Sbjct: 339 ATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKERGNG 398
Query: 470 E--GHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
G+ ++ TL+QLLVEMDGF+ + ++++A TN PDILD AL RPGRFDRHI + PD
Sbjct: 399 RMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISIDVPD 458
Query: 526 VRGRQEILELYLQDKPL--ADDVDVK 549
V GR++I +++L L D+D K
Sbjct: 459 VEGRKQIFKVHLNKLKLKSVQDIDAK 484
Score = 351 (128.6 bits), Expect = 1.5e-91, Sum P(2) = 1.5e-91
Identities = 94/273 (34%), Positives = 148/273 (54%)
Query: 525 DVRGRQEILELYLQDKPLADDVDVKA--IARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
D+ +Q+ ++ + ++++ A +A TPGF GAD+AN N A+ AA + +
Sbjct: 480 DIDAKQKDVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAV 539
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
E A +R++ G E+K+ +S E KK AYHE+GHAI + + A P+ K +I+PRG
Sbjct: 540 DTYHFEQAIERVIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIPRG 599
Query: 643 S-ALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 701
ALG LP D+ SQ+Q R+ + +GGRV+EEL F D +T+GAS D T++
Sbjct: 600 QGALGYAQYLPK-DQYLTSQEQFKHRMIMTLGGRVSEELHF--DTVTSGASDDFKKITQM 656
Query: 702 AHYMVSNCGMSDAIGPVHI---KDRPS--------SEMQSRI-DAEVVKLLREAYDRVKA 749
A M+ GMSD +G + D + SE +RI D EV +L+ E+Y+
Sbjct: 657 AQQMILKLGMSDKLGQICYDTSSDNGNGFKVHHNYSETTARIIDEEVKRLIDESYEACHK 716
Query: 750 LLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
LL + + +A L + E L+ E++ +I P
Sbjct: 717 LLTEKLDLVDKVAEELFKKEVLTREDMIKICGP 749
Score = 42 (19.8 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 242 SGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQELISTI 301
SG P T LL + + PFL+ SE + V + +V + + A+E+ I
Sbjct: 326 SGPPGTGKTLLAKA---TAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAI 382
Query: 302 LF 303
+F
Sbjct: 383 IF 384
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 191/427 (44%), Positives = 279/427 (65%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
K V EK F DV G ++AK+E+ E+V++LK P ++ +LG K+PKG+LL G PGTGKT
Sbjct: 166 KLVNSEKPKVKFSDVAGVEEAKEEVKEIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGKT 225
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA+AGEA VPFF +GS F EMFVGVGA RVR LF+ AKK+AP I+FIDEIDA+G +
Sbjct: 226 LLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKS 285
Query: 466 RK---QWEGHTKK--TLHQLLVEMDGF-EQNEGIILMAATNLPDILDPALTRPGRFDRHI 519
R G+ ++ TL+QLL EMDGF ++ +I++AATN P++LD AL RPGRFDR +
Sbjct: 286 RAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQV 345
Query: 520 VVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGG 579
+V PD +GR +IL+++++D ++ V V+ IAR T G GADLAN++N AA+ A D
Sbjct: 346 LVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSK 405
Query: 580 EKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIM 639
+ + +L A +R + G E+K+ I+E+ KK+ YHE GHA++A T+GA + K +++
Sbjct: 406 KYVEQNDLVEAVERAIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKRVSKVSVI 465
Query: 640 PRG-SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSA 698
PRG +ALG P ++ + + +L+A +DV +GGR AEE+ G I+TGAS+DL A
Sbjct: 466 PRGLAALGYTLNTPEENKFLMQKHELIAEVDVLLGGRAAEEVFIGE--ISTGASNDLERA 523
Query: 699 TELAHYMVSNCGMSDAIGPVHIKDRPSSEMQS--RIDAEVVKLLREAYDRVKALLKKHEK 756
T++ M+S GMS+ G + ++ + ++ + I K+ D VK L + K
Sbjct: 524 TDIIKAMISMYGMSEIAGLMVLEKQRNTFLSGGQTIKDYSEKMAESLDDYVKKTLDERYK 583
Query: 757 QLHALAN 763
+ N
Sbjct: 584 DVKDTLN 590
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 126/322 (39%), Positives = 197/322 (61%)
Query: 474 KKTLHQLLVEMDGF-EQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 532
++TL+QLL EMDGF ++ +I++AATN P++LD AL RPGRFDR ++V PD +GR +I
Sbjct: 299 EQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQVLVDKPDFKGRCDI 358
Query: 533 LELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 592
L+++++D ++ V V+ IAR T G GADLAN++N AA+ A D + + +L A +
Sbjct: 359 LKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSKKYVEQNDLVEAVE 418
Query: 593 RILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG-SALGMVTQL 651
R + G E+K+ I+E+ KK+ YHE GHA++A T+GA + K +++PRG +ALG
Sbjct: 419 RAIAGLEKKSRRINEKEKKIVTYHECGHALIAETTKGAKRVSKVSVIPRGLAALGYTLNT 478
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P ++ + + +L+A +DV +GGR AEE+ G I+TGAS+DL AT++ M+S GM
Sbjct: 479 PEENKFLMQKHELIAEVDVLLGGRAAEEVFIGE--ISTGASNDLERATDIIKAMISMYGM 536
Query: 712 SDAIGPVHI-KDRP------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQL 758
S+ G + + K R S +M +D V K L E Y VK L ++ +
Sbjct: 537 SEIAGLMVLEKQRNTFLSGGQTIKDYSEKMAESLDDYVKKTLDERYKDVKDTLNTYKGAI 596
Query: 759 HALANALLEYETLSAEEIKRIL 780
+ AL E ET+ +++ I+
Sbjct: 597 ETMVAALYEEETIEGNKVREII 618
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 891 (318.7 bits), Expect = 2.8e-89, P = 2.8e-89
Identities = 198/446 (44%), Positives = 286/446 (64%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+FKDV G +AK E+ E V+YLK+P +F +LG K+PKG LL G PG GKTLLAKA+A EA
Sbjct: 307 SFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 366
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVG---STRKQWEGH 472
VPF AG EF E+ G+GA RVRSLF+ A+ +APCI++IDEIDAVG ST +
Sbjct: 367 QVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTAVSGFSN 426
Query: 473 TKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
T++ TL+QLLVEMDG + +I++AATN DILD AL RPGR DRH+ + P ++ R+
Sbjct: 427 TEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTLQERK 486
Query: 531 EILELYLQDKPL--ADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
EI E +L+ L A + +A TPGF+GAD+AN+ N AA+ AA +G + + L+
Sbjct: 487 EIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTAVHTSNLD 546
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGM 647
+A +R++ GT +K+ +S+E +K+ A+HESGHA+V + E + K +I PR +ALG
Sbjct: 547 YAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSITPRTNAALGF 606
Query: 648 VTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
LP D+ +++QL R+ + +GGR +E + F R +T+GA DL T +A+ MV
Sbjct: 607 AQMLPR-DQHLFTREQLFERMCMALGGRASESISFNR--VTSGAQDDLRKVTRIAYSMVK 663
Query: 708 NCGMSDAIGPVHIKD----------RPSSE-MQSRIDAEVVKLLREAYDRVKALLKKHEK 756
GM+ +IGPV + RP S+ +Q ID E L+ AY + +L+ +
Sbjct: 664 QFGMAPSIGPVSFPEAQEGVTGIGRRPFSQGLQQMIDHEARLLVATAYRHTEQVLRDNLD 723
Query: 757 QLHALANALLEYETLSAEEIKRILLP 782
+LHALA+ALLE E ++ E+I+ ++ P
Sbjct: 724 KLHALASALLEKEVINYEDIEALIGP 749
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 193/444 (43%), Positives = 280/444 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
FKDV G +AK E+ E V+YLKNP ++ +LG K+PKG LL G PG GKTLLAKA+A EA
Sbjct: 281 FKDVAGMHEAKMEVKEFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQ 340
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ-----WEG 471
VPF AGSEF E+ G+GA RVRSLF+ A+ +APCI++IDEIDAVG R
Sbjct: 341 VPFLAMAGSEFVEVIGGLGAARVRSLFREAQARAPCIVYIDEIDAVGKKRSTNVSGFANA 400
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+QLLVEMDG + +I++A+TN D+LD AL RPGR DRHI + P ++ R+E
Sbjct: 401 EEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHIFIDLPTLQERRE 460
Query: 532 ILELYLQDKPLADDVDVKA--IARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
I E +L+ L D + +A TPGF+GAD+AN+ N AA+ AA +G + + E+
Sbjct: 461 IFEQHLKGLKLIQDASFYSQHLAELTPGFSGADIANICNEAALHAAREGHKSIDTFNFEY 520
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGMV 648
A +R++ GT ++ +S E +K+ A+HESGHA+V + E + K +I PR +ALG
Sbjct: 521 AVERVIAGTAKRNKILSPEERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFA 580
Query: 649 TQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSN 708
LP ++ +++QLL R+ + +GGRV+E + F + +TTGA DL T++A+ MV
Sbjct: 581 QILPR-EQYLFTKEQLLERMCMALGGRVSEAITFNK--VTTGAQDDLKRVTKIAYSMVKQ 637
Query: 709 CGMSDAIGPVHIKD---------RPSSE-MQSRIDAEVVKLLREAYDRVKALLKKHEKQL 758
GM +IG + D RP S+ +Q +D E L+ +AY R + LL + +L
Sbjct: 638 YGMVPSIGQISFPDGESTVGIGRRPFSQGLQQMMDHEAKVLVAQAYRRTEKLLLDNRDKL 697
Query: 759 HALANALLEYETLSAEEIKRILLP 782
L+NALLE E ++ ++I+ ++ P
Sbjct: 698 QTLSNALLEKEVINYDDIEALIGP 721
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 203/457 (44%), Positives = 282/457 (61%)
Query: 346 KEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPK-GILLTGAPGTGK 404
K + E +VK FKDV GC++AK E++E V +LKNP ++ LG K+PK G +LTG PGTGK
Sbjct: 88 KVLKDEIDVK-FKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKKGAILTGPPGTGK 146
Query: 405 TLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGS 464
TLLAKA AGEA VPF +GSEF EMFVGVG RVR LF A+K APCI+FIDEIDAVG
Sbjct: 147 TLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGR 206
Query: 465 TRKQ--WEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIV 520
R + + G +++ TL+QLLVEMDGF ++++A TN PDILDPAL RPGRFDR I
Sbjct: 207 KRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIF 266
Query: 521 VPNPDVRGRQEILELYLQDKPLADDVDVKAIARG----TPGFNGADLANLVNIAAIKAAV 576
+ PD++GR I +++L+ L ++ + +AR TPGF+GAD+AN+ N AA+ AA
Sbjct: 267 IGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAAR 326
Query: 577 DGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKA 636
+ + E A +R++ G E+KT + E KK AYHE+GHA+ + E A P+ K
Sbjct: 327 HLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKV 386
Query: 637 TIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVA-EELIFGRDHITTGASSDL 695
+I+PRG LG LP ++ +++QLL R+ + G + FGR ITTGA D
Sbjct: 387 SIIPRGKGLGYAQYLPK-EQYLYTKEQLLDRMCMTPGWPCGPRKSSFGR--ITTGAQDD- 442
Query: 696 HSATELAHYMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYD 745
T+ A+ + GM++ +G + + ++P SE +R ID EV L+ +AY
Sbjct: 443 RKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYK 502
Query: 746 RVKALLKKHEKQLHALANALLEYETLSAEEIKRILLP 782
R ALL + + + +A LLE E L + +L P
Sbjct: 503 RTVALLTEKKADVEKVALLLLEKEVLDKNNMVELLGP 539
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 195/445 (43%), Positives = 282/445 (63%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+FKDV G +AK E+ E V+YLKNP ++ +LG K+PKG LL G PG GKTLLAKA+A EA
Sbjct: 298 SFKDVAGMREAKMEVKEFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATEA 357
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHT- 473
VPF AGSEF E+ G+GA RVRSLF+ A+ +APCI++IDEIDAVG R G +
Sbjct: 358 QVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTNMSGFSN 417
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++TL+QLLVEMDG + +I++A+TN DILD AL RPGR DRHI + P ++ R+
Sbjct: 418 TEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALMRPGRLDRHIFIDLPTLQERK 477
Query: 531 EILELYLQDKPLADDVDVKAI--ARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
EI E +L+ L D ++ A TPGF+GAD+AN+ N AA+ AA +G + + E
Sbjct: 478 EIFEQHLKILKLTQPADFYSLRLAELTPGFSGADIANICNEAALHAAREGFKSIDTFSFE 537
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGM 647
+A +R++ G+ +K+ +S+E +++ A+HESGHA+V + E + K +I PR +ALG
Sbjct: 538 YAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGF 597
Query: 648 VTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
LP D+ +++QL R+ + +GGR +E + F + +TTGA DL T +A+ MV
Sbjct: 598 AQILPR-DQFLFTKEQLFERMCMALGGRASEAITFNK--VTTGAQDDLRKVTRVAYSMVK 654
Query: 708 NCGMSDAIGPVHIKD---------RPSSE-MQSRIDAEVVKLLREAYDRVKALLKKHEKQ 757
GM D++G V D RP S+ +Q ++D E L+ +AY + LL + +
Sbjct: 655 QYGMVDSVGQVSFPDSENQSGIGRRPFSQGLQQQMDLEAKMLIAKAYRHTEKLLLDNRDK 714
Query: 758 LHALANALLEYETLSAEEIKRILLP 782
L LANALLE E ++ +I+ +L P
Sbjct: 715 LILLANALLEREVVNYNDIEALLGP 739
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 194/446 (43%), Positives = 284/446 (63%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+FKDV G +AK E+ E V+YLK+P +F +LG K+PKG LL G PG GKTLLAKA+A EA
Sbjct: 307 SFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 366
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ-WEGHT- 473
VPF AG EF E+ G+GA RVRSLF+ A+ +APCI++IDEIDAVG R G +
Sbjct: 367 QVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSN 426
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++TL+QLLVEMDG + +I++A+TN DILD AL RPGR DRH+ + P ++ R+
Sbjct: 427 TEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDNALLRPGRLDRHVFIDLPTLQERR 486
Query: 531 EILELYLQDKPL--ADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
EI E +L+ L A + +A TPGF+GAD+AN+ N AA+ AA +G + E
Sbjct: 487 EIFEHHLKSLKLTQASSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFE 546
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGM 647
+A +R++ GT +K+ +S+E +K+ A+HESGHA+V + E + K +I PR +ALG
Sbjct: 547 YAVERVIAGTAKKSKILSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGF 606
Query: 648 VTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
LP D+ +++QL R+ + +GGRV+E + F + +T+GA DL T +A+ MV
Sbjct: 607 AQMLPR-DQHLFTKEQLFERMCMALGGRVSETISFNK--VTSGAQDDLRKVTRIAYSMVK 663
Query: 708 NCGMSDAIGPVHIKD----------RPSSE-MQSRIDAEVVKLLREAYDRVKALLKKHEK 756
GM+ +IGP+ + RP S+ +Q +D E L+ +AY + +L+ +
Sbjct: 664 QFGMAPSIGPISFPEVQEGLTGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVLQDNLD 723
Query: 757 QLHALANALLEYETLSAEEIKRILLP 782
+L ALANALLE E ++ E+I+ ++ P
Sbjct: 724 KLQALANALLEKEVINYEDIEALIGP 749
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 194/446 (43%), Positives = 281/446 (63%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+FKDV G +AK E+ E V+YLK+P +F +LG K+PKG LL G PG GKTLLAKA+A EA
Sbjct: 307 SFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 366
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ-WEGHT- 473
VPF AG EF E+ G+GA RVRSLF+ A+ +APCI++IDEIDAVG R G +
Sbjct: 367 QVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSN 426
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++TL+QLLVEMDG + +I++A+TN DILD AL RPGR DRH+ + P ++ R+
Sbjct: 427 TEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERR 486
Query: 531 EILELYLQDKPLADDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
EI E +L+ L + +A TPGF+GAD+AN+ N AA+ AA +G + E
Sbjct: 487 EIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFE 546
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGM 647
+A +R+L GT +K+ +S+E +K+ A+HESGHA+V + E + K +I PR +ALG
Sbjct: 547 YAVERVLAGTAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGF 606
Query: 648 VTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
LP D+ +++QL R+ + +GGR +E L F + +T+GA DL T +A+ MV
Sbjct: 607 AQMLPR-DQHLFTKEQLFERMCMALGGRASEALSF--NEVTSGAQDDLRKVTRIAYSMVK 663
Query: 708 NCGMSDAIGPVHIKD----------RPSSE-MQSRIDAEVVKLLREAYDRVKALLKKHEK 756
GM+ IGP+ + RP S+ +Q +D E L+ +AY + +L+ +
Sbjct: 664 QFGMAPGIGPISFPEAQEGLMGIGRRPFSQGLQQMMDHEARLLVAKAYRHTEKVLQDNLD 723
Query: 757 QLHALANALLEYETLSAEEIKRILLP 782
+L ALANALLE E ++ E+I+ ++ P
Sbjct: 724 KLQALANALLEKEVINYEDIEALIGP 749
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 187/380 (49%), Positives = 256/380 (67%)
Query: 351 EKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E ++K +FK+V GCD+AKQE++E V +LKNP K+T+LG K+P+G +L+G PGTGKTLLAK
Sbjct: 280 ETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAK 339
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
A AGEA VPF +GSEF EMFVGVGA RVR LF A+ AP IIFIDEIDA+G R +
Sbjct: 340 ATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKG 399
Query: 470 ------EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPN 523
+ TL+QLLVEMDGF ++ ++++A TN PD+LD AL RPGRFDRHI + +
Sbjct: 400 GALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDS 459
Query: 524 PDVRGRQEILELYLQ----DKPLADDVDVKA--IARGTPGFNGADLANLVNIAAIKAAVD 577
PDV GRQ+I ++L+ D L DD++ + +A TPGF GAD+AN N AA+ AA
Sbjct: 460 PDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARH 519
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+T E A +R++ G E+KT +S+E K+ AYHE+GHA+ + + A P+ K +
Sbjct: 520 NDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVS 579
Query: 638 IMPRGS-ALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLH 696
I+PRG ALG LP D+ +S++Q R+ + +GGRV+EEL F +T+GA D
Sbjct: 580 IIPRGQGALGYAQYLPP-DQYLISEEQFRHRMIMALGGRVSEELHF--PSVTSGAHDDFK 636
Query: 697 SATELAHYMVSNCGMSDAIG 716
T++A+ MV++ GMS IG
Sbjct: 637 KVTQMANAMVTSLGMSPKIG 656
Score = 551 (199.0 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 131/323 (40%), Positives = 199/323 (61%)
Query: 476 TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILEL 535
TL+QLLVEMDGF ++ ++++A TN PD+LD AL RPGRFDRHI + +PDV GRQ+I +
Sbjct: 412 TLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLV 471
Query: 536 YLQ----DKPLADDVDVKA--IARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+L+ D L DD++ + +A TPGF GAD+AN N AA+ AA +T E
Sbjct: 472 HLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYITIHHFEQ 531
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGS-ALGMV 648
A +R++ G E+KT +S+E K+ AYHE+GHA+ + + A P+ K +I+PRG ALG
Sbjct: 532 AIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYA 591
Query: 649 TQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSN 708
LP D+ +S++Q R+ + +GGRV+EEL F +T+GA D T++A+ MV++
Sbjct: 592 QYLPP-DQYLISEEQFRHRMIMALGGRVSEELHF--PSVTSGAHDDFKKVTQMANAMVTS 648
Query: 709 CGMSDAIGPV-------HIK-DRPSSEMQSR-IDAEVVKLLREAYDRVKALLKKHEKQLH 759
GMS IG + + K ++P S +R ID EV ++ +A+ LL K+ ++
Sbjct: 649 LGMSPKIGYLSFDQNDGNFKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVD 708
Query: 760 ALANALLEYETLSAEEIKRILLP 782
+A LL E ++ E++ R+L P
Sbjct: 709 LVAKELLRKEAITREDMIRLLGP 731
Score = 42 (19.8 bits), Expect = 7.8e-56, Sum P(2) = 7.8e-56
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 374 VEYLKNPSKFTRLGGKLPKGILLTG 398
++Y++ S FT L LP ILL G
Sbjct: 216 IKYIERSSPFTFLFPFLPTIILLGG 240
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 191/439 (43%), Positives = 268/439 (61%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F DV GC++AK E++E V +LKNP ++ LG K+PKG LLTG PGTGKTLLAKA AGEAG
Sbjct: 302 FADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEAG 361
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGH---- 472
VPF GSEF EMFVGVG RVR +F A+K APCI+F+DEIDA+G RK+ GH
Sbjct: 362 VPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIG--RKRGRGHFGGQ 419
Query: 473 --TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
+ TL+QLLVEMDGF ++++A TN PD+LDPAL RPGRFDR I + PD++GR
Sbjct: 420 SEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRS 479
Query: 531 EILELYLQ----DKPLADDVDVKAIARGTPGF--NGADLANLVNIAAIKAAVDGGEKLTA 584
I ++L+ D+ L+ D + +A TPGF +GAD++N+ N AA+ AA +
Sbjct: 480 SIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAALIAARHLNPSVGE 539
Query: 585 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 644
E A +R++ G E+KT + K AYHE+GHA+V + E A P+ K +I+PRG
Sbjct: 540 KHFEQAIERVIGGLEKKTQVLQPGEKMTVAYHEAGHAVVGWFLEHADPLLKVSIVPRGKG 599
Query: 645 LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHY 704
LG LP ++ +++QL R+ +GGRVAE+L FGR +TTGA DL T+ A+
Sbjct: 600 LGYAQCLPR-EQYLYTREQLFDRMCAMLGGRVAEQLFFGR--VTTGAQDDLRKVTQSAYA 656
Query: 705 MVSNCGMSDAIGPVHIK-DRPSSEMQSRIDAEVVKLLREAYDRVKALL-KKHEKQLHALA 762
+ GMS+ +G V RP + + +E L + + V+ L+ H + L L
Sbjct: 657 QIVQFGMSEKLGQVSFDLPRPGEALVEKPFSEATAQLID--EEVRRLIGSAHARTLDLLT 714
Query: 763 NALLEYETLSAEEIKRILL 781
+ + + +++ +L
Sbjct: 715 RCREQVDKVGRRLLEKEVL 733
Score = 546 (197.3 bits), Expect = 1.9e-52, P = 1.9e-52
Identities = 126/329 (38%), Positives = 190/329 (57%)
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
+ + TL+QLLVEMDGF ++++A TN PD+LDPAL RPGRFDR I + PD++GR
Sbjct: 419 QSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGR 478
Query: 530 QEILELYLQ----DKPLADDVDVKAIARGTPGF--NGADLANLVNIAAIKAAVDGGEKLT 583
I ++L+ D+ L+ D + +A TPGF +GAD++N+ N AA+ AA +
Sbjct: 479 SSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAALIAARHLNPSVG 538
Query: 584 ATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGS 643
E A +R++ G E+KT + K AYHE+GHA+V + E A P+ K +I+PRG
Sbjct: 539 EKHFEQAIERVIGGLEKKTQVLQPGEKMTVAYHEAGHAVVGWFLEHADPLLKVSIVPRGK 598
Query: 644 ALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAH 703
LG LP ++ +++QL R+ +GGRVAE+L FGR +TTGA DL T+ A+
Sbjct: 599 GLGYAQCLPR-EQYLYTREQLFDRMCAMLGGRVAEQLFFGR--VTTGAQDDLRKVTQSAY 655
Query: 704 YMVSNCGMSDAIGPVH---------IKDRPSSEMQSR-IDAEVVKLLREAYDRVKALLKK 753
+ GMS+ +G V + ++P SE ++ ID EV +L+ A+ R LL +
Sbjct: 656 AQIVQFGMSEKLGQVSFDLPRPGEALVEKPFSEATAQLIDEEVRRLIGSAHARTLDLLTR 715
Query: 754 HEKQLHALANALLEYETLSAEEIKRILLP 782
+Q+ + LLE E L ++ +L P
Sbjct: 716 CREQVDKVGRRLLEKEVLERADMVELLGP 744
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 192/446 (43%), Positives = 281/446 (63%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+F+DV G +AK E+ E V+YLK+P +F +LG K+PKG LL G PG GKTLLAKA+A EA
Sbjct: 307 SFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 366
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHT- 473
VPF AG EF E+ G+GA RVRSLF+ A+ +APCI++IDEIDAVG R G +
Sbjct: 367 QVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSN 426
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++TL+QLLVEMDG + +I++A+TN D+LD AL RPGR DRH+ + P ++ R+
Sbjct: 427 TEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERR 486
Query: 531 EILELYLQDKPLADDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
EI E +L+ L + +A TPGF+GAD+AN+ N AA+ AA +G + E
Sbjct: 487 EIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFE 546
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGM 647
+A +R++ GT +K+ +S+E +++ A+HESGHA+V + E + K +I PR +ALG
Sbjct: 547 YAVERVIAGTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGF 606
Query: 648 VTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
LP D+ +++QL R+ + +GGR AE + F R +T+GA DL T +A+ MV
Sbjct: 607 SQMLPR-DQYLFTKEQLFERMCMALGGRAAEAISFSR--VTSGAQDDLRKVTRIAYSMVK 663
Query: 708 NCGMSDAIGPVHIKD----------RPSSE-MQSRIDAEVVKLLREAYDRVKALLKKHEK 756
GM+ +IGPV + RP S+ +Q +D E L+ +AY + +L +
Sbjct: 664 QFGMAPSIGPVSFPEAQEGLMGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVLLDNLD 723
Query: 757 QLHALANALLEYETLSAEEIKRILLP 782
+L ALANALLE E ++ E+I+ ++ P
Sbjct: 724 KLQALANALLEKEVINYEDIEALIGP 749
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 179/381 (46%), Positives = 255/381 (66%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F+DV G +AKQE+ E V+YLK+P K+ RLG K+P+G LL G PG GKTLLAKA+A EA
Sbjct: 340 FRDVAGLSEAKQEVKEFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQ 399
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE------ 470
VPF GSEF EM G+GA RVR LF+ KK+APCII+IDEIDA+G R E
Sbjct: 400 VPFLSMNGSEFIEMIGGLGAARVRDLFKEGKKRAPCIIYIDEIDAIGRQRSGTESMGQGS 459
Query: 471 -GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
G +++TL+QLLVEMDG EG++++A+TN DILD AL RPGRFDRHI++ P + R
Sbjct: 460 SGESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAER 519
Query: 530 QEILELYLQDKPLADDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATEL 587
+EI E +L L + +AR TPGF+GAD+AN+ N AA+ AA + ++++ L
Sbjct: 520 KEIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNL 579
Query: 588 EFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGS-ALG 646
E+A +R++ GTE+++ +S +K+ AYHESGHA+V + + + K TI+PR S ALG
Sbjct: 580 EYAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALG 639
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
PS ++ S+++L ++ + +GGR AE L+F R ITTGA +DL T++A+ +
Sbjct: 640 FAQYTPS-EQHLYSKEELFDKMCMALGGRAAENLVFNR--ITTGAQNDLEKVTKIAYSQI 696
Query: 707 SNCGMSDAIGPVHIKDRPSSE 727
GM+D +GP++++D +E
Sbjct: 697 KKFGMNDTLGPIYVRDADETE 717
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 129/331 (38%), Positives = 203/331 (61%)
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
G +++TL+QLLVEMDG EG++++A+TN DILD AL RPGRFDRHI++ P + R+
Sbjct: 461 GESEQTLNQLLVEMDGMATKEGVLMLASTNRADILDKALLRPGRFDRHILIDLPTLAERK 520
Query: 531 EILELYLQDKPLADDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
EI E +L L + +AR TPGF+GAD+AN+ N AA+ AA + ++++ LE
Sbjct: 521 EIFEKHLSSVKLESPPTTFSQRLARLTPGFSGADIANVCNEAALHAARNTQMEVSSKNLE 580
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGS-ALGM 647
+A +R++ GTE+++ +S +K+ AYHESGHA+V + + + K TI+PR S ALG
Sbjct: 581 YAVERLVGGTEKRSHALSLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGF 640
Query: 648 VTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
PS ++ S+++L ++ + +GGR AE L+F R ITTGA +DL T++A+ +
Sbjct: 641 AQYTPS-EQHLYSKEELFDKMCMALGGRAAENLVFNR--ITTGAQNDLEKVTKIAYSQIK 697
Query: 708 NCGMSDAIGPVHIKDRPSSE----------------MQSRIDAEVVKLLREAYDRVKALL 751
GM+D +GP++++D +E M+S ID E ++ AY + +L
Sbjct: 698 KFGMNDTLGPIYVRDADETEGGGAMGSGGKKPFSRAMESMIDNEARHVVASAYQTTEGIL 757
Query: 752 KKHEKQLHALANALLEYETLSAEEIKRILLP 782
H +L LA ALLE ETL +++ +++ P
Sbjct: 758 TTHRDKLEKLAEALLEKETLDYDQVVQLIGP 788
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
Identities = 192/450 (42%), Positives = 276/450 (61%)
Query: 351 EKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
+K +K FKDV GC +AK E+ E V+YLKNP +FT+LG KLP+G LLTG PG GKTLLAK
Sbjct: 277 KKQLKIKFKDVAGCSEAKVEIREFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAK 336
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
A+A E+ VPF GSEF E+ G+GA R+R LF+ A+ +APCII+IDEIDA+G R +
Sbjct: 337 ALAAESTVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEIDAIGRKRSEG 396
Query: 470 ----------EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHI 519
G ++TL+QLLVEMDG G++++A+TN D+LD AL RPGRFDRHI
Sbjct: 397 AGAGGGFGGGSGEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHI 456
Query: 520 VVPNPDVRGRQEILELYLQDKPL--ADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVD 577
+ P V R+++ ELY++ L A + +A TPGF GAD+ N+ N +AI+AA +
Sbjct: 457 SIDLPTVLERKDMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAASN 516
Query: 578 GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKAT 637
+T ++E+A DR+L G+E+++ + EE +++ AYHE+GHA+V + E + K T
Sbjct: 517 KCHVVTHKDMEYALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKVT 576
Query: 638 IMPRGSA-LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLH 696
I+PR SA LG P D+ S+ +L R+ + +GGR AE L FGR T+GA DL
Sbjct: 577 IIPRTSAALGFAQYSPR-DKHLFSKDELFDRMCMMLGGRCAENLKFGR--ATSGAQDDLQ 633
Query: 697 SATELAHYMVSNCGMSDAIGPVHIKDRPSSE-MQSRIDAEVVKLLREAYDRVKALL--KK 753
T+ A+ V GMS +GP+ P++E Q + K +D+ L+ K
Sbjct: 634 KVTKSAYAQVKLYGMSSIVGPLSF---PNTEGFQIK---PYSKKFASTFDQEATLIVAKA 687
Query: 754 HEKQLHALANALLEYETLSAEEIKRILLPY 783
+E + N + + ET++ +KR +L Y
Sbjct: 688 NEATTDLIKNNMDKLETIAQALLKREVLNY 717
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 123/320 (38%), Positives = 192/320 (60%)
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
G ++TL+QLLVEMDG G++++A+TN D+LD AL RPGRFDRHI + P V R+
Sbjct: 408 GEEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 467
Query: 531 EILELYLQDKPL--ADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ELY++ L A + +A TPGF GAD+ N+ N +AI+AA + +T ++E
Sbjct: 468 DMFELYMRKIKLDHAPQEYSQRLAALTPGFTGADIMNVCNESAIRAASNKCHVVTHKDME 527
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA-LGM 647
+A DR+L G+E+++ + EE +++ AYHE+GHA+V + E + K TI+PR SA LG
Sbjct: 528 YALDRVLAGSEKRSRSLVEEEREVVAYHEAGHALVGWMLEHTDALLKVTIIPRTSAALGF 587
Query: 648 VTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
P D+ S+ +L R+ + +GGR AE L FGR T+GA DL T+ A+ V
Sbjct: 588 AQYSPR-DKHLFSKDELFDRMCMMLGGRCAENLKFGR--ATSGAQDDLQKVTKSAYAQVK 644
Query: 708 NCGMSDAIGPVHIKD------RP-SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHA 760
GMS +GP+ + +P S + S D E ++ +A + L+K + +L
Sbjct: 645 LYGMSSIVGPLSFPNTEGFQIKPYSKKFASTFDQEATLIVAKANEATTDLIKNNMDKLET 704
Query: 761 LANALLEYETLSAEEIKRIL 780
+A ALL+ E L+ E++K+++
Sbjct: 705 IAQALLKREVLNYEDVKKLI 724
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 184/382 (48%), Positives = 252/382 (65%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TF DV G D+AK+EL E+VE+LKNP ++ RLG + P+G+LL G PGTGKTLLAKA+AGE+
Sbjct: 327 TFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGES 386
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAV-----GSTRKQWE 470
VPF + SEF E++VG+GA RVR LF AKK+AP IIFIDEIDAV G R
Sbjct: 387 DVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSN 446
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++TL+QLL EMDGF+ + +I++ ATN D+LDPAL RPGRFDR + V +PD GR+
Sbjct: 447 DEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRE 506
Query: 531 EILELYLQDK--PLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
IL++++ K PL DDV++ +IA T GF GADLANLVN AA+ A K+T +++
Sbjct: 507 SILKVHVSKKELPLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKS--KMTVDKID 564
Query: 589 F--AKDRILMGTERKTMFISEESKKLTAYHESGHAIV----AFNTEGAHPIHKATIMPR- 641
F A +R + G E+KT + K + A HE+GHA+V A G + K +I+PR
Sbjct: 565 FIHAVERSIAGIEKKTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRS 624
Query: 642 GSALGMVTQLPSSDETS--VSQKQLLARLDVCMGGRVAEELIF-GRDHITTGASSDLHSA 698
G ALG T +P + E + +L RL +GGR AEE+++ GR I+TGA D+ A
Sbjct: 625 GGALGF-TYIPPTHEDRYLLFIDELHGRLVTLLGGRAAEEVVYSGR--ISTGALDDIRRA 681
Query: 699 TELAHYMVSNCGMSDAIGPVHI 720
T++A+ V+ G+++ IGPV +
Sbjct: 682 TDMAYKAVAEYGLNEKIGPVSV 703
Score = 166 (63.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 71/258 (27%), Positives = 119/258 (46%)
Query: 542 LADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERK 601
LA+ V+ A+ G D + ++ A++ ++ G EK TA L G+E+
Sbjct: 541 LANLVNEAALLAGRKSKMTVDKIDFIH--AVERSIAGIEKKTAR---------LKGSEKA 589
Query: 602 TMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGMVTQLPSSDETS-- 658
+ E + G A+ + G + K +I+PR G ALG T +P + E
Sbjct: 590 VVARHEAGHAVV-----GTAVASL-LSGQSRVEKLSILPRSGGALGF-TYIPPTHEDRYL 642
Query: 659 VSQKQLLARLDVCMGGRVAEELIF-GRDHITTGASSDLHSATELAHYMVSNCGMSDAIGP 717
+ +L RL +GGR AEE+++ GR I+TGA D+ AT++A+ V+ G+++ IGP
Sbjct: 643 LFIDELHGRLVTLLGGRAAEEVVYSGR--ISTGALDDIRRATDMAYKAVAEYGLNEKIGP 700
Query: 718 VH--------IKD-------RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALA 762
V I D R + + EV LL+ A D +++ + L L
Sbjct: 701 VSVATLSAGGIDDSGGSPWGRDQGHLVDLVQREVTNLLQSALDVALTVVRANPDVLEGLG 760
Query: 763 NALLEYETLSAEEIKRIL 780
L + E + EE+++ L
Sbjct: 761 AQLEDEEKVEGEELQKWL 778
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 187/382 (48%), Positives = 250/382 (65%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TF DV G D+AK+EL E+VE+L+NP K+ RLG + P+G+LL G PGTGKTLLAKA+AGEA
Sbjct: 323 TFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEA 382
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--KQWEGHT 473
VPF + SEF E++VG+GA RVR LF AKK+AP IIFIDEIDAV +R K G
Sbjct: 383 EVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSN 442
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++TL+QLL EMDGF+ N +I++ ATN D+LDPAL RPGRFDR + V PD GR+
Sbjct: 443 DEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRE 502
Query: 531 EILELYLQDK--PLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
IL +++ K PL DDV++ +IA T GF GADLANLVN AA+ A K +++
Sbjct: 503 SILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKN--KTNVEKID 560
Query: 589 F--AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAF---NTEGAHP-IHKATIMPR- 641
F A +R + G E+K+ + K + A HE+GHA+V N P + K +I+PR
Sbjct: 561 FIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRT 620
Query: 642 GSALGMVTQLP--SSDETSVSQKQLLARLDVCMGGRVAEELIF-GRDHITTGASSDLHSA 698
G ALG T +P S D + +LL RL +GGR AEE+++ GR I+TGA D+ A
Sbjct: 621 GGALGF-TYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGR--ISTGAFDDIRRA 677
Query: 699 TELAHYMVSNCGMSDAIGPVHI 720
T++A+ V+ G++ IGPV +
Sbjct: 678 TDMAYKAVAEYGLNQKIGPVSV 699
Score = 174 (66.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 75/258 (29%), Positives = 121/258 (46%)
Query: 542 LADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERK 601
LA+ V+ A+ G N ++ + I A++ ++ G EK +A L G E+
Sbjct: 537 LANLVNEAALLAGRK--NKTNVEKIDFIQAVERSIAGIEKKSAR---------LKGNEKA 585
Query: 602 TMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGMVTQLP--SSDETS 658
+ E + G A+ T G + K +I+PR G ALG T +P S D
Sbjct: 586 VVARHEAGHAVV-----GTAVANLLT-GQPRVEKLSILPRTGGALGF-TYIPPTSEDRYL 638
Query: 659 VSQKQLLARLDVCMGGRVAEELIF-GRDHITTGASSDLHSATELAHYMVSNCGMSDAIGP 717
+ +LL RL +GGR AEE+++ GR I+TGA D+ AT++A+ V+ G++ IGP
Sbjct: 639 LFIDELLGRLVTLLGGRAAEEVVYSGR--ISTGAFDDIRRATDMAYKAVAEYGLNQKIGP 696
Query: 718 VH--------IKD-------RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALA 762
V I D R ++ + EV LL+ A D ++++ + L L
Sbjct: 697 VSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSALDVALSVVRANPDVLEGLG 756
Query: 763 NALLEYETLSAEEIKRIL 780
L E E + EE+++ L
Sbjct: 757 AQLEEKEKVEGEELQKWL 774
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 506 (183.2 bits), Expect = 9.0e-75, Sum P(2) = 9.0e-75
Identities = 107/212 (50%), Positives = 144/212 (67%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+F+DV G +AK E+ E V+YLK+P +F +LG K+PKG LL G PG GKTLLAKA+A EA
Sbjct: 307 SFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 366
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHT- 473
VPF AG EF E+ G+GA RVRSLF+ A+ +APCI++IDEIDAVG R G +
Sbjct: 367 QVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSN 426
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++TL+QLLVEMDG + +I++A+TN D+LD AL RPGR DRH+ + P ++ R+
Sbjct: 427 TEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERR 486
Query: 531 EILELYLQDKPLADDVDV--KAIARGTPGFNG 560
EI E +L+ L + +A TPGF+G
Sbjct: 487 EIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 297 (109.6 bits), Expect = 9.0e-75, Sum P(2) = 9.0e-75
Identities = 72/198 (36%), Positives = 114/198 (57%)
Query: 597 GTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGMVTQLPSSD 655
GT +K+ +S+E +++ A+HESGHA+V + E + K +I PR +ALG LP D
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPR-D 576
Query: 656 ETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAI 715
+ +++QL R+ + +GGR AE + F R +T+GA DL T +A+ MV GM+ +I
Sbjct: 577 QYLFTKEQLFERMCMALGGRAAEAISFSR--VTSGAQDDLRKVTRIAYSMVKQFGMAPSI 634
Query: 716 GPVHIKD----------RPSSE-MQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANA 764
GPV + RP S+ +Q +D E L+ AY + +L + +L ALANA
Sbjct: 635 GPVSFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANA 694
Query: 765 LLEYETLSAEEIKRILLP 782
LLE E ++ E+I+ ++ P
Sbjct: 695 LLEKEVINYEDIEALIGP 712
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 506 (183.2 bits), Expect = 9.0e-75, Sum P(2) = 9.0e-75
Identities = 107/212 (50%), Positives = 144/212 (67%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+F+DV G +AK E+ E V+YLK+P +F +LG K+PKG LL G PG GKTLLAKA+A EA
Sbjct: 307 SFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEA 366
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHT- 473
VPF AG EF E+ G+GA RVRSLF+ A+ +APCI++IDEIDAVG R G +
Sbjct: 367 QVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSN 426
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++TL+QLLVEMDG + +I++A+TN D+LD AL RPGR DRH+ + P ++ R+
Sbjct: 427 TEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERR 486
Query: 531 EILELYLQDKPLADDVDV--KAIARGTPGFNG 560
EI E +L+ L + +A TPGF+G
Sbjct: 487 EIFEQHLKGLKLTQPSSFYSQRLAELTPGFSG 518
Score = 297 (109.6 bits), Expect = 9.0e-75, Sum P(2) = 9.0e-75
Identities = 72/198 (36%), Positives = 114/198 (57%)
Query: 597 GTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALGMVTQLPSSD 655
GT +K+ +S+E +++ A+HESGHA+V + E + K +I PR +ALG LP D
Sbjct: 518 GTAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPR-D 576
Query: 656 ETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAI 715
+ +++QL R+ + +GGR AE + F R +T+GA DL T +A+ MV GM+ +I
Sbjct: 577 QYLFTKEQLFERMCMALGGRAAEAISFSR--VTSGAQDDLRKVTRIAYSMVKQFGMAPSI 634
Query: 716 GPVHIKD----------RPSSE-MQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANA 764
GPV + RP S+ +Q +D E L+ AY + +L + +L ALANA
Sbjct: 635 GPVSFPEAQEGLVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANA 694
Query: 765 LLEYETLSAEEIKRILLP 782
LLE E ++ E+I+ ++ P
Sbjct: 695 LLEKEVINYEDIEALIGP 712
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 175/435 (40%), Positives = 255/435 (58%)
Query: 353 NVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
+VK F DV G + EL E+V++ + + R G K+P GILL G PG GKTLLAKA+A
Sbjct: 406 DVK-FTDVAGLGKIRLELEEIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVA 464
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG- 471
GEAGV FF + S+F E++VGVGA RVR+L+Q A++ AP ++FIDE+DAVG R +G
Sbjct: 465 GEAGVNFFSISASQFVEIYVGVGASRVRALYQEARENAPSVVFIDELDAVGRERGLIKGS 524
Query: 472 ---HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
TL+QLLV +DGFE +I +A+TN PDILDPAL RPGRFDR I +P P + G
Sbjct: 525 GGQERDATLNQLLVSLDGFEGRGEVITIASTNRPDILDPALVRPGRFDRKIFIPKPGLIG 584
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
R EIL+++ + KP+A+D+D A+A T G GA+LAN+V IAAI DG +LT +L
Sbjct: 585 RMEILQVHARKKPMAEDLDYMAVASMTDGMVGAELANIVEIAAINMMRDGRTELTTDDLL 644
Query: 589 FAKDRILMGT-ERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR-GSALG 646
A G +RK S E+ + A +E+ A+VA N I TI PR G LG
Sbjct: 645 QAAQIEERGMLDRKDR--SLETWRQVAINEAAMAVVAVNFPDMKNIEFLTINPRAGRELG 702
Query: 647 MV-TQLP--SSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAH 703
V ++ E +S++ +L + V + R A+EL +G D ++T + +A A
Sbjct: 703 YVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLSTIWAETSDNARSAAR 762
Query: 704 YMVSNCGMSD---AIGPVHIKDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHA 760
+V G+SD + + DR + ID E +++L Y+R K +L ++ +
Sbjct: 763 SLVLG-GLSDKHHGLNNFWVADRIND-----IDVEALRILNMCYERAKEILGRNRTLMDE 816
Query: 761 LANALLEYETLSAEE 775
+ L++ ++L+ +E
Sbjct: 817 VVEKLVQKKSLTKQE 831
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 681 (244.8 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 146/353 (41%), Positives = 220/353 (62%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TF DV G D+ K EL E+V++L+NP K+ G K+PKG+L+ G PG GKTL+AKA+AGEA
Sbjct: 150 TFNDVAGVDEVKMELSELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEA 209
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTK- 474
GVPFFY++GS F E++VG+GA+RVR LF AK AP I+FIDEIDAVG R + +
Sbjct: 210 GVPFFYQSGSSFVEIYVGMGAKRVRELFSKAKMMAPSIVFIDEIDAVGKARGEMSNVERD 269
Query: 475 KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
TL+QLL +MDGFE N G+I++AATN +++DPAL R GRFDR I + PD + R +ILE
Sbjct: 270 STLNQLLTQMDGFEDNSGVIVIAATNKIELMDPALLRSGRFDRRIFLSLPDFKDRLKILE 329
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRI 594
+Y++DK +++++ IA+ + GF+GA L LVN AAI A + ++ +++
Sbjct: 330 IYMKDKN--NNINLNKIAKASVGFSGAGLETLVNEAAINALRRNSALVEESDFYAVLNKV 387
Query: 595 LMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSS 654
L+G ++K + + E KK+ A +++ A+ A+ + K T++ +
Sbjct: 388 LLG-KKKILSFNNEEKKIQATYQAAKALSAYYLDIG--FEKITLIE--------DRFKEY 436
Query: 655 DETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
+ S+ +L+ R+ V + G A +LI+ + T + D EL YM+S
Sbjct: 437 EHNIRSKSELINRIKVYLAGSRAMKLIYNESY--TNSQDDFLKIKELLDYMLS 487
Score = 39 (18.8 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 740 LREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
L E + L + ++ L+ LLE E + +++K I+
Sbjct: 496 LSEQKKEMDEFLNSMKDKILKLSELLLEKEKIEYDDVKDIM 536
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 667 (239.9 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 161/453 (35%), Positives = 255/453 (56%)
Query: 342 KELNKEVMPEKNVKTFK--DVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGA 399
K++ + +++ T K DV G AK L++V+E++K P K K+P G L G
Sbjct: 850 KDIQETSFFNQSLPTEKLDDVIGLQRAKNRLLDVIEWMKFPDKLQNFDVKIPTGFLFAGP 909
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PGTGKT LAKA+AGE G+PFF + SE +G + ++ +LF A+K AP I+FIDEI
Sbjct: 910 PGTGKTFLAKAVAGECGLPFFSVSASELSSTIIGGSSEKIMALFSVARKYAPSIVFIDEI 969
Query: 460 DAVGSTRKQ-WEGHTKKT---LHQLLVEMDGFEQNEG-IILMAATNLPDILDPALTRPGR 514
DA+ S R + +G++++ ++ LL EMDGF +E + +MAATN P +LD A+ RPGR
Sbjct: 970 DAIASQRSEDSQGNSRERNAIVNTLLTEMDGFSSSESPVFVMAATNYPQLLDKAILRPGR 1029
Query: 515 FDRHIVVPNPDVRGRQEILELYLQDKPLA-DDVDVKAIARGTPGFNGADLANLVNIAAIK 573
FD I P+ R E + Q + L D+ A+ + G + A++ ++ AI
Sbjct: 1030 FDETIFCDLPNSEARTIFFEKFAQKQNLQWQQSDLTALVSSSQGMSSAEIDQVLR-EAIY 1088
Query: 574 AAVDGGEK-LTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHP 632
AV G EK LT ++ R++ G+ + + + +E K+ TA+HE+ H +
Sbjct: 1089 QAV-GTEKPLTIEHIKQTIVRVVYGSPSENIKLGKEEKRRTAFHEAAHLLTYKLLFPNQI 1147
Query: 633 IHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGR-DHITTGA 691
I ATI PR +LG V S + S S+ +++ +L V + GRVAE+L D I+TGA
Sbjct: 1148 IDFATIEPRNQSLGFVATRASEEYESYSKTRVMNKLQVLLAGRVAEKLCTNNADEISTGA 1207
Query: 692 SSDLHSATELAHYMVSNCGMSDAIGPVHI---KDRPSSEMQSRIDAEVVKLLREAYDRVK 748
S+D+ AT+LA + + + G+ +++GPV++ SE+ ++ V + L A V+
Sbjct: 1208 SNDIEKATQLAMHAIYDGGIEESVGPVNVGILTKFEESELLAKAQKAVQQWLITAEQSVE 1267
Query: 749 ALLKKHEKQLHALANALLEYETLSAEEIKRILL 781
LL + QL +AN LLE E+L ++EI + +
Sbjct: 1268 KLLNDNCHQLELVANTLLEKESLLSDEINTLFI 1300
Score = 42 (19.8 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 271 GVSEKQPLHVVMVDPKVSNKSRFAQELISTILFTVAV 307
G + QP H+++ D S Q L++ + VA+
Sbjct: 474 GTVKAQPRHILLFDEIEKAHSNVIQSLLTLLDSGVAI 510
Score = 38 (18.4 bits), Expect = 1.5e-67, Sum P(3) = 1.5e-67
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 208 FE-QRDHEVDSRGVVEYLR 225
FE Q D ++D VVEY R
Sbjct: 99 FESQLDGDIDITLVVEYFR 117
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 666 (239.5 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 160/431 (37%), Positives = 238/431 (55%)
Query: 359 DVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVP 418
DV G + AK+ L+EVV +LK P K G K+P G L +G PGTGKTLLAKA+AGE +P
Sbjct: 852 DVIGLERAKRRLIEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAKAVAGECELP 911
Query: 419 FFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ-WEGHTKK-- 475
FF A SE G ++ LF A+K AP IIFIDEIDA+ + R +G ++
Sbjct: 912 FFSVAASELSTPHSGGTTENIKQLFATARKYAPSIIFIDEIDAIAAQRTDNSDGSSRDKN 971
Query: 476 -TLHQLLVEMDGFEQNE-GIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEIL 533
T++ LL EMDGF E + +MAATN P +LD A+TRPGRFD I P+ R
Sbjct: 972 LTVNALLTEMDGFSIAEVPVFVMAATNHPQLLDSAITRPGRFDETIYCDLPNKNARLIFF 1031
Query: 534 ELYLQDKPLA-DDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 592
+ + L + +++ + G + A++ ++ +I AV ++LT ++
Sbjct: 1032 KRFASKHKLNWQETELQQLVSSAQGMSSAEIDQVLR-ESIYQAVGENQQLTTEHIKQTMI 1090
Query: 593 RILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLP 652
RI+ G +F+ E K+ TAYHE+ H + PI TI PR ALG V
Sbjct: 1091 RIVYGAPSDHIFLGAEEKRRTAYHEAAHLLAYKLLFPKQPIDFITIEPRNQALGFVATRA 1150
Query: 653 SSDETSVSQKQLLARLDVCMGGRVAEELIFGR-DHITTGASSDLHSATELAHYMVSNCGM 711
S + S S+++++ +L V + GRVAE+L G + ++TGAS+D+ AT+LA + + G+
Sbjct: 1151 SEEYESYSKRRVMHKLQVLLAGRVAEKLCTGDCEEVSTGASNDIEKATQLAMHAIYEGGI 1210
Query: 712 SDAIGPVHIK---DRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEY 768
+GPV+I S++ + V + L ++ +V+ LLK H +QL +A LL+
Sbjct: 1211 EPTVGPVNIAMLTKFEESDLLANAQQAVKQWLDQSEQQVEQLLKDHYQQLTLVAETLLDK 1270
Query: 769 ETLSAEEIKRI 779
E+L EEI I
Sbjct: 1271 ESLLGEEINLI 1281
Score = 40 (19.1 bits), Expect = 1.2e-65, Sum P(2) = 1.2e-65
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 68 LQNVDSEDSKLLNNSNPD 85
+Q+ D +++ L N+S PD
Sbjct: 830 IQSKDLQETSLFNHSLPD 847
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 131/248 (52%), Positives = 172/248 (69%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F DV+G D AK ELVE+V L+ + +LG +LP+G+LL G PGTGKTLLA+A+AGEAG
Sbjct: 333 FDDVEGVDSAKDELVEIVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAG 392
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR-KQWEGHTKK 475
VPFF + SEF E+FVG GA R+R LF AA+K +P IIFIDE+DAVG R + + +
Sbjct: 393 VPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIFIDELDAVGGKRGRSFNDERDQ 452
Query: 476 TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILEL 535
TL+QLL EMDGFE + +I++AATN P+ LD AL RPGRF R ++V PD GR++IL +
Sbjct: 453 TLNQLLTEMDGFESDTKVIVIAATNRPEALDSALCRPGRFSRKVLVAEPDQEGRRKILAI 512
Query: 536 YLQDKPLADDVDV--KAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDR 593
+L+D PL +D + +A TPGF GADLAN+VN AA+ AA GGE + ++ A +R
Sbjct: 513 HLRDVPLEEDAFLICDLVASLTPGFVGADLANIVNEAALLAARRGGEAVAREDIMEAIER 572
Query: 594 ILMGTERK 601
G K
Sbjct: 573 AKFGINDK 580
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 589 (212.4 bits), Expect = 1.3e-56, P = 1.3e-56
Identities = 129/281 (45%), Positives = 181/281 (64%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F DV G D+A EL E+V+YLKNP F ++G K P G+LL G PG GKTL+AKAIAGEAG
Sbjct: 429 FADVAGIDEAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAG 488
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ-------- 468
VPF+ AGSEF E+ VGVG+ R+R LF+ AK P +IFIDEIDA+ +TR+Q
Sbjct: 489 VPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDAL-ATRRQGIFKENSD 547
Query: 469 --WEGHTKK---TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPN 523
+ T++ TL+QLL+E+DGF+ +G+I + ATN D+LDPAL RPGRFDR I V
Sbjct: 548 QLYNAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRP 607
Query: 524 PDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
P+ +GR +IL+++ ++D VD+ + A PG++GA LA LV AA+ A +
Sbjct: 608 PNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSIL 667
Query: 584 ATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVA 624
++++ A DR+ +G R + + + + A E G AI +
Sbjct: 668 QSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITS 708
Score = 370 (135.3 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 106/307 (34%), Positives = 166/307 (54%)
Query: 454 IFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPG 513
IF + D + + Q E T TL+QLL+E+DGF+ +G+I + ATN D+LDPAL RPG
Sbjct: 541 IFKENSDQLYNAATQ-ERET--TLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPG 597
Query: 514 RFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIK 573
RFDR I V P+ +GR +IL+++ ++D VD+ + A PG++GA LA LV AA+
Sbjct: 598 RFDRKIRVRPPNAKGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALV 657
Query: 574 AAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESG-----HAIVAFNTE 628
A + ++++ A DR+ +G R + + + + A E G H ++ +
Sbjct: 658 AVRKTHNSILQSDMDDAVDRLTVGPTRIGLELGHQGQCRRATTEVGVAITSHLLLRYENA 717
Query: 629 GAHPIHKATIMPRGSALGMVTQLPSSDETSVSQK--QLLARLDVCMGGRVAEELIFGRDH 686
+ +I+PRG L V DE+ + + QLL RL V +GGR AEE+I+G D
Sbjct: 718 KIERCDRVSIIPRGQTLSQVVFHRLDDESYMFGRLPQLLHRLQVLLGGRAAEEVIYGSD- 776
Query: 687 ITTGASSD-LHSATELAHYMVSNCGMSDAI---G-PVHIKDRPSSEMQSRIDAEVVKLLR 741
T+ AS D L A+ LA +++ + + + G P + RP + R+D E L
Sbjct: 777 -TSKASVDYLSDASWLARKILTIWNLENPMVIHGEPPPWRKRPQF-VGPRLDFE--GSLY 832
Query: 742 EAYDRVK 748
+ YD V+
Sbjct: 833 DDYDLVE 839
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 570 (205.7 bits), Expect = 7.2e-55, P = 7.2e-55
Identities = 160/447 (35%), Positives = 244/447 (54%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 410
EK TF D G + K+EL E+V LKN +F G PKG+LL G PGTGKTLLAKA
Sbjct: 309 EKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKA 368
Query: 411 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE 470
IAGEAG+PFF G++F EMFVGV A RV+ LF +++ AP IIFIDEIDA+GS R +
Sbjct: 369 IAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIFIDEIDAIGSKRGGPD 428
Query: 471 ---GHTKKT--LHQLLVEMDGFEQNEG-IILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
G ++ L Q+L EMDGF+ ++++ ATN DILDPAL R GRFD+ I V P
Sbjct: 429 IGGGGAEREQGLLQILTEMDGFKVTTSQVLVIGATNRLDILDPALLRKGRFDKIIRVGLP 488
Query: 525 DVRGRQEILELYLQDKPLADDVD----VKAIARGTPGFNGADLANLVNIAAIKAA---VD 577
GR IL+++ ++K + + ++ +A T F GA+L N++N A I A +D
Sbjct: 489 SKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGILTARKDLD 548
Query: 578 --GGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVA-FNTEGAHPIH 634
G E+L L+ K G E T + EE K AY E+ A++A + + PI
Sbjct: 549 YIGREELLEA-LKRQKGTFETGQEDSTE-VPEELKLRLAYREAAVAVLACYLPDQYRPIS 606
Query: 635 KATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSD 694
+ I S M S + + + + C RV EE +FG +++ ++
Sbjct: 607 ETDINSIRSQPNMRYSETSGRVFARKSDYVNSIIRAC-APRVVEEEMFGIENLCWISAKS 665
Query: 695 LHSATELAHYMVSNCGMSDAIGPVHIKDRPS--SEMQSRIDAEVVKLLREAYDRVKALLK 752
A++ A +++ GM+ A G + +++ + +++A + +R A ++ ++L+
Sbjct: 666 TLEASQRAEFLILQTGMT-AFGKAYYRNQRDLVPNLVPKLEALRDEYMRFAVEKCSSILQ 724
Query: 753 KHEKQLHALANALLEYETLSAEEIKRI 779
+++ L + + LLE + A+EI I
Sbjct: 725 EYQSALEEITDVLLEKGEIKADEIWNI 751
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 118/266 (44%), Positives = 168/266 (63%)
Query: 347 EVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
EV NV+ ++D+ G + QE+ EVVE LK+P F ++G + PKGILL G PGTGKT
Sbjct: 160 EVDERPNVR-YEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKT 218
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA+A E F GSE + F+G GA V+ +F+ AK+KAP IIFIDEIDA+ +
Sbjct: 219 LLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAK 278
Query: 466 RKQ----WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + ++TL QLL EMDGF+ + ++ ATN PDILDPA+ RPGRFDR I V
Sbjct: 279 RTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEV 338
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 581
P PD +GR EIL+++ + LA+DV+++ IA+ T G GA+L + A + A + +
Sbjct: 339 PAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDY 398
Query: 582 LTATELEFAKDRILMGTERKTMFISE 607
+T + A ++I+ E+K + + E
Sbjct: 399 VTMDDFRKAVEKIM---EKKKVKVKE 421
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 458 (166.3 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 97/241 (40%), Positives = 142/241 (58%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 193 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 251
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 252 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 311
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 312 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 371
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD+ +A+ T GF+GADL + A K A
Sbjct: 372 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQ-RACKLA 430
Query: 576 V 576
+
Sbjct: 431 I 431
Score = 319 (117.4 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 67/153 (43%), Positives = 96/153 (62%)
Query: 423 AGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTL-HQLL 481
+G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++ + QLL
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 61
Query: 482 VEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKP 541
MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+++ ++
Sbjct: 62 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMK 121
Query: 542 LADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
LADDVD++ + T G GADLA L + AA++A
Sbjct: 122 LADDVDLEQVGNETHGHVGADLAALCSEAALQA 154
Score = 43 (20.2 bits), Expect = 2.5e-45, Sum P(2) = 2.5e-45
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD-----SRGVVE 222
+E+ I D KQ A +++ N+ S + ++RF + D EVD + G +E
Sbjct: 52 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 111
Query: 223 YLRALVATNAITEYLPDEQSGKPT 246
L+ + + + EQ G T
Sbjct: 112 ILQIHTKNMKLADDVDLEQVGNET 135
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 466 (169.1 bits), Expect = 7.1e-44, P = 7.1e-44
Identities = 105/245 (42%), Positives = 150/245 (61%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
+F V G ++ +EL EV+E LKNP F R+G K PKG+LL G PGTGKTLLA+A+A
Sbjct: 130 SFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAAS 189
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT- 473
GV F S + ++G AR +R +F AK+ PC+IF+DEIDA+G R EG +
Sbjct: 190 LGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFS-EGTSA 248
Query: 474 ----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
++TL +LL +MDGF+ ++ ATN PD LDPAL RPGR DR I +P P+ GR
Sbjct: 249 DREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGR 308
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+++L+ ++D +A+ + T G NGADL N+V A A + + + ++L
Sbjct: 309 MEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMS 368
Query: 590 AKDRI 594
A ++
Sbjct: 369 AARKV 373
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 444 (161.4 bits), Expect = 8.7e-44, Sum P(2) = 8.7e-44
Identities = 101/257 (39%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ V G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 173 TYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 232
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 233 TECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGD 292
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P PD + R
Sbjct: 293 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARA 352
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L + + IA PG +GA++ ++ A + A + +T + E A
Sbjct: 353 QILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMA 412
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 413 VGKVMQKDSEKNMSIKK 429
Score = 44 (20.5 bits), Expect = 8.7e-44, Sum P(2) = 8.7e-44
Identities = 27/129 (20%), Positives = 54/129 (41%)
Query: 164 PFWRQE-KRIEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVE 222
P+++ + ++ EQ +AE + N + Q L+ + E + EQ H + ++
Sbjct: 48 PYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMD 107
Query: 223 YLRALVATNAITEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVM 282
+ LV + +Y+ D + + A + RA L P S+ PL +M
Sbjct: 108 KKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVL-P--SKVDPLVSLM 164
Query: 283 VDPKVSNKS 291
+ KV + +
Sbjct: 165 MVEKVPDST 173
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 463 (168.0 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 103/232 (44%), Positives = 144/232 (62%)
Query: 341 PKELNKEV----MPEKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGIL 395
P E + V + EK + + D+ G + QELVE +V + + +F +LG + PKG+L
Sbjct: 150 PSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVL 209
Query: 396 LTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIF 455
L G PGTGKTL+A+A A + F AG + +MF+G GA+ VR FQ AK+KAPCIIF
Sbjct: 210 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIF 269
Query: 456 IDEIDAVGSTRKQWE--G--HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTR 511
IDEIDA+G+ R E G ++T+ +LL ++DGF +E I ++AATN DILDPAL R
Sbjct: 270 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMR 329
Query: 512 PGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADL 563
GR DR I P+P R IL+++ + + DV+ + +AR T FNGA L
Sbjct: 330 SGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQL 381
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 445 (161.7 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 92/216 (42%), Positives = 139/216 (64%)
Query: 351 EKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E+ + + D+ GCD QEL+E VV + + +F LG PKG+L+ G PGTGKT++A+
Sbjct: 170 ERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMAR 229
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A+A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R
Sbjct: 230 AVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS 289
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
K + ++T+ +LL ++DGF+ N+ I ++AATN D+LDPAL R GR DR I +P+P+
Sbjct: 290 EKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPN 349
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGA 561
R I++++ + + DV+ + +AR T FNGA
Sbjct: 350 EDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGA 385
Score = 37 (18.1 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 182 NPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEV 215
NP+ + A+ E+ K S E + R D+E+
Sbjct: 12 NPEAMEVEDAIDEEILKMSTEDLKSRTHLLDNEI 45
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 445 (161.7 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 92/216 (42%), Positives = 139/216 (64%)
Query: 351 EKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E+ + + D+ GCD QEL+E VV + + +F LG PKG+L+ G PGTGKT++A+
Sbjct: 170 ERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMAR 229
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A+A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R
Sbjct: 230 AVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDS 289
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
K + ++T+ +LL ++DGF+ N+ I ++AATN D+LDPAL R GR DR I +P+P+
Sbjct: 290 EKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPN 349
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGA 561
R I++++ + + DV+ + +AR T FNGA
Sbjct: 350 EDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGA 385
Score = 37 (18.1 bits), Expect = 3.6e-43, Sum P(2) = 3.6e-43
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 182 NPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEV 215
NP+ + A+ E+ K S E + R D+E+
Sbjct: 12 NPEAMEVEDAIDEEILKMSTEDLKSRTHLLDNEI 45
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 455 (165.2 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 121/343 (35%), Positives = 180/343 (52%)
Query: 272 VSEKQPLHV-----VMVDPKVSNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIXXXX 326
++E+QPL V ++ D K S+KS++ + F V +G + +++ +
Sbjct: 91 MAEEQPLQVARCTKIIQDEKDSDKSKYVINVKQIAKFVVNLGE--RVSPTDIEEDLSHTD 148
Query: 327 XXXXXXXXXXXXYA-PKELNKEV----MPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNP 380
P +++ V + +K T+ DV GC + ++L EVVE L +P
Sbjct: 149 RLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPLLSP 208
Query: 381 SKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVR 440
+F LG PKG LL G PGTGKTL A+A+A F GSE + +VG GAR VR
Sbjct: 209 ERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVR 268
Query: 441 SLFQAAKKKAPCIIFIDEIDAVGSTRKQ----WEGHTKKTLHQLLVEMDGFEQNEGIILM 496
LF+ A+ K CIIF DEIDAVG R + ++T+ +L+ ++DGF+ I +M
Sbjct: 269 ELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDARGNIKVM 328
Query: 497 AATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTP 556
ATN P LDPAL RPGR DR I PDV GR IL ++ + + D+ + I+R P
Sbjct: 329 FATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERDIRWELISRLCP 388
Query: 557 GFNGADLANLVNIAAIKAAVDGGEKLTATELEF--AKDRILMG 597
GA+L ++ A + A+ K+ ATE +F A D+++ G
Sbjct: 389 NATGAELRSVATEAGM-FAIRARRKV-ATEKDFLAAVDKVIKG 429
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 455 (165.2 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 101/243 (41%), Positives = 141/243 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E+ TF + G + +EL EV+E LKNP F R+G K PKG+LL G PGTGKTLLAK
Sbjct: 174 EQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAK 233
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
A+A G F + S + ++G AR +R +F AK+ PCIIF+DE+DA+G R
Sbjct: 234 AVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFS- 292
Query: 470 EGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
EG + ++TL +LL +MDGF+ ++ ATN PD LDPAL RPGR DR + +P P
Sbjct: 293 EGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLP 352
Query: 525 DVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 584
+ GR EI +++ + D +A + + GFNGAD+ N A A D + +
Sbjct: 353 NEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINP 412
Query: 585 TEL 587
+L
Sbjct: 413 DDL 415
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 455 (165.2 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 102/257 (39%), Positives = 154/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ V G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 157 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHH 216
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 217 TECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGD 276
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILDPAL RPGR DR I P PD + R
Sbjct: 277 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARA 336
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L +++ IA PG +GA++ ++ A + A + +T + E A
Sbjct: 337 DILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMA 396
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 397 VGKVMQKDSEKNMSIKK 413
>TAIR|locus:2206380 [details] [associations]
symbol:FTSH12 "FTSH protease 12" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS;IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 HSSP:Q01853
eggNOG:COG0465 GO:GO:0009535 EMBL:AC007202 GO:GO:0004176 KO:K03798
EMBL:AY035166 IPI:IPI00518515 PIR:A96827 RefSeq:NP_565212.1
UniGene:At.48395 UniGene:At.66914 ProteinModelPortal:Q9SAJ3
SMR:Q9SAJ3 STRING:Q9SAJ3 MEROPS:M41.A06 PaxDb:Q9SAJ3 PRIDE:Q9SAJ3
EnsemblPlants:AT1G79560.1 GeneID:844294 KEGG:ath:AT1G79560
GeneFarm:1828 TAIR:At1g79560 HOGENOM:HOG000090030 InParanoid:Q9SAJ3
OMA:QAVIFIC PhylomeDB:Q9SAJ3 ProtClustDB:CLSN2689328
Genevestigator:Q9SAJ3 Uniprot:Q9SAJ3
Length = 1008
Score = 477 (173.0 bits), Expect = 1.4e-42, P = 1.4e-42
Identities = 127/407 (31%), Positives = 204/407 (50%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
+K+V D L E++ Y+ NP ++ +G+LL+G PGTGKTL A+ +A E+G
Sbjct: 492 YKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESG 551
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKT 476
+PF + +G+EF + GA ++ +F A++ AP +F+DEIDA+ + + + T
Sbjct: 552 LPFVFASGAEFTDSEKS-GAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRAT 610
Query: 477 LHQLLVEMDGFEQNEGI---------ILMAATNLPDILDPALTRPGRFDRHIVVPNPDVR 527
L+ ++DG ++ GI I + ATN PD LD R GR DR + + PD +
Sbjct: 611 FEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAK 670
Query: 528 GRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATEL 587
R +I ++ K LA+D+D + T GF+GAD+ NLVN AAI + G + ++
Sbjct: 671 QRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDI 730
Query: 588 EFAKDRIL---MG---TERKTM----FISEESKKLTAYHESGHAIVA--FNTEGAHPIHK 635
D+ L MG TE + +S E K+L A HE+GH ++A F H +
Sbjct: 731 VDVLDKQLLEGMGVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQ 790
Query: 636 ATIMPRGSALGMVTQLPSSDETSVSQKQ---LLARLDVCMGGRVAEELIFGRDHITTGAS 692
++P G + P D + ++ V GGR AE ++FG D++T G
Sbjct: 791 --LLPGGKETAVSVFYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFG-DNVTDGGK 847
Query: 693 SDLHSATELAHYMVSNCGMSDAIGPVH-IKDRPSSEMQSRIDAEVVK 738
DL T++A MV + S +G +K ++ D E++K
Sbjct: 848 DDLEKITKIAREMVIS-PQSARLGLTQLVKKIGMVDLPDNPDGELIK 893
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 454 (164.9 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 134/415 (32%), Positives = 204/415 (49%)
Query: 178 EANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYL 237
E A D A+Q + E+ K S E +I+R D E+ E LR A+ + +
Sbjct: 15 EKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS-EVLRVTHELQAMKDKI 73
Query: 238 PD--EQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQ 295
+ E+ TLP L+ + ++P E+ ++ + D + K +
Sbjct: 74 KENSEKIKVNKTLPYLVSNVIELLD-------VDPNDQEEDGANIDL-DSQRKGKCAVIK 125
Query: 296 ELISTILFTVAVGLVWLMGAAALQK--YIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
F +GLV A L+ + Y + EV E+
Sbjct: 126 TSTRQTYFLPVIGLV---DAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV-DERP 181
Query: 354 VKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
+ + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+A A
Sbjct: 182 TEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 241
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQ 468
+ F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R K
Sbjct: 242 AQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA 301
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
+ ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 302 GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A + A G +LT
Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 416
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 454 (164.9 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 134/415 (32%), Positives = 204/415 (49%)
Query: 178 EANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYL 237
E A D A+Q + E+ K S E +I+R D E+ E LR A+ + +
Sbjct: 15 EKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS-EVLRVTHELQAMKDKI 73
Query: 238 PD--EQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQ 295
+ E+ TLP L+ + ++P E+ ++ + D + K +
Sbjct: 74 KENSEKIKVNKTLPYLVSNVIELLD-------VDPNDQEEDGANIDL-DSQRKGKCAVIK 125
Query: 296 ELISTILFTVAVGLVWLMGAAALQK--YIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
F +GLV A L+ + Y + EV E+
Sbjct: 126 TSTRQTYFLPVIGLV---DAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV-DERP 181
Query: 354 VKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
+ + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+A A
Sbjct: 182 TEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 241
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQ 468
+ F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R K
Sbjct: 242 AQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA 301
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
+ ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 302 GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A + A G +LT
Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 416
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 453 (164.5 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 100/255 (39%), Positives = 147/255 (57%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ D+ GC + ++L EVVE L P +F LG PKG+LL G PGTGKTL A+
Sbjct: 155 EKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTAR 214
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
AIA F GSE + +VG GAR VR LFQ AK K CI+FIDE+DA+G +R
Sbjct: 215 AIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDE 274
Query: 470 EGH----TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
H ++T+ +++ ++DGF+ I ++ ATN PD LD AL RPGR DR I PD
Sbjct: 275 SAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPD 334
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ ++ DV + +AR P G+D+ ++ A + A + +T
Sbjct: 335 LEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEK 394
Query: 586 ELEFAKDRILMGTER 600
+L A ++++ G ++
Sbjct: 395 DLLLAINKVIHGCKQ 409
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 453 (164.5 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 133/415 (32%), Positives = 204/415 (49%)
Query: 178 EANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYL 237
E A D A+Q + E+ K S E +++R D E+ E LR A+ + +
Sbjct: 22 EKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKS-EVLRVTHELQAMKDKI 80
Query: 238 PD--EQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQ 295
+ E+ TLP L+ + ++P E+ ++ + D + K +
Sbjct: 81 KENSEKIKVNKTLPYLVSNVIELLD-------VDPNDQEEDGANIDL-DSQRKGKCAVIK 132
Query: 296 ELISTILFTVAVGLVWLMGAAALQK--YIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
F +GLV A L+ + Y + EV E+
Sbjct: 133 TSTRQTYFLPVIGLV---DAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV-DERP 188
Query: 354 VKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
+ + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+A A
Sbjct: 189 TEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 248
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQ 468
+ F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R K
Sbjct: 249 AQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA 308
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
+ ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 309 GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 368
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A + A G +LT
Sbjct: 369 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 423
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 453 (164.5 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 100/255 (39%), Positives = 147/255 (57%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ D+ GC + ++L EVVE L P +F LG PKG+LL G PGTGKTL A+
Sbjct: 155 EKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTAR 214
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
AIA F GSE + +VG GAR VR LFQ AK K CI+FIDE+DA+G +R
Sbjct: 215 AIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDE 274
Query: 470 EGH----TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
H ++T+ +++ ++DGF+ I ++ ATN PD LD AL RPGR DR I PD
Sbjct: 275 SAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPD 334
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ ++ DV + +AR P G+D+ ++ A + A + +T
Sbjct: 335 LEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTITEK 394
Query: 586 ELEFAKDRILMGTER 600
+L A ++++ G ++
Sbjct: 395 DLLLAINKVIHGCKQ 409
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 453 (164.5 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 133/415 (32%), Positives = 204/415 (49%)
Query: 178 EANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYL 237
E A D A+Q + E+ K S E +++R D E+ E LR A+ + +
Sbjct: 18 EKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKS-EVLRVTHELQAMKDKI 76
Query: 238 PD--EQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQ 295
+ E+ TLP L+ + ++P E+ ++ + D + K +
Sbjct: 77 KENSEKIKVNKTLPYLVSNVIELLD-------VDPNDQEEDGANIDL-DSQRKGKCAVIK 128
Query: 296 ELISTILFTVAVGLVWLMGAAALQK--YIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
F +GLV A L+ + Y + EV E+
Sbjct: 129 TSTRQTYFLPVIGLV---DAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV-DERP 184
Query: 354 VKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
+ + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+A A
Sbjct: 185 TEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 244
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQ 468
+ F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R K
Sbjct: 245 AQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA 304
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
+ ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 305 GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 364
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A + A G +LT
Sbjct: 365 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 419
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 453 (164.5 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 133/415 (32%), Positives = 204/415 (49%)
Query: 178 EANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYL 237
E A D A+Q + E+ K S E +++R D E+ E LR A+ + +
Sbjct: 15 EKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKS-EVLRVTHELQAMKDKI 73
Query: 238 PD--EQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQ 295
+ E+ TLP L+ + ++P E+ ++ + D + K +
Sbjct: 74 KENSEKIKVNKTLPYLVSNVIELLD-------VDPNDQEEDGANIDL-DSQRKGKCAVIK 125
Query: 296 ELISTILFTVAVGLVWLMGAAALQK--YIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
F +GLV A L+ + Y + EV E+
Sbjct: 126 TSTRQTYFLPVIGLV---DAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV-DERP 181
Query: 354 VKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
+ + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+A A
Sbjct: 182 TEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 241
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQ 468
+ F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R K
Sbjct: 242 AQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA 301
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
+ ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 302 GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A + A G +LT
Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 416
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 453 (164.5 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 133/415 (32%), Positives = 204/415 (49%)
Query: 178 EANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYL 237
E A D A+Q + E+ K S E +++R D E+ E LR A+ + +
Sbjct: 18 EKMATVWDEAEQDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKS-EVLRVTHELQAMKDKI 76
Query: 238 PD--EQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQ 295
+ E+ TLP L+ + ++P E+ ++ + D + K +
Sbjct: 77 KENSEKIKVNKTLPYLVSNVIELLD-------VDPNDQEEDGANIDL-DSQRKGKCAVIK 128
Query: 296 ELISTILFTVAVGLVWLMGAAALQK--YIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
F +GLV A L+ + Y + EV E+
Sbjct: 129 TSTRQTYFLPVIGLV---DAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV-DERP 184
Query: 354 VKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
+ + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+A A
Sbjct: 185 TEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 244
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQ 468
+ F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R K
Sbjct: 245 AQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA 304
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
+ ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 305 GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 364
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A + A G +LT
Sbjct: 365 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 419
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 470 (170.5 bits), Expect = 4.1e-42, P = 4.1e-42
Identities = 99/220 (45%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 460 (167.0 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 97/241 (40%), Positives = 143/241 (59%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD++ +A+ T GF+GADL + A K A
Sbjct: 640 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ-RACKLA 698
Query: 576 V 576
+
Sbjct: 699 I 699
Score = 40 (19.1 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 368
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 470 (170.5 bits), Expect = 4.1e-42, P = 4.1e-42
Identities = 99/220 (45%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 460 (167.0 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 97/241 (40%), Positives = 143/241 (59%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD++ +A+ T GF+GADL + A K A
Sbjct: 640 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ-RACKLA 698
Query: 576 V 576
+
Sbjct: 699 I 699
Score = 40 (19.1 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 368
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 470 (170.5 bits), Expect = 4.1e-42, P = 4.1e-42
Identities = 99/220 (45%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 460 (167.0 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 97/241 (40%), Positives = 143/241 (59%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD++ +A+ T GF+GADL + A K A
Sbjct: 640 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ-RACKLA 698
Query: 576 V 576
+
Sbjct: 699 I 699
Score = 40 (19.1 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 368
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 470 (170.5 bits), Expect = 4.1e-42, P = 4.1e-42
Identities = 99/220 (45%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 460 (167.0 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 97/241 (40%), Positives = 143/241 (59%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD++ +A+ T GF+GADL + A K A
Sbjct: 640 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ-RACKLA 698
Query: 576 V 576
+
Sbjct: 699 I 699
Score = 40 (19.1 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 368
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 470 (170.5 bits), Expect = 4.1e-42, P = 4.1e-42
Identities = 99/220 (45%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 460 (167.0 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 97/241 (40%), Positives = 143/241 (59%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD++ +A+ T GF+GADL + A K A
Sbjct: 640 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ-RACKLA 698
Query: 576 V 576
+
Sbjct: 699 I 699
Score = 40 (19.1 bits), Expect = 9.1e-41, Sum P(2) = 9.1e-41
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 368
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 470 (170.5 bits), Expect = 4.1e-42, P = 4.1e-42
Identities = 99/220 (45%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 457 (165.9 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 96/241 (39%), Positives = 143/241 (59%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL ++V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPQV-TWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD++ +A+ T GF+GADL + A K A
Sbjct: 640 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ-RACKLA 698
Query: 576 V 576
+
Sbjct: 699 I 699
Score = 40 (19.1 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 368
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 470 (170.5 bits), Expect = 4.2e-42, P = 4.2e-42
Identities = 99/220 (45%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 449 (163.1 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 97/243 (39%), Positives = 143/243 (58%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLAD--DVDVKAIARGTPGFNGADLANLVNIAAIK 573
D+ I +P PD + R IL+ L+ P+A DVD++ +A+ T GF+GADL + A K
Sbjct: 640 DQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQ-RACK 698
Query: 574 AAV 576
A+
Sbjct: 699 LAI 701
Score = 40 (19.1 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 368
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 450 (163.5 bits), Expect = 4.5e-42, P = 4.5e-42
Identities = 100/254 (39%), Positives = 151/254 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ V G D QE+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 141 TYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHH 200
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW---EG 471
F +GSE + F+G G+R VR LF A++ AP IIF+DEID++GS R + +
Sbjct: 201 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTGDS 260
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++T+ +LL ++DGFE + I ++ ATN D+LD AL RPGR DR I P P+ R +
Sbjct: 261 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLD 320
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 321 ILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 380
Query: 592 DRILMGTERKTMFI 605
+++M K M I
Sbjct: 381 SKVMMKDSEKNMSI 394
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 450 (163.5 bits), Expect = 4.5e-42, P = 4.5e-42
Identities = 103/247 (41%), Positives = 153/247 (61%)
Query: 347 EVMPEKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
EV+ EK + + D+ G D ++LVE +V + + KF ++G K PKG+L+ G PGTGKT
Sbjct: 176 EVI-EKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKT 234
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLA+A A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+
Sbjct: 235 LLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTK 294
Query: 466 R--KQWEG--HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + G ++T+ +LL ++DGF ++ + ++AATN PD LDPAL R GR DR I +
Sbjct: 295 RFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIEL 354
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 581
P+P+ R IL+++ + + DV+ + +AR T FNGA L V + A A+ G
Sbjct: 355 PHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQL-KAVCVEAGMIALRRG-- 411
Query: 582 LTATELE 588
ATE++
Sbjct: 412 --ATEID 416
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 450 (163.5 bits), Expect = 4.5e-42, P = 4.5e-42
Identities = 103/247 (41%), Positives = 153/247 (61%)
Query: 347 EVMPEKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
EV+ EK + + D+ G D ++LVE +V + + KF ++G K PKG+L+ G PGTGKT
Sbjct: 176 EVI-EKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKT 234
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLA+A A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+
Sbjct: 235 LLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTK 294
Query: 466 R--KQWEG--HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R + G ++T+ +LL ++DGF ++ + ++AATN PD LDPAL R GR DR I +
Sbjct: 295 RFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIEL 354
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 581
P+P+ R IL+++ + + DV+ + +AR T FNGA L V + A A+ G
Sbjct: 355 PHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQL-KAVCVEAGMIALRRG-- 411
Query: 582 LTATELE 588
ATE++
Sbjct: 412 --ATEID 416
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 450 (163.5 bits), Expect = 4.5e-42, P = 4.5e-42
Identities = 105/257 (40%), Positives = 148/257 (57%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC D ++L EVVE L +P +F LG PKGILL G PGTGKTL A+
Sbjct: 202 EKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCAR 261
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K CIIF DEIDAVG R
Sbjct: 262 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDD 321
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I +M ATN P+ LDPAL RPGR DR + PD
Sbjct: 322 GAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPD 381
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I ++ + + + + I+R P GA+L ++ A + A+ K+ AT
Sbjct: 382 LEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGM-FAIRARRKV-AT 439
Query: 586 ELEFAK--DRILMGTER 600
E +F K D+++ G ++
Sbjct: 440 EKDFLKAVDKVISGYKK 456
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 470 (170.5 bits), Expect = 4.5e-42, P = 4.5e-42
Identities = 99/220 (45%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 219 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 278
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 279 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 338
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 339 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 398
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 399 IHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 438
Score = 460 (167.0 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 97/241 (40%), Positives = 143/241 (59%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 477 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 535
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 536 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 595
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 596 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 655
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD++ +A+ T GF+GADL + A K A
Sbjct: 656 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQ-RACKLA 714
Query: 576 V 576
+
Sbjct: 715 I 715
Score = 40 (19.1 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 336 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 384
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 434 (157.8 bits), Expect = 5.2e-42, Sum P(2) = 5.2e-42
Identities = 98/258 (37%), Positives = 152/258 (58%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T+ V G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 143 TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 202
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ-----W 469
F +GSE + ++G G+R VR LF A++ AP IIF+DEID++GS+R +
Sbjct: 203 TDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGG 262
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
+ ++T+ +LL ++DGFE + I ++ TN DILDPAL RPGR DR I PNP GR
Sbjct: 263 DSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGR 322
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+IL+++ + L +++K I+ G +GA+L + A + A + ++ + E
Sbjct: 323 LDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEM 382
Query: 590 AKDRILMGTERKTMFISE 607
A +++ + M I++
Sbjct: 383 AVSKVMKKDSEQNMSINK 400
Score = 38 (18.4 bits), Expect = 5.2e-42, Sum P(2) = 5.2e-42
Identities = 28/118 (23%), Positives = 47/118 (39%)
Query: 171 RIEQLIAEANANPKDPAKQTALLSELN---KQSPEAVIKRFEQRDHEVDSRGVVEYLRAL 227
+IE+L + N +D + A +ELN + E + H + ++ + L
Sbjct: 23 KIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKNKVL 82
Query: 228 VATNAITEYL----PDEQSGK--PTTLPALLQELQ--HRASRNTNEPFLNPGVSEKQP 277
V N +++ P K P+T AL E HR N +P ++ EK P
Sbjct: 83 VKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIP 140
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 449 (163.1 bits), Expect = 5.8e-42, P = 5.8e-42
Identities = 101/249 (40%), Positives = 147/249 (59%)
Query: 341 PKELNKEV----MPEKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGIL 395
P E + V + EK +T+ DV G D +ELVE +V +K KF +G + PKG L
Sbjct: 160 PSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGAL 219
Query: 396 LTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIF 455
+ G PGTGKTLLA+A A + F A + +M++G GA+ VR F AK+KAP IIF
Sbjct: 220 MYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIF 279
Query: 456 IDEIDAVGSTR----KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTR 511
IDE+DA+G+ R K + ++T+ +LL ++DGF ++ + ++AATN D+LDPAL R
Sbjct: 280 IDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLR 339
Query: 512 PGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAA 571
GR DR I P P R +IL+++ + DD++ + +AR T FNGA L V + A
Sbjct: 340 SGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQL-KAVTVEA 398
Query: 572 IKAAVDGGE 580
A+ G+
Sbjct: 399 GMIALRNGQ 407
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 448 (162.8 bits), Expect = 7.5e-42, P = 7.5e-42
Identities = 102/254 (40%), Positives = 147/254 (57%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F +LG PKGILL G PGTGKTL A+
Sbjct: 179 EKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCAR 238
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K CIIF DE+DA+G R
Sbjct: 239 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDD 298
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I +M ATN P+ LDPAL RPGR DR + PD
Sbjct: 299 GAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPD 358
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I ++ + + D+ + I+R P GA+L ++ A + A+ K+ A
Sbjct: 359 LEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGM-FAIRARRKV-AN 416
Query: 586 ELEFAK--DRILMG 597
E +F K D+++ G
Sbjct: 417 EKDFLKAVDKVIKG 430
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 448 (162.8 bits), Expect = 7.5e-42, P = 7.5e-42
Identities = 102/252 (40%), Positives = 146/252 (57%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+KDV GC + ++L EVVE L +P KF LG PKG+L+ G PGTGKTL A+
Sbjct: 163 EKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCAR 222
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LFQ A+ K CIIF DE+DA+G R
Sbjct: 223 AVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDD 282
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR + PD
Sbjct: 283 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 342
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I ++ + A D+ + +AR P GAD+ ++ A + A+ K+ +
Sbjct: 343 LEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGM-FAIRARRKVVS- 400
Query: 586 ELEF--AKDRIL 595
E +F A D+++
Sbjct: 401 EKDFLEAIDKVI 412
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 447 (162.4 bits), Expect = 9.8e-42, P = 9.8e-42
Identities = 102/254 (40%), Positives = 150/254 (59%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC D ++L EVVE L +P ++ LG + PKG+LL G PGTGKTL A+
Sbjct: 170 EKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCAR 229
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDAVG R
Sbjct: 230 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDD 289
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ + ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR + PD
Sbjct: 290 GQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPD 349
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR IL+++ + + D+ +AR P GA++ ++ A + A+ K+ AT
Sbjct: 350 LAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGM-FAIRARRKV-AT 407
Query: 586 ELEF--AKDRILMG 597
E +F A ++++ G
Sbjct: 408 EKDFLEAINKVVKG 421
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 447 (162.4 bits), Expect = 9.8e-42, P = 9.8e-42
Identities = 102/254 (40%), Positives = 150/254 (59%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC D ++L EVVE L +P ++ LG + PKG+LL G PGTGKTL A+
Sbjct: 170 EKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCAR 229
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDAVG R
Sbjct: 230 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDD 289
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ + ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR + PD
Sbjct: 290 GQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPD 349
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR IL+++ + + D+ +AR P GA++ ++ A + A+ K+ AT
Sbjct: 350 LAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGM-FAIRARRKV-AT 407
Query: 586 ELEF--AKDRILMG 597
E +F A ++++ G
Sbjct: 408 EKDFLEAINKVVKG 421
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 431 (156.8 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 97/244 (39%), Positives = 145/244 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ V G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 177 TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHH 236
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE---G 471
F +GSE + ++G G+R VR LF A++ AP IIF+DEID++GS R + E
Sbjct: 237 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDS 296
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++T+ +LL ++DGFE + I ++ TN DILD AL RPGR DR I PNP+V R E
Sbjct: 297 EVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARME 356
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++ + L +D+ IA +GA++ + A + A + +T + E A
Sbjct: 357 ILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAV 416
Query: 592 DRIL 595
+++
Sbjct: 417 AKVM 420
Score = 38 (18.4 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 172 IEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRF-EQRDHEVDS 217
I+ I+E N + S LN++ ++ IKR+ E + E +S
Sbjct: 17 IKNEISEKNMENNNNNDNNKNSSALNEEQVQSGIKRYYELKIEEYES 63
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 431 (156.8 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 97/244 (39%), Positives = 145/244 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ V G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 177 TYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHH 236
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE---G 471
F +GSE + ++G G+R VR LF A++ AP IIF+DEID++GS R + E
Sbjct: 237 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHGDS 296
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++T+ +LL ++DGFE + I ++ TN DILD AL RPGR DR I PNP+V R E
Sbjct: 297 EVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARME 356
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++ + L +D+ IA +GA++ + A + A + +T + E A
Sbjct: 357 ILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAV 416
Query: 592 DRIL 595
+++
Sbjct: 417 AKVM 420
Score = 38 (18.4 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 172 IEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRF-EQRDHEVDS 217
I+ I+E N + S LN++ ++ IKR+ E + E +S
Sbjct: 17 IKNEISEKNMENNNNNDNNKNSSALNEEQVQSGIKRYYELKIEEYES 63
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 455 (165.2 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 102/224 (45%), Positives = 139/224 (62%)
Query: 356 TFKDVKGCDDAKQEL-VEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T+ D+ + ++EL + V+ +K P RLG P G+LL G PG GKTLLAKAIA E
Sbjct: 660 TWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANE 719
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW-EGHT 473
AG+ F G E M+VG R VR+ FQ A+ APC+IF DE D++ R +G+
Sbjct: 720 AGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGGDGNN 779
Query: 474 KKT--LHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
T ++QLL EMDG E+ +G+ ++AATN PDI+DPA+ RPGR D + V P+ R E
Sbjct: 780 SGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPEQSERTE 839
Query: 532 ILELYLQD--KP-LADDVDVKAIARGTPGFNGADLANLVNIAAI 572
IL+ ++ +P LADDVD+ IA T G+ GADLA LV A++
Sbjct: 840 ILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASM 883
Score = 385 (140.6 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 90/258 (34%), Positives = 144/258 (55%)
Query: 342 KELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLP-KGILLTGAP 400
++ +++ + ++F+D+ G D +EL E++ ++K+P + +LG LP +G+LL G P
Sbjct: 235 RKFKRDLEVQHPTESFRDIGGMDSTLKELCEMLIHIKSPEFYFQLG-LLPSRGLLLHGPP 293
Query: 401 GTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEID 460
G GKT LA+AI+G+ +P +E G R+R +F A +PC++FIDEID
Sbjct: 294 GCGKTFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEID 353
Query: 461 AVGSTRKQWEGHT--KKTLHQLLVEMDGFEQNE---GIILMAATNLPDILDPALTRPGRF 515
A+G R QW ++ + QL+ +D + NE ++++AAT PD+LDP L R GRF
Sbjct: 354 AIGGNR-QWASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRF 412
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D I + P + R+EIL + + + ++ IA TPG+ GADL LV+ AA A
Sbjct: 413 DHEIAIHIPSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAA-SVA 471
Query: 576 VDGGEKLTATELEFAKDR 593
V EL A ++
Sbjct: 472 VKRRSMKKFRELHAASEK 489
Score = 59 (25.8 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 25/97 (25%), Positives = 40/97 (41%)
Query: 177 AEANANPKDPAKQTALLSELNKQSPEAVI---KRFEQRDHEVDSRGVVEYLRALV---AT 230
A A P PA Q + L L ++ PE + K + V S ++ L +V A
Sbjct: 143 AAAAPPPPTPAVQGSALKRLMEEVPEIAVAAKKVAKPNTIHVSSSEAIQKLHQVVGNRAK 202
Query: 231 NAITEYLPDEQSGKPTTLPALLQELQHRASRNTNEPF 267
N + +P + + +P L Q+L SR+ F
Sbjct: 203 NLSEDAVPRSKDHR--NVPGLYQQLHQNQSRDRLRKF 237
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 446 (162.1 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 99/237 (41%), Positives = 141/237 (59%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK + + D+ G D +E+VE + + +K +F +LG K PKG L+ G PGTGKTLLA+
Sbjct: 204 EKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLAR 263
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A A E F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DAVG+ R
Sbjct: 264 ACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDS 323
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
K + ++T+ +LL ++DGF ++ I ++AATN D+LDPAL R GR DR I P P+
Sbjct: 324 EKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPN 383
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
R IL+++ + + D V+ +AR T F GA L + A + A G K+
Sbjct: 384 EEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKGHSKI 440
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 446 (162.1 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 100/244 (40%), Positives = 144/244 (59%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR IL+++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 446 (162.1 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 100/232 (43%), Positives = 143/232 (61%)
Query: 341 PKELNKEV----MPEKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGIL 395
P E + V + EK + + D+ G + QELVE +V + + +F +LG + PKG+L
Sbjct: 149 PSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVL 208
Query: 396 LTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIF 455
L G PGTGKTL+A+A A + F AG + +MF+G GA+ VR F AK+K+PCIIF
Sbjct: 209 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIF 268
Query: 456 IDEIDAVGSTRKQWE--G--HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTR 511
IDEIDA+G+ R E G ++T+ +LL ++DGF ++ I ++AATN DILDPAL R
Sbjct: 269 IDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMR 328
Query: 512 PGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADL 563
GR DR I P+P R IL+++ + + DV+ + +AR T FNGA L
Sbjct: 329 SGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQL 380
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 465 (168.7 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 98/220 (44%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ L+DDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 461 (167.3 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 98/241 (40%), Positives = 142/241 (58%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVDV +A+ T GF+GADL + A K A
Sbjct: 640 DQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQ-RACKLA 698
Query: 576 V 576
+
Sbjct: 699 I 699
Score = 41 (19.5 bits), Expect = 5.4e-41, Sum P(2) = 5.4e-41
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD-----SRGVVE 222
+E+ I D KQ A +++ N+ S + ++RF + D EVD S G +E
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLE 379
Query: 223 YLRALVATNAITEYLPDEQSGKPT 246
L+ +++ + EQ T
Sbjct: 380 ILQIHTKNMKLSDDVDLEQVANET 403
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 465 (168.7 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 98/220 (44%), Positives = 140/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ L+DDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 457 (165.9 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 97/241 (40%), Positives = 142/241 (58%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD+ +A+ T GF+GADL + A K A
Sbjct: 640 DQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQ-RACKLA 698
Query: 576 V 576
+
Sbjct: 699 I 699
Score = 41 (19.5 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD-----SRGVVE 222
+E+ I D KQ A +++ N+ S + ++RF + D EVD S G +E
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLE 379
Query: 223 YLRALVATNAITEYLPDEQSGKPT 246
L+ +++ + EQ T
Sbjct: 380 ILQIHTKNMKLSDDVDLEQVANET 403
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 445 (161.7 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 97/246 (39%), Positives = 147/246 (59%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+++ D+ G + QE+ E VE L +P + +G K PKG++L GAPGTGKTLLAKA+A
Sbjct: 183 ESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 242
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G R R +FQ A AP I+FIDEIDA+G+ R +
Sbjct: 243 QTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGG 302
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ I ++ ATN + LDPAL RPGR DR I+ NPD +
Sbjct: 303 EREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANTK 362
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
++IL ++ LADDV++ I G +GAD+ + A + A + ++ A + +
Sbjct: 363 KKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKAEDFKS 422
Query: 590 AKDRIL 595
AK+R+L
Sbjct: 423 AKERVL 428
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 445 (161.7 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 100/238 (42%), Positives = 140/238 (58%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
+F + G + +EL EV+E LKNP FTR+G K PKG+LL G PGTGKTLLAKA+A
Sbjct: 170 SFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 229
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT- 473
G F + S + ++G AR +R +F AK+ PCIIF+DE+DA+G R EG +
Sbjct: 230 IGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFS-EGTSA 288
Query: 474 ----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
++TL +LL +MDGF+ ++ ATN PD LDPAL R GR DR I + P+ GR
Sbjct: 289 DREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGR 348
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATEL 587
EI +++ + D +A + + GFNGAD+ N+V A A D + + +L
Sbjct: 349 LEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDL 406
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 445 (161.7 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 100/257 (38%), Positives = 153/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ V G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 205
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----WE 470
F +GSE + F+G G+R VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 206 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 265
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILDPAL RPGR DR I P P+ R
Sbjct: 266 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 325
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 326 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 385
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 386 VAKVMQKDSEKNMSIKK 402
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 445 (161.7 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 94/247 (38%), Positives = 148/247 (59%)
Query: 354 VKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
++++ D+ G + QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 189 LESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVA 248
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ---- 468
E F GSE + ++G G + VR +F+ A++ AP I+FIDEIDAVG+ R +
Sbjct: 249 NETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSG 308
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
E ++T+ +LL ++DGF+ + ++ ATN D LDPAL RPGR DR I +PNPD +
Sbjct: 309 GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKT 368
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ I +++ ++ DVD++ +GAD+ + A + A + K+T +L
Sbjct: 369 KRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLR 428
Query: 589 FAKDRIL 595
A+D+ L
Sbjct: 429 KARDKAL 435
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 445 (161.7 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 94/247 (38%), Positives = 148/247 (59%)
Query: 354 VKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
++++ D+ G + QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 189 LESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVA 248
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ---- 468
E F GSE + ++G G + VR +F+ A++ AP I+FIDEIDAVG+ R +
Sbjct: 249 NETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSG 308
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
E ++T+ +LL ++DGF+ + ++ ATN D LDPAL RPGR DR I +PNPD +
Sbjct: 309 GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKT 368
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ I +++ ++ DVD++ +GAD+ + A + A + K+T +L
Sbjct: 369 KRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLR 428
Query: 589 FAKDRIL 595
A+D+ L
Sbjct: 429 KARDKAL 435
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 465 (168.7 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 100/240 (41%), Positives = 143/240 (59%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ NV+ ++D+ G ++ K+EL E V+ + KF R G KG+L G
Sbjct: 481 PSALRETVVEVPNVR-WEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGP 539
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PGTGKTLLAKAIA E F G E M+ G VR +F A+ APC++F+DE+
Sbjct: 540 PGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDEL 599
Query: 460 DAVGSTRKQWEGHT---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFD 516
D++ R G + + ++QLL EMDG + + ++ ATN PD +DPAL RPGR D
Sbjct: 600 DSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLD 659
Query: 517 RHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAV 576
+ I VP PD R IL+ L+ P+A+DVD++A+A+ T GF+GADL +V A+K A+
Sbjct: 660 QLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQ-RAVKLAI 718
Score = 454 (164.9 bits), Expect = 3.2e-40, P = 3.2e-40
Identities = 95/219 (43%), Positives = 138/219 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P F +G K P+GIL+ G PGTGKTL+A+A+A E
Sbjct: 223 YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 282
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-K 474
G FF G E G +R F+ A+K +P IIFIDEID++ R++ G +
Sbjct: 283 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 342
Query: 475 KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ + QLL MDG + +++MAATN P+ +DPAL R GRFDR + V PD GR EIL
Sbjct: 343 RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILR 402
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIK 573
++ ++ LADDVD++ IA T G+ G+DLA+L + AA++
Sbjct: 403 IHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQ 441
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 444 (161.4 bits), Expect = 2.1e-41, P = 2.1e-41
Identities = 101/246 (41%), Positives = 146/246 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ V G + +E+ EV+E +K+P F LG PKGILL G PGTGKTLLA+A+A
Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG--- 471
F +GSE + ++G G+R VR LF A++ AP IIF+DEID++GS+R G
Sbjct: 203 TDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSG 262
Query: 472 --HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
++T+ +LL ++DGFE + I ++ ATN DILDPAL RPGR DR I P P R
Sbjct: 263 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEAR 322
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL ++ + L +D+K+IA G +GA+L + A + A + +T + E
Sbjct: 323 AEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFEL 382
Query: 590 AKDRIL 595
A ++L
Sbjct: 383 AVAKVL 388
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 465 (168.7 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 97/241 (40%), Positives = 143/241 (59%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ N+ T++D+ G DD K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 461 PSALRETVVEVPNI-TWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 519
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 520 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 579
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 580 DSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRL 639
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P++ DVD+ +A+ T GF+GADL + A K A
Sbjct: 640 DQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQ-RACKLA 698
Query: 576 V 576
+
Sbjct: 699 I 699
Score = 460 (167.0 bits), Expect = 6.2e-41, P = 6.2e-41
Identities = 98/220 (44%), Positives = 139/220 (63%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ G ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 322
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 323 RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ 382
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 383 IHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Score = 40 (19.1 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 320 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 368
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 464 (168.4 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 99/234 (42%), Positives = 144/234 (61%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P F +G K PKGIL+ G PGTGKT++A+A+A E
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-K 474
G FF G E G +R F+ A+K +P IIFIDEID++ R + G +
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVER 333
Query: 475 KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ + QLL MDG + ++++AATN P+ +DPAL R GRFDR + + PD GR EIL
Sbjct: 334 RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILR 393
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ++ LADDVD++AIA T GF GAD+A+L + AA++ EK+ +LE
Sbjct: 394 IHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQI---REKMDLIDLE 444
Score = 449 (163.1 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 108/294 (36%), Positives = 161/294 (54%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ NV T+ D+ G D+ K EL E VEY + +P ++ + G KG+L G
Sbjct: 472 PSALRETVVENVNV-TWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGP 530
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PGTGKTLLAKA+A E F G E M+ G +R +F A+ AP ++F+DE+
Sbjct: 531 PGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDEL 590
Query: 460 DAV----GSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ G + G + + ++QLL EMDG + + ++ ATN PD +DPAL RPGR
Sbjct: 591 DSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRL 650
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I VP PD R IL+ L++ PL +D+ IA+ T GF+GADL+ +V +A A
Sbjct: 651 DQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAI 710
Query: 576 VDGGE-KLTATELEFAKDRILMGTERKTMFISE-ESKKLTAYHESGHAIVAFNT 627
D E ++ +++ K+++ TE M + E E + Y H A T
Sbjct: 711 KDSIEAQVKINKIKEEKEKVK--TEDVDMKVDEVEEEDPVPYITRAHFEEAMKT 762
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 464 (168.4 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 99/234 (42%), Positives = 144/234 (61%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P F +G K PKGIL+ G PGTGKT++A+A+A E
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-K 474
G FF G E G +R F+ A+K +P IIFIDEID++ R + G +
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTNGEVER 333
Query: 475 KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ + QLL MDG + ++++AATN P+ +DPAL R GRFDR + + PD GR EIL
Sbjct: 334 RVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEILR 393
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ++ LADDVD++AIA T GF GAD+A+L + AA++ EK+ +LE
Sbjct: 394 IHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQI---REKMDLIDLE 444
Score = 449 (163.1 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 108/294 (36%), Positives = 161/294 (54%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ NV T+ D+ G D+ K EL E VEY + +P ++ + G KG+L G
Sbjct: 472 PSALRETVVENVNV-TWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGP 530
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PGTGKTLLAKA+A E F G E M+ G +R +F A+ AP ++F+DE+
Sbjct: 531 PGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDEL 590
Query: 460 DAV----GSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ G + G + + ++QLL EMDG + + ++ ATN PD +DPAL RPGR
Sbjct: 591 DSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRL 650
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I VP PD R IL+ L++ PL +D+ IA+ T GF+GADL+ +V +A A
Sbjct: 651 DQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAI 710
Query: 576 VDGGE-KLTATELEFAKDRILMGTERKTMFISE-ESKKLTAYHESGHAIVAFNT 627
D E ++ +++ K+++ TE M + E E + Y H A T
Sbjct: 711 KDSIEAQVKINKIKEEKEKVK--TEDVDMKVDEVEEEDPVPYITRAHFEEAMKT 762
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 426 (155.0 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 100/247 (40%), Positives = 140/247 (56%)
Query: 351 EKNVK-TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 408
EK K TF D+ GC+ QEL E VE L +P + +G PKG++L G PGTGKTLLA
Sbjct: 175 EKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLA 234
Query: 409 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR-- 466
KA+A F GS+ + G GAR VR +FQ AK++AP I+FIDEIDAVG+ R
Sbjct: 235 KAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFD 294
Query: 467 --KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
+ E ++TL +LL ++DGFE + ++ ATN D LDPAL RPGR DR I +P P
Sbjct: 295 TSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIELPKP 354
Query: 525 DVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 584
D + RQ+I ++ + V + + +GA++ + A + A+ K
Sbjct: 355 DEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGM-LALRAQRKCVG 413
Query: 585 TELEFAK 591
T+ +F K
Sbjct: 414 TD-DFEK 419
Score = 40 (19.1 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 22/80 (27%), Positives = 30/80 (37%)
Query: 176 IAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITE 235
I AN P K+ L+ L I + Q + E +R + R L +
Sbjct: 31 IENANKLPTVAPKRQCLVRLLKMNR----IHDYLQLEKEFITRQTSRHGRPLAVQKRREQ 86
Query: 236 YLPDEQSGKPTTLPALLQEL 255
L G PTTL A + EL
Sbjct: 87 QLVQSLRGTPTTL-ARVHEL 105
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 443 (161.0 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 99/227 (43%), Positives = 138/227 (60%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
F + G +D +EL EV+E LKNP F R+G K PKG+LL G PGTGKTLLA+A+A
Sbjct: 136 FAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSM 195
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-- 473
F S + ++G AR +R +F AK+ PCIIF+DEIDA+G R EG +
Sbjct: 196 ETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFS-EGTSAD 254
Query: 474 ---KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++TL +LL ++DGF+ ++ ATN PD LDPAL R GR DR I +P P+ GR
Sbjct: 255 REIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRL 314
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVD 577
EIL+++ + D+D +++ + + G NGADL N+V A + A D
Sbjct: 315 EILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKD 361
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 443 (161.0 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 99/238 (41%), Positives = 144/238 (60%)
Query: 351 EKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E+ + + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+
Sbjct: 125 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 184
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R
Sbjct: 185 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 244
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
K + ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 245 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 304
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A + A G +LT
Sbjct: 305 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 362
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 443 (161.0 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 99/238 (41%), Positives = 144/238 (60%)
Query: 351 EKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E+ + + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+
Sbjct: 129 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 188
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R
Sbjct: 189 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 248
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
K + ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 249 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 308
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A + A G +LT
Sbjct: 309 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 366
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 443 (161.0 bits), Expect = 2.7e-41, P = 2.7e-41
Identities = 99/238 (41%), Positives = 144/238 (60%)
Query: 351 EKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E+ + + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+
Sbjct: 137 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 196
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R
Sbjct: 197 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 256
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
K + ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 257 EKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 316
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A + A G +LT
Sbjct: 317 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELT 374
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 159 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 218
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 219 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 278
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 279 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 338
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 339 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 396
Query: 586 ELEF 589
E +F
Sbjct: 397 EKDF 400
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 167 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 226
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 227 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 286
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 287 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 346
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 347 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 404
Query: 586 ELEF 589
E +F
Sbjct: 405 EKDF 408
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 31 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 90
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 91 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 150
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 151 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 210
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 211 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 268
Query: 586 ELEF 589
E +F
Sbjct: 269 EKDF 272
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 210 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 269
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 270 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 329
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 330 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 389
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 390 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 447
Query: 586 ELEF 589
E +F
Sbjct: 448 EKDF 451
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 169 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 228
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 229 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 288
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 289 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 348
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 349 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 406
Query: 586 ELEF 589
E +F
Sbjct: 407 EKDF 410
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 97/257 (37%), Positives = 148/257 (57%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + +++ EVVE + +P KF +LG PKG+L G PGTGKTLLA+
Sbjct: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LFQ A+ K CI+F DE+DA+G R
Sbjct: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +++ ++DGF+ I ++ ATN PD LDPAL RPGR DR + PD
Sbjct: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ R +I +++ + D+ + +AR P GAD+ ++ A + A + T T
Sbjct: 341 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAI--RARRKTVT 398
Query: 586 ELEF--AKDRILMGTER 600
E +F A ++++ G ++
Sbjct: 399 EKDFLDAVNKVIKGYQK 415
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 442 (160.7 bits), Expect = 3.5e-41, P = 3.5e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 462 (167.7 bits), Expect = 3.8e-41, P = 3.8e-41
Identities = 95/231 (41%), Positives = 140/231 (60%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ NV +++D+ G ++ K+EL E V+Y +++P KF + G KG+L G
Sbjct: 465 PSALRETVVEVPNV-SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 523
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 524 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 583
Query: 460 DAVGSTRKQWEGHT----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ + R G + L+QLL EMDG + + ++ ATN PDI+DPAL RPGR
Sbjct: 584 DSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRL 643
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 566
D+ I +P PD R +I + L+ P+A DVD++A+A+ T GF+GAD+ +
Sbjct: 644 DQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEI 694
Score = 438 (159.2 bits), Expect = 2.2e-38, P = 2.2e-38
Identities = 97/234 (41%), Positives = 141/234 (60%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ DV G ++ E+VE L++P F +G K PKGILL G PG+GKTL+A+A+A E
Sbjct: 207 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 266
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDEID++ R++ G ++
Sbjct: 267 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER 326
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG + +I+M ATN P+ +DPAL R GRFDR I + PD GR E+L
Sbjct: 327 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 386
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ++ LA+DVD++ +++ T G+ GADLA L AA++ EK+ +L+
Sbjct: 387 IHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCI---REKMDVIDLD 437
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 153 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 212
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 213 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 272
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 273 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 332
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 333 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 392
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 393 VAKVMQKDSEKNMSIKK 409
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 387 VAKVMQKDSEKNMSIKK 403
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 387 VAKVMQKDSEKNMSIKK 403
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 387 VAKVMQKDSEKNMSIKK 403
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/238 (41%), Positives = 143/238 (60%)
Query: 351 EKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E+ + + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+
Sbjct: 144 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 203
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R
Sbjct: 204 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDS 263
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
K + ++T+ +LL ++DGF+ + ++AATN DILDPAL R GR DR I P P+
Sbjct: 264 EKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 323
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR T FNGA + A I A G +LT
Sbjct: 324 EEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELT 381
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKV-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 387 VAKVMQKDSEKNMSIKK 403
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 215 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 274
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 275 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 334
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 335 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 394
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 395 VAKVMQKDSEKNMSIKK 411
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 155 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 214
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 215 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 274
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 275 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 334
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 335 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 394
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 395 VAKVMQKDSEKNMSIKK 411
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 387 VAKVMQKDSEKNMSIKK 403
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 387 VAKVMQKDSEKNMSIKK 403
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/244 (40%), Positives = 143/244 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + ++L EVVE L +P +F LG + PKG+LL G PGTGKTL A+
Sbjct: 168 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 227
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R
Sbjct: 228 AVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDD 287
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR I PD
Sbjct: 288 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR I +++ + + D+ + +AR P GA++ ++ A + A+ K+ AT
Sbjct: 348 LEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGM-FAIRARRKI-AT 405
Query: 586 ELEF 589
E +F
Sbjct: 406 EKDF 409
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 441 (160.3 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 99/257 (38%), Positives = 152/257 (59%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R
Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 327 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMA 386
Query: 591 KDRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 387 VAKVMQKDSEKNMSIKK 403
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 461 (167.3 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 102/250 (40%), Positives = 147/250 (58%)
Query: 341 PKELNKEVMPE-KNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTG 398
P L + + E NV+ ++D+ G D+ KQ+L E V+Y + +P KF + G +G+L G
Sbjct: 479 PSALREVAVVEVPNVR-WEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYG 537
Query: 399 APGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDE 458
PGTGKT+LAKA+A E F G E M+ G +R +F A+ APCI+F+DE
Sbjct: 538 PPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDE 597
Query: 459 IDAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGR 514
+D++ R G + + ++QLL EMDG + + ++ ATN P+ LDPAL RPGR
Sbjct: 598 LDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGR 657
Query: 515 FDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
D I VP PD GR IL+ L+ P++DDVD++ IA T GF+GADL + A+K
Sbjct: 658 LDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLG-FITQRAVKI 716
Query: 575 AVDGGEKLTA 584
A+ E +TA
Sbjct: 717 AIK--ESITA 724
Score = 447 (162.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 92/219 (42%), Positives = 137/219 (62%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P F +G K P+G+LL G PGTGKTL+A+A+A E
Sbjct: 221 YDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANET 280
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-K 474
G FF G E G +R F+ A+K +P IIFIDEID++ R++ G +
Sbjct: 281 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 340
Query: 475 KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ + QLL MDG + +++MAATN P+ +DPAL R GRFDR + + PD GR EIL+
Sbjct: 341 RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQ 400
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIK 573
++ ++ L DDVD++ IA T G+ G+D+A L + AA++
Sbjct: 401 IHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQ 439
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 440 (159.9 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 101/231 (43%), Positives = 140/231 (60%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
++ V G D +EL E +E L NP F R+G K PKG+LL G PGTGKTLLA+AIA
Sbjct: 137 SYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASN 196
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT- 473
F S + ++G AR +R +F A++ PCIIF+DEIDA+G R EG +
Sbjct: 197 IDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS-EGTSA 255
Query: 474 ----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
++TL +LL ++DGF+Q + ++ ATN PD+LDPAL RPGR DR I +P P+ + R
Sbjct: 256 DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIA---AIKAAVD 577
EIL+++ ++D +AI + GFNGADL N+ A AI+A D
Sbjct: 316 MEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERD 366
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 460 (167.0 bits), Expect = 6.7e-41, P = 6.7e-41
Identities = 106/276 (38%), Positives = 159/276 (57%)
Query: 341 PKELNKEVMPE-KNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTG 398
P L + + E NV+ ++D+ G ++ K+EL+E V+Y + +P KF + G +G+L G
Sbjct: 482 PSALREVAVVEVPNVR-WEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYG 540
Query: 399 APGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDE 458
PGTGKT+LAKA+A E F G E M+ G +R +F A+ APC++F+DE
Sbjct: 541 PPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDE 600
Query: 459 IDAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGR 514
+D++ +R G + + ++QLL EMDG + + ++ ATN P+ LD AL RPGR
Sbjct: 601 LDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGR 660
Query: 515 FDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
D + VP PD R+ IL+ L+ P+A DVD++ IA T GF+GADL V A+K
Sbjct: 661 LDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLG-FVTQRAVKL 719
Query: 575 AVDGGEKLTATELEFAKDRILMGTERKTMFISEESK 610
A+ E ++A E+E K R G + K M EE +
Sbjct: 720 AIK--ESISA-EIERQKQREAAGEDVK-MEDEEEGE 751
Score = 447 (162.4 bits), Expect = 2.1e-39, P = 2.1e-39
Identities = 92/219 (42%), Positives = 137/219 (62%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P F +G K P+GIL+ G PGTGKTL+A+A+A E
Sbjct: 224 YDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 283
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-K 474
G FF G E G +R F+ A+K +P IIFIDEID++ R++ G +
Sbjct: 284 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 343
Query: 475 KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ + QLL MDG + +++MAATN P+ +DPAL R GRFDR + + PD GR EIL
Sbjct: 344 RVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILS 403
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIK 573
++ ++ L +DVD++ IA T G+ G+DLA+L + AA++
Sbjct: 404 IHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQ 442
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 439 (159.6 bits), Expect = 7.6e-41, P = 7.6e-41
Identities = 101/257 (39%), Positives = 150/257 (58%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T+ + G D +E+ EV+E LK+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 130 TYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 189
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG--- 471
F +GSE + ++G G+R VR LF A++ AP IIF+DEID++GS+R G
Sbjct: 190 TDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSGD 249
Query: 472 -HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE + I ++ ATN DILDPAL RPGR DR I P P V R
Sbjct: 250 SEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARA 309
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL ++ + L +++ IA G +GA+L + A + A + +T + + A
Sbjct: 310 DILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFDLA 369
Query: 591 KDRILMGTERKTMFISE 607
+IL + K + +S+
Sbjct: 370 TAKILNKHDDKEVAVSK 386
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 439 (159.6 bits), Expect = 7.6e-41, P = 7.6e-41
Identities = 132/415 (31%), Positives = 202/415 (48%)
Query: 178 EANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYL 237
E A D A+Q + E+ K S E +I+R D E+ E LR A+ + +
Sbjct: 10 EKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS-EVLRVTHELQAMKDKI 68
Query: 238 PD--EQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQ 295
+ E+ TLP L+ + ++P E+ ++ + D + K +
Sbjct: 69 KENSEKIKVNKTLPYLVSNVIELLD-------VHPNDQEEDGANIDL-DSQRKGKCAVIK 120
Query: 296 ELISTILFTVAVGLVWLMGAAALQK--YIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
F +GLV A L+ + Y + EV E+
Sbjct: 121 TSTRQTYFLPVIGLV---DAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV-DERP 176
Query: 354 VKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
+ + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+A A
Sbjct: 177 TEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACA 236
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQ 468
+ F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA G+ R K
Sbjct: 237 AQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDSEKA 296
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
+ ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR D+ I P P+
Sbjct: 297 GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEA 356
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
R I++++ + ++ DV+ + +AR FNGA + A + A G +LT
Sbjct: 357 RARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTTELT 411
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 438 (159.2 bits), Expect = 9.8e-41, P = 9.8e-41
Identities = 99/256 (38%), Positives = 150/256 (58%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T++ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 142 TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG--- 471
F +GSE + F+G GAR VR LF A++ AP IIF+DEID++GS + G
Sbjct: 202 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGGDS 261
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I P P+ R +
Sbjct: 262 EVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLD 321
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++ + L ++++ IA PG +GA++ + A + A + +T + E A
Sbjct: 322 ILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAV 381
Query: 592 DRILMGTERKTMFISE 607
+++ K M I +
Sbjct: 382 AKVMQKDSEKNMSIKK 397
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 438 (159.2 bits), Expect = 9.8e-41, P = 9.8e-41
Identities = 100/234 (42%), Positives = 142/234 (60%)
Query: 353 NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
NV ++ V G D +EL E +E L NP F R+G K PKG+LL G PGTGKTLLA+AI
Sbjct: 136 NV-SYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAI 194
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
A F S + ++G AR +R +F A+ PCIIF+DEIDA+G R EG
Sbjct: 195 ASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS-EG 253
Query: 472 HT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
+ ++TL +LL ++DGF++ + ++ ATN PD+LDPAL RPGR DR I +P P+
Sbjct: 254 TSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNE 313
Query: 527 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL---VNIAAIKAAVD 577
+ R E+L+++ ++D +A+ + GFNGADL N+ +AAI+A D
Sbjct: 314 QARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERD 367
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 438 (159.2 bits), Expect = 9.8e-41, P = 9.8e-41
Identities = 101/257 (39%), Positives = 146/257 (56%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK T+ DV GC + + L EVVE L +P +F +LG PKGI+L G PGTGKTL A+
Sbjct: 172 EKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCAR 231
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ- 468
A+A F GSE + +VG GAR VR LF+ A+ K CIIF DEIDA+G R
Sbjct: 232 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDD 291
Query: 469 ---WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ ++T+ +L+ ++DGF+ I ++ ATN P+ LD AL RPGR DR + PD
Sbjct: 292 GAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPD 351
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+ GR IL ++ + + D+ + IAR P GA+L ++ A + A + AT
Sbjct: 352 LEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAI--RARRRVAT 409
Query: 586 ELEF--AKDRILMGTER 600
E +F A +++ G ++
Sbjct: 410 EKDFLDAVQKVVKGNQK 426
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 458 (166.3 bits), Expect = 1.0e-40, P = 1.0e-40
Identities = 105/254 (41%), Positives = 152/254 (59%)
Query: 353 NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
N + D+ GC ++ E+VE L++PS F +G K P+GIL+ G PGTGKTL+A+A+
Sbjct: 196 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAV 255
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
A E G FF G E G +R F+ A+K +P IIFIDEIDA+ R + G
Sbjct: 256 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHG 315
Query: 472 HTKKTL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++ + QLL MDG +++ +I+MAATN P+ +DPAL R GRFDR I + PD GR
Sbjct: 316 EVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRL 375
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
E+L ++ ++ L DDVD++ IA + G GADLA+L + AA++ EK+ +LE
Sbjct: 376 EVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQI---REKMDLIDLEDD 432
Query: 591 K-DRILMGTERKTM 603
K D ++ + TM
Sbjct: 433 KIDAEVLASLAVTM 446
Score = 457 (165.9 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 103/284 (36%), Positives = 158/284 (55%)
Query: 340 APKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTG 398
+P L + V+ N T+ D+ G + K+EL E+V+Y +++P KF + G + +G+L G
Sbjct: 457 SPSALRETVVEVPNT-TWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYG 515
Query: 399 APGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDE 458
PG GKTLLAKAIA E F G E M+ G VR +F A+ APC++F DE
Sbjct: 516 PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDE 575
Query: 459 IDAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGR 514
+D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 576 LDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGR 635
Query: 515 FDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
D+ I +P PD + R+ IL+ L+ PLA +VD+ IA+ T GF+GADL + A K
Sbjct: 636 LDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQ-RACKL 694
Query: 575 AVDGGEKLTATELEFAKDRILMGTERKTMFISEESK--KLTAYH 616
A+ A E E +++ + M + E+ ++T+ H
Sbjct: 695 AIR-----QAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAH 733
Score = 39 (18.8 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 169 EKRI-EQLIAEANANPKDPAKQTALLSELNK-QSPEAVIKRFEQRDHEVD 216
E+RI QL+ + K + +++ N+ S + ++RF + D E+D
Sbjct: 318 ERRIVSQLLTLMDGMKK--SSHLIVMAATNRPNSIDPALRRFGRFDREID 365
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 437 (158.9 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 104/259 (40%), Positives = 153/259 (59%)
Query: 351 EKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK + + D+ G D QELVE VV + + +F +G K PKG+L+ G PGTGKTLLA+
Sbjct: 161 EKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLAR 220
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
A A + + AG + +MF+G GA+ VR F AK+K P IIFIDE+DA+G+ R
Sbjct: 221 ACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDS 280
Query: 470 E--G--HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
E G ++T+ +LL ++DGF + I ++AATN DILDPAL R GR DR I P P+
Sbjct: 281 EVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPN 340
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
R IL+++ + ++ DV+ +AR + FNGA L + A + A GG +L
Sbjct: 341 EEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHN 400
Query: 586 ELEFAKDRI-LMGTERKTM 603
+ F + + +M ++KT+
Sbjct: 401 D--FVEGCVEVMAKKKKTL 417
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 437 (158.9 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 102/242 (42%), Positives = 145/242 (59%)
Query: 351 EKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E+ + + D+ G D QELVE +V + + KF LG + PKG+L+ G PGTGKTLLA+
Sbjct: 167 ERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLAR 226
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR--- 466
A A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+G+ R
Sbjct: 227 ACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDS 286
Query: 467 -KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
K + ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR I P P+
Sbjct: 287 EKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPN 346
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
R I++++ + + DV+ + +AR T FNGA V + A A+ G AT
Sbjct: 347 EEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQ-CKAVCVEAGMIALRRG----AT 401
Query: 586 EL 587
EL
Sbjct: 402 EL 403
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 458 (166.3 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 97/241 (40%), Positives = 142/241 (58%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 459 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 517
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 518 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 577
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 578 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 637
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD+ +A+ T GF+GADL + A K A
Sbjct: 638 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQ-RACKLA 696
Query: 576 V 576
+
Sbjct: 697 I 697
Score = 385 (140.6 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 89/219 (40%), Positives = 124/219 (56%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G G R A D S + E ++
Sbjct: 263 GAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPSPQTHGEVE-RR 321
Query: 476 TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILEL 535
+ QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR EIL++
Sbjct: 322 IVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQI 381
Query: 536 YLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
+ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 382 HTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 420
Score = 40 (19.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 318 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 366
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 436 (158.5 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 101/229 (44%), Positives = 141/229 (61%)
Query: 353 NVKTFKDVKGCDDAKQEL-VEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
NV T+ D+ +D ++EL + ++ ++NP +F LG P G+LL G PG GKTLLAKA+
Sbjct: 301 NV-TWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV 359
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE- 470
A E+G+ F G E M+VG R VR +FQ AK APC+IF DE+DA+ R E
Sbjct: 360 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 419
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
G + + ++QLL EMDG E + + +MAATN PDI+DPA+ RPGR D+ + V P R
Sbjct: 420 GASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRL 479
Query: 531 EILELYLQD--KPLAD-DVDVKAIARGT--PGFNGADLANLVNIAAIKA 574
IL+ ++ KP D DV+++AIA + GADL+ LV A+I A
Sbjct: 480 AILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICA 528
Score = 244 (91.0 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 64/165 (38%), Positives = 85/165 (51%)
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGH 472
E +P A E G +++R LF+ A APCIIFIDEIDA+ R+ +
Sbjct: 45 ELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDM 104
Query: 473 TKKTLHQLLVEMDGFEQ---NEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
++ + QLL MD ++++ ATN PD LDPAL R GRFDR I + PD R
Sbjct: 105 ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASR 164
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
+ IL+ + L D +A TPGF GADL L AA+ A
Sbjct: 165 ERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCA 209
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 458 (166.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 97/241 (40%), Positives = 142/241 (58%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ V T++D+ G +D K+EL E+V+Y +++P KF + G KG+L G
Sbjct: 465 PSALRETVVEVPQV-TWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 523
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 524 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDEL 583
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 584 DSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRL 643
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD + R IL+ L+ P+A DVD+ +A+ T GF+GADL + A K A
Sbjct: 644 DQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQ-RACKLA 702
Query: 576 V 576
+
Sbjct: 703 I 703
Score = 452 (164.2 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 99/224 (44%), Positives = 138/224 (61%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 203 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 262
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST----RKQWEG 471
G FF G E G +R F+ +K AP IIFIDE+DA+ S Q G
Sbjct: 263 GAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPSPQTHG 322
Query: 472 HTKKTL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++ + QLL MDG +Q +I+MAATN P+ +DPAL R GRFDR + + PD GR
Sbjct: 323 EVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRL 382
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
EIL+++ ++ LADDVD++ +A T G GADLA L + AA++A
Sbjct: 383 EILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 426
Score = 40 (19.1 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD 216
+E+ I D KQ A +++ N+ S + ++RF + D EVD
Sbjct: 324 VERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVD 372
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 456 (165.6 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 96/234 (41%), Positives = 145/234 (61%)
Query: 344 LNKEVMPEKNVKT--FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAP 400
+N+E E N+ + D+ GC ++ E+VE L++P F +G K P+G+L+ G P
Sbjct: 199 INRED-EENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPP 257
Query: 401 GTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEID 460
GTGKTL+A+A+A E G FF G E G +R F+ A+K AP IIFIDEID
Sbjct: 258 GTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEID 317
Query: 461 AVGSTRKQWEGHT-KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHI 519
++ R + G ++ + QLL MDG + ++++AATN P+ +DPAL R GRFDR +
Sbjct: 318 SIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREV 377
Query: 520 VVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIK 573
+ PD GR E+L ++ ++ LADDVD++A+A T G+ GAD+A+L + AA++
Sbjct: 378 DIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQ 431
Score = 453 (164.5 bits), Expect = 4.5e-40, P = 4.5e-40
Identities = 102/253 (40%), Positives = 142/253 (56%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ NV T+ DV G D+ K+EL E VEY + +P ++T+ G KG+L G
Sbjct: 471 PSALRETVVESVNV-TWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGP 529
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PGTGKTLLAKA+A E F G E M+ G +R +F A+ AP ++F+DE+
Sbjct: 530 PGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDEL 589
Query: 460 DAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + + ++QLL EMDG + + ++ ATN PD +DPA+ RPGR
Sbjct: 590 DSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRL 649
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I VP PD R IL L+ PL +++ AIA+ T GF+GADL +V AA A
Sbjct: 650 DQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAI 709
Query: 576 VDGGEKLTATELE 588
D E E E
Sbjct: 710 KDSIEAHRQHEAE 722
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 435 (158.2 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 104/257 (40%), Positives = 150/257 (58%)
Query: 341 PKELNKEV----MPEKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGIL 395
P E + V + EK + + D+ G D +EL+E VV +K KF LG K PKG L
Sbjct: 179 PSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGAL 238
Query: 396 LTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIF 455
+ G PGTGKTLLA+A A ++G F A + +MF+G GA+ VR F AK+KAP IIF
Sbjct: 239 MYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIF 298
Query: 456 IDEIDAVGSTR----KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTR 511
IDE+DA+G+ R K + ++T+ +LL ++DGF ++ + ++AATN D LDPAL R
Sbjct: 299 IDELDAIGTKRFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLR 358
Query: 512 PGRFDRHIVVPNPDVRGRQEILELYLQDKPLADD--VDVKAIARGTPGFNGADLANLVNI 569
GR DR I P P R+ +L+++ + K D+ V+ + +AR T FNGA L V +
Sbjct: 359 SGRLDRKIEFPLPSEEARESVLKIHAR-KLHCDNNSVNWRELARSTDEFNGAQL-KAVTV 416
Query: 570 AAIKAAVDGGEKLTATE 586
A A+ G+ + E
Sbjct: 417 EAGMIALRNGKSIIKHE 433
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 455 (165.2 bits), Expect = 2.2e-40, P = 2.2e-40
Identities = 96/241 (39%), Positives = 142/241 (58%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L +E + E T++D+ G + K+EL E V+Y +++P KF + G + KG+L G
Sbjct: 459 PSAL-RETVVEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGP 517
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR LF A++ APC++F DE+
Sbjct: 518 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDEL 577
Query: 460 DAVGSTRKQWEGHT----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ +R +G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 578 DSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRL 637
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD+ R IL+ L P+A DVD++ + + T GF+GADL + A K A
Sbjct: 638 DQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQ-RACKLA 696
Query: 576 V 576
+
Sbjct: 697 I 697
Score = 431 (156.8 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 95/234 (40%), Positives = 139/234 (59%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ G ++ E+VE L++P F +G K PKGILL G PG GKT++A+A+A E
Sbjct: 201 YDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANET 260
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDEID++ R++ +G ++
Sbjct: 261 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVER 320
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG + +I+M ATN P+ +DPAL R GRFDR I + PD GR EI+
Sbjct: 321 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEIMR 380
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ++ L + VD++A+A T G+ GADLA L +A++ EK+ +LE
Sbjct: 381 IHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCI---REKMDVIDLE 431
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 413 (150.4 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
Identities = 97/245 (39%), Positives = 144/245 (58%)
Query: 344 LNKEVMPEKNVKTFKDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGT 402
L+K++ + + + C A LVE +V + + KF LG + PKG+L+ G PGT
Sbjct: 192 LDKQIQEVREARHLTSLL-CLSAS--LVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGT 248
Query: 403 GKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAV 462
GKTLLA+A A + F AG + +MF+G GA+ VR F AK+KAP IIFIDE+DA+
Sbjct: 249 GKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 308
Query: 463 GSTR----KQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRH 518
G+ R K + ++T+ +LL ++DGF+ N + ++AATN DILDPAL R GR DR
Sbjct: 309 GTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRK 368
Query: 519 IVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDG 578
I P P+ R I++++ + ++ DV+ + +AR T FNGA + A + A G
Sbjct: 369 IEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRG 428
Query: 579 GEKLT 583
+LT
Sbjct: 429 ATELT 433
Score = 45 (20.9 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
Identities = 42/199 (21%), Positives = 72/199 (36%)
Query: 178 EANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYL 237
E A D A+Q + E+ K S E +I+R D E+ E LR A+ + +
Sbjct: 16 EKMATVWDEAEQDGIGEEVLKMSTEEIIQRTRLLDSEIKIMKS-EVLRVTHELQAMKDKI 74
Query: 238 PD--EQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQ 295
+ E+ TLP L+ + ++P E+ ++ + D + K +
Sbjct: 75 KENSEKIKVNKTLPYLVSNVIELLD-------VDPNDQEEDGANIDL-DSQRKGKCAVIK 126
Query: 296 ELISTILFTVAVGLVWLMGAAALQK--YIXXXXXXXXXXXXXXXXYAPKELNKEVMPEKN 353
F +GLV A L+ + Y + EV E+
Sbjct: 127 TSTRQTYFLPVIGLV---DAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEV-DERP 182
Query: 354 VKTFKDVKGCDDAKQELVE 372
+ + D+ G D QE+ E
Sbjct: 183 TEQYSDIGGLDKQIQEVRE 201
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 455 (165.2 bits), Expect = 2.4e-40, P = 2.4e-40
Identities = 104/281 (37%), Positives = 155/281 (55%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ NV +++D+ G ++ K+EL E V+Y +++P KF + G KG+L G
Sbjct: 464 PSALRETVVEVPNV-SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 522
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 523 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 582
Query: 460 DAVGSTRKQWEGHT----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ + R G + L+QLL EMDG + + ++ ATN PDI+D AL RPGR
Sbjct: 583 DSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRL 642
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
D+ I +P PD R I + L+ P+A DVDV A+A+ T GF+GAD+ + A A
Sbjct: 643 DQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAI 702
Query: 576 VDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYH 616
+ EK ++E + R + + +E ++ A H
Sbjct: 703 RENIEK----DIENERRRSQNPEAMEEDMVDDEVSEIRAAH 739
Score = 442 (160.7 bits), Expect = 7.4e-39, P = 7.4e-39
Identities = 99/234 (42%), Positives = 141/234 (60%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ DV G ++ E+VE L++P F +G K PKGILL G PG+GKTL+A+A+A E
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 265
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDEID++ R++ G ++
Sbjct: 266 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVER 325
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG + +I+M ATN P+ +DPAL R GRFDR I + PD GR E+L
Sbjct: 326 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 385
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ++ LA+DVD++ I++ T G+ GADLA L AA++ EK+ +LE
Sbjct: 386 IHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCI---REKMDVIDLE 436
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 434 (157.8 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 97/239 (40%), Positives = 139/239 (58%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T+ DV GC + ++L EVVE L +P KF LG + PKG+LL G PGTGKTL A+A+A
Sbjct: 173 TYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR 232
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----WE 470
F GSE + +VG GAR VR LF+ A+ K C+IF DEIDA+G R +
Sbjct: 233 TDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGD 292
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +L+ ++DGF+ I ++ ATN PD LDPAL RPGR DR + PD GR
Sbjct: 293 NEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRS 352
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
I +++ + + D+ +AR P GA++ ++ A + A+ K+ ATE +F
Sbjct: 353 HIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGM-FAIRARRKV-ATEKDF 409
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 434 (157.8 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 96/257 (37%), Positives = 151/257 (58%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T+ V G +E+ EV+E +K+P F LG PKG++L G PGTGKTLLA+A+A
Sbjct: 146 TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 205
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG--- 471
F +G+E + ++G G+R VR LF A++ AP IIF+DEID++GSTR + G
Sbjct: 206 TDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGD 265
Query: 472 -HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE ++ I ++ ATN DILDPAL RPGR DR I P P V R
Sbjct: 266 SEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARA 325
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
EIL ++ + L ++++ +A G +GAD+ + A + A + +T + E A
Sbjct: 326 EILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELA 385
Query: 591 KDRILMGTERKTMFISE 607
+++ + + +++
Sbjct: 386 VGKVMNKNQETAISVAK 402
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 434 (157.8 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 99/254 (38%), Positives = 148/254 (58%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T+ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ-----W 469
F +GSE + ++G G+R VR LF A++ AP IIF+DEID++GS R +
Sbjct: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
+ ++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I PNP+ R
Sbjct: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+IL+++ + L +D+K IA G +GA+L + A + A + +T + E
Sbjct: 339 FDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEM 398
Query: 590 AKDRILMGTERKTM 603
A +++ K M
Sbjct: 399 AVAKVMKKDTEKNM 412
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 434 (157.8 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 99/254 (38%), Positives = 148/254 (58%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T+ + G D +E+ EV+E +K+P F LG PKG+LL G PGTGKTLLA+A+A
Sbjct: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ-----W 469
F +GSE + ++G G+R VR LF A++ AP IIF+DEID++GS R +
Sbjct: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
+ ++T+ +LL ++DGFE + I ++ ATN DILD AL RPGR DR I PNP+ R
Sbjct: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+IL+++ + L +D+K IA G +GA+L + A + A + +T + E
Sbjct: 339 FDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEM 398
Query: 590 AKDRILMGTERKTM 603
A +++ K M
Sbjct: 399 AVAKVMKKDTEKNM 412
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 454 (164.9 bits), Expect = 3.0e-40, P = 3.0e-40
Identities = 100/234 (42%), Positives = 146/234 (62%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E+VE L++P+ F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 205 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANET 264
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDE+DA+ R++ G ++
Sbjct: 265 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 324
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG +Q +++MAATN P+ +D AL R GRFDR I + PD GR EIL+
Sbjct: 325 RIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEILQ 384
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ++ L++DVD++ I+ T G GADLA L + AA++A +K+T +LE
Sbjct: 385 IHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAI---RKKMTLIDLE 435
Score = 445 (161.7 bits), Expect = 9.1e-40, Sum P(2) = 9.1e-40
Identities = 96/245 (39%), Positives = 143/245 (58%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ +V ++D+ G D+ K+EL E+V+Y ++ P KF + G +G+L G
Sbjct: 463 PSALRETVVEVPHVN-WEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGP 521
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APCI+F DE+
Sbjct: 522 PGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDEL 581
Query: 460 DAVGSTRKQWEGHT----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 582 DSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRL 641
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIA---AI 572
D+ I +P PD+ R IL L+ P+A DVD+ +++ T GF+GADL + A AI
Sbjct: 642 DQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRACKLAI 701
Query: 573 KAAVD 577
+ A++
Sbjct: 702 REAIE 706
Score = 48 (22.0 bits), Expect = 9.1e-40, Sum P(2) = 9.1e-40
Identities = 22/84 (26%), Positives = 38/84 (45%)
Query: 172 IEQLIAEANANPKDPAKQTA---LLSELNK-QSPEAVIKRFEQRDHEVD-----SRGVVE 222
+E+ I D KQ A +++ N+ S +A ++RF + D E+D S G +E
Sbjct: 322 VERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLE 381
Query: 223 YLRALVATNAITEYLPDEQSGKPT 246
L+ ++E + EQ T
Sbjct: 382 ILQIHTKNMKLSEDVDLEQISAET 405
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 433 (157.5 bits), Expect = 3.5e-40, P = 3.5e-40
Identities = 100/231 (43%), Positives = 140/231 (60%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
++ ++ G + +EL EVVE L P F R+G K PKG+LL G PGTGKTLLA+AIA
Sbjct: 135 SYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASN 194
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT- 473
F S + ++G AR +R +F A+ PC+IF+DEIDA+G R EG +
Sbjct: 195 LEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFS-EGTSA 253
Query: 474 ----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
++TL +LL +MDGF+ + ++ ATN PD+LDPAL RPGR DR I +P P+ GR
Sbjct: 254 DREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGR 313
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIA---AIKAAVD 577
++L+++ + DVD +AIA+ GFN ADL N+ A AI+A D
Sbjct: 314 VDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERD 364
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 433 (157.5 bits), Expect = 3.5e-40, P = 3.5e-40
Identities = 97/233 (41%), Positives = 138/233 (59%)
Query: 353 NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
N + + G + +++ EVVE + NP + R+G K PKG+LL G PGTGKTLLA+A+
Sbjct: 132 NKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAM 191
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR-KQW- 469
A F S + ++G AR +R +F AK+ PCIIF+DEIDA+G R Q
Sbjct: 192 ASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGT 251
Query: 470 --EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVR 527
+ ++TL +LL +DGFE+ + ++ ATN PD+LDPAL RPGR DR I +P P+
Sbjct: 252 SADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNET 311
Query: 528 GRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIA---AIKAAVD 577
R EIL+++ D+D +++ R GFNGADL N+ A AI+A D
Sbjct: 312 ARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRD 364
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 433 (157.5 bits), Expect = 3.5e-40, P = 3.5e-40
Identities = 97/233 (41%), Positives = 138/233 (59%)
Query: 353 NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
N + + G + +++ EVVE + NP + R+G K PKG+LL G PGTGKTLLA+A+
Sbjct: 132 NKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAM 191
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR-KQW- 469
A F S + ++G AR +R +F AK+ PCIIF+DEIDA+G R Q
Sbjct: 192 ASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGT 251
Query: 470 --EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVR 527
+ ++TL +LL +DGFE+ + ++ ATN PD+LDPAL RPGR DR I +P P+
Sbjct: 252 SADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNET 311
Query: 528 GRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIA---AIKAAVD 577
R EIL+++ D+D +++ R GFNGADL N+ A AI+A D
Sbjct: 312 ARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRD 364
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 433 (157.5 bits), Expect = 3.5e-40, P = 3.5e-40
Identities = 92/252 (36%), Positives = 151/252 (59%)
Query: 349 MPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLL 407
M + +++ D+ G + QE+ E VE L +P + +G K PKG++L GAPGTGKTLL
Sbjct: 173 MDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 232
Query: 408 AKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK 467
AKA+A + F GSE + ++G G R R +F+ A + AP I+FIDEIDA+G+ R
Sbjct: 233 AKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRY 292
Query: 468 Q----WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPN 523
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I+ N
Sbjct: 293 DSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFEN 352
Query: 524 PDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 583
PD+ +++IL ++ L++DV+++ + +GAD+ + A + A + ++T
Sbjct: 353 PDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVT 412
Query: 584 ATELEFAKDRIL 595
A + + AK+R++
Sbjct: 413 AEDFKQAKERVM 424
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 433 (157.5 bits), Expect = 3.5e-40, P = 3.5e-40
Identities = 99/231 (42%), Positives = 139/231 (60%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
++ V G D +EL E +E L NP F R+G K PKG+LL G PGTGKTLLA+AIA
Sbjct: 137 SYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASN 196
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT- 473
F S + ++G AR +R +F A++ PCIIF+DEIDA+G R EG +
Sbjct: 197 IDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS-EGTSA 255
Query: 474 ----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
++TL +LL ++DGF+ + ++ ATN PD+LDPAL RPGR DR I +P P+ + R
Sbjct: 256 DREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIA---AIKAAVD 577
+IL+++ ++D +AI + GFNGADL N+ A AI+A D
Sbjct: 316 MDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERD 366
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 432 (157.1 bits), Expect = 4.5e-40, P = 4.5e-40
Identities = 96/245 (39%), Positives = 148/245 (60%)
Query: 356 TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 414
T+ V G D +E+ EV+E +K+P F LG PKG++L G PGTGKTLLA+A+A
Sbjct: 142 TYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 201
Query: 415 AGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW----E 470
F +GSE + ++G G+R VR LF A++ AP IIF+DEID++GS+R + +
Sbjct: 202 TECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGD 261
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
++T+ +LL ++DGFE ++ I ++ ATN DILDPAL RPGR DR I P P V R
Sbjct: 262 SEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAART 321
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
+IL+++ + L ++++ IA G +GAD+ + A + A + +T + E A
Sbjct: 322 DILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELA 381
Query: 591 KDRIL 595
+++
Sbjct: 382 VAKVM 386
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 431 (156.8 bits), Expect = 5.8e-40, P = 5.8e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 181 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 300
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 301 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 360
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 361 KRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 421 SKENVLYKKQEGT 433
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 431 (156.8 bits), Expect = 5.8e-40, P = 5.8e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 180 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 239
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 240 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 299
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 300 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 359
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 360 KRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 419
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 420 SKENVLYKKQEGT 432
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 430 (156.4 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 422 SKENVLYKKQEGT 434
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 430 (156.4 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 422 SKENVLYKKQEGT 434
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 430 (156.4 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 109 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 168
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 169 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 228
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 229 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 288
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 289 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 348
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 349 SKENVLYKKQEGT 361
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 430 (156.4 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 422 SKENVLYKKQEGT 434
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 430 (156.4 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 422 SKENVLYKKQEGT 434
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 430 (156.4 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 422 SKENVLYKKQEGT 434
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 430 (156.4 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 422 SKENVLYKKQEGT 434
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 430 (156.4 bits), Expect = 7.6e-40, P = 7.6e-40
Identities = 94/253 (37%), Positives = 147/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D QE+ E VE L +P + +G K PKG++L GAPGTGKTLLAKA+A
Sbjct: 182 ETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ +ADDV + + +GAD+ + A + A + K+T + +
Sbjct: 362 RRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 422 SKENVLYKKQEGT 434
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 454 (164.9 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 100/266 (37%), Positives = 150/266 (56%)
Query: 340 APKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTG 398
+P L + V+ N T+ D+ G + K+EL E+V+Y +++P K+ + G + +G+L G
Sbjct: 466 SPSALREAVVETPNT-TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYG 524
Query: 399 APGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDE 458
PG GKTLLAKAIA E F G E M+ G VR +F A+ APC++F DE
Sbjct: 525 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDE 584
Query: 459 IDAVGSTRK-----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPG 513
+D++ R G + + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPG
Sbjct: 585 LDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPG 644
Query: 514 RFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIK 573
R D+ I +P PD R +IL+ L+ PL+ D+D+ +A+ T GF+GADL + A
Sbjct: 645 RLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKL 704
Query: 574 AAVDGGEKLTATELEFAKDRILMGTE 599
A + EK E E +DR G E
Sbjct: 705 AIRESIEKEIRIEKE-RQDRQARGEE 729
Score = 423 (154.0 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 97/234 (41%), Positives = 139/234 (59%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ G ++ E+VE L++P F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 209 YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANET 268
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ +K P I+FIDEIDA+ R++ G ++
Sbjct: 269 GSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVER 328
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG + ++++AATN P+ +D AL R GRFDR I + PD GR EIL
Sbjct: 329 RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR 388
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ++ LADDVD++ IA GF GADLA+L + AA++ EK+ +LE
Sbjct: 389 IHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQI---REKMELIDLE 439
Score = 37 (18.1 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 10/48 (20%), Positives = 20/48 (41%)
Query: 169 EKRIEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVD 216
E+RI + K + + + S + ++RF + D E+D
Sbjct: 327 ERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREID 374
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 454 (164.9 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 100/266 (37%), Positives = 150/266 (56%)
Query: 340 APKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTG 398
+P L + V+ N T+ D+ G + K+EL E+V+Y +++P K+ + G + +G+L G
Sbjct: 466 SPSALREAVVETPNT-TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYG 524
Query: 399 APGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDE 458
PG GKTLLAKAIA E F G E M+ G VR +F A+ APC++F DE
Sbjct: 525 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDE 584
Query: 459 IDAVGSTRK-----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPG 513
+D++ R G + + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPG
Sbjct: 585 LDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPG 644
Query: 514 RFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIK 573
R D+ I +P PD R +IL+ L+ PL+ D+D+ +A+ T GF+GADL + A
Sbjct: 645 RLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKL 704
Query: 574 AAVDGGEKLTATELEFAKDRILMGTE 599
A + EK E E +DR G E
Sbjct: 705 AIRESIEKEIRIEKE-RQDRQARGEE 729
Score = 423 (154.0 bits), Expect = 1.1e-36, P = 1.1e-36
Identities = 97/234 (41%), Positives = 139/234 (59%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ G ++ E+VE L++P F +G K P+GILL G PGTGKTL+A+A+A E
Sbjct: 209 YDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANET 268
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ +K P I+FIDEIDA+ R++ G ++
Sbjct: 269 GSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVER 328
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG + ++++AATN P+ +D AL R GRFDR I + PD GR EIL
Sbjct: 329 RIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR 388
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ++ LADDVD++ IA GF GADLA+L + AA++ EK+ +LE
Sbjct: 389 IHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQI---REKMELIDLE 439
Score = 37 (18.1 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 10/48 (20%), Positives = 20/48 (41%)
Query: 169 EKRIEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVD 216
E+RI + K + + + S + ++RF + D E+D
Sbjct: 327 ERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREID 374
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 449 (163.1 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 98/247 (39%), Positives = 141/247 (57%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ NV ++ D+ G ++ K+EL E V+Y +++P KF + G KG+L G
Sbjct: 464 PSALRETVVEVPNV-SWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 522
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKAIA E F G E M+ G VR +F A++ APC++F DE+
Sbjct: 523 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 582
Query: 460 DAVGSTRKQWEGH-----TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGR 514
D++ + R G + L+QLL EMDG + + ++ ATN PDI+D AL RPGR
Sbjct: 583 DSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGR 642
Query: 515 FDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
D+ I +P PD R I + L+ P+A DVD+ A+A+ T GF+GAD+ + A A
Sbjct: 643 LDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYA 702
Query: 575 AVDGGEK 581
+ EK
Sbjct: 703 IRENIEK 709
Score = 442 (160.7 bits), Expect = 7.3e-39, P = 7.3e-39
Identities = 99/234 (42%), Positives = 141/234 (60%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ DV G ++ E+VE L++P F +G K PKGILL G PG+GKTL+A+A+A E
Sbjct: 206 YDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANET 265
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKK 475
G FF G E G +R F+ A+K AP IIFIDEID++ R++ G ++
Sbjct: 266 GAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVER 325
Query: 476 TL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ QLL MDG + +I+M ATN P+ +DPAL R GRFDR I + PD GR E+L
Sbjct: 326 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR 385
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
++ ++ LA+DVD++ I++ T G+ GADLA L AA++ EK+ +LE
Sbjct: 386 IHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCI---REKMDVIDLE 436
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 428 (155.7 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 93/253 (36%), Positives = 151/253 (59%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+++ D+ G + QE+ E +E L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 181 ESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVAN 240
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A + AP I+FIDEIDAVG+ R
Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGG 300
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD++ +
Sbjct: 301 EREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTK 360
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
++I E++ L++DV+++ +GAD+ + + + A + ++T T+ +
Sbjct: 361 RKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKK 420
Query: 590 AKDRILMGTERKT 602
AK+++L RKT
Sbjct: 421 AKEKVLY---RKT 430
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 428 (155.7 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 93/253 (36%), Positives = 148/253 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L GAPGTGKTLLAKA+A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 241
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDA+G+ R
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ +A+DV + + +GAD+ + A + A + K+T + +
Sbjct: 362 RRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 590 AKDRILMGTERKT 602
+K+ +L + T
Sbjct: 422 SKENVLYKKQEGT 434
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 450 (163.5 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 100/282 (35%), Positives = 155/282 (54%)
Query: 340 APKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTG 398
+P L + V+ N T+ D+ G + K+EL E+V+Y +++P K+ + G + +G+L G
Sbjct: 465 SPSALREAVVETPNT-TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYG 523
Query: 399 APGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDE 458
PG GKTLLAKAIA E F G E M+ G VR +F A+ APC++F DE
Sbjct: 524 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDE 583
Query: 459 IDAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGR 514
+D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 584 LDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGR 643
Query: 515 FDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
D+ I +P PD R +I + L+ PL+ D+D+ +A+ T GF+GADL + A A
Sbjct: 644 LDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLA 703
Query: 575 AVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYH 616
+ E+ E E +DR G E +++ ++T H
Sbjct: 704 IRESIEREIRQEKE-RQDRSARGEELMEDELADPVPEITRAH 744
Score = 422 (153.6 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 100/253 (39%), Positives = 144/253 (56%)
Query: 339 YAPKELNKEVMPEK-NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILL 396
Y + +E E N + D+ G ++ E+VE L++P F +G K P+GILL
Sbjct: 189 YEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL 248
Query: 397 TGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFI 456
G PGTGKTL+A+A+A E G FF G E G +R F +K +P I+FI
Sbjct: 249 FGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFI 308
Query: 457 DEIDAVGSTRKQWEGHTKKTL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
DEIDA+ R++ G +K + QLL MDG + ++++AATN P+ +D AL R GRF
Sbjct: 309 DEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRF 368
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
DR I + PD GR EIL ++ ++ L +DVD++ +A GF GADLA+L + AAI+
Sbjct: 369 DREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQI 428
Query: 576 VDGGEKLTATELE 588
EK+ +LE
Sbjct: 429 ---REKMELIDLE 438
Score = 41 (19.5 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 169 EKRIEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVD 216
EKRI + K A + + S + ++RF + D E+D
Sbjct: 326 EKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREID 373
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 450 (163.5 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 100/282 (35%), Positives = 155/282 (54%)
Query: 340 APKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTG 398
+P L + V+ N T+ D+ G + K+EL E+V+Y +++P K+ + G + +G+L G
Sbjct: 465 SPSALREAVVETPNT-TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYG 523
Query: 399 APGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDE 458
PG GKTLLAKAIA E F G E M+ G VR +F A+ APC++F DE
Sbjct: 524 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDE 583
Query: 459 IDAVGSTRK----QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGR 514
+D++ R G + ++Q+L EMDG + + ++ ATN PDI+DPA+ RPGR
Sbjct: 584 LDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGR 643
Query: 515 FDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
D+ I +P PD R +I + L+ PL+ D+D+ +A+ T GF+GADL + A A
Sbjct: 644 LDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLA 703
Query: 575 AVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYH 616
+ E+ E E +DR G E +++ ++T H
Sbjct: 704 IRESIEREIRQEKE-RQDRSARGEELMEDELADPVPEITRAH 744
Score = 422 (153.6 bits), Expect = 1.4e-36, P = 1.4e-36
Identities = 100/253 (39%), Positives = 144/253 (56%)
Query: 339 YAPKELNKEVMPEK-NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILL 396
Y + +E E N + D+ G ++ E+VE L++P F +G K P+GILL
Sbjct: 189 YEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL 248
Query: 397 TGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFI 456
G PGTGKTL+A+A+A E G FF G E G +R F +K +P I+FI
Sbjct: 249 FGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFI 308
Query: 457 DEIDAVGSTRKQWEGHTKKTL-HQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
DEIDA+ R++ G +K + QLL MDG + ++++AATN P+ +D AL R GRF
Sbjct: 309 DEIDAIAPKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRF 368
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
DR I + PD GR EIL ++ ++ L +DVD++ +A GF GADLA+L + AAI+
Sbjct: 369 DREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQI 428
Query: 576 VDGGEKLTATELE 588
EK+ +LE
Sbjct: 429 ---REKMELIDLE 438
Score = 41 (19.5 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 169 EKRIEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVD 216
EKRI + K A + + S + ++RF + D E+D
Sbjct: 326 EKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREID 373
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 425 (154.7 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 93/246 (37%), Positives = 142/246 (57%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+++ D+ G + QE+ E VE L +P + +G K PKG++L GAPGTGKTLLAKA+A
Sbjct: 201 ESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 260
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G R VR +FQ A + AP I+FIDEIDA+G+ R
Sbjct: 261 QTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDSTSGG 320
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I+ NPD +
Sbjct: 321 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNTK 380
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
++I L+ L DDVD+ +GAD+ + A + A + ++ +
Sbjct: 381 KKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERRMRVQMDDFRA 440
Query: 590 AKDRIL 595
A++RI+
Sbjct: 441 ARERIM 446
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 425 (154.7 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 101/246 (41%), Positives = 144/246 (58%)
Query: 339 YAPKELNKEV--MPEKNVK--TFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKG 393
Y P+E++ V M ++ T+ + G D +EL EV+E L NP F R+G PKG
Sbjct: 118 YLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKG 177
Query: 394 ILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCI 453
LL G PGTGKTLLA+A+A + F S + ++G AR +R +F A+ PCI
Sbjct: 178 CLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCI 237
Query: 454 IFIDEIDAVGSTRKQWEGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPA 508
IF+DEIDA+G R EG + ++TL +LL +MDGF+ + ++ ATN PD LDPA
Sbjct: 238 IFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPA 296
Query: 509 LTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVN 568
L RPGR DR I +P P+ + R EIL+++ ++D +AI + + FNGADL N+
Sbjct: 297 LLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCT 356
Query: 569 IAAIKA 574
A + A
Sbjct: 357 EAGLFA 362
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 425 (154.7 bits), Expect = 2.7e-39, P = 2.7e-39
Identities = 120/370 (32%), Positives = 189/370 (51%)
Query: 246 TTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVS-NKSRFAQEL-ISTILF 303
+T+ ++E Q + S N P+L V E + VD + S N++ A + S ++
Sbjct: 65 STMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGKSAVIK 124
Query: 304 TVAVGLVWL--MGAAALQKYIXXXXXXXXXXXXXXXXYAPKELNKEV----MPEKNVKTF 357
T ++L +G ++ P E + V + EK + +
Sbjct: 125 TSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEKPTERY 184
Query: 358 KDVKGCDDAKQELVE-VVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
D+ G +EL E +V ++ KF +LG K PKG L+ G PGTGKTLLA+A A ++
Sbjct: 185 SDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSN 244
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR----KQWEGH 472
F A + +MF+G GA+ VR F AK+K+P IIFIDE+DA+G+ R K +
Sbjct: 245 ATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDRE 304
Query: 473 TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 532
++T+ +LL ++DGF ++ + ++AATN D LDPAL R GR DR + P P+ R I
Sbjct: 305 VQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGI 364
Query: 533 LELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 592
L ++ + + DD++ + +AR T +NGA L ++ A + A G K+ E D
Sbjct: 365 LRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDTKINH---EHFMD 421
Query: 593 RILMGTERKT 602
IL RK+
Sbjct: 422 GILEVQMRKS 431
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 424 (154.3 bits), Expect = 3.5e-39, P = 3.5e-39
Identities = 93/246 (37%), Positives = 144/246 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 181 ETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 240
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ AP I+FIDEIDAVG+ R
Sbjct: 241 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGG 300
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 301 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 360
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I ++ LA+DV++ + +GAD+ + A + A + K+T + +
Sbjct: 361 RRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420
Query: 590 AKDRIL 595
+K+ +L
Sbjct: 421 SKESVL 426
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 424 (154.3 bits), Expect = 3.5e-39, P = 3.5e-39
Identities = 92/247 (37%), Positives = 146/247 (59%)
Query: 354 VKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
++++ D+ G + QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 184 LESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVA 243
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ---- 468
F GSE + ++G G + VR LF+ A +P I+FIDEIDAVG+ R
Sbjct: 244 NSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSG 303
Query: 469 WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD++
Sbjct: 304 GEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 363
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
R+ I +++ LA+DV+++ F+GAD+ + A + A + K+T + +
Sbjct: 364 RRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFK 423
Query: 589 FAKDRIL 595
AK++++
Sbjct: 424 KAKEKVM 430
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 423 (154.0 bits), Expect = 4.5e-39, P = 4.5e-39
Identities = 92/246 (37%), Positives = 143/246 (58%)
Query: 355 KTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG 413
+T+ D+ G D+ QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 182 ETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVAN 241
Query: 414 EAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ----W 469
+ F GSE + ++G G + VR LF+ A++ P I+FIDEIDA+G+ R
Sbjct: 242 QTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGG 301
Query: 470 EGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
E ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD + +
Sbjct: 302 EREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTK 361
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
+ I +++ LADDV + + +GAD+ + A + A + K+T + +
Sbjct: 362 KRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
Query: 590 AKDRIL 595
+K+ L
Sbjct: 422 SKENFL 427
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 409 (149.0 bits), Expect = 4.6e-39, Sum P(2) = 4.6e-39
Identities = 91/229 (39%), Positives = 135/229 (58%)
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
EK ++ D+ GCD KQE+ E VE L + + ++G P+G+LL G PGTGKT+LAK
Sbjct: 148 EKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAK 207
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
A+A F GSEF + ++G G R VR +F+ AK+ AP IIFIDE+DA+ + R
Sbjct: 208 AVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDA 267
Query: 470 E-G---HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ G ++ L +LL +MDGF+Q + ++ ATN D LDPAL RPGR DR I P PD
Sbjct: 268 QTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 327
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
R ++ + ++ L+D+VD++ + A++A + A + A
Sbjct: 328 RRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHA 376
Score = 37 (18.1 bits), Expect = 4.6e-39, Sum P(2) = 4.6e-39
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 214 EVDSRGVVEYL-RALVATNAITEYLPDEQSGKPTTLPALLQELQ 256
E D G ++ L R L T+ EY+ DEQ L +E++
Sbjct: 27 EEDLYGRLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVK 70
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 422 (153.6 bits), Expect = 5.8e-39, P = 5.8e-39
Identities = 91/249 (36%), Positives = 150/249 (60%)
Query: 354 VKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
++++ D+ G + QE+ E VE L +P + +G K PKG++L G PGTGKTLLAKA+A
Sbjct: 184 LESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVA 243
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGH 472
F GSE + ++G G + VR LF+ A +P I+FIDEIDAVG+ K+++ H
Sbjct: 244 NSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGT--KRYDAH 301
Query: 473 T------KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
+ ++T+ +LL ++DGF+ + ++ ATN + LDPAL RPGR DR I P PD+
Sbjct: 302 SGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDI 361
Query: 527 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
+ R+ I +++ L++DV+++ F+GAD+ + A + A + K+T +
Sbjct: 362 KTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPD 421
Query: 587 LEFAKDRIL 595
+ AK++++
Sbjct: 422 FKKAKEKVM 430
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 442 (160.7 bits), Expect = 8.9e-39, P = 8.9e-39
Identities = 100/229 (43%), Positives = 141/229 (61%)
Query: 353 NVKTFKDVKGCDDAKQEL-VEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
NV T+ DV +D ++EL + ++ ++NP +F LG P G+LL G PG GKTLLAKA+
Sbjct: 576 NV-TWADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAV 634
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE- 470
A E+G+ F G E M+VG R VR +FQ AK APC+IF DE+DA+ R E
Sbjct: 635 ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET 694
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
G + + ++QLL EMDG E + + ++AATN PDI+DPA+ RPGR D+ + V P R
Sbjct: 695 GASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRV 754
Query: 531 EILELYLQD---KPLADDVDVKAIARG--TPGFNGADLANLVNIAAIKA 574
IL+ ++ PL +DVD++AIA + GADL+ LV A++ A
Sbjct: 755 AILKTITKNGTKPPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCA 803
Score = 372 (136.0 bits), Expect = 6.0e-31, P = 6.0e-31
Identities = 89/226 (39%), Positives = 127/226 (56%)
Query: 353 NVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
+VK F+DV G D +E+ +++ ++++P + LG P+G+LL G PG GKTLLA AIA
Sbjct: 260 SVK-FEDVGGNDATLKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIA 318
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEG 471
GE +P A E G +++R LF A APCI+FIDEIDA+ R+ +
Sbjct: 319 GELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVASKD 378
Query: 472 HTKKTLHQLLVEMDGFEQ---NEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
++ + QLL MD ++++ ATN PD LDPAL R GRFDR + + PD
Sbjct: 379 MERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIPDEAS 438
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKA 574
R+ IL+ + L + + +A TPGF GADL L AA+ A
Sbjct: 439 RERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCA 484
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 441 (160.3 bits), Expect = 9.2e-39, Sum P(2) = 9.2e-39
Identities = 99/261 (37%), Positives = 147/261 (56%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ NVK + D+ G D+ K L E++ Y + +P KF + G +G+L G
Sbjct: 464 PSSLRETVVEVPNVK-WDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGP 522
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKA+A E F G E M+ G VR +F A+ APC++F DE+
Sbjct: 523 PGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDEL 582
Query: 460 DAVGSTRKQ----WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++G+ R G + ++QLL E+DG + + + ATN P++LD AL RPGR
Sbjct: 583 DSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRL 642
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAA---I 572
D+ I +P PD+ R IL L+ P+A++V + +A+ T GF+GADLA L AA I
Sbjct: 643 DQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAI 702
Query: 573 KAAVDGGEKLTATELEFAKDR 593
+ A+D E ++LE + +
Sbjct: 703 RDAIDAEEMNKKSKLELSNKK 723
Score = 424 (154.3 bits), Expect = 8.8e-37, P = 8.8e-37
Identities = 96/254 (37%), Positives = 147/254 (57%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E++E L++P F LG K P+G+LL G PG+GKT +A+A+A E
Sbjct: 206 YDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANET 265
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-K 474
G FF G E G +R F+ A+K +P IIFIDEID++ R++ G +
Sbjct: 266 GAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 325
Query: 475 KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ + QLL MDG + ++++AATN + +DPAL R GRFDR I + PD GR EIL
Sbjct: 326 RVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILR 385
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRI 594
++ ++ L+ DV ++ +A T GF GADLA L AA+ EK+ +LE D I
Sbjct: 386 IHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCI---REKMDVIDLE---DEI 439
Query: 595 LMGTERKTMFISEE 608
+ ++M ++++
Sbjct: 440 IDKEVLESMCVTQD 453
Score = 44 (20.5 bits), Expect = 9.2e-39, Sum P(2) = 9.2e-39
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 189 QTALLSELNKQ-SPEAVIKRFEQRDHEVD 216
Q +++ N+Q S + ++RF + D E+D
Sbjct: 343 QVVVIAATNRQNSIDPALRRFGRFDREID 371
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 441 (160.3 bits), Expect = 9.2e-39, Sum P(2) = 9.2e-39
Identities = 99/261 (37%), Positives = 147/261 (56%)
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGA 399
P L + V+ NVK + D+ G D+ K L E++ Y + +P KF + G +G+L G
Sbjct: 464 PSSLRETVVEVPNVK-WDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGP 522
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PG GKTLLAKA+A E F G E M+ G VR +F A+ APC++F DE+
Sbjct: 523 PGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDEL 582
Query: 460 DAVGSTRKQ----WEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
D++G+ R G + ++QLL E+DG + + + ATN P++LD AL RPGR
Sbjct: 583 DSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRL 642
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAA---I 572
D+ I +P PD+ R IL L+ P+A++V + +A+ T GF+GADLA L AA I
Sbjct: 643 DQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAI 702
Query: 573 KAAVDGGEKLTATELEFAKDR 593
+ A+D E ++LE + +
Sbjct: 703 RDAIDAEEMNKKSKLELSNKK 723
Score = 424 (154.3 bits), Expect = 8.8e-37, P = 8.8e-37
Identities = 96/254 (37%), Positives = 147/254 (57%)
Query: 357 FKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
+ D+ GC ++ E++E L++P F LG K P+G+LL G PG+GKT +A+A+A E
Sbjct: 206 YDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANET 265
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-K 474
G FF G E G +R F+ A+K +P IIFIDEID++ R++ G +
Sbjct: 266 GAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVER 325
Query: 475 KTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILE 534
+ + QLL MDG + ++++AATN + +DPAL R GRFDR I + PD GR EIL
Sbjct: 326 RVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILR 385
Query: 535 LYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRI 594
++ ++ L+ DV ++ +A T GF GADLA L AA+ EK+ +LE D I
Sbjct: 386 IHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCI---REKMDVIDLE---DEI 439
Query: 595 LMGTERKTMFISEE 608
+ ++M ++++
Sbjct: 440 IDKEVLESMCVTQD 453
Score = 44 (20.5 bits), Expect = 9.2e-39, Sum P(2) = 9.2e-39
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 189 QTALLSELNKQ-SPEAVIKRFEQRDHEVD 216
Q +++ N+Q S + ++RF + D E+D
Sbjct: 343 QVVVIAATNRQNSIDPALRRFGRFDREID 371
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 419 (152.6 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 100/247 (40%), Positives = 146/247 (59%)
Query: 339 YAPKELNKEV--MPEK---NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPK 392
Y P+E++ V M + NV ++ ++ G + +EL EV+E L NP F R+G PK
Sbjct: 110 YLPREVDPLVYNMSHEDPGNV-SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 168
Query: 393 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 452
G LL G PGTGKTLLA+A+A + F S + ++G AR +R +F A+ PC
Sbjct: 169 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 228
Query: 453 IIFIDEIDAVGSTRKQWEGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDP 507
IIF+DEIDA+G R EG + ++TL +LL +MDGF+ + ++ ATN PD LDP
Sbjct: 229 IIFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 508 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 567
AL RPGR DR I + P+ + R +IL+++ ++D +AI + + GFNGADL N+
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVC 347
Query: 568 NIAAIKA 574
A + A
Sbjct: 348 TEAGMFA 354
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 419 (152.6 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 98/246 (39%), Positives = 143/246 (58%)
Query: 339 YAPKELNKEVM----PEKNVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPKG 393
Y P+E++ V + ++ ++ G + +EL EV+E L NP F R+G PKG
Sbjct: 110 YLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKG 169
Query: 394 ILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCI 453
LL G PGTGKTLLA+A+A + F S + ++G AR +R +F A+ PCI
Sbjct: 170 CLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCI 229
Query: 454 IFIDEIDAVGSTRKQWEGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPA 508
IF+DEIDA+G R EG + ++TL +LL +MDGF+ + ++ ATN PD LDPA
Sbjct: 230 IFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPA 288
Query: 509 LTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVN 568
L RPGR DR I + P+ + R +IL+++ D+D +AI + + GFNGADL N+
Sbjct: 289 LLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCT 348
Query: 569 IAAIKA 574
A + A
Sbjct: 349 EAGMFA 354
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 418 (152.2 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 100/247 (40%), Positives = 146/247 (59%)
Query: 339 YAPKELNKEV--MPEK---NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPK 392
Y P+E++ V M + NV ++ ++ G + +EL EV+E L NP F R+G PK
Sbjct: 110 YLPREVDPLVYNMSHEDPGNV-SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 168
Query: 393 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 452
G LL G PGTGKTLLA+A+A + F S + ++G AR +R +F A+ PC
Sbjct: 169 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 228
Query: 453 IIFIDEIDAVGSTRKQWEGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDP 507
IIF+DEIDA+G R EG + ++TL +LL +MDGF+ + ++ ATN PD LDP
Sbjct: 229 IIFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 508 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 567
AL RPGR DR I + P+ + R +IL+++ ++D +AI + + GFNGADL N+
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVC 347
Query: 568 NIAAIKA 574
A + A
Sbjct: 348 TEAGMFA 354
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 418 (152.2 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 100/247 (40%), Positives = 146/247 (59%)
Query: 339 YAPKELNKEV--MPEK---NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPK 392
Y P+E++ V M + NV ++ ++ G + +EL EV+E L NP F R+G PK
Sbjct: 116 YLPREVDPLVYNMSHEDPGNV-SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 174
Query: 393 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 452
G LL G PGTGKTLLA+A+A + F S + ++G AR +R +F A+ PC
Sbjct: 175 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 234
Query: 453 IIFIDEIDAVGSTRKQWEGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDP 507
IIF+DEIDA+G R EG + ++TL +LL +MDGF+ + ++ ATN PD LDP
Sbjct: 235 IIFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 293
Query: 508 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 567
AL RPGR DR I + P+ + R +IL+++ ++D +AI + + GFNGADL N+
Sbjct: 294 ALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVC 353
Query: 568 NIAAIKA 574
A + A
Sbjct: 354 TEAGMFA 360
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 418 (152.2 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 100/247 (40%), Positives = 146/247 (59%)
Query: 339 YAPKELNKEV--MPEK---NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPK 392
Y P+E++ V M + NV ++ ++ G + +EL EV+E L NP F R+G PK
Sbjct: 110 YLPREVDPLVYNMSHEDPGNV-SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 168
Query: 393 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 452
G LL G PGTGKTLLA+A+A + F S + ++G AR +R +F A+ PC
Sbjct: 169 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 228
Query: 453 IIFIDEIDAVGSTRKQWEGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDP 507
IIF+DEIDA+G R EG + ++TL +LL +MDGF+ + ++ ATN PD LDP
Sbjct: 229 IIFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 508 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 567
AL RPGR DR I + P+ + R +IL+++ ++D +AI + + GFNGADL N+
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVC 347
Query: 568 NIAAIKA 574
A + A
Sbjct: 348 TEAGMFA 354
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 418 (152.2 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 100/247 (40%), Positives = 146/247 (59%)
Query: 339 YAPKELNKEV--MPEK---NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPK 392
Y P+E++ V M + NV ++ ++ G + +EL EV+E L NP F R+G PK
Sbjct: 124 YLPREVDPLVYNMSHEDPGNV-SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 182
Query: 393 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 452
G LL G PGTGKTLLA+A+A + F S + ++G AR +R +F A+ PC
Sbjct: 183 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 242
Query: 453 IIFIDEIDAVGSTRKQWEGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDP 507
IIF+DEIDA+G R EG + ++TL +LL +MDGF+ + ++ ATN PD LDP
Sbjct: 243 IIFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 301
Query: 508 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 567
AL RPGR DR I + P+ + R +IL+++ ++D +AI + + GFNGADL N+
Sbjct: 302 ALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVC 361
Query: 568 NIAAIKA 574
A + A
Sbjct: 362 TEAGMFA 368
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 418 (152.2 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 100/247 (40%), Positives = 146/247 (59%)
Query: 339 YAPKELNKEV--MPEK---NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPK 392
Y P+E++ V M + NV ++ ++ G + +EL EV+E L NP F R+G PK
Sbjct: 110 YLPREVDPLVYNMSHEDPGNV-SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 168
Query: 393 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 452
G LL G PGTGKTLLA+A+A + F S + ++G AR +R +F A+ PC
Sbjct: 169 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 228
Query: 453 IIFIDEIDAVGSTRKQWEGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDP 507
IIF+DEIDA+G R EG + ++TL +LL +MDGF+ + ++ ATN PD LDP
Sbjct: 229 IIFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 508 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 567
AL RPGR DR I + P+ + R +IL+++ ++D +AI + + GFNGADL N+
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVC 347
Query: 568 NIAAIKA 574
A + A
Sbjct: 348 TEAGMFA 354
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 418 (152.2 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 100/247 (40%), Positives = 146/247 (59%)
Query: 339 YAPKELNKEV--MPEK---NVKTFKDVKGCDDAKQELVEVVEY-LKNPSKFTRLGGKLPK 392
Y P+E++ V M + NV ++ ++ G + +EL EV+E L NP F R+G PK
Sbjct: 110 YLPREVDPLVYNMSHEDPGNV-SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPK 168
Query: 393 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 452
G LL G PGTGKTLLA+A+A + F S + ++G AR +R +F A+ PC
Sbjct: 169 GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPC 228
Query: 453 IIFIDEIDAVGSTRKQWEGHT-----KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDP 507
IIF+DEIDA+G R EG + ++TL +LL +MDGF+ + ++ ATN PD LDP
Sbjct: 229 IIFMDEIDAIGGRRFS-EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDP 287
Query: 508 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 567
AL RPGR DR I + P+ + R +IL+++ ++D +AI + + GFNGADL N+
Sbjct: 288 ALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVC 347
Query: 568 NIAAIKA 574
A + A
Sbjct: 348 TEAGMFA 354
WARNING: HSPs involving 466 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 802 709 0.00083 121 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 716
No. of states in DFA: 622 (66 KB)
Total size of DFA: 342 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.82u 0.12s 63.94t Elapsed: 00:00:03
Total cpu time: 63.89u 0.12s 64.01t Elapsed: 00:00:03
Start: Tue May 21 06:42:47 2013 End: Tue May 21 06:42:50 2013
WARNINGS ISSUED: 2