BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003696
(802 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGM0|FTSHB_ARATH ATP-dependent zinc metalloprotease FTSH 11,
chloroplastic/mitochondrial OS=Arabidopsis thaliana
GN=FTSH11 PE=1 SV=1
Length = 806
Score = 1177 bits (3044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/812 (76%), Positives = 691/812 (85%), Gaps = 25/812 (3%)
Query: 5 LQAFLFCKPSLSLTITTASSSKRYRFRHSISPPRH--HSPPPPPRSSSSFSNSRFSYDPL 62
LQA LF +P L SS K Y S S S R SS NSRF PL
Sbjct: 6 LQASLFLRPPLH-----TSSFKLYPCLFSSSSLSFCPQSLSSFYRLSSVLHNSRFR--PL 58
Query: 63 LIPCAL-QNVDSEDSKLLNNSNPDEVSESEVSKK----SEVVRIVEEVNDR-----EDNL 112
PC+L Q+ + DS + + EV++S S + +EV + E NDR E
Sbjct: 59 --PCSLRQDNVASDSDFIPKDSAFEVTDSAESNRLVSDTEVSEL--ETNDRFVGGEETKS 114
Query: 113 GNNQKLVENQEGAGAAVDSKK--IPLMVFLMGVWARLSRGIEKLMTWDWLSWWPFWRQEK 170
G + V N G D KK ++V +M +WA + R IEK+M W+WLSWWPF RQEK
Sbjct: 115 GGEEAEVSNGVTEGKEEDQKKSKFRIVVLMMALWAAIKRAIEKVMEWEWLSWWPFSRQEK 174
Query: 171 RIEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSRGVVEYLRALVAT 230
R+E+LIAEA+ANPKD A Q ALL+ELNK PEAV++RFEQR+H VDSRGV EY+RALV T
Sbjct: 175 RLEKLIAEADANPKDAALQGALLAELNKHIPEAVVQRFEQREHTVDSRGVAEYIRALVIT 234
Query: 231 NAITEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNK 290
NAI+EYLPDEQ+GKP++LPALLQEL+HRAS N +E F+NPG+SEKQPLHV MV+PKVSNK
Sbjct: 235 NAISEYLPDEQTGKPSSLPALLQELKHRASGNMDESFVNPGISEKQPLHVTMVNPKVSNK 294
Query: 291 SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMP 350
SRFAQEL+STILFTVAVGLVW+MGAAALQKYIGSLGGIGTSGVGSSSSY+PKELNKE+ P
Sbjct: 295 SRFAQELVSTILFTVAVGLVWIMGAAALQKYIGSLGGIGTSGVGSSSSYSPKELNKEITP 354
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 410
EKNVKTFKDVKGCDDAKQEL EVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA
Sbjct: 355 EKNVKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 414
Query: 411 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE 470
IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE
Sbjct: 415 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE 474
Query: 471 GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQ 530
GHTKKTLHQLLVEMDGFEQNEGII+MAATNLPDILDPALTRPGRFDRHIVVP+PDVRGR+
Sbjct: 475 GHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGRE 534
Query: 531 EILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFA 590
EILELYLQ KP+++DVDVKAIARGTPGFNGADLANLVNIAAIKAAV+G EKL++ +LEFA
Sbjct: 535 EILELYLQGKPMSEDVDVKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLSSEQLEFA 594
Query: 591 KDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQ 650
KDRI+MGTERKTMF+SE+SKKLTAYHESGHAIVA NT+GAHPIHKATIMPRGSALGMVTQ
Sbjct: 595 KDRIVMGTERKTMFVSEDSKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQ 654
Query: 651 LPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCG 710
LPS+DETSVS++QLLARLDVCMGGRVAEELIFG DHITTGASSDL ATELA YMVS+CG
Sbjct: 655 LPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCG 714
Query: 711 MSDAIGPVHIKDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYET 770
MS+AIGPVHIK+RPSS+MQSRIDAEVVKLLREAY+RVK+LLK+HEKQLH LANALLEYET
Sbjct: 715 MSEAIGPVHIKERPSSDMQSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYET 774
Query: 771 LSAEEIKRILLPYREGQLPEQQEELEEDLVLA 802
L+AE+IKRILLP +EG+ E+Q++ E DLVLA
Sbjct: 775 LTAEDIKRILLPKQEGEKFEEQQQEEGDLVLA 806
>sp|A2ZVG7|FTSH9_ORYSJ ATP-dependent zinc metalloprotease FTSH 9,
chloroplastic/mitochondrial OS=Oryza sativa subsp.
japonica GN=FTSH9 PE=3 SV=1
Length = 784
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/659 (81%), Positives = 597/659 (90%), Gaps = 17/659 (2%)
Query: 154 LMTWDWLSWWPFWRQEKRIEQLIAEANANPKDPAKQTALLSELNKQSPEAVIKRFEQRDH 213
+++ DW+SWWPFWR ++R+++LI +A+ANP DPAKQ+ALL ELNK SPE VIKRFEQR H
Sbjct: 123 VVSGDWMSWWPFWRPDRRLQRLIDDADANPADPAKQSALLHELNKFSPEDVIKRFEQRSH 182
Query: 214 EVDSRGVVEYLRALVATNAITEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGVS 273
VDSRGV EYLRAL+ TN I +YLPDEQSG+ +LPALLQEL+ R S N ++PF+NPG+S
Sbjct: 183 AVDSRGVAEYLRALILTNGIADYLPDEQSGRSASLPALLQELKQRVSGNEDKPFMNPGIS 242
Query: 274 EKQPLHVVMVDPKVSNKS-RFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSG 332
EKQPLHVVMVDPK + +S RFAQE+ ST+LFT+AVGL+W+MGAAALQKYIGSLGGIG SG
Sbjct: 243 EKQPLHVVMVDPKATGRSTRFAQEIFSTVLFTIAVGLMWVMGAAALQKYIGSLGGIGASG 302
Query: 333 VGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPK 392
VGSSSSY+PKELNK++MPEKNVKTFKDVKGCDDAK+EL EVVEYLKNPSKFTRLGGKLPK
Sbjct: 303 VGSSSSYSPKELNKDIMPEKNVKTFKDVKGCDDAKKELEEVVEYLKNPSKFTRLGGKLPK 362
Query: 393 GILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 452
GILLTG+PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC
Sbjct: 363 GILLTGSPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPC 422
Query: 453 IIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRP 512
I+FIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGII+MAATNLPDILDPALTRP
Sbjct: 423 IVFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRP 482
Query: 513 GRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAI 572
GRFDRHIVVPNPDVRGRQEILELYLQDKP++ DVDV AIAR TPGFNGADLANLVNIAAI
Sbjct: 483 GRFDRHIVVPNPDVRGRQEILELYLQDKPVSSDVDVNAIARSTPGFNGADLANLVNIAAI 542
Query: 573 KAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKK---------------LTAYHE 617
KAAV+G +KL A +LEFAKDRI+MGTERK+MFIS+ESKK LTAYHE
Sbjct: 543 KAAVEGADKLAAAQLEFAKDRIIMGTERKSMFISDESKKACLFKLLYFILRELILTAYHE 602
Query: 618 SGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVA 677
SGHAIVA NT+GAHPIHKATI+PRGSALGMVTQLPS DETS+S+KQLLARLDVCMGGRVA
Sbjct: 603 SGHAIVALNTQGAHPIHKATILPRGSALGMVTQLPSQDETSISKKQLLARLDVCMGGRVA 662
Query: 678 EELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRPSSEMQSRIDAEVV 737
EELIFG D++TTGA +DLH+ATELA YMVSNCGMSDAIGPVH+K+RPS EMQSRIDAEVV
Sbjct: 663 EELIFGEDNVTTGARNDLHTATELAQYMVSNCGMSDAIGPVHVKERPSVEMQSRIDAEVV 722
Query: 738 KLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREG-QLPEQQEEL 795
KLLREAY RVK LLKKHEKQLHALANALLE ETL+A+EI +++ PY+E QL Q+E+
Sbjct: 723 KLLREAYGRVKRLLKKHEKQLHALANALLERETLTADEINKVVHPYQEEPQLSFQEEDF 781
>sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2
Length = 717
Score = 605 bits (1561), Expect = e-172, Method: Compositional matrix adjust.
Identities = 333/627 (53%), Positives = 440/627 (70%), Gaps = 42/627 (6%)
Query: 184 KDPAKQTALLSEL-NKQSPEAVIKRFE-QRDHEVDSRGVVEYLRALVATNAI--TEYLPD 239
++ + A L EL + PEAVI+ FE Q ++ + EY++ALV + + +E +
Sbjct: 67 REEVNEVAHLRELIRRNDPEAVIRMFESQPSLHANASALSEYIKALVKVDRLDQSELVRT 126
Query: 240 EQSGKPTTLPALLQELQH----RASRNTNEPFLNPGV--SEKQPLHVVMVDPKVSNKSRF 293
Q G + + +E + A RN +P GV + P+H + + ++ F
Sbjct: 127 LQRG----IAGVAREEETFGGLGAFRNVGKP-TKDGVLGTASAPIHTISTE-----RTHF 176
Query: 294 AQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKN 353
++L STI T+ VG + + G AL + G G+G L++EV P +
Sbjct: 177 KEQLWSTIR-TIGVGFLLISGIGALIEDRGIGKGLG--------------LHEEVQPSMD 221
Query: 354 VKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
T F DVKG D+AK EL E+V YL++P +FTRLGGKLPKG+LL G PGTGKT+LA+AIA
Sbjct: 222 SSTKFSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIA 281
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEG 471
GEAGVPFF +GSEFEEMFVGVGARRVR LF AAKK +PCIIFIDEIDA+G +R + +
Sbjct: 282 GEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQ 341
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
+ K TL+Q+LVE+DGF+QNEGII++AATN P+ LD AL RPGRFDRHIVVPNPDV GR++
Sbjct: 342 YMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQ 401
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
ILE ++ A+DVD+ IARGTPGF+GADLANLVN+AA+KAA+DG + +T ++LEFAK
Sbjct: 402 ILESHMSKVLKAEDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAK 461
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
DRI+MG+ERK+ IS+ES+KLTA+HE GHA+VA +TEGA P+HKATI+PRG ALGMV+QL
Sbjct: 462 DRIMMGSERKSAVISDESRKLTAFHEGGHALVAIHTEGALPVHKATIVPRGMALGMVSQL 521
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P DETS+S+KQ+LARLDVCMGGRVAEELIFG +T+GASSDL AT+LA MV+ GM
Sbjct: 522 PDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKFGM 581
Query: 712 SDAIGPV-HIKD----RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALL 766
S +G V H D S+E + I++EV +LL +AY+ K +L + K+LHALANALL
Sbjct: 582 SKEVGLVAHNYDDNGKSMSTETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALL 641
Query: 767 EYETLSAEEIKRILLPYREGQLPEQQE 793
++ETLS ++IK +L L ++QE
Sbjct: 642 QHETLSGKQIKELLTDLNSPLLQKRQE 668
>sp|Q8LQJ8|FTSH5_ORYSJ ATP-dependent zinc metalloprotease FTSH 5, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH5 PE=3 SV=1
Length = 715
Score = 598 bits (1542), Expect = e-170, Method: Compositional matrix adjust.
Identities = 333/632 (52%), Positives = 428/632 (67%), Gaps = 51/632 (8%)
Query: 185 DPAKQTALLSELNKQSPEAVIKRFE-QRDHEVDSRGVVEYLRALVATNAI--TEYLPDEQ 241
D + +LL E+ + PE VI+ FE Q + + EY++ALV + + + L Q
Sbjct: 65 DSPSEASLLKEIYRSDPERVIQIFESQPSLHSNPSALAEYVKALVRVDRLEDSTLLKTLQ 124
Query: 242 SGKPTTLPALLQELQHRASRNTN----EPFLNPGVSEKQ--------PLHVVMVDPKVSN 289
G + A +E ++ S + N F + G K P+H+V +
Sbjct: 125 RG----IAASAREEENLGSVSENLGSVSAFRSAGQVTKDGILGTANAPIHMVTAE----- 175
Query: 290 KSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVM 349
+F ++L T ++A+ + + G AL + G G+G LN+EV
Sbjct: 176 TGQFKEQLWRT-FRSIALTFLLISGIGALIEDRGISKGLG--------------LNEEVQ 220
Query: 350 P--EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLL 407
P E N K F DVKG D+AK EL E+V YL++P +FTRLGGKLPKG+LL G PGTGKT+L
Sbjct: 221 PSMESNTK-FSDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTML 279
Query: 408 AKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK 467
A+AIAGEAGVPFF +GSEFEEMFVGVGARRVR LF AAKK++PCIIF+DEIDA+G +R
Sbjct: 280 ARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSRN 339
Query: 468 -QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
+ + + K TL+QLLVE+DGF+QNEGII++AATN P+ LD AL RPGRFDRHIVVPNPDV
Sbjct: 340 PKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDV 399
Query: 527 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
GR++ILE ++ +DDVD+ IARGTPGF+GADLANLVN+AA+KAA+DG + +T +
Sbjct: 400 EGRRQILESHMSKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMND 459
Query: 587 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 646
LE+AKDRI+MG+ERK+ IS+ES+KLTAYHE GHA+VA +TEGAHP+HKATI+PRG ALG
Sbjct: 460 LEYAKDRIMMGSERKSAVISDESRKLTAYHEGGHALVAIHTEGAHPVHKATIVPRGMALG 519
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
MV QLP DETSVS+KQ+LARLDVCMGGRVAEELIFG +T+GASSD AT +A MV
Sbjct: 520 MVAQLPDKDETSVSRKQMLARLDVCMGGRVAEELIFGDSEVTSGASSDFQQATAVARAMV 579
Query: 707 SNCGMSDAIGPVHIK---DRPSSEMQSR--IDAEVVKLLREAYDRVKALLKKHEKQLHAL 761
+ GMS +G V D S ++R I+ EV + AY+ K +L KH K+LHAL
Sbjct: 580 TKYGMSKQLGFVSYNYEDDGKSMSTETRLLIEKEVKCFVENAYNNAKNILIKHNKELHAL 639
Query: 762 ANALLEYETLSAEEIKRILLPYREGQLPEQQE 793
ANALLE+ETL+ +IK IL Q QQE
Sbjct: 640 ANALLEHETLTGAQIKNILAQVNNKQ---QQE 668
>sp|Q8LQJ9|FTSH4_ORYSJ ATP-dependent zinc metalloprotease FTSH 4, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH4 PE=3 SV=1
Length = 709
Score = 573 bits (1476), Expect = e-162, Method: Compositional matrix adjust.
Identities = 319/635 (50%), Positives = 419/635 (65%), Gaps = 55/635 (8%)
Query: 185 DPAKQTALLSELNKQSPEAVIKRFEQRDHEVDSR-GVVEYLRALVATNAITEYL------ 237
D + +LL E+ K PE VI+ FE + +R + EY++ALV + + +
Sbjct: 65 DVPSEASLLKEIYKSDPERVIQIFESQPWLHSNRLALSEYVKALVKVDRLDDSTLLKTLR 124
Query: 238 --------PDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSN 289
E+ G + L + A + T + L + P+H+V S
Sbjct: 125 RGMAVSGGEGERVGSSSALKS--------AGQATKDGILG---TANAPIHMV-----TSE 168
Query: 290 KSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVM 349
F ++ T ++A+ + + G AL + G G+G L++EV
Sbjct: 169 TGHFKDQIWRT-FRSLALTFLVISGIGALIEDRGISKGLG--------------LSQEVQ 213
Query: 350 PEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 408
P + KT F DVKG D+AK EL E+V YL++P +FT LGGKLPKG+LL G PGTGKT+LA
Sbjct: 214 PIMDSKTKFSDVKGVDEAKAELEEIVHYLRDPKRFTHLGGKLPKGVLLVGPPGTGKTMLA 273
Query: 409 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK- 467
+A+AGEAGVPFF +GSEFEEMFVGVGARRVR LF AAKK++PCIIF+DEIDA+G +R
Sbjct: 274 RAVAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSRNP 333
Query: 468 QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVR 527
+ + + + TL+QLLVE+DGF+QNEGII++AATN P LD AL RPGRFDRHIVVPNPDV
Sbjct: 334 KDQQYMRMTLNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVE 393
Query: 528 GRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATEL 587
GR++ILE ++ +DDVD+ IARGTPGF+GADLANLVN+AA+KAA+DG + +T +L
Sbjct: 394 GRRQILESHMLKVLKSDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDL 453
Query: 588 EFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGM 647
E+AKDRI+MG+ERK+ IS+ES+KLTAYHE GHA+VA +TEGA P+HKATI+PRG LGM
Sbjct: 454 EYAKDRIMMGSERKSAVISDESRKLTAYHEGGHALVAIHTEGARPVHKATIVPRGRTLGM 513
Query: 648 VTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVS 707
V+QLP DETS S+KQ+LA LDV M GRVAEELIFG +T+GASSD +AT++A MV+
Sbjct: 514 VSQLPEKDETSFSRKQMLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATKMARAMVT 573
Query: 708 NCGMSDAIGPVHIK---DRPSSEMQSR--IDAEVVKLLREAYDRVKALLKKHEKQLHALA 762
GMS +G V D S ++R I+ EV LL AY+ K +L KH K+ H LA
Sbjct: 574 KYGMSKQLGFVSYNYEDDGKSMSTETRLLIEQEVKSLLENAYNNAKTILTKHSKEHHVLA 633
Query: 763 NALLEYETLSAEEIKRILLPYREGQLPEQQEELEE 797
ALLE+ETL+ +IK+IL Q +QQE E
Sbjct: 634 QALLEHETLTGAQIKKILAQANSTQ--QQQEHAVE 666
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 528 bits (1361), Expect = e-149, Method: Compositional matrix adjust.
Identities = 296/591 (50%), Positives = 380/591 (64%), Gaps = 39/591 (6%)
Query: 234 TEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKS-- 291
++ L D +GK + Q + + + N P SE+ +V + V KS
Sbjct: 37 SQLLKDVDAGKIKSAEIAGQTVLAKTADNKTLTVNAPMNSEELVNRMVAKNADVKFKSGS 96
Query: 292 -RFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMP 350
F L+ + + VG VWL +Q G G G G S + E
Sbjct: 97 ISFLAILVQLLPILLVVG-VWLFLMRQMQG-----GAKGAMGFGKSKARLLTE------- 143
Query: 351 EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 410
KN TF+DV G D+AK+EL EVV++LK+P+KF RLGGK+PKG LL G PGTGKTL+A+A
Sbjct: 144 NKNRITFEDVAGVDEAKEELQEVVDFLKDPAKFQRLGGKIPKGALLVGPPGTGKTLIARA 203
Query: 411 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE 470
+AGEAGVPFF +GS+F EMFVGVGA RVR +F+ AKK APCIIFIDEIDAVG R
Sbjct: 204 VAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGL 263
Query: 471 G----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 526
G ++TL+QLLVEMDGFE NEGIIL+AATN PD+LDPAL RPGRFDR +VVPNPDV
Sbjct: 264 GGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDV 323
Query: 527 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 586
GR++I+ +++++ PLA DVDVK +ARGTPGF+GADLANLVN AA+ AA +T +
Sbjct: 324 AGREKIIRVHMKNVPLAADVDVKTLARGTPGFSGADLANLVNEAALMAARKNRRMVTMQD 383
Query: 587 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 646
E AKD+++MG ER++M ++EE KKLTAYHE GHAIVA N A P+HKATI+PRG ALG
Sbjct: 384 FEQAKDKVMMGAERRSMAMNEEEKKLTAYHEGGHAIVALNVPLADPVHKATIVPRGRALG 443
Query: 647 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 706
MV QLP D S+ +Q+ +RL + MGGRVAEE+IFG+++IT+GASSD+ +AT+LA MV
Sbjct: 444 MVMQLPEGDRYSMKYQQMTSRLAIMMGGRVAEEIIFGKENITSGASSDIKAATDLARNMV 503
Query: 707 SNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRVKALL 751
+ G SD +G V D S E ID+EV +L++ D + +L
Sbjct: 504 TRWGYSDILGTVAYGDNQDEVFLGHSVARTQNVSEETARLIDSEVKRLVQYGLDEARRIL 563
Query: 752 KKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPEQQEELEEDLVLA 802
LH L ALLEYETLS EEI IL +G P+++EE V+A
Sbjct: 564 TDKIDDLHTLGKALLEYETLSGEEIADIL----KGIPPKREEEEAATAVIA 610
>sp|O88967|YMEL1_MOUSE ATP-dependent zinc metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1
PE=2 SV=1
Length = 715
Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/433 (60%), Positives = 331/433 (76%), Gaps = 5/433 (1%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 276 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 334
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 394
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 515 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 574
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 575 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ E+ LLRE+Y+R K +LK H K+ LA ALL
Sbjct: 635 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLT 694
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 695 YETLDAKEIQIVL 707
>sp|Q925S8|YMEL1_RAT ATP-dependent zinc metalloprotease YME1L1 OS=Rattus norvegicus
GN=Yme1l1 PE=2 SV=1
Length = 715
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/433 (60%), Positives = 330/433 (76%), Gaps = 5/433 (1%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 276 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 334
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R ++
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPM 394
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T+ QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 395 HPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 515 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 574
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + + QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 575 LLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ E+ LLRE+Y+R K +LK H K+ LA ALL
Sbjct: 635 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLT 694
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 695 YETLDAKEIQIVL 707
>sp|Q96TA2|YMEL1_HUMAN ATP-dependent zinc metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1
PE=1 SV=2
Length = 773
Score = 515 bits (1326), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/433 (60%), Positives = 331/433 (76%), Gaps = 5/433 (1%)
Query: 352 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 411
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 334 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAV 392
Query: 412 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 471
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 393 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 452
Query: 472 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 529
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 453 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 512
Query: 530 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 589
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 513 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 572
Query: 590 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 649
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 573 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 632
Query: 650 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 709
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 633 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 692
Query: 710 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 767
GMS+ +G + D + S E QS I+ E+ LLR++Y+R K +LK H K+ LA ALL
Sbjct: 693 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLT 752
Query: 768 YETLSAEEIKRIL 780
YETL A+EI+ +L
Sbjct: 753 YETLDAKEIQIVL 765
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/533 (50%), Positives = 354/533 (66%), Gaps = 34/533 (6%)
Query: 269 NPGVSEKQPLHVVMVD--PKVSNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLG 326
+PG+ ++ + V + P+ S S F L S + + VG W+ +Q G
Sbjct: 78 DPGLVQRLNTNKVNIRAVPESSGNSIFLNLLFSLLPVLIIVG-AWIFFMRQMQG-----G 131
Query: 327 GIGTSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRL 386
G G G S + E V TFKDV G ++AKQ+L E+V++L+ P KF RL
Sbjct: 132 SRGALGFGKSKAKLLTEAQGRV-------TFKDVAGVEEAKQDLQEIVDFLREPQKFQRL 184
Query: 387 GGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAA 446
GG++P+G+LL G PGTGKTLLA++IAGEA VPFF +GS+F EMFVGVGA RVR +F+ A
Sbjct: 185 GGRIPRGVLLVGPPGTGKTLLARSIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQA 244
Query: 447 KKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLP 502
KK APCIIFIDEIDAVG R G ++TL+QLLVEMDGFE NE IIL+AATN P
Sbjct: 245 KKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEPNESIILIAATNRP 304
Query: 503 DILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGAD 562
D+LDPAL RPGRFDR +VVPNPDV GR++ILE+++++ PLA +V+++ +ARGTPGF+GAD
Sbjct: 305 DVLDPALLRPGRFDRQVVVPNPDVAGREKILEVHVRNVPLAPNVNLRVLARGTPGFSGAD 364
Query: 563 LANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAI 622
L NLVN AA+ AA + +T E E AKD+++MG ER++ +++E K+LTAYHE+GHAI
Sbjct: 365 LMNLVNEAALMAASRNKKVVTMQEFEDAKDKVMMGAERRSTAMTQEEKELTAYHEAGHAI 424
Query: 623 VAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIF 682
VA N + P+HKATI+PRG ALGMV QLP D S+S +++RL + MGGRVAEEL F
Sbjct: 425 VALNVPVSDPVHKATIVPRGRALGMVMQLPEGDRYSMSYLWMVSRLAIMMGGRVAEELKF 484
Query: 683 GRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------SSE 727
G+++IT+GA+SD+ AT+LA M++ G SD +G V D S E
Sbjct: 485 GKENITSGAASDIEQATKLARAMITRWGFSDMLGHVAYGDNQDEIFLGHSVARTQNISEE 544
Query: 728 MQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
IDAEV +L+ +AY +LK KQ ALA LLEYETL+ EI ++
Sbjct: 545 TARMIDAEVRRLIDDAYKTATKILKTQNKQWLALAQGLLEYETLTGTEINEVI 597
>sp|O59824|YME1_SCHPO ATP-dependent zinc metalloprotease YME1 homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC965.04c PE=3 SV=1
Length = 709
Score = 499 bits (1286), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/519 (49%), Positives = 360/519 (69%), Gaps = 25/519 (4%)
Query: 271 GVSEKQPLHVVMVDPKVSNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGT 330
G S K P++VV+ +P+ + R +F GL ++ Y LG
Sbjct: 195 GTSSKTPVYVVVDEPRFTKFFR---------IFKFIAGL-------SVASYFVLLGMSIF 238
Query: 331 SGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGK 389
+ ++ +E M E+ + F DV+G D+AK+EL E+V++L++P+ FTRLGGK
Sbjct: 239 AETSGLNNIMTNTTEQEPMEERAINVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGK 298
Query: 390 LPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKK 449
LP+G+LLTG PGTGKT+LA+A+AGEA VPFF+ +GS+F+EM+VGVGA+RVR LF AA+K+
Sbjct: 299 LPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQ 358
Query: 450 APCIIFIDEIDAVGSTRKQWEG-HTKKTLHQLLVEMDGFEQNEG----IILMAATNLPDI 504
AP IIFIDE+DA+G R + H ++TL+QLLV++DGF +NE ++ + ATN P+
Sbjct: 359 APSIIFIDELDAIGQKRNARDAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPES 418
Query: 505 LDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLA 564
LDPALTRPGRFDRHI VP PDVRGR IL + + PL DVD+ IARGT GF GADLA
Sbjct: 419 LDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLA 478
Query: 565 NLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVA 624
NL+N AA+ A+ + ++ +LE++KDRILMG ERK+ FI+ E+K +TAYHE GHA+VA
Sbjct: 479 NLINQAAVYASKNLSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVA 538
Query: 625 FNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGR 684
T+ A +KATIMPRGS+LGM LP D+ S ++++ LA LDV MGGR AEEL++G+
Sbjct: 539 LFTKNAMRPYKATIMPRGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGK 598
Query: 685 DHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIK---DRPSSEMQSRIDAEVVKLLR 741
D IT+GA +D+ AT++A MV+ GMSD IGPV ++ D S ++ +++E+ LL
Sbjct: 599 DKITSGAHNDIDKATQVARRMVTEFGMSDRIGPVSLEAEMDNLSPATRALVESEIKSLLE 658
Query: 742 EAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
+Y+R +LLK H+K+L ALA AL++YE L+AEE+ R++
Sbjct: 659 ASYERSLSLLKSHKKELDALATALVDYEFLTAEEMNRVV 697
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 179 ANANPKDPAKQTALLSELNKQSPEAVIKRFEQR 211
ANAN DP Q L EL PEA+I R+E +
Sbjct: 64 ANANMSDPYMQAKLYKELADNFPEAIISRYETQ 96
>sp|P32795|YME1_YEAST Mitochondrial inner membrane i-AAA protease supercomplex subunit
YME1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=YME1 PE=1 SV=1
Length = 747
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 274/617 (44%), Positives = 396/617 (64%), Gaps = 35/617 (5%)
Query: 178 EANANPKDPAKQTALLSEL-NKQSPEAVIKRFEQRDHEVDSRGVVEYLRAL------VAT 230
EAN + P Q A L P+ V+ RFE + Y+ AL
Sbjct: 110 EANKDLTSPDAQAAFYKLLLQSNYPQYVVSRFETPGIASSPECMELYMEALQRIGRHSEA 169
Query: 231 NAITEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGV--SEKQPLHVVMVDPKVS 288
+A+ + L S P+L +++ + N P + + S K+PLHVV+ + +
Sbjct: 170 DAVRQNLLTASSAGAVN-PSLASSSSNQSGYHGNFPSMYSPLYGSRKEPLHVVVSESTFT 228
Query: 289 NKSRFAQELI--STILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNK 346
SR+ + L+ + ++ + G ++ L K SS A K ++
Sbjct: 229 VVSRWVKWLLVFGILTYSFSEGFKYITENTTLLK---------------SSEVADKSVD- 272
Query: 347 EVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
+ + NVK F DV GCD+A+ EL E+V++LK+P+K+ LGGKLPKG+LLTG PGTGKTL
Sbjct: 273 --VAKTNVK-FDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTL 329
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LA+A AGEAGV FF+ +GSEF+E++VGVGA+R+R LF A+ +AP IIFIDE+DA+G R
Sbjct: 330 LARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKR 389
Query: 467 K-QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
+ + + K+TL+QLLVE+DGF Q GII++ ATN P+ LD ALTRPGRFD+ + V PD
Sbjct: 390 NPKDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPD 449
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
VRGR +IL+ +++ LAD+VD IARGTPG +GA+LANLVN AA+ A + +
Sbjct: 450 VRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAAVYACQKNAVSVDMS 509
Query: 586 ELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSAL 645
E+AKD+ILMG ERKTM +++ ++K TA+HE+GHAI+A T GA P++KATI+PRG AL
Sbjct: 510 HFEWAKDKILMGAERKTMVLTDAARKATAFHEAGHAIMAKYTNGATPLYKATILPRGRAL 569
Query: 646 GMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYM 705
G+ QLP D+ +++++ ARLDVCMGG++AEELI+G+D+ T+G SDL SAT A M
Sbjct: 570 GITFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAM 629
Query: 706 VSNCGMSDAIGPVHIKDR---PSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALA 762
V+ GMSD +GPV++ + S++++ D EV++LL+++ +R + LL K +LH LA
Sbjct: 630 VTQYGMSDDVGPVNLSENWESWSNKIRDIADNEVIELLKDSEERARRLLTKKNVELHRLA 689
Query: 763 NALLEYETLSAEEIKRI 779
L+EYETL A EI+++
Sbjct: 690 QGLIEYETLDAHEIEQV 706
>sp|Q9ZEA2|FTSH_RICPR ATP-dependent zinc metalloprotease FtsH OS=Rickettsia prowazekii
(strain Madrid E) GN=ftsH PE=3 SV=1
Length = 637
Score = 490 bits (1261), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 323/442 (73%), Gaps = 18/442 (4%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TFKDV G D+AK+EL E+V++L++PSKF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 153 TFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 212
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 471
VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEIDAVG R G
Sbjct: 213 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGND 272
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRFDR I V NPD+ GR++
Sbjct: 273 EREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQ 332
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++L+ V + IARGTPGF+GA+LANLVN AA+ AA G +++ ++E AK
Sbjct: 333 ILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAK 392
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
D++LMG R+++ +SE+ K+LTAYHE GHA+V A PIHKATI+PRG+ALGMV +L
Sbjct: 393 DKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRL 452
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P +DE S +++Q+ + + V M GRVAEE+IFGR+ +T+GASSD+ AT +A MV+ G+
Sbjct: 453 PETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGL 512
Query: 712 SDAIGPVHIKDRPSSEMQSR-------------IDAEVVKLLREAYDRVKALLKKHEKQL 758
SD IGP+ S +M R IDAEV +++ + Y+ K +L KH QL
Sbjct: 513 SDLIGPI-FHGSNSDDMYGRQSSNEISEATAELIDAEVKRIITQGYEFAKDILTKHIDQL 571
Query: 759 HALANALLEYETLSAEEIKRIL 780
H LANAL+EYETLS ++IK +L
Sbjct: 572 HTLANALIEYETLSGQQIKNLL 593
>sp|Q4UN68|FTSH_RICFE ATP-dependent zinc metalloprotease FtsH OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=ftsH PE=3 SV=1
Length = 635
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 323/442 (73%), Gaps = 18/442 (4%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TFKDV G D+AK+EL E+V++L++PSKF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 153 TFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 212
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 471
VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEIDAVG R G
Sbjct: 213 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGND 272
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRFDR I V NPD+ GR++
Sbjct: 273 EREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQ 332
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++L+ V + IARGTPGF+GA+LANLVN AA+ AA G +++ ++E AK
Sbjct: 333 ILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAK 392
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
D++LMG R+++ +SE+ K+LTAYHE GHA+V A P+HKATI+PRG+ALGMV +L
Sbjct: 393 DKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPLHKATIIPRGNALGMVQRL 452
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P +DE S +++Q+ + + V M GRVAEE+IFGR+ +T+GASSD+ AT +A MV+ G+
Sbjct: 453 PETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGL 512
Query: 712 SDAIGPVHIKDRPSSEMQSR-------------IDAEVVKLLREAYDRVKALLKKHEKQL 758
SD IGP+ S +M R IDAEV K++ + Y+ K +L KH QL
Sbjct: 513 SDLIGPI-FHGSSSDDMYGRQPSNETSEATAELIDAEVKKIITQGYEFAKDILTKHIDQL 571
Query: 759 HALANALLEYETLSAEEIKRIL 780
H LANAL+EYETLS ++IK +L
Sbjct: 572 HTLANALIEYETLSGQQIKNLL 593
>sp|Q92JJ9|FTSH_RICCN ATP-dependent zinc metalloprotease FtsH OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=ftsH PE=3 SV=1
Length = 637
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/442 (55%), Positives = 322/442 (72%), Gaps = 18/442 (4%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TFKDV G D+AK+EL E+V++L++PSKF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 153 TFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 212
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 471
VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEIDAVG R G
Sbjct: 213 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGND 272
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRFDR I V NPD+ GR++
Sbjct: 273 EREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQ 332
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++L+ V + IARGTPGF+GA+LANLVN AA+ AA G +++ ++E AK
Sbjct: 333 ILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAK 392
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
D++LMG R+++ +SE+ K+LTAYHE GHA+V A PIHKATI+PRG+ALGMV +L
Sbjct: 393 DKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRL 452
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P +DE S +++Q+ + + V M GRVAEE+IFGR+ +T+GASSD+ AT +A MV+ G+
Sbjct: 453 PETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGL 512
Query: 712 SDAIGPVHIKDRPSSEMQSR-------------IDAEVVKLLREAYDRVKALLKKHEKQL 758
SD IGP+ +M R IDAEV +++ + Y+ K +L KH QL
Sbjct: 513 SDLIGPI-FHGSSGDDMYGRQPNNETSEATAELIDAEVKRIITQGYEFAKDILTKHIDQL 571
Query: 759 HALANALLEYETLSAEEIKRIL 780
H LANAL+EYETLS ++IK +L
Sbjct: 572 HTLANALIEYETLSGQQIKNLL 593
>sp|Q68XR9|FTSH_RICTY ATP-dependent zinc metalloprotease FtsH OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=ftsH PE=3 SV=1
Length = 637
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/442 (55%), Positives = 323/442 (73%), Gaps = 18/442 (4%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TFKDV G D+AK+EL E+V++L++PSKF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 153 TFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 212
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 471
VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEIDAVG R G
Sbjct: 213 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGND 272
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRFDR I V NPD+ GR++
Sbjct: 273 EREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQ 332
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++L+ V + IARGTPGF+GA+LANLVN AA+ AA G +++ ++E AK
Sbjct: 333 ILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAK 392
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
D++LMG R+++ +SE+ K+LTAYHE GHA+V A PIHKATI+PRG+ALGMV +L
Sbjct: 393 DKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRL 452
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P +DE S +++Q+ + + V M GRVAEE+IFG++ +T+GA+SD+ AT +A MV+ G+
Sbjct: 453 PETDEYSQNREQMESSIAVYMAGRVAEEIIFGKNKVTSGAASDIKGATNIARAMVTKAGL 512
Query: 712 SDAIGPVHIKDRPSSEMQSR-------------IDAEVVKLLREAYDRVKALLKKHEKQL 758
SD IGP+ S +M R IDAEV K++ + Y+ K +L KH QL
Sbjct: 513 SDLIGPI-FHGSSSDDMYGRQQSNEISEATAKLIDAEVKKIITQGYEFAKDILTKHIDQL 571
Query: 759 HALANALLEYETLSAEEIKRIL 780
H LANAL+EYETLS ++IK +L
Sbjct: 572 HTLANALIEYETLSGQQIKNLL 593
>sp|C8WEG0|FTSH_ZYMMN ATP-dependent zinc metalloprotease FtsH OS=Zymomonas mobilis subsp.
mobilis (strain NCIB 11163) GN=ftsH PE=3 SV=1
Length = 662
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/444 (54%), Positives = 325/444 (73%), Gaps = 19/444 (4%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TFKD+ G ++A++EL E+V++LK+P++F+RLGGK+PKG LL G PGTGKTLLA+AIAGEA
Sbjct: 177 TFKDIAGIEEAREELEEIVDFLKDPTRFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEA 236
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT-- 473
GVPFF +GS+F EMFVGVGA RVR +F+ AKK APCIIFIDEIDAVG R G+
Sbjct: 237 GVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGNGND 296
Query: 474 --KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+QLLVEMDGFE NEGII++AATN PD+LDPAL RPGRFDR ++VP PD+ GR +
Sbjct: 297 EREQTLNQLLVEMDGFEANEGIIILAATNRPDVLDPALLRPGRFDRQVIVPRPDIEGRLK 356
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++++ PLA DVDV+ IARGTPGF+GADLAN+VN AA+ AA G + +E E AK
Sbjct: 357 ILQVHMKKTPLAPDVDVRTIARGTPGFSGADLANIVNEAALLAARKGKRLVAMSEFEEAK 416
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
D+++MG ER+++ ++EE K+ TAYHE+GHA+V+ + G P+HK T++PRG ALG+ L
Sbjct: 417 DKVMMGAERRSVIMTEEEKRSTAYHEAGHALVSLHIPGCDPLHKVTVIPRGRALGVTWNL 476
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P D+ S++ KQ+ ARL +C GGR+AE+L++G D + TGAS+D+ AT++A MV+ GM
Sbjct: 477 PERDQLSINIKQMKARLALCFGGRIAEQLVYGEDSLNTGASNDIQQATDMARAMVTEYGM 536
Query: 712 SDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEK 756
S +G + ++ S + ID EV L+ E R + +L +H
Sbjct: 537 SPKLGWLRYRENQDEVFLGHSVSRSQNISEDTAKIIDQEVRVLVEEGESRARQVLTEHID 596
Query: 757 QLHALANALLEYETLSAEEIKRIL 780
+LH LANAL+EYETLS EE KR +
Sbjct: 597 ELHRLANALIEYETLSGEEAKRAI 620
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/495 (51%), Positives = 337/495 (68%), Gaps = 24/495 (4%)
Query: 297 LISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKT 356
LIS + +G VW+ +Q GG T G S + + + +V T
Sbjct: 109 LISWFPMLLLIG-VWIFFMKQMQA-----GGNKTMTFGKSKARLLSDRSNKV-------T 155
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F DV G D+AK+EL E+VE+L+ P KF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 156 FHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAK 215
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----H 472
VPFF +GS+F EMFVGVGA RVR +F+ KK APC+IFIDEIDAVG R G
Sbjct: 216 VPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGNDE 275
Query: 473 TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 532
++TL+QLLVEMDGFE NEG+I++AATN PD+LDPAL RPGRFDR I + PD+ GRQ+I
Sbjct: 276 REQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKI 335
Query: 533 LELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 592
LE++L+ P A +V+V IARGTPGF+GADLANLVN +A+ AA + +T + E+A+D
Sbjct: 336 LEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDFEYARD 395
Query: 593 RILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLP 652
+ILMG ERK++ + EE K LTAYHE+GHA+ + E + PIHKATI+PRG ALG+V +LP
Sbjct: 396 KILMGMERKSLVMREEEKLLTAYHEAGHAVTSLKLEASDPIHKATIIPRGRALGLVMRLP 455
Query: 653 SSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMS 712
D S ++ ++ A L V MGGR AE++IFG D T+GA+SD+ AT LA MV+ GMS
Sbjct: 456 EHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDIKQATHLARSMVTKWGMS 515
Query: 713 DAIGPVHIKDRP-------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANAL 765
+ +GP+ ++ S EM + ID+EV +L+ +A +L ++ + LH +A AL
Sbjct: 516 EKVGPLLYGEQNDPNNHILSIEMSNLIDSEVKQLITDALKEATKILNENIESLHRIAKAL 575
Query: 766 LEYETLSAEEIKRIL 780
LEYETL+ +E+ +L
Sbjct: 576 LEYETLTGQELSDLL 590
>sp|Q1RGP0|FTSH_RICBR ATP-dependent zinc metalloprotease FtsH OS=Rickettsia bellii
(strain RML369-C) GN=ftsH PE=3 SV=1
Length = 638
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/519 (49%), Positives = 346/519 (66%), Gaps = 35/519 (6%)
Query: 281 VMVDPKVSNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYA 340
+ V P + + F LIS + +G VW+ + GG G G S +
Sbjct: 92 IEVVPPETRMNTFLSFLISWFPMLLLIG-VWVFFMRQMH------GGGKAMGFGKSKA-- 142
Query: 341 PKELNKEVMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGA 399
+++ +K K TFKDV G D+AK EL E+V++L++PSKF +LGGK+PKG LL G
Sbjct: 143 ------KLLSDKGPKITFKDVAGIDEAKDELTEIVDFLRDPSKFQKLGGKIPKGCLLIGP 196
Query: 400 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 459
PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEI
Sbjct: 197 PGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEI 256
Query: 460 DAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 515
DAVG R G ++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRF
Sbjct: 257 DAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDNALLRPGRF 316
Query: 516 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 575
DR I V NPD+ GR++IL+++L+ + + + IARGTPGF+GA+LANLVN A + AA
Sbjct: 317 DRQITVSNPDIDGREKILQVHLKKVKYSTKIVPRIIARGTPGFSGAELANLVNEATLIAA 376
Query: 576 VDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHK 635
+++ +LE AKD+++MG ER++M +S+E KKLTAYHE GHA+V + PIHK
Sbjct: 377 RRNKKEVEMHDLEEAKDKVMMGVERRSMIMSDEQKKLTAYHEGGHALVGLYCLASDPIHK 436
Query: 636 ATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDL 695
ATI+PRG ALGMV +LP +D S+ + ++ A + V M GRVAEE+IFG++ +T+GASSD+
Sbjct: 437 ATIIPRGRALGMVMRLPENDRFSMPRDKMEADIAVAMAGRVAEEIIFGKEKVTSGASSDI 496
Query: 696 HSATELAHYMVSNCGMSDAIGPVHIKDRPSSEMQSR--------------IDAEVVKLLR 741
AT +A MV++ G+SD +GPV+ S +M + ID EV K++
Sbjct: 497 KMATRMAKAMVTDWGLSDKVGPVY-HGSASEDMYTNRNSSSDRSESTSELIDEEVKKIVT 555
Query: 742 EAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
YD K +L KH QLH LA AL+EYETLS ++IK +L
Sbjct: 556 TGYDLAKDILTKHLDQLHILAKALIEYETLSGQQIKNLL 594
>sp|P0AAI4|FTSH_SHIFL ATP-dependent zinc metalloprotease FtsH OS=Shigella flexneri
GN=ftsH PE=3 SV=1
Length = 644
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 226 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 281
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 282 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 325
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 VQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 326 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 384
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 385 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 444
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 445 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 500
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 501 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 560
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSG 358
Query: 561 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 620
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 621 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 680
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 681 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 725
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 726 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 785
E ID EV L+ Y+R + LL + LHA+ +AL++YET+ A +I L+ R+
Sbjct: 539 DETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDD-LMARRD 597
Query: 786 GQLPEQQEE 794
+ P EE
Sbjct: 598 VRPPAGWEE 606
>sp|P0AAI3|FTSH_ECOLI ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli (strain
K12) GN=ftsH PE=1 SV=1
Length = 644
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 226 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 281
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 282 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 325
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 VQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 326 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 384
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 385 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 444
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 445 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 500
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 501 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 560
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSG 358
Query: 561 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 620
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 621 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 680
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 681 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 725
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 726 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 785
E ID EV L+ Y+R + LL + LHA+ +AL++YET+ A +I L+ R+
Sbjct: 539 DETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDD-LMARRD 597
Query: 786 GQLPEQQEE 794
+ P EE
Sbjct: 598 VRPPAGWEE 606
>sp|P63343|FTSH_SALTY ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ftsH PE=3 SV=1
Length = 644
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 226 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 281
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 282 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 325
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 INDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 326 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 384
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 385 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 444
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 445 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 500
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 501 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 560
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSG 358
Query: 561 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 620
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 621 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 680
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 681 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 725
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 726 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 785
E ID EV L+ Y+R + +L + LHA+ +AL++YET+ A +I L+ RE
Sbjct: 539 DETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDD-LMARRE 597
Query: 786 GQLPEQQEE 794
+ P E+
Sbjct: 598 VRPPAGWED 606
>sp|P63344|FTSH_SALTI ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhi GN=ftsH
PE=3 SV=1
Length = 644
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 226 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 281
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 282 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 325
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 INDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 326 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 384
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 385 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 444
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 445 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 500
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 501 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 560
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSG 358
Query: 561 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 620
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 621 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 680
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 681 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 725
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 726 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 785
E ID EV L+ Y+R + +L + LHA+ +AL++YET+ A +I L+ RE
Sbjct: 539 DETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDD-LMARRE 597
Query: 786 GQLPEQQEE 794
+ P E+
Sbjct: 598 VRPPAGWED 606
>sp|Q8X9L0|FTSH_ECO57 ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli O157:H7
GN=ftsH PE=3 SV=1
Length = 644
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 226 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 281
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 282 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 325
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 VQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 326 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 384
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 385 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 444
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 445 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 500
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 501 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 560
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSG 358
Query: 561 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 620
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 621 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 680
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 681 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 725
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 726 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 785
E ID EV L+ Y+R + LL + LHA+ +AL++YET+ A +I L+ R+
Sbjct: 539 DETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDD-LMARRD 597
Query: 786 GQLPEQQEE 794
+ P EE
Sbjct: 598 VRPPAGWEE 606
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/491 (50%), Positives = 328/491 (66%), Gaps = 34/491 (6%)
Query: 310 VWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVK-TFKDVKGCDDAKQ 368
VW+ + + S GG G G S + ++M +K K TF+DV G ++AK+
Sbjct: 117 VWIY----FMRQMQSGGGRGAMSFGKSKA--------KLMSDKAAKVTFQDVAGIEEAKE 164
Query: 369 ELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFE 428
EL EVV++LK+P KF RLGGK+PKG+LL G PGTGKTLLA+AIAGEA VPFF +GS+F
Sbjct: 165 ELQEVVQFLKDPHKFQRLGGKIPKGVLLVGPPGTGKTLLARAIAGEANVPFFNLSGSDFV 224
Query: 429 EMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW--EGHTKK--TLHQLLVEM 484
EMFVGVGA RVR +F+ KK APCIIFIDEIDAVG R GH ++ TL+QLLVEM
Sbjct: 225 EMFVGVGAARVRDMFEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEM 284
Query: 485 DGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLAD 544
DGFE EG+I++AATN PD+LDPAL RPGRFDR + VPNPD+ GR +IL++++ PL+D
Sbjct: 285 DGFESTEGVIMVAATNRPDVLDPALLRPGRFDRQVTVPNPDILGRTQILKVHMNKVPLSD 344
Query: 545 DVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMF 604
VD + IAR TPGF+GADLANLVN AA+ AA + + E AKD+++MG R++
Sbjct: 345 SVDAEVIARATPGFSGADLANLVNEAALIAAQLDKRVVEMEDFENAKDKVMMGKPRRSAV 404
Query: 605 ISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQL 664
ISE+ +K TAYHE+GHA+VA +GA P+HK TI+PRG ALG+ QLP D + S+ QL
Sbjct: 405 ISEKERKTTAYHEAGHAVVAMALDGADPVHKVTIIPRGRALGLTMQLPLEDRYTYSKVQL 464
Query: 665 LARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP 724
+ + MGGR+AEEL+ + +TTGA +D+ AT+LA M+ + GMSD +GP+ +
Sbjct: 465 EQNIAILMGGRLAEELVL--NQLTTGAGNDIQRATDLARKMICSYGMSDTLGPLTYGENE 522
Query: 725 ---------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYE 769
S E RIDAEV ++ Y R K +L + LH +A ALLE E
Sbjct: 523 QEIFLGREITQHKSVSEETARRIDAEVFDIVDRNYKRAKQILTDKMEVLHTMAQALLERE 582
Query: 770 TLSAEEIKRIL 780
T+ A+E+ +++
Sbjct: 583 TIDADEVIKLM 593
>sp|A9EXK6|FTSH4_SORC5 ATP-dependent zinc metalloprotease FtsH 4 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH4 PE=3 SV=1
Length = 648
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/480 (52%), Positives = 326/480 (67%), Gaps = 28/480 (5%)
Query: 331 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 390
+G G + S+ K + + +N TF DV G D+AK EL E++ +LK+P KF +LGG++
Sbjct: 139 AGGGKAMSFG-KSRARLLSEAQNKVTFADVAGIDEAKDELEEIIAFLKDPKKFQKLGGRI 197
Query: 391 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 450
PKG+L+ G PGTGKTLLA+AIAGEAGVPFF +GS+F EMFVGVGA RVR LF+ KK A
Sbjct: 198 PKGVLMMGPPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKHA 257
Query: 451 PCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILD 506
PCIIFIDEIDAVG R G ++TL+QLLVEMDGFE NEG+I++AATN PD+LD
Sbjct: 258 PCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVIIVAATNRPDVLD 317
Query: 507 PALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 566
PA+ RPGRFDR IVV PDVRGR+ IL ++ + PL DVD++ +ARGTPGF GAD+ NL
Sbjct: 318 PAILRPGRFDRRIVVNRPDVRGREGILRVHTKKVPLGPDVDMEILARGTPGFVGADIENL 377
Query: 567 VNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFN 626
VN AA+ AA + ++ + E AKD++LMG ER++M IS+E K+ TAYHE+GHA+VA
Sbjct: 378 VNEAALLAARQDKDVVSMVDFEMAKDKVLMGAERRSMVISDEEKRTTAYHEAGHALVAKL 437
Query: 627 TEG-AHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRD 685
E + P+HK TI+PRG ALG+ QLP D S+S+ ARL V MGGRVAEE++FG
Sbjct: 438 LEKFSDPVHKVTIIPRGPALGLTQQLPKEDRLSMSRDFAKARLSVLMGGRVAEEIVFG-- 495
Query: 686 HITTGASSDLHSATELAHYMVSNCGMSDAIGPVHI---------------KDRPSSE-MQ 729
TTGA +D+ A+ LA MV+ GMSD IGP+ + R SE +
Sbjct: 496 QFTTGAGNDIKQASNLARRMVTEFGMSDVIGPISYGADEESVFLGRDFTSRRRDYSETIA 555
Query: 730 SRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL----LPYRE 785
++ID EV + + +A+ + LL + + L LA ALLE ETL AEE+ I+ LP R+
Sbjct: 556 NQIDDEVRRFILDAHAEARQLLTDNREILERLATALLERETLDAEEVDAIVGGRELPQRQ 615
>sp|D1BLD0|FTSH_VEIPT ATP-dependent zinc metalloprotease FtsH OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=ftsH
PE=3 SV=1
Length = 642
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/467 (54%), Positives = 329/467 (70%), Gaps = 23/467 (4%)
Query: 347 EVMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
++M E NVK +FKDV G ++AKQEL EVVE+LK+P KFT +G K+PKG+LL G PGTGKT
Sbjct: 142 KLMGEGNVKVSFKDVAGAEEAKQELEEVVEFLKDPGKFTTIGAKIPKGVLLAGPPGTGKT 201
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA+AGEAGVPFF +GS+F EMFVGVGA RVR LF AKK APCIIFIDEIDAVG
Sbjct: 202 LLAKAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFTQAKKNAPCIIFIDEIDAVGRQ 261
Query: 466 RKQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R GH ++ TL+QLLVEMDGF NEGII +AATN PDILDPAL RPGRFDR ++V
Sbjct: 262 RGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATNRPDILDPALLRPGRFDRQVIV 321
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 581
PD+RGR+ IL+++ ++KPLADDVD+K IA+ TPGF GADL+NL+N AA+ AA +
Sbjct: 322 GRPDLRGREAILKVHARNKPLADDVDLKIIAKKTPGFTGADLSNLLNEAALLAARLNKKV 381
Query: 582 LTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR 641
+T E+E A +++ MG ER++ +S++ +KLTAYHESGHAIVA A P+HK TI+PR
Sbjct: 382 ITMAEVEEASEKVSMGPERRSHIVSDKDRKLTAYHESGHAIVAHLLPHADPVHKVTIIPR 441
Query: 642 GSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 701
G+A G LP+ ++ ++ QLLA + V +GGR+AE LI D I+TGAS DL S T
Sbjct: 442 GAAGGYTMMLPTEEQNYKTKSQLLADIRVALGGRIAEALIL--DEISTGASGDLQSVTNT 499
Query: 702 AHYMVSNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDR 746
A MV+ GMSD +GP+ ++ S E+ ++ID+E+ +++ EAY
Sbjct: 500 ARAMVTRWGMSDELGPIVFGEQQEQIFLGKNLGHERNYSEEIAAKIDSEIHRIVEEAYKD 559
Query: 747 VKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPEQQE 793
V LL +EK LH +ANALLE ET+ A+ + L Y + PE +E
Sbjct: 560 VTKLLSDNEKFLHDMANALLEEETIDAKAVDN-LYKYGTTKEPEAEE 605
>sp|P54813|YME1_CAEEL ATP-dependent zinc metalloprotease YME1 homolog OS=Caenorhabditis
elegans GN=ymel-1 PE=3 SV=2
Length = 723
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/515 (49%), Positives = 334/515 (64%), Gaps = 39/515 (7%)
Query: 284 DPKVSNK-SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPK 342
D K SN +RF L+ I F G + + +G +GS P+
Sbjct: 191 DGKKSNTLTRFYIFLVFCIFFGYLTGRIRVR--------------VGDRQIGSLFFSNPQ 236
Query: 343 ELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGT 402
E+N PE TF DV+G D+AK E+ E+V+YLK+P K++RLGG+LPKG+LL G PGT
Sbjct: 237 EVN----PEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGT 292
Query: 403 GKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAV 462
GKTLLA+AIAGEA VPFF+ AGSEF+E+ VG GARRVR LF AK +APCIIFIDEID+V
Sbjct: 293 GKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV 352
Query: 463 GSTRKQWEGH--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIV 520
GS R H +T++QLL EMDGF +NEGII++AATN D LD AL RPGRFD +
Sbjct: 353 GSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVT 412
Query: 521 VPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGE 580
VP PD+ GR +I YL + +D K +A+G+ GF GAD+ N+VN AA+KAA D
Sbjct: 413 VPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAV 472
Query: 581 KLTATELEFAKDRILMGTERKTMFI-SEESKKLTAYHESGHAIVAFNTEGAHPIHKATIM 639
++T L+ A+DR+LMG R I EE+ + TAYHE+GH +V+ T+ A P+HK TI+
Sbjct: 473 EVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTII 532
Query: 640 PRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSAT 699
PRG +LG LP D +++ Q+LA LDV MGGRVAEELIFG D +TTGA+ DL AT
Sbjct: 533 PRGQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKAT 592
Query: 700 ELAHYMVSNCGMSDAIGPVHIKDRPSSEMQSR--------------IDAEVVKLLREAYD 745
+LA MV GMSD +G ++D + + +S IDAE+ ++L+E+Y
Sbjct: 593 QLAVQMVKVFGMSDKVG---LRDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYK 649
Query: 746 RVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
R K +L+ +K+ LA ALLEYETLSA+E+KR++
Sbjct: 650 RAKVILETKKKEHQLLAEALLEYETLSADEVKRVI 684
>sp|C1F8X6|FTSH_ACIC5 ATP-dependent zinc metalloprotease FtsH OS=Acidobacterium
capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
GN=ftsH PE=3 SV=1
Length = 639
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 244/469 (52%), Positives = 322/469 (68%), Gaps = 23/469 (4%)
Query: 331 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 390
SG + S+ M +K V TFKDV G D+AK+EL E++E+L+ KF +LGG++
Sbjct: 130 SGGNKALSFGKSRARLLSMQQKKV-TFKDVAGVDEAKEELKEIIEFLREAQKFQKLGGRI 188
Query: 391 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 450
PKG+LL G PGTGKTLLA+A+AGEA VPFF +GS+F EMFVGVGA RVR LF+ KK A
Sbjct: 189 PKGVLLVGPPGTGKTLLARAVAGEANVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNA 248
Query: 451 PCIIFIDEIDAVGSTRKQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILD 506
PCIIFIDEIDAVG R GH ++ TL+QLLVEMDGFE N+G+IL+AATN PD+LD
Sbjct: 249 PCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEANDGVILVAATNRPDVLD 308
Query: 507 PALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 566
PAL RPGRFDR +VV PDVRGR+E+L ++ + PLA+DVD++ +ARGTPGF+GADLAN+
Sbjct: 309 PALLRPGRFDRRVVVGRPDVRGREEVLRVHAKKVPLAEDVDLRVLARGTPGFSGADLANM 368
Query: 567 VNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFN 626
VN A+ AA + +T + E AKD++LMG ERK+M +++E K++TAYHESGHAIVA
Sbjct: 369 VNEGALSAARANRKVVTMQDFESAKDKVLMGAERKSMLLTDEEKRVTAYHESGHAIVAAM 428
Query: 627 TEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDH 686
+ A P+HK TI+PRG ALG+ QLP D+ +V++ L +L + MGGR+AEE+
Sbjct: 429 RKHADPLHKVTIIPRGMALGVTMQLPEEDKHTVTKDYLETQLAILMGGRIAEEIFL--HQ 486
Query: 687 ITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------SSEMQSR 731
+TTGA +D+ ATE+A MV GMS +GP+ + S E +
Sbjct: 487 MTTGAGNDIERATEMARKMVCEYGMS-RLGPLTYGKKEEQIFLGREIAQHRDFSEETARQ 545
Query: 732 IDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
IDAEV L+ EAY LL ++ +H +A ALLE ET+ A +I+ I+
Sbjct: 546 IDAEVRSLVDEAYRASYQLLNDNQPIMHKMAAALLERETIDANDIRMII 594
>sp|P71377|FTSH_HAEIN ATP-dependent zinc metalloprotease FtsH OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ftsH PE=3
SV=1
Length = 635
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/507 (48%), Positives = 340/507 (67%), Gaps = 32/507 (6%)
Query: 293 FAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEK 352
+Q LIS VG VW+ +Q GG G S + K LN++ +
Sbjct: 99 LSQILISWFPMLFLVG-VWVFFMRQMQG-----GGGKAMSFGKSRA---KMLNQDQIK-- 147
Query: 353 NVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
TF DV GCD+AK+E+ E+V++L++P+KF LGGK+PKGIL+ G PGTGKTLLA+AIA
Sbjct: 148 --VTFADVAGCDEAKEEVGEIVDFLRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIA 205
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW--E 470
GEA VPFF +GS+F EMFVGVGA RVR +F+ AKK APC+IFIDEIDAVG R
Sbjct: 206 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGG 265
Query: 471 GHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
GH ++ TL+Q+LVEMDGF N+G+I++AATN PD+LDPALTRPGRFDR +VV PDV+G
Sbjct: 266 GHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKG 325
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
R++IL+++++ +A DVD +ARGTPG++GADLANLVN AA+ AA +T E E
Sbjct: 326 REQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFE 385
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMV 648
AKD+I MG ER+TM ++++ K+ TAYHE+GHAIV + P+HK TI+PRG ALG+
Sbjct: 386 KAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVT 445
Query: 649 TQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSN 708
LP D+ S+SQKQL ++L GR+AE+LI+G ++I+TGAS+D+ AT +A MV+
Sbjct: 446 FFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQ 505
Query: 709 CGMSDAIGPV-HIKDRP--------------SSEMQSRIDAEVVKLLREAYDRVKALLKK 753
G S+ +GP+ + +D S E ID EV ++ Y R + +L
Sbjct: 506 WGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILID 565
Query: 754 HEKQLHALANALLEYETLSAEEIKRIL 780
+ LHA+ +AL++YET+ E+IK+++
Sbjct: 566 NMDILHAMKDALVKYETIEEEQIKQLM 592
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/447 (53%), Positives = 314/447 (70%), Gaps = 21/447 (4%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TF DV G D+A QEL E+ E+L+NP KF +LG ++PKG LL G PGTGKTLLA+A+AGEA
Sbjct: 187 TFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLARAVAGEA 246
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW--EGHT 473
GVPFF +GS+F EMFVGVGA RVR LF+ AK+ +PCIIF+DEIDAVG R GH
Sbjct: 247 GVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHD 306
Query: 474 KK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++ TL+QLLVEMDGF+ GII++AATN PDILDPAL RPGRFDR IVV PD+ GR +
Sbjct: 307 EREQTLNQLLVEMDGFDSKSGIIMLAATNRPDILDPALLRPGRFDRQIVVDRPDLPGRIK 366
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++ + KPL +DVD++ IARGTPGF GADLANLVN AA+ AA E++ E+E A
Sbjct: 367 ILKVHTRGKPLGEDVDIETIARGTPGFTGADLANLVNEAALLAARHNKEQIEMAEMEEAI 426
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
DR++ G ERKT ISE+ K++TAYHE+GHAIV A P+HK TI+PRG ALG+ L
Sbjct: 427 DRVIAGPERKTRLISEKEKEITAYHEAGHAIVGALLPEADPVHKVTIIPRGQALGVTMSL 486
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P D +S+ QL+A+L +GGR AE ++F + ITTGAS+D+ AT++A MV+ GM
Sbjct: 487 PEEDRFMMSRAQLMAQLSYMLGGRAAERVVF--EEITTGASNDIERATKVARQMVTRYGM 544
Query: 712 SDAIGPV---------------HIKDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEK 756
S+ +G + H + S E+ +ID E+ +L+ EAYD + LL ++ +
Sbjct: 545 SEKLGLIALGQHDGQVFMGRDLHAQPDYSDEIAFQIDKEIRRLVDEAYDTAEDLLVRNRR 604
Query: 757 QLHALANALLEYETLSAEEIKRILLPY 783
L LA+ L+EYET+ AE ++R++ Y
Sbjct: 605 LLEKLASDLIEYETVDAEHLRRLVEEY 631
>sp|Q6LUJ8|FTSH_PHOPR ATP-dependent zinc metalloprotease FtsH OS=Photobacterium profundum
GN=ftsH PE=3 SV=1
Length = 696
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/463 (50%), Positives = 320/463 (69%), Gaps = 20/463 (4%)
Query: 348 VMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 406
+M E +KT F DV GCD+AK+++ E+V+YL++PS+F +LGGK+P GILL G PGTGKTL
Sbjct: 168 MMSEDQIKTTFADVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGILLVGPPGTGKTL 227
Query: 407 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 466
LAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ AKK APCIIFIDEIDAVG R
Sbjct: 228 LAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQR 287
Query: 467 KQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 522
G ++TL+Q+LVEMDGFE NEG+I++AATN PD+LDPAL RPGRFDR +VV
Sbjct: 288 GAGVGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVG 347
Query: 523 NPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 582
PDVRGR++IL+++++ PL DV+ IARGTPGF+GADLANLVN AA+ AA +
Sbjct: 348 LPDVRGREQILKVHMRKVPLEGDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRVV 407
Query: 583 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 642
+ E E AKD+I+MG ERK+M +SE+ K+ TAYHE+GHAI+ P++K +I+PRG
Sbjct: 408 SMQEFELAKDKIMMGAERKSMVMSEDQKESTAYHEAGHAIIGRLVPDHDPVYKVSIIPRG 467
Query: 643 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 702
ALG+ LP D S S++ L + L GGR+AEELI+G D ++TGAS+D+ AT++A
Sbjct: 468 RALGVTMYLPEKDRISHSREFLESMLSSLYGGRLAEELIYGVDKVSTGASNDIERATDIA 527
Query: 703 HYMVSNCGMSDAIGPVHIKD---------------RPSSEMQSRIDAEVVKLLREAYDRV 747
MV+ G S+ +GPV D S + ID E+ L+ Y+R
Sbjct: 528 RKMVTQWGFSEKMGPVLYADDEGEVFLGRSVTQTKHMSDDTARAIDMEIRALIDRNYERA 587
Query: 748 KALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPE 790
+ +L ++ +HA+ +AL++YET+ A +I ++ E + P+
Sbjct: 588 REILAQNMDIMHAMKDALMKYETIDAAQIDDLMARKSEIRAPK 630
>sp|Q89AF2|FTSH_BUCBP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=ftsH PE=3 SV=1
Length = 610
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/511 (48%), Positives = 344/511 (67%), Gaps = 33/511 (6%)
Query: 290 KSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVM 349
+S F IS + +G VW+ +Q +G GG G G S + ++
Sbjct: 96 QSFFTAIFISWFPMLLLIG-VWVFFMRQMQ--VG--GGKGAMSFGKSKA--------RML 142
Query: 350 PEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 408
PE VK TF DV GCD+AK+E+ E+VEYLK PS+F +LGGK+PKGIL+ G PGTGKTLLA
Sbjct: 143 PEDQVKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLA 202
Query: 409 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ 468
KAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ ++K APCIIFIDEIDAVG R
Sbjct: 203 KAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGA 262
Query: 469 WEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 524
G ++TL+Q+LVEMDGF+ NEGIIL+AATN PD+LDPAL RPGRFDR I V P
Sbjct: 263 GLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALP 322
Query: 525 DVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 584
D+RGR++I++++++ PL ++VD IARGTPGF+GADLANLVN AA+ AA + + +
Sbjct: 323 DIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMM 382
Query: 585 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 644
++ E AKD+I MG+ER++M ++E+ K+ TAYHE+GH IV P HK TI+PRG A
Sbjct: 383 SDFESAKDKITMGSERRSMVMTEKQKESTAYHEAGHVIVGRLVPEHDPAHKVTIIPRGRA 442
Query: 645 LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHY 704
LG+ LP D S+++ +L +++ GGR+AEE+I+G ++++TGA +D+ AT LA
Sbjct: 443 LGVTFFLPKDDVLSINKNKLESQISTLYGGRLAEEIIYGVNNVSTGAHNDIKVATNLARN 502
Query: 705 MVSNCGMSDAIGPVH--------------IKDRPSSEMQSRIDAEVVKLLREA-YDRVKA 749
MV+ G S +GP+ K + S+ +RI E VKLL E Y+R K
Sbjct: 503 MVTQWGFSKKLGPLLYSEEEGEIFLGRTVTKSKHMSDETARIIDEEVKLLVEKNYNRAKK 562
Query: 750 LLKKHEKQLHALANALLEYETLSAEEIKRIL 780
+L+++ LHA+ +AL++YET+++ +I ++
Sbjct: 563 ILEENLDILHAMKDALIKYETINSRQIDDLM 593
>sp|Q8K9G8|FTSH_BUCAP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsH PE=3 SV=1
Length = 613
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/508 (48%), Positives = 343/508 (67%), Gaps = 33/508 (6%)
Query: 310 VWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQ 368
VW+ +Q +G GG G G S + ++ E ++T F DV GCD+AK+
Sbjct: 115 VWIFFMRQMQ--MG--GGKGAMSFGKSKA--------RMLSEDQIQTTFADVAGCDEAKE 162
Query: 369 ELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFE 428
E+ E+VEYLK PS+F +LGGK+PKGIL+ G PGTGKTLLAKAIAGEA VPFF +GS+F
Sbjct: 163 EVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFV 222
Query: 429 EMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEM 484
EMFVGVGA RVR +F+ A+K APCIIFIDEIDAVG R G ++TL+Q+LVEM
Sbjct: 223 EMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEM 282
Query: 485 DGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLAD 544
DGF+ NEG+IL+AATN PD+LDPAL RPGRFDR ++V PDVRGR++IL+++++ PL++
Sbjct: 283 DGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSE 342
Query: 545 DVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMF 604
DVD IARGTPGF+GADLANLVN AA+ AA ++ E AKD+I+MG+ER++M
Sbjct: 343 DVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMV 402
Query: 605 ISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQL 664
+S+ K+ TAYHE+GH I+ P HK TI+PRG ALG+ LP SD S+S+++L
Sbjct: 403 MSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDILSISRQKL 462
Query: 665 LARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHI---- 720
+++ GGR+AEE+I+G +++TGA +D+ AT LA MV+ G SD +GP+
Sbjct: 463 ESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEE 522
Query: 721 ----------KDRPSSEMQSRIDAEVVKLLREA-YDRVKALLKKHEKQLHALANALLEYE 769
K + S+ +RI E VKLL E Y+R + +L ++ LHA+ +AL++YE
Sbjct: 523 GEVFLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYE 582
Query: 770 TLSAEEIKRILLPYREGQLPEQQEELEE 797
T+ + +I L+ RE + P+ E+++
Sbjct: 583 TIDSLQIDD-LMERREVRKPKGWLEVDQ 609
>sp|B4SCV5|FTSH_PELPB ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ftsH
PE=3 SV=1
Length = 662
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/482 (50%), Positives = 329/482 (68%), Gaps = 25/482 (5%)
Query: 329 GTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLG 387
G +G + + ++ + +++ E VKT FKDV G D+A +EL E VE+L NP KF ++G
Sbjct: 180 GQNGAQAKNIFSFGKSRAKMVSEFEVKTTFKDVAGVDEAIEELQETVEFLTNPEKFQKIG 239
Query: 388 GKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAK 447
GK+PKG+LL G PGTGKTLLAKAIAGEA VPFF +G++F EMFVGVGA RVR LF+ AK
Sbjct: 240 GKIPKGVLLLGPPGTGKTLLAKAIAGEAKVPFFSISGADFVEMFVGVGAARVRDLFEQAK 299
Query: 448 KKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPD 503
K APCIIFIDEIDAVG +R G ++TL+QLLVEMDGF NE +IL+AATN PD
Sbjct: 300 KNAPCIIFIDEIDAVGRSRGAGLGGGHDEREQTLNQLLVEMDGFTTNENVILIAATNRPD 359
Query: 504 ILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADL 563
+LD AL RPGRFDR I + PD+RGR+ IL+++ ++ PL DVD+ +A+ +PGF+GADL
Sbjct: 360 VLDSALLRPGRFDRQITIDKPDIRGREAILKIHTRNTPLDGDVDITVLAKSSPGFSGADL 419
Query: 564 ANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIV 623
ANLVN AA+ AA +TA E A+D+ILMG ER++MFIS+E KKLTAYHE+GH +V
Sbjct: 420 ANLVNEAALLAARHEQVLITAVNFEQARDKILMGPERRSMFISDEQKKLTAYHEAGHVLV 479
Query: 624 AFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFG 683
+ +T+G+ PIHK TI+PRG +LG+ LP D + +++ LLA + +GGRVAEEL+F
Sbjct: 480 SIHTKGSDPIHKVTIIPRGRSLGLTAYLPLEDRYTHNREYLLAMITYALGGRVAEELVF- 538
Query: 684 RDHITTGASSDLHSATELAHYMVSNCGMSDAIGPV----------------HIKDRPSSE 727
+TGA++D+ AT++A MV GMS+++GP+ HI++ S E
Sbjct: 539 -QECSTGAANDIEKATDIARRMVRQWGMSESLGPINYGDSHKEVFLGKDYSHIREY-SEE 596
Query: 728 MQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQ 787
+ID EV ++ + K +L + LH LA L+E E+L+A EI+ I P +G
Sbjct: 597 TALQIDVEVRNIIMGCMENAKTVLSEQLAVLHRLAGILIEKESLNAREIQEITGP-GQGA 655
Query: 788 LP 789
LP
Sbjct: 656 LP 657
>sp|Q1D491|FTSH_MYXXD ATP-dependent zinc metalloprotease FtsH OS=Myxococcus xanthus
(strain DK 1622) GN=ftsH PE=3 SV=1
Length = 638
Score = 457 bits (1177), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/459 (51%), Positives = 326/459 (71%), Gaps = 24/459 (5%)
Query: 353 NVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 412
N TF DV G D+ K+EL E+V +LK+P KFT+LGG++PKG+L+ G+PGTGKTLLA+A+A
Sbjct: 150 NKVTFADVAGADECKEELEEIVAFLKDPKKFTKLGGRIPKGVLMMGSPGTGKTLLARAVA 209
Query: 413 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG- 471
GEAGVPFF +GS+F EMFVGVGA RVR LF+ KK APCIIFIDEIDAVG R G
Sbjct: 210 GEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGAGLGG 269
Query: 472 ---HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 528
++TL+QLLVEMDGFE N+G+IL+AATN PD+LDPAL RPGRFDR IVVP PDV+G
Sbjct: 270 GHDEREQTLNQLLVEMDGFESNDGVILIAATNRPDVLDPALQRPGRFDRRIVVPRPDVKG 329
Query: 529 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 588
R +L+++ + PLA +VD++ IARGTPG GADL NLVN +A+ AA E++ ++ E
Sbjct: 330 RLGVLKVHTRRVPLAPEVDLEVIARGTPGMTGADLENLVNESALMAARQNKERVDLSDFE 389
Query: 589 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMV 648
AKD++ MG ER++M ++E+ KK TA HE+GHA++A G P+HK TI+PRG ALG+
Sbjct: 390 AAKDKVFMGPERRSMIMTEKEKKNTAVHEAGHALLAKLLPGCDPLHKVTIIPRGQALGVT 449
Query: 649 TQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSN 708
LP+ D+ + +KQ+L ++ + MGGR+AEEL+F + +++GA++D+ ATE A MV
Sbjct: 450 WSLPTEDKVNGYKKQMLDQISMAMGGRIAEELMF--NEMSSGAANDIERATETARAMVCR 507
Query: 709 CGMSDAIGPVHI----------KDRPSSEMQS-----RIDAEVVKLLREAYDRVKALLKK 753
GMS+ +GP+ +D SS+ S +IDAEV ++ Y+R K LL +
Sbjct: 508 WGMSEKMGPLAFGKSDGEVFLGRDFNSSKDYSEDTARQIDAEVRNIVVGCYERGKNLLTE 567
Query: 754 HEKQLHALANALLEYETLSAEEIKRILLPYREGQLPEQQ 792
+ + L +++AL+EYETL AE++ +L + GQL ++
Sbjct: 568 NIEALRRVSDALVEYETLDAEDVNILL---QGGQLTRER 603
>sp|P57462|FTSH_BUCAI ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=ftsH PE=3
SV=2
Length = 611
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/520 (48%), Positives = 345/520 (66%), Gaps = 34/520 (6%)
Query: 291 SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMP 350
S F LIS + +G VW+ +Q +G GG G G S + ++
Sbjct: 97 SLFISILISWFPMLLLIG-VWIFFMRQMQ--MG--GGKGAMSFGKSKA--------RMLS 143
Query: 351 EKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 409
E ++T F DV GCD+AK+E+ E+VEYLK PS+F +LGGK+PKGIL+ G PGTGKTLLAK
Sbjct: 144 EDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAK 203
Query: 410 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 469
AIAGEA VPFF +GS+F EMFVGVGA RVR +F+ ++K APCIIFIDEIDAVG R
Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAG 263
Query: 470 EG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 525
G ++TL+Q+LVEMDGF+ NEGIIL+AATN PD+LDPAL RPGRFDR ++V PD
Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPD 323
Query: 526 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 585
+RGR++IL+++++ PL+ DVD IARGTPGF+GADLANLVN AA+ AA ++
Sbjct: 324 IRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSML 383
Query: 586 ELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSAL 645
E E AKD+++MG+ER++M +S+ K+ TAYHE+GH I+ P HK TI+PRG AL
Sbjct: 384 EFERAKDKMMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRAL 443
Query: 646 GMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYM 705
G+ LP SD S+S+++L +++ GGR+AEE+I+G +++TGA +D+ AT LA M
Sbjct: 444 GVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNM 503
Query: 706 VSNCGMSDAIGPVHI--------------KDRPSSEMQSRIDAEVVKLLREA-YDRVKAL 750
V+ G S+ +GP+ K + S+ +RI E VKLL E Y R + +
Sbjct: 504 VTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNI 563
Query: 751 LKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPE 790
L ++ LHA+ AL++YET+ A +I L+ RE + P+
Sbjct: 564 LNENIDILHAMKEALIKYETIDAFQIDD-LMKRREVRQPK 602
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/520 (47%), Positives = 340/520 (65%), Gaps = 33/520 (6%)
Query: 281 VMVDPKVSNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYA 340
+ V + S S F ++ T++ T+ +VWL +L G T ++ Y
Sbjct: 95 IKVSGERSGSSSFWINVLGTLIPTILFIVVWLFIMRSLS---GRNNQAFTFTKSRATMYK 151
Query: 341 PKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAP 400
P NK V TFKDV G ++A +EL EVVE+LK+PSKF R+G ++PKGILL G P
Sbjct: 152 PSG-NKRV-------TFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPP 203
Query: 401 GTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEID 460
GTGKTLLA+A+AGEA VPFF+ +GS+F E+FVGVGA RVR LF AK APCI+FIDEID
Sbjct: 204 GTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEID 263
Query: 461 AVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFD 516
AVG R G ++TL+QLLVEMDGF+ EGII+MAATN PDILDPAL RPGRFD
Sbjct: 264 AVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFD 323
Query: 517 RHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAV 576
+ IVV PD+ GR++ILE++ ++KPLA+DV+++ IA+ TPGF GADL NLVN AA+ AA
Sbjct: 324 KKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAR 383
Query: 577 DGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKA 636
+G +K+T + E A DR++ G RK+ IS + K++ AYHE+GHA+V+ P+H+
Sbjct: 384 EGRDKITMKDFEEAIDRVIAGPARKSKLISPKEKRIIAYHEAGHAVVSTVVPNGEPVHRI 443
Query: 637 TIMPRG-SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDL 695
+I+PRG ALG LP D+ VS+ +LL +L +GGR AEE++FG +T+GA++D+
Sbjct: 444 SIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFG--DVTSGAANDI 501
Query: 696 HSATELAHYMVSNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLL 740
ATE+A MV GMS+ +GP+ S E+ S+ID EV K++
Sbjct: 502 ERATEIARNMVCQLGMSEELGPLAWGKEEQEVFLGKEITRLRNYSEEVASKIDEEVKKIV 561
Query: 741 REAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
Y+R K +++K+ KQL + LLE ET+ +E++RIL
Sbjct: 562 TNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRIL 601
>sp|Q6MLS7|FTSH1_BDEBA ATP-dependent zinc metalloprotease FtsH 1 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH1 PE=3 SV=1
Length = 645
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/470 (50%), Positives = 313/470 (66%), Gaps = 24/470 (5%)
Query: 331 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 390
+G G + S+ K + + KN TFK+V G D+AK++L E+V +LK+P K+T+LGG++
Sbjct: 137 AGGGKAMSFG-KSRARLLTEHKNRVTFKEVAGVDEAKEDLQEIVSFLKDPKKYTKLGGRI 195
Query: 391 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 450
PKG+LL G+PGTGKTLLA+A+AGEAGVPFF +GS+F EMFVGVGA RVR LF+ KK A
Sbjct: 196 PKGVLLVGSPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQGKKNA 255
Query: 451 PCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILD 506
PC+IFIDEIDAVG R G ++TL+QLLVEMDGFE +EG+I++AATN PD+LD
Sbjct: 256 PCLIFIDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGFESSEGVIMIAATNRPDVLD 315
Query: 507 PALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 566
PAL RPGRFDR ++V PD++GR++IL ++++ PL DVD IARGTPGF+GADL NL
Sbjct: 316 PALLRPGRFDRRVIVNKPDLKGREQILAVHMRKTPLGPDVDASKIARGTPGFSGADLENL 375
Query: 567 VNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFN 626
VN AA+ AA + L + E AKD++ MG ER++M IS+E KK+TAYHE+GH +V
Sbjct: 376 VNEAALVAARSDKKYLEMEDFEKAKDKVTMGAERRSMVISDEDKKVTAYHEAGHTLVGKK 435
Query: 627 TEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDH 686
G PIHK TI+PRG ALG+ LP + S+S+ + + GGR AEELIF
Sbjct: 436 LVGLDPIHKVTIIPRGMALGVTQTLPEKESVSLSKSKAENMIAFLFGGRAAEELIF--KD 493
Query: 687 ITTGASSDLHSATELAHYMVSNCGMSDAIGPV--HIKDRP--------------SSEMQS 730
ITTGA +D+ ATE+A MV GMS +GP+ +D P S
Sbjct: 494 ITTGAGNDIERATEIARRMVCEWGMS-KLGPLAYETRDNPVFMGMGYGNKSKEYSDAKAQ 552
Query: 731 RIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
ID EV K+++ YD +L+ H+ L L ALLEYET+ E+ ++
Sbjct: 553 EIDTEVEKIIKHGYDISIQILRDHQDALERLTQALLEYETIDGHEVDMLV 602
>sp|D0LWB8|FTSH_HALO1 ATP-dependent zinc metalloprotease FtsH OS=Haliangium ochraceum
(strain DSM 14365 / JCM 11303 / SMP-2) GN=ftsH PE=3 SV=1
Length = 682
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/468 (50%), Positives = 323/468 (69%), Gaps = 26/468 (5%)
Query: 331 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 390
+G G + S+ K + + +N TFKDV G ++AK E+ E++ +LK+P KFTRLGG++
Sbjct: 166 AGGGKAMSFG-KSKARLLTDHQNKVTFKDVAGVEEAKDEVEEIIAFLKDPKKFTRLGGRI 224
Query: 391 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 450
PKG+L+ G PGTGKTLLA+AIAGEAGVPFF +GS+F EMFVGVGA RVR LF+ KK A
Sbjct: 225 PKGVLMMGPPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNA 284
Query: 451 PCIIFIDEIDAVGSTRKQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILD 506
PCIIFIDEIDAVG R GH ++ TL+QLLVEMDGFE N+G+IL+AATN PD+LD
Sbjct: 285 PCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNDGVILIAATNRPDVLD 344
Query: 507 PALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 566
PAL RPGRFDR I+VP PD+RGR IL ++ + PL+ +V ++ IARGTPGF+GADL +L
Sbjct: 345 PALLRPGRFDRRIIVPRPDLRGRTGILGVHTRKVPLSTEVALEVIARGTPGFSGADLESL 404
Query: 567 VNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFN 626
VN AA+ AA +++ + E AKD+++MG ER++M IS++ K+ TAYHE+GHA+VA
Sbjct: 405 VNEAALIAARRDKDRVDMEDFEDAKDKVMMGAERRSMIISDKEKRTTAYHEAGHALVA-K 463
Query: 627 TEGAH--PIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGR 684
GA P+HK +I+PRG ALG+ LP+ D +++ L ++ + MGGR+AEEL+
Sbjct: 464 LVGAETDPVHKVSIIPRGRALGVTQLLPTEDRLGFTREFALNKIAILMGGRLAEELVL-- 521
Query: 685 DHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHI-----------KDRPSSEMQS--- 730
TTGA D+ AT+LA MV+ GMSD IGP++ +D P +E S
Sbjct: 522 KQKTTGAGDDIDKATDLARRMVTEWGMSDVIGPLNFASGGKQEVFLGRDLPQAEAYSQET 581
Query: 731 --RIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEI 776
RID E+ +++ + Y+R + +L+++ L +A LLEYETL +I
Sbjct: 582 AQRIDGEIRRIVTDQYERARRMLEENRDALERVARGLLEYETLDGNDI 629
>sp|Q1LLA9|FTSH_RALME ATP-dependent zinc metalloprotease FtsH OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=ftsH PE=3 SV=1
Length = 649
Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/467 (49%), Positives = 319/467 (68%), Gaps = 20/467 (4%)
Query: 331 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 390
G G + S+ K + + +N TF DV GCD++K+E+VE+V++LK+P KF +LGG++
Sbjct: 144 GGKGGAFSFG-KSRARLIDENQNAVTFADVAGCDESKEEVVELVDFLKDPQKFQKLGGRI 202
Query: 391 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 450
P+G+LL G PGTGKTLLA+AIAGEA VPFF +GS+F EMFVGVGA RVR +F+ AKK+A
Sbjct: 203 PRGVLLVGPPGTGKTLLARAIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKQA 262
Query: 451 PCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILD 506
PCI+FIDEIDAVG R G ++TL+Q+LVEMDGFE N G+I++AATN D+LD
Sbjct: 263 PCIVFIDEIDAVGRHRGAGMGGGNDEREQTLNQMLVEMDGFEANSGVIVIAATNRADVLD 322
Query: 507 PALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 566
AL RPGRFDR + V PD+RGR++IL+++++ P+ +DVD IARGTPGF+GADLANL
Sbjct: 323 KALLRPGRFDRQVYVGLPDIRGREQILKVHMRKVPIGNDVDASIIARGTPGFSGADLANL 382
Query: 567 VNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFN 626
VN AA+ AA + + E AKD+I MG ERK+ + EE +K TAYHESGHA+VA
Sbjct: 383 VNEAALFAARRSKRVVDMQDFEDAKDKIYMGPERKSTVMREEERKATAYHESGHAVVAKL 442
Query: 627 TEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDH 686
A P+HK TIMPRG ALG+ QLP D+ S + +L + + GGR AEE+ +
Sbjct: 443 LPKADPVHKVTIMPRGWALGVTWQLPEHDKYSKYKDNMLEEIAILFGGRAAEEVFL--NA 500
Query: 687 ITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRPSSEM-------------QSRID 733
++TGAS+D AT++A MV+ GMSD++G + D M Q ++D
Sbjct: 501 MSTGASNDFERATKIARDMVTRFGMSDSLGAMVYVDTEQDGMFGKLSSKTVSEATQQKVD 560
Query: 734 AEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
AE+ +++ + Y K LL+++ ++ A+ NAL+E+ET+ AE++ I+
Sbjct: 561 AEIRRIIDDQYALAKRLLEENRDKVEAMTNALMEWETIDAEQVNDIM 607
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/444 (51%), Positives = 313/444 (70%), Gaps = 21/444 (4%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TFKDV G ++AK+E+ E+VE+LK+P KF +LGG++PKG+L+ G PGTGKTLLAKAIAGEA
Sbjct: 151 TFKDVAGVEEAKEEVQELVEFLKDPKKFQKLGGRIPKGVLMVGPPGTGKTLLAKAIAGEA 210
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW--EGHT 473
VPFF +GS+F EMFVGVGA RVR +F+ A++ APCI+FIDEIDAVG R GH
Sbjct: 211 DVPFFSISGSDFVEMFVGVGASRVRDMFEQARRHAPCIVFIDEIDAVGRARGTGLGGGHD 270
Query: 474 KK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++ TL+ LLVEMDG E EG+I++AATN D+LDPAL RPGRFDR + V PD+RGR++
Sbjct: 271 EREQTLNALLVEMDGIESQEGVIVIAATNRKDVLDPALLRPGRFDREVRVNLPDIRGREQ 330
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL ++ Q L+ + D+ A+ARGTPGF+GA+LANL+N AA+ AA G + + +LE A+
Sbjct: 331 ILRVHAQKIKLSKNADLSALARGTPGFSGAELANLINEAALIAAKKGKDNVDQPDLEEAR 390
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
D++ G ER+++ +SEE +K TAYHE+GHA++ E PIHK TI+PRG ALG+ L
Sbjct: 391 DKVRWGKERRSLAMSEEERKTTAYHEAGHAVLNVLLENTDPIHKVTIIPRGPALGVTMML 450
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P+SD+ + +K++L L V MGGRVAEE+ G I++GAS D+ AT A MV GM
Sbjct: 451 PASDKYNARKKEVLDDLCVAMGGRVAEEVFLG--DISSGASGDIRQATWYARKMVCEWGM 508
Query: 712 SDAIGPVHIKD--------------RPSSEMQSR-IDAEVVKLLREAYDRVKALLKKHEK 756
S+ +G VH D R SE +R ID EV ++ AY++ K ++ +H+
Sbjct: 509 SEKLGMVHYADDSSMVFLGRELGTSRGYSEATARAIDHEVQHFIQAAYEKAKRIILEHKD 568
Query: 757 QLHALANALLEYETLSAEEIKRIL 780
++ ALA ALLEYETL+A+++ I+
Sbjct: 569 KVEALAQALLEYETLNADQVTEIV 592
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/479 (49%), Positives = 315/479 (65%), Gaps = 25/479 (5%)
Query: 332 GVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLP 391
G GS K K V +K FKDV G D+ KQELVEVVE+LK+P KF+ +G ++P
Sbjct: 140 GGGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIP 199
Query: 392 KGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAP 451
KG+LL G PGTGKTLLA+A+AGEAGVPFF +GS+F EMFVGVGA RVR LF+ AKK AP
Sbjct: 200 KGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 259
Query: 452 CIIFIDEIDAVGSTRKQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDP 507
CIIFIDEIDAVG R GH ++ TL+QLLVEMDGF NEGII++AATN DILDP
Sbjct: 260 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDP 319
Query: 508 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 567
AL RPGRFDR I V PDV GR+E+L+++ ++KPL DDV++K IA TPGF+GADL NL+
Sbjct: 320 ALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLL 379
Query: 568 NIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNT 627
N AA+ AA K++ +E A DR++ G +K+ IS + KK+ A+HE+GH +V
Sbjct: 380 NEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVVGVKL 439
Query: 628 EGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHI 687
E A +HK TI+PRG A G LP D ++Q +LL ++ +GGRVAEE+ FG +
Sbjct: 440 ENADMVHKVTIVPRGMAGGYAVMLPKEDRYFMTQPELLDKIIGLLGGRVAEEVTFG--EV 497
Query: 688 TTGASSDLHSATELAHYMVSNCGMSDAIGPVHI----------------KDRPSSEMQSR 731
+TGA +D AT +A MV+ GMS+ +GP+ + S +
Sbjct: 498 STGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAHE 557
Query: 732 IDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPE 790
ID EV ++++E Y R K +L +++ L +A LL+ ETL AE+IK ++ EG+LP+
Sbjct: 558 IDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLV---HEGKLPD 613
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/504 (47%), Positives = 329/504 (65%), Gaps = 32/504 (6%)
Query: 296 ELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVK 355
+++ ++ V + W + +Q+ G GG G S + + +K V
Sbjct: 110 QMLPSLFLIVIFIIFWYI---FMQQAQGG-GGSKVMSFGKSRARMITDKDKRV------- 158
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TF DV G D+ K+EL E+VE+LK P KF LG ++PKG+LL G PGTGKTLLAKA+AGEA
Sbjct: 159 TFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAVAGEA 218
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 471
GVPFF +GS+F EMFVGVGA RVR LF AKK APCI+FIDEIDAVG R G
Sbjct: 219 GVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHD 278
Query: 472 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++TL+QLLVEMDGF NEGII++AATN PDILDPAL RPGRFDRHI V PD++GR+E
Sbjct: 279 EREQTLNQLLVEMDGFSVNEGIIVIAATNRPDILDPALLRPGRFDRHITVGIPDIKGREE 338
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL+++ ++KPLA DV ++ +AR TPGF GADL NL+N AA+ AA G +++T ELE A
Sbjct: 339 ILKIHSRNKPLAPDVSLQVLARRTPGFTGADLENLMNEAALLAARRGLKQITMAELEEAI 398
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
R++ G E+++ +SE+ KKL AYHE+GHA+VA P+H+ TI+PRG A G L
Sbjct: 399 TRVIAGPEKRSRIMSEKDKKLVAYHEAGHAVVAKLLPNTPPVHEVTIIPRGRAGGYTMLL 458
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P D+ +S+ +++ + +GGRVAE L+ + I+TGA +D+ AT +A MV+ GM
Sbjct: 459 PEEDKYYMSKSEMMDEIVHLLGGRVAESLVL--NDISTGAQNDIERATNIARKMVTEYGM 516
Query: 712 SDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEK 756
S+ +GP+ + S E+ + ID E+ +++ EAY R ++LLK++
Sbjct: 517 SERLGPMTFGTKSEEVFLGRDLGRTRNYSEEVAAEIDREIKRIIEEAYKRAESLLKENID 576
Query: 757 QLHALANALLEYETLSAEEIKRIL 780
+LH +A AL+E E L+ EE +++
Sbjct: 577 KLHRVAKALIEKEKLNGEEFEKVF 600
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/469 (47%), Positives = 316/469 (67%), Gaps = 17/469 (3%)
Query: 328 IGTSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLG 387
+G G + S+ + + + NVK +V G D+ K+E+ EV+EYLK+P++F +LG
Sbjct: 134 MGNGGPTRAFSFGKSKAKVYIEEKPNVK-LDNVAGMDEVKEEVAEVIEYLKDPARFRKLG 192
Query: 388 GKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAK 447
G+ PKGIL G PG GKTLLAKA+AGEA VPF +GS+F EMFVGVGA R+R F+ A+
Sbjct: 193 GRPPKGILFYGEPGVGKTLLAKALAGEAHVPFISVSGSDFVEMFVGVGAARMRDTFETAR 252
Query: 448 KKAPCIIFIDEIDAVGSTRKQWE----GHTKKTLHQLLVEMDGFEQNEGIILMAATNLPD 503
K APCI+FIDEIDAVG +R ++TL+QLLVEMDGF+ +EGI+++AATN PD
Sbjct: 253 KNAPCIVFIDEIDAVGRSRGAINLGGNDEREQTLNQLLVEMDGFDTSEGILIIAATNRPD 312
Query: 504 ILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADL 563
ILDPAL RPGRFDR I +P PDV+GR EIL+++ ++KPLA DVD++ IAR TPGF GADL
Sbjct: 313 ILDPALLRPGRFDRQIFIPKPDVKGRYEILKVHAKNKPLAKDVDLELIARATPGFTGADL 372
Query: 564 ANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIV 623
N++N AA+ AA + + +LE A DR++MG ER+ M IS + K+ A HE+GHA++
Sbjct: 373 ENILNEAALLAARKRKDLIHMEDLEEAIDRVMMGLERRGMAISPKEKEKIAVHEAGHALM 432
Query: 624 AFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFG 683
A P+HK +I+PRG ALG+ TQLP D+ + LL+R+ + MGGR AEE+ +G
Sbjct: 433 GLMMPDADPLHKVSIIPRGMALGVTTQLPIDDKHIYDKADLLSRIHILMGGRCAEEVFYG 492
Query: 684 RDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIK------------DRPSSEMQSR 731
+D ITTGA +DL AT+LA+ +V+ GMS+ +GP+ ++ S ++
Sbjct: 493 KDGITTGAENDLQRATDLAYRIVATWGMSENVGPISVRRNINPFLGGSTVTEGSPDLLKE 552
Query: 732 IDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 780
ID EV KLL AY+ K ++ ++++ L ++ L+E ET+ +E IL
Sbjct: 553 IDKEVQKLLASAYEETKRVIAENKEALSSVVKRLIEKETIDCKEFVEIL 601
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/455 (50%), Positives = 318/455 (69%), Gaps = 24/455 (5%)
Query: 347 EVMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 405
++ EK + TF DV G D+AK EL E+V++LK+P KF RLGG++PKG+LL GAPGTGKT
Sbjct: 175 KIFAEKEITITFDDVAGIDEAKGELEEIVQFLKDPGKFQRLGGRIPKGVLLVGAPGTGKT 234
Query: 406 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 465
LLAKA+AGEAGVPFF +GSEF EMFVGVGA RVR LF AK APCIIFIDE+DA+G
Sbjct: 235 LLAKAVAGEAGVPFFSMSGSEFVEMFVGVGAARVRDLFGQAKDHAPCIIFIDELDALGKA 294
Query: 466 R--KQWEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 521
R GH ++ TL+QLLVEMDGF+ G+I+MAATN P+ILDPAL RPGRFDRH+ +
Sbjct: 295 RGLNPIGGHDEREQTLNQLLVEMDGFDPRSGVIIMAATNRPEILDPALLRPGRFDRHVAI 354
Query: 522 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 581
PD+RGR+ IL +++++ L +VD+K IA TPGF GADLANLVN AA+ AA ++
Sbjct: 355 DKPDIRGREAILRVHVKEVKLGSEVDLKKIAGMTPGFVGADLANLVNEAALVAARRDRDE 414
Query: 582 LTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR 641
+T + + A DRI+ G E+K ++ + K++ AYHE+GHA+VA P++K +I+PR
Sbjct: 415 VTMADFQEAADRIIGGLEKKNRAMNPKEKEIVAYHEAGHALVAMLLPNVDPVNKVSIIPR 474
Query: 642 G-SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATE 700
G +ALG QLP+ D +++ +LL RL V +GGRV+EE+IFG ++TGA +DL AT+
Sbjct: 475 GIAALGYTQQLPTEDRYLMTRNELLDRLQVLLGGRVSEEIIFG--DVSTGAQNDLQRATD 532
Query: 701 LAHYMVSNCGMSDAIGPV---------HI------KDRPSSEMQSR-IDAEVVKLLREAY 744
+A MV GMS+ +GP+ H+ ++R SEM ++ ID E+ +++ +A+
Sbjct: 533 IARSMVMEYGMSERLGPLTYTRDPRSAHLDLGLGSRERDYSEMIAQEIDEEITRIVEDAH 592
Query: 745 DRVKALLKKHEKQLHALANALLEYETLSAEEIKRI 779
++V+A LK+ L LA LLE E++ EE+K+
Sbjct: 593 EKVRATLKRERGCLEKLAKILLEKESIDGEELKQF 627
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/454 (50%), Positives = 310/454 (68%), Gaps = 21/454 (4%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F DV G ++ KQELVEVVE+LK+P +FT+LG ++P G+LL G PGTGKTLLAKA+AGEAG
Sbjct: 186 FSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAG 245
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----H 472
VPFF +GS+F EMFVGVGA RVRSLF+ AKK AP IIFIDEIDAVG R G
Sbjct: 246 VPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDE 305
Query: 473 TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 532
++TL+QLL+EMDGFE NEGII++AATN D+LDPAL RPGRFDR ++V PDV+GR+ I
Sbjct: 306 REQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAI 365
Query: 533 LELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 592
L+++ ++KPLA+DVD+K +A+ TPGF GADL N++N AA+ AA + A++++ A+D
Sbjct: 366 LKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAED 425
Query: 593 RILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLP 652
R++ G +K +S++ ++L AYHE+GH IV A +HK TI+PRG A G + LP
Sbjct: 426 RVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALP 485
Query: 653 SSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMS 712
D+ +S++ + +L MGGRVAEE+IF TTGAS+D AT++A MV+ GMS
Sbjct: 486 KEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMS 543
Query: 713 DAIGPVHIKDRP------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHA 760
+ +GPV + S + ID EV LL EA ++ +++ + +
Sbjct: 544 EKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKL 603
Query: 761 LANALLEYETLSAEEIKRILLPYREGQLPEQQEE 794
+A ALL+YETL + +IK + Y G++PE EE
Sbjct: 604 IAEALLKYETLDSTQIKAL---YETGKMPEAVEE 634
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/454 (50%), Positives = 310/454 (68%), Gaps = 21/454 (4%)
Query: 357 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 416
F DV G ++ KQELVEVVE+LK+P +FT+LG ++P G+LL G PGTGKTLLAKA+AGEAG
Sbjct: 186 FSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAG 245
Query: 417 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----H 472
VPFF +GS+F EMFVGVGA RVRSLF+ AKK AP IIFIDEIDAVG R G
Sbjct: 246 VPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDE 305
Query: 473 TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 532
++TL+QLL+EMDGFE NEGII++AATN D+LDPAL RPGRFDR ++V PDV+GR+ I
Sbjct: 306 REQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAI 365
Query: 533 LELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 592
L+++ ++KPLA+DVD+K +A+ TPGF GADL N++N AA+ AA + A++++ A+D
Sbjct: 366 LKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAED 425
Query: 593 RILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLP 652
R++ G +K +S++ ++L AYHE+GH IV A +HK TI+PRG A G + LP
Sbjct: 426 RVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALP 485
Query: 653 SSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMS 712
D+ +S++ + +L MGGRVAEE+IF TTGAS+D AT++A MV+ GMS
Sbjct: 486 KEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMS 543
Query: 713 DAIGPVHIKDRP------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHA 760
+ +GPV + S + ID EV LL EA ++ +++ + +
Sbjct: 544 EKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKL 603
Query: 761 LANALLEYETLSAEEIKRILLPYREGQLPEQQEE 794
+A ALL+YETL + +IK + Y G++PE EE
Sbjct: 604 IAEALLKYETLDSTQIKAL---YETGKMPEAVEE 634
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/480 (48%), Positives = 313/480 (65%), Gaps = 25/480 (5%)
Query: 332 GVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLP 391
G GS K K EK FKDV G D+ KQELVEVVE+LK+P KF LG ++P
Sbjct: 135 GGGSRVMNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIP 194
Query: 392 KGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAP 451
KG+LL G PGTGKTLLAKA AGEAGVPFF +GS+F EMFVGVGA RVR LF+ AKK AP
Sbjct: 195 KGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 254
Query: 452 CIIFIDEIDAVGSTRKQW--EGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDP 507
C+IFIDEIDAVG R GH ++ TL+QLLVEMDGF NEGII++AATN DILDP
Sbjct: 255 CLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDP 314
Query: 508 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 567
AL RPGRFDR I V PDV GR+ +L+++ ++KPL + V++K+IA TPGF+GADL NL+
Sbjct: 315 ALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLL 374
Query: 568 NIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNT 627
N AA+ AA +K+ A +++ A DR++ G +K+ IS++ + + AYHE GH ++
Sbjct: 375 NEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIGLVL 434
Query: 628 EGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHI 687
+ A +HK TI+PRG A G LP D ++ +LL ++ +GGRVAEE+IFG +
Sbjct: 435 DEADMVHKVTIVPRGQAGGYAVMLPREDRYFQTKPELLDKIVGLLGGRVAEEIIFG--EV 492
Query: 688 TTGASSDLHSATELAHYMVSNCGMSDAIGPVHI----------------KDRPSSEMQSR 731
+TGA +D AT +A MV+ GMS+ +GP+ + S ++
Sbjct: 493 STGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYE 552
Query: 732 IDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPEQ 791
ID E+ ++++E Y+R K +L ++ +L +A LL+ ETL AE+IK ++ G LPE+
Sbjct: 553 IDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLI---DHGTLPER 609
>sp|B1GZK7|FTSH_UNCTG ATP-dependent zinc metalloprotease FtsH OS=Uncultured termite group
1 bacterium phylotype Rs-D17 GN=ftsH PE=3 SV=1
Length = 631
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/445 (50%), Positives = 305/445 (68%), Gaps = 23/445 (5%)
Query: 356 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 415
TFKDV GCD+AK+EL E++E+LK+P++F +LGGK+PKG+LL G+PGTGKTLLAKA+AGEA
Sbjct: 154 TFKDVAGCDEAKEELQELIEFLKDPARFQKLGGKIPKGVLLFGSPGTGKTLLAKAVAGEA 213
Query: 416 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW--EGHT 473
VPFF +GSEF EMFVGVGA RVR LF +K APC++FIDEIDAVG R GH
Sbjct: 214 NVPFFSSSGSEFVEMFVGVGASRVRDLFDHGRKSAPCLLFIDEIDAVGRHRFAGIGGGHD 273
Query: 474 KK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 531
++ TL+QLLVEMDGF+ EG+IL+AATN PD+LDPAL RPGRFDR +++ +PD++ R+E
Sbjct: 274 EREQTLNQLLVEMDGFDSKEGVILIAATNRPDVLDPALLRPGRFDRQVIILSPDLKDREE 333
Query: 532 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 591
IL ++ + L +DV++ IAR TPGF GADLANLVN AA+ AA + + +E A
Sbjct: 334 ILGVHSKKIRLDNDVNLNVIARRTPGFVGADLANLVNEAALLAARNSQNAVNMKNMEEAI 393
Query: 592 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 651
DRIL G +RK+ +S++ K + AYHE+GH +VA A P+HK +I+PRG ALG QL
Sbjct: 394 DRILAGPQRKSRLMSDKEKNIIAYHEAGHTLVAKFLPSADPVHKVSIIPRGPALGYTLQL 453
Query: 652 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 711
P D+ S+ +LL +L + GGRVAEEL+F ITTGA +D+ AT +A MV+ GM
Sbjct: 454 PEEDKYLTSKSELLDKLSILFGGRVAEELVF--SEITTGAQNDISKATGIAMRMVTEFGM 511
Query: 712 SDAIGPVHIKDRPSSEM----------------QSRIDAEVVKLLREAYDRVKALLKKHE 755
SD IGP+ ++ RP+ E+ ID EV ++ + R ++K +
Sbjct: 512 SDKIGPMALQ-RPNEEVFLGRDISRDARHSGKTSELIDEEVKNIIYSSKSRASKIIKDNV 570
Query: 756 KQLHALANALLEYETLSAEEIKRIL 780
L+ + + LLE E LS E+I +I+
Sbjct: 571 SILNKIVSYLLERENLSGEDIDKII 595
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 297,857,359
Number of Sequences: 539616
Number of extensions: 13180705
Number of successful extensions: 63097
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 1129
Number of HSP's that attempted gapping in prelim test: 59821
Number of HSP's gapped (non-prelim): 2837
length of query: 802
length of database: 191,569,459
effective HSP length: 126
effective length of query: 676
effective length of database: 123,577,843
effective search space: 83538621868
effective search space used: 83538621868
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)