Query 003697
Match_columns 802
No_of_seqs 142 out of 726
Neff 4.4
Searched_HMMs 29240
Date Tue Mar 26 18:25:50 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003697.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1746-1749//hhsearch_pdb/003697hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4av3_A K(+)-stimulated pyropho 1.0 1 1 2002.4 45.9 687 64-801 9-729 (735)
2 4a01_A Proton pyrophosphatase; 1.0 1 1 1971.6 50.5 694 65-802 9-756 (766)
3 3mp7_A Preprotein translocase 1.0 1 1 19.6 4.6 128 618-764 351-481 (482)
4 2keb_A DNA polymerase subunit 1.0 1 1 18.2 -1.5 50 622-680 11-60 (101)
5 2g04_A Probable fatty-acid-COA 1.0 1 1 17.4 0.9 18 275-295 29-46 (359)
6 1qd1_A Formiminotransferase-cy 1.0 1 1 16.8 -0.4 11 384-394 135-145 (325)
7 2ca5_A MXIH; transport protein 1.0 1 1 14.9 -0.8 10 292-301 39-48 (85)
8 3bld_A Queuine tRNA-ribosyltra 1.0 1 1 14.6 -0.5 42 279-328 241-288 (386)
9 3din_C Preprotein translocase 1.0 1 1 14.3 4.6 85 609-697 297-381 (431)
10 3fss_A Histone chaperone RTT10 1.0 1 1 14.3 3.4 32 646-679 99-130 (237)
No 1
>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A
Probab=1.00 E-value=1 Score=2002.42 Aligned_cols=687 Identities=40% Similarity=0.661 Sum_probs=635.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 30279999999999999999999998349999577999999999979999999882799999999999999975216897
Q 003697 64 TSPIIVFVFSVCIITFILSIYLCKWVLSKDEGPPEMAQISDAIRDGAEGFFRTQYGTISKMACLLALVIFCIYLFRNTTP 143 (802)
Q Consensus 64 ~~~~~~~~~~~~~~~l~~a~~~~~~v~~~~~G~~~m~~Is~~I~eGA~afl~~qy~~i~~~~~~~~~~i~~~~~~~~~~~ 143 (802)
..++..+.+++|+++++|++++++||+|||+|++|||||+++|||||++||+||||++++|.++++++++++
T Consensus 9 ~~~v~~l~~~~~i~~l~~a~~~~~~v~~~~~G~~~M~eIa~~I~eGA~afL~rqyk~i~~~~vv~~~ll~~~-------- 80 (735)
T 4av3_A 9 HHYVAALFFLIPLVALGFAAANFAAVVRKPEGTERMKEISSYIRSGADSFLAHETKAIFKVAIVIAILLMIF-------- 80 (735)
T ss_dssp --CHHHHHHTHHHHHHHHHHHHHHHHHTSCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
T ss_conf 799999999999999999999999998389998899999999999999999999999999999999999999--------
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 434345677762135789999978989875567764555344554999965--489999994401314689999999999
Q 003697 144 QQEASGIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARR--SAREALQIAVRAGGFSAIVVVGMAVIG 221 (802)
Q Consensus 144 ~~~~~g~~~~~~~~~tai~FliGa~~S~laGyiGM~vat~ANvRta~aA~~--g~~~al~vafr~GsvmGl~vvgl~llg 221 (802)
.+|+++++|++|++||+++||+|||+|||||+||++|||+ +++++|++|||+|+||||+|+||+|+|
T Consensus 81 -----------~~~~~ai~Fl~Ga~~S~~aGyiGM~vAt~ANvRTA~AA~~s~~l~~aL~vAFrgGaVmGl~vvgl~Llg 149 (735)
T 4av3_A 81 -----------TTWQTGVAFLLGAVMSASAGIVGMKMATRANVRVAEAARTTKKIGPALKVAYQGGSVMGLSVGGFALLG 149 (735)
T ss_dssp -----------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf -----------604899999999999999999999999999999999976168950888723212408999999999999
Q ss_pred HHHHHHHHHHHHCCC----CC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCCCCC
Q ss_conf 999999999872378----99---99854640134655013799999999751200112342214210011058999898
Q 003697 222 IAILYATFYVWLGVD----TP---GSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDP 294 (802)
Q Consensus 222 l~il~~~~~~~~~~~----~~---~~~~~~~~~~~i~gfgfGaS~vALFaRvGGGIyTKAADVGADLVGKVE~gIPEDDP 294 (802)
++++|+++..++... .+ ...+..+.++++.||+||||++|||+||||||||||||||||||||||+|||||||
T Consensus 150 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iALFaRvGGGIyTKaADVGADLVGKVEagIPEDDP 229 (735)
T 4av3_A 150 LVLVYLIFGKWMGQVDNLNIYTNWLGINFVPFAMTVSGYALGCSIIAMFDRVGGGVYTKAADMAADLVGKTELNLPEDDP 229 (735)
T ss_dssp HHHHHHHTTTTTCHHHHCSCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC----------
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCCCCCC
T ss_conf 99999999875066420011000011220134677741111388999999973750322213440443015418999999
Q ss_pred CCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC--CCC----------CCCCHHHHHHHHHHHHHH
Q ss_conf 89101201228885553224641377779999999999876532025--689----------843137889999979999
Q 003697 295 RNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMVQRCK--LEN----------PSGFILFPLVVHSFDLVI 362 (802)
Q Consensus 295 RNPavIADnVGDNVGD~AGmgADLFESy~~siiaamilg~~~~~~~~--~~~----------~~~~i~~Pl~i~a~gii~ 362 (802)
||||||||||||||||||||||||||||+++++++|+|++.++.... ... ....+.||++++++|+++
T Consensus 230 RNPAvIADNVGDNVGDvAGMgADLFESY~~sivAamvL~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~Pl~i~~~gii~ 309 (735)
T 4av3_A 230 RNPATIADNVGDNVGDVAGLGADLLESFVGAIVSSIILASYMFPIYVQKIGENLVHQVPKETIQALISYPIFFALVGLGC 309 (735)
T ss_dssp -CCTTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEEEETTEEEESSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99724666406653221134432388889999999999998852125543224543032367789999999999999999
Q ss_pred HHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC------CCCCHHHHHHHHHHHHHHHH
Q ss_conf 987754120368888889999958988789999999999999999998630489------87511588999999999999
Q 003697 363 SSIGILSIRSSRDSSVKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQ------APSAWLNFALCGLVGIITAY 436 (802)
Q Consensus 363 Siig~~~v~~~~~~~~~~~~~~~~~aL~~g~~vs~il~~v~~~~~~~~~l~~~~------~~~~~~~~f~~~~~Gl~~g~ 436 (802)
|++|+|++|.+++ .++++++++++++++.+++++.+++++++++++.. ....|+++|+|+++|+++|.
T Consensus 310 SiiG~~~v~~~~~------~~~~~~~l~~~~~~s~~~s~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~iGlv~g~ 383 (735)
T 4av3_A 310 SMLGILYVIVKKP------SDNPQRELNISLWTSALLTVVLTAFLTYFYLKDLQGLDVLGFRFGAISPWFSAIIGIFSGI 383 (735)
T ss_dssp HHHHHHHHHHSCC------CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHTCTTGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHEEEECCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9876531451355------5325678766677638999999999999996102201123555640689999999999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
Q ss_conf 99876632157887304888752187832588987753210214689999999999998620488877889987415899
Q 003697 437 IFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSAYWLGQTSGLVDESGNPIGGLFGT 516 (802)
Q Consensus 437 lI~~~TeYyTs~~~~PVr~IA~as~tG~atnII~Gla~Gm~St~~Pvl~Ia~ai~~sy~l~~~~g~~~~~~~~~~GlfGi 516 (802)
+|+++||||||++|||||+||++|+||||||||+|+++||+||+||+++|+++|+.||+++ |+||+
T Consensus 384 lI~~iTEYYTs~~~~PVr~IA~aS~TG~ATnII~GLavGm~St~~pvl~I~~~I~~s~~~a--------------GlyGi 449 (735)
T 4av3_A 384 LIGFWAEYYTSYRYKPTQFLGKSSIEGTGMVISNGLSLGMKSVFPPTLTLVLGILFADYFA--------------GLYGV 449 (735)
T ss_dssp HHHHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH--------------HHHHH
T ss_pred HHHHHEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHH
T ss_conf 9887123425899766799987479767789999999888989999999999999999999--------------99999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999875444576431123344447761101379972577551110004883100210356899999999999998989
Q 003697 517 AVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDE 596 (802)
Q Consensus 517 AiAa~GMLst~~i~la~DayGPIaDNAgGIaEMs~l~~evR~~tD~LDa~GNTTkAi~KGfAIGSAaLaal~LF~ay~~~ 596 (802)
|+|++|||||+++++++|+||||+||||||||||++||||||+||+||++||||||+|||||||||+|+||+||++|+++
T Consensus 450 aiAa~GMLst~gi~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDavGNTTkAi~KGfAIGSAaL~AlaLfaay~~~ 529 (735)
T 4av3_A 450 AIAALGMLSFVATSVSVDSYGPIADNAGGISEMCELDPEVRKITDHLDAVGNTTAAIGKGFAIGSAIFAALSLFASYMFS 529 (735)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998732324766236676477510487726973888851035555631111244114757999999999999998
Q ss_pred HHHHCC-----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 642107-----997400258901788989778799999999798884239899999998200276845656678724599
Q 003697 597 VATFAQ-----EPFKQVDIAIPEVFVGGLLGSMLIFLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCV 671 (802)
Q Consensus 597 ~~~~~~-----~~~~~~~l~~P~VlvGlliG~mlpflFSa~~m~aVg~aA~~mV~EVRRQFre~pGimeg~~kPDY~rcV 671 (802)
...... .....+|+.||+|++|+|+|+|+|||||+++|+||||+|++|||||||||||+|||||||+||||+|||
T Consensus 530 ~~~~~~~~~~~~~~~~~~l~~P~VlvGlliGgmlpflFsaltm~AVgrAA~~mV~EVRRQFreipGimeg~~kPdy~~cV 609 (735)
T 4av3_A 530 QISPSDIGKPPSLVLLLNMLDARVIAGALLGAAITYYFSGYLISAVTKAAMKMVDEIRRQAREIPGLLEGKAKPDYNRCI 609 (735)
T ss_dssp TCCGGGSSSCGGGTSCCBTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------------------CHHHH
T ss_pred HHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf 86332101354432026426634279989988899999999999999999999999998776287711388899758999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 89659999763212468877647667756552001122203589998998789998999999850256111123456640
Q 003697 672 AIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHALLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKFIET 751 (802)
Q Consensus 672 ~I~T~~AlkeMi~Pgllavl~Pi~vG~~~~~~~~~~~~~llG~~al~G~L~g~~vsGi~~Ai~m~NaGGAWDNAKKyIE~ 751 (802)
|||||+|||||+.|++|++++|+++|++ +|+++++|||+|++++|++||+||+|+||||||||||||+
T Consensus 610 ~I~T~~AlkeMi~p~~l~v~~P~~vg~~------------~g~~~l~g~L~g~~v~G~~~Ai~m~n~GGAWDNAKK~iE~ 677 (735)
T 4av3_A 610 EITSDNALKQMGYPAFIAILTPLVTGFL------------LGAEFVGGVLIGTVLSGAMLAILTANSGGAWDNAKKYLEA 677 (735)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHH------------HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
T ss_conf 9999999997589999999999999998------------5799999999999999999999985676277625774146
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 5899--9997000163035655788888877405799999999999871036
Q 003697 752 GALG--GKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIF 801 (802)
Q Consensus 752 G~~g--GKgS~aHkAaVvGDTVGDPfKDTaGPSlnilIKl~s~vslv~ap~~ 801 (802)
|++| |||||+|||+|||||||||||||||||||||||+|+++|||++|+|
T Consensus 678 G~~g~~gKgS~aHkAaVvGDTVGDPfKDTsGPslN~lIKl~~~vslv~ap~~ 729 (735)
T 4av3_A 678 GNLEGYGKGSEPHKALVIGDTVGDPLKDTVGPSLDILIKIMSVVSVIAVSIF 729 (735)
T ss_dssp SCSSSCCSSSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8777789998232372158789987413663058899999999999999999
No 2
>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata}
Probab=1.00 E-value=1 Score=1971.64 Aligned_cols=694 Identities=41% Similarity=0.651 Sum_probs=635.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------------C-----------------CHHHHHHHHHHHHHHHHH
Q ss_conf 027999999999999999999999834999--------------9-----------------577999999999979999
Q 003697 65 SPIIVFVFSVCIITFILSIYLCKWVLSKDE--------------G-----------------PPEMAQISDAIRDGAEGF 113 (802)
Q Consensus 65 ~~~~~~~~~~~~~~l~~a~~~~~~v~~~~~--------------G-----------------~~~m~~Is~~I~eGA~af 113 (802)
....+++++++++|++||+++|.+|.|-+- | .++||||+++|||||++|
T Consensus 9 ~~~~~~i~~~~~~Gi~fa~~~~~~vs~v~~~~~~~~~~~~~~~~g~~~~l~~~~~g~~~~~~~~~m~eIa~aI~eGA~af 88 (766)
T 4a01_A 9 LGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSF 88 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCC-------------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 54554768977999999999997347677068755443455667753333001116652779999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998827999999999999999752--1689743434------5677762135789999978989875567764555344
Q 003697 114 FRTQYGTISKMACLLALVIFCIYLF--RNTTPQQEAS------GIGRSNSACITVAAFLLGALCSGIAGYVGMWVSVRAN 185 (802)
Q Consensus 114 l~~qy~~i~~~~~~~~~~i~~~~~~--~~~~~~~~~~------g~~~~~~~~~tai~FliGa~~S~laGyiGM~vat~AN 185 (802)
|+||||++++|.++++++|++.+.. +..+++|++. +...+..+++++++|++|++||.++||+|||+|||||
T Consensus 89 L~rqYk~i~~~~vv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Fl~Ga~~S~~aG~iGM~vat~AN 168 (766)
T 4a01_A 89 LFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYAN 168 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCCCEEETTEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998410123444332222332223211000258899999999999998887889987879
Q ss_pred HHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 55499996548999999440131468999999999999999999987237899998546401346550137999999997
Q 003697 186 VRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQ 265 (802)
Q Consensus 186 vRta~aA~~g~~~al~vafr~GsvmGl~vvgl~llgl~il~~~~~~~~~~~~~~~~~~~~~~~~i~gfgfGaS~vALFaR 265 (802)
+||+++||+|++++|++|||+|+||||+|+||+|++++++|+++..++..+ ..+.++++.||+||+|++|||+|
T Consensus 169 vRtA~AA~~gl~~al~vAfr~GaVmGl~vvglgLlgl~~~~~~~~~~~~~~------~~~~~~~l~Gfg~GaS~iAlFaR 242 (766)
T 4a01_A 169 ARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDD------WGGLFEAITGYGLGGSSMALFGR 242 (766)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------HHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC------HHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 999999984558999999725626899999999999999999997404740------34355788621205999999999
Q ss_pred HHCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHCCCCC
Q ss_conf 51200112342214210011058999898891012012288855532246413777799999999998765-32025689
Q 003697 266 LGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTM-VQRCKLEN 344 (802)
Q Consensus 266 vGGGIyTKAADVGADLVGKVE~gIPEDDPRNPavIADnVGDNVGD~AGmgADLFESy~~siiaamilg~~~-~~~~~~~~ 344 (802)
+||||||||||||||||||||+|||||||||||||||||||||||||||+|||||||+++++++|+|+... +.. +.
T Consensus 243 vGGGIyTKAADVGADLVGKVEagIPEDDPRNPAvIADnVGDNVGD~AGmgADLFESy~~t~iaamvlg~~~~~~~---~~ 319 (766)
T 4a01_A 243 VGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGL---NH 319 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCCTTCTTCTTHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTSHHHH---TT
T ss_pred HCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC---CC
T ss_conf 635063214650454325203689876888830344543333111023320289988999999999988864122---22
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------
Q ss_conf 843137889999979999987754120368888889999958988789999999999999999998630489--------
Q 003697 345 PSGFILFPLVVHSFDLVISSIGILSIRSSRDSSVKAPIEDPMAILQKGYSVTVVLAVLTFGASTRWLLYTEQ-------- 416 (802)
Q Consensus 345 ~~~~i~~Pl~i~a~gii~Siig~~~v~~~~~~~~~~~~~~~~~aL~~g~~vs~il~~v~~~~~~~~~l~~~~-------- 416 (802)
....++|||+++++||++|++|++++|...+. .+.+||+++|++|+|+|+++++++++++++|++|+..
T Consensus 320 ~~~~v~~PL~i~a~gii~siig~~~v~~~~~~---~~~~~~~~aL~~g~~~s~il~~v~~~~~~~~~l~~~~~~~~~~~~ 396 (766)
T 4a01_A 320 ELTAMLYPLIVSSVGILVCLLTTLFATDFFEI---KAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQ 396 (766)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHTTCCC---CSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSEEEEEETTEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 05899999999999999998776236741047---888887999999999999999999999999981331001233433
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 87511588999999999999998766321578873048887521878325889877532102146899999999999986
Q 003697 417 APSAWLNFALCGLVGIITAYIFVWITKYYTDYKHEPVRALALSSSTGHGTNIIAGVSLGLESTAPPVLVISVSIVSAYWL 496 (802)
Q Consensus 417 ~~~~~~~~f~~~~~Gl~~g~lI~~~TeYyTs~~~~PVr~IA~as~tG~atnII~Gla~Gm~St~~Pvl~Ia~ai~~sy~l 496 (802)
....||++|+|+++|+++|.+|+++||||||++|+|||+||++|+||||||||+||++||+||++|+++|+++++.||++
T Consensus 397 ~~~~~~~~f~~~~~Gl~~g~lI~~iTeYyTs~~~~PV~~IA~aS~TG~ATnII~GlavGm~St~~Pvl~i~~ai~~sy~l 476 (766)
T 4a01_A 397 KDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTF 476 (766)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44305999999999999999999988553489986179999880768405476556778788999999999999999998
Q ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 20488877889987415899999998754445764311233444477611013799725775511100048831002103
Q 003697 497 GQTSGLVDESGNPIGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKG 576 (802)
Q Consensus 497 ~~~~g~~~~~~~~~~GlfGiAiAa~GMLst~~i~la~DayGPIaDNAgGIaEMs~l~~evR~~tD~LDa~GNTTkAi~KG 576 (802)
+ |+||+|+|++|||||+++++++|+||||+||||||||||++||||||+||+|||+||||||+|||
T Consensus 477 ~--------------glyGiAlAa~GMLst~g~~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDavGNTTaAi~KG 542 (766)
T 4a01_A 477 A--------------AMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKG 542 (766)
T ss_dssp H--------------HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H--------------HHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCC
T ss_conf 7--------------79999999999986513403431467854575247988159688999988654214732554044
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 56899999999999998989642107997400258901788989778799999999798884239899999998200276
Q 003697 577 FAIGSAALASFLLFSAYMDEVATFAQEPFKQVDIAIPEVFVGGLLGSMLIFLFSGWACSAVGKTAQEVVNEVRRQFIERP 656 (802)
Q Consensus 577 fAIGSAaLaal~LF~ay~~~~~~~~~~~~~~~~l~~P~VlvGlliG~mlpflFSa~~m~aVg~aA~~mV~EVRRQFre~p 656 (802)
||||||+|++|+||++|+++++ +..+|+.||+|++|+|+|+|+|||||+++|+||||+|++|||||||||||+|
T Consensus 543 fAIGSAaL~AlaLf~ay~~~~~------~~~~~l~~P~Vl~GlliG~mlpflFsa~tm~AVg~AA~~mV~EVRRQFreip 616 (766)
T 4a01_A 543 FAIGSAALVSLALFGAFVSRAS------ITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIP 616 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT------CSCCBSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHHC------CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 0246789999999999998733------5636468841799999988899999999999999999999999998874288
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 84565667872459989659999763212468877647667756552001122203589998998789998999999850
Q 003697 657 GIMEYKEKPDYARCVAIVASASLREMIKPGALAIISPLVIGLLFRILGYYTGHALLGAKVVAALLMFATVSGILMALFLN 736 (802)
Q Consensus 657 Gimeg~~kPDY~rcV~I~T~~AlkeMi~Pgllavl~Pi~vG~~~~~~~~~~~~~llG~~al~G~L~g~~vsGi~~Ai~m~ 736 (802)
|||||++||||+|||||||++|||||+.|+++++++|+++|++ +|+++++|+|+|++++|++||+||+
T Consensus 617 GImeg~~kPDY~rcV~I~T~aAlkeMi~Pgllav~~Pi~vG~~------------lG~~al~G~L~G~~vsGv~~Ai~ma 684 (766)
T 4a01_A 617 GLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGIL------------FGVETLSGVLAGSLVSGVQIAISAS 684 (766)
T ss_dssp TTTTTSSCCCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH------------TCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7446999997699999999999998888899999999999998------------2399999999999999999999974
Q ss_pred CCCCHHHHHHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 2561111234566405------89999970001630356557888888774057999999999998710369
Q 003697 737 TAGGAWDNAKKFIETG------ALGGKGSDTHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLVMAPIFL 802 (802)
Q Consensus 737 NaGGAWDNAKKyIE~G------~~gGKgS~aHkAaVvGDTVGDPfKDTaGPSlnilIKl~s~vslv~ap~~~ 802 (802)
|+||||||||||||+| +|||||||+|||+|||||||||||||||||||||||+|+++||||+|+|.
T Consensus 685 NaGGAWDNAKKyIE~G~~~~~~~~ggKGSeaHkAaVvGDTVGDPfKDTsGPslNiLIKlm~ivsLv~ap~~~ 756 (766)
T 4a01_A 685 NTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFA 756 (766)
T ss_dssp HHHHHHHHHHHHHHHCCSHHHHTTCSTTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 444157768888870554320014899864540600488899973025651376999999999999999999
No 3
>3mp7_A Preprotein translocase subunit SECY; protein transport, membrane protein complex, preprotein TRAN membrane insertion,; 2.90A {Pyrococcus furiosus} SCOP: f.41.1.0
Probab=1.00 E-value=1 Score=19.61 Aligned_cols=128 Identities=15% Similarity=0.237 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98977879999999979888-42398999999982002768456566-78724599896599997632124688776476
Q 003697 618 GGLLGSMLIFLFSGWACSAV-GKTAQEVVNEVRRQFIERPGIMEYKE-KPDYARCVAIVASASLREMIKPGALAIISPLV 695 (802)
Q Consensus 618 GlliG~mlpflFSa~~m~aV-g~aA~~mV~EVRRQFre~pGimeg~~-kPDY~rcV~I~T~~AlkeMi~Pgllavl~Pi~ 695 (802)
..++=..+..+||-. ..++ +-...++=|..|||=--+||+..|++ .-||= -++.++.+.-.=+.-++++++ |.+
T Consensus 351 Y~~~~~~lii~Fs~f-y~~is~~np~diA~nlkk~G~~IpGiRpG~~tt~~yL--~~vi~rit~~Ga~~L~~iavl-p~~ 426 (482)
T 3mp7_A 351 YLILTVIFSLLFGYL-WVELTGLDARSIARQLQRAGLQIPGFRRDPRTLEKVL--QRYIPYVTFWGSLTVALIAVL-ADF 426 (482)
T ss_dssp HHHHHHHHHHHHHHH-HHHHSSTTGGGCCC--------CCTTTTTTSTTCC--------CTHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-HHH
T ss_conf 999999999999999-9998558999999999986983677489942699999--999999999729999999998-999
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 67756552001122203589998998789998-9999998502561111234566405899999700016
Q 003697 696 IGLLFRILGYYTGHALLGAKVVAALLMFATVS-GILMALFLNTAGGAWDNAKKFIETGALGGKGSDTHKA 764 (802)
Q Consensus 696 vG~~~~~~~~~~~~~llG~~al~G~L~g~~vs-Gi~~Ai~m~NaGGAWDNAKKyIE~G~~gGKgS~aHkA 764 (802)
.|.. | .=.|+|+...+. ..+.-+----.=--.+.-||.+.+|.+-.+||..|+.
T Consensus 427 l~~~-------------g--gGTslLI~VgV~~~~~~qi~s~~~~~~Y~~l~~~~g~~~~~~~~~~~~~~ 481 (482)
T 3mp7_A 427 LGAL-------------G--TGTGILLTVGILYRFYEEIAREQITEMFPALRKLFGAGTLVPRGSHHHHH 481 (482)
T ss_dssp HTCS-------------S--CSHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSCC-----------
T ss_pred HHCC-------------C--CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 7206-------------8--72034100998999999999999997658999984577305687655568
No 4
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=18.18 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 78799999999798884239899999998200276845656678724599896599997
Q 003697 622 GSMLIFLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLR 680 (802)
Q Consensus 622 G~mlpflFSa~~m~aVg~aA~~mV~EVRRQFre~pGimeg~~kPDY~rcV~I~T~~Alk 680 (802)
|..+-.+|-+--|.+|. .+++++||.|- ||--. ..=.+||+++|..+.+.
T Consensus 11 ~~~~~~~~~~~~~~~Vs------ae~L~eEfdef-Gi~~~--d~VldKc~ELC~~y~ld 60 (101)
T 2keb_A 11 GSSLEVLFQGPGSMSAS------AQQLAEELQIF-GLDCE--EALIEKLVELCVQYGQN 60 (101)
T ss_dssp -------------CCCC------HHHHHHHHHHH-TCBCC--HHHHHHHHHHHHHHTCC
T ss_pred CCCCHHEEECCCHHHCC------HHHHHHHHHHC-CCCCC--HHHHHHHHHHHHHCCCC
T ss_conf 76300001178510225------99999999982-98777--89999999999985998
No 5
>2g04_A Probable fatty-acid-COA racemase FAR; isomerase; 2.70A {Mycobacterium tuberculosis}
Probab=1.00 E-value=1 Score=17.43 Aligned_cols=18 Identities=44% Similarity=0.687 Sum_probs=15.1
Q ss_pred HHHCCCCCHHHHCCCCCCCCC
Q ss_conf 422142100110589998988
Q 003697 275 ADVGADLVGKVEQGIPEDDPR 295 (802)
Q Consensus 275 ADVGADLVGKVE~gIPEDDPR 295 (802)
||.|||-+ |||. |.||+|
T Consensus 29 AdlGAeVI-KVE~--pgd~~~ 46 (359)
T 2g04_A 29 ADLGADVV-RVRR--PGGLTM 46 (359)
T ss_dssp HHTTCEEE-EEEC--TTCCCS
T ss_pred HHCCCCEE-EECC--CCCCCC
T ss_conf 98499199-9827--999865
No 6
>1qd1_A Formiminotransferase-cyclodeaminase; functional dimer, alpha-beta-BETA-alpha sandwich, electrosta charged substrate tunnel; HET: FON; 1.70A {Sus scrofa} SCOP: d.58.34.1 d.58.34.1
Probab=1.00 E-value=1 Score=16.83 Aligned_cols=11 Identities=18% Similarity=0.326 Sum_probs=5.6
Q ss_pred CHHHHHHHHHH
Q ss_conf 95898878999
Q 003697 384 DPMAILQKGYS 394 (802)
Q Consensus 384 ~~~~aL~~g~~ 394 (802)
..+..+|||+|
T Consensus 135 r~L~~iRrG~y 145 (325)
T 1qd1_A 135 QSLPALRAGEY 145 (325)
T ss_dssp SCHHHHHTTHH
T ss_pred CCHHHHCCCCC
T ss_conf 86778504135
No 7
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=1.00 E-value=1 Score=14.91 Aligned_cols=10 Identities=40% Similarity=0.943 Sum_probs=3.6
Q ss_pred CCCCCCCHHC
Q ss_conf 8988910120
Q 003697 292 DDPRNPAVIA 301 (802)
Q Consensus 292 DDPRNPavIA 301 (802)
+||.||+..|
T Consensus 39 ~~PsnPa~LA 48 (85)
T 2ca5_A 39 KNPSNPQLLA 48 (85)
T ss_dssp HCTTCHHHHH
T ss_pred CCCCCHHHHH
T ss_conf 1999999999
No 8
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=1.00 E-value=1 Score=14.60 Aligned_cols=42 Identities=21% Similarity=0.428 Sum_probs=29.4
Q ss_pred CCCCHHHHCCCCCCCCC------CCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 42100110589998988------910120122888555322464137777999999
Q 003697 279 ADLVGKVEQGIPEDDPR------NPAVIADLVGDNVGDCAARGADLFESIAAEIIS 328 (802)
Q Consensus 279 ADLVGKVE~gIPEDDPR------NPavIADnVGDNVGD~AGmgADLFESy~~siia 328 (802)
.+++..+-..+|||-|| +|.-|.. +..+|.|+|.+..-+..|
T Consensus 241 ~~~l~~~~~~LP~~kPRylmGvg~P~~il~--------~V~~GvDmFDcv~ptr~A 288 (386)
T 3bld_A 241 FRVLDFSVPMLPDDKPHYLMGVGKPDDIVG--------AVERGIDMFDCVLPTRSG 288 (386)
T ss_dssp HHHHHHHGGGSCTTSCEEETTCCCHHHHHH--------HHTTTCCEEC--------
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCHHHHHH--------HHHCCCCEEECCHHHHHH
T ss_conf 999999985589887079838999999999--------998499889676788987
No 9
>3din_C Preprotein translocase subunit SECY; protein translocation, membrane protein, ATPase, ATP-binding membrane, nucleotide-binding, protein transport; HET: ADP; 4.50A {Thermotoga maritima MSB8}
Probab=1.00 E-value=1 Score=14.35 Aligned_cols=85 Identities=13% Similarity=0.210 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 25890178898977879999999979888423989999999820027684565667872459989659999763212468
Q 003697 609 DIAIPEVFVGGLLGSMLIFLFSGWACSAVGKTAQEVVNEVRRQFIERPGIMEYKEKPDYARCVAIVASASLREMIKPGAL 688 (802)
Q Consensus 609 ~l~~P~VlvGlliG~mlpflFSa~~m~aVg~aA~~mV~EVRRQFre~pGimeg~~kPDY~rcV~I~T~~AlkeMi~Pgll 688 (802)
+..+|.-..+.++=..+.++||-.-..-. -...|+=|+.|||=--+||+..| ||-.+-.-++.++.+.-.=+.-+++
T Consensus 297 ~~~~~~~~~y~~~y~~lii~Fs~fy~~i~-~np~diA~~lkk~G~~IpGiRpG--~~T~~yL~~vi~rit~~Ga~~L~~i 373 (431)
T 3din_C 297 NLFRAGGFLYLLIYGLLVFFFTYFYSVVI-FDPREISENIRKYGGYIPGLRPG--RSTEQYLHRVLNRVTFIGAVFLVVI 373 (431)
T ss_dssp CCSSTTHHHHHHHHHHHHHHHHHHHHTCT-THHHHHTTSCCCCBCSSCCCCCT--THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88087867999999999999999999980-59999999999879917797998--3689999999999999839999999
Q ss_pred HHHHHHHHH
Q ss_conf 877647667
Q 003697 689 AIISPLVIG 697 (802)
Q Consensus 689 avl~Pi~vG 697 (802)
+++ |.+++
T Consensus 374 avl-p~~~~ 381 (431)
T 3din_C 374 ALL-PYLVQ 381 (431)
T ss_dssp HHH-HHHHT
T ss_pred HHH-HHHHH
T ss_conf 997-89999
No 10
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=1.00 E-value=1 Score=14.26 Aligned_cols=32 Identities=19% Similarity=0.536 Sum_probs=0.0
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999820027684565667872459989659999
Q 003697 646 NEVRRQFIERPGIMEYKEKPDYARCVAIVASASL 679 (802)
Q Consensus 646 ~EVRRQFre~pGimeg~~kPDY~rcV~I~T~~Al 679 (802)
+.+..||.+ .|+++...+ ||++|++-..+-+.
T Consensus 99 ~~~~kq~~~-~g~~~~~~~-~f~~~i~~~~rQ~~ 130 (237)
T 3fss_A 99 ENTLNQFKK-LGLLDSNVT-DFEKCVEYIRKQAI 130 (237)
T ss_dssp HHHHHHHHH-TTSSCTTCC-CTHHHHHHHHHHHH
T ss_pred HHHHHHHHH-CCCCCCCCH-HHHHHHHHHHHHHH
T ss_conf 886555543-577765404-68999999998775
Done!