Query 003698
Match_columns 802
No_of_seqs 317 out of 2193
Neff 6.9
Searched_HMMs 29240
Date Tue Mar 26 18:46:12 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003698.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1746-1749//hhsearch_pdb/003698hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ht6_A AMY1, alpha-amylase iso 1.0 1 1 578.0 35.7 391 411-802 2-405 (405)
2 4aef_A Neopullulanase (alpha-a 1.0 1 1 543.0 15.9 371 371-795 206-631 (645)
3 4aee_A Alpha amylase, catalyti 1.0 1 1 539.6 23.6 387 371-801 225-691 (696)
4 3edf_A FSPCMD, cyclomaltodextr 1.0 1 1 532.2 28.5 399 371-801 106-595 (601)
5 2wc7_A Alpha amylase, catalyti 1.0 1 1 524.7 22.3 374 368-778 8-436 (488)
6 1j0h_A Neopullulanase; beta-al 1.0 1 1 519.6 26.1 362 369-778 132-540 (588)
7 2z1k_A (NEO)pullulanase; hydro 1.0 1 1 518.3 23.5 370 370-778 5-425 (475)
8 1wzl_A Alpha-amylase II; pullu 1.0 1 1 517.5 26.1 362 370-778 129-537 (585)
9 1ea9_C Cyclomaltodextrinase; h 1.0 1 1 516.7 27.6 366 370-778 129-537 (583)
10 1gcy_A Glucan 1,4-alpha-maltot 1.0 1 1 512.4 32.5 374 409-801 15-418 (527)
No 1
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=1.00 E-value=1 Score=578.02 Aligned_cols=391 Identities=47% Similarity=0.956 Sum_probs=326.4
Q ss_pred EEEEEEEEECCCCC-CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHC
Q ss_conf 16885455137999-988999999887889649879994998789999999976688558-8999988999999998782
Q 003698 411 EILCQGFNWESHKS-GRWYMELKEKATELSSLGFSVIWLPPPTESVSPEGYMPRDLYNLS-SRYGNIDELKDVVNKFHDV 488 (802)
Q Consensus 411 ~~~~~~F~W~~~~~-GGdl~Gi~~kLdYLk~LGVt~I~L~PI~~~~s~hGY~~~Dy~~iD-p~lGt~edlk~LV~~aH~~ 488 (802)
++++|+|+|+++.+ ||||+||+++||||++||||+|||+||+++.++|||++.||++|| |+|||++||++||++||++
T Consensus 2 ~v~~~~F~~d~~~d~~G~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~ 81 (405)
T 1ht6_A 2 QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGK 81 (405)
T ss_dssp CCEEECCCTTGGGCTTCHHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 62898577477898786899999989999975998899398866889999785322547975678999999999999987
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 989999851275225688989987557997-----7777876668998888-9998888998899976568996899999
Q 003698 489 GMKILGDVVLNHRCAHYQNQNGVWNIFGGR-----LNWDDRAVVADDPHFQ-GRGNKSSGDNFHAAPNIDHSQDFVRKDI 562 (802)
Q Consensus 489 GIkVILD~V~NHtg~~~~~~~g~~~~f~g~-----~~w~~~~~~~~~~~f~-~~~~~~~~~~~~~lpdlN~~np~Vr~~i 562 (802)
||+||+|+|+|||+.+++...+.|+.|.+. .+|.......+...|. +.+.+..++++..+|+||++||+||++|
T Consensus 82 Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~p~v~~~i 161 (405)
T 1ht6_A 82 GVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQREL 161 (405)
T ss_dssp TCEEEEEECCSBCCCSEECTTSCEEECCCSSSSSTTCCCGGGBCTTCTTTCCSCSCCCSSCCCTTSCBBCTTCHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99899997967526888787887113789886888788776361788776789886668887676770276999999999
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCC-CCCCCCCCHHHHHHHHHHHHHCCCCC-
Q ss_conf 9999998752097657863324554203899999409967998301797655-46678870577899999986269984-
Q 003698 563 KEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLSYT-YGEMDHNQDAHRQRIIDWINAASGTA- 640 (802)
Q Consensus 563 ~~~l~~Wi~~~GIDGfRlD~a~~i~~~~~~~~~~~~~p~fliGE~w~~~~~l-~g~mny~~~~~~~~i~~~~~~~~g~~- 640 (802)
+++++||++++||||||||++++++.+|+++++++++|.|++||+|...++. .+.|+|....+++.+..|+...++..
T Consensus 162 ~~~~~~w~~~~gvDGfR~D~~~~~~~~f~~~~~~~~~p~~~igE~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~g~~~~ 241 (405)
T 1ht6_A 162 KEWLLWLKSDLGFDAWRLDFARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS 241 (405)
T ss_dssp HHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHCCSCEEECCCCCCCBCTTSSBCSCCHHHHHHHHHHHHHHTGGGS
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 99999997625998999835045889999999984189549998436886567543121110147899998753586433
Q ss_pred --CCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEE
Q ss_conf --344530257889953001153322101999998677887530312357878767677999059999999999389901
Q 003698 641 --GAFDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTP 718 (802)
Q Consensus 641 --~~fd~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~P~~~vnflenHDt~R~~~~~~~~~~~~~~A~allltlPGvP 718 (802)
++|||++...+..++. +..+.+.............+|.++++|++|||+.|+.+.+.++..+.++|++++||+||+|
T Consensus 242 ~~~vfdf~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~p~~~~~fl~nHD~~r~~~~~~~~~~~~~~a~a~llt~pG~P 320 (405)
T 1ht6_A 242 AGMVFDFTTKGILNAAVE-GELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAMWPFPSDKVMQGYAYILTHPGIP 320 (405)
T ss_dssp SEEEECHHHHHHHHHHTT-TCGGGGSCTTSSCSSHHHHCGGGEEEESCCTTTSTTTCSSCCCGGGHHHHHHHHHHSSSEE
T ss_pred CCEEECHHHHHHHHHHHH-HHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 220313166799999986-2588887653256104322805553046776776532344676779999999998389964
Q ss_pred EEECCCHHHH-HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCEEEEEEECCCCCCCCCCCCEEEEECCCCEE
Q ss_conf 6757861479-999999999999828445479822873079799999799799999679999999998829997399708
Q 003698 719 SVFYDHIFSH-YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWSFVTEGRDYK 797 (802)
Q Consensus 719 ~IYyGdE~~W-l~~~ikkLi~lRk~~~al~~G~~~~l~~~~~v~a~~r~~~~lvvinn~~~~~~~~~~~~~~~~~g~~y~ 797 (802)
+||||+|++| ++++|++|++|||++++|+.|.++.+..++++++|.|+++++|++|++........+.|++.++|..|+
T Consensus 321 ~iy~G~e~~W~~~~~~~~Li~lR~~~~al~~g~~~~~~~~~~v~af~R~~~~lv~~N~~~~~~~~~~~~~~~~~~~~~~~ 400 (405)
T 1ht6_A 321 CIFYDHFFNWGFKDQIAALVAIRKRNGITATSALKILMHEGDAYVAEIDGKVVVKIGSRYDVGAVIPAGFVTSAHGNDYA 400 (405)
T ss_dssp EEEHHHHHTSSCHHHHHHHHHHHHHTTCCTTCCEEEEEEETTEEEEEETTTEEEEESSCSCCGGGSCTTCEEEEEETTEE
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCCEE
T ss_conf 68717875844999999999999868532367458983689879999899199998688765665887307983489678
Q ss_pred EEECC
Q ss_conf 97629
Q 003698 798 VWEAA 802 (802)
Q Consensus 798 ~w~~~ 802 (802)
||++.
T Consensus 401 v~~~~ 405 (405)
T 1ht6_A 401 VWEKN 405 (405)
T ss_dssp EEEC-
T ss_pred EEECC
T ss_conf 87479
No 2
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=1.00 E-value=1 Score=542.97 Aligned_cols=371 Identities=20% Similarity=0.235 Sum_probs=271.6
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 35653002334458782110012469999989999877631688545513799998899999988788964987999499
Q 003698 371 AAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPP 450 (802)
Q Consensus 371 ~av~YqIf~Drf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~F~W~~~~~GGdl~Gi~~kLdYLk~LGVt~I~L~P 450 (802)
-||+||||||||++++..+.... ....| +||||+||++||||||+||||+|||||
T Consensus 206 ~aViYqI~p~~F~~~~~~~g~~~-------------------~~~~~------~gGdl~Gi~~kLdYLk~LGvt~I~L~P 260 (645)
T 4aef_A 206 DRVFYQIMPDKFARSRKIQGIAY-------------------PKDKY------WGGDLIGIKEKIDHLVNLGINAIYLTP 260 (645)
T ss_dssp GCCEEEECHHHHCCCSSCC----------------------------------CCCCHHHHHHTHHHHHHHTCCEEEECC
T ss_pred CCEEEEEECCHHCCCCCCCCCCC-------------------CCCCC------CCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 88799995204248999875367-------------------76767------886999999836999876998899798
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-----CCCCCCCCCCCCCCCC
Q ss_conf 87899999999766885588999988999999998782989999851275225688989-----9875579977777876
Q 003698 451 PTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQN-----GVWNIFGGRLNWDDRA 525 (802)
Q Consensus 451 I~~~~s~hGY~~~Dy~~iDp~lGt~edlk~LV~~aH~~GIkVILD~V~NHtg~~~~~~~-----g~~~~f~g~~~w~~~~ 525 (802)
||+++++|||++.||++|||+|||++||++||++||++|||||||+|+||||.+|+++. +..+.|...+.|...+
T Consensus 261 if~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~NHts~~h~wf~~~~~~~~~s~~~d~y~~~~~~ 340 (645)
T 4aef_A 261 IFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVFHHTSFFHPYFQDVVRKGENSSFKNFYRIIKFP 340 (645)
T ss_dssp CEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHHSTTCTTGGGBCBSSSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCEECCCC
T ss_conf 98798999958027775570029999999999986335888999951145666781055576528998755531724688
Q ss_pred CCCCCC---CCCCCC-------------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCH
Q ss_conf 668998---888999-------------8888998899976568996899999999999875209765786332455420
Q 003698 526 VVADDP---HFQGRG-------------NKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGG 589 (802)
Q Consensus 526 ~~~~~~---~f~~~~-------------~~~~~~~~~~lpdlN~~np~Vr~~i~~~l~~Wi~~~GIDGfRlD~a~~i~~~ 589 (802)
...... .+.+.. .+..+.....+||||++||+|+++|++++++|+ ++||||||+|++++++.+
T Consensus 341 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~V~~~~~~~~~~Wl-~~gvDGfR~D~a~~i~~~ 419 (645)
T 4aef_A 341 VVSKEFLQILHSKSSWEEKYKKIKSLGWNYESFFSVWIMPRLNHDNPKVREFIKNVILFWT-NKGVDGFRMDVAHGVPPE 419 (645)
T ss_dssp CSCTTHHHHHHHSCGGGTTHHHHHHHCCSBCEETTEEEEEBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCHH
T ss_conf 7654456556888654335565565563201234545676434369899999998877787-549877876331356256
Q ss_pred HHHHHHHHCCCC-EEEEEECCCCC-C----CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHH
Q ss_conf 389999940996-79983017976-5----54667887057789999998626998434453025788995300115332
Q 003698 590 YVKDYLEATEPY-FAVGEYWDSLS-Y----TYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRL 663 (802)
Q Consensus 590 ~~~~~~~~~~p~-fliGE~w~~~~-~----l~g~mny~~~~~~~~i~~~~~~~~g~~~~fd~~l~~~l~~~~~~~~~~~l 663 (802)
|++.+.++.++. +++||+|+... + ..+.|+|.. ...+..++..... ...+ +...+. .+
T Consensus 420 f~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~n~~~---~~~~~~~~~~~~~--~~~~------~~~~~~-----~~ 483 (645)
T 4aef_A 420 VWKEVREALPKEKYLIGEVMDDARLWLFDKFHGVMNYRL---YDAILRFFGYEEI--TAEE------FLNELE-----LL 483 (645)
T ss_dssp HHHHHHHHSCTTCEEEECCCSCCGGGTTTTCSEEBCHHH---HHHHHHHTTSCCS--CHHH------HHHHHH-----HH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEECCHHH---HHHHHHHHHCCCC--CHHH------HHHHHH-----HH
T ss_conf 789877543013443221135312220233330003467---7778876411543--0677------777888-----77
Q ss_pred HHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH----------------
Q ss_conf 2101999998677887530312357878767677999059999999999389901675786147----------------
Q 003698 664 SDEKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS---------------- 727 (802)
Q Consensus 664 ~~~~~~~~~~~~~~P~~~vnflenHDt~R~~~~~~~~~~~~~~A~allltlPGvP~IYyGdE~~---------------- 727 (802)
.... ...+..+++|++|||++|+.+..+ +..+.++|++++||+||+|+||||+|++
T Consensus 484 ~~~~-------~~~~~~~~~fl~nHD~~R~~s~~g-d~~~~~~a~a~llt~pG~P~iyyGdE~G~~~~~~~~~~~~R~pm 555 (645)
T 4aef_A 484 SSYY-------GPAEYLMYNFLDNHDVERFLDIVG-DKRKYVCALVFLMTYKGIPSLFYGDEIGLRGINLQGMESSRAPM 555 (645)
T ss_dssp HHHH-------GGGGGGCBCCSCCTTSCCHHHHHC-CHHHHHHHHHHHHHSSSBCEEETTGGGTCCCEEETTEEESCCCC
T ss_pred HHHC-------CCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCC
T ss_conf 6413-------531000133557788766343358-89999999999987489729987742087798978986565877
Q ss_pred -H--------HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE---CCEEEEEEECCCCCCCCCCCCEEEEECCCC
Q ss_conf -9--------9999999999998284454798228730797999997---997999996799999999988299973997
Q 003698 728 -H--------YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII---DEKVAMKLGPGHYEPPSGSQNWSFVTEGRD 795 (802)
Q Consensus 728 -W--------l~~~ikkLi~lRk~~~al~~G~~~~l~~~~~v~a~~r---~~~~lvvinn~~~~~~~~~~~~~~~~~g~~ 795 (802)
| ++++||+||+|||++|+|+.|+++.+..+++++||.| +++++|++|+++... ...++.+|.+.
T Consensus 556 ~W~~~~~~~~l~~~~r~Li~lRk~~paL~~G~~~~~~~~~~v~af~R~~~~~~~lVv~N~s~~~~----~~~~v~lP~~~ 631 (645)
T 4aef_A 556 LWNEEEWDQRILEITKTLVKIRKNNKALLFGNFVPVKFKRKFMVYKREHMGERTIVAINYSNSRV----KELGITIPEYS 631 (645)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHHTCHHHHHCEEEEEEEETTEEEEEEEETTEEEEEEEECSSSCE----EETTEEECTTE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCEEEEEEEECCCEEEEEEECCCCCC----EEEEEECCCCC
T ss_conf 89976452899999999999983098986596699985997999999909988999999999973----79998448987
No 3
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=1.00 E-value=1 Score=539.59 Aligned_cols=387 Identities=15% Similarity=0.185 Sum_probs=282.1
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 35653002334458782110012469999989999877631688545513799998899999988788964987999499
Q 003698 371 AAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPP 450 (802)
Q Consensus 371 ~av~YqIf~Drf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~F~W~~~~~GGdl~Gi~~kLdYLk~LGVt~I~L~P 450 (802)
.+|+||||||||++++++++.... ..+ +.+ ...+|. ||||+||+++|||||+||||+|||+|
T Consensus 225 ~~viYqI~p~rF~~~~~~n~~~~~------~~w-~~~-----~~~~~~------gGdl~Gi~~kLdyLk~LGvt~IwL~P 286 (696)
T 4aee_A 225 GTVYYQIFIDSFDNGDPNNDPPNR------IKK-TVP-----REYGYY------GGDLAGIMKHIDHLEDLGVETIYLTP 286 (696)
T ss_dssp SCCEEEECGGGTCCCCGGGCCSSC------CCC-CSS-----CCSSCC------CCCHHHHHTTHHHHHHHTCCEEEECC
T ss_pred CCEEEEEEHHHHCCCCCCCCCCCC------CCC-CCC-----CCCCCC------CCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 685999944785489877775555------555-677-----655667------74999999876899976999999897
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-----CCCCCCCCCCCCCCCC
Q ss_conf 87899999999766885588999988999999998782989999851275225688989-----9875579977777876
Q 003698 451 PTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQN-----GVWNIFGGRLNWDDRA 525 (802)
Q Consensus 451 I~~~~s~hGY~~~Dy~~iDp~lGt~edlk~LV~~aH~~GIkVILD~V~NHtg~~~~~~~-----g~~~~f~g~~~w~~~~ 525 (802)
||+++++|||++.||++|||+|||++||++||++||++|||||||+|+|||+.+|+++. +..++|.+++.|...+
T Consensus 287 i~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~NHts~~~~~f~~~~~~~~~s~y~dwy~~~~~~ 366 (696)
T 4aee_A 287 IFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVKALREGENSPYWEMFSFLSPP 366 (696)
T ss_dssp CEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSSEECTTSHHHHHHHHHCTTSTTGGGBCBCSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCCC
T ss_conf 42689889958122244374569999999999999977999999426543576678899987528889888825736888
Q ss_pred CC-----------CCCC---------CC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 66-----------8998---------88-899988889988999765689968999999999998752097657863324
Q 003698 526 VV-----------ADDP---------HF-QGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVR 584 (802)
Q Consensus 526 ~~-----------~~~~---------~f-~~~~~~~~~~~~~~lpdlN~~np~Vr~~i~~~l~~Wi~~~GIDGfRlD~a~ 584 (802)
.. .+.. .| ...+.+..+.++..+||||++||+||++|++++++|+ ++||||||||+++
T Consensus 367 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~y~~~~~~~~~pdLN~~np~Vr~~i~~~~~~Wl-~~GvDGfRlDaa~ 445 (696)
T 4aee_A 367 PKEIVELMLKYIDGEECRSRELYKLDYFRNNKPFYEAFFNIWLMAKFNHDNPRTVDYFIDITKFWI-DKGIDGFRIDVAM 445 (696)
T ss_dssp CHHHHHHHHHHHSSSSCCGGGGGGSHHHHHSCCSBCBGGGCTTCEEBCTTCHHHHHHHHHHHHHHH-TTTCCEEEETTGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHH-HCCCCEEEEECHH
T ss_conf 754222223346898644222333310158988555446878831115799999999999999998-6799789982321
Q ss_pred CCCCHHHHHHHHHC---CCC-EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCH--
Q ss_conf 55420389999940---996-799830179765546678870577899999986269984344530257889953001--
Q 003698 585 GFWGGYVKDYLEAT---EPY-FAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRC-- 658 (802)
Q Consensus 585 ~i~~~~~~~~~~~~---~p~-fliGE~w~~~~~l~g~mny~~~~~~~~i~~~~~~~~g~~~~fd~~l~~~l~~~~~~~-- 658 (802)
+++.+||+++.+.+ +|+ +++||+ +...|+.+. +++++++|.+...+...+..+
T Consensus 446 ~i~~~f~~~~~~~v~~~~p~~~~igE~-~~~~~l~~~--------------------~~d~~~n~~~~~~~~~~~~~~~~ 504 (696)
T 4aee_A 446 GIHYSWMKQYYEYIKNTYPDFLVLGEL-AENPRIYMD--------------------YFDSAMNYYLRKAILELLIYKRI 504 (696)
T ss_dssp GSCHHHHHHHHHHHHHHCTTCEEEECC-CSCGGGTTT--------------------TCSEEBCHHHHHHHHHHHTSCCS
T ss_pred HCCHHHHHHHHHHHHHHCCCCEEEECC-CCHHHHCCC--------------------CCCEEECCHHHHHHHHHHHCCCC
T ss_conf 089999999999998648981899454-623344078--------------------63358770788899999714898
Q ss_pred HHHHHHHHCCCCCCCCCCCCC----CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH-------
Q ss_conf 153322101999998677887----530312357878767677999059999999999389901675786147-------
Q 003698 659 EYWRLSDEKGKPPGVVGWWPS----RAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS------- 727 (802)
Q Consensus 659 ~~~~l~~~~~~~~~~~~~~P~----~~vnflenHDt~R~~~~~~~~~~~~~~A~allltlPGvP~IYyGdE~~------- 727 (802)
....+...+. .....+|. .++||++|||++|+.+.++.+. +.++|++++||+||+|+||||+|++
T Consensus 505 ~~~~~~~~l~---~~~~~~~~~~~~~~~nfl~nHD~~R~~s~~~~~~-~~kla~a~llt~pG~P~IYyGdE~G~~~~~dp 580 (696)
T 4aee_A 505 DLNEFISRIN---NVYAYIPHYKALSLYNMLGSHDVPRIKSMVQNNK-LLKLMYVLIFALPGSPVIYYGDEIGLEGGRDP 580 (696)
T ss_dssp CHHHHHHHHH---HHHTTSCHHHHHHCEECSCCTTSCCHHHHHCCHH-HHHHHHHHHHHSSSEEEEETTGGGTCCCCSTT
T ss_pred CHHHHHHHHH---HHHHHCCHHHHHHEEEECCCCCCCEEHHHCCCCH-HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
T ss_conf 8999999999---9998653123211067307999873222419739-99999999985899608981311053589996
Q ss_pred -------H--------HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE---CCEEEEEEECCCCCCC----C---
Q ss_conf -------9--------9999999999998284454798228730797999997---9979999967999999----9---
Q 003698 728 -------H--------YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII---DEKVAMKLGPGHYEPP----S--- 782 (802)
Q Consensus 728 -------W--------l~~~ikkLi~lRk~~~al~~G~~~~l~~~~~v~a~~r---~~~~lvvinn~~~~~~----~--- 782 (802)
| ++++|++|++||+++++|+.|.++.+..++++++|.| ++.++|++|++..... .
T Consensus 581 ~~R~~~~W~~~~~~~~l~~~~k~Li~lRk~~~al~~g~~~~~~~~~~v~af~R~~~~~~~lVv~N~s~~~~~v~l~~~~~ 660 (696)
T 4aee_A 581 DNRRPMIWDRGNWDLELYEHIKKLIRIYKSCRSMRHGYFLVENLGSNLLFIKRWINNEEIIFLLNVSSKDISVDLKKLGK 660 (696)
T ss_dssp TTCCCCCCCGGGSCHHHHHHHHHHHHHHHHCHHHHSCEEEEEECSTTEEEEEEEETTEEEEEEEECSSSCEECCCC----
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCCCEEEECCCCCC
T ss_conf 54478588877775699999999999974397760784799955997999999909998999998999988997347887
Q ss_pred ------------CCCCEEEEECCCCEEEEEC
Q ss_conf ------------9988299973997089762
Q 003698 783 ------------GSQNWSFVTEGRDYKVWEA 801 (802)
Q Consensus 783 ------------~~~~~~~~~~g~~y~~w~~ 801 (802)
..+..++.++.+++.||+.
T Consensus 661 ~~~dllsg~~~~~~g~~~l~L~p~~~~il~~ 691 (696)
T 4aee_A 661 YSFDIYNEKNIDQHVENNVLLRGYGFLILGS 691 (696)
T ss_dssp CCEETTTCCC--------CEECTTCEEEEES
T ss_pred EEEECCCCCEECCCCEEEEEECCCEEEEEEE
T ss_conf 3799666946523880799989998999995
No 4
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=1.00 E-value=1 Score=532.18 Aligned_cols=399 Identities=17% Similarity=0.217 Sum_probs=290.4
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 35653002334458782110012469999989999877631688545513799998899999988788964987999499
Q 003698 371 AAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPP 450 (802)
Q Consensus 371 ~av~YqIf~Drf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~F~W~~~~~GGdl~Gi~~kLdYLk~LGVt~I~L~P 450 (802)
.+|+||||||||++++++++...... ......+ ...| +||||+||+++||||++||||+|||+|
T Consensus 106 ~~viY~i~~drF~~gd~~nd~~~~~~---~~~~~~~-------~~~~------~gGdl~gi~~~Ldyl~~LGv~aI~l~P 169 (601)
T 3edf_A 106 GDAIYQIMPDRFANGDPSNDNVAGMR---EQADRRH-------GGGR------HGGDIRGTIDHLDYIAGLGFTQLWPTP 169 (601)
T ss_dssp TCCEEEECHHHHCCSCGGGSSCTTCS---CCCCTTS-------TTSC------CCCCHHHHHHTHHHHHHTTCCEEEESC
T ss_pred CCEEEEEEHHHHCCCCCCCCCCCCCC---CCCCCCC-------CCCC------CCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 57599994587568998757676755---6667666-------5654------574899999978999876999899896
Q ss_pred CCCCC----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87899----99999976688558899998899999999878298999985127522568898998755799777778766
Q 003698 451 PTESV----SPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIFGGRLNWDDRAV 526 (802)
Q Consensus 451 I~~~~----s~hGY~~~Dy~~iDp~lGt~edlk~LV~~aH~~GIkVILD~V~NHtg~~~~~~~g~~~~f~g~~~w~~~~~ 526 (802)
|+++. ++|||++.||++|||+|||++||++||++||++|||||||+|+|||+.+|+++... ++.+++.|.+...
T Consensus 170 i~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~--p~~dw~~~~~~~~ 247 (601)
T 3edf_A 170 LVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWMKDL--PTPDWINYGGKFV 247 (601)
T ss_dssp CEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSGGGGSC--SSTTSBGGGGSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHC--CCCCCEEECCCCC
T ss_conf 52478988887885820005445447999999999999997699899997776667752466507--7667455079888
Q ss_pred CCCCC---CCCCCCC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH
Q ss_conf 68998---8889998------88899889997656899689999999999987520976578633245542038999994
Q 003698 527 VADDP---HFQGRGN------KSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEA 597 (802)
Q Consensus 527 ~~~~~---~f~~~~~------~~~~~~~~~lpdlN~~np~Vr~~i~~~l~~Wi~~~GIDGfRlD~a~~i~~~~~~~~~~~ 597 (802)
..... .+..... +..++....+||||++||+|+++|+++++||++++||||||||++++++.+||++++++
T Consensus 248 ~~~~~~~~~~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi~~~GVDGfRlD~~~~~~~~f~~~~~~~ 327 (601)
T 3edf_A 248 PTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTRR 327 (601)
T ss_dssp BCCCCGGGGGCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTCSEEEESSGGGSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 87665554458987612365443553546666113399799999999999998625977899606455788999999999
Q ss_pred ---CCCC-EEEEEECCCCC-----CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCH----HHHHHH
Q ss_conf ---0996-79983017976-----5546678870577899999986269984344530257889953001----153322
Q 003698 598 ---TEPY-FAVGEYWDSLS-----YTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRC----EYWRLS 664 (802)
Q Consensus 598 ---~~p~-fliGE~w~~~~-----~l~g~mny~~~~~~~~i~~~~~~~~g~~~~fd~~l~~~l~~~~~~~----~~~~l~ 664 (802)
.+|+ +++||+|.... |..+..... ....++.++++|++...+..++... ....+.
T Consensus 328 v~~~~p~~~~vgE~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~v~nf~~~~~l~~~~~~~~~~~~~~~l~ 395 (601)
T 3edf_A 328 LMAEYPRLNMVGQEWSTRVPVVARWQRGKANFD------------GYTSHLPSLMDFPLVDAMRNALSKTGEENGLNEVY 395 (601)
T ss_dssp HHHHCTTCEEEECCCCSCHHHHHTTSTTCCCTT------------CCCCCCCEEBCHHHHHHHHHHHHCTTSSSTTHHHH
T ss_pred HHHHCCCEEEEEEECCCCHHHHHHHHCCCCCCC------------CCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 987589827984003786677766624642233------------32456874777089999999983563456799999
Q ss_pred HHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH-----------------
Q ss_conf 101999998677887530312357878767677999059999999999389901675786147-----------------
Q 003698 665 DEKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS----------------- 727 (802)
Q Consensus 665 ~~~~~~~~~~~~~P~~~vnflenHDt~R~~~~~~~~~~~~~~A~allltlPGvP~IYyGdE~~----------------- 727 (802)
..+.. ......|...++|++|||++|+.+.++.+..+.++|++++||+||+|+||||+|++
T Consensus 396 ~~~~~--~~~~~~~~~~~~fl~NHD~~R~~s~~~~~~~~~k~a~alllt~pG~P~IYyG~E~G~~~~~~~~~d~~~R~~~ 473 (601)
T 3edf_A 396 ETLSL--DYLYPEPQNLVLFGGNHDMARMFSAAGEDFDRWRMNLVFLMTMPRIPQFYSGDEILMTSTVKGRDDASYRRDF 473 (601)
T ss_dssp HHHGG--GGGSSCGGGSEEESCCTTSCCHHHHTTTCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCCSSCCGGGGCCCC
T ss_pred HHHHH--HCCCCCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHCCCCCCCCCCCCCHHHHHCC
T ss_conf 98765--2246783304775126788873020288899999999999865997599800111656888778984255247
Q ss_pred ---H-------------------HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE---CCEEEEEEECCCCCCC-
Q ss_conf ---9-------------------9999999999998284454798228730797999997---9979999967999999-
Q 003698 728 ---H-------------------YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII---DEKVAMKLGPGHYEPP- 781 (802)
Q Consensus 728 ---W-------------------l~~~ikkLi~lRk~~~al~~G~~~~l~~~~~v~a~~r---~~~~lvvinn~~~~~~- 781 (802)
| ++++|++|++|||++++|+.|.+..+..++++++|.| ++.++|++|++.....
T Consensus 474 p~~W~~~~~~~F~~~~~~~~~~~l~~~~~~Li~lRk~~~al~~G~~~~~~~~~~v~af~R~~~~~~vlVv~N~s~~~~~~ 553 (601)
T 3edf_A 474 PGGWAGDKANAFSGAGLTSQQRAAQDLVRKLANWRKNQPVIHNGRLMHFGPEENTWVYFRYNKDKRIMVAMNNNDKPMTL 553 (601)
T ss_dssp TTSSTTCSSBTTTTBTCCHHHHHHHHHHHHHHHHHHTCHHHHHSEEEECCCBTTEEEEEEECSSEEEEEEEECSSSCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCEEE
T ss_conf 66767543467673235624589999999999998638343478569997369899999983998899999898997899
Q ss_pred ---C------CCC-------------CEEEEECCCCEEEEEC
Q ss_conf ---9------998-------------8299973997089762
Q 003698 782 ---S------GSQ-------------NWSFVTEGRDYKVWEA 801 (802)
Q Consensus 782 ---~------~~~-------------~~~~~~~g~~y~~w~~ 801 (802)
. ... .-++.++.+++.||+.
T Consensus 554 ~l~~~~~~l~~~~~~~dllsg~~~~~~~~l~L~p~~~~Vl~~ 595 (601)
T 3edf_A 554 PTARFQEMLKGAPSGVDFLSGKTVGLGRELRLAPKSVVVIEL 595 (601)
T ss_dssp EGGGGHHHHTTCCEEEETTTCCEEECSSEEEECTTCEEEEEE
T ss_pred ECCCCHHHCCCCCCEEECCCCCEEEECCEEEECCCEEEEEEE
T ss_conf 776312101578704883569678604279989998999999
No 5
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=1.00 E-value=1 Score=524.66 Aligned_cols=374 Identities=18% Similarity=0.263 Sum_probs=272.8
Q ss_pred HHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 532356530023344-5878211001246999998999987763168854551379999889999998878896498799
Q 003698 368 EKLAAEAYSIFRTTA-PTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVI 446 (802)
Q Consensus 368 ~~~~av~YqIf~Drf-~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~F~W~~~~~GGdl~Gi~~kLdYLk~LGVt~I 446 (802)
|-.-+|+|||||||| ++++++++..- ... ...++. .....+|. +|||+||+++|||||+||||+|
T Consensus 8 W~~~~viYqi~~~~F~~~gd~~~d~~~---~~~-~~~w~~----~~~~~~~~------~Gdl~gi~~~LdyL~~LGv~~I 73 (488)
T 2wc7_A 8 WVKHAVFYQIFPDRFARSKQPRKRLLQ---EAR-WEDWDS----MPTLQGYK------GGDLWGIMEDLDYIQNLGINAI 73 (488)
T ss_dssp HHHTCCEEEECGGGTCCCSSCCCCSCT---TCC-GGGGGG----CHHHHC-C------CCCHHHHHHTHHHHHHHTCCEE
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCC---CCC-CCCCCC----CCCCCCCC------CCCHHHHHHHHHHHHHCCCCEE
T ss_conf 123655999863410579996677665---544-455567----87657667------8699999984599997599989
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-----CCCCCCCCCCCC
Q ss_conf 949987899999999766885588999988999999998782989999851275225688989-----987557997777
Q 003698 447 WLPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQN-----GVWNIFGGRLNW 521 (802)
Q Consensus 447 ~L~PI~~~~s~hGY~~~Dy~~iDp~lGt~edlk~LV~~aH~~GIkVILD~V~NHtg~~~~~~~-----g~~~~f~g~~~w 521 (802)
||+|||+++++|||++.||++|||+|||++||++||++||++|||||||+|+|||+.+|+++. +..++|.+++.|
T Consensus 74 ~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~~~~~~~~s~y~~~y~~ 153 (488)
T 2wc7_A 74 YFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFHDVLENGPHSPWVNWFKI 153 (488)
T ss_dssp EESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSSSHHHHHHHHHGGGCTTGGGBCB
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEE
T ss_conf 98987778888997876756557124999999999999998899899996778677767879999854899987774562
Q ss_pred CCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCH-HHHHHHHH-
Q ss_conf 78766689988889--998888998899976568996899999999999875209765786332455420-38999994-
Q 003698 522 DDRAVVADDPHFQG--RGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGG-YVKDYLEA- 597 (802)
Q Consensus 522 ~~~~~~~~~~~f~~--~~~~~~~~~~~~lpdlN~~np~Vr~~i~~~l~~Wi~~~GIDGfRlD~a~~i~~~-~~~~~~~~- 597 (802)
...+.. .+.+ ..++..+.+...+||||++||+||++|++++++|+ ++||||||||++++++.+ |++++.+.
T Consensus 154 ~~~~~~----~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl-~~gvDGfR~D~~~~i~~~~~~~~~~~~~ 228 (488)
T 2wc7_A 154 EGWPLS----PYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWL-KFGIDGWRLDVPFEIKTPGFWQEFRDRT 228 (488)
T ss_dssp CSSSCC----SSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHTCCEEEESSGGGCCCTTHHHHHHHHH
T ss_pred CCCCCC----CCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHH-HCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 588877----77777788765658988767015599999999999999999-7799999980525468689999999999
Q ss_pred --CCCC-EEEEEECCCC-CCCCC-----CCCCCCHHHHHHHHHHHHHCCC---CCCCCCCH-----HHHHHHHHHHCHHH
Q ss_conf --0996-7998301797-65546-----6788705778999999862699---84344530-----25788995300115
Q 003698 598 --TEPY-FAVGEYWDSL-SYTYG-----EMDHNQDAHRQRIIDWINAASG---TAGAFDVT-----TKGILHSALDRCEY 660 (802)
Q Consensus 598 --~~p~-fliGE~w~~~-~~l~g-----~mny~~~~~~~~i~~~~~~~~g---~~~~fd~~-----l~~~l~~~~~~~~~ 660 (802)
.+|+ +++||+|... .|+.+ .|+|.+ +..+.+++..... +.....+. ....+...+
T Consensus 229 ~~~~p~~~~vgE~~~~~~~~~~~~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 300 (488)
T 2wc7_A 229 KAINPEAYIVGEVWGDSRQWLDGTQFDGVMNYLF---AGPTIAFAAGDRVVLEQVQSRDYQPYPPLFAAEYATKI----- 300 (488)
T ss_dssp HHHCTTCEEEECCCSCCGGGCSSSSCSEEEEHHH---HHHHHHHHTGGGCCGGGCCTTTCCCCSCCCHHHHHHHH-----
T ss_pred HHHCCCEEEEEEECCCCHHHHCCCCCCCEECCHH---HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-----
T ss_conf 8548981899985577177644777582407158---99999998257643211244444455678999999999-----
Q ss_pred HHHHHHCCCCCCCCCCCC----CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH---------
Q ss_conf 332210199999867788----7530312357878767677999059999999999389901675786147---------
Q 003698 661 WRLSDEKGKPPGVVGWWP----SRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS--------- 727 (802)
Q Consensus 661 ~~l~~~~~~~~~~~~~~P----~~~vnflenHDt~R~~~~~~~~~~~~~~A~allltlPGvP~IYyGdE~~--------- 727 (802)
... ...+| ..+++|++|||++|+.+.++.+..+.++|++++||+||+|+||||+|++
T Consensus 301 ---~~~-------~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~~~ll~~pG~P~iy~G~E~g~~~~~d~~~ 370 (488)
T 2wc7_A 301 ---QEV-------LQLYPWEIQLTQLNLLASHDTARLMTIAGGDIASVELSTLLLLTFPGAPSIYYGDEVGLPGGIDPDS 370 (488)
T ss_dssp ---HHH-------HTSSCHHHHTTCEECSCCTTSCCHHHHTTTCHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCCC---
T ss_pred ---HHH-------HHHCCCHHHCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHH
T ss_conf ---999-------9865512101006753554455687763785999999999998289985798730357579999123
Q ss_pred ---------H---HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE---CCEEEEEEECCCC
Q ss_conf ---------9---9999999999998284454798228730797999997---9979999967999
Q 003698 728 ---------H---YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII---DEKVAMKLGPGHY 778 (802)
Q Consensus 728 ---------W---l~~~ikkLi~lRk~~~al~~G~~~~l~~~~~v~a~~r---~~~~lvvinn~~~ 778 (802)
| ++++||+|++|||++++|+.|.++.+..++++++|.| +++++|++|++..
T Consensus 371 r~~~~~~~~~~~~~~~~~~~Li~lRk~~~~l~~g~~~~~~~~~~v~a~~R~~~~~~~~v~~N~~~~ 436 (488)
T 2wc7_A 371 RRGFPLEANWNQEIFNTHRQLITIRQTYPALRTGDYQVLYAQGQLYLFARTLGTEELIIAINAGTS 436 (488)
T ss_dssp -CCCTTC-CCCHHHHHHHHHHHHHHHHCTHHHHSEEEEEEEETTEEEEEEEETTEEEEEEEECSSS
T ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCC
T ss_conf 337788443688999999999999723920247876999418979999998799889999989898
No 6
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=1.00 E-value=1 Score=519.63 Aligned_cols=362 Identities=18% Similarity=0.299 Sum_probs=269.6
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 32356530023344587821100124699999899998776316885455137999988999999887889649879994
Q 003698 369 KLAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWL 448 (802)
Q Consensus 369 ~~~av~YqIf~Drf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~F~W~~~~~GGdl~Gi~~kLdYLk~LGVt~I~L 448 (802)
-..+|+||||||||++++.++... ....++.. ......|. ||||+||+++|||||+||||+|||
T Consensus 132 ~~~~viYqi~~~~F~~~~~~~~~~-------~~~~w~~~---~~~~~~~~------~G~~~gi~~~LdyLk~LGvt~I~L 195 (588)
T 1j0h_A 132 VKDTVWYQIFPERFANGNPSISPE-------GSRPWGSE---DPTPTSFF------GGDLQGIIDHLDYLVDLGITGIYL 195 (588)
T ss_dssp GGGCCEEEECGGGTCCSCGGGSCT-------TCCCTTSS---CCCSSCCC------CCCHHHHHHTHHHHHHHTCCEEEE
T ss_pred CCCCEEEEECCHHHCCCCCCCCCC-------CCCCCCCC---CCCCCCCC------CCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 136679998122436999776755-------55556777---87655357------879999999889998769998997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-----CCCCCCCCCCCCCC
Q ss_conf 9987899999999766885588999988999999998782989999851275225688989-----98755799777778
Q 003698 449 PPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQN-----GVWNIFGGRLNWDD 523 (802)
Q Consensus 449 ~PI~~~~s~hGY~~~Dy~~iDp~lGt~edlk~LV~~aH~~GIkVILD~V~NHtg~~~~~~~-----g~~~~f~g~~~w~~ 523 (802)
+||++++++|||++.||++|||+|||++||++||++||++||+||||+|+|||+.+++++. |..+.|.+++.|..
T Consensus 196 ~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~dwy~~~~ 275 (588)
T 1j0h_A 196 TPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIHE 275 (588)
T ss_dssp CCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHHHHGGGCTTGGGBCBSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 98645899999286665755846799999999999999889999999876767565235778975489997545543356
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH---CC
Q ss_conf 76668998888-999888899889997656899689999999999987520976578633245542038999994---09
Q 003698 524 RAVVADDPHFQ-GRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEA---TE 599 (802)
Q Consensus 524 ~~~~~~~~~f~-~~~~~~~~~~~~~lpdlN~~np~Vr~~i~~~l~~Wi~~~GIDGfRlD~a~~i~~~~~~~~~~~---~~ 599 (802)
.+. +. ..+.+..+.+...+|+||++||+||++|+++++||++++||||||||+++++..+|++++.++ .+
T Consensus 276 ~~~------~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~giDGfR~D~a~~~~~~f~~~~~~~v~~~~ 349 (588)
T 1j0h_A 276 FPL------QTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALK 349 (588)
T ss_dssp SSC------CCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHHHHC
T ss_pred CCC------CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 887------77999886774698886500349989999999999999986598689995355479999999999778758
Q ss_pred CC-EEEEEECCCC-CCCCC-----CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCC
Q ss_conf 96-7998301797-65546-----67887057789999998626998434453025788995300115332210199999
Q 003698 600 PY-FAVGEYWDSL-SYTYG-----EMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPG 672 (802)
Q Consensus 600 p~-fliGE~w~~~-~~l~g-----~mny~~~~~~~~i~~~~~~~~g~~~~fd~~l~~~l~~~~~~~~~~~l~~~~~~~~~ 672 (802)
|+ +++||+|... .|+.| .|||. ++..+.+++.... .+. ..+...+.. .
T Consensus 350 p~~~~igE~~~~~~~~~~g~~~d~~~n~~---~~~~~~~~~~~~~-----~~~---~~~~~~l~~--------~------ 404 (588)
T 1j0h_A 350 PDVYILGEIWHDAMPWLRGDQFDAVMNYP---FTDGVLRFFAKEE-----ISA---RQFANQMMH--------V------ 404 (588)
T ss_dssp TTCEEEECCSSCCGGGCSSSSCSEEBCHH---HHHHHHHHHTSCC-----SCH---HHHHHHHHH--------H------
T ss_pred CCEEEEEEECCCHHHHHCCCCCCEEECHH---HHHHHHHHHHCCC-----CCH---HHHHHHHHH--------H------
T ss_conf 98599997557515565389757797738---8999999983599-----999---999999999--------9------
Q ss_pred CCCCCC----CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH--------------H------
Q ss_conf 867788----7530312357878767677999059999999999389901675786147--------------9------
Q 003698 673 VVGWWP----SRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS--------------H------ 728 (802)
Q Consensus 673 ~~~~~P----~~~vnflenHDt~R~~~~~~~~~~~~~~A~allltlPGvP~IYyGdE~~--------------W------ 728 (802)
...+| ..+++|++|||+.|+.+.++.+.++.++|++++||+||+|+||||+|++ |
T Consensus 405 -~~~y~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~~a~~~~~~~pG~P~iy~G~E~g~~~~~dp~~r~~~~W~~~~~~ 483 (588)
T 1j0h_A 405 -LHSYPNNVNEAAFNLLGSHDTSRILTVCGGDIRKVKLLFLFQLTFTGSPCIYYGDEIGMTGGNDPECRKCMVWDPMQQN 483 (588)
T ss_dssp -HHTSCHHHHHTCBCBSCCTTSCCHHHHTTTCHHHHHHHHHHHHHSSSCCEEETTGGGTCCCCSTTGGGCCCCCCTTTSC
T ss_pred -HHHCCCCHHHHHEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf -9864632110322623789974044551983999999999998489974899401358668999654188389987771
Q ss_pred --HHHHHHHHHHHHHHCCCCCCCCEEEEEE--CCCEEEEEE---CCEEEEEEECCCC
Q ss_conf --9999999999998284454798228730--797999997---9979999967999
Q 003698 729 --YRQEIEALLSVRKRNKIHCRSRVEIVKA--ERDVYAAII---DEKVAMKLGPGHY 778 (802)
Q Consensus 729 --l~~~ikkLi~lRk~~~al~~G~~~~l~~--~~~v~a~~r---~~~~lvvinn~~~ 778 (802)
++++||+|++|||++++|+.|.++++.. ++++++|.| ++.++|++|.+..
T Consensus 484 ~~l~~~~~~Li~lRk~~~al~~g~~~~~~~~~~~~v~a~~R~~~~~~~lvv~N~~~~ 540 (588)
T 1j0h_A 484 KELHQHVKQLIALRKQYRSLRRGEISFLHADDEMNYLIYKKTDGDETVLVIINRSDQ 540 (588)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHCEEEEECCSCTTTEEEEEEECSSCEEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCC
T ss_conf 899999999999983498871775899997799989999998799989999989999
No 7
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=1.00 E-value=1 Score=518.26 Aligned_cols=370 Identities=18% Similarity=0.240 Sum_probs=271.8
Q ss_pred HHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 2356530023344-587821100124699999899998776316885455137999988999999887889649879994
Q 003698 370 LAAEAYSIFRTTA-PTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWL 448 (802)
Q Consensus 370 ~~av~YqIf~Drf-~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~F~W~~~~~GGdl~Gi~~kLdYLk~LGVt~I~L 448 (802)
..+|+|||||||| ++++++++..- ... ..++... ....|. +|||+||+++|||||+||||+|||
T Consensus 5 ~~~viYqi~~~~F~~~gd~~~~~~g---~~~--~~~~~~~----~~~~~~------~G~~~gi~~~LdyL~~LGv~~I~l 69 (475)
T 2z1k_A 5 EGAFFYQIFPDRFFRAGPPGRPAPA---GPF--EPWEAPP----TLRGFK------GGTLWGVAEKLPYLLDLGVEAIYL 69 (475)
T ss_dssp SSCCEEEECGGGSCCCSCCCSSCCC---SCC--CCTTSCC----CSSCCC------CCCHHHHHHTHHHHHHHTCCEEEE
T ss_pred CCCEEEEECCCEECCCCCCCCCCCC---CCC--CCCCCCC----CCCCCC------CCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 3765999813712679896567776---665--6556788----756557------879999999768999729988997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-----CCCCCCCCCCCCCC
Q ss_conf 9987899999999766885588999988999999998782989999851275225688989-----98755799777778
Q 003698 449 PPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQN-----GVWNIFGGRLNWDD 523 (802)
Q Consensus 449 ~PI~~~~s~hGY~~~Dy~~iDp~lGt~edlk~LV~~aH~~GIkVILD~V~NHtg~~~~~~~-----g~~~~f~g~~~w~~ 523 (802)
+||+++.++|||++.||++|||+|||++||++||++||++||+||||+|+|||+.+|+++. +..+.|.+++.|..
T Consensus 70 ~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~ 149 (475)
T 2z1k_A 70 NPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQHLMENGEQSPYRDWYHVKG 149 (475)
T ss_dssp CCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEECCC
T ss_conf 98767888888587776744735699999999999999889989999714624477788999975489997765136178
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCH-HHHHHHHH---CC
Q ss_conf 766689988889998888998899976568996899999999999875209765786332455420-38999994---09
Q 003698 524 RAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGG-YVKDYLEA---TE 599 (802)
Q Consensus 524 ~~~~~~~~~f~~~~~~~~~~~~~~lpdlN~~np~Vr~~i~~~l~~Wi~~~GIDGfRlD~a~~i~~~-~~~~~~~~---~~ 599 (802)
.+.. .+.+.+++..+.+...+|+||++||+||++|++++++|+ ++||||||||++++++.. |++++.+. .+
T Consensus 150 ~~~~----~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~-~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~~ 224 (475)
T 2z1k_A 150 FPLK----AYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWI-RFGVDGWRLDVPNEIPDPTFWREFRQRVKGAN 224 (475)
T ss_dssp SSCC----TTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHTCCEEEESSGGGCCCHHHHHHHHHHHHHHC
T ss_pred CCCC----CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 8876----778887733257989868204599999999999999999-77997995064144797999999999876228
Q ss_pred CC-EEEEEECCCC-CCCCC-----CCCCCCHHHHHHHHHHHHHCCCC---CCCCCCH-----HHHHHHHHHHCHHHHHHH
Q ss_conf 96-7998301797-65546-----67887057789999998626998---4344530-----257889953001153322
Q 003698 600 PY-FAVGEYWDSL-SYTYG-----EMDHNQDAHRQRIIDWINAASGT---AGAFDVT-----TKGILHSALDRCEYWRLS 664 (802)
Q Consensus 600 p~-fliGE~w~~~-~~l~g-----~mny~~~~~~~~i~~~~~~~~g~---~~~fd~~-----l~~~l~~~~~~~~~~~l~ 664 (802)
|+ +++||+|... .++.+ .+||. ++..+.+++...... .....+. ....+... +.
T Consensus 225 p~~~~igE~~~~~~~~~~~~~~d~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~ 293 (475)
T 2z1k_A 225 PEAYIVGEIWEEADFWLQGDMFDAVMNYP---LARAVLGFVGGEALDRDLAAQTGLGRIEPLQALAFSHR--------LE 293 (475)
T ss_dssp TTCEEEECCSSCCSGGGSSSSCSEEBCHH---HHHHHHHHHHGGGSCHHHHTTSTTCSCCCCCHHHHHHH--------HH
T ss_pred CCCEEEEEECCCCCCCCCCCCCCEEECHH---HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH--------HH
T ss_conf 98279998557863114578767254736---89999999707864322223333355567899999999--------99
Q ss_pred HHCCCCCCCCCCC----CCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH-------------
Q ss_conf 1019999986778----87530312357878767677999059999999999389901675786147-------------
Q 003698 665 DEKGKPPGVVGWW----PSRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS------------- 727 (802)
Q Consensus 665 ~~~~~~~~~~~~~----P~~~vnflenHDt~R~~~~~~~~~~~~~~A~allltlPGvP~IYyGdE~~------------- 727 (802)
.. ...+ +..+++|++|||+.|+.+.++.+..+.++|++++||+||+|+||||+|++
T Consensus 294 ~~-------~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~a~ll~~pG~P~iy~G~E~g~~~~~d~~~r~~~ 366 (475)
T 2z1k_A 294 DL-------FGRYRPEVVRAQMNLLTSHDTPRLLSLMRGSVERARLALALLFLLPGNPTVYYGEEVGMAGGKDPENRGGM 366 (475)
T ss_dssp HH-------TTSSCHHHHTTCEECSCCTTSCCHHHHTTTCHHHHHHHHHHHTTSSSEEEEETTGGGTCCCCSTTTTCCCC
T ss_pred HH-------HHHCCCHHHHHHEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCC
T ss_conf 99-------98654122121056236886556777618839999999999981899877984124586799982213698
Q ss_pred -H--------HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCEEEEEEECCCC
Q ss_conf -9--------99999999999982844547982287307979999979979999967999
Q 003698 728 -H--------YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHY 778 (802)
Q Consensus 728 -W--------l~~~ikkLi~lRk~~~al~~G~~~~l~~~~~v~a~~r~~~~lvvinn~~~ 778 (802)
| ++++|++|++|||++++|+.|.++.+..++++++|.| +.++|++|.+..
T Consensus 367 ~W~~~~~~~~l~~~~~~Li~lRk~~~~l~~g~~~~~~~~~~v~a~~R-~~~lv~~N~~~~ 425 (475)
T 2z1k_A 367 VWEEARWQKDLRETVKRLARLRKEHPALRTAPYLRIYAQDGHLAFAR-GPYLAVVNASPH 425 (475)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHHHCTHHHHSCCEEEEEETTEEEEEE-TTEEEEEECSSS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCEEEEEE-CEEEEEEECCCC
T ss_conf 98866662799999999999984597555785699950798999997-729999999998
No 8
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=1.00 E-value=1 Score=517.47 Aligned_cols=362 Identities=19% Similarity=0.279 Sum_probs=268.8
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 23565300233445878211001246999998999987763168854551379999889999998878896498799949
Q 003698 370 LAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLP 449 (802)
Q Consensus 370 ~~av~YqIf~Drf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~F~W~~~~~GGdl~Gi~~kLdYLk~LGVt~I~L~ 449 (802)
..+++|||||+||++++.++.... ...++.. . ......|. ||||+||+++|||||+||||+|||+
T Consensus 129 ~~~viYqi~~~~F~~~~~~~~~~~-------~~~w~~~-~-~~~~~~f~------~G~~~gi~~~LdyLk~LGvt~I~L~ 193 (585)
T 1wzl_A 129 KEAVIYQIFPERFANGDPSNDPPG-------TEQWAKD-A-RPRHDSFY------GGDLKGVIDRLPYLEELGVTALYFT 193 (585)
T ss_dssp GGCCEEEECGGGTCCCCGGGCCTT-------CCCCCTT-C-CCCTTCCC------CCCHHHHHHTHHHHHHHTCCEEEEC
T ss_pred CCCEEEEECCHHHCCCCCCCCCCC-------CCCCCCC-C-CCCCCCCC------CCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 154699981413258996656555-------5666766-7-87645457------8798999987589987699889978
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-----CCCCCCCCCCCCCCC
Q ss_conf 987899999999766885588999988999999998782989999851275225688989-----987557997777787
Q 003698 450 PPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQN-----GVWNIFGGRLNWDDR 524 (802)
Q Consensus 450 PI~~~~s~hGY~~~Dy~~iDp~lGt~edlk~LV~~aH~~GIkVILD~V~NHtg~~~~~~~-----g~~~~f~g~~~w~~~ 524 (802)
||++++++|||++.||++|||+|||++||++||++||++||+||||+|+|||+.+++++. |..++|.+++.|...
T Consensus 194 Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~ 273 (585)
T 1wzl_A 194 PIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIEDF 273 (585)
T ss_dssp CCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBSSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCC
T ss_conf 86668888992865536527246999999999999998799999997677677765879998745999876674685688
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH---CCC
Q ss_conf 6668998888999888899-889997656899689999999999987520976578633245542038999994---099
Q 003698 525 AVVADDPHFQGRGNKSSGD-NFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEA---TEP 600 (802)
Q Consensus 525 ~~~~~~~~f~~~~~~~~~~-~~~~lpdlN~~np~Vr~~i~~~l~~Wi~~~GIDGfRlD~a~~i~~~~~~~~~~~---~~p 600 (802)
+.. -...+.+..+. +...+|+||++||+||++|++++++|+ ++||||||||+++++..+|++++.++ .+|
T Consensus 274 ~~~-----~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl-~~gvDGfR~D~a~~~~~~f~~~~~~~v~~~~p 347 (585)
T 1wzl_A 274 PVS-----KTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQGIDGWRLDVANEVDHAFWREFRRLVKSLNP 347 (585)
T ss_dssp SCC-----CSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHHHHHHHCT
T ss_pred CCC-----CCCCCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHH-HCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 888-----898988137146999878417699899999999999998-57980999835344799999999999997789
Q ss_pred C-EEEEEECCCC-CCCCC-----CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCC
Q ss_conf 6-7998301797-65546-----678870577899999986269984344530257889953001153322101999998
Q 003698 601 Y-FAVGEYWDSL-SYTYG-----EMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPGV 673 (802)
Q Consensus 601 ~-fliGE~w~~~-~~l~g-----~mny~~~~~~~~i~~~~~~~~g~~~~fd~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 673 (802)
+ +++||+|... .|+.+ .|||. ++..+.+++.... .+. ..+...+. ..
T Consensus 348 ~~~~igE~~~~~~~~~~~~~~d~~~n~~---~~~~~~~~~~~~~-----~~~---~~~~~~l~--------~~------- 401 (585)
T 1wzl_A 348 DALIVGEIWHDASGWLMGDQFDSVMNYL---FRESVIRFFATGE-----IHA---ERFDAELT--------RA------- 401 (585)
T ss_dssp TCEEEECCSSCCGGGCSSSSCSEEBCHH---HHHHHHHHHTSCC-----SCH---HHHHHHHH--------HH-------
T ss_pred CEEEEEEECCCHHHHHCCCCCCEEECHH---HHHHHHHHHCCCC-----CCH---HHHHHHHH--------HH-------
T ss_conf 9799998627647876489847898888---9999999863799-----999---99999999--------99-------
Q ss_pred CCCCC----CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH--------------H-------
Q ss_conf 67788----7530312357878767677999059999999999389901675786147--------------9-------
Q 003698 674 VGWWP----SRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS--------------H------- 728 (802)
Q Consensus 674 ~~~~P----~~~vnflenHDt~R~~~~~~~~~~~~~~A~allltlPGvP~IYyGdE~~--------------W------- 728 (802)
...+| ..+++|++|||+.|+.+.++.+.++.++|++++||+||+|+||||+|++ |
T Consensus 402 ~~~y~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~~a~~~~~~~pG~P~iy~G~E~g~~~~~d~~~r~~~~W~~~~~~~ 481 (585)
T 1wzl_A 402 RMLYPEQAAQGLWNLLDSHDTERFLTSCGGNEAKFRLAVLFQMTYLGTPLIYYGDEIGMAGATDPDCLRPMIWEEKEQNR 481 (585)
T ss_dssp HTTSCHHHHTTCEEESCCTTSCCHHHHTTTCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCGGGSCH
T ss_pred HHHCCHHHHCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 98645234201257227887145677618959999999999985899718994001385799991103688998777748
Q ss_pred -HHHHHHHHHHHHHHCCCCCCCCEEEEEEC--CCEEEEEE---CCEEEEEEECCCC
Q ss_conf -99999999999982844547982287307--97999997---9979999967999
Q 003698 729 -YRQEIEALLSVRKRNKIHCRSRVEIVKAE--RDVYAAII---DEKVAMKLGPGHY 778 (802)
Q Consensus 729 -l~~~ikkLi~lRk~~~al~~G~~~~l~~~--~~v~a~~r---~~~~lvvinn~~~ 778 (802)
++++|++|++|||++++|+.|.++++..+ +++++|.| ++.++|++|++..
T Consensus 482 ~l~~~~~~Li~lRk~~~al~~g~~~~~~~~~~~~v~af~R~~~~~~~lvv~N~~~~ 537 (585)
T 1wzl_A 482 GLFEFYKELIRLRHRLASLTRGNVRSWHADKQANLYAFVRTVQDQHVGVVLNNRGE 537 (585)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHCEEEEEEEETTTTEEEEEEEETTEEEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCC
T ss_conf 99999999999983298870872899975799989999998399989999989999
No 9
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=1.00 E-value=1 Score=516.69 Aligned_cols=366 Identities=17% Similarity=0.248 Sum_probs=270.8
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 23565300233445878211001246999998999987763168854551379999889999998878896498799949
Q 003698 370 LAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLP 449 (802)
Q Consensus 370 ~~av~YqIf~Drf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~F~W~~~~~GGdl~Gi~~kLdYLk~LGVt~I~L~ 449 (802)
..+++|||||+||++++.++.... ...++.. ......|. ||||+||+++|||||+||||+|||+
T Consensus 129 ~~~viYqi~~~~F~~~~~~~~~~~-------~~~w~~~---~~~~~~~~------~Gd~~gi~~~LdyLk~LGvt~I~L~ 192 (583)
T 1ea9_C 129 KDAIFYQIFPERFANGDTRNDPEG-------TLPWGSA---DPTPSCFF------GGDLQGVIDHLDHLSKLGVNAVYFT 192 (583)
T ss_dssp HHCCCCEECSTTSCCCCSCSCSSC-------CSCCCSS---SCCCSSCC------CCCHHHHHHTHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECHHHHCCCCCCCCCCC-------CCCCCCC---CCCCCCCC------CCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 366599986277568997667655-------5655677---88656667------8699999984589987599889979
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-----CCCCCCCCCCCCCCCC
Q ss_conf 98789999999976688558899998899999999878298999985127522568898-----9987557997777787
Q 003698 450 PPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQ-----NGVWNIFGGRLNWDDR 524 (802)
Q Consensus 450 PI~~~~s~hGY~~~Dy~~iDp~lGt~edlk~LV~~aH~~GIkVILD~V~NHtg~~~~~~-----~g~~~~f~g~~~w~~~ 524 (802)
|||+++++|||++.||++|||+|||++||++||++||++||+||||+|+|||+.+++++ +|..++|.+++.|...
T Consensus 193 Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~ 272 (583)
T 1ea9_C 193 PLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSL 272 (583)
T ss_dssp CCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCC
T ss_conf 87668888996865524347124999999999999998899999997466677766879998745889976672574688
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHH---CCCC
Q ss_conf 6668998888999888899889997656899689999999999987520976578633245542038999994---0996
Q 003698 525 AVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEA---TEPY 601 (802)
Q Consensus 525 ~~~~~~~~f~~~~~~~~~~~~~~lpdlN~~np~Vr~~i~~~l~~Wi~~~GIDGfRlD~a~~i~~~~~~~~~~~---~~p~ 601 (802)
+... + ...+++..+.+...+|+||++||+||++|++++++|++++||||||||+++++..+|++++.+. .+|+
T Consensus 273 ~~~~-~---~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gvDGfR~D~~~~~~~~f~~~~~~~v~~~~p~ 348 (583)
T 1ea9_C 273 PLEV-V---DGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPD 348 (583)
T ss_dssp SCCC-T---TSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTCTTSCHHHHHHHHHHHHHHCTT
T ss_pred CCCC-C---CCCCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 8878-8---88877301588788562033999999999999999988639609995651338999999999999866879
Q ss_pred -EEEEEECCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHH--HHHHHHHCCCCCCCCCCC
Q ss_conf -7998301797-655466788705778999999862699843445302578899530011--533221019999986778
Q 003698 602 -FAVGEYWDSL-SYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCE--YWRLSDEKGKPPGVVGWW 677 (802)
Q Consensus 602 -fliGE~w~~~-~~l~g~mny~~~~~~~~i~~~~~~~~g~~~~fd~~l~~~l~~~~~~~~--~~~l~~~~~~~~~~~~~~ 677 (802)
+++||+|... .|+.+. ++++.+++.++..+...+.... ...+...+.. ....+
T Consensus 349 ~~~igE~~~~~~~~~~~~--------------------~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~ 405 (583)
T 1ea9_C 349 AYILGEVWHESSIWLEGD--------------------QFDAVMNYPFTNAVLDFFIHQIADAEKFSFMLGK---QLAGY 405 (583)
T ss_dssp CEEEECCCSCCTTTTTTT--------------------SCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHH---TTTTS
T ss_pred EEEEEEECCCHHHHHCCC--------------------CCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHH---HHHHC
T ss_conf 599998738738886689--------------------8588877799999999972799899999999999---99875
Q ss_pred C----CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHH--------------H--------HHH
Q ss_conf 8----7530312357878767677999059999999999389901675786147--------------9--------999
Q 003698 678 P----SRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS--------------H--------YRQ 731 (802)
Q Consensus 678 P----~~~vnflenHDt~R~~~~~~~~~~~~~~A~allltlPGvP~IYyGdE~~--------------W--------l~~ 731 (802)
| ..+++|++|||+.|+.+.++.+.++.++|++++||+||+|+||||+|++ | +++
T Consensus 406 ~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~la~~~~~~~pG~P~iy~G~E~g~~~~~d~~~r~~~~W~~~~~~~~~~~ 485 (583)
T 1ea9_C 406 PRQASEVMFNLLDSHDTARLLTQADGDKRKMKLAVLFQFTYFGTPCIYYGDEVGLDGGHDPGCRKCMEWDETKHDKDLFA 485 (583)
T ss_dssp CHHHHHTCEECSCCTTSCCHHHHHCSCHHHHHHHHHHHTTSSSEECCCSSCSSCCCCCSHHHHTCCCCCCTTSCCHHHHH
T ss_pred CHHHHHHHEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHHHH
T ss_conf 40444332152478884156666298099999999999728997178823002866899801037858887777289999
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEEEC--CCEEEEEE---CCEEEEEEECCCC
Q ss_conf 99999999982844547982287307--97999997---9979999967999
Q 003698 732 EIEALLSVRKRNKIHCRSRVEIVKAE--RDVYAAII---DEKVAMKLGPGHY 778 (802)
Q Consensus 732 ~ikkLi~lRk~~~al~~G~~~~l~~~--~~v~a~~r---~~~~lvvinn~~~ 778 (802)
+|++|++|||++++|+.|.++++..+ +++++|.| ++.++|++|.+..
T Consensus 486 ~~~~Li~lRk~~~al~~g~~~~~~~~~~~~v~af~R~~~~~~~lvv~N~~~~ 537 (583)
T 1ea9_C 486 FYQTVIRLRQAHAALRTGTFKFLTAEKNSRQIAYLREDDQDTILVVMNNDKA 537 (583)
T ss_dssp HHHHHHHHHHHCSHHHHCCCCCSBCCSSCCEEEEEEECSSCEEEEEEECSSS
T ss_pred HHHHHHHHHHHCHHHCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCC
T ss_conf 9999999965486751686699962799989999998599989999989999
No 10
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=1.00 E-value=1 Score=512.35 Aligned_cols=374 Identities=29% Similarity=0.494 Sum_probs=289.8
Q ss_pred CCEEEEEEEEECCCC-CCCCH-HHHHHHHHHHHHCCCCEEEECCCC----------CCCCCCCCCCCCCCCCC--CCCCC
Q ss_conf 631688545513799-99889-999998878896498799949987----------89999999976688558--89999
Q 003698 409 GFEILCQGFNWESHK-SGRWY-MELKEKATELSSLGFSVIWLPPPT----------ESVSPEGYMPRDLYNLS--SRYGN 474 (802)
Q Consensus 409 ~y~~~~~~F~W~~~~-~GGdl-~Gi~~kLdYLk~LGVt~I~L~PI~----------~~~s~hGY~~~Dy~~iD--p~lGt 474 (802)
...+++|.|.|+++. .|||| +||+++|||||+||||+|||+||+ ++.++|||+ |++|| |+|||
T Consensus 15 ~~~vi~q~F~w~~~~~~gGd~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~---~~~id~~p~~Gt 91 (527)
T 1gcy_A 15 GDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYF---WHDFNKNGRYGS 91 (527)
T ss_dssp GCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTT---CSSSCSCSSSCC
T ss_pred CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCC
T ss_conf 98689998776887565885999999989999864987899497604665446677788888855---210798778989
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 889999999987829899998512752256889899875-57997777787666899888899988889988-9997656
Q 003698 475 IDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWN-IFGGRLNWDDRAVVADDPHFQGRGNKSSGDNF-HAAPNID 552 (802)
Q Consensus 475 ~edlk~LV~~aH~~GIkVILD~V~NHtg~~~~~~~g~~~-~f~g~~~w~~~~~~~~~~~f~~~~~~~~~~~~-~~lpdlN 552 (802)
++||++||++||++||+||||+|+|||+.+++.. .|. .+ .+|+....+.....|. ++++.+..| ..+||||
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~~~~~--~~~~~~---~~~y~~~~~~~~~~~~--~~~~~~~~f~~~~~dLn 164 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMNRGYPDK--EINLPA---GQGFWRNDCADPGNYP--NDCDDGDRFIGGDADLN 164 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTCSSC--SCCCCS---SSSCBGGGSCCCSSSC--BTTBSSCCSTTSTTBBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCC--CCCCCC---CCHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
T ss_conf 9999999999998799899998026757888886--005778---6010233568898736--67556766326677515
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCC-CCEEEEEECCCCCCCCCCCCCCCHH-HHHHHH
Q ss_conf 89968999999999998752097657863324554203899999409-9679983017976554667887057-789999
Q 003698 553 HSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATE-PYFAVGEYWDSLSYTYGEMDHNQDA-HRQRII 630 (802)
Q Consensus 553 ~~np~Vr~~i~~~l~~Wi~~~GIDGfRlD~a~~i~~~~~~~~~~~~~-p~fliGE~w~~~~~l~g~mny~~~~-~~~~i~ 630 (802)
++||+||++|+++++||++++||||||||++++++.+|+++++++++ |.|++||+|....-. ....|.+.. ..+.+.
T Consensus 165 ~~np~Vr~~i~~~~~~w~~~~gvDGfRlDa~~~i~~~f~~~~~~~~~~p~~~vgE~~~~~~~~-~~~~y~~~~~~~~~~~ 243 (527)
T 1gcy_A 165 TGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEY-PNWDWRNTASWQQIIK 243 (527)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSCEEEEEESCGGGSCHHHHHHHHHHHCTTSEEEECCCCCGGGS-CTTSGGGGSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCC-CCCCCCCCCCHHHHHH
T ss_conf 498799999999999999866998699821114889999999997368966999864799865-5432223440566788
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC------CCHHH
Q ss_conf 998626998434453025788995300115332210199999867788753031235787876767799------90599
Q 003698 631 DWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRF------PGGRE 704 (802)
Q Consensus 631 ~~~~~~~g~~~~fd~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~P~~~vnflenHDt~R~~~~~~~------~~~~~ 704 (802)
.|.... ..+.|||.+...+..++. ..+++. ... ......|..+++|++|||+.|+.+.... ..++.
T Consensus 244 ~~~~~~--~~~~fdf~~~~~l~~~~~--~~~~l~-~~~---~~~~~~~~~~~~f~~nHD~~r~~~~~~g~~~~~~~~~~~ 315 (527)
T 1gcy_A 244 DWSDRA--KCPVFDFALKERMQNGSI--ADWKHG-LNG---NPDPRWREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLI 315 (527)
T ss_dssp HHHHHH--TSCEECHHHHHHHHHSCG--GGGGGS-GGG---CSSHHHHTTEEECSCCTTTSBCSSGGGBCCSSCCCGGGH
T ss_pred HHHHCC--CCCEECHHHHHHHHHHHH--HHHHHH-HCC---CCCCCCHHHCEEEEECCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 776425--772544477899999998--753332-048---846557636537876798998666567643566772689
Q ss_pred HHHHHHHHHCCCEEEEECCCHHHH-HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE--CCEEEEEEECCCCCCC
Q ss_conf 999999993899016757861479-9999999999998284454798228730797999997--9979999967999999
Q 003698 705 MQGYAYILTHPGTPSVFYDHIFSH-YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII--DEKVAMKLGPGHYEPP 781 (802)
Q Consensus 705 ~~A~allltlPGvP~IYyGdE~~W-l~~~ikkLi~lRk~~~al~~G~~~~l~~~~~v~a~~r--~~~~lvvinn~~~~~~ 781 (802)
++|++++||+||+|+||||+|++| ++++|++|++|||++++|+.|.++.+..++++|+|.| +++++|++|++...+.
T Consensus 316 ~~a~a~~lt~~G~P~iy~G~E~~W~l~~~~~~Li~lRk~~~al~~g~~~~~~~~~~v~a~~r~~~~~~lv~~N~~~~~~~ 395 (527)
T 1gcy_A 316 RQAYAYILTSPGTPVVYWDHMYDWGYGDFIRQLIQVRRAAGVRADSAISFHSGYSGLVATVSGSQQTLVVALNSDLGNPG 395 (527)
T ss_dssp HHHHHHHHHSSSEEEEEHHHHHTSSCHHHHHHHHHHHHHHTCCTTCEEEECTTSSSEEEEEECSSCEEEEEESCCCCCGG
T ss_pred HHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCE
T ss_conf 99999996799866165253237708999999999998582104772589964798899995689869999877788862
Q ss_pred -CCCCCEEEEECC--CCEEEEEC
Q ss_conf -999882999739--97089762
Q 003698 782 -SGSQNWSFVTEG--RDYKVWEA 801 (802)
Q Consensus 782 -~~~~~~~~~~~g--~~y~~w~~ 801 (802)
...+.|+..+++ ..+.+|..
T Consensus 396 ~v~~g~~~~~~~~~~~~~~~w~~ 418 (527)
T 1gcy_A 396 QVASGSFSEAVNASNGQVRVWRS 418 (527)
T ss_dssp GTCCSCCEEEEEETTTTEEEEEC
T ss_pred EECCCCEEEEEECCCCCEEEEEC
T ss_conf 63288458998468995799972
Done!