Query 003699
Match_columns 802
No_of_seqs 215 out of 665
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 04:21:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003699.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003699hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02305 lipoxygenase 100.0 3E-245 6E-250 2097.4 69.5 789 7-802 121-918 (918)
2 PLN02264 lipoxygenase 100.0 2E-243 3E-248 2083.3 66.7 787 7-802 124-919 (919)
3 PLN02337 lipoxygenase 100.0 2E-239 4E-244 2058.0 69.0 794 2-802 50-866 (866)
4 PF00305 Lipoxygenase: Lipoxyg 100.0 2E-196 5E-201 1698.4 33.9 663 113-786 1-667 (667)
5 cd01751 PLAT_LH2 PLAT/ LH2 dom 99.9 4.8E-27 1E-31 225.5 10.6 99 2-104 31-137 (137)
6 smart00308 LH2 Lipoxygenase ho 98.8 5.9E-09 1.3E-13 95.9 7.4 55 37-91 48-104 (105)
7 PF01477 PLAT: PLAT/LH2 domain 98.7 3.3E-08 7.2E-13 91.4 7.9 64 37-102 46-113 (113)
8 cd00113 PLAT PLAT (Polycystin- 98.5 6.9E-07 1.5E-11 83.6 11.2 63 37-101 49-115 (116)
9 cd02899 PLAT_SR Scavenger rece 98.3 4.5E-06 9.7E-11 78.1 9.2 53 35-91 44-98 (109)
10 cd01756 PLAT_repeat PLAT/LH2 d 97.9 0.00013 2.8E-09 69.3 11.8 65 35-102 49-118 (120)
11 cd01753 PLAT_LOX PLAT domain o 97.9 6.3E-05 1.4E-09 70.9 9.5 56 35-93 47-106 (113)
12 cd01757 PLAT_RAB6IP1 PLAT/LH2 97.8 0.00011 2.3E-09 69.5 10.0 55 39-94 42-100 (114)
13 cd01752 PLAT_polycystin PLAT/L 97.6 0.00062 1.3E-08 64.7 10.6 56 37-94 50-109 (120)
14 cd01754 PLAT_plant_stress PLAT 97.5 0.00035 7.5E-09 67.5 7.9 59 34-94 54-119 (129)
15 PF06232 ATS3: Embryo-specific 45.6 91 0.002 30.3 7.5 53 37-92 65-117 (125)
16 KOG2080 Uncharacterized conser 45.0 15 0.00033 45.2 2.6 51 42-93 1015-1069(1295)
17 cd01755 PLAT_lipase PLAT/ LH2 39.9 1.2E+02 0.0027 28.8 7.6 52 36-87 44-105 (120)
18 KOG2675 Adenylate cyclase-asso 29.7 1.4E+02 0.0031 34.6 7.0 109 469-624 91-216 (480)
19 PF10474 DUF2451: Protein of u 27.8 37 0.0008 36.3 2.0 24 584-613 178-201 (234)
20 TIGR03124 ctirate_citX holo-AC 26.9 29 0.00063 35.2 1.0 55 105-176 80-134 (165)
21 PF12588 PSDC: Phophatidylseri 24.5 1E+02 0.0023 30.5 4.3 48 600-648 11-59 (141)
22 PF08153 NGP1NT: NGP1NT (NUC09 20.1 64 0.0014 31.6 1.8 26 732-757 33-60 (130)
No 1
>PLN02305 lipoxygenase
Probab=100.00 E-value=3e-245 Score=2097.39 Aligned_cols=789 Identities=55% Similarity=0.995 Sum_probs=751.9
Q ss_pred EEEeeecCCCCCCc---cccccccccCCCCCCCcEEEEEEEecCCCCCceEEEEEEeCCCCceeeeeEEEccCCCCcEEE
Q 003699 7 FVQINIYSETGAEK---PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNI 83 (802)
Q Consensus 7 ~vs~~~~~~tg~~k---~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgai~v~n~~~~e~fl~~i~v~~~p~~~~~F 83 (802)
|||+++||+||+|| +.|++|+.+ ....++++.|+++|+|+.+||+||||+|+|.|.+||||++|+|+++|+|+|||
T Consensus 121 LvS~~~~~~~g~gk~~~~~l~~~~~~-~~~~~~~~~~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f 199 (918)
T PLN02305 121 LVSEEIDPVTGSGKSVESSVRGWLPK-PSNDPHIVEYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFF 199 (918)
T ss_pred EEeccccCCCCCcccccchhhccccC-CCCCCCceEEEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEE
Confidence 57999999999666 899999976 33226788999999999999999999999999999999999999999999999
Q ss_pred eeccccccCCCCccceEEeeccccCcCCCChhhHHHHHHHHHhhhCCCCCCcccCCeEeeccccCCCCCCCCCCCccccc
Q 003699 84 TCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPV 163 (802)
Q Consensus 84 pc~sWV~~~~~~~~~riff~~~~~LP~~tp~~l~~~R~~EL~~~rg~g~g~r~~~driYd~~~yndlG~p~~~~~l~r~v 163 (802)
+||||||+.++|+.+||||+||+|||++||++|+++|++||++|||||+||||+||||||||+|||||+||++++++|||
T Consensus 200 ~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~Rpv 279 (918)
T PLN02305 200 PANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIKDLRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPV 279 (918)
T ss_pred eccCccccCCCCCCCceEecCCCcCcccCCHHHHHHHHHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCccCCCCCCCCCCCCCCCcCC---CCccCCCCCcChhhhhchhhhhHHHHHhhhhhhhhhhhccCCCCCCC
Q 003699 164 LGGKEHPYPRRCRTGRPPCETDPASESRTL---INYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPY 240 (802)
Q Consensus 164 lgg~~~pyprr~rtgr~~~~~~~~~~~~~~---~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (802)
|||.+|||||||||||+|+++||.+|||.. .+||||||+|++.|.++|.+.++|+++|.++|.|+++++.+..+|+|
T Consensus 280 LGG~~~PYPRR~RTGR~~t~~Dp~~Esr~~~~~~~YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~ 359 (918)
T PLN02305 280 LGGEEWPYPRRCRTGRPPTKKDPLCESRIEKPHPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTC 359 (918)
T ss_pred cCCCCCCCCCcCcCCCCCCCCCCcccccccCCCCcCCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCC
Confidence 999669999999999999999999999954 37999999999999999999999999999999999998878899999
Q ss_pred HHHHHHHhcCCCCCCCchhhhHHHHHhhhhh-hhhccccccCcccccccCcccccccccCccccHHHHHHHhhCCCcccc
Q 003699 241 FTTIDKLFNEGVNVPMPETFKEKALWRTILP-RLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSI 319 (802)
Q Consensus 241 ~~di~~ly~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~P~~~~~~~~~W~~D~~FgrQ~LaG~NP~~I 319 (802)
|+||.+||.+|+++|... .+.+.+..+| .+.+.+.++++.+||||+|++|++|+++|++|+|||||+|||+||++|
T Consensus 360 f~~i~~Ly~~g~~l~~~~---~~~~~~~p~~~~~~~~i~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I 436 (918)
T PLN02305 360 FSDIDKLYNDGILLKTEE---PKDIGLNPFLGNFMKQVLSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNI 436 (918)
T ss_pred HHHHHHHhccCCcCCchh---hhhhhcCCchHHHHHHhhhcccccccCCCcceeecccccccChHHHHHHHHcCCCChhe
Confidence 999999999999998410 0122222232 444444778899999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCcCCCCCCcccHHHHHHhhCCcccHHHHHhcCcEEEecccccccchhhhcccCCCceecccceeEe
Q 003699 320 RLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFF 399 (802)
Q Consensus 320 ~r~~~~P~~~~ld~~~~g~~~~~vt~e~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~yA~~~Lff 399 (802)
+||++||++|+|||++||+++|+||++||+..|+| +||++||++|||||+||||++|||+.++|.++++++|||+||||
T Consensus 437 ~rl~efP~~skldp~~yG~~~s~iT~e~ve~~L~G-~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLff 515 (918)
T PLN02305 437 EILKEFPILSKLDPAVYGPPESALTEELIERELEG-MTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFF 515 (918)
T ss_pred eeccccCCccccCccccCCcCCCcCHHHHHhhcCC-CcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEE
Confidence 99999999999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred ecCCCceeeEEEEecCCCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccchhHHHHHhhccC
Q 003699 400 SYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQL 479 (802)
Q Consensus 400 l~~~g~L~PiAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~vAt~RqL 479 (802)
++++|+|+||||||+++++++++.+++||||.++++++|.|+||||||++||+++||+|+||++||++||||||||+|||
T Consensus 516 L~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqL 595 (918)
T PLN02305 516 YSKAGALRPIAIELSLPPTPSSPGNKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQL 595 (918)
T ss_pred ECCCCCEeeEEEEeeCCCCCCCCCcceeeCCCCCCCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccC
Confidence 99999999999999999877666678899997766788999999999999999999999999999999999999999999
Q ss_pred CccCchhhccccchhhhhhchHHHHhhcccCCcccccccCCchhHHHHHHHHHhccCCCCCCCCchHHHhCCCCCCCCCC
Q 003699 480 SAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSA 559 (802)
Q Consensus 480 s~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~d~~~ 559 (802)
|.+|||||||.||||+||+||++||++||++||++|++|++|+++++|++.+|++.|+|++++||+||++|||+++|+++
T Consensus 596 s~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~ 675 (918)
T PLN02305 596 SAMHPIYKLLHPHMRYTLEINALARQSLINGGGIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSM 675 (918)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCceeeeeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred CccccccccCCccchhhHHHHHHHHHHHHhhcccccccccCccCCHHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHH
Q 003699 560 PRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLID 639 (802)
Q Consensus 560 ~~g~~~~lp~YpYrdDgl~iW~AI~~fV~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~i~t~~~Lv~ 639 (802)
|||+++.|||||||||||+||+||++||++||++||++|++|++|.|||+||+||++.||+|+++.+|||+|+|+++||+
T Consensus 676 p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~ 755 (918)
T PLN02305 676 PCGVRLVIEDYPYAADGLLIWSAIKEWVESYVDHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSG 755 (918)
T ss_pred cccccccCCCCchhhhhHHHHHHHHHHHHHHHHhhCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhheeccccccccccccccccccccCCcccccCCCCCCCCCCchhHHhhhcCcHHHHHhcCCChHHHHHHHHHHHhhc
Q 003699 640 IITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLS 719 (802)
Q Consensus 640 ~lT~iIf~aS~qHAAVNfgQ~~~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS 719 (802)
+||+|||+|||||||||||||+|+||+||+|++||+|||++ +..++++|+.+||+++|++||++.||+.+|+++++||
T Consensus 756 ~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~~~Rrp~P~~--~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS 833 (918)
T PLN02305 756 ILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLMRKLIPQE--NDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLS 833 (918)
T ss_pred HHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCCCCCC--CCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999987 6678999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCccCCceeecCCCCCCCCcCCCC
Q 003699 720 SHSPDEEYLGKQMEQ--AWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVP 797 (802)
Q Consensus 720 ~~~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~k~r~~~~~~PY~yL~Ps~~~g~t~~~Ip 797 (802)
+|++||+|||++.+. .|+.|+++++|+++|+++|++||++|++||++++||||+||+++||+||+|+++|||||||||
T Consensus 834 ~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P~s~~G~T~rgIP 913 (918)
T PLN02305 834 THSPDEEYLGELRHLHSHWINDHEVVKLFNKFSARLEEIEKTINERNKDIRLKNRNGAGIPPYELLLPTSGPGVTGRGIP 913 (918)
T ss_pred cCCCCcccccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCCCCCCCCcCCCC
Confidence 999999999999875 699999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccC
Q 003699 798 YSISI 802 (802)
Q Consensus 798 nSisI 802 (802)
|||||
T Consensus 914 NSISI 918 (918)
T PLN02305 914 NSISI 918 (918)
T ss_pred CcccC
Confidence 99998
No 2
>PLN02264 lipoxygenase
Probab=100.00 E-value=1.5e-243 Score=2083.33 Aligned_cols=787 Identities=50% Similarity=0.941 Sum_probs=749.6
Q ss_pred EEEeeecCCCCCCc----cccccccccCCCCCCCcEEEEEEEecCCCCCceEEEEEEeCCCCceeeeeEEEccCCCCcEE
Q 003699 7 FVQINIYSETGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVN 82 (802)
Q Consensus 7 ~vs~~~~~~tg~~k----~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgai~v~n~~~~e~fl~~i~v~~~p~~~~~ 82 (802)
|||+++||+||+|| +.|++|+++ ....+++++|+++|+|+++||+||||+|+|.|.+||||++|+|+++|+|+||
T Consensus 124 LVSs~~~~~tg~~~~~~~a~l~~~~~~-~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~~itle~~p~g~v~ 202 (919)
T PLN02264 124 LISTQVDPKTKEPKKSKAAVLKDWSKK-SNIKAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVH 202 (919)
T ss_pred EEeccccCCCCCccCCCcchhcccccC-CCCCCCceEEEEEEEeccccCCcceEEEEeCCCceEEEEEEEeccCCCCcEE
Confidence 57999999999544 999999976 4435788899999999999999999999999999999999999989999999
Q ss_pred EeeccccccCCCCccceEEeeccccCcCCCChhhHHHHHHHHHhhhCCCCCCcccCCeEeeccccCCCCCCCCCCCcccc
Q 003699 83 ITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARP 162 (802)
Q Consensus 83 Fpc~sWV~~~~~~~~~riff~~~~~LP~~tp~~l~~~R~~EL~~~rg~g~g~r~~~driYd~~~yndlG~p~~~~~l~r~ 162 (802)
|+||||||+.++|+++||||+||+|||++||++|+++|++||++|||||+||||+||||||||+|||||+||++++++||
T Consensus 203 F~cnSWV~p~~~~~~~RiFF~Nk~YLP~~tP~~l~~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~Rp 282 (919)
T PLN02264 203 FPCNSWVQSQKDHPGKRIFFTNQPYLPSETPAGLRALREKELRNLRGDGKGVRKLSDRIYDFDVYNDLGNPDKSRELARP 282 (919)
T ss_pred EecCCccccCcCCCCCceEecCCCcCcccCCHHHHHHHHHHHHHhcCCCCCcCCcccchhhhhhhccCCCCCCCccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCccCCCCCCCCCCCCCCCcCC---CCccCCCCCcChhhhhchhhhhHHHHHhhhhhhhhhhhccCCCCCC
Q 003699 163 VLGGKEHPYPRRCRTGRPPCETDPASESRTL---INYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFP 239 (802)
Q Consensus 163 vlgg~~~pyprr~rtgr~~~~~~~~~~~~~~---~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (802)
||||.+|||||||||||+|+++||.+|||.. .+||||||+|++.|.++|.+.++|+++|.++|.++++++.+ +|+
T Consensus 283 vLGG~~~PYPRR~RTGR~~t~~dp~~Esr~~~~~~iYvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~--~F~ 360 (919)
T PLN02264 283 TLGGKKIPYPRRCRTGRLPTDSDMMAESRVEKPLPMYVPRDEQFEESKQDTFAAGRLKAVLHNLIPSLKASILAE--DFA 360 (919)
T ss_pred ccCCCCCCCCCCCcCCCCCCCCCCcccccccCCCceeCCCCCCcccchhhhHHHHHHHHHHHHhhhhhhhhcCCC--CCC
Confidence 9999779999999999999999999999954 36999999999999999999999999999999999988753 999
Q ss_pred CHHHHHHHhcCCCCCCCchhhhHHHHHhhh-hhhhhccccccCcccccccCcccccccccCccccHHHHHHHhhCCCccc
Q 003699 240 YFTTIDKLFNEGVNVPMPETFKEKALWRTI-LPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYS 318 (802)
Q Consensus 240 ~~~di~~ly~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~P~~~~~~~~~W~~D~~FgrQ~LaG~NP~~ 318 (802)
||+||.+||.+|+++|... .+...+.+ +|.+.+.+.++++.+||||+|++|++|+++|++|+|||||+|||+||++
T Consensus 361 ~f~~i~~Ly~~g~~l~~~~---~~~~~~~~p~~~~~~~~~~~~~~~lkf~~P~vi~~d~~~W~~DeeFarQ~LaGvNP~~ 437 (919)
T PLN02264 361 NFGEIDSLYKEGLLLKLGF---QDDIFKKFPLPKVVTTLQESSEGLLKYDTPKILSKDKFAWLRDDEFARQAIAGINPVN 437 (919)
T ss_pred CHHHHHHHHhcCCcCCcch---hhhHhhcCChHHHHHHhhhcccccccCCCCceeecChhhccCHHHHHHHHHcCCCchh
Confidence 9999999999999988410 11222333 4355555577889999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCcCCCCCCcccHHHHHHhhCCcccHHHHHhcCcEEEecccccccchhhhcccCCCceecccceeE
Q 003699 319 IRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLF 398 (802)
Q Consensus 319 I~r~~~~P~~~~ld~~~~g~~~~~vt~e~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~yA~~~Lf 398 (802)
|+||++||++|+||++.||+++|+||++||+..|+| +||++||++|||||+||||++||+++++|.++++++|||+|||
T Consensus 438 I~rl~e~P~~s~ld~~~yg~~~s~it~e~v~~~L~G-~Tl~eAl~~~rLFilDy~d~~lp~l~~in~~~g~~~YAprtLF 516 (919)
T PLN02264 438 IERVKVFPPVSNLDPEIYGPQHSALTEDHIIGHLDG-LSVQQALEENRLFMVDYHDIYLPFLDRINALDGRKAYATRTIF 516 (919)
T ss_pred hhhhhhcCCCCCCCHhhcCCccchhhHHHHhhccCC-CcHHHHHHcCCEEEEeChhhhhhhhhhhccCCCcEeEcceEEE
Confidence 999999999999999999999999999999999998 9999999999999999999999999999999999999999999
Q ss_pred eecCCCceeeEEEEecCCCCCCCCCCceeeeCCCCCCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccchhHHHHHhhcc
Q 003699 399 FSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQ 478 (802)
Q Consensus 399 fl~~~g~L~PiAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~vAt~Rq 478 (802)
|++++|+|+||||||+++++++++.+++||||+++++++|.|+||||||++||+++||+|+||++||++||||||||+||
T Consensus 517 fL~~dG~L~PlAIqL~~p~~~~~~~~~~VftP~~d~~~~w~W~LAK~~V~~aD~~~HQlisHllrTHlv~EpfiIAt~Rq 596 (919)
T PLN02264 517 FLTRLGTLKPIAIELSLPPSGPNSRSKRVVTPPVDATSNWMWQLAKAHVCSNDAGVHQLVNHWLRTHACLEPFILAAHRQ 596 (919)
T ss_pred EECCCCCEeeEEEEecCCCCCCCcCcceeECCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhhhhccc
Confidence 99999999999999999986655567899999766678899999999999999999999999999999999999999999
Q ss_pred CCccCchhhccccchhhhhhchHHHHhhcccCCcccccccCCchhHHHHHHHHHhccCCCCCCCCchHHHhCCCCCCCCC
Q 003699 479 LSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPS 558 (802)
Q Consensus 479 Ls~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~d~~ 558 (802)
||.+|||||||.||||+||+||++||+.||++||++|++|++|.++++|++.+|++.|+|++++||+||++|||+++|++
T Consensus 597 Ls~~HPI~kLL~PHfr~TL~INalAR~~LIn~gGiid~~f~pg~~~~elss~aYk~~W~F~~~~LP~DL~~RGv~~~D~~ 676 (919)
T PLN02264 597 LSAMHPIFKLLDPHMRYTLEINALARQTLISADGVIESCFTAGQYGMEISAAAYKNSWRFDMEGLPADLIRRGMAVPDPT 676 (919)
T ss_pred CCccCcHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeeccchhHHHHHHHHHHhccCCccccCHHHHHHcCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999997799999999999999999999999
Q ss_pred CCccccccccCCccchhhHHHHHHHHHHHHhhcccccccccCccCCHHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHH
Q 003699 559 APRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLI 638 (802)
Q Consensus 559 ~~~g~~~~lp~YpYrdDgl~iW~AI~~fV~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~i~t~~~Lv 638 (802)
+|||+++.|||||||||||+||+||++||++||++||++|++|++|.|||+||+||++.||+++++.+|||+|+|+++||
T Consensus 677 ~phgl~l~ipdYPYrdDGL~iW~AIk~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~~d~~~~p~l~T~~eLi 756 (919)
T PLN02264 677 QPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPDPSLICTDKELQAWYSESINVGHADLRDADWWPKLSTVDDLV 756 (919)
T ss_pred cccchhhccCCCcchhhHHHHHHHHHHHHHHHHHHhCCChhhhcCCHHHHHHHHHHHhccCCCCcCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhheeccccccccccccccccccccCCcccccCCCCCCCCCCchhHHhhhcCcHHHHHhcCCChHHHHHHHHHHHhh
Q 003699 639 DIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTL 718 (802)
Q Consensus 639 ~~lT~iIf~aS~qHAAVNfgQ~~~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~L 718 (802)
++||+|||+||+||||||||||+|+||+||+|++||+|||++ |++++++|+.+|++++|++||++.||+.+|+++++|
T Consensus 757 ~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~rrp~P~~--~~~e~~~~~~~pe~~~L~tlP~~~qt~~~ms~~~iL 834 (919)
T PLN02264 757 SILTTLIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLIPDE--SDPEYASFLADPQKYYFSSMPSLLQTTKFMAVVDTL 834 (919)
T ss_pred HHHHHHHHhhhhhhhhhhcCcccccccCCCCChHhcCCCCCC--CChhhhhhhcChHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987 568899999999999999999999999999999999
Q ss_pred cCCCCCCccccccCCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCccCCceeecCCCCCCCCcCCCC
Q 003699 719 SSHSPDEEYLGKQMEQ-AWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVP 797 (802)
Q Consensus 719 S~~~~de~yLG~~~~~-~~~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~k~r~~~~~~PY~yL~Ps~~~g~t~~~Ip 797 (802)
|+|++||+|||++..+ .|+.|+++++|+++|+++|++||++|++||+++.||||+||+++||+||+|+++|||||||||
T Consensus 835 S~hs~dE~yLG~~~~~~~w~~D~~~~~af~rF~~~L~eIe~~I~~RN~~~~~knR~G~~~~PY~lL~P~s~~G~T~~gIP 914 (919)
T PLN02264 835 STHSPDEEYIGERQQPSIWTGDAEIVEAFYGFSAEIGRIEKEIEKRNADPSRRNRCGAGVLPYELLAPSSEPGVTCRGVP 914 (919)
T ss_pred hhcCCCceeccCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCCCCceeeCCCCCCCCCcCCCC
Confidence 9999999999998765 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccC
Q 003699 798 YSISI 802 (802)
Q Consensus 798 nSisI 802 (802)
|||||
T Consensus 915 NSISI 919 (919)
T PLN02264 915 NSVSI 919 (919)
T ss_pred CcccC
Confidence 99998
No 3
>PLN02337 lipoxygenase
Probab=100.00 E-value=1.8e-239 Score=2057.97 Aligned_cols=794 Identities=47% Similarity=0.832 Sum_probs=749.8
Q ss_pred CCceE---EEEeeecC-CCC-CCc----cccccccccCCCCCCCcEEEEEEEecCCCCCceEEEEEEeCCCCceeeeeEE
Q 003699 2 TANTY---FVQINIYS-ETG-AEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIV 72 (802)
Q Consensus 2 ~~~~~---~vs~~~~~-~tg-~~k----~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgai~v~n~~~~e~fl~~i~ 72 (802)
+|+++ |||+++|| +|| +|| ++|++|+++.....+++++|+|+|+|+++||+||||+|+|.|.+||||++|+
T Consensus 50 ~G~~v~lqLvS~~~~~p~~g~~gk~~k~a~l~~w~~~~~~~~~~~~~y~~~F~~~~~fG~pGAi~V~N~h~~EffL~sit 129 (866)
T PLN02337 50 LGKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLTAGESAFKVTFDWDEKIGVPGAFIIKNNHHSEFYLKTVT 129 (866)
T ss_pred cCCeEEEEEEeccccccccCCccccCCccchhhhccCCCCCCCCceEEEEEEEecccCCCcceEEEEecCCceEEEEEEE
Confidence 45555 56999886 888 443 8999999775554578889999999999999999999999999999999999
Q ss_pred EccCCC-CcEEEeeccccccCCCCccceEEeeccccCcCCCChhhHHHHHHHHHhhhCCCCCCcccCCeEeeccccCCCC
Q 003699 73 LDGPRN-GPVNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLG 151 (802)
Q Consensus 73 v~~~p~-~~~~Fpc~sWV~~~~~~~~~riff~~~~~LP~~tp~~l~~~R~~EL~~~rg~g~g~r~~~driYd~~~yndlG 151 (802)
|+++|+ |+|||+||||||+.++++.+||||+||+|||++||++|+++|++||++|||||+||||+||||||||+|||||
T Consensus 130 le~~p~~g~v~f~cnSWV~~~~~~~~~RiFF~nk~ylp~~tP~~l~~~R~~eL~~lrG~g~gerk~~dRiYdyd~YnDlg 209 (866)
T PLN02337 130 LEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQTPAPLRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLG 209 (866)
T ss_pred EecCCCCCcEEEecCCccccCCCCCCCceEecCCCcCcccccHHHHHHHHHHHHHhcCCCCCCCCcccchhhhhhhccCC
Confidence 998995 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCC-CCCCCCCccCCCCCCCCCCCCCCCcCC----CCccCCCCCcChhhhhchhhhhHHHHHhhhhhh
Q 003699 152 VPDFCSELARPVLGG-KEHPYPRRCRTGRPPCETDPASESRTL----INYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPS 226 (802)
Q Consensus 152 ~p~~~~~l~r~vlgg-~~~pyprr~rtgr~~~~~~~~~~~~~~----~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~~~ 226 (802)
+||++++++|||||| ++|||||||||||+|+++||.+|||.. .+||||||+|++.|.++|.+.++|+++|.++|.
T Consensus 210 ~pd~~~~~~RpvLGg~~~~pyPRR~rTgr~~t~~dp~~esr~~~~~~~~yvPrDE~f~~~k~~~f~~~~l~~~~~~~~p~ 289 (866)
T PLN02337 210 DPDKGNPYARPVLGGSQEYPYPRRGRTGRKPTKTDPNSESRLPLLSLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPE 289 (866)
T ss_pred CCCCCccccCccCCCCCCCCCCCcccCCCCCCCCCCccccccccCCCCcccCCCCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 679999999999999999999999953 469999999999999999999999999999999
Q ss_pred hhhhhccCCCCCCCHHHHHHHhcCCCCCCCchhhhHHHHHhhh-hhhhhccccccCcccccccCcccccccccCccccHH
Q 003699 227 LETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTI-LPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEE 305 (802)
Q Consensus 227 ~~~~~~~~~~~~~~~~di~~ly~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~P~~~~~~~~~W~~D~~ 305 (802)
|+++++.+..+|++|+||.+||.+|+++|..+. .+.+.+.+ ++.+.+.+.++++.++|||+|+|+++|+++|++|++
T Consensus 290 ~~~~~~~~~~~f~~f~~i~~ly~~g~~lp~~~~--~~~~~~~~p~~~~~~~~~~~~~~~l~fp~P~vi~~d~~~W~~Dee 367 (866)
T PLN02337 290 LEALFDKTPNEFDSFEDVLKLYEGGIKLPNGPL--LEELRKNIPLEMLKELLRTDGEYLLKFPMPQVIKEDKSAWRTDEE 367 (866)
T ss_pred HHHHhCCCCCCCCCHHHHHHHhhcCCCCCCchH--HHHhhhcChHHHHHHHHhhcccccccCCCCceeecccccccCHHH
Confidence 999988788999999999999999999984211 01222212 334666777888999999999999999999999999
Q ss_pred HHHHHhhCCCccccccccCCCCCCCCCCCcCCCCCCcccHHHHHHhhCCcccHHHHHhcCcEEEecccccccchhhhccc
Q 003699 306 FGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRE 385 (802)
Q Consensus 306 FgrQ~LaG~NP~~I~r~~~~P~~~~ld~~~~g~~~~~vt~e~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~ 385 (802)
||||+|||+||++|+||++||++|+|||++||+++|+||++||+..|+| +||++||++|||||+||||.+|||+.++|.
T Consensus 368 FarQ~LaG~NP~~I~rl~~~P~~~~ld~~~yg~~~s~iT~e~v~~~L~g-~Tl~eAl~~~rLfi~Dy~d~~lp~l~~in~ 446 (866)
T PLN02337 368 FAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEEHIEKNLEG-LTVQEALEKNRLFILDHHDALMPYLRRINS 446 (866)
T ss_pred HHHHHhcCCCChheeecccCCCcccCChhhcCCccCccCHHHHHhccCC-ccHHHHHHcCCEEEEecchhcCcccccccC
Confidence 9999999999999999999999999999999999999999999999998 999999999999999999988999988998
Q ss_pred CCCceecccceeEeecCCCceeeEEEEecCCCCCCC--CCCceeeeCCCCCCCchHHHHHHHHHHhhhhhhhhhhhhhhh
Q 003699 386 LKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGK--PQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLR 463 (802)
Q Consensus 386 ~~g~~~yA~~~Lffl~~~g~L~PiAIqL~~~~~~~~--~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHll~ 463 (802)
..++ .|||+||||++++|+|+||||||++++..++ +..++||||+++++++|.|+||||||++||+++||+|+||++
T Consensus 447 ~~~k-~yA~~tLffl~~dG~L~PlAIqL~~p~~~~~~~g~~~~VfTP~~~~~~~~~W~lAK~~v~~aD~~~HqlisHllr 525 (866)
T PLN02337 447 TSTK-TYATRTLLFLKDDGTLKPLAIELSLPHPQGDKFGAVSKVYTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHWLN 525 (866)
T ss_pred CCCc-cccceeEEEECCCCCEeEEEEEeccCCCCcccCCCCCCeECCCCCCCCcchHHHHHHHHHHhhHHHHHHHHHHhh
Confidence 6555 9999999999999999999999998754322 346999999976667899999999999999999999999999
Q ss_pred cccchhHHHHHhhccCCccCchhhccccchhhhhhchHHHHhhcccCCcccccccCCchhHHHHHHHHHhccCCCCCCCC
Q 003699 464 THCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEAL 543 (802)
Q Consensus 464 THlv~Epf~vAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~l 543 (802)
||+++|||||||+||||.+||||+||.||||+||+||++||+.||++||++|+++++|+++++|++++|++ |+|++++|
T Consensus 526 THlv~EpfiIAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiid~~~~~g~~~~els~~~yk~-w~F~~~~L 604 (866)
T PLN02337 526 THAVIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGILESTVFPGKYALEMSSVVYKN-WNFTEQAL 604 (866)
T ss_pred hhhhHHHHHHHHhccCCCcCcHHHHHHHHHHHHHHHHHHHHHheeCCCCeeeeeeccchhHHHHHHHHHhc-CCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred chHHHhCCCCCCCCCCCccccccccCCccchhhHHHHHHHHHHHHhhcccccccccCccCCHHHHHHHHHHHhccCCCCC
Q 003699 544 PKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKK 623 (802)
Q Consensus 544 P~dL~~RG~~~~d~~~~~g~~~~lp~YpYrdDgl~iW~AI~~fV~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~ 623 (802)
|+||++|||+++|+++|||+++.|||||||||||+||+||++||++||++||++|++|++|.|||+||+||++.||++++
T Consensus 605 P~DL~~RGv~~~D~~~p~g~~l~i~dYPYrdDGL~iW~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~k 684 (866)
T PLN02337 605 PADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSAIETWVKEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLK 684 (866)
T ss_pred HHHHHHcCCCccccccccccccccCCCcchhhHHHHHHHHHHHHHHHHHhhCCchHhhccCHHHHHHHHHHHhcCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHhhheeccccccccccccccccccccCCcccccCCCCCCCCCCchhHHhhhcCcHHHHHhcCC
Q 003699 624 DEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFP 703 (802)
Q Consensus 624 ~~~g~p~i~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP 703 (802)
+.+|||+|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++ |+.++.+|..+|++++|++||
T Consensus 685 ~~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy~y~gfvPN~P~~~r~~~P~~--~~~e~~~l~~~~e~~~L~tlp 762 (866)
T PLN02337 685 DEPWWPKMQTVAELIESCTIIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEP--GTPEYEELEKNPDKAFLKTIT 762 (866)
T ss_pred CCCCCCccCCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCchhhcCCCCCC--CchhhhhhccCcHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999999999975 788899999999999999999
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCccCCceee
Q 003699 704 SQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELM 783 (802)
Q Consensus 704 ~~~~a~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~~~k~r~~~~~~PY~yL 783 (802)
++.||+.+|+++++||.|+.||+|||+|++..|+.|+++++|+++|+++|++||++|++||+++.+|||+||+++||+||
T Consensus 763 ~~~qt~~~~~l~~lLS~~s~de~yLG~~~~~~w~~d~~~~~a~~~F~~~L~eIe~~I~~RN~~~~~knr~G~~~~PY~lL 842 (866)
T PLN02337 763 AQLQTLLGISLIEILSRHSSDEVYLGQRDTPEWTSDAEPLEAFKRFGERLVEIENRIVDMNKDPRLKNRVGPVKMPYTLL 842 (866)
T ss_pred CHHHHHHHHHHHHHhccCCCCceeccCcCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcccCCCCCCceee
Confidence 99999999999999999999999999999779999999999999999999999999999999999999999999999999
Q ss_pred cCCC-----CCCCCcCCCCccccC
Q 003699 784 KPFS-----EPGVTGQGVPYSISI 802 (802)
Q Consensus 784 ~Ps~-----~~g~t~~~IpnSisI 802 (802)
+|++ +||||||||||||||
T Consensus 843 ~P~~~~~~~~~g~t~~gIPNSISI 866 (866)
T PLN02337 843 YPNTSDYTGEGGLTGKGIPNSVSI 866 (866)
T ss_pred CCCCccccCCCCcccCCCCCcccC
Confidence 9999 899999999999998
No 4
>PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents the C-terminal region of these proteins.; GO: 0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 2P0M_A 3RDE_B 2IUJ_A 1RRL_B 1JNQ_A ....
Probab=100.00 E-value=2.4e-196 Score=1698.39 Aligned_cols=663 Identities=58% Similarity=0.989 Sum_probs=573.7
Q ss_pred ChhhHHHHHHHHHhhhCCCCCCcccCCeEeeccccCCCCCCCCCCCcccccCCC-CCCCCCCccCCCCCCCCCCCCCCCc
Q 003699 113 PNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGG-KEHPYPRRCRTGRPPCETDPASESR 191 (802)
Q Consensus 113 p~~l~~~R~~EL~~~rg~g~g~r~~~driYd~~~yndlG~p~~~~~l~r~vlgg-~~~pyprr~rtgr~~~~~~~~~~~~ 191 (802)
|.+|+++|++||++|||||+||||+||||||||||||||+||++++++|||||| ++|||||||||||+|+++||.+|+|
T Consensus 1 ~~~l~~~R~~eL~~lrG~g~gerk~~dRiYdYd~YnDLG~pd~~~~~~RpvlGgs~~~PYPRR~RTGr~~~~~Dp~sEsr 80 (667)
T PF00305_consen 1 PAGLKKLREEELKNLRGDGTGERKEWDRIYDYDVYNDLGNPDKGPELARPVLGGSKEFPYPRRCRTGRPPTKTDPKSESR 80 (667)
T ss_dssp SGGGHHHHHHHHHHHHTTS-S---TT-----EE-B-SSSBGGGTGCG----BSSSSSS----EE----SBESSCTTSBGC
T ss_pred ChHHHHHHHHHHHHhcCCCCCccccccceeeeecccCCCCCCCCCcCCCCCCCCCCCCCCCccCCCCCCCCCCCccccCc
Confidence 789999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred CCCCccCCCCCcChhhhhchhhhhHHHHHhhhhhhhhhhhccCCCCCCCHHHHHHHhcCCCCCCCchhhhHHHHHhhh-h
Q 003699 192 TLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTI-L 270 (802)
Q Consensus 192 ~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~ly~~~~~~~~~~~~~~~~~~~~~-~ 270 (802)
...+||||||+|++.|+.+|.++++||++|.++|.|++++..+..+|+||+||++||++|++++. +...+.. +
T Consensus 81 ~~~~YVPRDE~F~~~K~~dF~~~~lks~~~~llP~L~~~~~~~~~eF~sF~dId~LY~~g~~l~~------~~~~~~~~~ 154 (667)
T PF00305_consen 81 SGDIYVPRDERFSEVKQSDFLANALKSLLHALLPALKSLFDDTPNEFDSFEDIDDLYEEGIKLPT------DLLKKLIPL 154 (667)
T ss_dssp -SSGGS-GGGS-SCSSGGGHHHHHHHHHHHTHHHHHHHHTTSSTSSCSSHHHHHHHHTTTEE--H------HHHCCHTTS
T ss_pred cccccCCccccccchhHHHHHHHHHHHHHHhHHHHHHHHhcccCcccCCHHHHHHHHhccccchh------hHhhhcCcH
Confidence 88999999999999999999999999999999999999877778999999999999999988872 1222222 3
Q ss_pred hhhhccccccCcccccccCcccccccccCccccHHHHHHHhhCCCccccccccCCCCCCCCCCCcCCCCCCcccHHHHHH
Q 003699 271 PRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEK 350 (802)
Q Consensus 271 ~~~~~~~~~~~~~~~~~p~P~~~~~~~~~W~~D~~FgrQ~LaG~NP~~I~r~~~~P~~~~ld~~~~g~~~~~vt~e~i~~ 350 (802)
+.+.+.+.+++++++|||+|++++.++++|++|++||||+|||+||++|+||+++|++++||+++||+++++||++||+.
T Consensus 155 ~~~~~~~~~~~~~~~kf~~p~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~~~ld~~~yg~~~s~it~e~i~~ 234 (667)
T PF00305_consen 155 ELLKELFRTDGENILKFPTPQVIERDRFAWRTDEEFARQRLAGVNPVVIRRLTEFPPKSKLDPAIYGDQESPITDEHIEP 234 (667)
T ss_dssp TTCCTTSBETSSSEEB----HHHHCHHHHTTSHHHHHHHHHHSSSTTSEEE-SSSSTTS-SSHHCCTSSB-STTHHHHHH
T ss_pred HHHHHHHhhcccceeeCCCCccchhhhhccCChHHHHHHHHcCCCchHhhccccCCccccccHhhcCCccCCchHHHhhh
Confidence 45677777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCcccHHHHHhcCcEEEecccccccchhhhcccCCCceecccceeEeecCCCceeeEEEEecCCCCCCCCCCceeeeC
Q 003699 351 EIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTP 430 (802)
Q Consensus 351 ~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~yA~~~Lffl~~~g~L~PiAIqL~~~~~~~~~~~~~VftP 430 (802)
.|+| +||++||++|||||+||+++++|+++++|. .+++.|||+||||++++|+|+||||||+++...+.++.++||||
T Consensus 235 ~l~g-~tl~~al~~~rLfi~Dy~~~~~~~~~~i~~-~~~~~~A~~~Lf~l~~~g~L~PlAIqL~~p~~~~~~~~~~v~tP 312 (667)
T PF00305_consen 235 QLEG-LTLEEALKDGRLFILDYHDLFGPYLNKINE-KGRYAYAPRALFFLNPDGTLKPLAIQLSQPGPEGPPQFNPVFTP 312 (667)
T ss_dssp HCHC-S-HHHHHHTT-EEEEEEGGGTTHHHHHHTT-CCGBG-EEEEEEEEETTSEEEEEEEECSECBTTCS-EEEEEE-T
T ss_pred ccCC-CcHHHHHhcCCeEEEeehhhcccccccccc-CCcEeccceeEEEEcCCCCEeeeEEeccCCCCcccCccceeeec
Confidence 9999 999999999999999999999999999988 78899999999999999999999999988754433456899999
Q ss_pred CCCCCCchHHHHHHHHHHhhhhhhhhhhhhhhhcccchhHHHHHhhccCCccCchhhccccchhhhhhchHHHHhhcccC
Q 003699 431 SWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNA 510 (802)
Q Consensus 431 ~d~~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~vAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~ 510 (802)
+++++.+|.|+||||||++||+++||+|+||++||+|||||||||+||||.+||||+||.|||++||+||++||.+||++
T Consensus 313 ~~d~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Ep~~vAt~R~Ls~~HPi~kLL~PH~r~tl~IN~~Ar~~Li~~ 392 (667)
T PF00305_consen 313 SDDGTEDWLWLLAKAHVQVADANYHQLISHLLRTHLVMEPFIVATHRQLSEMHPIYKLLHPHFRYTLAINALARQSLINA 392 (667)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHS-TTSHHHHHHGGGGTTHHHHHHHHHHHTSST
T ss_pred CCCCccchHHHHHHHHHHhhhHHHHHHHhhhhhhhhhhHHHHHHHhcCCCCCCCceeeccceeecchhhhHHHHHHhhcc
Confidence 95545678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCCchhHHHHHHHHHhccCCCCCCCCchHHHhCCCCCCCCCCCccccccccCCccchhhHHHHHHHHHHHHhh
Q 003699 511 GGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDF 590 (802)
Q Consensus 511 gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~d~~~~~g~~~~lp~YpYrdDgl~iW~AI~~fV~~y 590 (802)
||+||++|++|.++++|++++|++ |+|++++||+||++|||+++|++++||+++.||+||||+|||+||+||++||++|
T Consensus 393 gG~id~~~~~g~~~~~l~~~~y~~-~~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpY~dDgl~iW~aI~~~V~~~ 471 (667)
T PF00305_consen 393 GGIIDKTFSPGKYGMELSSRAYKN-WRFDDQALPADLKKRGMAVDDPSSPHGLRLVLPDYPYRDDGLLIWDAIKKFVSDY 471 (667)
T ss_dssp TSHHHHHSTTTTTHHHHHHHHHTT---GGGGSHHHHHHHTTSEEE-TTSTTSEETTSTT-HHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccchhhHHHHHHHHHHhh-CCcccccCHHHHHhhcccccccccccccccccccCChhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCccCCHHHHHHHHHHHhccCCCCCCCCCCCCCCChhHHHHHHhhheeccccccccccccccccccccCCcc
Q 003699 591 VNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRP 670 (802)
Q Consensus 591 v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~i~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~~~~gf~PN~P 670 (802)
|++||++|++|++|.|||+||+||+++||+++++.++|++|+|+++||++||+|||+||+||||||||||+|+||+||+|
T Consensus 472 v~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~~~i~t~~~Li~~lT~iI~~~S~qHaAVNfgQ~~y~g~~PN~P 551 (667)
T PF00305_consen 472 VNLYYKSDEAVANDTELQAWWNEIRTVGHGDKKDEGFPPKIKTRDELIDILTTIIFTASAQHAAVNFGQYDYYGFVPNRP 551 (667)
T ss_dssp HHHHSSSHHHHHT-HHHHHHHHHHHHTTTTGGTTGTTSSSSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGS-
T ss_pred hhhhcCCcceeCcCHHHHHHHHHHhcccccCcCcCCCCCCCCCHHHHHHHHHHHeeecchhhhhhcccccceeeecCCCC
Confidence 99999999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCchh--HHhhhcCcHHHHHhcCCChHHHHHHHHHHHhhcCCCCCCccccccCCCCCCCcHHHHHHHHH
Q 003699 671 TVARTKMPIEDPSDED--WKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFER 748 (802)
Q Consensus 671 ~~lr~p~P~~~kg~~~--~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~ 748 (802)
++||+++|.+ +..+ +++++.+||+++|++||++.||+.+|+++++||+|++||+|||+|++.+|+.|+++++|+++
T Consensus 552 ~~~r~~~P~~--~~~~~~~~~l~~~~e~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~Lg~~~~~~w~~d~~~~~a~~~ 629 (667)
T PF00305_consen 552 TALRRPMPPP--TTKEVTYEELLKDPEKDFLSTLPSKQQALLQMAVLELLSRHSPDEEYLGQYPEPHWFSDPEAKAAFER 629 (667)
T ss_dssp S-BSSSS--T--SSSH--HHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHTCB-TT--BTTT-SSTTSSSSHHHHHHHHH
T ss_pred hhhcccCCCC--CcchhhhhhhccChHHHHHHhcCCHHHHHHHHHHHHHhccCCCCcccccCcCcccccccHHHHHHHHH
Confidence 9999888876 4444 88999999999999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccccCCCccCCceeecCC
Q 003699 749 FSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPF 786 (802)
Q Consensus 749 F~~~L~~ie~~I~~RN~~~~~k~r~~~~~~PY~yL~Ps 786 (802)
|+++|++||++|++||+++.+|||+|+|++||+||+||
T Consensus 630 F~~~L~~ie~~I~~RN~~~~~~nr~g~~~~PY~~L~Ps 667 (667)
T PF00305_consen 630 FQEELKEIEEEIDERNKDRKLKNRNGPGKVPYTYLLPS 667 (667)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSGGGTTTTT----TTSST
T ss_pred HHHHHHHHHHHHHHHhCCccccccCCCCCCCccccCCC
Confidence 99999999999999999999999999999999999997
No 5
>cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins. Lipoxygenases are nonheme, nonsulfur iron dioxygenases that act on lipid substrates containing one or more (Z,Z)-1,4-pentadiene moieties. In plants, the immediate products are involved in defense mechanisms against pathogens and may be precursors of metabolic regulators. The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=99.94 E-value=4.8e-27 Score=225.50 Aligned_cols=99 Identities=40% Similarity=0.753 Sum_probs=89.2
Q ss_pred CCceE---EEEeeecCCCCCCc----cccccccccCCCCCCCcEEEEEEEecCCCCCceEEEEEEeCCCCceeeeeEEEc
Q 003699 2 TANTY---FVQINIYSETGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLD 74 (802)
Q Consensus 2 ~~~~~---~vs~~~~~~tg~~k----~~~~~~~~~~~~~~~~~~~y~~~f~~~~~fG~pgai~v~n~~~~e~fl~~i~v~ 74 (802)
+|+.+ |||+++||+||+|| +.|++|..+. +++++|+++|+||++||+||||+|+|+|++||||++|+|+
T Consensus 31 lGk~v~lqLVSs~~d~~tg~~k~~~~~~l~~~~~~~----~~e~~y~~~F~v~~~fG~pGAi~V~N~h~~EffLksitLe 106 (137)
T cd01751 31 LGRSLLLELVSSELDPKTGKGKKGKAAFLEGWGKSL----AGESAYEAEFEVPASFGPPGAVLVKNEHHSEFFLKSITLE 106 (137)
T ss_pred hCCeEEEEEEEeeecCCCCCcccccceeeecccccC----CcceEEEEEEEeecccCCccEEEEEECCCceEEEEEEEEe
Confidence 34554 56999999999666 8999998543 6678999999999999999999999999999999999999
Q ss_pred cCCC-CcEEEeeccccccCCCCccceEEeec
Q 003699 75 GPRN-GPVNITCGSWVQSKHVNKQKRIFFTN 104 (802)
Q Consensus 75 ~~p~-~~~~Fpc~sWV~~~~~~~~~riff~~ 104 (802)
+.|+ |+++|+|||||||.++|+.+||||+|
T Consensus 107 ~~p~~g~v~F~CNSWVyp~~~~~~~RiFFsN 137 (137)
T cd01751 107 GFGGSGTITFVCNSWVYPKKDYPDKRIFFPN 137 (137)
T ss_pred CCCCCccEEEEccccCccCCCCCCCCEEccC
Confidence 8895 89999999999999999999999997
No 6
>smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain.
Probab=98.85 E-value=5.9e-09 Score=95.88 Aligned_cols=55 Identities=38% Similarity=0.750 Sum_probs=47.8
Q ss_pred cEEEEEEEecCCCCCceEEEEEEeCC-CCceeeeeEEEccCCCC-cEEEeecccccc
Q 003699 37 HIIYESKFEVPPSFGEVGAILVENEH-HKEMYLNDIVLDGPRNG-PVNITCGSWVQS 91 (802)
Q Consensus 37 ~~~y~~~f~~~~~fG~pgai~v~n~~-~~e~fl~~i~v~~~p~~-~~~Fpc~sWV~~ 91 (802)
...|+..|+++.++|++++|+|++++ ..+|||++|+|++.+++ .++||||+||++
T Consensus 48 g~~~~f~v~~~~~lG~l~~v~v~~d~~~~~w~l~~V~V~~~~~~~~~~F~c~~Wl~~ 104 (105)
T smart00308 48 GSTYEFTFDVDEDFGELGAVKIKNEHRHPEWFLKSITVKDLPTGGKYHFPCNSWVYP 104 (105)
T ss_pred CceEEEEEecccCCCCcEEEEEEeCCCCCCeEEEEEEEEECCCCCEEEEEcCceeCC
Confidence 34566677799999999999999999 79999999999866655 899999999976
No 7
>PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1.13.11.- from EC) are a class of iron-containing dioxygenases which catalyses the hydroperoxidation of lipids, containing a cis,cis-1,4-pentadiene structure. They are common in plants where they may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. In mammals a number of lipoxygenases isozymes are involved in the metabolism of prostaglandins and leukotrienes []. Sequence data is available for the following lipoxygenases: Plant lipoxygenases (1.13.11.12 from EC, IPR001246 from INTERPRO). Plants express a variety of cytosolic isozymes as well as what seems to be a chloroplast isozyme []. Mammalian arachidonate 5-lipoxygenase (1.13.11.34 from EC, IPR001885 from INTERPRO). Mammalian arachidonate 12-lipoxygenase (1.13.11.31 from EC, IPR001885 from INTERPRO). Mammalian erythroid cell-specific 15-lipoxygenase (1.13.11.33 from EC, IPR001885 from INTERPRO). The iron atom in lipoxygenases is bound by four ligands, three of which are histidine residues []. Six histidines are conserved in all lipoxygenase sequences, five of them are found clustered in a stretch of 40 amino acids. This region contains two of the three iron-ligands; the other histidines have been shown [] to be important for the activity of lipoxygenases. This entry represents a domain found in lipoxygenases and other enzymes. It is known as the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain, is found in a variety of membrane or lipid associated proteins. Structurally, this domain forms a beta-sandwich composed of two sheets of four strands each [, , ]. The most highly conserved regions coincide with the beta-strands, with most of the highly conserved residues being buried within the protein. An exception to this is a surface lysine or arginine that occurs on the surface of the fifth beta-strand of the eukaryotic domains. In pancreatic lipase, the lysine in this position forms a salt bridge with the procolipase protein. The conservation of a charged surface residue may indicate the location of a conserved ligand-binding site. It is thought that this domain may mediate membrane attachment via other protein binding partners.; GO: 0005515 protein binding; PDB: 3FG3_D 3FG1_C 3FG4_D 3DY5_A 2FNQ_B 3O8Y_B 3V99_B 3V92_A 3V98_B 1HPL_A ....
Probab=98.72 E-value=3.3e-08 Score=91.42 Aligned_cols=64 Identities=22% Similarity=0.544 Sum_probs=55.6
Q ss_pred cEEEEEEEecCCCCCceEEEEEEeC---CCCceeeeeEEEccCCCC-cEEEeeccccccCCCCccceEEe
Q 003699 37 HIIYESKFEVPPSFGEVGAILVENE---HHKEMYLNDIVLDGPRNG-PVNITCGSWVQSKHVNKQKRIFF 102 (802)
Q Consensus 37 ~~~y~~~f~~~~~fG~pgai~v~n~---~~~e~fl~~i~v~~~p~~-~~~Fpc~sWV~~~~~~~~~riff 102 (802)
.++|.++ .+.++|+|.+|.|+++ ..+.|||++|+|...+.+ .+.||||+||....+++..|+||
T Consensus 46 ~d~F~i~--~~~~lG~i~~i~i~~~~~~~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~rvf~ 113 (113)
T PF01477_consen 46 TDTFTIE--TPEDLGEIQKIRIWHDGSGPSPSWYLDSVVVTDGETGRTYTFPCNRWLDPDKDYKTERVFF 113 (113)
T ss_dssp EEEEEEE--ESSCGCSEEEEEEEEESSSSSSEEEEEEEEEEETTTSEEEEEEEEEEESTTEGCSSEEEEE
T ss_pred eEEeeee--ecccCCCCcEEEEEEccCCCccceEEEEEEEEeCCCCcEEEEEcCCEECCCCCCCCccEEC
Confidence 4455555 6789999999999998 679999999999765666 89999999999999999999998
No 8
>cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates.
Probab=98.54 E-value=6.9e-07 Score=83.58 Aligned_cols=63 Identities=10% Similarity=0.220 Sum_probs=53.1
Q ss_pred cEEEEEEEecCCCCCceEEEEEEeCCCC---ceeeeeEEEccCCCC-cEEEeeccccccCCCCccceEE
Q 003699 37 HIIYESKFEVPPSFGEVGAILVENEHHK---EMYLNDIVLDGPRNG-PVNITCGSWVQSKHVNKQKRIF 101 (802)
Q Consensus 37 ~~~y~~~f~~~~~fG~pgai~v~n~~~~---e~fl~~i~v~~~p~~-~~~Fpc~sWV~~~~~~~~~rif 101 (802)
.++|.++ ++.++|++.+|+|++++.. +|||++|+|+...+| .++|||++||.....++..|+|
T Consensus 49 ~~~f~v~--~~~~lG~i~~v~l~~d~~g~~~~W~l~~V~V~~~~~~~~~~F~~~~Wl~~~~~~~~~r~~ 115 (116)
T cd00113 49 TDTFQID--LKLDIGDITKVYLRRDGSGLSDGWYCESITVQALGTKKVYTFPVNRWVLGGKWYTSVRSL 115 (116)
T ss_pred ceEEEEe--ccCCCcCeEEEEEEECCCCCCCCEEEeEEEEEeCCCCCEEEEEeCCCcccCCCCCceeec
Confidence 4455544 7789999999999998864 999999999866665 8999999999998888888876
No 9
>cd02899 PLAT_SR Scavenger receptor protein. A subfamily of PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and polycystin, but also as a single domain or as repeats.The putative function of this domain is to facilitate access to sequestered membrane or micelle bound substrates. This subfamily contains Toxoplasma gondii Scavenger protein TgSR1.
Probab=98.25 E-value=4.5e-06 Score=78.13 Aligned_cols=53 Identities=13% Similarity=0.343 Sum_probs=44.9
Q ss_pred CCcEEEEEEEecCCCCCceEEEEEEeCC-CCceeeeeEEEccCCCC-cEEEeecccccc
Q 003699 35 DGHIIYESKFEVPPSFGEVGAILVENEH-HKEMYLNDIVLDGPRNG-PVNITCGSWVQS 91 (802)
Q Consensus 35 ~~~~~y~~~f~~~~~fG~pgai~v~n~~-~~e~fl~~i~v~~~p~~-~~~Fpc~sWV~~ 91 (802)
...++|.|+ +.++|++-.|+|.|.. .+.|||+.|+|+. |+| .++||||+|+..
T Consensus 44 G~~d~F~v~---~~dLG~l~~i~l~n~g~~~~Wf~~~V~V~~-~~g~~~~Fpc~rWla~ 98 (109)
T cd02899 44 GSLKRIRFR---AADVGDINAIILSNTALNDPWYCDYVRIKS-EDGKVFAFNVKRWIGY 98 (109)
T ss_pred CceEEEEEC---ccccCceEEEEEECCCCCCCceeeEEEEEC-CCCCEEEEEcceeeCC
Confidence 456778766 7899999999998876 4899999999985 766 788999999964
No 10
>cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.90 E-value=0.00013 Score=69.26 Aligned_cols=65 Identities=12% Similarity=0.402 Sum_probs=49.7
Q ss_pred CCcEEEEEEEecCCCCCceEEEEEEeCCC---CceeeeeEEEccCCCC-cEEEeeccccccCCCC-ccceEEe
Q 003699 35 DGHIIYESKFEVPPSFGEVGAILVENEHH---KEMYLNDIVLDGPRNG-PVNITCGSWVQSKHVN-KQKRIFF 102 (802)
Q Consensus 35 ~~~~~y~~~f~~~~~fG~pgai~v~n~~~---~e~fl~~i~v~~~p~~-~~~Fpc~sWV~~~~~~-~~~riff 102 (802)
...++|.++ . .++|++-.|+|+.+.. ..|||+.|+|.....+ ..+||||+|+...+.. .-.|++.
T Consensus 49 Gs~d~F~i~--~-~~lG~l~~i~i~~d~~g~~~~W~~~~V~V~~~~~~~~~~F~~~~Wl~~~~~dg~~~r~~~ 118 (120)
T cd01756 49 GQTDKFTVE--A-VDLGKLKKIRIGHDNSGLGAGWFLDKVEIREPGTGDEYTFPCNRWLDKDEDDGQIVRELY 118 (120)
T ss_pred CCeEEEEEE--e-cCCCCeEEEEEEECCCCCCCCcEEeEEEEEECCCceEEEEEeCCccCCCCCCCEEEEEEE
Confidence 345678777 4 7999999999998774 7999999999764456 7889999999876532 2245553
No 11
>cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a unique subfamily of the mammalian lipoxygenases, they catalyze enzymatic lipid peroxidation in complex biological structures via direct dioxygenation of phospholipids and cholesterol esters of biomembranes and plasma lipoproteins. Both types of enzymes are cytosolic but need this domain to access their sequestered membrane or micelle bound substrates.
Probab=97.90 E-value=6.3e-05 Score=70.87 Aligned_cols=56 Identities=21% Similarity=0.442 Sum_probs=46.5
Q ss_pred CCcEEEEEEEecCCCCCceEEEEEEeCC---CCceeeeeEEEccCCCC-cEEEeeccccccCC
Q 003699 35 DGHIIYESKFEVPPSFGEVGAILVENEH---HKEMYLNDIVLDGPRNG-PVNITCGSWVQSKH 93 (802)
Q Consensus 35 ~~~~~y~~~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~v~~~p~~-~~~Fpc~sWV~~~~ 93 (802)
...++|.++ ++.++|++-.|.|+.+. ...|||+.|+|++ +.+ .++||||+|+.+..
T Consensus 47 G~~d~F~v~--~~~~lG~l~~i~i~~d~~g~~~~W~l~~V~V~~-~~~~~~~F~c~rWl~~~~ 106 (113)
T cd01753 47 GAVDEYKVK--VPEDLGELLLVRLRKRKYLLFDAWFCNYITVTG-PGGDEYHFPCYRWIEGYG 106 (113)
T ss_pred CCeeEEEEe--cccCCCCcEEEEEEECCCCCCCCeeecEEEEEc-CCCCEEEEEhHHeECCCC
Confidence 445677776 77899999999999876 4899999999985 446 78999999998764
No 12
>cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family. PLAT/LH2 domains consists of an eight stranded beta-barrel. In RabIP1 this domain may participate in lipid-mediated modulation of Rab6IP1's function via it's generally proposed function of mediating interaction with lipids or membrane bound proteins.
Probab=97.84 E-value=0.00011 Score=69.46 Aligned_cols=55 Identities=13% Similarity=0.392 Sum_probs=44.1
Q ss_pred EEEEEEecCCCCCceEEEEEEeCC---CCceeeeeEEEccCCCC-cEEEeeccccccCCC
Q 003699 39 IYESKFEVPPSFGEVGAILVENEH---HKEMYLNDIVLDGPRNG-PVNITCGSWVQSKHV 94 (802)
Q Consensus 39 ~y~~~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~v~~~p~~-~~~Fpc~sWV~~~~~ 94 (802)
.|.+.+. +.++|++-.|+|+.+. ...|||+.|.|+..+++ .++||||+|+...+.
T Consensus 42 ~f~~~v~-~~~LG~L~~irIwHDnsG~~~~Wfl~~V~V~d~~t~~~~~FpC~rWLa~~~~ 100 (114)
T cd01757 42 SLEMTFD-CQNLGKLTTVQIGHDNSGLLAKWLVEYVMVRNEITGHTYKFPCGRWLGEGVD 100 (114)
T ss_pred ceEEEEe-cCCcCCcEEEEEEECCCCCCCCeeeeEEEEEeCCCCCEEEEecCceecCCCC
Confidence 3444433 3899999999999877 38999999999876766 799999999987654
No 13
>cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological functions remain poorly defined. In human, mutations in polycystin-1 (PKD1) and polycystin-2 (PKD2) have been shown to be the cause for autosomal dominant polycystic kidney disease (ADPKD). The generally proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=97.56 E-value=0.00062 Score=64.68 Aligned_cols=56 Identities=16% Similarity=0.356 Sum_probs=44.3
Q ss_pred cEEEEEEEecCCCCCceEEEEEEeCC---CCceeeeeEEEccCCCC-cEEEeeccccccCCC
Q 003699 37 HIIYESKFEVPPSFGEVGAILVENEH---HKEMYLNDIVLDGPRNG-PVNITCGSWVQSKHV 94 (802)
Q Consensus 37 ~~~y~~~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~v~~~p~~-~~~Fpc~sWV~~~~~ 94 (802)
.++|.+. .+.++|++-.|+|..+. ...|||++|+|+....+ ...||||+|+...+.
T Consensus 50 ~~~f~i~--~~~dlG~l~~i~l~hd~~g~~~~W~l~~V~V~~~~t~~~~~F~~~rWl~~~~~ 109 (120)
T cd01752 50 VDSFLLT--TPFPLGELQSIRLWHDNSGLSPSWYLSRVIVRDLQTGKKWFFLCNDWLSVEEG 109 (120)
T ss_pred eeEEEec--CccCCCCccEEEEEECCCCCCCCeEEEEEEEEECCCCcEEEEEeCcEECCcCC
Confidence 3455554 67899999999998766 37999999999754455 789999999987653
No 14
>cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function. Many of its members are stress induced. In general, PLAT/LH2 consists of an eight stranded beta-barrel and it's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=97.48 E-value=0.00035 Score=67.46 Aligned_cols=59 Identities=8% Similarity=0.126 Sum_probs=47.2
Q ss_pred CCCcEEEEEEEecCCCCCceEEEEEEeCC---CCceeeeeEEEccCCC---C-cEEEeeccccccCCC
Q 003699 34 KDGHIIYESKFEVPPSFGEVGAILVENEH---HKEMYLNDIVLDGPRN---G-PVNITCGSWVQSKHV 94 (802)
Q Consensus 34 ~~~~~~y~~~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~v~~~p~---~-~~~Fpc~sWV~~~~~ 94 (802)
....++|.|+ .+.++|++-.|+|+.+. ...|||..|+|+.... + .++||||+|+...+.
T Consensus 54 rG~~d~F~v~--~~~~lG~l~~irI~HDn~G~~p~W~l~~V~V~d~~~~~~~~~~~F~c~rWLa~d~~ 119 (129)
T cd01754 54 RGNLDRFSGR--GPCLPSPPCWMNLTSDGTGNHPGWYVNYVEVTQAGQHAPCMQHLFAVEQWLATDES 119 (129)
T ss_pred CCCccEEEEE--eccCCCCeEEEEEEECCCCCCCCcccCEEEEEeCCCCCcCcEEEEEecEeccCCCC
Confidence 3456788887 67889999999999866 3799999999975432 3 689999999977653
No 15
>PF06232 ATS3: Embryo-specific protein 3, (ATS3); InterPro: IPR010417 This is a family of plant seed-specific proteins identified in Arabidopsis thaliana (Mouse-ear cress). ATS3 is expressed in a pattern similar to the Arabidopsis seed storage protein genes [].
Probab=45.63 E-value=91 Score=30.35 Aligned_cols=53 Identities=8% Similarity=0.102 Sum_probs=38.9
Q ss_pred cEEEEEEEecCCCCCceEEEEEEeCCCCceeeeeEEEccCCCCcEEEeeccccccC
Q 003699 37 HIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSK 92 (802)
Q Consensus 37 ~~~y~~~f~~~~~fG~pgai~v~n~~~~e~fl~~i~v~~~p~~~~~Fpc~sWV~~~ 92 (802)
.++|+|. -+. ++.+=-+.|+....+.|+.++|+|.+....+++|-.|+||-+.
T Consensus 65 ~DtF~v~--G~C-~~~IC~lyL~r~G~dGW~Pe~V~Iy~~~~~~~~F~~~~~lp~~ 117 (125)
T PF06232_consen 65 TDTFQVT--GPC-LYQICYLYLYRSGSDGWKPEWVQIYGSGSKPVTFYFNTFLPNG 117 (125)
T ss_pred cceeEee--ccc-CCcccEEEEEEccCCCCEeCeEEEEEcCCCCeEEECCCcCCCC
Confidence 4678776 333 4466667777766789999999996533448999999999663
No 16
>KOG2080 consensus Uncharacterized conserved protein, contains DENN and RUN domains [Signal transduction mechanisms]
Probab=44.98 E-value=15 Score=45.20 Aligned_cols=51 Identities=16% Similarity=0.475 Sum_probs=37.5
Q ss_pred EEEecCCCCCceEEEEEEeCC---CCceeeeeEEEccCCCC-cEEEeeccccccCC
Q 003699 42 SKFEVPPSFGEVGAILVENEH---HKEMYLNDIVLDGPRNG-PVNITCGSWVQSKH 93 (802)
Q Consensus 42 ~~f~~~~~fG~pgai~v~n~~---~~e~fl~~i~v~~~p~~-~~~Fpc~sWV~~~~ 93 (802)
.+|+. +++|..--++|-... ...||++.|.|..-=+| ++-|||++|.-+..
T Consensus 1015 f~F~~-kNLG~LtT~rIGHdnS~~~~kW~vEyV~vRNEiTG~TYKFPCGrw~G~ge 1069 (1295)
T KOG2080|consen 1015 FKFDH-KNLGILSTLRIGHQQSEKPVQWFLEYVLVRNEITGQTYKFPCGRWFGNGE 1069 (1295)
T ss_pred eEEec-cccceeeeEEecccCCCcchHHHHHHhhhhceeccceeccccccccCCcc
Confidence 34433 789999988885433 37899999887531256 89999999997654
No 17
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=39.91 E-value=1.2e+02 Score=28.78 Aligned_cols=52 Identities=10% Similarity=0.109 Sum_probs=39.3
Q ss_pred CcEEEEEEEecCCCCCceEEEEEEeCC----------CCceeeeeEEEccCCCCcEEEeecc
Q 003699 36 GHIIYESKFEVPPSFGEVGAILVENEH----------HKEMYLNDIVLDGPRNGPVNITCGS 87 (802)
Q Consensus 36 ~~~~y~~~f~~~~~fG~pgai~v~n~~----------~~e~fl~~i~v~~~p~~~~~Fpc~s 87 (802)
....|+.-+..+.++|..-.|.++=+. ...||++.|+|+...++.-..-|.+
T Consensus 44 ~g~~~sfli~t~~~lG~l~~v~~~~dn~~~~~~~~~~~p~~~~~~I~Vq~get~~~~~FC~~ 105 (120)
T cd01755 44 PNKTYSFLIDTEVDIGDLLKVKFKWENNVINSNSGETLPKLGARKIRVKSGETQKKFTFCSQ 105 (120)
T ss_pred CCCEEEEEEEcCCCccceEEEEEEEcCCCcccccccCCCcEEEEEEEEEECCCCCEEEEECC
Confidence 345677677789999999999997433 2489999999986666655566776
No 18
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=29.72 E-value=1.4e+02 Score=34.65 Aligned_cols=109 Identities=22% Similarity=0.318 Sum_probs=72.4
Q ss_pred hHHHHHhhccCCccCchhhccccchhhhhhchHHH--------------HhhcccCCcccccccCCchhHHHH--HHHHH
Q 003699 469 EPYIIATNRQLSAMHPINRLLQPHFRYTMEINALA--------------REALVNAGGIIESTFSPGKYSMEL--SSVAY 532 (802)
Q Consensus 469 Epf~vAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~A--------------R~~LI~~gG~id~~~~~G~~~~el--~~~~y 532 (802)
+-+.+|..+|=|..-=+..+|.|--..++.||..= -..=|+.=|++.-.-+|+.+.-|+ ++..|
T Consensus 91 ~~L~~A~q~qKPds~elad~LkPI~e~i~eI~~fkE~nRkS~~FNhLsav~e~i~algWVav~~tP~p~vke~~daa~FY 170 (480)
T KOG2675|consen 91 AFLWVASQKQKPDSNELADLLKPINEEIGEINNFKEKNRKSPFFNHLSAVSESIPALGWVAVKPTPAPYVKEFKDAAQFY 170 (480)
T ss_pred HHHHHHHhccCCChHHHHHHhhhHHHhhhHHhhhhhcccCchHHHHHHHHHhhcccceeEecCCCCchHHHHHHHHHHHH
Confidence 44667888888888899999999999999998743 222234446665444566665444 23334
Q ss_pred hccCCCCCCCCchHHHh-CCCCCCCCCCCccccccccCCccchhhHHHHHHHHHHHHhhcccccccccCccCCHHHHHHH
Q 003699 533 DKHWRFDHEALPKDLIS-RGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWW 611 (802)
Q Consensus 533 ~~~w~f~~~~lP~dL~~-RG~~~~d~~~~~g~~~~lp~YpYrdDgl~iW~AI~~fV~~yv~~yY~~D~~V~~D~ELQaW~ 611 (802)
.+ .-|+. ||- | ..-+ +||+.|+.+| .|||+++
T Consensus 171 ~N----------rvLkEyk~~---------------------D-~~hv-----eWvKa~l~l~----------~eL~~YV 203 (480)
T KOG2675|consen 171 TN----------RVLKEYKEK---------------------D-PRHV-----EWVKAYLALF----------LELQAYV 203 (480)
T ss_pred HH----------HHHHHhccC---------------------C-hhHH-----HHHHHHHHHH----------HHHHHHH
Confidence 33 12222 333 1 1222 6999999998 7899999
Q ss_pred HHHHhccCCCCCC
Q 003699 612 TEIRTVGHADKKD 624 (802)
Q Consensus 612 ~Ei~~~G~~d~~~ 624 (802)
+|-.+-|....++
T Consensus 204 k~hhtTGl~W~~~ 216 (480)
T KOG2675|consen 204 KEHHTTGLVWNKD 216 (480)
T ss_pred HHhccccceecCC
Confidence 9999888876665
No 19
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=27.85 E-value=37 Score=36.28 Aligned_cols=24 Identities=29% Similarity=0.861 Sum_probs=20.0
Q ss_pred HHHHHhhcccccccccCccCCHHHHHHHHH
Q 003699 584 KQWVTDFVNHYYPNPSSVESDEELRSWWTE 613 (802)
Q Consensus 584 ~~fV~~yv~~yY~~D~~V~~D~ELQaW~~E 613 (802)
.+||..||+.|| ..+.|+..|+++
T Consensus 178 ~~~Ve~YIKAyY------l~e~e~~~W~~~ 201 (234)
T PF10474_consen 178 REYVENYIKAYY------LPEEELEEWIRT 201 (234)
T ss_pred HHHHHHHHHHHc------CCHHHHHHHHHh
Confidence 579999999999 345689999975
No 20
>TIGR03124 ctirate_citX holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems.
Probab=26.86 E-value=29 Score=35.16 Aligned_cols=55 Identities=29% Similarity=0.486 Sum_probs=35.2
Q ss_pred cccCcCCCChhhHHHHHHHHHhhhCCCCCCcccCCeEeeccccCCCCCCCCCCCcccccCCCCCCCCCCccC
Q 003699 105 KSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCR 176 (802)
Q Consensus 105 ~~~LP~~tp~~l~~~R~~EL~~~rg~g~g~r~~~driYd~~~yndlG~p~~~~~l~r~vlgg~~~pyprr~r 176 (802)
.+++--+.++.-.+..-=+|++.. .-=|++|.|||+.-| ..+.|--+| +| ||||=
T Consensus 80 E~~~~v~~~a~~vK~~~i~iEe~h--------plGRL~DlDV~~~~g-----~~iSR~~lg---~~-~R~Cl 134 (165)
T TIGR03124 80 EAFLVVDAPALELKRLMIKLEESH--------PLGRLWDIDVLDADG-----KSLSRTDLG---LP-PRKCL 134 (165)
T ss_pred EEEEEeCCCHHHHHHHHHHHHhCC--------chhhheeheeecCCC-----CCcCHHHcC---CC-CCeee
Confidence 445555556555666666666654 223899999996433 346687777 34 89886
No 21
>PF12588 PSDC: Phophatidylserine decarboxylase ; InterPro: IPR022237 This domain family is found in bacteria and eukaryotes, and is approximately 140 amino acids in length. The family is found in association with PF02666 from PFAM. Phosphatidylserine decarboxylase (PSD) is an important enzyme in the synthesis of phosphatidylethanolamine in both prokaryotes and eukaryotes.
Probab=24.45 E-value=1e+02 Score=30.52 Aligned_cols=48 Identities=19% Similarity=0.273 Sum_probs=37.7
Q ss_pred CccCCHHHHHHHHHHHhccCCCCCCCCCCC-CCCChhHHHHHHhhheecc
Q 003699 600 SVESDEELRSWWTEIRTVGHADKKDEPWWP-VLKTPEDLIDIITTIAWVA 648 (802)
Q Consensus 600 ~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p-~i~t~~~Lv~~lT~iIf~a 648 (802)
-|.+|++|..+++++.++ .....+-.|.| .+++.++|..++-.||-+|
T Consensus 11 lIe~dp~l~ml~~~Mf~q-~~~~~~p~g~~~~i~~~~~mL~~ln~i~t~A 59 (141)
T PF12588_consen 11 LIESDPRLYMLFTQMFDQ-PPYNADPTGNPPQIRDYDEMLQLLNHIMTTA 59 (141)
T ss_pred HHhcCHHHHHHHHHHHhC-cccccCCCCCccccccHHHHHHHHHHHHhhC
Confidence 367899999999999987 32233334677 8999999999999999554
No 22
>PF08153 NGP1NT: NGP1NT (NUC091) domain; InterPro: IPR012971 This N-terminal domain is found in a subfamily of hypothetical nucleolar GTP-binding proteins similar to human NGP1 [].
Probab=20.10 E-value=64 Score=31.56 Aligned_cols=26 Identities=19% Similarity=0.432 Sum_probs=18.5
Q ss_pred CCCCCCCcHHH--HHHHHHHHHHHHHHH
Q 003699 732 MEQAWGDDPVI--KAAFERFSGRLKELE 757 (802)
Q Consensus 732 ~~~~~~~d~~~--~~a~~~F~~~L~~ie 757 (802)
|+..||.+.++ +.+++.|+++|.+-.
T Consensus 33 PdRrWFgNTRvI~Q~~L~~FReem~~~~ 60 (130)
T PF08153_consen 33 PDRRWFGNTRVISQEALEKFREEMGEKV 60 (130)
T ss_pred cchhhhcCceEECHHHHHHHHHHHHHhh
Confidence 34468887655 678999998887543
Done!