Query         003699
Match_columns 802
No_of_seqs    205 out of 665
Neff          5.9 
Searched_HMMs 29240
Date          Tue Mar 26 17:41:09 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/003699.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1750-1754//hhsearch_pdb/003699hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2iuk_A SEED lipoxygenase; iron   1.0       1       1 1961.7  60.2  783    6-802    69-864 (864)
  2 2iuj_A Lipoxygenase L-5; dioxy   1.0       1       1 1937.1  59.8  783    6-802    59-853 (853)
  3 1f8n_A Lipoxygenase-1; dioxyge   1.0       1       1 1929.0  56.8  784    6-802    43-839 (839)
  4 1lox_A 15-lipoxygenase, 15LOX;   1.0       1       1 1360.8  41.0  613   31-802    39-662 (662)
  5 3dy5_A Allene oxide synthase-l   1.0       1       1 1318.4  45.5  617   35-802   421-1066(1066)
  6 3v98_A Arachidonate 5-lipoxyge   1.0       1       1 1316.2  48.8  616   35-802    66-691 (691)
  7 3fg1_A Allene oxide synthase-l   1.0       1       1 1308.4  48.3  620   32-802    48-696 (696)
  8 3vf1_A 11R-lipoxygenase; LOX,    1.0       1       1 1295.4  47.6  614   33-802    66-698 (698)
  9 3rde_A Arachidonate 12-lipoxyg   1.0       1       1 1236.6  30.6  553   98-802    16-573 (573)
 10 3d3l_A Arachidonate 12-lipoxyg   1.0       1       1 1122.5  21.7  494  204-802    13-509 (541)

No 1  
>2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max}
Probab=1.00  E-value=1  Score=1961.69  Aligned_cols=783  Identities=44%  Similarity=0.801  Sum_probs=748.3

Q ss_pred             EEEEEEECCCCCCCC----CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEECCCCC-CC
Q ss_conf             889852138989975----5203663347889987289999984489999527999996889942321389816999-83
Q 003699            6 YFVQINIYSETGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRN-GP   80 (802)
Q Consensus         6 ~~vs~~~~~~tg~~k----~~~~~~~~~~~~~~~~~~~y~~~f~v~~~fG~pgai~v~n~~~~e~~l~~i~v~~~p~-~~   80 (802)
                      -|||+++||+||+||    +.|++|+.......+++++|+++|.|+++||+||||+|+|.|.+||||++|+|+++|. |.
T Consensus        69 qlvs~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e~~l~~~~l~~~~~~~~  148 (864)
T 2iuk_A           69 QLISATQTDGSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGT  148 (864)
T ss_dssp             EEEEEEEECSSSCEEEEEEEECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSCEEEEEEEEECCSSSCC
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCC
T ss_conf             99965137999987678756001435689868777279999998405679863599883798714898899813789986


Q ss_pred             EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             79962565112777964259830651276899956589899999966189988755578276223457799998787766
Q 003699           81 VNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELA  160 (802)
Q Consensus        81 ~~Fpc~sWV~~~~~~~~~riff~~~~~LP~~tp~~L~~~R~~EL~~~rg~g~g~r~~~driYdy~~yndlG~pd~~~~l~  160 (802)
                      ++|+||||||+.++|+.+||||+|++|||++||++|+++|++||+++||||+||||+||||||||||||||+||++++  
T Consensus       149 ~~f~cnswv~~~~~~~~~RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydyd~yndlg~pd~~~~--  226 (864)
T 2iuk_A          149 IEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGDP--  226 (864)
T ss_dssp             EEEEEEEEECBGGGSSSCEEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCBGGGTBC--
T ss_pred             EEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC--
T ss_conf             898537630678889988466268874864476889999999999853789876650463010345403789666888--


Q ss_pred             CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHC--C-CCC
Q ss_conf             446899-889888755789999999999777678885598887672222003454689998645444555311--6-999
Q 003699          161 RPVLGG-KEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAII--D-TDL  236 (802)
Q Consensus       161 rpvlgg-~~~pyprr~rtgr~~~~~~~~~e~~~~~~ylPrDe~Fs~~K~~~f~~~~~~~~~~~~~~~l~~~~~--~-~~~  236 (802)
                      |||||| +++||||||||||+|+++||.+|+|+. +||||||||++.|.++|.++++++++|.++|.++++++  . +..
T Consensus       227 rpvlggs~~~pyPrR~rtgr~~~~~dp~~e~~~~-~yvPrDe~F~~~K~~~f~~~~~k~~~~~~~p~l~~~~~~~~~~~~  305 (864)
T 2iuk_A          227 RPILGGCSIYPYPLRVRTGRERTRTDPNSEKPGE-VYVPRDENFGHLKSSDFLTYGIKSLSHDVIPLFKSAIFQLRVTSS  305 (864)
T ss_dssp             CCCBSSSSSSCCCCEECCCCCBCSSCTTSBCCCC-CCCCGGGSCCCSSGGGCHHHHHHHHHHTTHHHHHHHHHSSCSSCS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             8636898888898655579898888987445466-778987565722388887888999998779999988412356767


Q ss_pred             CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH--HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             999988889873079889995135678888645--444330103457521123584133236457535289997774089
Q 003699          237 GFPYFTTIDKLFNEGVNVPMPETFKEKALWRTI--LPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGL  314 (802)
Q Consensus       237 ~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~  314 (802)
                      +|+||+||++||++|+++|.       ..++..  ++.+.+.+.+.++.++|||+|++++.++++|++|++||||+|||+
T Consensus       306 ~f~sf~di~~ly~~g~~l~~-------~~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~~~~W~~DeeFarQ~LaG~  378 (864)
T 2iuk_A          306 EFESFEDVRSLYEGGIKLPT-------DILSQISPLPALKEIFRTDGENVLQFPPPHVAKVSKSGVMTDEEFAREVIAGV  378 (864)
T ss_dssp             SCCSHHHHHTTTSSCEECCH-------HHHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCSSSSSSCHHHHHHHHHHSS
T ss_pred             CCCCHHHHHHHHHCCCCCCH-------HHHCCCCCHHHHHHHHHCCCCCHHCCCCCCEECCCCHHHHCHHHHHHHHHCCC
T ss_conf             78999999999855666713-------44213474999999864033100027996420255011116499999986188


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCEECCC
Q ss_conf             95110013578988999977679999855399999751795549999854947896166333610010015788200023
Q 003699          315 NPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGS  394 (802)
Q Consensus       315 NP~~I~r~~~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~yAp  394 (802)
                      ||++|+||++||++|+|||++||+++|+||++||+..++| +||++|+++|||||+||||.+||++.++|.++++++|||
T Consensus       379 NP~~I~r~~e~P~~s~ldp~~yg~~~s~it~e~i~~~l~g-~tl~eal~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp  457 (864)
T 2iuk_A          379 NPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYAT  457 (864)
T ss_dssp             SCSCCEECSSSSCCCCSCHHHHCCCCCCCCHHHHGGGTTT-CCHHHHHHTTCEEEEECHHHHGGGHHHHHTSTTCCCCEE
T ss_pred             CCHHHHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCC-CCHHHHHHCCCEEEECCHHHHCCCHHHCCCCCCCEEECC
T ss_conf             9555430010697344775441785563679999611378-769999866987995450430641132156788620235


Q ss_pred             CEEEEECCCCCEEEEEEEECCCCCCCCC--CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf             1068536999423589983179999999--98603517999999227899999987210013356665410022124799
Q 003699          395 RTLFFSYPSGTLRPLAIELTRPPMDGKP--QWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYI  472 (802)
Q Consensus       395 ~~Lffl~~~g~L~PiAIqL~~~~~~~~~--~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~  472 (802)
                      +||||++++|+|+||||||+++++.+++  +.++||||+|+++++|.|+|||+||++||+++||+++||++||+++|||+
T Consensus       458 ~~Lffl~~dG~L~PlAIqLs~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~  537 (864)
T 2iuk_A          458 RTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFA  537 (864)
T ss_dssp             EEEEEECTTSCEEEEEEEEEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHH
T ss_pred             EEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             57899868997767999952798876666778885898887777418999999999888899999886620257889999


Q ss_pred             HHHHCCCCCCCCHHHCCCCCHHHHHHCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCC
Q ss_conf             98603478668421204310132200169998603368851122457844699999999711677887777457885799
Q 003699          473 IATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGM  552 (802)
Q Consensus       473 iAt~R~Ls~~HPI~kLL~PHfr~tl~IN~~AR~~Li~~gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~  552 (802)
                      |||+||||.+|||||||.||||+||+||++||+.||++||++|++|++|.++++|++++|+. |+|++++||+||++|||
T Consensus       538 IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~elss~ayk~-w~f~~~~LP~DL~~RGv  616 (864)
T 2iuk_A          538 IATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKN-WVFTHQALPADLVKRGL  616 (864)
T ss_dssp             HHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGSSHHHHHHHTTS
T ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC-CCCCCCCCCHHHHHCCC
T ss_conf             99712488657367765788887888789999734088871122126761079999999735-77740338488885698


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             87899998543335557844121289999999979864410266566766787899999999840578889999999889
Q 003699          553 AVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLK  632 (802)
Q Consensus       553 ~~~D~~~~~g~~~~l~~YpYrdDgl~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~l~  632 (802)
                      +++|+++|||+++.||+||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+
T Consensus       617 a~~D~~~p~gl~l~ipdYpYadDGL~iW~AIk~~V~~yV~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~  696 (864)
T 2iuk_A          617 AIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQ  696 (864)
T ss_dssp             EEECSSSTTSEEESSSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTTGGGTTCTTCCCSS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             77776666541124778875402799999999999999998758812203789999999999725788777788887767


Q ss_pred             CHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHH
Q ss_conf             95679998745200133321111356631131259963213778999999964688641182778972199968999999
Q 003699          633 TPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVM  712 (802)
Q Consensus       633 t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m  712 (802)
                      |+++||++||+|||+||+||||||||||+|+||+||+|++||+|||+  ||..++++++.++++++|++||++.||+.+|
T Consensus       697 T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~r~p~P~--~G~~~~~~l~~~pe~~~L~tLP~~~qa~~~m  774 (864)
T 2iuk_A          697 TTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPA--EGTPEYDEMVKNPQKAYLRTITPKFETLIDL  774 (864)
T ss_dssp             SHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHTSTTTSCCCCCSCCCC--TTSHHHHHHHHCHHHHHHTTSCCHHHHHHHH
T ss_pred             CHHHHHHHHHEEEECCCCHHHHHCCCCCHHHCCCCCCCHHHCCCCCC--CCCHHHHHHHHCHHHHHHHHCCCHHHHHHHH
T ss_conf             79999998652323044124544026321214467897555678999--9854476653170999988688999999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf             99985138999974224657778899378999999999999999999987405610002579866781000379999987
Q 003699          713 AILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVT  792 (802)
Q Consensus       713 ~~~~~LS~~~~de~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~~~~~~PY~yL~P~~~~g~t  792 (802)
                      +++|+||+|++||+|||+|++++|++|+++++|+++|+++|++||+.|++||++++||||+||+++||+||+|+|+||||
T Consensus       775 ~l~~lLS~h~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~lPY~yL~P~s~~g~t  854 (864)
T 2iuk_A          775 SVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRSSEEGLT  854 (864)
T ss_dssp             HHHHHHTCCCSSCCBTTCCSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTCCCCTTCSCCCSSSC
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCC
T ss_conf             99999842788853146667622235878999999999999999999999866812320478878771004888878866


Q ss_pred             CCCCCCCCCC
Q ss_conf             6887753349
Q 003699          793 GQGVPYSISI  802 (802)
Q Consensus       793 ~~~IpnSIsI  802 (802)
                      ||||||||||
T Consensus       855 ~~~IPNSIsI  864 (864)
T 2iuk_A          855 FKGIPNSISI  864 (864)
T ss_dssp             SCCCBSSCCC
T ss_pred             CCCCCCCCCC
T ss_conf             5787873569


No 2  
>2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max}
Probab=1.00  E-value=1  Score=1937.13  Aligned_cols=783  Identities=45%  Similarity=0.821  Sum_probs=747.4

Q ss_pred             EEEEEEECCCCCCCC----CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEECCCCC-CC
Q ss_conf             889852138989975----5203663347889987289999984489999527999996889942321389816999-83
Q 003699            6 YFVQINIYSETGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRN-GP   80 (802)
Q Consensus         6 ~~vs~~~~~~tg~~k----~~~~~~~~~~~~~~~~~~~y~~~f~v~~~fG~pgai~v~n~~~~e~~l~~i~v~~~p~-~~   80 (802)
                      -|||+++| +||+||    +.|++|+++ ....+++++|+|+|.|+++||+||||+|+|+|.+||||++|+|+++|. |.
T Consensus        59 qlvs~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~f~~~~~~G~~gav~v~n~~~~e~fl~~i~l~~~p~~g~  136 (853)
T 2iuj_A           59 QLISATKA-DGGKGKVGKATNLRGKITL-PTIGAKEEAYDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGT  136 (853)
T ss_dssp             EEEEEEEE-SSSSEEEEEEEECCCCCCC-SSCCTTEEEEEEEEECCSSSCCEEEEEEEECSSSCEEEEEEEECCCTTSCC
T ss_pred             EEEEEEEC-CCCCCCCCCCCCCCCCCCC-CCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCC
T ss_conf             99996547-9999666876600144578-878778458999742444579725999982688500576899920589973


Q ss_pred             EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             79962565112777964259830651276899956589899999966189988755578276223457799998787766
Q 003699           81 VNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELA  160 (802)
Q Consensus        81 ~~Fpc~sWV~~~~~~~~~riff~~~~~LP~~tp~~L~~~R~~EL~~~rg~g~g~r~~~driYdy~~yndlG~pd~~~~l~  160 (802)
                      ++|||||||++.++++.+||||+|++|||++||++|+++|++||+++||||+||||+||||||||+|||||+||++++++
T Consensus       137 ~~F~c~sWv~~~~~~~~~riff~n~~ylp~~tp~~l~~~R~~EL~~lrg~g~g~rk~~driYdy~~yndlg~pd~~~~~~  216 (853)
T 2iuj_A          137 IHFICNSWVYNSKHYKTDRIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEKYA  216 (853)
T ss_dssp             EEEEEEEEECBTTSCSSCEEEECSCCCCGGGSCTTTHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCCSCCGGGCTTSC
T ss_pred             EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf             89870553357878988759972786675668888999999999995278976545456056511103588876675435


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHH--CCCCCCC
Q ss_conf             44689988988875578999999999977767888559888767222200345468999864544455531--1699999
Q 003699          161 RPVLGGKEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAI--IDTDLGF  238 (802)
Q Consensus       161 rpvlgg~~~pyprr~rtgr~~~~~~~~~e~~~~~~ylPrDe~Fs~~K~~~f~~~~~~~~~~~~~~~l~~~~--~~~~~~f  238 (802)
                      ||||||.++||||||||||+++++||.+|+|+..+||||||||++.|.++|.++++++++|.++|.+++++  +.+..+|
T Consensus       217 rpvlgGs~~Pyprr~rtgr~~~~~d~~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~~f  296 (853)
T 2iuj_A          217 RPVLGGSALPYPRRGRTGRGKTRKDPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKSVAQDVLPVLTDAFDGNLLSLDF  296 (853)
T ss_dssp             CCCBSSSSSCCCCEECCCCCBCSSCTTSBCCCSSCCCCGGGSCCCSSGGGCHHHHHHHHHTTHHHHHHHHHHTTSSCSSC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             75458987988765557999766786544666678889765546212777878789999987699998885056776778


Q ss_pred             CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf             99888898730798899951356788886454--4433010345752112358413323645753528999777408995
Q 003699          239 PYFTTIDKLFNEGVNVPMPETFKEKALWRTIL--PRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNP  316 (802)
Q Consensus       239 ~sf~di~~ly~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~NP  316 (802)
                      +||+||++||++|++++.       ..+++.+  +.+.+.+.+.+++++|||.|+++++++++|++|++||||+|||+||
T Consensus       297 ~~f~di~~ly~~g~~l~~-------~~~~~~~p~~~~~~~~~~~~~~~lkfp~P~vi~~~~~~W~~DeeFarQ~LaG~NP  369 (853)
T 2iuj_A          297 DNFAEVRKLYEGGVTLPT-------NFLSNITPIPIIKELFRTDGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNP  369 (853)
T ss_dssp             CSHHHHHHHHHHCCCCCH-------HHHHHSCCCTTSSTTTTCCSSSCCCCCCCGGGTSCTTTTTSHHHHHHTTTSSSST
T ss_pred             CCHHHHHHHHHCCCCCCH-------HHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHCHHHHHHHHHCCCCC
T ss_conf             999999998754566704-------4430348399999875224310013899743414612111629999998628896


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCEECCCCE
Q ss_conf             11001357898899997767999985539999975179554999985494789616633361001001578820002310
Q 003699          317 YSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSRT  396 (802)
Q Consensus       317 ~~I~r~~~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~yAp~~  396 (802)
                      ++|+||++||++|+|||++||+++|+||++||+..++| +||++|+++|||||+||||++||+++++|. ++++.|||+|
T Consensus       370 ~~I~r~~e~P~~~~ldp~~yg~~~s~it~e~i~~~l~g-~tl~~al~~grLFi~Dy~d~~lp~~~~in~-~~~~~yAp~~  447 (853)
T 2iuj_A          370 NVIKIIEEFPLSSKLDTQAYGDHTCIITKEHLEPNLGG-LTVEQAIQNKKLFILDHHDYLIPYLRKINA-NTTKTYATRT  447 (853)
T ss_dssp             TCCEECCSSSCCCCSCTTTTCCCCCCCCTTTTSCSSCC-SCHHHHHHTTCEEECCCSTTTGGGHHHHHT-SSCCCCBCCE
T ss_pred             HHEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHCCCC-CCHHHHHHCCCEEEECCHHHHCCHHHCCCC-CCCEEECCEE
T ss_conf             11124200686344775441875564679998610378-769999765998995144652620102588-8867644567


Q ss_pred             EEEECCCCCEEEEEEEECCCCCCCCC--CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             68536999423589983179999999--9860351799999922789999998721001335666541002212479998
Q 003699          397 LFFSYPSGTLRPLAIELTRPPMDGKP--QWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIA  474 (802)
Q Consensus       397 Lffl~~~g~L~PiAIqL~~~~~~~~~--~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~iA  474 (802)
                      |||++++|+|+||||||+++++++++  +.++||||+|+++++|.|+|||+||++||+++||+++||++||+++|||+||
T Consensus       448 Lffl~~dG~L~PlAIqL~~~~~~~~~~~~~~~VftP~dd~~~~~~W~lAK~~v~~aD~~~HqlisHll~THlv~Epf~IA  527 (853)
T 2iuj_A          448 IFFLKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACYHQIISHWLNTHAVVEPFVIA  527 (853)
T ss_dssp             EEEECTTSCEEEEEEEEEECCTTCGGGCCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHH
T ss_pred             EEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99987999675799996469987765667787589888777750899999999988888999987551025778999999


Q ss_pred             HHCCCCCCCCHHHCCCCCHHHHHHCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCC
Q ss_conf             60347866842120431013220016999860336885112245784469999999971167788777745788579987
Q 003699          475 TNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMAV  554 (802)
Q Consensus       475 t~R~Ls~~HPI~kLL~PHfr~tl~IN~~AR~~Li~~gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~  554 (802)
                      |+||||.+|||||||.||||+||+||++||+.||++||++|++|++|.++++|++++|+. |+|++++||+||++|||++
T Consensus       528 t~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~el~s~~yk~-w~f~~~~LP~DL~~RGv~~  606 (853)
T 2iuj_A          528 TNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGIIEKTFLWGRYSLEMSAVIYKD-WVFTDQALPNDLVKRGVAV  606 (853)
T ss_dssp             HHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTCHHHHHSTTGGGHHHHHHHHHTT-CCSGGGSHHHHHHHHTSEE
T ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC-CCCCCCCCCHHHHHCCCCC
T ss_conf             722488668416553688886888889999743188875002025760069999999715-7774244858888569877


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf             89999854333555784412128999999997986441026656676678789999999984057888999999988995
Q 003699          555 EDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTP  634 (802)
Q Consensus       555 ~D~~~~~g~~~~l~~YpYrdDgl~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~l~t~  634 (802)
                      +|+++|||+++.||+||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+|+
T Consensus       607 ~D~~~p~gl~l~i~dYpYadDgL~iW~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~P~l~T~  686 (853)
T 2iuj_A          607 KDPSAPHGVRLLIEDYPYASDGLEIWDAIKSWVEEYVSFYYKSDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTR  686 (853)
T ss_dssp             ECTTSTTSEEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHTTCHHHHHHHHHHHHTTTGGGTTCTTSCCSCSH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
T ss_conf             77777653001366787641279999999999999999864881101588899999999981577776667888776679


Q ss_pred             HHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHH
Q ss_conf             67999874520013332111135663113125996321377899999996468864118277897219996899999999
Q 003699          635 EDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAI  714 (802)
Q Consensus       635 ~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~  714 (802)
                      ++||++||+|||+||+||||||||||+|+||+||+|++||+|||+  ||..++++|+.++++++|++||++.||+.+|++
T Consensus       687 ~eLi~~lT~iIf~aSaqHAAVNfgQydy~gfvPN~P~~~r~p~P~--~g~~~~~~l~~~~e~~~L~tLP~~~qa~~~m~l  764 (853)
T 2iuj_A          687 EELVEASATLIWIASALHAAVNFGQYPYGGLILNRPTISRRFMPE--KGSPEYDALAKNPEKEFLKTITGKKETLIDLTI  764 (853)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSHHHHSSTTTSCCCBCSCCCC--SSCHHHHHHHHCHHHHHHTTBCCHHHHHHHHHH
T ss_pred             HHHHHHHHEEEECCCCHHHHHCCCCCCHHCCCCCCCHHHCCCCCC--CCCHHHHHHHHCHHHHHHHHCCCHHHHHHHHHH
T ss_conf             999988645534244214544037440004467887554679999--984336655317099998868879999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf             98513899997422465777-88993789999999999999999999874056100025798667810003799999876
Q 003699          715 LDTLSSHSPDEEYLGKQMEQ-AWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTG  793 (802)
Q Consensus       715 ~~~LS~~~~de~~LG~~~~~-~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~~~~~~PY~yL~P~~~~g~t~  793 (802)
                      +|+||+|++||+|||+|+++ .|++|+++++|+++|+++|++||+.|++||++++||||+|||++||+||+|+++|||||
T Consensus       765 ~~lLS~~~~de~yLG~~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P~s~~g~t~  844 (853)
T 2iuj_A          765 IEILSRHASDEFYLGQRDGGDYWTSDAGPLEAFKRFGKNLEEIEKKLIEKNNDETLRNRYGPAKMPYTLLYPSSEEGLTF  844 (853)
T ss_dssp             HHHTTCBCTTCCBTTTCSSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCGGGTTTTTCCCCTTCSCCCSBSCS
T ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECCCCCCCCCC
T ss_conf             99973799886515655763112368789999999999999999999998568033224788888813568888788665


Q ss_pred             CCCCCCCCC
Q ss_conf             887753349
Q 003699          794 QGVPYSISI  802 (802)
Q Consensus       794 ~~IpnSIsI  802 (802)
                      |||||||||
T Consensus       845 ~~IPNSIsI  853 (853)
T 2iuj_A          845 RGIPNSISI  853 (853)
T ss_dssp             CCCBSSCCC
T ss_pred             CCCCCCCCC
T ss_conf             787873569


No 3  
>1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ...
Probab=1.00  E-value=1  Score=1929.05  Aligned_cols=784  Identities=43%  Similarity=0.797  Sum_probs=748.1

Q ss_pred             EEEEEEECCCCCCCC----CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEEECCCCC-CC
Q ss_conf             889852138989975----5203663347889987289999984489999527999996889942321389816999-83
Q 003699            6 YFVQINIYSETGAEK----PTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRN-GP   80 (802)
Q Consensus         6 ~~vs~~~~~~tg~~k----~~~~~~~~~~~~~~~~~~~y~~~f~v~~~fG~pgai~v~n~~~~e~~l~~i~v~~~p~-~~   80 (802)
                      -|||+++||+||+||    +.|++|+.......+++++|+++|.|+++||+||||+|+|.|.+||||++|+|+++|. |.
T Consensus        43 ~lvs~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pga~~v~n~~~~e~~l~~~~l~~~~~~~~  122 (839)
T 1f8n_A           43 QLISATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGT  122 (839)
T ss_dssp             EEEEEEEECTTSSEEECCCEECCEEECCCSCCCTTCEEEEEEEECCGGGCCEEEEEEEECSSSCEEEEEEEECC----CC
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCC
T ss_conf             99975348989987678755002435689867777169999998414669850699883798714898999804788875


Q ss_pred             EEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
Q ss_conf             79962565112777964259830651276899956589899999966189988755578276223457799998787766
Q 003699           81 VNITCGSWVQSKHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELA  160 (802)
Q Consensus        81 ~~Fpc~sWV~~~~~~~~~riff~~~~~LP~~tp~~L~~~R~~EL~~~rg~g~g~r~~~driYdy~~yndlG~pd~~~~l~  160 (802)
                      ++|+||||||+.++++.+||||+|++|||++||++|+++|++||+++||||+||||+||||||||+|||||+||++++++
T Consensus       123 ~~f~cnswv~~~~~~~~~riff~n~~ylp~~tp~~l~~~r~~el~~lrG~g~G~rk~~driYdyd~ynDlg~pd~~~~~~  202 (839)
T 1f8n_A          123 IRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLA  202 (839)
T ss_dssp             EEEEEEEEECBGGGCSSCEEEECSCCCCGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGC
T ss_pred             EEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCC
T ss_conf             89861664177878988727525862067789667776669999984068865113312010043431456877674435


Q ss_pred             CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHC--CCCCC
Q ss_conf             446899-889888755789999999999777678885598887672222003454689998645444555311--69999
Q 003699          161 RPVLGG-KEHPYPRRCRTGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAII--DTDLG  237 (802)
Q Consensus       161 rpvlgg-~~~pyprr~rtgr~~~~~~~~~e~~~~~~ylPrDe~Fs~~K~~~f~~~~~~~~~~~~~~~l~~~~~--~~~~~  237 (802)
                      |||||| +++||||||||||+++++||.+|+|++.+||||||+|++.|.++|.+++++++++.++|.++++++  .+..+
T Consensus       203 rpvlggs~~~Pyprr~rtgr~~~~~d~~~e~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~~~~~~~  282 (839)
T 1f8n_A          203 RPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIE  282 (839)
T ss_dssp             CCCBSSSSSSCCCCEECCCCCBCSSCTTSBCCCSSCCCCGGGSCCCSSGGGCGGGHHHHHHHTHHHHHHHHHHTTCSCSS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             65358998888887455699987889986677657788986455732066688889999998768888877415566666


Q ss_pred             CCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf             999888898730798899951356788886454--443301034575211235841332364575352899977740899
Q 003699          238 FPYFTTIDKLFNEGVNVPMPETFKEKALWRTIL--PRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLN  315 (802)
Q Consensus       238 f~sf~di~~ly~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~N  315 (802)
                      |++|+||++||++|++++.       ..++...  +.+.+.+.+.++.++|||+|+++++++++|++|++||||+|||+|
T Consensus       283 f~~f~di~~ly~~g~~l~~-------~~~~~~~p~~~~~~i~~~~~~~~l~~p~P~vi~~~~~~W~~DeeFarQ~LaG~N  355 (839)
T 1f8n_A          283 FHSFQDVHDLYEGGIKLPR-------DVISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVN  355 (839)
T ss_dssp             CCSHHHHHGGGTTCEECCH-------HHHHHHTTSTTGGGSCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSS
T ss_pred             CCCHHHHHHHHHCCCCCCH-------HHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHCHHHHHHHHHHCCC
T ss_conf             6789999977643676704-------554023728899998741542100389851100451211167999999870899


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCEECCCC
Q ss_conf             51100135789889999776799998553999997517955499998549478961663336100100157882000231
Q 003699          316 PYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLYGSR  395 (802)
Q Consensus       316 P~~I~r~~~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~yAp~  395 (802)
                      |++|+||++||++|+|||++||+++|+||++|++  ++| +||++|+++|||||+||||.+||++.++|.++++++|||+
T Consensus       356 P~~I~r~~e~P~~~~ldp~~yg~~~s~it~e~i~--l~g-~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~~~YAp~  432 (839)
T 1f8n_A          356 PCVIRGLEEFPPKSNLDPAIYGDQSSKITADSLD--LDG-YTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATR  432 (839)
T ss_dssp             CSCCEECCSSSCCCCSCHHHHCCCCCCCCGGGCC--CTT-CCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred             CHHHEECCCCCCCCCCCHHHCCCCCCCCCHHHHH--CCC-CCHHHHHHCCCEEEECCHHHHCCCHHHCCCCCCCEEECCE
T ss_conf             6430053117973447765508855634288863--167-5399998659989941515425302321557895313355


Q ss_pred             EEEEECCCCCEEEEEEEECCCCCCCCC--CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf             068536999423589983179999999--986035179999992278999999872100133566654100221247999
Q 003699          396 TLFFSYPSGTLRPLAIELTRPPMDGKP--QWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYII  473 (802)
Q Consensus       396 ~Lffl~~~g~L~PiAIqL~~~~~~~~~--~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~i  473 (802)
                      ||||++++|+|+||||||+++++++++  +.++||||+|+++++|.|+|||+||++||+++||+++||++||+++|||+|
T Consensus       433 tLffl~~dg~L~PlAIqL~~~~~~~~~~~~~~~vftP~dd~~~~~~W~LAK~~v~~aD~~~HqlisHll~THlv~Epf~I  512 (839)
T 1f8n_A          433 TILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVI  512 (839)
T ss_dssp             EEEEECTTSCEEEEEEEEECCCCTTCSCCCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHH
T ss_pred             EEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             78998789977679999647998776567778858988777776089999999998888999998866303577899999


Q ss_pred             HHHCCCCCCCCHHHCCCCCHHHHHHCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC
Q ss_conf             86034786684212043101322001699986033688511224578446999999997116778877774578857998
Q 003699          474 ATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPGKYSMELSSVAYDKHWRFDHEALPKDLISRGMA  553 (802)
Q Consensus       474 At~R~Ls~~HPI~kLL~PHfr~tl~IN~~AR~~Li~~gG~id~~~~~G~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~  553 (802)
                      ||+||||.+|||||||.||||+||+||++||+.||++||++|++|++|.++++|++++|++ |+|++++||+||++|||+
T Consensus       513 At~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~gGiie~~fs~g~~~~el~s~~yk~-w~f~~~~lP~DL~~RG~~  591 (839)
T 1f8n_A          513 ATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVYKN-WVFTDQALPADLIKRGVA  591 (839)
T ss_dssp             HHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTT-CCGGGGSHHHHHHHTTSE
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHCC-CCCCCCCCCHHHHHCCCC
T ss_conf             9711388658467777799999988889999733188871223205761069999999725-777313384888866987


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             78999985433355578441212899999999798644102665667667878999999998405788899999998899
Q 003699          554 VEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKT  633 (802)
Q Consensus       554 ~~D~~~~~g~~~~l~~YpYrdDgl~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~l~t  633 (802)
                      ++|+++|||+++.||+||||+|||+||+||++||++||++||++|++|++|.|||+||+||+++||+++++.+|||+|+|
T Consensus       592 ~~D~~~p~gl~l~ipdYpYadDgL~iW~AIk~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T  671 (839)
T 1f8n_A          592 IKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQT  671 (839)
T ss_dssp             EECTTSTTSEEESSTTCHHHHHHHHHHHHHHHHHHHHGGGTCCSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTCCCCCS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             77777765400026788642007999999999999999987498033137899999999997057877777888877667


Q ss_pred             HHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHH
Q ss_conf             56799987452001333211113566311312599632137789999999646886411827789721999689999999
Q 003699          634 PEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMA  713 (802)
Q Consensus       634 ~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~  713 (802)
                      +++||++||+|||+||+||||||||||+|+||+||+|++||+|||+  ||..++++++.+|++++|++||++.||+.+|+
T Consensus       672 ~~~Li~~lT~iIf~aSaqHAAVNfgQydy~gfvPN~P~~~r~p~P~--~g~~~~~~l~~~~e~~~L~tLP~~~qa~~~m~  749 (839)
T 1f8n_A          672 LEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPE--KGTPEYEEMINNHEKAYLRTITSKLPTLISLS  749 (839)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHTTHHHHHTSTTTSCSCBCSCCCC--TTSHHHHHHHHCHHHHHHHHBCCHHHHHHHHH
T ss_pred             HHHHHHHHHEEEECCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCC--CCCHHHHHHHHCHHHHHHHHCCCHHHHHHHHH
T ss_conf             9999998652212144114544037451004267887665678999--98544766543669999887888999999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCEEECCCCCCCCC
Q ss_conf             998513899997422465777889937899999999999999999998740561000-2579866781000379999987
Q 003699          714 ILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLK-NRTGAGMVPYELMKPFSEPGVT  792 (802)
Q Consensus       714 ~~~~LS~~~~de~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~-~r~~~~~~PY~yL~P~~~~g~t  792 (802)
                      ++++||+|++||+|||+|++++|++|+++++|+++|+++|++||+.|++||+++++| ||+|||++||+||+|+++||||
T Consensus       750 l~~lLS~~~~de~yLG~~~~~~~~~d~~~~~a~~rF~~~L~~Ie~~I~~RN~d~~lk~nr~g~~~~PY~~L~P~s~~g~t  829 (839)
T 1f8n_A          750 VIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEEGLT  829 (839)
T ss_dssp             HHHHHTCBCTTCCBTTCCSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCSCCCSBSC
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEECCCCCCCCC
T ss_conf             99998527987533566575233358789999999999999999999998657202212578877771015888878866


Q ss_pred             CCCCCCCCCC
Q ss_conf             6887753349
Q 003699          793 GQGVPYSISI  802 (802)
Q Consensus       793 ~~~IpnSIsI  802 (802)
                      ||||||||||
T Consensus       830 ~~~IPNSIsI  839 (839)
T 1f8n_A          830 FRGIPNSISI  839 (839)
T ss_dssp             SCCCBSSCCC
T ss_pred             CCCCCCCCCC
T ss_conf             5787883579


No 4  
>1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A*
Probab=1.00  E-value=1  Score=1360.78  Aligned_cols=613  Identities=25%  Similarity=0.405  Sum_probs=554.8

Q ss_pred             CCCCCCCEEEEEEEECCCCCCCEEEEEEEECCC---CCEEEEEEEECCCCC--C-CEEEEECCCCCCCCCCCCCEEEEEC
Q ss_conf             889987289999984489999527999996889---942321389816999--8-3799625651127779642598306
Q 003699           31 GEDKDGHIIYESKFEVPPSFGEVGAILVENEHH---KEMYLNDIVLDGPRN--G-PVNITCGSWVQSKHVNKQKRIFFTN  104 (802)
Q Consensus        31 ~~~~~~~~~y~~~f~v~~~fG~pgai~v~n~~~---~e~~l~~i~v~~~p~--~-~~~Fpc~sWV~~~~~~~~~riff~~  104 (802)
                      .......++|.++  ++.++|+|++|+|+|++.   ++|||++|+|++ |+  | .++|||||||++     .+||||+|
T Consensus        39 ~FerG~~d~F~v~--~~~dlG~l~~I~I~~d~~g~~~~Wfl~~V~V~~-p~~~g~~~~F~Cn~WL~~-----~~rvff~~  110 (662)
T 1lox_A           39 RPTRNKEEEFKVN--VSKYLGSLLFVRLRKKHFLKEDAWFCNWISVQA-LGAAEDKYWFPCYRWVVG-----DGVQSLPV  110 (662)
T ss_dssp             CCCTTCEEEEEEE--CSSCCCSEEEEEEEEECSSSCCCEEEEEEEEEE-SSSCCCCEEEEEEEEECS-----SCCEEEEC
T ss_pred             CCCCCCCCEEEEE--ECCCCCCCEEEEEEECCCCCCCCCEEEEEEEEC-CCCCCCEEEEEECEEECC-----CCEEEEEC
T ss_conf             7379992189998--237788652899995899999872884899943-898995799982207557-----98799706


Q ss_pred             -CCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             -5127689-99565898999999661899887555782762234577999987877664468998898887557899999
Q 003699          105 -KSYLPSQ-TPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPC  182 (802)
Q Consensus       105 -~~~LP~~-tp~~L~~~R~~EL~~~rg~g~g~r~~~driYdy~~yndlG~pd~~~~l~rpvlgg~~~pyprr~rtgr~~~  182 (802)
                       ++|||++ ||++|+++|++||+++|           |+|||++|||                            |||++
T Consensus       111 G~~~Lp~~D~~~~l~~~R~~eL~~~~-----------~~Y~~~~y~d----------------------------G~p~~  151 (662)
T 1lox_A          111 GTGCTTVGDPQGLFQKHREQELEERR-----------KLYQWGSWKE----------------------------GLILN  151 (662)
T ss_dssp             TTCCCSTTCTTCTTHHHHHHHHHHHH-----------HHSCEECSST----------------------------TSCCE
T ss_pred             CCEEEECCCCCHHHHHHHHHHHHHHH-----------CEEEECCCCC----------------------------CCCCC
T ss_conf             74054025577066665399998630-----------5774067579----------------------------99654


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf             99999777678885598887672222003454689998645444555311699999998888987307988999513567
Q 003699          183 ETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKE  262 (802)
Q Consensus       183 ~~~~~~e~~~~~~ylPrDe~Fs~~K~~~f~~~~~~~~~~~~~~~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~  262 (802)
                      . ||.+.     .||||||+|++.|..+|..++++++++.++   +++++ ...+|++|+||++||..+ ..+       
T Consensus       152 ~-d~~~~-----~~lP~de~f~~~k~~~f~~~~~~~~~~~~~---~~~~~-~~~~~~s~~d~~~lf~~~-~~~-------  213 (662)
T 1lox_A          152 V-AGSKL-----TDLPVDERFLEDKKIDFEASLAWGLAELAL---KNSLN-ILAPWKTLDDFNRIFWCG-RSK-------  213 (662)
T ss_dssp             E-SCSSG-----GGSCGGGSCCHHHHHHHC-----------C---HHHHG-GGSCCSSGGGGGGSC--C-CCH-------
T ss_pred             C-CCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHH---HHHHC-CCCCCCCHHHHHHHHHCC-CCC-------
T ss_conf             5-75544-----569941023742033455656888999999---99860-578866799999874225-665-------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88886454443301034575211235841332364575352899977740899511001357898899997767999985
Q 003699          263 KALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESA  342 (802)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~NP~~I~r~~~~P~~~~l~~~~~g~~~~~  342 (802)
                                +.+++                   ..+|++|++||||+|||+||++|+||+++|++            |+
T Consensus       214 ----------~~~~~-------------------~~~W~~D~~F~~q~L~G~NP~~I~~~~~~p~~------------~~  252 (662)
T 1lox_A          214 ----------LARRV-------------------RDSWQEDSLFGYQFLNGANPMLLRRSVQLPAR------------LV  252 (662)
T ss_dssp             ----------HHHHH-------------------HHHTTCHHHHHHHHHHSSCTTSCEECSSCCTT------------CC
T ss_pred             ----------CCHHH-------------------HHHHCCCHHHHHHHHCCCCCHHEEECCCCCCC------------CC
T ss_conf             ----------30345-------------------54320609999998648996200244668743------------67


Q ss_pred             CCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCEEC--CCCEEEEECCCCCEEEEEEEECCCCCCC
Q ss_conf             53999997517955499998549478961663336100100157882000--2310685369994235899831799999
Q 003699          343 ITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLY--GSRTLFFSYPSGTLRPLAIELTRPPMDG  420 (802)
Q Consensus       343 vt~~~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~y--Ap~~Lffl~~~g~L~PiAIqL~~~~~~~  420 (802)
                      ||++|++   +| +||++|+++||||++||++  |+.+ ++|.++++++|  ||+||||++++|+|+||||||+.|....
T Consensus       253 vt~~~v~---~g-~tl~~a~~~~~lfi~Dy~~--l~~~-~~~~~~~~~~y~~Ap~~lf~l~~~g~L~PlAIql~~p~~~~  325 (662)
T 1lox_A          253 FPPGMEE---LQ-AQLEKELKAGTLFEADFAL--LDNI-KANVILYCQQYLAAPLVMLKLQPDGKLMPMVIQLHLPKIGS  325 (662)
T ss_dssp             CCTTCHH---HH-HHHHHHHHTTCEEEEECGG--GTTC-CCCEETTEECCCCCCEEEEEECTTSCEEEEEEECSCCCTTS
T ss_pred             CCHHHHC---CC-CCHHHHHHCCCEEEEECHH--HCCC-CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCC
T ss_conf             9988956---78-7799998649889983243--3547-66655776331115469999889997867999973798877


Q ss_pred             CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCH
Q ss_conf             99986035179999992278999999872100133566654100221247999860347866842120431013220016
Q 003699          421 KPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEIN  500 (802)
Q Consensus       421 ~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~iAt~R~Ls~~HPI~kLL~PHfr~tl~IN  500 (802)
                      +  ..+||||+|   ++|.|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||
T Consensus       326 ~--~~~vftP~d---~~~~W~lAK~~v~~~D~~~Hqli~Hll~TH~~~E~~~iAt~R~Ls~~HPi~kLL~PH~r~tl~IN  400 (662)
T 1lox_A          326 S--PPPLFLPTD---PPMVWLLAKCWVRSSDFQVHELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEIN  400 (662)
T ss_dssp             C--CCCEECTTS---CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHCCTTSHHHHHHGGGGTTHHHHH
T ss_pred             C--CCCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             8--887687899---96389999999997788888888876456777889999862258865741243347887688777


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCHHH-HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             999860336885112245784469-9999999711677887777457885799878999985433355578441212899
Q 003699          501 ALAREALVNAGGIIESTFSPGKYS-MELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDL  579 (802)
Q Consensus       501 ~~AR~~Li~~gG~id~~~~~G~~~-~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpYrdDgl~i  579 (802)
                      ++||+.||++||++|++|++|.++ ++|++++|++ |+|++++||+||++|||.            .||+||||+|||+|
T Consensus       401 ~~AR~~Li~~~G~i~~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL~~RG~~------------~i~~YpY~~Dgl~i  467 (662)
T 1lox_A          401 VRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAF-LTYRSFCPPDDLADRGLL------------GVESSFYAQDALRL  467 (662)
T ss_dssp             HHHTTTTSSTTSHHHHHCTTTTTHHHHHHHHHHTT-CCGGGGSHHHHHHHTTCT------------TCTTCHHHHHHHHH
T ss_pred             HHHHHHEECCCCCEEEEECCCCCCHHHHHHHHHCC-CCCCCCCCCHHHHHCCCC------------CCCCCCCCCCHHHH
T ss_conf             99997542888711232058842289999999716-754313576545646766------------56677544248999


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCC
Q ss_conf             99999979864410266566766787899999999840578889999999889956799987452001333211113566
Q 003699          580 WDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQ  659 (802)
Q Consensus       580 W~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~l~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ  659 (802)
                      |+||++||++||++||++|++|++|.|||+||+||+++||+++++.+||++|+|+++|+++||+|||+||+|||||||||
T Consensus       468 W~aI~~~V~~yv~~yY~~d~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~p~~l~t~~~Li~~lT~iI~~aS~~HAAVNfgQ  547 (662)
T 1lox_A          468 WEIISRYVQGIMGLYYKTDEAVRDDLELQSWCREITEIGLQGAQKQGFPTSLQSVAQACHFVTMCIFTCTGQHSSIHLGQ  547 (662)
T ss_dssp             HHHHHHHHHHHHTTTCSSHHHHHTCHHHHHHHHHHHTTTTTSGGGGTCCSSCCSHHHHHHHHHHHHHHTTHHHHHHHTTH
T ss_pred             HHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCHHHHHHCCCC
T ss_conf             99999999999986379800024778999999999855577775689997566599999875343011212466551473


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             31131259963213778999999964688641182778972199968999999999851389999742246577788993
Q 003699          660 YTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDD  739 (802)
Q Consensus       660 ~d~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~~LG~~~~~~~~~d  739 (802)
                      |+|+||+||+|++||+|||++ | .        .+++++|++||++.|++.+|+++++||+|++||+|||+|++ .|+.|
T Consensus       548 ~~y~g~~PN~P~~~r~p~P~~-k-~--------~~~~~~l~~lP~~~~a~~~~~~~~~LS~~~~de~~LG~~~~-~~~~d  616 (662)
T 1lox_A          548 LDWFTWVPNAPCTMRLPPPTT-K-D--------ATLETVMATLPNLKQSSLQMSIVWQLGRDQPIMVPLGQHQE-EYFSG  616 (662)
T ss_dssp             HHHSSSGGGSCSCCSSCCCSS-S-C--------CCHHHHHHHSCCHHHHHHHHHHHHHTT--CCCCCBTTCCCC-CCCCS
T ss_pred             CHHCCCCCCCCHHHCCCCCCC-C-C--------CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCC
T ss_conf             100045668853326799988-8-9--------89889988698788999999999996258877643146773-11258


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             789999999999999999999874056100025798667810003799999876887753349
Q 003699          740 PVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  802 (802)
Q Consensus       740 ~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~~~~~~PY~yL~P~~~~g~t~~~IpnSIsI  802 (802)
                      +++++|+++|+++|++||+.|++||+++         .+||+||+|+        +|||||||
T Consensus       617 ~~~~~a~~~F~~~L~~ie~~I~~rN~~~---------~~PY~~L~P~--------~ipnSisI  662 (662)
T 1lox_A          617 PEPRAVLEKFREELAIMDKEIEVRNEKL---------DIPYEYLRPS--------IVENSVAI  662 (662)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSCCCTTCTT--------TSBSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCC---------CCCCEEECCC--------CCCCCCCC
T ss_conf             7899999999999999999999970799---------9882247988--------98763139


No 5  
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}
Probab=1.00  E-value=1  Score=1318.40  Aligned_cols=617  Identities=25%  Similarity=0.463  Sum_probs=553.6

Q ss_pred             CCCEEEEEEEECCCCCCCEEEEEEEECC------CCCEEEEEEEECCCCCC-CEEEEECCCCCCCCCCCCCEEEEECCCC
Q ss_conf             8728999998448999952799999688------99423213898169998-3799625651127779642598306512
Q 003699           35 DGHIIYESKFEVPPSFGEVGAILVENEH------HKEMYLNDIVLDGPRNG-PVNITCGSWVQSKHVNKQKRIFFTNKSY  107 (802)
Q Consensus        35 ~~~~~y~~~f~v~~~fG~pgai~v~n~~------~~e~~l~~i~v~~~p~~-~~~Fpc~sWV~~~~~~~~~riff~~~~~  107 (802)
                      ...++|.++  + .++|++..|+|+.+.      .+.|||+.|+|....+| .++||||+|+...      ..+-.++|+
T Consensus       421 Gs~d~F~v~--~-~~LG~L~~IrI~hDnsG~~~~~~~Wfl~~V~V~~~~tg~~~~Fpc~rWL~~d------~~lr~G~a~  491 (1066)
T 3dy5_A          421 GSKEQYTVQ--G-FDVGDIQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKD------MVLFPGEAT  491 (1066)
T ss_dssp             TCEEEEEEE--C-SCCSSEEEEEEECCCCC--CCCCCEEEEEEEEEESSSSSCEEEEEEEEESSE------EEECCSSCC
T ss_pred             CCCCEEEEE--E-ECCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEEHHHHCCCC------EEECCCCEE
T ss_conf             871269999--7-1378733899997898877789973886899983899978997602405677------175367214


Q ss_pred             CCCCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             76899-95658989999996618998875557827622345779999878776644689988988875578999999999
Q 003699          108 LPSQT-PNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCETDP  186 (802)
Q Consensus       108 LP~~t-p~~L~~~R~~EL~~~rg~g~g~r~~~driYdy~~yndlG~pd~~~~l~rpvlgg~~~pyprr~rtgr~~~~~~~  186 (802)
                      ||+++ .+.|+++|++||+++|.           .|+|+.|.+ |.|       +++.+.                    
T Consensus       492 l~~~d~~p~~~~~R~~EL~~rr~-----------~Y~w~~~~~-g~p-------~~~~~~--------------------  532 (1066)
T 3dy5_A          492 LPFNEVPAIVSEQRQKELEQRKL-----------TYQWDYVSD-DMP-------GNIKAK--------------------  532 (1066)
T ss_dssp             CSCSCCCHHHHHHHHHHHHHHHH-----------HSCEECSST-TSC-------CEECCS--------------------
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHH-----------HEECCCCCC-CCC-------CCCCCC--------------------
T ss_conf             04567776899999999998775-----------430676789-986-------411445--------------------


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
Q ss_conf             97776788855988876722220034546899986454445553116999999988889873079889995135678888
Q 003699          187 ASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALW  266 (802)
Q Consensus       187 ~~e~~~~~~ylPrDe~Fs~~K~~~f~~~~~~~~~~~~~~~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~  266 (802)
                            ...+||+|+||+..|..+|..+..++++...+   +++++. ..+|++|+||++||+.+ +++           
T Consensus       533 ------~~~~LP~~~~f~~~k~~~~~~~~~~~~~~~~~---~~~~~~-~~~w~~l~d~~~~f~~~-~~~-----------  590 (1066)
T 3dy5_A          533 ------THDDLPRDVQFTDEKSRSYQESRKAALVNLGI---GSLFTM-FENWDSYDDYHILYRNW-ILG-----------  590 (1066)
T ss_dssp             ------STTTSCGGGSCCHHHHHHHHHHHHHHHTGGGT---SCC------------------------------------
T ss_pred             ------CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH---HHHHHH-CCCCCCHHHHHHHHCCC-CCC-----------
T ss_conf             ------42128800030022002467777788876434---334422-03646799999984678-878-----------


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             64544433010345752112358413323645753528999777408995110013578988999977679999855399
Q 003699          267 RTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKE  346 (802)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~NP~~I~r~~~~P~~~~l~~~~~g~~~~~vt~~  346 (802)
                            +++++                   .++|++|++||||+|||+||++||||+++|++            |+||++
T Consensus       591 ------~~~~v-------------------~~~W~~D~~F~~Q~L~G~NP~~I~r~~~~P~~------------~~vt~~  633 (1066)
T 3dy5_A          591 ------GTPNM-------------------ADRWHEDRWFGYQFLNGANPVILTRCDALPSN------------FPVTNE  633 (1066)
T ss_dssp             ---------------------------------CCSHHHHHHHHHTTSCCSSEEECSSCCTT------------CCCCTT
T ss_pred             ------CCHHH-------------------HHHCCCHHHHHHHHHCCCCCCEEEECCCCCCC------------CCCCHH
T ss_conf             ------78778-------------------65503859999987648998137872346745------------678889


Q ss_pred             HHHHHHCCCCCHHHHHHCCCEEEECCCCC--CC----CHHHHC------CCCCCCE--EC--CCCEEEEECCCCCEEEEE
Q ss_conf             99975179554999985494789616633--36----100100------1578820--00--231068536999423589
Q 003699          347 LIEKEIGGIMTVEEAIKQKKLFILDYHDL--LL----PYVEKV------RELKGTT--LY--GSRTLFFSYPSGTLRPLA  410 (802)
Q Consensus       347 ~i~~~l~g~~tl~~al~~grLFi~Dy~~~--~l----p~~~~~------n~~~g~~--~y--Ap~~Lffl~~~g~L~PiA  410 (802)
                      |++..|++++||++|+++|||||+||+++  ++    ||+.++      |.+++++  +|  ||+||||++++|+|+|||
T Consensus       634 ~v~~~l~~g~tl~~al~~grLfi~Dy~~l~~~~~~~~p~~~~i~~~~~~n~~~~~~~~~y~~Ap~~Lf~l~~~g~L~PlA  713 (1066)
T 3dy5_A          634 HVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKLGHLMPIA  713 (1066)
T ss_dssp             TTTTTCCSSSCSHHHHTTSCEEEEECGGGTTCCCSSSCCCCTTC----------CCCCCBCCCCEEEEEECTTSCEEEEE
T ss_pred             HHHHHCCCCCCHHHHHHCCCEEEEECHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCEEEEE
T ss_conf             99865068987999987599999964554332434552010002223445457765541413757999985899861499


Q ss_pred             EEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCC
Q ss_conf             98317999999998603517999999227899999987210013356665410022124799986034786684212043
Q 003699          411 IELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQ  490 (802)
Q Consensus       411 IqL~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~iAt~R~Ls~~HPI~kLL~  490 (802)
                      |||+|+|++.    ++||||+|+  ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.
T Consensus       714 IqL~~~p~~~----~piftP~d~--~~~~W~lAK~~v~~~D~~~Hqlv~Hll~THlv~E~f~iAt~R~Ls~~HPi~kLL~  787 (1066)
T 3dy5_A          714 IQINQEPGPE----NPIWTPHEE--NEHDWMMAKFWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQ  787 (1066)
T ss_dssp             EESSSSCSSS----SCEECTTCS--SHHHHHHHHHHHHHHHHHHHHTCCCCCTTTHHHHHHHHHHHHHCCTTCHHHHHHH
T ss_pred             EEEECCCCCC----CCEECCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
T ss_conf             9974799998----975778999--8656999999997557888888888730257789999997413997674455440


Q ss_pred             CCHHHHHHCHHHHHHHCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             1013220016999860336885112245784-469999999971167788777745788579987899998543335557
Q 003699          491 PHFRYTMEINALAREALVNAGGIIESTFSPG-KYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIED  569 (802)
Q Consensus       491 PHfr~tl~IN~~AR~~Li~~gG~id~~~~~G-~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~  569 (802)
                      ||||+||+||++||+.||++||+||+++++| +++++|++++|++ |+|++++||+||++|||+++  +       .||+
T Consensus       788 PH~r~Tl~IN~~AR~~Li~~gG~id~~~~~g~~~~~~l~~~~y~~-~~f~~~~lP~dL~~RG~~~~--~-------~l~~  857 (1066)
T 3dy5_A          788 PHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKE-VNLQDYHLPNALKKRGVDDP--S-------KLPG  857 (1066)
T ss_dssp             HHHTTHHHHHHHTTTTTSSTTSSTTTSSSSTTTHHHHHHHHHHTT-CCGGGGCHHHHHHHTTCCCT--T-------TSCC
T ss_pred             HHHHHHHCCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHC-CEECCCCCCHHHHHCCCCCC--C-------CCCC
T ss_conf             666404113679895232899720244237752699999999833-72156778424665589773--3-------3689


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---CCCCCCCCCC-CCCCHHHHHHHHHHHE
Q ss_conf             84412128999999997986441026656676678789999999984057---8889999999-8899567999874520
Q 003699          570 YPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGH---ADKKDEPWWP-VLKTPEDLIDIITTIA  645 (802)
Q Consensus       570 YpYrdDgl~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~---~d~~~~~g~p-~l~t~~~Lv~~lT~iI  645 (802)
                      ||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||   ++.++. ||| +|+|+++||++||+||
T Consensus       858 YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~-g~P~~l~t~~~Lv~~lT~iI  936 (1066)
T 3dy5_A          858 FYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDH-GVPASFESREQLKEVLTSLV  936 (1066)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHTTSCCCTTCCCC-CCCSSCCSHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHEEH
T ss_conf             82477699999999999999998638995020578999999999963466656777655-56655788999998874512


Q ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             01333211113566311312599632137789999999646886411827789721999689999999998513899997
Q 003699          646 WVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDE  725 (802)
Q Consensus       646 f~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de  725 (802)
                      |+||+||||||||||+|+||+||+|++||+|||++ ||..        +++++|++||++.+++.+|+++|+||+|++|+
T Consensus       937 ~~aS~qHAAVNfgQ~~~~~~~PN~P~~~r~p~P~~-kg~~--------~~~~~l~~LP~~~~~~~~~~~~~~LS~~~~de 1007 (1066)
T 3dy5_A          937 FTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKK-KGEA--------TLQSILSTLPSKSQAAKAIATVYILTKFSEDE 1007 (1066)
T ss_dssp             HHHTHHHHHHHSTTC-------CCCSCBSSCCCSS-TTCC--------CHHHHHHHSCCHHHHHHHHHHHHHHTCCCTTC
T ss_pred             HHCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCC-CCCC--------CHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf             01240233104575520114688854436899989-8888--------87779876899044089999999855788886


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             42246577788993789999999999999999999874056100025798667810003799999876887753349
Q 003699          726 EYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  802 (802)
Q Consensus       726 ~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~~~~~~PY~yL~P~~~~g~t~~~IpnSIsI  802 (802)
                      +|||+|++++|+ |+++++|+++|+++|++||+.|++||+++         .+||+||+|+        +|||||||
T Consensus      1008 ~~Lg~y~~~~~~-d~~~~~a~~~F~~~L~~i~~~I~~RN~~~---------~~pY~~L~P~--------~IpnSIsI 1066 (1066)
T 3dy5_A         1008 RYLGNYSATAWE-DKDALDAINRFQDKLEDISKKIKQRNENL---------EVPYIYLLPE--------RIPNGTAI 1066 (1066)
T ss_dssp             CBTTCCTTSCCC-SHHHHHHHHHHHHHHHHHHHHHHHHTTSC---------SSCCCTTSTT--------SCBSSCCC
T ss_pred             CCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC--------CCCCEEEC
T ss_conf             230357841137-88999999999999999999999971799---------9884007988--------88763059


No 6  
>3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B
Probab=1.00  E-value=1  Score=1316.19  Aligned_cols=616  Identities=27%  Similarity=0.463  Sum_probs=554.7

Q ss_pred             CCCEEEEEEEECCCCCCCEEEEEEEECC---CCCEEEEEEEECCCCCC-CEEEEECCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf             8728999998448999952799999688---99423213898169998-3799625651127779642598306512768
Q 003699           35 DGHIIYESKFEVPPSFGEVGAILVENEH---HKEMYLNDIVLDGPRNG-PVNITCGSWVQSKHVNKQKRIFFTNKSYLPS  110 (802)
Q Consensus        35 ~~~~~y~~~f~v~~~fG~pgai~v~n~~---~~e~~l~~i~v~~~p~~-~~~Fpc~sWV~~~~~~~~~riff~~~~~LP~  110 (802)
                      ...++|.++  ++.++|++..|+|+.+.   ...|||+.|+|.. +.| .++||||+|+...+    ...+-.++|+||+
T Consensus        66 G~~D~F~v~--~~~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~~-~~g~~~~Fpc~rWL~~d~----~l~l~~g~a~~~~  138 (691)
T 3v98_A           66 GAVDSYDVT--VDEELGEIQLVRIEKRKYGSNDDWYLKYITLKT-PHGDYIEFPCYRWITGDV----EVVLRDGRAKLAR  138 (691)
T ss_dssp             TCEEEEEEC--CSSCCCSEEEEEEEEECSSSCCCEEEEEEEEEC-TTSCEEEEEEEEEECSSS----CEEEECSSCCCGG
T ss_pred             CCEEEEEEE--ECCCCCCCEEEEEEECCCCCCCCEEEEEEEEEC-CCCCEEEEEHHHHCCCCC----EEEECCCCEEECC
T ss_conf             976599998--036778855999997898799985870799987-999589976478318997----7997177225014


Q ss_pred             C-CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9-995658989999996618998875557827622345779999878776644689988988875578999999999977
Q 003699          111 Q-TPNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCETDPASE  189 (802)
Q Consensus       111 ~-tp~~L~~~R~~EL~~~rg~g~g~r~~~driYdy~~yndlG~pd~~~~l~rpvlgg~~~pyprr~rtgr~~~~~~~~~e  189 (802)
                      + +.+.|+++|++||+++|.           .|+|+.|.+ |.|       +.+.+.                     + 
T Consensus       139 ~d~~~~~~~~R~~El~~r~~-----------~y~W~~~~~-G~p-------~~i~~~---------------------~-  177 (691)
T 3v98_A          139 DDQIHILKQHRRKELETRQK-----------QYRWMEWNP-GFP-------LSIDAK---------------------C-  177 (691)
T ss_dssp             GCCSHHHHHHHHHHHHHHHH-----------HSCEECSST-TSC-------CEESCS---------------------S-
T ss_pred             CCCCHHHHHHHHHHHHHHHH-----------HCCCCCCCC-CCC-------CCCCCC---------------------C-
T ss_conf             57787999999999999886-----------503788889-996-------511557---------------------6-


Q ss_pred             CCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             76788855988876722220034546899986454445553116999999988889873079889995135678888645
Q 003699          190 SRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTI  269 (802)
Q Consensus       190 ~~~~~~ylPrDe~Fs~~K~~~f~~~~~~~~~~~~~~~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~~~  269 (802)
                          ..+||+|+||+..|..+|..+..+++++..+   +++++....+|++|+||+++|... +++              
T Consensus       178 ----~~~Lp~~~~f~~~k~~~f~~~~~~~~~~~~l---~~~~~~~~~~w~~l~D~~~if~~~-~~~--------------  235 (691)
T 3v98_A          178 ----HKDLPRDIQFDSEKGVDFVLNYSKAMENLFI---NRFMHMFQSSWNDFADFEKIFVKI-SNT--------------  235 (691)
T ss_dssp             ----GGGSCGGGSCSSSSSSCHHHHHHHHHHHTTC---GGGTTCTTCCCSSHHHHHHHHTTT-CCH--------------
T ss_pred             ----CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHH---CCHHHHCCCCCCCHHHHHHHHCCC-CCC--------------
T ss_conf             ----0018800031101020256666777776301---003543147868899999981788-888--------------


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             44433010345752112358413323645753528999777408995110013578988999977679999855399999
Q 003699          270 LPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIE  349 (802)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~NP~~I~r~~~~P~~~~l~~~~~g~~~~~vt~~~i~  349 (802)
                         +++++                   .++|++|++||||+|||+||++||||+++|++            |+||++|++
T Consensus       236 ---~~~~v-------------------~~~W~~D~~F~~Q~LaG~NP~~I~r~~~~P~~------------~~vt~~~v~  281 (691)
T 3v98_A          236 ---ISERV-------------------MNHWQEDLMFGYQFLNGANPVLIRRCTELPEK------------LPVTTEMVE  281 (691)
T ss_dssp             ---HHHHH-------------------HHHTTSHHHHHHHHHHSSCTTSCEECSSCCTT------------CCCCHHHHT
T ss_pred             ---CCHHH-------------------HHHHCCHHHHHHHHHCCCCCCEEEECCCCCCC------------CCCCHHHHH
T ss_conf             ---75767-------------------66502769999988648998016872568856------------899999998


Q ss_pred             HHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCE---ECCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCE
Q ss_conf             75179554999985494789616633361001001578820---002310685369994235899831799999999860
Q 003699          350 KEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTT---LYGSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQ  426 (802)
Q Consensus       350 ~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~---~yAp~~Lffl~~~g~L~PiAIqL~~~~~~~~~~~~~  426 (802)
                      ..|++++||++|+++|||||+||+  +++++ ++|.+++++   .|||+||||++++|+|+||||||+|+|+++    ++
T Consensus       282 ~~l~~g~tl~~al~~grLfi~Dy~--~l~~i-~~n~~~~~~~~y~~Ap~~Lf~l~~~g~L~PlAIqL~~~p~~~----~p  354 (691)
T 3v98_A          282 CSLERQLSLEQEVQQGNIFIVDFE--LLDGI-DANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGDE----NP  354 (691)
T ss_dssp             TTCCSSCCHHHHHHTTCEEEEECG--GGTTC-CCCCSCTTSCCCCCCCEEEEEECTTSCEEEEEEESSSSCBTT----BC
T ss_pred             HHCCCCCCHHHHHHCCCEEEEECH--HHCCC-CCCCCCCCCCCEECCCEEEEEECCCCCEEEEEEEEECCCCCC----CC
T ss_conf             642689869999875999999424--53366-666568863420027579999868997624899961699898----97


Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCHHHHHHH
Q ss_conf             35179999992278999999872100133566654100221247999860347866842120431013220016999860
Q 003699          427 VFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREA  506 (802)
Q Consensus       427 VftP~d~~~~~~~W~LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~iAt~R~Ls~~HPI~kLL~PHfr~tl~IN~~AR~~  506 (802)
                      ||||+|   ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.
T Consensus       355 iftP~d---~~~~W~lAK~~v~~~D~~~Hql~~Hll~THlv~E~f~vAt~R~L~~~HPi~kLL~PH~r~tl~IN~~Ar~~  431 (691)
T 3v98_A          355 IFLPSD---AKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPIFKLLVAHVRFTIAINTKAREQ  431 (691)
T ss_dssp             EECTTS---CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHCCTTSHHHHHHGGGSTTHHHHHHHHHHH
T ss_pred             EECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             573799---95279999999974689999999886113677899999974138876746776357776464211899962


Q ss_pred             CCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             336885112245784-4699999999711677887777457885799878999985433355578441212899999999
Q 003699          507 LVNAGGIIESTFSPG-KYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQ  585 (802)
Q Consensus       507 Li~~gG~id~~~~~G-~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpYrdDgl~iW~AI~~  585 (802)
                      ||++||++|+++++| +++++|++++|++ |+|++++||+||++|||+++|         .||+||||||||+||+||++
T Consensus       432 Li~~gG~i~~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL~~RG~~~~~---------~l~~YpY~dDgl~iW~aI~~  501 (691)
T 3v98_A          432 LICECGLFDKANATGGGGHVQMVQRAMKD-LTYASLCFPEAIKARGMESKE---------DIPYYFYRDDGLLVWEAIRT  501 (691)
T ss_dssp             TSSTTCTHHHHCTTTTTHHHHHHHHHHTT-CCSGGGSHHHHHHHTTCCCTT---------TCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEECCCHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCCCCC---------CCCCCCHHHHHHHHHHHHHH
T ss_conf             30899713455136720499999999844-630656683779866896401---------38898347779999999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCC
Q ss_conf             79864410266566766787899999999840578889999999-88995679998745200133321111356631131
Q 003699          586 WVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWP-VLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGG  664 (802)
Q Consensus       586 ~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p-~l~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~g  664 (802)
                      ||++||++||++|++|++|.|||+||+||+++||++.++. ||| +|+|+++|+++||+|||+||+||||||||||+|+|
T Consensus       502 ~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~-g~P~~l~T~~~Lv~~lT~iIf~aSaqHAAVNfgQ~~y~g  580 (691)
T 3v98_A          502 FTAEVVDIYYEGDQVVEEDPELQDFVNDVYVYGMRGRKSS-GFPKSVKSREQLSEYLTVVIFTASAQHAAVNFGQYDWAS  580 (691)
T ss_dssp             HHHHHHHHHCSSHHHHHTCHHHHHHHHHHHHTTTTTCGGG-CCCSCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHS
T ss_pred             HHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCHHHHHHHHHEEHHHCCCHHHHCCCCCCCEEE
T ss_conf             9999998747983674277999999999973446777555-676567889999988735120124033310457553020


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             25996321377899999996468864118277897219996899999999985138999974224657778899378999
Q 003699          665 YFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKA  744 (802)
Q Consensus       665 f~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~~LG~~~~~~~~~d~~~~~  744 (802)
                      |+||+|++||+|||++ ||..        +++++|++||++.||+.+|+++|+||+|++|++|||+|+++ |+.|+++++
T Consensus       581 ~~PN~P~~~r~p~P~~-kg~~--------~~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~~-~f~d~~~~~  650 (691)
T 3v98_A          581 WIPNAPPTMRAPPPTA-KGVV--------TIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEE-HFIEKPVKE  650 (691)
T ss_dssp             SGGGSCSCCSSCCCCS-SSCC--------CHHHHHHHSCCHHHHHHHHHHHHHHTCCCTTCCBTTCCCSC-SCCCHHHHH
T ss_pred             ECCCCCHHHCCCCCCC-CCCC--------CHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCHHHHH
T ss_conf             3588855546899999-8887--------77789877888788899999999845788887440358841-127879999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             9999999999999999874056100025798667810003799999876887753349
Q 003699          745 AFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  802 (802)
Q Consensus       745 a~~~F~~~L~~i~~~I~~RN~~~~~~~r~~~~~~PY~yL~P~~~~g~t~~~IpnSIsI  802 (802)
                      |+++|+++|++||++|++||+++         .+||+||+|+        +|||||||
T Consensus       651 a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~--------~IpnSIsI  691 (691)
T 3v98_A          651 AMARFRKNLEAIVSVIAERNENL---------QLPYYYLDPD--------RIPNSVAI  691 (691)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTC---------SSCCCTTCGG--------GCBSSCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC--------CCCCEEEC
T ss_conf             99999999999999999972899---------9884007988--------98764159


No 7  
>3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A
Probab=1.00  E-value=1  Score=1308.41  Aligned_cols=620  Identities=25%  Similarity=0.457  Sum_probs=554.2

Q ss_pred             CCCCCCEEEEEEEECCCCCCCEEEEEEEECC------CCCEEEEEEEECCCCCC-CEEEEECCCCCCCCCCCCCEEEEEC
Q ss_conf             8998728999998448999952799999688------99423213898169998-3799625651127779642598306
Q 003699           32 EDKDGHIIYESKFEVPPSFGEVGAILVENEH------HKEMYLNDIVLDGPRNG-PVNITCGSWVQSKHVNKQKRIFFTN  104 (802)
Q Consensus        32 ~~~~~~~~y~~~f~v~~~fG~pgai~v~n~~------~~e~~l~~i~v~~~p~~-~~~Fpc~sWV~~~~~~~~~riff~~  104 (802)
                      ......++|.++  + .++|++..|+|+++.      .+.|||+.|+|....+| .++||||+|+...      ..+-.+
T Consensus        48 FeRGs~d~F~v~--~-~dLG~L~~IrI~hDnsg~G~~~~~Wf~~~V~V~~~~tg~~~~Fpc~rWL~~d------l~lreG  118 (696)
T 3fg1_A           48 FEAGSKEQYTVQ--G-FDVGDIQLIELHSDGGGYWSGDPDWFVNRVIIISSTQDRVYSFPCFRWVIKD------MVLFPG  118 (696)
T ss_dssp             BCTTCEEEEEEE--E-ECCSSEEEEEEEECCCCTTCSCCCEEEEEEEEEETTCSSCEEEEEEEEESSE------EEECCS
T ss_pred             CCCCCCCEEEEE--E-CCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEEEEEHHHHCCCC------EEECCC
T ss_conf             578970379999--7-1488845889997896777778884762799994899958996744614687------075476


Q ss_pred             CCCCCCCCC-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             512768999-5658989999996618998875557827622345779999878776644689988988875578999999
Q 003699          105 KSYLPSQTP-NGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPCE  183 (802)
Q Consensus       105 ~~~LP~~tp-~~L~~~R~~EL~~~rg~g~g~r~~~driYdy~~yndlG~pd~~~~l~rpvlgg~~~pyprr~rtgr~~~~  183 (802)
                      +|+||++++ +.|+++|++||+++|.           .|+|+.|.+ |.|       +.+.+.                 
T Consensus       119 ~a~l~~~d~~~~~~~~R~~el~~r~~-----------~y~w~~~~~-G~p-------~~i~~~-----------------  162 (696)
T 3fg1_A          119 EATLPFNEVPAIVSEQRQKELEQRKL-----------TYQWDYVSD-DMP-------GNIKAK-----------------  162 (696)
T ss_dssp             SCCCTTSCCCHHHHHHHHHHHHHHHH-----------HSCEECSST-TSC-------CEECCS-----------------
T ss_pred             CEECCCCCCCHHHHHHHHHHHHHHHH-----------EECCCCCCC-CCC-------CEECCC-----------------
T ss_conf             32435556638999999999997464-----------040788889-986-------400446-----------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             99997776788855988876722220034546899986454445553116999999988889873079889995135678
Q 003699          184 TDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEK  263 (802)
Q Consensus       184 ~~~~~e~~~~~~ylPrDe~Fs~~K~~~f~~~~~~~~~~~~~~~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~  263 (802)
                          +     ..+||+|+||++.|..+|..+..+++++..+   +++++. ..+|++|+||+++|+.+ +++        
T Consensus       163 ----~-----~~~Lp~~~~f~~~k~~~~~~~~~~~~~~~~~---~~~~~~-~~~w~~l~d~~~~f~~~-~~~--------  220 (696)
T 3fg1_A          163 ----T-----HDDLPRDVQFTDEKSRSYQESRKAALVNLGI---GSLFTM-FENWDSYDDYHILYRNW-ILG--------  220 (696)
T ss_dssp             ----S-----GGGSCGGGSCCHHHHHHHHHHHHHHHHHHHH---HHHHTT-TCCCCSGGGGGGGGTTS-CCS--------
T ss_pred             ----C-----CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH---HHHHHH-CCCCCCHHHHHHHHCCC-CCC--------
T ss_conf             ----5-----0018820121321332156667778876544---434321-46878899999984788-888--------


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             88864544433010345752112358413323645753528999777408995110013578988999977679999855
Q 003699          264 ALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAI  343 (802)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~NP~~I~r~~~~P~~~~l~~~~~g~~~~~v  343 (802)
                               +++++                   .++|++|++||||+|||+||++||||+++|++            |+|
T Consensus       221 ---------~~~~v-------------------~~~W~~D~~F~~Q~L~G~NP~~I~r~~~~P~~------------~~v  260 (696)
T 3fg1_A          221 ---------GTPNM-------------------ADRWHEDRWFGYQFLNGANPVILTRCDALPSN------------FPV  260 (696)
T ss_dssp             ---------SSCTT-------------------TTTTTSHHHHHHHHHHSSCTTSCEECSSCCTT------------SCC
T ss_pred             ---------CCHHH-------------------HHHCCCHHHHHHHHHCCCCCCEEEECCCCCCC------------CCC
T ss_conf             ---------66667-------------------65505859999988648998126874657865------------678


Q ss_pred             CHHHHHHHHCCCCCHHHHHHCCCEEEECCCCC--CCC----HHHHC------CCCCCCE--EC--CCCEEEEECCCCCEE
Q ss_conf             39999975179554999985494789616633--361----00100------1578820--00--231068536999423
Q 003699          344 TKELIEKEIGGIMTVEEAIKQKKLFILDYHDL--LLP----YVEKV------RELKGTT--LY--GSRTLFFSYPSGTLR  407 (802)
Q Consensus       344 t~~~i~~~l~g~~tl~~al~~grLFi~Dy~~~--~lp----~~~~~------n~~~g~~--~y--Ap~~Lffl~~~g~L~  407 (802)
                      |++|++..|++++||++|+++|||||+||+++  +++    +++++      |.+++++  +|  ||+||||++++|+|+
T Consensus       261 t~~~v~~~l~~g~tl~~al~~grLfi~Dy~~l~~~~~~~~~~~~~i~~~~~~n~~~~~~~~~y~~Ap~~Lf~l~~~g~L~  340 (696)
T 3fg1_A          261 TNEHVNASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCAAPLALFYVNKLGHLM  340 (696)
T ss_dssp             CHHHHGGGCCSSCCHHHHHHHTCEEEEECGGGTTCBCTTSCBCBTTBCC--------CCCCCBCCCCEEEEEECTTSCEE
T ss_pred             CHHHHHHHCCCCCCHHHHHHCCCEEEEECHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEE
T ss_conf             78999865069986999987699999965554344654532000002234456457765551211667999986899740


Q ss_pred             EEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHH
Q ss_conf             58998317999999998603517999999227899999987210013356665410022124799986034786684212
Q 003699          408 PLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINR  487 (802)
Q Consensus       408 PiAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~iAt~R~Ls~~HPI~k  487 (802)
                      ||||||+|+|++.    ++||||+|.  ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||
T Consensus       341 PiAIqL~~~p~~~----~piftP~d~--~~~~W~lAK~~v~~~D~~~Hql~~Hll~THlv~E~f~iAt~R~L~~~HPi~k  414 (696)
T 3fg1_A          341 PIAIQINQEPGPE----NPIWTPHEE--NEHDWMMAKFWLGVAESNFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFK  414 (696)
T ss_dssp             EEEEESSSSCBTT----BCEECTTCS--SHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred             EEEEEEECCCCCC----CCEECCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf             3899974699898----974788999--8547999999998668899888887603156789999998512887674566


Q ss_pred             CCCCCHHHHHHCHHHHHHHCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             0431013220016999860336885112245784-469999999971167788777745788579987899998543335
Q 003699          488 LLQPHFRYTMEINALAREALVNAGGIIESTFSPG-KYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLT  566 (802)
Q Consensus       488 LL~PHfr~tl~IN~~AR~~Li~~gG~id~~~~~G-~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~  566 (802)
                      ||.||||+||+||++||+.||++||++|+++++| ++++++++++|++ |+|++++||+||++|||++  ++       .
T Consensus       415 LL~PH~r~tl~IN~~Ar~~Li~~gG~i~~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL~~RG~~~--~~-------~  484 (696)
T 3fg1_A          415 LLQPHIYGVLAIDTIGRKELIGSGGIVDQSLSLGGGGHVTFMEKCFKE-VNLQDYHLPNALKKRGVDD--PS-------K  484 (696)
T ss_dssp             HHHHHHTTHHHHHHHHHHHTTSTTSHHHHHCTTTTTHHHHHHHHHHTT-CCGGGGCHHHHHHHTTCCC--TT-------T
T ss_pred             HHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHC-CEECCCCCCCHHHHCCCCC--CC-------C
T ss_conf             503676525301579895202888710245046730599999999834-6405677841366559987--22-------3


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---CCCCCCCCCC-CCCCHHHHHHHHH
Q ss_conf             55784412128999999997986441026656676678789999999984057---8889999999-8899567999874
Q 003699          567 IEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGH---ADKKDEPWWP-VLKTPEDLIDIIT  642 (802)
Q Consensus       567 l~~YpYrdDgl~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~---~d~~~~~g~p-~l~t~~~Lv~~lT  642 (802)
                      ||+||||||||+||+||++||++||++||++|++|++|.|||+||+||+++||   ++.++. ||| +|+|+++|+++||
T Consensus       485 lp~YpY~~Dgl~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~-g~P~~l~T~~~Li~~lT  563 (696)
T 3fg1_A          485 LPGFYYRDDGLALWEAIETFIGEIIAIFYKNDDDVKRDNEIQSWIYDVHKNGWRVNPGHQDH-GVPASFESREQLKEVLT  563 (696)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHHHTSCCCTTCCCC-CCCSSCCCHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHHHH
T ss_conf             78981588799999999999999888637997210476999999999972677645677654-57655788999998875


Q ss_pred             HHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             52001333211113566311312599632137789999999646886411827789721999689999999998513899
Q 003699          643 TIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHS  722 (802)
Q Consensus       643 ~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~  722 (802)
                      +|||+||+||||||||||+|+||+||+|++||+|||++ ||..        +++++|++||++.||+.+|+++|+||+|+
T Consensus       564 ~iIf~aSaqHAAVNfgQ~~~~g~~PN~P~~~r~p~P~~-kg~~--------~~~~~l~~LP~~~~a~~~~~~~~~LS~~~  634 (696)
T 3fg1_A          564 SLVFTFSCQHAAVNFSQKDHYGFTPNAPAILRHPPPKK-KGEA--------TLQSILSTLPSKSQAAKAIATVYILTKFS  634 (696)
T ss_dssp             HHHHHHTHHHHHHHTTHHHHHSSGGGSCSCBCSCCCSS-SSCC--------CHHHHHHHSCCHHHHHHHHHHHHHHTCCC
T ss_pred             EEHHHCCHHHHHCCCCCCCCEEECCCCCHHHCCCCCCC-CCCC--------CHHHHHHHCCCHHHHHHHHHHHHHHCCCC
T ss_conf             40301140233104575530203578845436899999-8988--------87789876898367589999999854788


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             99742246577788993789999999999999999999874056100025798667810003799999876887753349
Q 003699          723 PDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  802 (802)
Q Consensus       723 ~de~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~~~~~~PY~yL~P~~~~g~t~~~IpnSIsI  802 (802)
                      +||+|||+|++++|+ |+++++|+++|+++|++||++|++||+++         .+||+||+|+        +|||||||
T Consensus       635 ~de~~LG~y~~~~~~-~~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~--------~IpnSIsI  696 (696)
T 3fg1_A          635 EDERYLGNYSATAWE-DKDALDAINRFQDKLEDISKKIKQRNENL---------EVPYIYLLPE--------RIPNGTAI  696 (696)
T ss_dssp             TTCCBTTCCTTCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTC---------SSCCCTTCGG--------GSBSSCCC
T ss_pred             CCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC--------CCCCEEEC
T ss_conf             886330357850337-88999999999999999999999982899---------9884017988--------88762059


No 8  
>3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa}
Probab=1.00  E-value=1  Score=1295.43  Aligned_cols=614  Identities=26%  Similarity=0.478  Sum_probs=547.0

Q ss_pred             CCCCCEEEEEEEECCCCCCCEEEEEEEECC---CCCEEEEEEEECCCCC----C-CEEEEECCCCCCCCCCCCCEEEEEC
Q ss_conf             998728999998448999952799999688---9942321389816999----8-3799625651127779642598306
Q 003699           33 DKDGHIIYESKFEVPPSFGEVGAILVENEH---HKEMYLNDIVLDGPRN----G-PVNITCGSWVQSKHVNKQKRIFFTN  104 (802)
Q Consensus        33 ~~~~~~~y~~~f~v~~~fG~pgai~v~n~~---~~e~~l~~i~v~~~p~----~-~~~Fpc~sWV~~~~~~~~~riff~~  104 (802)
                      .....++|.++  . .++|++..|+|+.+.   .+.|||+.|+|....+    + .++||||+|+...      ..+-.+
T Consensus        66 eRGs~D~F~v~--~-~~LG~L~~IrI~hDnsG~~~~Wfl~~V~V~~~~t~~~~g~~~~Fpc~rWL~~d------~~l~~G  136 (698)
T 3vf1_A           66 ESGGTDTYDQS--G-VDVGEIAMITLKENGFGLKSDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQ------LVVYEG  136 (698)
T ss_dssp             CCCCEEEEEEE--E-CCCSSEEEEEEEECCCSSBCCCEEEEEEEEEECTTTCCEEEEEEEEEEECSSE------EEEECS
T ss_pred             CCCCEEEEEEE--E-CCCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEHHHCCCCC------CEECCC
T ss_conf             45872079998--2-25678447999989987999759869999738877778957997720304688------186677


Q ss_pred             CCCCCCC-CC-HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             5127689-99-565898999999661899887555782762234577999987877664468998898887557899999
Q 003699          105 KSYLPSQ-TP-NGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCRTGRPPC  182 (802)
Q Consensus       105 ~~~LP~~-tp-~~L~~~R~~EL~~~rg~g~g~r~~~driYdy~~yndlG~pd~~~~l~rpvlgg~~~pyprr~rtgr~~~  182 (802)
                      +|+||++ +. +.|+++|++||+++|.           .|+|+     |.|.+.+++++.+.+.                
T Consensus       137 ~a~l~~~d~~~~~~~~~R~~El~~r~~-----------~y~w~-----~~~~~~~G~p~~~~~~----------------  184 (698)
T 3vf1_A          137 KAILPNSKDNVKTIAEQRTKEVSENKK-----------LYKWG-----TDPRYVQDLPGFVDAE----------------  184 (698)
T ss_dssp             SCCCTTSSSCCHHHHHHHHHHHHHHHH-----------HSCBC-----CCGGGSSSSCCCBCCS----------------
T ss_pred             CEECCCCCCCCHHHHHHHHHHHHHHHH-----------HCCCC-----CCCCCCCCCCCEECCC----------------
T ss_conf             403351355666899999999998776-----------20379-----9886589987620567----------------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHH-HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHH
Q ss_conf             999997776788855988876722220034546899-9864544455531169999999888898730798899951356
Q 003699          183 ETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYS-VLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFK  261 (802)
Q Consensus       183 ~~~~~~e~~~~~~ylPrDe~Fs~~K~~~f~~~~~~~-~~~~~~~~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~  261 (802)
                           +     ..+||+|+||+..|..+| .+..++ +++..+   +++++. ..+|++|+||+++|.... ++      
T Consensus       185 -----~-----~~~Lp~~~~f~~~k~~~~-~~~~~~~~~~~~~---~~~~~~-~~~w~~l~d~~~~f~~~~-~~------  242 (698)
T 3vf1_A          185 -----E-----PKSLPKDVQFTDEATSSL-FRVGLADFANLGL---SHLFGI-WDDWDCLEDFRQLITPAI-KS------  242 (698)
T ss_dssp             -----S-----GGGSCGGGSCSSGGGGGS-SCCSHHHHHHTTC---GGGTTC-CCCCSSGGGGGGGCCTTS-TT------
T ss_pred             -----C-----CCCCCHHHCCCCCCCCHH-HHHHHHHHHHHHH---HHHHHH-CCCCCCHHHHHHHHCCCC-CC------
T ss_conf             -----7-----001883232012233326-5543578776442---103320-568678999999845788-87------


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             78888645444330103457521123584133236457535289997774089951100135789889999776799998
Q 003699          262 EKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPES  341 (802)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~NP~~I~r~~~~P~~~~l~~~~~g~~~~  341 (802)
                                 +++++                   .++|++|++||||+|||+||++||||+++|++            |
T Consensus       243 -----------~~~~v-------------------~~~W~~D~~F~~Q~L~G~NP~~I~r~~~~P~~------------~  280 (698)
T 3vf1_A          243 -----------GLPHA-------------------AEYWRDDVWFGSQFLNGSNPEVIRRCDKLPEN------------F  280 (698)
T ss_dssp             -----------CSCTH-------------------HHHTTCHHHHHHHHHHSSCCSSCEECSSCCTT------------C
T ss_pred             -----------CCHHH-------------------HHHCCCHHHHHHHHHCCCCCCEEEECCCCCCC------------C
T ss_conf             -----------65445-------------------55255879999998648998427885668865------------5


Q ss_pred             CCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCEEC--CCCEEEEECCCCCEEEEEEEECCCCCC
Q ss_conf             553999997517955499998549478961663336100100157882000--231068536999423589983179999
Q 003699          342 AITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLY--GSRTLFFSYPSGTLRPLAIELTRPPMD  419 (802)
Q Consensus       342 ~vt~~~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~y--Ap~~Lffl~~~g~L~PiAIqL~~~~~~  419 (802)
                      +||++|++..|++++||++|+++|||||+||++  ++++ ++|.++++++|  ||+||||++++|+|+||||||+|+|++
T Consensus       281 ~vt~~~v~~~l~~g~tl~~al~~grLfi~Dy~~--l~~~-~~~~~~~~~~y~~Ap~~Lf~l~~~g~L~PiAIqL~~~p~~  357 (698)
T 3vf1_A          281 PVKNEMVEKLLDRGYTLEKAMKEGLIFITDYKI--LEGI-PTMDTPEDKRYITTPLGLFYLKNNDDIIPIAIQLYQQPGE  357 (698)
T ss_dssp             CCCHHHHGGGSCTTCCHHHHHHTTCEEEEECGG--GTTC-CCCEETTEECBCCCCEEEEEECTTSCEEEEEEESSSSCBT
T ss_pred             CCCHHHHHHHCCCCCCHHHHHHCCCEEEEECHH--HCCC-CCCCCCCCCCEECCCEEEEEECCCCCEEEEEEEEECCCCC
T ss_conf             676899986506898799998759989996345--3477-5654488732511645899987899740389997469988


Q ss_pred             CCCCCCEEEEC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH
Q ss_conf             99998603517-99999922789999998721001335666541002212479998603478668421204310132200
Q 003699          420 GKPQWKQVFTP-SWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTME  498 (802)
Q Consensus       420 ~~~~~~~VftP-~d~~~~~~~W~LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~iAt~R~Ls~~HPI~kLL~PHfr~tl~  498 (802)
                      .    ++|||| +|   ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+
T Consensus       358 ~----~~iftP~~d---~~~~W~lAK~~v~~~D~~~Hql~~Hll~TH~v~E~~~iAt~R~L~~~HPi~kLL~PH~r~tl~  430 (698)
T 3vf1_A          358 N----NSIWTPLKD---TEWDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWRNLPSVHPVWKLLYPHTKGIMA  430 (698)
T ss_dssp             T----BCEECTTTS---CHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHCCTTSHHHHHHHHHHTTHHH
T ss_pred             C----CCEECCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             8----973647989---856799999999756888888888874136778999999842499767456641156640320


Q ss_pred             CHHHHHHHCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             16999860336885112245784-46999999997116778877774578857998789999854333555784412128
Q 003699          499 INALAREALVNAGGIIESTFSPG-KYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGL  577 (802)
Q Consensus       499 IN~~AR~~Li~~gG~id~~~~~G-~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpYrdDgl  577 (802)
                      ||++||+.||++||++|+++++| .+++++++++|++ |+|++++||+||++|||+            .||+||||||||
T Consensus       431 IN~~ar~~Li~~~G~i~~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL~~RG~~------------~l~~YpY~~Dgl  497 (698)
T 3vf1_A          431 INTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRS-VTFDSYDLVKDLRQRGVD------------GLRKFYYKDDAL  497 (698)
T ss_dssp             HHHHHHHHTSSTTSHHHHHCTTTTTHHHHHHHHHHTT-CCGGGGCHHHHHHHTTCT------------TCTTCHHHHHHH
T ss_pred             CCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHC-CCCCCCCCHHHHHHCCCC------------CCCCCCCHHHHH
T ss_conf             1489896210888701454036720599999999843-542567786889876997------------678983077699


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC---CCCCCCCCCC-CCCCHHHHHHHHHHHEECCCCCCC
Q ss_conf             999999997986441026656676678789999999984057---8889999999-889956799987452001333211
Q 003699          578 DLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGH---ADKKDEPWWP-VLKTPEDLIDIITTIAWVASGHHA  653 (802)
Q Consensus       578 ~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~---~d~~~~~g~p-~l~t~~~Lv~~lT~iIf~aS~qHA  653 (802)
                      +||+||++||++||++||++|++|++|.|||+||+||+++||   ++.++. ||| +|+|+++||++||+|||+||+|||
T Consensus       498 ~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~~~~-g~P~~l~t~~~Lv~~lT~iIf~aS~qHA  576 (698)
T 3vf1_A          498 LLWNVIHQFVQDIIQIYYNDDDSVKKDNEIQDWIRDLHENGYPAGSDGTDK-KVPKSFENREELVHFLTVVVFTCSCQHA  576 (698)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSHHHHHTCHHHHHHHHHHHHTTSCCCTTCCCC-CCCSSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHEEHHHCCCHHH
T ss_conf             999999999999887538993010365999999999974467655677654-5765578899999887540301140233


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             11356631131259963213778999999964688641182778972199968999999999851389999742246577
Q 003699          654 AVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQME  733 (802)
Q Consensus       654 AVNfgQ~d~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~~LG~~~~  733 (802)
                      |||||||+|+||+||+|++||+|||++ ||..        +++++|++||++.+|+.+|+++|+||+|++||+|||+|++
T Consensus       577 AVNfgQ~~~~g~~PN~P~~~r~p~P~~-kg~~--------~~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~  647 (698)
T 3vf1_A          577 AVNFSQMATYGFHPNSPTLMRQPPPTE-KGKS--------NHKVIMASLANKHQAVTMVSVVNALTTIYPTEKFLGDYAD  647 (698)
T ss_dssp             HHHTTHHHHHSSGGGSCSCBSSCCCSS-TTCC--------CHHHHHHHSCCHHHHHHHHHHHHHHTCCCTTCCBTTCCTT
T ss_pred             HCCCCCCCCEEECCCCCHHHCCCCCCC-CCCC--------CHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             104575530203578845436899999-8988--------8778977687889999999999985478888743035784


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             788993789999999999999999999874056100025798667810003799999876887753349
Q 003699          734 QAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  802 (802)
Q Consensus       734 ~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~~~~~~PY~yL~P~~~~g~t~~~IpnSIsI  802 (802)
                      ++|+ |+++++|+++|+++|++||++|++||+++         ++||+||+|+        +|||||||
T Consensus       648 ~~~~-~~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~--------~IpnSIsI  698 (698)
T 3vf1_A          648 NLFG-DAAAHAAMAKFKSNLANITKQITERNQGM---------VSPYTWLIPG--------HVPNSIAI  698 (698)
T ss_dssp             CCCC-CHHHHHHHHHHHHHHHHHHHHHHHHTTTC---------SSCCCTTCGG--------GSBSSCCC
T ss_pred             CCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC--------CCCCEEEC
T ss_conf             0237-88999999999999999999999972899---------9884027988--------89773059


No 9  
>3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa}
Probab=1.00  E-value=1  Score=1236.62  Aligned_cols=553  Identities=29%  Similarity=0.451  Sum_probs=501.7

Q ss_pred             CEEEEECCCCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             259830651276899-9565898999999661899887555782762234577999987877664468998898887557
Q 003699           98 KRIFFTNKSYLPSQT-PNGLTRLRAEELLNLRGDGQGERKTHDRIYDYDVYNDLGVPDFCSELARPVLGGKEHPYPRRCR  176 (802)
Q Consensus        98 ~riff~~~~~LP~~t-p~~L~~~R~~EL~~~rg~g~g~r~~~driYdy~~yndlG~pd~~~~l~rpvlgg~~~pyprr~r  176 (802)
                      ..++..++|+||.+. .+.|+++|++||+++|.           .|+|+.|.+ |.|       +.+.+.          
T Consensus        16 ~~~l~~g~a~~~~~d~~~~~~~~R~~El~~r~~-----------~y~w~~~~~-G~p-------~~i~~~----------   66 (573)
T 3rde_A           16 PRGSHMGTARTVVDDPQGLFKKHREEELAERRK-----------LYRWGNWKD-GLI-------LNIAST----------   66 (573)
T ss_dssp             ------CCCCCSTTCTTCTTHHHHHHHHHHHHH-----------HSCEECSST-TSC-------CEECCS----------
T ss_pred             EEEECCCEEEEECCCCCHHHHHHHHHHHHHHHH-----------EECCCCCCC-CCC-------CCCCCC----------
T ss_conf             999668625740667778999999999998551-----------242899899-997-------400678----------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             89999999999777678885598887672222003454689998645444555311699999998888987307988999
Q 003699          177 TGRPPCETDPASESRTLINYVPRDEAFSEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPM  256 (802)
Q Consensus       177 tgr~~~~~~~~~e~~~~~~ylPrDe~Fs~~K~~~f~~~~~~~~~~~~~~~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~  256 (802)
                                 +     ..+||+||||++.|..+|..+.+++++++.+   +++++. ..+|+||+||+++|+.+ ..+ 
T Consensus        67 -----------~-----~~~LP~d~~f~~~K~~~f~~~~~~~~~~~~l---~~~~~~-~~~w~sl~D~~~lf~~~-~~~-  124 (573)
T 3rde_A           67 -----------G-----IHDLPVDERFLEDKRIDFEASLAKGLADLAV---KDSLNV-LMSWNSLDSFNRIFWSG-QSK-  124 (573)
T ss_dssp             -----------S-----GGGSCGGGSCCHHHHHHHHHHHHHHHHHHHH---HHHHHT-TSCCCSGGGGGGGCCSC-CCH-
T ss_pred             -----------C-----CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH---HHHHHH-CCCCCCHHHHHHHHCCC-CCC-
T ss_conf             -----------7-----0008831201542332177777888887423---456651-47989899999984579-988-


Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             51356788886454443301034575211235841332364575352899977740899511001357898899997767
Q 003699          257 PETFKEKALWRTILPRLVKGIEDTGKEVLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIY  336 (802)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~NP~~I~r~~~~P~~~~l~~~~~  336 (802)
                                      +++++                   .++|++|++||||+|||+||++||||+++|++        
T Consensus       125 ----------------~~e~v-------------------~~~W~~D~~Fg~Q~L~G~NP~~I~r~~~~P~~--------  161 (573)
T 3rde_A          125 ----------------LAERV-------------------RDSWKEDALFGYQFLNGTNPMLLRHSVELPAR--------  161 (573)
T ss_dssp             ----------------HHHHH-------------------HHHTTCHHHHHHHHHHSSCTTSCEECSSCCTT--------
T ss_pred             ----------------CCCCH-------------------HHHCCCHHHHHHHHHCCCCCHHEEECCCCCCC--------
T ss_conf             ----------------65012-------------------33232749999998648997223666768744--------


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCEEC--CCCEEEEECCCCCEEEEEEEEC
Q ss_conf             99998553999997517955499998549478961663336100100157882000--2310685369994235899831
Q 003699          337 GPPESAITKELIEKEIGGIMTVEEAIKQKKLFILDYHDLLLPYVEKVRELKGTTLY--GSRTLFFSYPSGTLRPLAIELT  414 (802)
Q Consensus       337 g~~~~~vt~~~i~~~l~g~~tl~~al~~grLFi~Dy~~~~lp~~~~~n~~~g~~~y--Ap~~Lffl~~~g~L~PiAIqL~  414 (802)
                          |+||++|++.   | +||++|+++|||||+||+  +++++ ++|.++++++|  ||+||||++++|+|+||||||+
T Consensus       162 ----~~vt~~~v~~---g-~tl~~al~~grLfi~Dy~--~l~~i-~~n~~~~~~~y~~Ap~~Lf~l~~~g~L~PlAIqL~  230 (573)
T 3rde_A          162 ----LKFPPGMEEL---Q-AQLEKELQGGTLFEADFS--LLDGI-KANVILSSQQYLAVPLVMLKLQPDGKLLPMVIQLQ  230 (573)
T ss_dssp             ----CCCCTTCHHH---H-HHHHHHHHHTCEEEEECG--GGTTC-CCCEETTEECCCCCCEEEEEECTTSCEEEEEEECS
T ss_pred             ----CCCCHHHHHC---C-CCHHHHHHCCCEEEEEHH--HHCCC-CCCCCCCCCCEEECCEEEEEECCCCCEEEEEEEEE
T ss_conf             ----5685999861---6-609999972998998425--53446-55656887315215568999878997625899974


Q ss_pred             CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCHH
Q ss_conf             79999999986035179999992278999999872100133566654100221247999860347866842120431013
Q 003699          415 RPPMDGKPQWKQVFTPSWHSTECWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFR  494 (802)
Q Consensus       415 ~~~~~~~~~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~iAt~R~Ls~~HPI~kLL~PHfr  494 (802)
                      .|..+  +..++||||+|   ++|+|+|||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||
T Consensus       231 ~p~~~--~~~~~iftP~d---~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~E~f~iAt~R~Ls~~HPI~kLL~PH~r  305 (573)
T 3rde_A          231 LPREG--SPLPPLFLPTD---PPMVWLLAKCWVRSSDFQLHELHSHLLRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFR  305 (573)
T ss_dssp             CCCTT--SCCCCEECTTS---CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCTTSHHHHHHGGGGT
T ss_pred             CCCCC--CCCCCEECCCC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHH
T ss_conf             58998--88898477899---95179999999861189999999987325788899999984239986752553205665


Q ss_pred             HHHHCHHHHHHHCCCCCCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             220016999860336885112245784-4699999999711677887777457885799878999985433355578441
Q 003699          495 YTMEINALAREALVNAGGIIESTFSPG-KYSMELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFA  573 (802)
Q Consensus       495 ~tl~IN~~AR~~Li~~gG~id~~~~~G-~~~~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpYr  573 (802)
                      +||+||++||+.||++||++|+++++| .++++|++++|++ |+|++++||+||++|||+            .||+||||
T Consensus       306 ~Tl~IN~~AR~~Li~~gGiid~~~~~g~~~~~~l~~~~~~~-~~f~~~~lP~dL~~RG~~------------~lp~YpY~  372 (573)
T 3rde_A          306 YTMEINVRARNGLVSDLGIFDQVVSTGGGGHVELLRRAAAL-LTYSSFCPPDDLADRGLL------------GVESSFYA  372 (573)
T ss_dssp             THHHHHHHCCCCCSSTTSHHHHHCTTTTTHHHHHHHHHHHH-CCSGGGSHHHHHHHTTCT------------TCTTCHHH
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHC-CCCCCCCCCHHHHHCCCC------------CCCCCCHH
T ss_conf             05442399997342898712455326702399999998702-511524670878866987------------68898257


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCHHHHHHHHHHHEECCCCCC
Q ss_conf             21289999999979864410266566766787899999999840578889999999-88995679998745200133321
Q 003699          574 KDGLDLWDALKQWVTDFVNHYYPNPSSVESDEELRSWWTEIRTVGHADKKDEPWWP-VLKTPEDLIDIITTIAWVASGHH  652 (802)
Q Consensus       574 dDgl~iW~AI~~~V~~yv~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p-~l~t~~~Lv~~lT~iIf~aS~qH  652 (802)
                      ||||+||+||++||++||++||++|++|++|.|||+||+||+++||++.++. ||| +|+|+++||++||+|||+||+||
T Consensus       373 dDgL~iW~aI~~~V~~~v~~yY~~D~~V~~D~ELQaW~~Ei~~~G~~~~~~~-g~P~~l~T~~~Li~~lT~iIf~aSaqH  451 (573)
T 3rde_A          373 QDALRLWEVISRYVEGIVSLHYKTDESVKEDFELQAWCREFTEIGLLGAQDR-GFPVSLQSKEQLCHFVTMCIFTCTGQH  451 (573)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCSHHHHHTCHHHHHHHHCCCCCCTTSCGGG-TCCSCCCSHHHHHHHHHHHHHCCCCCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCCHHH
T ss_conf             7699999999999999999857990341387889999999973446777555-677667889999988852152213034


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             11135663113125996321377899999996468864118277897219996899999999985138999974224657
Q 003699          653 AAVNFGQYTFGGYFPNRPTVARTKMPIEDPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQM  732 (802)
Q Consensus       653 AAVNfgQ~d~~gf~PN~P~~lr~p~P~~~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~~LG~~~  732 (802)
                      ||||||||+|+||+||+|++||+|||++ | .        .+++++|++||++.+|+.+|+++|+||+|++||+|||+|+
T Consensus       452 AAVNfgQ~~y~g~vPN~P~~~r~p~P~~-k-~--------~~~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~  521 (573)
T 3rde_A          452 SSNHLGQLDWYTWVPNAPCTMRLPPPTT-K-D--------ATLETVMATLPNFHQASLQMSITWQLGRCQPTMVALGQHE  521 (573)
T ss_dssp             HHHHTTHHHHSSSGGGSCSCCSSCCCSS-S-C--------CCHHHHHHHSCCHHHHHHHHHHHHHHHSCCTTCCBTTCCC
T ss_pred             HHHCCCCCCEEEECCCCHHHHCCCCCCC-C-C--------CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             4313475530405678727646999999-9-9--------8799999878886889999999999547888875203587


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             7788993789999999999999999999874056100025798667810003799999876887753349
Q 003699          733 EQAWGDDPVIKAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  802 (802)
Q Consensus       733 ~~~~~~d~~~~~a~~~F~~~L~~i~~~I~~RN~~~~~~~r~~~~~~PY~yL~P~~~~g~t~~~IpnSIsI  802 (802)
                      + .|+.|+++++|+++|+++|++||+.|++||+++         .+||+||+|+        +|||||||
T Consensus       522 ~-~~f~d~~~~~a~~~F~~~L~~ie~~I~~RN~~~---------~~PY~~L~P~--------~IpnSIsI  573 (573)
T 3rde_A          522 E-EYFSGPGPKAVLTKFREELAALDKDIEVRNAKL---------ALPYEYLRPS--------RVENSVAI  573 (573)
T ss_dssp             C-CCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSCCCTTCTT--------TSBSSCCC
T ss_pred             C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCCCCCC--------CCCCCCCC
T ss_conf             3-202788999999999999999999999981899---------9885007988--------98770249


No 10 
>3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens}
Probab=1.00  E-value=1  Score=1122.54  Aligned_cols=494  Identities=29%  Similarity=0.442  Sum_probs=449.4

Q ss_pred             CHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             72222003454689998645444555311699999998888987307988999513567888864544433010345752
Q 003699          204 SEIKQLQFSAKTLYSVLHGLVPSLETAIIDTDLGFPYFTTIDKLFNEGVNVPMPETFKEKALWRTILPRLVKGIEDTGKE  283 (802)
Q Consensus       204 s~~K~~~f~~~~~~~~~~~~~~~l~~~~~~~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (802)
                      +..|.++|..+..++++...+   +++++. .++|++|+||+++|..+ .++                 +++++      
T Consensus        13 ~~~k~~~~~~~~~~~~~~~~~---~~~~~~-~~~w~~l~D~~~~f~~~-~~~-----------------~~~~v------   64 (541)
T 3d3l_A           13 LGTENLDFEWTLKAGALEMAL---KRVYTL-LSSWNCLEDFDQIFWGQ-KSA-----------------LAEKV------   64 (541)
T ss_dssp             ---------CCSSTTHHHHHH---HHHHHH-HHTTSSSTTHHHHHTSC-CCH-----------------HHHHH------
T ss_pred             CCCCCCEEEECHHHHHHHHHH---HHHHHC-CCCCCCHHHHHHHHCCC-CCC-----------------CCHHH------
T ss_conf             555640234004677788789---988641-58866699999984367-777-----------------74345------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHH
Q ss_conf             11235841332364575352899977740899511001357898899997767999985539999975179554999985
Q 003699          284 VLRFETPETMDRDKFFWFRDEEFGRQTLAGLNPYSIRLVTEWPLRSTLDPEIYGPPESAITKELIEKEIGGIMTVEEAIK  363 (802)
Q Consensus       284 ~~~~~~P~~~~~~~~~W~~D~~FgrQ~L~G~NP~~I~r~~~~P~~~~l~~~~~g~~~~~vt~~~i~~~l~g~~tl~~al~  363 (802)
                                   .++|++|++||||+|||+||++|+||+++|++            |+||++|++   ++ +||++|++
T Consensus        65 -------------~~~W~~De~Fa~Q~L~G~NP~~I~r~~~~P~~------------~~vt~~~v~---~~-~tl~~al~  115 (541)
T 3d3l_A           65 -------------RQCWQDDELFSYQFLNGANPMLLRRSTSLPSR------------LVLPSGMEE---LR-AQLEKELQ  115 (541)
T ss_dssp             -------------HHHTTSHHHHHHHHHHSSCCSSCEECSSCCTT------------CCCCSSCHH---HH-HHHHHHHH
T ss_pred             -------------HHHHCCCHHHHHHHHCCCCCCCCEECCCCCCC------------CCCCHHHHC---CC-CCHHHHHH
T ss_conf             -------------54311719999998648997412346778622------------579988966---86-66999976


Q ss_pred             CCCEEEECCCCCCCCHHHHCCCCCCCEEC--CCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCHHHH
Q ss_conf             49478961663336100100157882000--2310685369994235899831799999999860351799999922789
Q 003699          364 QKKLFILDYHDLLLPYVEKVRELKGTTLY--GSRTLFFSYPSGTLRPLAIELTRPPMDGKPQWKQVFTPSWHSTECWLWR  441 (802)
Q Consensus       364 ~grLFi~Dy~~~~lp~~~~~n~~~g~~~y--Ap~~Lffl~~~g~L~PiAIqL~~~~~~~~~~~~~VftP~d~~~~~~~W~  441 (802)
                      +||||++||++  ++++ ++|.++++++|  ||+||||++++|+|+||||||+.| +++++ .++||||+|   ++|.|+
T Consensus       116 ~grLfi~Dy~~--l~~~-~~n~~~~~~~Y~~Ap~~lf~l~~~g~L~PlAIqL~~p-~~~~p-~~~VftP~D---~~~~W~  187 (541)
T 3d3l_A          116 NGSLFEADFIL--LDGI-PANVIRGEKQYLAAPLVMLKMEPNGKLQPMVIQIQPP-NPSSP-TPTLFLPSD---PPLAWL  187 (541)
T ss_dssp             TTCEEEEECGG--GTTC-CC-----CCCCCCCCEEEEEECTTSCEEEEEEESSCC-BTTBS-SCCCBCTTS---CHHHHH
T ss_pred             CCCEEEECCHH--HCCC-CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECC-CCCCC-CCEEECCCC---CCHHHH
T ss_conf             49978835255--4668-6665587754122556999998999886799996079-99898-750784899---940899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHCHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             99999872100133566654100221247999860347866842120431013220016999860336885112245784
Q 003699          442 LAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPINRLLQPHFRYTMEINALAREALVNAGGIIESTFSPG  521 (802)
Q Consensus       442 LAK~~v~~aD~~~Hq~vsHll~THlv~Epf~iAt~R~Ls~~HPI~kLL~PHfr~tl~IN~~AR~~Li~~gG~id~~~~~G  521 (802)
                      |||+||++||+++||+++||++||+++|||+|||+||||.+|||||||.||||+||+||++||+.||++||++|++|++|
T Consensus       188 lAK~~v~~aD~~~HqlisHll~THlv~Epf~iAt~RqLs~~HPI~kLL~PH~r~Tl~IN~~AR~~LI~~~Giid~~~~~g  267 (541)
T 3d3l_A          188 LAKSWVRNSDFQLHEIQYHLLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVSTG  267 (541)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTSHHHHHHGGGCCC--------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCC
T ss_conf             99999998888999999877566788889999864248865840455478998799888999975218887122320588


Q ss_pred             HHH-HHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             469-9999999711677887777457885799878999985433355578441212899999999798644102665667
Q 003699          522 KYS-MELSSVAYDKHWRFDHEALPKDLISRGMAVEDPSAPRGIKLTIEDYPFAKDGLDLWDALKQWVTDFVNHYYPNPSS  600 (802)
Q Consensus       522 ~~~-~el~~~~y~~~w~f~~~~lP~dL~~RG~~~~D~~~~~g~~~~l~~YpYrdDgl~iW~AI~~~V~~yv~~yY~~D~~  600 (802)
                      .++ ++|++++|++ |+|++++||+||++|||.            .||+||||+|||+||+||++||++||++||++|++
T Consensus       268 ~~~~~el~~~~y~~-~~f~~~~lP~dL~~RG~e------------~ip~YpY~dDgL~iW~aI~~~V~~yv~~yY~~D~~  334 (541)
T 3d3l_A          268 GGGHVQLLRRAAAQ-LTYCSLCPPDDLADRGLL------------GLPGALYAHDALRLWEIIARYVEGIVHLFYQRDDI  334 (541)
T ss_dssp             -CCSHHHHHHHHHT-CCTTTTCHHHHHHHTTCS------------SCTTCHHHHHHHHHHHHHHHHHHHHHHHHSCSHHH
T ss_pred             CCCHHHHHHHHHCC-CCCCCCCCCHHHHHCCCC------------CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             42289999999727-621424575666645755------------46688520008999999999999999873688432


Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             66787899999999840578889999999889956799987452001333211113566311312599632137789999
Q 003699          601 VESDEELRSWWTEIRTVGHADKKDEPWWPVLKTPEDLIDIITTIAWVASGHHAAVNFGQYTFGGYFPNRPTVARTKMPIE  680 (802)
Q Consensus       601 V~~D~ELQaW~~Ei~~~G~~d~~~~~g~p~l~t~~~Lv~~lT~iIf~aS~qHAAVNfgQ~d~~gf~PN~P~~lr~p~P~~  680 (802)
                      |++|.|||+||+||+++||+++++.+||++|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++
T Consensus       335 V~~D~ELQaW~~Ei~~~G~~~~~~~g~p~~l~T~~~Li~~lT~iIf~aSaqHAAVNfgQy~y~g~vPN~P~~~r~p~P~~  414 (541)
T 3d3l_A          335 VKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTT  414 (541)
T ss_dssp             HHHCHHHHHHHHHHHTTTTTSGGGTTCCSSCCSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHSSGGGSCSCCSSCCCSS
T ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf             23678999999999845677875679997667599999997756764002445332586631022667756656999977


Q ss_pred             CCCCHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99964688641182778972199968999999999851389999742246577788993789999999999999999999
Q 003699          681 DPSDEDWKLFLEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAAFERFSGRLKELEGII  760 (802)
Q Consensus       681 ~kg~~~~~~~~~~~e~~~l~~LP~~~~a~~~m~~~~~LS~~~~de~~LG~~~~~~~~~d~~~~~a~~~F~~~L~~i~~~I  760 (802)
                       ||..+        ++++|++||++.||+.+|+++++||+|++||+|||+|++ .|+.|+++++|+++|+++|++||++|
T Consensus       415 -kg~~~--------~~~~l~~LP~~~~a~~~~~~~~~LS~~~~de~~LG~y~~-~~f~d~~~~~a~~~F~~~L~~ie~~I  484 (541)
T 3d3l_A          415 -KEDVT--------MATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEI  484 (541)
T ss_dssp             -SSSCC--------HHHHHHHSCCHHHHHHHHHHHHHHC----CCCBTTCCCC-CSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCC--------HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -78837--------999998787889999999999996368888761256774-11268489999999999999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             874056100025798667810003799999876887753349
Q 003699          761 DERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI  802 (802)
Q Consensus       761 ~~RN~~~~~~~r~~~~~~PY~yL~P~~~~g~t~~~IpnSIsI  802 (802)
                      ++||+++         .+||+||+|+        +|||||||
T Consensus       485 ~~RN~~~---------~~PY~~L~P~--------~IpnSIsI  509 (541)
T 3d3l_A          485 TARNEQL---------DWPYEYLKPS--------CIENSVTS  509 (541)
T ss_dssp             HHHHHTC---------SSCCCSCCGG--------GSBSSCC-
T ss_pred             HHHCCCC---------CCCCCEECCC--------CCCCEEEE
T ss_conf             9970899---------9997117988--------97757878


Done!