Query 003700
Match_columns 802
No_of_seqs 324 out of 3013
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 04:22:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003700.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003700hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2019 Metalloendoprotease HM 100.0 1E-111 3E-116 876.0 64.0 780 1-792 66-994 (998)
2 COG1026 Predicted Zn-dependent 100.0 8E-110 2E-114 916.1 66.6 791 1-801 34-977 (978)
3 PTZ00432 falcilysin; Provision 100.0 1E-100 2E-105 913.1 79.9 788 1-793 104-1114(1119)
4 KOG0961 Predicted Zn2+-depende 100.0 3E-59 6.5E-64 485.0 45.7 769 14-799 46-1004(1022)
5 PRK15101 protease3; Provisiona 100.0 3.7E-58 8.1E-63 558.5 59.1 705 9-772 69-918 (961)
6 COG1025 Ptr Secreted/periplasm 100.0 4.3E-42 9.2E-47 378.9 54.8 705 8-771 48-896 (937)
7 KOG0959 N-arginine dibasic con 100.0 4.8E-39 1E-43 362.0 56.7 706 8-770 52-910 (974)
8 COG0612 PqqL Predicted Zn-depe 100.0 3.2E-37 6.9E-42 341.8 33.1 396 363-786 20-435 (438)
9 KOG0960 Mitochondrial processi 100.0 1.4E-35 3E-40 292.4 31.7 397 364-795 38-462 (467)
10 COG0612 PqqL Predicted Zn-depe 100.0 7.9E-34 1.7E-38 314.7 21.9 183 9-212 42-224 (438)
11 TIGR02110 PQQ_syn_pqqF coenzym 100.0 4.1E-33 8.9E-38 312.8 22.8 292 10-324 26-345 (696)
12 KOG0960 Mitochondrial processi 100.0 8.1E-32 1.8E-36 265.8 23.0 183 9-212 58-240 (467)
13 TIGR02110 PQQ_syn_pqqF coenzym 100.0 2.2E-30 4.8E-35 290.9 32.2 329 364-717 4-348 (696)
14 PF08367 M16C_assoc: Peptidase 100.0 2.2E-30 4.7E-35 261.1 23.7 247 288-537 1-248 (248)
15 PRK15101 protease3; Provisiona 100.0 2.1E-29 4.5E-34 306.9 34.1 395 363-782 47-462 (961)
16 KOG2067 Mitochondrial processi 100.0 3.6E-28 7.8E-33 240.5 25.9 398 364-794 29-456 (472)
17 PTZ00432 falcilysin; Provision 99.9 8.6E-24 1.9E-28 253.8 33.9 373 365-770 97-562 (1119)
18 KOG2067 Mitochondrial processi 99.9 4.4E-24 9.5E-29 211.7 13.5 181 10-212 50-230 (472)
19 PF00675 Peptidase_M16: Insuli 99.8 9.9E-20 2.1E-24 170.1 5.4 133 9-161 16-148 (149)
20 COG1025 Ptr Secreted/periplasm 99.8 2.1E-16 4.5E-21 176.4 30.4 395 364-782 28-441 (937)
21 KOG0959 N-arginine dibasic con 99.7 6.7E-15 1.5E-19 167.7 34.3 393 364-780 32-444 (974)
22 KOG2583 Ubiquinol cytochrome c 99.7 6.1E-14 1.3E-18 140.6 31.8 380 363-786 26-424 (429)
23 PF05193 Peptidase_M16_C: Pept 99.7 2.8E-16 6.1E-21 152.8 14.3 166 549-715 4-184 (184)
24 COG1026 Predicted Zn-dependent 99.6 1.2E-12 2.5E-17 147.4 28.1 389 366-783 28-459 (978)
25 KOG2583 Ubiquinol cytochrome c 99.6 3.9E-14 8.4E-19 142.0 13.5 172 9-204 47-219 (429)
26 PF00675 Peptidase_M16: Insuli 99.4 6.4E-12 1.4E-16 117.2 13.8 143 370-525 1-145 (149)
27 KOG0961 Predicted Zn2+-depende 99.2 1.1E-08 2.4E-13 109.3 28.4 390 367-791 28-466 (1022)
28 KOG2019 Metalloendoprotease HM 99.1 3.7E-08 8E-13 105.6 24.4 385 366-783 60-497 (998)
29 PF05193 Peptidase_M16_C: Pept 98.9 4.1E-09 8.8E-14 102.2 8.7 154 167-325 1-184 (184)
30 PF03410 Peptidase_M44: Protei 93.0 0.19 4.1E-06 53.2 6.0 161 13-212 26-190 (590)
31 PF03410 Peptidase_M44: Protei 92.6 1.6 3.5E-05 46.5 12.0 188 364-595 3-194 (590)
32 PHA03081 putative metalloprote 90.6 0.43 9.4E-06 50.7 5.5 161 13-212 26-190 (595)
33 PHA03081 putative metalloprote 89.1 4.9 0.00011 43.1 11.6 188 364-595 3-194 (595)
34 PF09851 SHOCT: Short C-termin 55.1 32 0.0007 21.9 4.1 20 698-717 12-31 (31)
35 PF08367 M16C_assoc: Peptidase 28.4 39 0.00084 34.2 2.2 71 28-100 112-193 (248)
36 PF11180 DUF2968: Protein of u 23.0 56 0.0012 30.9 2.0 74 637-713 27-110 (192)
37 COG1725 Predicted transcriptio 22.5 3E+02 0.0065 24.4 6.2 75 635-716 35-120 (125)
38 PF06296 DUF1044: Protein of u 21.0 2.7E+02 0.0058 24.5 5.6 59 364-427 54-114 (120)
39 PF05838 Glyco_hydro_108: Glyc 20.1 79 0.0017 25.7 2.0 25 162-186 39-64 (83)
No 1
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-111 Score=876.05 Aligned_cols=780 Identities=59% Similarity=0.946 Sum_probs=712.8
Q ss_pred CcccccCCCcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhH
Q 003700 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDF 80 (802)
Q Consensus 1 ~~~~~~~~~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~ 80 (802)
+|++++|+|++|+++++++|++.+|++|+|||.++|||.+||..++|++||++++.+++||+|.+|+|.|+|++.+++++
T Consensus 66 lhl~reD~N~vFsI~FrTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~T~yPfattN~kDf 145 (998)
T KOG2019|consen 66 LHLDREDENNVFSIVFRTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTAPDYTFYPFATTNTKDF 145 (998)
T ss_pred EeeccCCCCceeEEEeecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccCCCcceeecccCChHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccchhhhhhccccccCCCCCCCc---chhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCC
Q 003700 81 YNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDIT---YKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVD 157 (802)
Q Consensus 81 ~~~l~~~~d~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~---e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 157 (802)
.++.++|+|+.+.|.+...+ |.|||||+|.+++..+.. .||||++||++..++|.++.+..++++|||++.|+..
T Consensus 146 ~NL~dVYLDAtffPklr~~d--F~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq~L~p~~tYgv~ 223 (998)
T KOG2019|consen 146 YNLRDVYLDATFFPKLRKLD--FQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQALFPENTYGVN 223 (998)
T ss_pred HHHHHHhhhcccchHHHhhh--hhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHHHHhhCcccccccc
Confidence 99999999999999999999 999999999887665555 9999999999999999999999999999999999999
Q ss_pred CCCCcCccCCCCHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhh---------------------------------
Q 003700 158 SGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILS--------------------------------- 204 (802)
Q Consensus 158 ~~G~~~~i~~~t~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~--------------------------------- 204 (802)
++|+|-.|.++|+|+|++||++||||+|+.|+.|||++.++.+++++
T Consensus 224 SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv~~qk~f~kp~rvve~~p~ 303 (998)
T KOG2019|consen 224 SGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKVTFQKLFDKPRRVVEKGPA 303 (998)
T ss_pred CCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCccccccccccCceeeeecCC
Confidence 99999999999999999999999999999999999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q 003700 205 -------------------------------------------------------------------------------- 204 (802)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (802)
T Consensus 304 d~~~~p~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gpsSp~yk~LiESGLGtEfsvnsG~~~~t~~~~fsVGLqGv 383 (998)
T KOG2019|consen 304 DPGDLPKKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPSSPFYKALIESGLGTEFSVNSGYEDTTLQPQFSVGLQGV 383 (998)
T ss_pred CCCCCccceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCccHHHHHHHHcCCCcccccCCCCCcccccceeeeeeccc
Confidence
Q ss_pred -----------------------------hcccccccccccccCCCCcchhHHHHHhhhcccccCCCCccCcccchHHHH
Q 003700 205 -----------------------------EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMA 255 (802)
Q Consensus 205 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 255 (802)
++.++++|+..++..+. .|+.++......|.++.||++.|+++..+..
T Consensus 384 seediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~qst~---fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~ 460 (998)
T KOG2019|consen 384 SEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQSTG---FGLSLMQSIISKWINDMDPFEPLKFEEQLKK 460 (998)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhccccc---hhHHHHHHHhhhhccCCCccchhhhhhHHHH
Confidence 11233333333321111 3667777778899999999999999999999
Q ss_pred HHHHHhccCCcchHHHHHHHhhccCCCeeEEEEecCcchhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCC
Q 003700 256 LKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETP 335 (802)
Q Consensus 256 l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~t~~el~~~~~~~~~~~~~~~~~ 335 (802)
++.+++.. ++.+|+.++++|++++.+.+++++.|++...+...++++.+++++...+|++++.++-+.-..+...|+
T Consensus 461 lk~~l~ek-~~~lfq~lIkkYilnn~h~~t~smqpd~e~~~~~~~eE~tkL~ek~~alteeD~~ei~k~~~eL~~kQ~-- 537 (998)
T KOG2019|consen 461 LKQRLAEK-SKKLFQPLIKKYILNNPHCFTFSMQPDPEFAEKLEQEEATKLEEKKAALTEEDLAEIAKAGEELREKQS-- 537 (998)
T ss_pred HHHHHhhh-chhHHHHHHHHHHhcCCceEEEEecCCchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhC--
Confidence 99999865 567999999999999999999999999999999999999999999999999999999887777777776
Q ss_pred CCccccccCCCCCCCCCCCCCCCCCCcccccCCceEEEeecCCCceEEEEEEeeCCCCCcccccChHHHHHhhhhcCCCC
Q 003700 336 DPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKD 415 (802)
Q Consensus 336 ~~~~~l~~lp~~t~~dl~~~~~~~p~~~~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Gt~~ 415 (802)
+|+.+.++|.+.++|||+.....+.++...||++|.+...+++|++|+++.++.++++.+..||+.+|+..|.+.||+.
T Consensus 538 -tp~dlsClPtL~vsDIp~~~~~~~~~v~dingvkv~~~dl~tngi~Y~r~~~~l~~~p~eL~PylPlfc~sll~lGt~~ 616 (998)
T KOG2019|consen 538 -TPEDLSCLPTLNVSDIPKTIPYTKLEVGDINGVKVQRCDLFTNGITYTRVVFDLNSLPEELLPYLPLFCQSLLNLGTGD 616 (998)
T ss_pred -CccccccccccccccCCCCCCccceeeeeccCceeEEeeccCCceEEEEEeeccccCcHHhhcchHHHHHHHHhcCCCc
Confidence 4589999999999999999887788888999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcccceEEeeeeccCCCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHh
Q 003700 416 LSFVQLDQLIGRKTGGISVYPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARM 495 (802)
Q Consensus 416 ~s~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~ 495 (802)
.+..|++.+|...+||++++....+..+.+.++..+.++..++..+.+.+++|+..++.++.|.+.++++..+.+..+++
T Consensus 617 lsf~el~qqI~rkTGGiS~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s~~ 696 (998)
T KOG2019|consen 617 LSFVELEQQIGRKTGGISVSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSASRM 696 (998)
T ss_pred ccHHHHHHHhhhhcCceeecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHHHh
Confidence 99999999999999999999998887788888888999999999999999999999999999998899999999999999
Q ss_pred hhhhccCcHHHHHHHHHhccChhhHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccc
Q 003700 496 ENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKN 575 (802)
Q Consensus 496 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~ 575 (802)
.+.+.+.||.+|..++.+.+.+.++..+.++|+.+.+++.++.+..+.+++.+.+.|.++.+.+.+.++|.+.|+.|..+
T Consensus 697 ~n~i~dsGH~~A~~rs~a~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itAd~~q 776 (998)
T KOG2019|consen 697 TNGIADSGHGFAAARSAAMLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITADPKQ 776 (998)
T ss_pred hccCCcccchhHhhhhhcccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEecCccc
Confidence 99999999999999999999999999999999999999999999888889999999999999999999999999999887
Q ss_pred hhhHHHHHHHHHhcCCCCC-CcccccccccCCCCcEEE--EcC-CCceEEEeecccCCCCCCcchHHHHHHHHhcCccch
Q 003700 576 LKNSERFVGKFLDMLPTNS-PVERVKWKAHLPSANEAI--VIP-TQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLW 651 (802)
Q Consensus 576 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~d~~al~ll~~iLg~s~L~ 651 (802)
...+.+.+++|+..+|... ......|....+-+...+ .+| .+|+|++.+..+.+++|+|.++++|++.+|+...||
T Consensus 777 ~~~vEkav~kFl~~lp~e~p~g~~st~d~r~p~~~~~i~~~~P~fqvnyvgka~~~vpyt~~d~asl~vlS~~lt~k~Lh 856 (998)
T KOG2019|consen 777 LTNVEKAVEKFLDSLPRENPSGSKSTWDARLPLRSEAIRVVIPTFQVNYVGKAGLGVPYTHPDGASLQVLSKLLTNKWLH 856 (998)
T ss_pred chhHHHHHHHHHHhccccCCCCCccCccccCCCCceeEEEeccccchhhhhhhcccccCCCCCCcHHHHHHHHHHHHHHH
Confidence 7789999999999998433 222333433333333433 557 568999999999999999999999999999999999
Q ss_pred HhhhhcCCCCCccccccCCCceEEEEEEeCCChHHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhcccCCChHHHHHH
Q 003700 652 DRVRVSGGAYGGFCDFDSHSGVFSFLSYRDPNLLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPDAKGYS 731 (802)
Q Consensus 652 ~~iRekg~aY~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~~~~~~~~~~~ 731 (802)
.+|||||||||.+++++...|.|+|++|||||+.++++.+....++++...+++++|..||.+++++.+.++.|.+.+
T Consensus 857 ~evRekGGAYGgg~s~~sh~GvfSf~SYRDpn~lktL~~f~~tgd~~~~~~~~~~dldeAkl~~f~~VDap~~P~~kG-- 934 (998)
T KOG2019|consen 857 DEVREKGGAYGGGCSYSSHSGVFSFYSYRDPNPLKTLDIFDGTGDFLRGLDVDQQDLDEAKLGTFGDVDAPQLPDAKG-- 934 (998)
T ss_pred HHHHHhcCccCCccccccccceEEEEeccCCchhhHHHhhcchhhhhhcCCccccchhhhhhhhcccccCCcCCcccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998888776
Q ss_pred HHHHHHhCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEcChhhHHHhhhhh
Q 003700 732 SLLRHLLGITEEERQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVASPDDVDAANKER 792 (802)
Q Consensus 732 ~~~~~~~g~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg~~~~i~~~~~~~ 792 (802)
+.+.++|.+.+..+..+++|.+|+..|++++|.+|+...+..+.++|..++.++...+++
T Consensus 935 -~~~fl~gvtDemkQarREqll~vSl~d~~~vae~yl~~~~~~~~vav~g~E~~~~a~~e~ 994 (998)
T KOG2019|consen 935 -LLRFLLGVTDEMKQARREQLLAVSLKDFKAVAEAYLGVGDKGVAVAVAGPEDIDAANDER 994 (998)
T ss_pred -hHHHHhcCCHHHHHHHHHHHHhhhHHHHHHHHHHHhccCCcceEEEeeCccCcchhcCcc
Confidence 445679999999999999999999999999999999987877888787888886666554
No 2
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=100.00 E-value=8.4e-110 Score=916.10 Aligned_cols=791 Identities=38% Similarity=0.663 Sum_probs=710.2
Q ss_pred CcccccCCCcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhH
Q 003700 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDF 80 (802)
Q Consensus 1 ~~~~~~~~~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~ 80 (802)
+|++|+|+|++|.++++|+|.+.+|+||+|||++||||++||.+++|..++++++++++||+|+.|+|+|++++.+++++
T Consensus 34 ~hi~~~d~~~vFsi~F~T~p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T~~D~T~YP~sS~~~~Df 113 (978)
T COG1026 34 AHIKNEDPNNVFSIAFKTEPHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFTFPDKTVYPASSANEKDF 113 (978)
T ss_pred EEecCCCcCceEEEEeecCCCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhccCCCcceeeccccCcchH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCC
Q 003700 81 YNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGG 160 (802)
Q Consensus 81 ~~~l~~~~d~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G 160 (802)
.++|++|+|++++|.++++. |.|||||+|.+++ ++++.+|||++||++..+++.+++++.+++++||+..|+++++|
T Consensus 114 ~NLl~VYlDavf~PlL~~e~--F~QEgwr~e~~~~-~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~slfp~~ty~~~SGG 190 (978)
T COG1026 114 YNLLSVYLDAVFHPLLTKES--FLQEGWRIEFKDE-SNLKYKGVVYNEMKGAYSSGESVLSRAMQQSLFPGTTYGVNSGG 190 (978)
T ss_pred HHHHHHHHHhhhCcccchHH--HhhhhhccccCCC-ccceeeeEEeehhcccccCchhHHHHHHHHhhCCCccccccCCC
Confidence 99999999999999999999 9999999999876 67899999999999999999999999999999999999999999
Q ss_pred CcCccCCCCHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhc----------------------------------
Q 003700 161 DPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEA---------------------------------- 206 (802)
Q Consensus 161 ~~~~i~~~t~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~---------------------------------- 206 (802)
.|..|.+||+|++++||+++|+|+||.|+++||+++++.++.|++.
T Consensus 191 ~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~~~~i~~~~~~~~~~~~~~~ypi~~ 270 (978)
T COG1026 191 DPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRELDVPIPDQKAFKKPRRKVLEYPISF 270 (978)
T ss_pred CcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhccccccccCCCCCcccccCcccccceeeccCC
Confidence 9999999999999999999999999999999999999999999811
Q ss_pred --------------------------------------------------------------------------------
Q 003700 207 -------------------------------------------------------------------------------- 206 (802)
Q Consensus 207 -------------------------------------------------------------------------------- 206 (802)
T Consensus 271 ~~~de~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~~~asPl~~~liesglg~~~~~g~~~~~~~~~~f~v~~~gv~~e 350 (978)
T COG1026 271 DEEDEDQGLLSLSWLGGSASDAEDSLALEVLEEILLDSAASPLTQALIESGLGFADVSGSYDSDLKETIFSVGLKGVSEE 350 (978)
T ss_pred CCCCCceeEEEEEEecCCcccHHHHHHHHHHHHHHccCcccHHHHHHHHcCCCcccccceeccccceeEEEEEecCCCHH
Confidence
Q ss_pred ----------------------------ccccccccccccCCCCcchhHHHHHhhhcccccCCCCccCcccchHHHHHHH
Q 003700 207 ----------------------------SMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKA 258 (802)
Q Consensus 207 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~l~~ 258 (802)
.+++.|+..++. ...|.|+.++...+..|.++++|...|++...++.|++
T Consensus 351 k~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~--~s~pfgl~l~~~~~~gw~~G~dp~~~Lr~~~~~~~Lr~ 428 (978)
T COG1026 351 KIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEV--KSYPFGLGLMFRSLYGWLNGGDPEDSLRFLDYLQNLRE 428 (978)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhh--cCCCccHHHHHHhccccccCCChhhhhhhHHHHHHHHH
Confidence 111112222221 23455677777778899999999999999999999988
Q ss_pred HHhccCCcchHHHHHHHhhccCCCeeEEEEecCcchhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCCCCc
Q 003700 259 RLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPP 338 (802)
Q Consensus 259 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~t~~el~~~~~~~~~~~~~~~~~~~~ 338 (802)
.+.. + .||++|+++||++|+|.+++++.|+....+..++++++.++.+...+|+++++++++..+.++..|.++++.
T Consensus 429 ~le~--~-~~fe~LI~ky~l~N~h~~~v~~~Ps~~~~~~~ekee~e~L~~~~~~l~de~~~ki~~~~~~lke~Q~~~dse 505 (978)
T COG1026 429 KLEK--G-PYFEKLIRKYFLDNPHYVTVIVLPSPELEEKLEKEERELLQKRSSELTDEDLEKIIKDSKKLKERQDQPDSE 505 (978)
T ss_pred hhhc--C-hHHHHHHHHHhhcCCccEEEEEecChHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCCch
Confidence 8863 3 389999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCCCcccccCCceEEEeecCCCceEEEEEEeeCCCCCcccccChHHHHHhhhhcCCCCCCH
Q 003700 339 EALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSF 418 (802)
Q Consensus 339 ~~l~~lp~~t~~dl~~~~~~~p~~~~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~ 418 (802)
+.++.+|.++++|||+...+.+.+....+..+|++++.+++++++++++|+.+.++.+..|++++|+.+|...||+++++
T Consensus 506 ~~~~~lP~l~~~dvp~~~~k~~l~~~~~~~~~v~~~~~~tn~i~yl~~~~~~~~l~~~llpyL~L~~~~l~~lgt~~~~y 585 (978)
T COG1026 506 EDLATLPTLKLGDVPDPIEKTSLETEVSNEAKVLHHDLFTNGITYLRLYFDLDMLPSELLPYLPLFAFALTNLGTETYSY 585 (978)
T ss_pred hhhhhccccchhcCCCcccccceeeeccCCcceEEeecCCCCeEEEEEEeecCCCChhhhhhHHHHHHHHHhcCCCCcCH
Confidence 99999999999999999999888888899999999999999999999999999899999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEeeeeccC-CCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhh
Q 003700 419 VQLDQLIGRKTGGISVYPFTSSI-HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMEN 497 (802)
Q Consensus 419 ~el~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~ 497 (802)
.++.+.|+..+||++++.++.+. .+.+.++..+.++++++.++.+++++|+.+++.++.|+|.+|++.++.++++++..
T Consensus 586 ~e~~~~i~~~TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~Rlkell~q~~~~l~~ 665 (978)
T COG1026 586 KELLNQIERHTGGISVSLSVDTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRERLKELLEQYLSDLTS 665 (978)
T ss_pred HHHHHHHHHHhCCceeeEeeccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHHHHHHHHHHHHhhhHH
Confidence 99999999999999999988553 35566789999999999999999999999999999998789999999999999999
Q ss_pred hhccCcHHHHHHHHHhccChhhHHHHHhccchHHHHHHHHHHHhhcCHH-HHHHHHHHHHHHhcCCCCcEEEEEeCccch
Q 003700 498 RLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWA-GISSSLEEIRRSFLSREGCLINMTADGKNL 576 (802)
Q Consensus 498 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~-~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~ 576 (802)
...+.|+.+|..++.+.++.++.+.+.++|+.++++++++.+.+++..+ .+.+.|++++++++..+|+.+++.||.+..
T Consensus 666 ~vr~sG~~~A~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~~~n~~i~i~~~~~~~ 745 (978)
T COG1026 666 SVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQTNNLRIAIIGDIDKI 745 (978)
T ss_pred hhhccchHHHHHHhhcccccchhHHHHhcChhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhcCceEEEEecChhhh
Confidence 9999999999999999999999999999999999999999998877776 789999999999999999989999998743
Q ss_pred hhHHHHHHHHHhcCC---CCCC-cc-cccccccCCC-CcEEEEcCCCceEEEeec--ccCCCCCCcchHHHHHHHHhcCc
Q 003700 577 KNSERFVGKFLDMLP---TNSP-VE-RVKWKAHLPS-ANEAIVIPTQVNYVGKAA--NIFETGYKLNGSAYVISKHISNV 648 (802)
Q Consensus 577 ~~~~~~~~~~~~~l~---~~~~-~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~al~ll~~iLg~s 648 (802)
.++.+ +++++-++ .... +. .......... ..+.+.++++++|.+.++ ..+++.|||++++.|++.+|+++
T Consensus 746 ~~~~e--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~p~a~~~l~fs~~~~~y~hpd~~~l~vls~~L~~~ 823 (978)
T COG1026 746 LDLLE--NPLLKFLEHLLPGFELPTPPKNPHLDLISSLSEATIIPSPVAYNALAFSIGGLPYTHPDYAALQVLSEYLGSG 823 (978)
T ss_pred HHHHH--HHhhhhhcccCcccccCCCCCCcchhhhccccceEEeccHHHHHHHhhhccCCCCCCccchHHHHHHHHhccc
Confidence 33322 33333322 1111 10 0111111112 456677788888766665 45789999999999999999999
Q ss_pred cchHhhhhcCCCCCccccccCCCceEEEEEEeCCChHHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhcccCCChHHH
Q 003700 649 WLWDRVRVSGGAYGGFCDFDSHSGVFSFLSYRDPNLLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPDAK 728 (802)
Q Consensus 649 ~L~~~iRekg~aY~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~~~~~~~~ 728 (802)
+||.+||++|||||++++++...|.|+|.+||||++.++++++++.++.+..+.++++|+++|+.++++.++.+.+|...
T Consensus 824 ~lw~~IR~~GGAYGa~as~~~~~G~f~f~sYRDPn~~kt~~v~~~~v~~l~s~~~~~~d~~~~ilg~i~~~d~p~sp~~~ 903 (978)
T COG1026 824 YLWNKIREKGGAYGASASIDANRGVFSFASYRDPNILKTYKVFRKSVKDLASGNFDERDLEEAILGIISTLDTPESPASE 903 (978)
T ss_pred hhHHHHHhhccccccccccccCCCeEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcccccccCCcce
Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHh-hCCCeEEEEcChhhHHHhhhhhccccchhhc
Q 003700 729 GYSSLLRHLLGITEEERQRRREEILSTSLKDFKEFADVLEAI-KDRGVAVAVASPDDVDAANKERANLFEVKKA 801 (802)
Q Consensus 729 ~~~~~~~~~~g~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~-~~~~~~~vvg~~~~i~~~~~~~~~~~~~~~~ 801 (802)
+.....+.+.|.+++.++.++++|.+||++||+++.++|+.+ .+...+|+++..+.+.+..++...-|+|+..
T Consensus 904 ~~~s~~~~~sg~~~~~~qa~re~~l~vt~~di~~~~~~yl~~~~~e~~i~~~~~~e~~~e~~~~~g~~~~ve~~ 977 (978)
T COG1026 904 GSKSFYRDLSGLTDEERQAFRERLLDVTKEDIKEVMDKYLLNFSSENSIAVFAGEEKPQENFETLGFNVEVEEL 977 (978)
T ss_pred ehhhHHHHHhcCCHHHHHHHHHHHhcCcHHHHHHHHHHHHhcccccceEEEEechhhhhhhhhhcCcceeeeeC
Confidence 888888889999999999999999999999999999999985 2457788899888888888877666888754
No 3
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=1.1e-100 Score=913.12 Aligned_cols=788 Identities=35% Similarity=0.564 Sum_probs=689.1
Q ss_pred CcccccCC---CcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCH
Q 003700 1 MSVSNDDE---NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNT 77 (802)
Q Consensus 1 ~~~~~~~~---~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~ 77 (802)
+|+.++|+ +++|.+++++.|.+.+|+||+||||+|+||++||..+++..+..+.+|+++||+|+.|+|+|++++.+.
T Consensus 104 l~~~~~d~~~~~~~f~i~f~T~~~d~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~gl~~~lNA~T~~D~T~Y~~~~~~e 183 (1119)
T PTZ00432 104 ISLKTNDSSGKEMCFDFYVPTPPHNDKGIPHILEHSVLSGSKKYNYKDSFSLLVQGGFNSFLNAYTFKDRTSYLFASTNE 183 (1119)
T ss_pred EEEecCCCccceeEEEEEecCCCCCCcchhHHHHHHHhCCCCCCCcccHHHHHHhcCcCCCccccCCCCceEEEeccCCH
Confidence 35677775 899999999999999999999999999999999999999888766778999999999999999988777
Q ss_pred HhHHHHHHHHhhcccCCCCcccchhhhhhccccccCCC--------------CCCCcchhHHHhhhhhccCChHHHHHHH
Q 003700 78 KDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNP--------------SEDITYKGVVFNEMKGVYSQPDNILGRA 143 (802)
Q Consensus 78 ~~~~~~l~~~~d~~~~p~~~~~~~~~~~e~~~~e~~~~--------------~~~~~e~~~v~~e~~~~~~~~~~~~~~~ 143 (802)
+++.++|++|+|++++|.|.+++.+|.|||||+|++++ +.+...||||++||++..++|..++++.
T Consensus 184 ~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Emk~~~~~p~~~~~~~ 263 (1119)
T PTZ00432 184 KDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEMKKRFSDPLSFGYSV 263 (1119)
T ss_pred HHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHHHHhhCCHHHHHHHH
Confidence 89999999999999999999998678999999999764 2334459999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCcCccCCCCHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhccccccc-----------
Q 003700 144 AQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE----------- 212 (802)
Q Consensus 144 ~~~~l~~~~~~~~~~~G~~~~i~~~t~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~----------- 212 (802)
+.+.+| +|||+++++|++++|.++|+++|++||++||+|+||+|+++||+|+++++++++ ..|+.++
T Consensus 264 ~~~~lf-~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~-~~f~~~~~~~~~~~~~~~ 341 (1119)
T PTZ00432 264 IYQNLF-SNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVD-NYLTKHPKTGQLSHTAYR 341 (1119)
T ss_pred HHHHHh-CCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHH-HHHhhccccccccccccc
Confidence 999999 999999999999999999999999999999999999999999999999999887 3331100
Q ss_pred ------cc------c-c---------c-cCC----CCc---c---------------h----------------------
Q 003700 213 ------FS------L-R---------E-NNT----GSF---P---------------R---------------------- 225 (802)
Q Consensus 213 ------~~------~-~---------~-~~~----~~~---~---------------~---------------------- 225 (802)
.+ . + . ... ..+ | .
T Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~lLggg~sS~L~q 421 (1119)
T PTZ00432 342 EDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNYLLLGTPESVLYK 421 (1119)
T ss_pred ccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHHHHHHcCCCccHHHH
Confidence 00 0 0 0 000 000 0 0
Q ss_pred --------------------------------------------------------------------------------
Q 003700 226 -------------------------------------------------------------------------------- 225 (802)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (802)
T Consensus 422 ~LrE~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef~~r 501 (1119)
T PTZ00432 422 ALIDSGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEFVMK 501 (1119)
T ss_pred HHHhcCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhh
Confidence
Q ss_pred ---------hHHHHHhhhcccccCCCCccCcccchHHHHHHHHHhccCCcchHHHHHHHhhccCCCeeEEEEecCc--ch
Q 003700 226 ---------GLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDP--EK 294 (802)
Q Consensus 226 ---------~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~~--~~ 294 (802)
|+.++..+...|.++++|.+.|++...+..|+.++. .+..||++|+++||++|.|.+.+++.|++ +.
T Consensus 502 E~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~--~~~~y~e~Li~k~ll~N~h~~~v~~~p~~s~~~ 579 (1119)
T PTZ00432 502 ELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRID--NESKYLEKLIEKHLLNNNHRVTVHLEAVESSKY 579 (1119)
T ss_pred hccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHh--cccHHHHHHHHHHccCCCeeeEEEEecCCcccH
Confidence 000001112356677788888888888999988874 23469999999999999999999999999 89
Q ss_pred hhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCCCCccccccCCCCCCCCCCCCCCCCCCcc-----------
Q 003700 295 ASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEV----------- 363 (802)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~t~~el~~~~~~~~~~~~~~~~~~~~~~l~~lp~~t~~dl~~~~~~~p~~~----------- 363 (802)
.+...+.+++++++++..+|+++++++.++.+.++++|+.+++++.+++||.++++||++..+.+|...
T Consensus 580 ~~~~~~~e~~~L~~~~~~Ls~ee~~~i~~~~~~l~~~q~~~~~~e~l~~lP~l~~~DI~~~~~~~~~~~~~~~~~~~~~~ 659 (1119)
T PTZ00432 580 EKEFNKLVKDELKERLSHLTKEQVDEMEKAYEKFKKEREADDDPEHLDSFPILSLSDLNKETEEIPTKLYKLSSDSLKEN 659 (1119)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCChhHHhhcCCCcHHHcCCcccCCcchhhhccccccccc
Confidence 998999999999999999999999999999999999999999999999999999999998888777654
Q ss_pred ----cccCCceEEEeecCCCceEEEEEEeeCCCCCcccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeeec
Q 003700 364 ----GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTS 439 (802)
Q Consensus 364 ----~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~~ 439 (802)
...+|+++++++.+++|++|+++.|+++.++.++.+++.+|+.+|...||++++++|+...++..+||+++++...
T Consensus 660 ~~~~~~~~~~~~~~~~~~TnGi~y~~~~fdl~~l~~e~~~yl~L~~~~l~~~gT~~~s~~el~~~i~~~tGg~~~~~~~~ 739 (1119)
T PTZ00432 660 MDLDSDGGSVTVLVHPIESRGILYLDFAFSLDSLTVDELKYLNLFKALLKENGTDKLSSEEFTYKREKNLGGLSASTAFY 739 (1119)
T ss_pred ccccccCCCcceEEEecCCCCeEEEEEEecCCCCCHHHHhhHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCeEEEEEEe
Confidence 3468999999999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred cC------CCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHh
Q 003700 440 SI------HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDA 513 (802)
Q Consensus 440 ~~------~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~ 513 (802)
+. .+.+.+..++.++++|+.++++++++|+.+++.++.|++.++++.++.+.++++++.+.+.||.+|..++.+
T Consensus 740 ~~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~~~~~~~~Gh~~A~~~~~s 819 (1119)
T PTZ00432 740 SETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGMKTVFSSKGHKFALKRMKS 819 (1119)
T ss_pred ccccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh
Confidence 43 234556789999999999999999999999999999998888999999999999999999999999999999
Q ss_pred ccChhhHHHHHhccchHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCC
Q 003700 514 KLNTAGWISEQMGGVSYLEFLQALE-EKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPT 592 (802)
Q Consensus 514 ~~~~~~~~~~~~~g~~~~~~l~~l~-~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~ 592 (802)
.+++.+.+.+.++|++++.+++++. +.++++++.+.+.|..+++++|+++|+.+.|+||.+..+.+.+.+..++..|+.
T Consensus 820 ~~S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v~~~L~~i~~~i~~~~~l~~~vt~~~~~~~~~~~~~~~~~~~l~~ 899 (1119)
T PTZ00432 820 KFSVSDYADELVNGYSQLLFLKETLVPLAEKDWSKVESKLNEIRNKLLSMKNLTVNVTGDSELLDSLLDDSTTFLKKLSS 899 (1119)
T ss_pred cCCHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCcCCcEEEEEeCHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999987 555677888999999999999999999999999997777787888888887752
Q ss_pred CC---C--ccccccc--------ccCCCCcEEEEcCCCceEEEeecccCCCCCCcchHHHHHHHHhcCccchHhhhhcCC
Q 003700 593 NS---P--VERVKWK--------AHLPSANEAIVIPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGG 659 (802)
Q Consensus 593 ~~---~--~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~al~ll~~iLg~s~L~~~iRekg~ 659 (802)
.. . .....+. ......++.+.+|.+|+|++++++...+++++.+++.|+..+|+.++||++||++||
T Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~p~~V~yv~~~~~~~~~~~~~~~~l~Vl~~~L~~~yLw~~IR~~GG 979 (1119)
T PTZ00432 900 TFKENDNKSSDKVWVKEVLDKKLMESVDKNEFIVLPTRVNFVGMGGKLFDKSDKVDGSFQVIVHYLKNSYLWKTVRMSLG 979 (1119)
T ss_pred ccccccccccccccccccccccccCCcccceEEEccCceeEEEEecccccCCCccCHHHHHHHHHHccccchHHHcccCC
Confidence 21 1 1111121 112225678889999999999877777888999999999999999999999999999
Q ss_pred CCCccccccCCCceEEEEEEeCCChHHHHHHHHhHHHHHhc--CCCCHHHHHHHHHHHHhhcccCCChHHHHHHHHHHHH
Q 003700 660 AYGGFCDFDSHSGVFSFLSYRDPNLLKTLDIYDGTVDFLRE--LEMDDDTLTKAIIGTIGDVDAYQLPDAKGYSSLLRHL 737 (802)
Q Consensus 660 aY~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~ite~eL~~ak~~l~~~~~~~~~~~~~~~~~~~~~~ 737 (802)
|||+++.+. ..|.+.|++|||||+.+|+++++++.+++++ ..+|++||++||.+.+++++.+.+|...+...+.+++
T Consensus 980 AYG~~~~~~-~~G~~~f~SYRDPn~~~Tl~~f~~~~~~l~~~~~~~~~~~l~~~iig~~~~~D~p~~p~~~g~~~~~~~l 1058 (1119)
T PTZ00432 980 AYGVFADLL-YTGHVIFMSYADPNFEKTLEVYKEVASALREAAETLTDKDLLRYKIGKISNIDKPLHVDELSKLALLRII 1058 (1119)
T ss_pred ccccCCccC-CCCeEEEEEecCCCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHH
Confidence 999998887 4699999999999999999999999999998 5699999999999999999999999999999999999
Q ss_pred hCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEcChhhHHHhhhhhc
Q 003700 738 LGITEEERQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVASPDDVDAANKERA 793 (802)
Q Consensus 738 ~g~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg~~~~i~~~~~~~~ 793 (802)
.|.+.+.+++++++|.++|++||+++|++|+...+...+||||+.++|+.....+.
T Consensus 1059 ~g~t~e~rq~~R~~il~~t~edi~~~a~~~~~~~~~~~~~v~g~~~~~~~~~~~~~ 1114 (1119)
T PTZ00432 1059 RNESDEDRQKFRKDILETTKEDFYRLADLMEKSKEWEKVIAVVNSKTSDTAPSDFK 1114 (1119)
T ss_pred cCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhccCeEEEEECHHHhhhccchhh
Confidence 99999999999999999999999999999999767789999999999988766543
No 4
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3e-59 Score=485.02 Aligned_cols=769 Identities=20% Similarity=0.254 Sum_probs=567.0
Q ss_pred EEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHhhcccC
Q 003700 14 IVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFF 93 (802)
Q Consensus 14 ~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~d~~~~ 93 (802)
+...+|..+..|++|.|||++|.||++||.+.++....++++| ++||+|..|+|.|.++++..+.|-++|.+|+|.++.
T Consensus 46 f~v~TEa~~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l~-dtNAwTDtD~T~YtLStag~dGFlklLPvy~dHiL~ 124 (1022)
T KOG0961|consen 46 FSVVTEADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLA-DTNAWTDTDHTAYTLSTAGSDGFLKLLPVYIDHILT 124 (1022)
T ss_pred EEeeeeecCCCCCchhHHHHhhhccccCCcccHHHHhhcchhc-ccccccccCcceEEeecccccchHHHhHHHHHhhcC
Confidence 3456899999999999999999999999999998888777755 599999999999999998999999999999999999
Q ss_pred CCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCC-CCCCCCCCCCCcCccCCCCHHH
Q 003700 94 PKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFP-DNAYGVDSGGDPKVIPKLTFEE 172 (802)
Q Consensus 94 p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~G~~~~i~~~t~~~ 172 (802)
|.++++. |..|++|+.-++ .++|||++||+..+++-..++.+..++.+|| .++|+..++|-+..++.+|.|.
T Consensus 125 P~Ltdea--f~TEVyHI~geg-----~d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY~~eTGG~~knLR~lt~ek 197 (1022)
T KOG0961|consen 125 PMLTDEA--FATEVYHITGEG-----NDAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGYAVETGGRLKNLRELTLEK 197 (1022)
T ss_pred cccchhh--hhhheeeecCCC-----CccceeehhhhhhhcccchhhhhhhheeecCCCCCceeccCCChhhHHHhhHHH
Confidence 9999999 999999987554 2689999999998899999999999999999 9999999999999999999999
Q ss_pred HHHHHHhccCCCCeEEEEEeCCCHHHHHHHhh-------------------------------hcccccccccccccCCC
Q 003700 173 FKEFHRKYYHPSNARIWFYGDDDPNERLRILS-------------------------------EASMNTIEFSLRENNTG 221 (802)
Q Consensus 173 l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~-------------------------------~~~~~~~~~~~~~~~~~ 221 (802)
+|+||+++|+|+||+++|+|++|++++++..+ +...+++||+..++.++
T Consensus 198 IR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~~i~e~t~~tVefp~~Des~G 277 (1022)
T KOG0961|consen 198 IRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALSDIKESTVHTVEFPTDDESRG 277 (1022)
T ss_pred HHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCcccCCccceeeeecCCcccccc
Confidence 99999999999999999999999999998876 00111222221100000
Q ss_pred -------------------------------------------------------------------Ccch---------
Q 003700 222 -------------------------------------------------------------------SFPR--------- 225 (802)
Q Consensus 222 -------------------------------------------------------------------~~~~--------- 225 (802)
..|.
T Consensus 278 ~v~~aW~g~s~sD~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~~~vrc~i~L~f~gVP~EKi~~~~~k 357 (1022)
T KOG0961|consen 278 AVEVAWFGHSPSDLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIAEGVRCDIRLNFAGVPVEKIDECAPK 357 (1022)
T ss_pred eEEEEEcCCCHHHhhhHHHHHHHHHHhccccccccccceEEecCccccceeeeeecccceeEEEeecCCcHHHhhhhhHH
Confidence 0000
Q ss_pred hHHHHHh-------h------hccccc----CCCCcc-Cc---------------ccchHHHHHH--HHHhccCCcchHH
Q 003700 226 GLSLMLR-------S------MGKWIY----DMNPFE-PL---------------KYEKPLMALK--ARLAEEGSKAVFS 270 (802)
Q Consensus 226 ~~~~~~~-------~------~~~~~~----~~~~~~-~l---------------~~~~~l~~l~--~~l~~~~~~~~~~ 270 (802)
.+.++.. . ...|.+ ...+.. .+ .+-..+.+|. +.|. +++..+|.
T Consensus 358 ~l~~l~et~~iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~ygnedg~~l~~~lk~l~~~~~L~-~w~~kdW~ 436 (1022)
T KOG0961|consen 358 FLDKLVETANIDMERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQLYGNEDGELLKKRLKELDFLKKLK-SWPAKDWV 436 (1022)
T ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhhccCcchhHHHHHHHhHHHHHHHh-hccHHHHH
Confidence 0111100 0 001111 111100 00 0011122221 1232 45667999
Q ss_pred HHHHHhhccCCCeeEEEEecCcchhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCCCCccccccCCCCCCC
Q 003700 271 PLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLR 350 (802)
Q Consensus 271 ~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~t~~el~~~~~~~~~~~~~~~~~~~~~~l~~lp~~t~~ 350 (802)
+|..++|++ +.++++++.|.....+++.++..+.++++...+.++.++.+-+.++..+..+.++-+...+..+-...++
T Consensus 437 ~Llnk~Fve-n~s~tVia~Ps~em~e~i~kE~~~~i~~r~~~lg~~gle~l~k~L~~ak~~N~~~~p~~ll~~f~I~~pe 515 (1022)
T KOG0961|consen 437 QLLNKYFVE-NPSATVIAVPSEEMVEKIAKEEEKRIAARCEKLGKKGLEELGKSLEAAKLENTANHPSALLLDFLIVKPE 515 (1022)
T ss_pred HHHHHHhcc-CCCeEEEecCcHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHhhhcccCCCCHHHHhheeccCch
Confidence 999999984 4567889999999888899899999999999999999999999888888777766555444443222221
Q ss_pred CC-----------CCCCCC----CCCcccccCCceEEEeec-CCCceEEEEEEeeCCCCCcccccChHHHHHhhhh----
Q 003700 351 DI-----------PKEPIR----VPTEVGDINGVKVLQHDL-FTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKE---- 410 (802)
Q Consensus 351 dl-----------~~~~~~----~p~~~~~~nG~~v~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~---- 410 (802)
.| ...-.. -|...+.....+..++-. .+..+|.+.++.+.++++...++|+.+|..++..
T Consensus 516 S~ef~~~~~v~t~~s~~pfdne~~~~~~T~~~~fp~fi~l~h~ps~Fvel~fl~dss~i~~sl~pYl~~f~~l~~~~pa~ 595 (1022)
T KOG0961|consen 516 SLEFFDRFPVQTLTSNSPFDNELTPQQSTFLAQFPFFINLHHCPSKFVELFFLLDSSNISISLRPYLFLFTDLLFESPAM 595 (1022)
T ss_pred heeeeeccceeeccCCCCCCccccceeecccccCCceeecccCchHHHhHhhhhccccCchhhhhHHHHHHHHHhcCHHH
Confidence 11 110000 011112223333333311 2344777777778888888889999999876643
Q ss_pred -cCCCC----CCHHHHHHHHhhcccceEEeeeeccCCCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHH
Q 003700 411 -MGTKD----LSFVQLDQLIGRKTGGISVYPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFK 485 (802)
Q Consensus 411 -~Gt~~----~s~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~ 485 (802)
.||-. .+.+++.+.+.....+.++.++. .+.+++.+.+.++|..++++.+++|+.-++....|| ++|+.
T Consensus 596 ldgtiptp~~~s~~~v~~~~~s~~id~si~~g~-----~G~~~~lvn~~Ikv~a~~Y~~~v~Wi~~~l~~~VfD-~~Ri~ 669 (1022)
T KOG0961|consen 596 LDGTIPTPVLTSADDVAKHFTSDLIDHSIQVGV-----SGLYDRLVNLRIKVGADKYPLLVKWIQIFLQGVVFD-PSRIH 669 (1022)
T ss_pred hcCCCCcchhhhHHHHHHHHHhhhhhhhhcccc-----cccchhheeEEEEEccCCcchhHHHHHHHhhhhccC-HHHHH
Confidence 35432 36677777666665555555553 133568899999999999999999999999999999 69999
Q ss_pred HHHHHHHHHhhhhhccCcHHHHHHHHHhccChhhHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCc
Q 003700 486 QFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGC 565 (802)
Q Consensus 486 ~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~ 565 (802)
.++++...++..+.+ +|..++.....+.++....+......+-...-++.+.+.++.+.+.+++.++++++-.+.-+.+
T Consensus 670 ~~~~~~l~~i~~~KR-dg~~vlss~~~~~lY~~~slk~s~d~L~~Ek~l~ei~~~v~n~~~~Il~~~e~mR~y~l~~n~~ 748 (1022)
T KOG0961|consen 670 QCAQKLLGEIRDRKR-DGCTVLSSAVASMLYGKNSLKISFDELVLEKLLEEISKDVMNNPEAILEKLEQMRSYALFSNGV 748 (1022)
T ss_pred HHHHHHHhhhhhhhc-CccEehHHHHHHHHhcccchhhcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcce
Confidence 999999999999887 4566666666666666666666666676777778887777778888999999988855577899
Q ss_pred EEEEEeCccchhhHHHHHHHHHhcCCCCCCcccccc--c------ccCCCCcEEEEcCCC---ceEEEeeccc-CCCCCC
Q 003700 566 LINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKW--K------AHLPSANEAIVIPTQ---VNYVGKAANI-FETGYK 633 (802)
Q Consensus 566 ~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~------~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~ 633 (802)
.+.|+||++..+.....|.....+..-+.+...... . ....+....+.++.+ .+....+.|+ .++.+|
T Consensus 749 ~ihvvgDI~kid~~~~~Wn~l~~~~~~~nP~~~f~~tf~~~~~~s~e~gsssk~~~I~~p~sESs~l~~sip~~~~w~dp 828 (1022)
T KOG0961|consen 749 NIHVVGDIDKIDPKMLSWNWLQADPRFGNPGHQFSATFEAGENVSLELGSSSKELLIGVPGSESSFLYQSIPLDANWNDP 828 (1022)
T ss_pred EEEEEeehhcCCccccCchhhhcCcccCCchhhcccccccCcccceeccCCcceeEecCCCccccceeeecccccccCCc
Confidence 999999999877776667766665433322111111 0 011122233444333 2233344443 568899
Q ss_pred cchHHHHHHHHhc--CccchHhhhhcCCCCCccccccCCCceEEEEEEeCCChHHHHHHHHhHHHHHhc--CCCCHHHHH
Q 003700 634 LNGSAYVISKHIS--NVWLWDRVRVSGGAYGGFCDFDSHSGVFSFLSYRDPNLLKTLDIYDGTVDFLRE--LEMDDDTLT 709 (802)
Q Consensus 634 d~~al~ll~~iLg--~s~L~~~iRekg~aY~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~ite~eL~ 709 (802)
.++...+++++|+ .+.+|+.||+.|+|||+++...++.+.+++.+|+.+++.++.+.-+.++..+.. ..+++.+++
T Consensus 829 el~~~~l~~~YL~~~eGPfW~~IRG~GLAYGanm~~~~d~~~~~~~iyr~ad~~kaye~~rdiV~~~vsG~~e~s~~~~e 908 (1022)
T KOG0961|consen 829 ELIPAMLFGQYLSQCEGPFWRAIRGDGLAYGANMFVKPDRKQITLSIYRCADPAKAYERTRDIVRKIVSGSGEISKAEFE 908 (1022)
T ss_pred chhHHHHHHHHHHhcccchhhhhcccchhccceeEEeccCCEEEEEeecCCcHHHHHHHHHHHHHHHhcCceeecHHHhc
Confidence 9999999999999 789999999999999999999999999999999999999999998888888754 569999999
Q ss_pred HHHHHHHhhcccCC--ChHHHHHHHHHHHHhCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhh---CCCeEEEEcChhh
Q 003700 710 KAIIGTIGDVDAYQ--LPDAKGYSSLLRHLLGITEEERQRRREEILSTSLKDFKEFADVLEAIK---DRGVAVAVASPDD 784 (802)
Q Consensus 710 ~ak~~l~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~---~~~~~~vvg~~~~ 784 (802)
.||.+.+..+...+ ...+.+..+......+.+-+....+.++|.+||.+|+.+..+.|+.+. ...+.+|..++.+
T Consensus 909 gAk~s~~~~~~~~Eng~~~~a~~~~~l~~~~q~~~~fn~~~leri~nvT~~~~~~~~~~y~~~~Fds~~~va~i~~hpaK 988 (1022)
T KOG0961|consen 909 GAKRSTVFEMMKRENGTVSGAAKISILNNFRQTPHPFNIDLLERIWNVTSEEMVKIGGPYLARLFDSKCFVASIAVHPAK 988 (1022)
T ss_pred cchHHHHHHHHHHhccceechHHHHHHHHHHhcCCcccHHHHHHHHHhhHHHHHHhcccceehhhcccCceEEEeccHHH
Confidence 99999999887643 345555566666677777788889999999999999999999997742 3455666689999
Q ss_pred HHHhhhhhccc-cchh
Q 003700 785 VDAANKERANL-FEVK 799 (802)
Q Consensus 785 i~~~~~~~~~~-~~~~ 799 (802)
+++..+.|..- +.|+
T Consensus 989 le~~~e~F~e~gf~V~ 1004 (1022)
T KOG0961|consen 989 LEEMKEAFPEGGFKVK 1004 (1022)
T ss_pred HHHHHHHhhcCCceEE
Confidence 99999998832 5543
No 5
>PRK15101 protease3; Provisional
Probab=100.00 E-value=3.7e-58 Score=558.45 Aligned_cols=705 Identities=13% Similarity=0.089 Sum_probs=475.8
Q ss_pred CcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHh
Q 003700 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (802)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~ 88 (802)
..+|++|+..||.++.|+|||||||+|+||++||..+.+.+.+ ...|+.+||+|+.|+|+|++. ++.++++.+|++++
T Consensus 69 ~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l-~~~Gg~~NA~T~~d~T~y~~~-~~~~~l~~aL~~~a 146 (961)
T PRK15101 69 ALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFL-KKHGGSHNASTASYRTAFYLE-VENDALPPAVDRLA 146 (961)
T ss_pred EEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHH-HHhCCCccceECCCceEEEEE-cCHHHHHHHHHHHH
Confidence 3468999999999999999999999999999998655466777 556999999999999999985 47899999999999
Q ss_pred hcccCCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCC
Q 003700 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKL 168 (802)
Q Consensus 89 d~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~~ 168 (802)
|++.+|.|++++ +++| |++|.+|+++..++|..++.+.+.+.+|++|||+++.+|++++|+++
T Consensus 147 d~~~~P~f~~~~--~erE---------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~~~G~~etl~~~ 209 (961)
T PRK15101 147 DAIAEPLLDPKN--ADRE---------------RNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRFSGGNLETLSDK 209 (961)
T ss_pred HHHhccCCCHHH--HHHH---------------HHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccCCCCCHHHhhcC
Confidence 999999999999 8765 99999999988899999999999999999999999999999999998
Q ss_pred ----CHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhcccccccccccccCCCCcc-hh---HHHHHhh-------
Q 003700 169 ----TFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFP-RG---LSLMLRS------- 233 (802)
Q Consensus 169 ----t~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~------- 233 (802)
++++|++||++||+|+||+|+|+||+|++++.++++ +.|+.++......+....| .. .......
T Consensus 210 ~~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~-~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (961)
T PRK15101 210 PGSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAA-DTFGRVPNKNASVPEITVPVVTDAQKGIIIHYVPAQPRK 288 (961)
T ss_pred CchHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHH-HHhccCCCCCCCCCCCCCCCCCHHHcCeEEEEEECCCCc
Confidence 699999999999999999999999999999999997 7888876432111110001 00 0000000
Q ss_pred --hcccccCCCCccCcccchHHHHHHHHHhccCCcchHHHHHHHhhcc--------------CCCeeEEEEecCc-chhh
Q 003700 234 --MGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILN--------------NPHCVTVEMQPDP-EKAS 296 (802)
Q Consensus 234 --~~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~~~~~~~~l~~~~~~~--------------~~~~~~~~~~p~~-~~~~ 296 (802)
.-.|..+... .... ......+...++++.++++++.|.++.++. +.|.+.+.+.|.+ ...+
T Consensus 289 ~l~l~~~~p~~~-~~~~-~~~~~~l~~ll~~~~~g~l~~~L~~~gla~~v~s~~~~~~~~~~g~f~i~~~~~~~~~~~~~ 366 (961)
T PRK15101 289 VLRVEFRIDNNS-AKFR-SKTDEYISYLIGNRSPGTLSDWLQKQGLAEGISAGADPMVDRNSGVFAISVSLTDKGLAQRD 366 (961)
T ss_pred EEEEEEecCCcH-HHHh-hCHHHHHHHHhcCCCCCcHHHHHHHcCccceeeeccccccCCCceEEEEEEEcChHHHHhHH
Confidence 0011111100 0000 112344555566555555666665544321 1233444444432 1233
Q ss_pred HHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcCCCC------------------------------Ccccccc--
Q 003700 297 RDEAAEKEILAKV-KSSMTKEDLAELARATEELRLKQETPD------------------------------PPEALRS-- 343 (802)
Q Consensus 297 ~~~~~~~~~l~~~-~~~~t~~el~~~~~~~~~~~~~~~~~~------------------------------~~~~l~~-- 343 (802)
...+.+.++++.+ ..|+++++++++|+.+.....+.+... +++.+..
T Consensus 367 ~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~ 446 (961)
T PRK15101 367 QVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTMLRVPVEHTLDAPYIADRYDPKAIKARL 446 (961)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhhhCCHHHheeCchhhhcCCHHHHHHHH
Confidence 4555666666665 899999999999986543111111000 0000000
Q ss_pred --C-----------CCCCC-------------CC-------------------CCCCCCC---------------CCCcc
Q 003700 344 --V-----------PSLSL-------------RD-------------------IPKEPIR---------------VPTEV 363 (802)
Q Consensus 344 --l-----------p~~t~-------------~d-------------------l~~~~~~---------------~p~~~ 363 (802)
+ |..+. ++ +|...+. .|...
T Consensus 447 ~~l~~~n~~i~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~~~~~l~lP~~n~fip~~~~~~~~~~~~~~p~~i 526 (961)
T PRK15101 447 AEMTPQNARIWYISPQEPHNKTAYFVDAPYQVDKISEQTFADWQQKAQNIALSLPELNPYIPDDFSLIKADKAYKHPELI 526 (961)
T ss_pred hhcCHhHEEEEEEeCCCCCCccccccCCcceeecCCHHHHHHHhcCCCCccCCCCCCCCccCCCCeeccCCCCCCCCeEE
Confidence 0 10000 00 1111111 13334
Q ss_pred cccCCceEEEeecC---CCceEEEEEEeeCCCC--CcccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeee
Q 003700 364 GDINGVKVLQHDLF---TNDVLYTEVVFDMSSL--KQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFT 438 (802)
Q Consensus 364 ~~~nG~~v~~~~~~---~~~~v~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~ 438 (802)
...||++||+.+++ ..+.+.+.+.|..+.. ++...+...++..++. .+..++....+..|.+++.+ +
T Consensus 527 ~~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~~ll~------~~l~e~~y~a~~aG~~~~~~-~- 598 (961)
T PRK15101 527 VDEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALNDYLAG------LALDQLSNQASVGGISFSTN-A- 598 (961)
T ss_pred EcCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHHHHHH------HHHHHHhchHHhcCcEEEEc-c-
Confidence 57799999999876 6788899988877653 3344455667777652 35555655555566666666 3
Q ss_pred ccCCCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChh
Q 003700 439 SSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTA 518 (802)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 518 (802)
.+++.+++++++++++.+++++.+++.+|.|+ +++++.++....+++++...+.+...+...+.. +..
T Consensus 599 ---------~~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~-~~~fe~~k~~~~~~l~~~~~~~~~~~~~~~~~~--~~~ 666 (961)
T PRK15101 599 ---------NNGLMVNANGYTQRLPQLLQALLEGYFSFTPT-EEQLAQAKSWYREQLDSAEKGKAYEQAIMPAQM--LSQ 666 (961)
T ss_pred ---------CCCEEEEEEecChhHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHHHhhhcccCcHHHHHHHHHH--Hhc
Confidence 68899999999999999999999999999999 478888888888777765544443333322111 112
Q ss_pred hHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCcc-
Q 003700 519 GWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVE- 597 (802)
Q Consensus 519 ~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~- 597 (802)
+++.. ..+..+.+..+ ..++|++||+++|.+.+++++|+||++ .+++...++++++.|+..+...
T Consensus 667 ~py~~---~~~~~~~l~~i----------t~edl~~f~~~~~~~~~~~~~v~GNi~-~~ea~~l~~~~~~~l~~~~~~~~ 732 (961)
T PRK15101 667 VPYFE---RDERRKLLPSI----------TLKDVLAYRDALLSGATPEFLVVGNLT-EEQVTTLARDVQKQLGADGTEWW 732 (961)
T ss_pred CCCCC---HHHHHHHHhcC----------CHHHHHHHHHHHHHhceEEEEEEcCCC-HHHHHHHHHHHHHHhccCCcccc
Confidence 22210 01122222222 368999999999999999999999998 5789999998988886432110
Q ss_pred cccccccCCCCcEEEEc-CC-CceEEEeecccCCCCCCcchHHHHHHHHhc---CccchHhhhhc-CCCCCccccccCCC
Q 003700 598 RVKWKAHLPSANEAIVI-PT-QVNYVGKAANIFETGYKLNGSAYVISKHIS---NVWLWDRVRVS-GGAYGGFCDFDSHS 671 (802)
Q Consensus 598 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~d~~al~ll~~iLg---~s~L~~~iRek-g~aY~~~~~~~~~~ 671 (802)
........+.....+.. +. ....+..++..+.. +..+..+++.+|| +++||++||++ |++|+|++++....
T Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~v~~~lLg~~~ssrlf~~LRtk~qLgY~V~s~~~~~~ 809 (961)
T PRK15101 733 RGKDVVVDKKQSVNFEKAGSSTDSALAAVYVPTGY---DEYQSSAYSSLLGQIIQPWFYNQLRTEEQLGYAVFAFPMSVG 809 (961)
T ss_pred cccceEeCCCCeEEEecCCCCCCCeEEEEEEeCCC---CCHHHHHHHHHHHHHHhHHHHHHHHHHhhhceEEEEEeeccC
Confidence 00000001111111222 11 12233333321111 3367777777777 68999999985 99999999988777
Q ss_pred ceEEEEEEeCC---ChHHHHHHHHhHHHHH--hcCCCCHHHHHHHHHHHHhhccc-CCChHHHHHHHHHHHH-hCCCHHH
Q 003700 672 GVFSFLSYRDP---NLLKTLDIYDGTVDFL--RELEMDDDTLTKAIIGTIGDVDA-YQLPDAKGYSSLLRHL-LGITEEE 744 (802)
Q Consensus 672 g~~~~~~~~~~---~~~~~~~~~~~~~~~l--~~~~ite~eL~~ak~~l~~~~~~-~~~~~~~~~~~~~~~~-~g~~~~~ 744 (802)
+.+++.++..+ .+....+.+...+..+ +-.++|++||+++|.++++++.. .+++...+.++|.... .+.+.++
T Consensus 810 ~~~~~~~~vqs~~~~~~~l~~~i~~f~~~~~~~l~~lt~eE~~~~k~~l~~~~~~~~~sl~~~a~~~~~~i~~~~~~fd~ 889 (961)
T PRK15101 810 RQWGMGFLLQSNDKQPAYLWQRYQAFFPQAEAKLRAMKPEEFAQYQQALINQLLQAPQTLGEEASRLSKDFDRGNMRFDS 889 (961)
T ss_pred CeeeEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCcCh
Confidence 77776665422 3333333333322221 12479999999999999999988 6788999998888764 5779999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHH-HHhhC
Q 003700 745 RQRRREEILSTSLKDFKEFADVL-EAIKD 772 (802)
Q Consensus 745 ~~~~~~~i~~vT~edi~~~a~~~-l~~~~ 772 (802)
.+++.+.|++||++||++++++| +.+..
T Consensus 890 ~~~~~~~i~~vT~edv~~~~~~~~~~~~~ 918 (961)
T PRK15101 890 RDKIIAQIKLLTPQKLADFFHQAVIEPQG 918 (961)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999998 56533
No 6
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-42 Score=378.94 Aligned_cols=705 Identities=16% Similarity=0.166 Sum_probs=464.9
Q ss_pred CCcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHH
Q 003700 8 ENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVY 87 (802)
Q Consensus 8 ~~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~ 87 (802)
.-+++++|+..+|.+..|+|||+|||+|.||++||..+-|...|+.. ||..||+|..++|+|+|.+ ..++|..+|+.+
T Consensus 48 aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskh-gGs~NA~T~~~~T~fyFeV-~~~al~~ALDrF 125 (937)
T COG1025 48 AALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKH-GGSHNASTAGERTAFYFEV-ENDALEGALDRF 125 (937)
T ss_pred eeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHc-CCccccccCCCceeEEEEe-cHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999666 8889999999999999965 678999999999
Q ss_pred hhcccCCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCC
Q 003700 88 FDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPK 167 (802)
Q Consensus 88 ~d~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~ 167 (802)
+|++..|.|.++. .++ ||.+|-+|..+..++..++.++....++-|+||+++.+.|+.+++..
T Consensus 126 a~ff~~PLf~~e~--~dR---------------E~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs~GN~~TL~~ 188 (937)
T COG1025 126 ADFFIEPLFNKEA--LDR---------------ERNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGNLETLSD 188 (937)
T ss_pred HHHHhccccChHH--HHH---------------HHHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccCCCChhhhcc
Confidence 9999999999988 655 59999999999999999999999999999999999999999999998
Q ss_pred ----CCHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhcccccccccccccCCCCcchhHH----HHHhhh-----
Q 003700 168 ----LTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFPRGLS----LMLRSM----- 234 (802)
Q Consensus 168 ----~t~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----- 234 (802)
-..++|++||++||+++||+++++|+-+++++.+++. ..|+.|+...+..+....|.-.+ .++...
T Consensus 189 ~p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~-~~F~~Ipn~~~~~p~~p~p~~~d~~t~~ii~i~p~~~~ 267 (937)
T COG1025 189 KPGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAA-DLFGDIPNRARKIPPIPVPVVTDEQTGKIIHIVPAKPR 267 (937)
T ss_pred CCCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHH-HHhCcCCCCCCCCCCCCCCCCChHHhCceEEeccCCCC
Confidence 5689999999999999999999999999999999997 89998886544333222221000 000000
Q ss_pred ----cccccCCCCccCcccchHHHHHHHHHhccCCcchHHHHHHHhhcc-------------CCCeeEEEEecCcc-hhh
Q 003700 235 ----GKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILN-------------NPHCVTVEMQPDPE-KAS 296 (802)
Q Consensus 235 ----~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~~~~~~~~l~~~~~~~-------------~~~~~~~~~~p~~~-~~~ 296 (802)
-.|.-..... ..+ ......+...++.+.++++..-|.++.++. +.|.+.+.++..+. .-+
T Consensus 268 ~~L~i~f~i~~~~~-~~~-~~~~~~~s~Lig~es~gsL~~~Lk~~Glit~l~a~~~~~~~n~~~f~is~~LT~~Gl~~~~ 345 (937)
T COG1025 268 PRLRIYFPIDDNSA-KFR-SKPDEYLSHLIGNESPGSLLAWLKKQGLITELSAGLDPISGNYGVFAISYELTDKGLAHYD 345 (937)
T ss_pred ceEEEEEEcCCccc-ccc-cCCHHHHHHHhccCCCchHHHHHHhccchhhhccccccccCCcceEEEEeehhhcchhhHH
Confidence 0011111110 010 233455566777666666666665555541 11444444554442 223
Q ss_pred HHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcCCCCC---------------cc---------------cc----
Q 003700 297 RDEAAEKEILAKV-KSSMTKEDLAELARATEELRLKQETPDP---------------PE---------------AL---- 341 (802)
Q Consensus 297 ~~~~~~~~~l~~~-~~~~t~~el~~~~~~~~~~~~~~~~~~~---------------~~---------------~l---- 341 (802)
.+.+...++++.+ ..++-...++++.+-......+.+...+ .+ .+
T Consensus 346 ~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~~p~~~~~~~~~~~~~yd~~~~~~~l 425 (937)
T COG1025 346 RVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVEHTLYASLVLPRYDPKAIQERL 425 (937)
T ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhcccCChhhhhchhhcccccCHHHHHHHH
Confidence 4566788888876 6777776666666544433332221100 00 00
Q ss_pred -------------cc------------CC-------------------CCCCCCCCCCCCCCCCc---------------
Q 003700 342 -------------RS------------VP-------------------SLSLRDIPKEPIRVPTE--------------- 362 (802)
Q Consensus 342 -------------~~------------lp-------------------~~t~~dl~~~~~~~p~~--------------- 362 (802)
+. .| .+.+ -+|...+.+|..
T Consensus 426 ~~~~pen~R~~lis~~~~~~~~a~~~~~py~v~~~~~~~~~~~~~~~~~~~l-~lP~~N~fIp~~~~~~~~~~~~~~p~l 504 (937)
T COG1025 426 ALMTPENARLWLISKLEEHDKAAYFYGFPYQVDDYTAQPLDAWQQKADSIEL-SLPEPNPFIPDDVSLIKSEKKFTFPQL 504 (937)
T ss_pred HhhCccceEEEEecCCCCccccceeecCcceecchhhhhhhhhhcccccccc-cCCCCCCCCCccccccccccCCCCchh
Confidence 00 00 0000 022222223321
Q ss_pred ccccCCceEEEeec-----CCCceEEEEEEeeCCCCCcccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeee
Q 003700 363 VGDINGVKVLQHDL-----FTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPF 437 (802)
Q Consensus 363 ~~~~nG~~v~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~ 437 (802)
+....|.+++++.. .+...+++.+..+....++.......+++.+.. --+.++++. +.-+|+++++.
T Consensus 505 l~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~~~la~-dal~~~~y~-------A~~aG~sfs~~ 576 (937)
T COG1025 505 LSEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYAYLAN-DALDKLSYQ-------ASLAGLSFSLA 576 (937)
T ss_pred hhcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHHHHHHH-HHHHhhhhH-------HHhcceEEEee
Confidence 12345677766532 123344444443333333333334445555444 344444443 34456666554
Q ss_pred eccCCCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccCh
Q 003700 438 TSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNT 517 (802)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 517 (802)
. ...++.+++++..+.++.++.-+-+.+.+-.++ ++++..++.++.+.+++...+.+...+...+.....+
T Consensus 577 ~--------~~~Gl~ltisGft~~lp~L~~~~l~~l~~~~~~-~~~f~~~K~~~~~~~~~a~~~~p~~~~~~~l~~l~~~ 647 (937)
T COG1025 577 A--------NSNGLDLTISGFTQRLPQLLRAFLDGLFSLPVD-EDRFEQAKSQLSEELKNALTGKPYRQALDGLTGLLQV 647 (937)
T ss_pred c--------CCCceEEEeeccccchHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHhhhhhCC
Confidence 2 147899999999999999999999999998888 6899999999999999999888888777776665544
Q ss_pred hhHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCcc
Q 003700 518 AGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVE 597 (802)
Q Consensus 518 ~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~ 597 (802)
..+ ...+.++.+. ....+++..|...++++..+.+.|.||++ .+++.++++.....++......
T Consensus 648 ~~~--------s~~e~~~~l~-------~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~-~~da~~l~~~~~~~l~~~~s~~ 711 (937)
T COG1025 648 PYW--------SREERRNALE-------SVSVEEFAAFRDTLLNGVHLEMLVLGNLT-EADATNLAETLQKKLPAIGSTW 711 (937)
T ss_pred CCc--------CHHHHHHHhh-------hccHHHHHHHHHHhhhccceeeeeeccch-HHHHHHHHHHHHhhhcccCCcc
Confidence 321 1122222221 12357888999999999999999999998 5677777766555554322110
Q ss_pred --cccccccCCCCcEEEEc--CCCceEEEeecccCCCC-CCcchHHHHHHHHhcCccchHhhhhc-CCCCCccccccCCC
Q 003700 598 --RVKWKAHLPSANEAIVI--PTQVNYVGKAANIFETG-YKLNGSAYVISKHISNVWLWDRVRVS-GGAYGGFCDFDSHS 671 (802)
Q Consensus 598 --~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~d~~al~ll~~iLg~s~L~~~iRek-g~aY~~~~~~~~~~ 671 (802)
.... ....++...... +.+.+-.+..+....++ .++.+...|+.+++. ..+|.+||.| .+.|-|++++....
T Consensus 712 ~~~~~~-~~~~~~~~~~e~~~~~~~~an~~i~~~~~~~~~~~~a~s~Ll~~l~~-~~ff~~LRTkeQLGY~Vfs~~~~v~ 789 (937)
T COG1025 712 YRNPSV-YLLKGGTRIFETVGGESDSANAAILYPQQYDEIKSSALSSLLGQLIH-PWFFDQLRTKEQLGYAVFSGPREVG 789 (937)
T ss_pred cCCCce-eccCCCeeEeeeccCCcccccceeEeccccchHHHHHHHHHHHHHHh-HHhHHHhhhhhhcceEEEecceeec
Confidence 0001 011112222222 11111111112122233 334445567777775 6789999975 89999999976543
Q ss_pred ceEEEEEE-eCCC--h---HHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhccc-CCChHHHHHHHHHHHHh-CCCHH
Q 003700 672 GVFSFLSY-RDPN--L---LKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDA-YQLPDAKGYSSLLRHLL-GITEE 743 (802)
Q Consensus 672 g~~~~~~~-~~~~--~---~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~-~~~~~~~~~~~~~~~~~-g~~~~ 743 (802)
+..++.++ ++++ + .+.++.|.+..+. .-.++++++++..|..+++++.. +.+....+.++|..... ..+.+
T Consensus 790 ~~~gi~f~vqS~~~~p~~L~~r~~~F~~~~~~-~l~~ms~e~Fe~~k~alin~il~~~~nl~e~a~r~~~~~~~g~~~Fd 868 (937)
T COG1025 790 RTPGIGFLVQSNSKSPSYLLERINAFLETAEP-ELREMSEEDFEQIKKALINQILQPPQNLAEEASRLWKAFGRGNLDFD 868 (937)
T ss_pred CccceEEEEeCCCCChHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHhccCCCCcC
Confidence 33333322 3332 2 2333344433332 23469999999999999999998 66888888888855443 34678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhh
Q 003700 744 ERQRRREEILSTSLKDFKEFADVLEAIK 771 (802)
Q Consensus 744 ~~~~~~~~i~~vT~edi~~~a~~~l~~~ 771 (802)
..++.++.++.+|++++.++....+...
T Consensus 869 ~~ek~i~~vk~LT~~~l~~f~~~~l~~~ 896 (937)
T COG1025 869 HREKKIEAVKTLTKQKLLDFFENALSYE 896 (937)
T ss_pred cHHHHHHHHHhcCHHHHHHHHHHhhccc
Confidence 8899999999999999999999988764
No 7
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-39 Score=362.00 Aligned_cols=706 Identities=16% Similarity=0.137 Sum_probs=450.4
Q ss_pred CCcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHH
Q 003700 8 ENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVY 87 (802)
Q Consensus 8 ~~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~ 87 (802)
...-+++||..||.+.+|+|||+|||+|.||++||..+.+...++.. |+..||+|..++|+|+|.. ..+.|+.+|+.+
T Consensus 52 aal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~-gGssNA~T~~e~T~y~F~V-~~~~l~~ALDrF 129 (974)
T KOG0959|consen 52 AALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKN-GGSSNAYTDSEHTNYYFDV-QHDHLEGALDRF 129 (974)
T ss_pred eeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhc-CCccccccccccceEEEec-chHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999999555 8899999999999999976 778899999999
Q ss_pred hhcccCCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCC
Q 003700 88 FDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPK 167 (802)
Q Consensus 88 ~d~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~ 167 (802)
++.+.+|.|.++. .++| +++|.+|.++..++..++..+....+.=|+|||++.++|+.++|..
T Consensus 130 aqFf~~Plf~~~a--~eRE---------------v~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~~tL~~ 192 (974)
T KOG0959|consen 130 AQFFSDPLFNKSA--TERE---------------VGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNKKTLLE 192 (974)
T ss_pred HHHhhCcccChHH--HHHH---------------HHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccchhhhhh
Confidence 9999999999998 7654 9999999999888888888888888888899999999999999999
Q ss_pred CC-----HHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhcccccccccccccCCC-CcchhHHHH---Hhh-----
Q 003700 168 LT-----FEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTG-SFPRGLSLM---LRS----- 233 (802)
Q Consensus 168 ~t-----~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~----- 233 (802)
.. ++.|++||++||++++|+++|+|+.+++.+..++. ..|+.++....+.+.. ..|.+...+ +.+
T Consensus 193 ~p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~-~~F~~i~N~~~~~p~f~~~p~~~e~~~~~~~v~pik~ 271 (974)
T KOG0959|consen 193 GPREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVT-RLFDEISNKKKPRPVFPEPPFLPEELKKLVRVVPIKD 271 (974)
T ss_pred ccccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHH-HHcccccccCCCCCcccCCCCChHHhCcEEEEEeccc
Confidence 98 99999999999999999999999999999999886 7888777543322111 111111111 000
Q ss_pred ----hcccccCCCCccCcccchHHHHHHHHHhccCCcchHHHHHHHhhcc-------------CCCeeEEEEecCcc-hh
Q 003700 234 ----MGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILN-------------NPHCVTVEMQPDPE-KA 295 (802)
Q Consensus 234 ----~~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~~~~~~~~l~~~~~~~-------------~~~~~~~~~~p~~~-~~ 295 (802)
.-.|.-+. ....-.......+...++.++.+++...|.+..|.. +.|.+.+-++..+- .-
T Consensus 272 ~~~l~is~~~p~--~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~~as~~~~f~v~idLtd~G~e~~ 349 (974)
T KOG0959|consen 272 GRSLMISWPVPP--LNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPEFASGYSFFNVSIDLTDEGLEHV 349 (974)
T ss_pred cceEEEEEecCC--cccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCccccccceEEEEEEeccccchhH
Confidence 00121111 000011334455666666666666777776665431 22334444444432 12
Q ss_pred hHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHcCCCCCcccc-------ccCCC---------------------
Q 003700 296 SRDEAAEKEILAKV-KSSMTKEDLAELARATEELRLKQETPDPPEAL-------RSVPS--------------------- 346 (802)
Q Consensus 296 ~~~~~~~~~~l~~~-~~~~t~~el~~~~~~~~~~~~~~~~~~~~~~l-------~~lp~--------------------- 346 (802)
+.......++++.+ ..+.-+.-++++...-.....+++...+.+.. ..+|.
T Consensus 350 ~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~~ll~~~~p~~i~~~ 429 (974)
T KOG0959|consen 350 DEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGSYLLTEFDPDLIQEV 429 (974)
T ss_pred HHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcchhhhhhcChHHHHHH
Confidence 44555677777766 44444444444443223333333332111110 00010
Q ss_pred --------------------------------CCCCCC-------------------CCCCC----------------CC
Q 003700 347 --------------------------------LSLRDI-------------------PKEPI----------------RV 359 (802)
Q Consensus 347 --------------------------------~t~~dl-------------------~~~~~----------------~~ 359 (802)
-..+|+ |.... +.
T Consensus 430 ~~~L~p~n~~v~~~s~~~~~~~d~~E~~ygt~y~~e~i~~~~~~~~~~~~~~~~l~lP~~nefI~t~f~~~~~~~~~~~~ 509 (974)
T KOG0959|consen 430 LSSLVPSNMRVILVSRSFEGKTDKAEPWYGTAYKVEDIPAEIIKEWENSHLNPELHLPTPNEFIPTDFSILPAPIPKLEY 509 (974)
T ss_pred HHhcCcccceeeeeeeccccccccccceeccccccccCCHHHHHHhhccCccccccCCCCCcccccccccccccCccccC
Confidence 000011 11111 11
Q ss_pred CCcccccCCceEEEeecC--CCceEEEEEEeeCC--CCCcccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEe
Q 003700 360 PTEVGDINGVKVLQHDLF--TNDVLYTEVVFDMS--SLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVY 435 (802)
Q Consensus 360 p~~~~~~nG~~v~~~~~~--~~~~v~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~ 435 (802)
|.-+......++|++.+. ..|-.++.+.|... .-.+.......++..++.. -...+. -.+..+|+.++
T Consensus 510 P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~d-~l~E~~-------Y~A~~aGl~~~ 581 (974)
T KOG0959|consen 510 PVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLKD-QLNEYL-------YPALLAGLTYS 581 (974)
T ss_pred CeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHHHHH-HHhHHH-------HHHHhccceEE
Confidence 211223345677766543 23344444444332 2222222334444444432 111111 11334455444
Q ss_pred eeeccCCCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhcc
Q 003700 436 PFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKL 515 (802)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 515 (802)
++. ...++.+++.+..+++..+++.+.+++.+-..+ ++++..+++...+.+.+...++|+..+.......+
T Consensus 582 ~~~--------s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~-~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~lll 652 (974)
T KOG0959|consen 582 LSS--------SSKGVELRVSGFNEKLPLLLEKVVQMMANFELD-EDRFEIIKELLKRELRNHAFDNPYQLANDYLLLLL 652 (974)
T ss_pred eee--------cCCceEEEEeccCcccHHHHHHHHHHHHhcccc-HHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHh
Confidence 432 156788999999999999999999999998866 68999999999999999888889988887766555
Q ss_pred ChhhHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCC
Q 003700 516 NTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSP 595 (802)
Q Consensus 516 ~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~ 595 (802)
-+..+ . ..+.++.+.. ..++++..|-..++++.-+...|.||++ .+++.++++.....+....+
T Consensus 653 ~~~~W-----~---~~e~~~al~~-------~~le~~~~F~~~~~~~~~~e~~i~GN~t-e~~A~~l~~~v~d~l~~~~~ 716 (974)
T KOG0959|consen 653 EESIW-----S---KEELLEALDD-------VTLEDLESFISEFLQPFHLELLIHGNLT-EKEALQLLKSVLDILKSAAP 716 (974)
T ss_pred hcccc-----c---hHHHHHHhhc-------ccHHHHHHHHHHHhhhhheEEEEecCcc-hHHHHHHHHHHHhhhhccCC
Confidence 43211 1 1122222211 2468888998888999999999999998 46677777766666622111
Q ss_pred cccccc--------cccCCCCcEEEE-cCCC---ce-EEEeecccCCCCCCcchHHHHHHHHhcCccchHhhhhc-CCCC
Q 003700 596 VERVKW--------KAHLPSANEAIV-IPTQ---VN-YVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVS-GGAY 661 (802)
Q Consensus 596 ~~~~~~--------~~~~~~~~~~~~-~~~~---~~-~~~~~~~~~~~~~~d~~al~ll~~iLg~s~L~~~iRek-g~aY 661 (802)
...... ....+.+...+. .... .+ -+..-+++-.....+..-+.++.+++. ..+|+.+|.| .+.|
T Consensus 717 ~~~p~~~~~~~~~~~~~lp~G~~~~~~~~~n~~~~ns~i~~~~Q~~~~~~~~~~~~~L~~~li~-ep~Fd~LRTkeqLGY 795 (974)
T KOG0959|consen 717 NSRPLFRSEHLPRREIQLPNGDYYFYRHLLNKTDDNSCIEVYYQIGVQDTRDNAVLGLLEQLIK-EPAFDQLRTKEQLGY 795 (974)
T ss_pred CCccccccccCcccceeccCCceEEEEcccccCCCCceEEEEEEcccchhHHHHHHHHHHHHhc-cchHHhhhhHHhhCe
Confidence 100100 011222222222 1211 11 111222332234456778889999997 5779999964 5555
Q ss_pred CccccccCCCceEEEEEE-eCC-Ch---HHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhccc-CCChHHHHHHHHHH
Q 003700 662 GGFCDFDSHSGVFSFLSY-RDP-NL---LKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDA-YQLPDAKGYSSLLR 735 (802)
Q Consensus 662 ~~~~~~~~~~g~~~~~~~-~~~-~~---~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~-~~~~~~~~~~~~~~ 735 (802)
-+++......|..++.+. +++ ++ +..++.+.+.....- ..+++++++.-+.+++..+.. +.+......+.|..
T Consensus 796 iv~~~~r~~~G~~~~~i~Vqs~~~~~~le~rIe~fl~~~~~~i-~~m~~e~Fe~~~~~lI~~~~ek~~~l~~e~~~~w~e 874 (974)
T KOG0959|consen 796 IVSTGVRLNYGTVGLQITVQSEKSVDYLEERIESFLETFLEEI-VEMSDEEFEKHKSGLIASKLEKPKNLSEESSRYWDE 874 (974)
T ss_pred EeeeeeeeecCcceeEEEEccCCCchHHHHHHHHHHHHHHHHH-HhcchhhhhhhHHHHHHHHhhcCcchhHHHHHHHHH
Confidence 555554434444444332 332 22 222333333222211 258999999999999999887 55666667777776
Q ss_pred -HHhCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 003700 736 -HLLGITEEERQRRREEILSTSLKDFKEFADVLEAI 770 (802)
Q Consensus 736 -~~~g~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~ 770 (802)
...+...+..+..++.+..+|++|+..+...++..
T Consensus 875 i~~~~y~f~r~~~~v~~l~~i~k~~~i~~f~~~~~~ 910 (974)
T KOG0959|consen 875 IIIGQYNFDRDEKEVEALKKITKEDVINFFDEYIRK 910 (974)
T ss_pred HHhhhhcchhhHHHHHHHHhhhHHHHHHHHHhhccc
Confidence 45566788888889999999999999999999874
No 8
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=3.2e-37 Score=341.80 Aligned_cols=396 Identities=15% Similarity=0.138 Sum_probs=309.2
Q ss_pred ccccCCceEEEeecCCCceEEEEEEeeCCCCCc--ccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeeecc
Q 003700 363 VGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ--ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSS 440 (802)
Q Consensus 363 ~~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~~~ 440 (802)
.++.||+++++.+.++.+.+.+.+++++|+..+ ...+.++++.+|++ .||++++..++.+.++..||..|++++
T Consensus 20 ~~L~nGl~~~~~~~~~~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~f-kgt~~~~~~~i~~~~~~~G~~~na~ts--- 95 (438)
T COG0612 20 FTLPNGLRVITYPNPTAPTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAF-KGTTGLPSAELAEAFEKLGGQLNAFTS--- 95 (438)
T ss_pred EEcCCCCEEEEEeCCCCCEEEEEEEEeecccCCCCCcccHHHHHHHHHc-cCCCCCChHHHHHHHHHhcCeeecccc---
Confidence 368999999999999899999999999876533 44455666677666 799999888999999999999999998
Q ss_pred CCCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhhH
Q 003700 441 IHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGW 520 (802)
Q Consensus 441 ~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 520 (802)
.+++.++++++++++++++++++|++.+|.|++ +.++..+....++++.... ++..++...+...+++.++
T Consensus 96 -------~d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~-~~~e~Ek~vil~ei~~~~d-~p~~~~~~~l~~~~~~~~p 166 (438)
T COG0612 96 -------FDYTVYYLSVLPDNLDKALDLLADILLNPTFDE-EEVEREKGVILEEIRMRQD-DPDDLAFERLLEALYGNHP 166 (438)
T ss_pred -------chhhhhhhhhchhhhHHHHHHHHHHHhCCCCCH-HHHHHHHHHHHHHHHhhcc-CchHHHHHHHHHHhhccCC
Confidence 688899999999999999999999999999995 5455444444444444433 3677888888888888888
Q ss_pred HHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCccccc
Q 003700 521 ISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVK 600 (802)
Q Consensus 521 ~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 600 (802)
+...+.| +.+.+..++ .++|++||+++|+|+||+|+|+||++ .+++...++++|+.|+...++ ...
T Consensus 167 ~~~~~~G--~~e~I~~it----------~~dl~~f~~k~Y~p~n~~l~vvGdi~-~~~v~~~~~~~f~~~~~~~~~-~~~ 232 (438)
T COG0612 167 LGRPILG--TEESIEAIT----------REDLKDFYQKWYQPDNMVLVVVGDVD-AEEVVELIEKYFGDLPGAAPP-PKI 232 (438)
T ss_pred CCCCCCC--CHHHHHhCC----------HHHHHHHHHHhcCcCceEEEEecCCC-HHHHHHHHHHHHccCCccCCC-CCC
Confidence 8765544 445555542 58999999999999999999999998 588999999999999872211 111
Q ss_pred ccccCCCCcEEEEc--C----CCceEEEeecccCCCCCC-cchHHHHHHHHhc---CccchHhhhhc-CCCCCcccc--c
Q 003700 601 WKAHLPSANEAIVI--P----TQVNYVGKAANIFETGYK-LNGSAYVISKHIS---NVWLWDRVRVS-GGAYGGFCD--F 667 (802)
Q Consensus 601 ~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~-d~~al~ll~~iLg---~s~L~~~iRek-g~aY~~~~~--~ 667 (802)
...+...+...+.+ + ..+.++..+++.++..++ +++++.|++.+|| +|+||+++||+ |+||++++. +
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~ 312 (438)
T COG0612 233 PPEPPLGPERVVRVNDPEQPDLEQAWLALGYPGPDYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDF 312 (438)
T ss_pred CCccccCCCceEEecCCCCchhhhhhhhccccCcCcCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeecccccc
Confidence 11122222223332 1 224466778888877766 7899999999999 58999999996 999999854 4
Q ss_pred cCCCceEEEEEEeC-CChHHHHHHHHhHHHHHhcC---CCCHHHHHHHHHHHHhhccc-CCChHHHHHHHHHHHHhCCCH
Q 003700 668 DSHSGVFSFLSYRD-PNLLKTLDIYDGTVDFLREL---EMDDDTLTKAIIGTIGDVDA-YQLPDAKGYSSLLRHLLGITE 742 (802)
Q Consensus 668 ~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~---~ite~eL~~ak~~l~~~~~~-~~~~~~~~~~~~~~~~~g~~~ 742 (802)
....|.+.++...+ ++...+.+.+.+++..+++. .+|+++++++|..+.+.+.. .+++...+.........|.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~k~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 392 (438)
T COG0612 313 LSDSGLFSIYAGTAPENPEKTAELVEEILKALKKGLKGPFTEEELDAAKQLLIGLLLLSLDSPSSIAELLGQYLLLGGSL 392 (438)
T ss_pred ccccCCceEEEEecCCChhhHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHhcCCc
Confidence 44567766665544 47788888888888877555 39999999999999999988 678777777666666778888
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEcChhhHH
Q 003700 743 EERQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVASPDDVD 786 (802)
Q Consensus 743 ~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg~~~~i~ 786 (802)
....++.+.|++||++||+++|++++.+ +...++++|+.+...
T Consensus 393 ~~~~~~~~~i~~vt~~dv~~~a~~~~~~-~~~~~~~~~p~~~~~ 435 (438)
T COG0612 393 ITLEELLERIEAVTLEDVNAVAKKLLAP-ENLTIVVLGPEKALK 435 (438)
T ss_pred cCHHHHHHHHHhcCHHHHHHHHHHhcCC-CCcEEEEEccccccc
Confidence 8999999999999999999999999986 446788888876543
No 9
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-35 Score=292.36 Aligned_cols=397 Identities=13% Similarity=0.068 Sum_probs=291.7
Q ss_pred cccCCceEEEeecCCCceEEEEEEeeCCCCCc--ccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccC
Q 003700 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ--ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSI 441 (802)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~~~~ 441 (802)
+++||++|..... .....++.+++++|+..+ +..+..+++.+|.+ +||++++...++.+++.+|+.+|++++
T Consensus 38 tL~NGlrVaTE~~-~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaF-KGT~~Rs~~alElEieniGahLNAytS---- 111 (467)
T KOG0960|consen 38 TLPNGLRVATEHN-SASTATVGVWIDAGSRFENEKNNGTAHFLEHLAF-KGTKNRSQAALELEIENIGAHLNAYTS---- 111 (467)
T ss_pred EcCCCcEEEeccC-CCcceEEEEEeccCccccccccccHHHHHHHHHh-cCCCcchhHHHHHHHHHHHHHhccccc----
Confidence 5789999977665 666899999999998644 33355566667666 899999999999999999999999998
Q ss_pred CCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCch--HHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhh
Q 003700 442 HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQ--QRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAG 519 (802)
Q Consensus 442 ~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~--~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 519 (802)
++.++|+++++++++++++++|+|++++..+.+. ++.+.++-++.++.+.+. ....+..+-+..+.+.
T Consensus 112 ------ReqT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~----~eVVfdhLHatafQgt 181 (467)
T KOG0960|consen 112 ------REQTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNH----QEVVFDHLHATAFQGT 181 (467)
T ss_pred ------ccceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHhcCC
Confidence 8999999999999999999999999999999853 355566656666665542 2344554444445555
Q ss_pred HHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCcccc
Q 003700 520 WISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERV 599 (802)
Q Consensus 520 ~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~~~ 599 (802)
|++..+- +..+.++.+. .+||++|.+..|.+.+|+++.+|.+++ +++.+++++|||.++....+...
T Consensus 182 PL~~til--Gp~enI~si~----------r~DL~~yi~thY~~~RmVlaaaGgV~H-e~lv~la~k~fg~~~~~~~~~~~ 248 (467)
T KOG0960|consen 182 PLGRTIL--GPSENIKSIS----------RADLKDYINTHYKASRMVLAAAGGVKH-EELVKLAEKYFGDLSKLQTGDKV 248 (467)
T ss_pred ccccccc--Chhhhhhhhh----------HHHHHHHHHhcccCccEEEEecCCcCH-HHHHHHHHHHcCCCcccccCcCC
Confidence 6654443 3344445442 579999999999999999999999984 78999999999998754332111
Q ss_pred c-cccc-CCCCcEEEEc-CCCceEEEeecccCCCCCCcchHHHHHHHHhc------------CccchHhhhhcCCCCCcc
Q 003700 600 K-WKAH-LPSANEAIVI-PTQVNYVGKAANIFETGYKLNGSAYVISKHIS------------NVWLWDRVRVSGGAYGGF 664 (802)
Q Consensus 600 ~-~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~al~ll~~iLg------------~s~L~~~iRekg~aY~~~ 664 (802)
+ .++. ..+....+.. +.|..|++++..++++.|||+.+++|+++|+| +|+|-+.+-+-.+|-+..
T Consensus 249 ~~~~~~~FtgsEvR~rdd~lP~a~~AiAVEG~~w~~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~~l~~sfq 328 (467)
T KOG0960|consen 249 PLVPPARFTGSEVRVRDDDLPLAHIAIAVEGVSWAHPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQDQLCHSFQ 328 (467)
T ss_pred CCCCCccccCceeeecCCCCchhheeeeEecCCcCCccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHHHHHHHHh
Confidence 1 1111 2222222222 46788999999999999999999999999999 356666665544543332
Q ss_pred c--cccCCCceEEEEEEeCCChHHHHHHHH---hHHHHHhcCCCCHHHHHHHHHHHHhhccc-CCChHHHHHHHHHH-HH
Q 003700 665 C--DFDSHSGVFSFLSYRDPNLLKTLDIYD---GTVDFLRELEMDDDTLTKAIIGTIGDVDA-YQLPDAKGYSSLLR-HL 737 (802)
Q Consensus 665 ~--~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~ite~eL~~ak~~l~~~~~~-~~~~~~~~~~~~~~-~~ 737 (802)
+ .-+.+.|+|++++.++ +.....+.+. +.+..|+. .+|+.|++|||+++..++.. .+.....+...... ..
T Consensus 329 sFnt~YkDTGLwG~y~V~~-~~~~iddl~~~vl~eW~rL~~-~vteaEV~RAKn~Lkt~Lll~ldgttpi~ediGrqlL~ 406 (467)
T KOG0960|consen 329 SFNTSYKDTGLWGIYFVTD-NLTMIDDLIHSVLKEWMRLAT-SVTEAEVERAKNQLKTNLLLSLDGTTPIAEDIGRQLLT 406 (467)
T ss_pred hhhcccccccceeEEEEec-ChhhHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHhh
Confidence 2 2334789999998774 4433333443 44444544 89999999999999999877 34333333322222 23
Q ss_pred h--CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEcChhhHHHhhhhhccc
Q 003700 738 L--GITEEERQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVASPDDVDAANKERANL 795 (802)
Q Consensus 738 ~--g~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg~~~~i~~~~~~~~~~ 795 (802)
+ .++.. +..++|++||.+||+++|.+|+..++ ..++.||+.+.+++++++|.+|
T Consensus 407 ~Grri~l~---El~~rId~vt~~~Vr~va~k~iyd~~-iAia~vG~ie~lpdy~~irs~m 462 (467)
T KOG0960|consen 407 YGRRIPLA---ELEARIDAVTAKDVREVASKYIYDKD-IAIAAVGPIEGLPDYNRIRSGM 462 (467)
T ss_pred cCCcCChH---HHHHHHhhccHHHHHHHHHHHhhcCC-cceeeecccccCchHHHHhccc
Confidence 3 44555 67789999999999999999999754 5677799999999999999998
No 10
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=7.9e-34 Score=314.69 Aligned_cols=183 Identities=26% Similarity=0.399 Sum_probs=171.4
Q ss_pred CcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHh
Q 003700 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (802)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~ 88 (802)
.++|++|+..|+.++.|+|||||||+|+||++++..++...+ +..|+..||+|++|+|+|++. +.+++++.++++++
T Consensus 42 ~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~--~~~G~~~na~ts~d~t~y~~~-~l~~~~~~~l~lla 118 (438)
T COG0612 42 DVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAF--EKLGGQLNAFTSFDYTVYYLS-VLPDNLDKALDLLA 118 (438)
T ss_pred EEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHH--HHhcCeeeccccchhhhhhhh-hchhhhHHHHHHHH
Confidence 457899999999999999999999999999999988755444 667999999999999999987 68899999999999
Q ss_pred hcccCCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCC
Q 003700 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKL 168 (802)
Q Consensus 89 d~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~~ 168 (802)
|++.+|.|++++ |++| |++|++|+++..++|.+++...+...+|++|||+++++|++++|+++
T Consensus 119 d~l~~p~f~~~~--~e~E---------------k~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~I~~i 181 (438)
T COG0612 119 DILLNPTFDEEE--VERE---------------KGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEAI 181 (438)
T ss_pred HHHhCCCCCHHH--HHHH---------------HHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHHHHhC
Confidence 999999999999 8765 99999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhccccccc
Q 003700 169 TFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE 212 (802)
Q Consensus 169 t~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~ 212 (802)
|.++|++||++||+|+||+|+++||||++++.++++ +.|+.++
T Consensus 182 t~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~-~~f~~~~ 224 (438)
T COG0612 182 TREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIE-KYFGDLP 224 (438)
T ss_pred CHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHH-HHHccCC
Confidence 999999999999999999999999999999999998 7777665
No 11
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=4.1e-33 Score=312.84 Aligned_cols=292 Identities=16% Similarity=0.166 Sum_probs=221.2
Q ss_pred cEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHhh
Q 003700 10 KVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFD 89 (802)
Q Consensus 10 ~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~d 89 (802)
.+|++||++|+.++.|+|||+|||+|+||++++..+-+.+.+ +.+|+.+||+|+.|+|+|++. ++.++++.+|+++.|
T Consensus 26 l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~l-e~lGG~lNA~Ts~d~T~y~~~-v~~~~l~~aL~lLaD 103 (696)
T TIGR02110 26 LRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWV-QRQGGQVNATTLERTTAFFFE-LPAAALAAGLARLCD 103 (696)
T ss_pred EEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHH-HHhCCeEEEEEcCCeEEEEEE-ecHHHHHHHHHHHHH
Confidence 469999999999999999999999999999999864355666 667999999999999999985 478999999999999
Q ss_pred cccCCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCCC
Q 003700 90 AVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLT 169 (802)
Q Consensus 90 ~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~~t 169 (802)
++.+|.|++++ |++| |++|++|++...++|..++.+.+.+.+|++|||+++++|+.++|++++
T Consensus 104 ~l~~P~f~eee--ierE---------------r~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~esL~~it 166 (696)
T TIGR02110 104 MLARPLLTAED--QQRE---------------REVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDSLALPN 166 (696)
T ss_pred HHhCCCCCHHH--HHHH---------------HHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHHHhCcc
Confidence 99999999999 8765 999999999989999999999999999999999999999999999876
Q ss_pred ---HHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhcccccccccccccCCCCcc---hh-HHH----HHhhhcccc
Q 003700 170 ---FEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFP---RG-LSL----MLRSMGKWI 238 (802)
Q Consensus 170 ---~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~-~~~----~~~~~~~~~ 238 (802)
.++|++||++||+|+||+|+|+||++++++.++++ +.|+.++...........| .+ ..+ .....-.|.
T Consensus 167 ~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e-~~f~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~q~~l~~~ 245 (696)
T TIGR02110 167 TAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAA-RFGASLAAGGECAQAPPAPLLRFDRLTLAGGSEPRLWLLFA 245 (696)
T ss_pred cchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHH-HHhCCCCCCCCCCCCCCCCCCCCceeEEEecCcceEEEEEe
Confidence 99999999999999999999999999999999997 7777654221100000000 00 000 000000111
Q ss_pred cCCCCccCcccchHHHHHHHHHhccCCcchHHHHHHHhhc-----------cC--CCeeEEEEecCc-chhhHHHHHHHH
Q 003700 239 YDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYIL-----------NN--PHCVTVEMQPDP-EKASRDEAAEKE 304 (802)
Q Consensus 239 ~~~~~~~~l~~~~~l~~l~~~l~~~~~~~~~~~l~~~~~~-----------~~--~~~~~~~~~p~~-~~~~~~~~~~~~ 304 (802)
..+.+. .....+..+...+.++.+++++..++++.+. .+ .|.+++.+.+.. ...+.+.+.+.+
T Consensus 246 ~p~~~~---~d~~al~lL~~iLg~g~sSrL~~~LRe~GLaysV~s~~~~~~~g~~lf~I~~~lt~~~~~~~~~v~~~i~~ 322 (696)
T TIGR02110 246 LAGLPA---TARDNVTLLCEFLQDEAPGGLLAQLRERGLAESVAATWLYQDAGQALLALEFSARCISAAAAQQIEQLLTQ 322 (696)
T ss_pred ecCCCC---CChHHHHHHHHHhCCCcchHHHHHHHHCCCEEEEEEeccccCCCCcEEEEEEEEcCCCccCHHHHHHHHHH
Confidence 111111 1122466777778776677888888876432 11 344555554432 233455667777
Q ss_pred HHHHH-Hh--cCCHHHHHHHHHH
Q 003700 305 ILAKV-KS--SMTKEDLAELARA 324 (802)
Q Consensus 305 ~l~~~-~~--~~t~~el~~~~~~ 324 (802)
+++.+ +. +++.+|+.++|..
T Consensus 323 ~L~~L~~~~~~~~~eel~rlk~~ 345 (696)
T TIGR02110 323 WLGALAEQTWAEQLEHYAQLAQR 345 (696)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHh
Confidence 77776 66 7899999999984
No 12
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-32 Score=265.83 Aligned_cols=183 Identities=19% Similarity=0.269 Sum_probs=170.2
Q ss_pred CcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHh
Q 003700 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (802)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~ 88 (802)
-++|.+||++|.+.+.|.|||||||+|+||++.+...+-.+. +.+|+++||+|++|+|.|+. .+.++++++++++++
T Consensus 58 GVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEi--eniGahLNAytSReqT~yya-kal~~dv~kavdiLa 134 (467)
T KOG0960|consen 58 GVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEI--ENIGAHLNAYTSREQTVYYA-KALSKDVPKAVDILA 134 (467)
T ss_pred EEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHH--HHHHHHhcccccccceeeeh-hhccccchHHHHHHH
Confidence 457999999999999999999999999999999887754455 78899999999999999996 457899999999999
Q ss_pred hcccCCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCC
Q 003700 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKL 168 (802)
Q Consensus 89 d~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~~ 168 (802)
|++.+..+.+.+ +++| |++|+.||+....+-....++.++.+.|.++|++++..|+.+.|+++
T Consensus 135 DIlqns~L~~s~--IerE---------------R~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~enI~si 197 (467)
T KOG0960|consen 135 DILQNSKLEESA--IERE---------------RDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSENIKSI 197 (467)
T ss_pred HHHHhCccchhH--HHHH---------------HHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhhhhhhh
Confidence 999999999998 8664 99999999998888889999999999999999999999999999999
Q ss_pred CHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhccccccc
Q 003700 169 TFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE 212 (802)
Q Consensus 169 t~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~ 212 (802)
+.+||++|-++||.+++|+|+.+|.++++++.++++ ++|+.++
T Consensus 198 ~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~-k~fg~~~ 240 (467)
T KOG0960|consen 198 SRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAE-KYFGDLS 240 (467)
T ss_pred hHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHH-HHcCCCc
Confidence 999999999999999999999999999999999997 8888754
No 13
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=99.98 E-value=2.2e-30 Score=290.87 Aligned_cols=329 Identities=10% Similarity=0.016 Sum_probs=242.8
Q ss_pred cccCCceEEEeecCCCceEEEEEEeeCCCCCc-ccccCh-HHHHHhhhhcCCCCCCHH-HHHHHHhhcccceEEeeeecc
Q 003700 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLI-PLFCQSLKEMGTKDLSFV-QLDQLIGRKTGGISVYPFTSS 440 (802)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~-~l~~~~l~~~Gt~~~s~~-el~~~l~~~~~~~~~~~~~~~ 440 (802)
++.||++|++.+++..+++.+.+++++|+..+ ....++ +++++||+ +||++++.. +|.+.++.+||.+|++|+
T Consensus 4 tL~NGLrVllv~~p~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLF-kGT~~~~~~~~i~~~le~lGG~lNA~Ts--- 79 (696)
T TIGR02110 4 TLPNGLRVHLYHQPDAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLF-LGGERFQGDDRLMPWVQRQGGQVNATTL--- 79 (696)
T ss_pred EcCCCCEEEEEECCCCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHh-cCCCCCCcHHHHHHHHHHhCCeEEEEEc---
Confidence 57899999999999999999999999998643 344555 45556665 899999985 899999999999999998
Q ss_pred CCCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhhH
Q 003700 441 IHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGW 520 (802)
Q Consensus 441 ~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 520 (802)
.+.+.|++++++++++.+|++++|++.+|.|++ +.++..+.....+++.... ++...+...+...++++|+
T Consensus 80 -------~d~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~e-eeierEr~vvl~Ei~~~~d-dp~~~~~~~l~~~l~~~HP 150 (696)
T TIGR02110 80 -------ERTTAFFFELPAAALAAGLARLCDMLARPLLTA-EDQQREREVLEAEYIAWQN-DADTLREAALLDALQAGHP 150 (696)
T ss_pred -------CCeEEEEEEecHHHHHHHHHHHHHHHhCCCCCH-HHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHcCCCCC
Confidence 789999999999999999999999999999995 5555555555555554433 4556677777777777777
Q ss_pred HHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCccccc
Q 003700 521 ISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVK 600 (802)
Q Consensus 521 ~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 600 (802)
|... .+++.+.+..+.. .+.++|++||+++|.|+|++|+|+||++ .+++++.++++|+.|+.+.......
T Consensus 151 y~~~--~iGt~esL~~it~-------~t~edL~~F~~~~Y~p~NmvLvIvGdvs-~eel~~l~e~~f~~~~~~~~~~~~~ 220 (696)
T TIGR02110 151 LRRF--HAGSRDSLALPNT-------AFQQALRDFHRRHYQAGNMQLWLQGPQS-LDELEQLAARFGASLAAGGECAQAP 220 (696)
T ss_pred CCCC--CCCCHHHHhCccc-------chHHHHHHHHHHhcchhcEEEEEEeCCC-HHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 7643 3444445543311 2368999999999999999999999998 6889999999999997654321111
Q ss_pred ccccCCCCcEEEEc-CCCceEEEeecccCCCCCCcchHHHHHHHHhc---CccchHhhhhcCCCCCccccccC-CCc--e
Q 003700 601 WKAHLPSANEAIVI-PTQVNYVGKAANIFETGYKLNGSAYVISKHIS---NVWLWDRVRVSGGAYGGFCDFDS-HSG--V 673 (802)
Q Consensus 601 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~al~ll~~iLg---~s~L~~~iRekg~aY~~~~~~~~-~~g--~ 673 (802)
..+........+.. ..++.+++++++.++..++ .++.+++.||| +|+|+.+||++|++|++++++.. ..| .
T Consensus 221 ~~p~~~~~~~~~~~~~~~q~~l~~~~p~~~~~d~--~al~lL~~iLg~g~sSrL~~~LRe~GLaysV~s~~~~~~~g~~l 298 (696)
T TIGR02110 221 PAPLLRFDRLTLAGGSEPRLWLLFALAGLPATAR--DNVTLLCEFLQDEAPGGLLAQLRERGLAESVAATWLYQDAGQAL 298 (696)
T ss_pred CCCCCCCceeEEEecCcceEEEEEeecCCCCCCh--HHHHHHHHHhCCCcchHHHHHHHHCCCEEEEEEeccccCCCCcE
Confidence 11111111122222 3344555666666555544 46899999999 68999999999999999986532 344 5
Q ss_pred EEEEEEeC---C-ChHHHHHHHHhHHHHHhcC--CCCHHHHHHHHHHHHh
Q 003700 674 FSFLSYRD---P-NLLKTLDIYDGTVDFLREL--EMDDDTLTKAIIGTIG 717 (802)
Q Consensus 674 ~~~~~~~~---~-~~~~~~~~~~~~~~~l~~~--~ite~eL~~ak~~l~~ 717 (802)
|.+++... + +..++.+.+.+.++.+++. +++.+|++++|..-+.
T Consensus 299 f~I~~~lt~~~~~~~~~v~~~i~~~L~~L~~~~~~~~~eel~rlk~~~~~ 348 (696)
T TIGR02110 299 LALEFSARCISAAAAQQIEQLLTQWLGALAEQTWAEQLEHYAQLAQRRFQ 348 (696)
T ss_pred EEEEEEEcCCCccCHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhh
Confidence 55555441 1 5677777888888888777 8999999999987443
No 14
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=99.97 E-value=2.2e-30 Score=261.13 Aligned_cols=247 Identities=34% Similarity=0.570 Sum_probs=210.0
Q ss_pred EecCcchhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCCCCccccccCCCCCCCCCCCCCCCCCCcccccC
Q 003700 288 MQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDIN 367 (802)
Q Consensus 288 ~~p~~~~~~~~~~~~~~~l~~~~~~~t~~el~~~~~~~~~~~~~~~~~~~~~~l~~lp~~t~~dl~~~~~~~p~~~~~~n 367 (802)
+.|++++.+...+++++.++.++..+|+++++++.++.+.+.+||++++ .++.+|.++++||++..+.+|......+
T Consensus 1 m~P~~~~~~~~~~~e~~~L~~~k~~Ls~~e~~~i~~~~~~L~~~Q~~~d---~~~~LP~L~~~Di~~~~~~~~~~~~~~~ 77 (248)
T PF08367_consen 1 MKPDPGLSEKQEEEEKEKLAAYKASLSEEEKEKIIEQTKELKERQEAED---DLATLPTLSLSDIPREIEKIPLEVEKLG 77 (248)
T ss_dssp EEEETTHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHHHHHHHHHCS-----HHTTS----GGGS-SS------EECCCT
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCChh---hHHHHccccHHhcCCCCCCCCceeeecC
Confidence 5789999999999999999999999999999999999999999999766 8889999999999999999998888889
Q ss_pred CceEEEeecCCCceEEEEEEeeCCCCCcccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeeecc-CCCCCC
Q 003700 368 GVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSS-IHGKED 446 (802)
Q Consensus 368 G~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~~~-~~~~~~ 446 (802)
|++|++++.++||++|++++|+.+.++.++.+++++|+.+|...||+++++.|++..+..++||+++++...+ ..+.+.
T Consensus 78 ~~~v~~~~~~TnGI~Y~~l~fdl~~l~~e~l~yl~Ll~~ll~~lgT~~~sy~el~~~i~~~tGGis~~~~~~~~~~~~~~ 157 (248)
T PF08367_consen 78 GIPVLFHEQPTNGIVYVRLYFDLSDLPEEDLPYLPLLTDLLGELGTKNYSYEELSNEIDLYTGGISFSIEVYTDYDDDDK 157 (248)
T ss_dssp TCEEEEEE---TTEEEEEEEEE-TTS-CCCHCCHHHHHHHCCCS-BSSS-HHHHHHHHHHHSSEEEEEEEEEEEECTECC
T ss_pred CccEEEEEcCCCCeEEEEEEecCCCCCHHHHHhHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCeEEEeeeccCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998754 445677
Q ss_pred CceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhhHHHHHhc
Q 003700 447 PCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMG 526 (802)
Q Consensus 447 ~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 526 (802)
+..++.++++|+.++++++++|+.+++.+|.|++.++++.++.+.+.++++.+.++||.+|..++.+.+++.+.+.+.++
T Consensus 158 ~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~rl~~ll~~~~s~~~~~i~~~Gh~~A~~ra~s~~s~~~~~~e~~~ 237 (248)
T PF08367_consen 158 YRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKERLKELLKELKSDMESSIISSGHSYAMSRASSYLSRSGALDELWS 237 (248)
T ss_dssp CEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCTT-HHHHHHHHHH
T ss_pred eeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcCCHHHHHHHHHc
Confidence 88999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHH
Q 003700 527 GVSYLEFLQAL 537 (802)
Q Consensus 527 g~~~~~~l~~l 537 (802)
|++++.|+++|
T Consensus 238 Gl~~~~fl~~L 248 (248)
T PF08367_consen 238 GLSQYKFLKDL 248 (248)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHhC
Confidence 99999998864
No 15
>PRK15101 protease3; Provisional
Probab=99.97 E-value=2.1e-29 Score=306.88 Aligned_cols=395 Identities=13% Similarity=0.014 Sum_probs=284.3
Q ss_pred ccccCCceEEEeecCCCceEEEEEEeeCCCCCc-ccccCh-HHHHHhhhhcCCCCCC-HHHHHHHHhhcccceEEeeeec
Q 003700 363 VGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLI-PLFCQSLKEMGTKDLS-FVQLDQLIGRKTGGISVYPFTS 439 (802)
Q Consensus 363 ~~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~-~l~~~~l~~~Gt~~~s-~~el~~~l~~~~~~~~~~~~~~ 439 (802)
.++.||++|++.+++..+.+.+.+.+++|+..+ .+.+++ ++++|||+ .||++++ ..++++.++.+||.+|++|+
T Consensus 47 ~~L~NGL~v~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf-~GT~~~p~~~~~~~~l~~~Gg~~NA~T~-- 123 (961)
T PRK15101 47 IRLDNGMTVLLVSDPQAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVL-MGSKKYPQPDSLAEFLKKHGGSHNASTA-- 123 (961)
T ss_pred EEeCCCCEEEEEeCCCCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHh-cCCccCCCcchHHHHHHHhCCCccceEC--
Confidence 468999999999999889999999999998643 344454 55556665 8999996 68999999999999999998
Q ss_pred cCCCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhh
Q 003700 440 SIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAG 519 (802)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 519 (802)
.+.+.|++++++++++.+|+++++++.+|.|++ +.+.+.+....++++.... ++...+........+++|
T Consensus 124 --------~d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f~~-~~~erE~~~v~~E~~~~~~-~~~~~~~~~~~~~~~~~h 193 (961)
T PRK15101 124 --------SYRTAFYLEVENDALPPAVDRLADAIAEPLLDP-KNADRERNAVNAELTMARS-RDGMRMAQVSAETINPAH 193 (961)
T ss_pred --------CCceEEEEEcCHHHHHHHHHHHHHHHhccCCCH-HHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHhhCCCCC
Confidence 688999999999999999999999999999995 5444444444455444333 344555666666777888
Q ss_pred HHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCcccc
Q 003700 520 WISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERV 599 (802)
Q Consensus 520 ~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~~~ 599 (802)
+++... ++..+.+.++.. ..+.++|++||+++|.|+||+++|+||++ .+++...++++|+.|+....+.+.
T Consensus 194 p~~~~~--~G~~etl~~~~~------~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~-~~~l~~~~~~~F~~~~~~~~~~~~ 264 (961)
T PRK15101 194 PGSRFS--GGNLETLSDKPG------SKLQDALVDFYQRYYSANLMKAVIYSNQP-LPELAKLAADTFGRVPNKNASVPE 264 (961)
T ss_pred CcccCC--CCCHHHhhcCCc------hHHHHHHHHHHHHhCcccceEEEEEcCCC-HHHHHHHHHHHhccCCCCCCCCCC
Confidence 876543 344455544311 12468999999999999999999999998 688999999999999865432111
Q ss_pred -cccccCC-CCcEEEE-cC-CCceEEEeecccCCCCCC-cchHHHHHHHHhc---CccchHhhhhcCCCCCccccccC--
Q 003700 600 -KWKAHLP-SANEAIV-IP-TQVNYVGKAANIFETGYK-LNGSAYVISKHIS---NVWLWDRVRVSGGAYGGFCDFDS-- 669 (802)
Q Consensus 600 -~~~~~~~-~~~~~~~-~~-~~~~~~~~~~~~~~~~~~-d~~al~ll~~iLg---~s~L~~~iRekg~aY~~~~~~~~-- 669 (802)
..++..+ .....+. .+ .+...+.++|+.|+..+. +..+..+++.+|| .++|+..++.+|++|+++++...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~g~l~~~L~~~gla~~v~s~~~~~~ 344 (961)
T PRK15101 265 ITVPVVTDAQKGIIIHYVPAQPRKVLRVEFRIDNNSAKFRSKTDEYISYLIGNRSPGTLSDWLQKQGLAEGISAGADPMV 344 (961)
T ss_pred CCCCCCCHHHcCeEEEEEECCCCcEEEEEEecCCcHHHHhhCHHHHHHHHhcCCCCCcHHHHHHHcCccceeeecccccc
Confidence 1111111 1111222 23 344556677776654322 2346788999998 45788888878999999987653
Q ss_pred --CCceEEEEEEeCC----ChHHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhcccC--CChHHHHHHHHHHHHhCCC
Q 003700 670 --HSGVFSFLSYRDP----NLLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAY--QLPDAKGYSSLLRHLLGIT 741 (802)
Q Consensus 670 --~~g~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~~--~~~~~~~~~~~~~~~~g~~ 741 (802)
..|.|.+.+...+ +..++++.+.+.++.+++.+++++|++++|..+..++... ..+.+.+. .+...+.+.+
T Consensus 345 ~~~~g~f~i~~~~~~~~~~~~~~v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 423 (961)
T PRK15101 345 DRNSGVFAISVSLTDKGLAQRDQVVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIE-WLADTMLRVP 423 (961)
T ss_pred CCCceEEEEEEEcChHHHHhHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHH-HHHHHhhhCC
Confidence 2466666555444 3456677777777788889999999999999999887552 23333332 2223356777
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEcCh
Q 003700 742 EEERQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVASP 782 (802)
Q Consensus 742 ~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg~~ 782 (802)
++........+..+++++|+++++. |.+ +...++++++.
T Consensus 424 ~~~~l~~~~~~~~~~~~~i~~~~~~-l~~-~n~~i~~~~~~ 462 (961)
T PRK15101 424 VEHTLDAPYIADRYDPKAIKARLAE-MTP-QNARIWYISPQ 462 (961)
T ss_pred HHHheeCchhhhcCCHHHHHHHHhh-cCH-hHEEEEEEeCC
Confidence 8877778889999999999999887 666 45667767664
No 16
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=3.6e-28 Score=240.46 Aligned_cols=398 Identities=12% Similarity=0.054 Sum_probs=274.1
Q ss_pred cccCCceEEEeecCCCceEEEEEEeeCCCCCc-ccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCC
Q 003700 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH 442 (802)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~~~~~ 442 (802)
++.||++|...+++ .+++.+.++++.|+.-+ ....+.++|..-|....|.+.+..++...||.+||..+++++
T Consensus 29 tL~NGlkvase~~p-g~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cqsS----- 102 (472)
T KOG2067|consen 29 TLPNGLKVASENTP-GQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQSS----- 102 (472)
T ss_pred ecCCccEEeccCCC-CCceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCccccccc-----
Confidence 68999999766654 55999999999998654 333455555544555899999999999999999999999998
Q ss_pred CCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhhHHH
Q 003700 443 GKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWIS 522 (802)
Q Consensus 443 ~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 522 (802)
++.+.|.+++.++.++.++++|+|.+.+|.|.| +.+...+...+-++++-... |..+.....-+..+.+..+.
T Consensus 103 -----Retm~Yaas~~~~~v~sm~~lLadtV~~P~~~d-~ev~~~~~~v~~E~~el~~~-Pe~lL~e~iH~Aay~~ntlg 175 (472)
T KOG2067|consen 103 -----RETMMYAASADSDGVDSMVELLADTVLNPKFTD-QEVEEARRAVKYEIEELWMR-PEPLLTEMIHSAAYSGNTLG 175 (472)
T ss_pred -----HhhhHHHHHhhhcccHHHHHHHHHHHhcccccH-HHHHHHHHhhhheccccccC-chhhHHHHHHHHHhccCccc
Confidence 899999999999999999999999999999996 43443333333333333222 23232222221111111111
Q ss_pred HHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCccccccc
Q 003700 523 EQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWK 602 (802)
Q Consensus 523 ~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 602 (802)
.+. +...+.+..+ ..+.|..|.+.+|.|.+|+++.+| ++ .+.+++.++++++.||....++.....
T Consensus 176 ~pl--~cp~~~i~~I----------~~~~l~~yl~~~ytp~rmVlA~vG-V~-heelv~~~~~~~~~~~s~~~p~i~~~~ 241 (472)
T KOG2067|consen 176 LPL--LCPEENIDKI----------NREVLEEYLKYFYTPERMVLAGVG-VE-HEELVEIAEKLLGDLPSTKVPPIDESK 241 (472)
T ss_pred ccc--cCChhhhhhh----------hHHHHHHHHHhcCChhheEeeecC-CC-HHHHHHHHHHHhccCCccCCCCcccch
Confidence 001 1111222222 247799999999999999999999 55 478999999999999985443221111
Q ss_pred ccCCCCcEEEEcC-------CCceEEEeecccCCCCCCcchHHHHHHHHhc--------------CccchHhhhhc-CCC
Q 003700 603 AHLPSANEAIVIP-------TQVNYVGKAANIFETGYKLNGSAYVISKHIS--------------NVWLWDRVRVS-GGA 660 (802)
Q Consensus 603 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~al~ll~~iLg--------------~s~L~~~iRek-g~a 660 (802)
....++...+..+ ...+|+++|+.++++.++|.+++.||+.++| .||||.++-.+ .+.
T Consensus 242 aQYtGG~~~~~~d~~~~~~g~EltHv~lg~Eg~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv 321 (472)
T KOG2067|consen 242 AQYTGGELKIDTDAPQVTGGPELTHVVLGFEGCSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWV 321 (472)
T ss_pred hhccccccccCCCCccccCccceeeeeEeeccCCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHH
Confidence 1112221111111 1356889999999999999999999999998 25888888776 799
Q ss_pred CCccccccC--CCceEEEEEEeCCC-hHHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhcccCCChHHHHHHHHHHH-
Q 003700 661 YGGFCDFDS--HSGVFSFLSYRDPN-LLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPDAKGYSSLLRH- 736 (802)
Q Consensus 661 Y~~~~~~~~--~~g~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~~~~~~~~~~~~~~~~- 736 (802)
|++-++... +.|+|+++...+|+ ...+.+++-+.+-.+ .++++++||+|||+++.+.+.+...+.-.+...+.++
T Consensus 322 ~sctAfnhsy~DtGlfgi~~s~~P~~a~~aveli~~e~~~~-~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQV 400 (472)
T KOG2067|consen 322 YSCTAFNHSYSDTGLFGIYASAPPQAANDAVELIAKEMINM-AGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQV 400 (472)
T ss_pred HHhhhhhccccCCceeEEeccCCHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHH
Confidence 999887543 57877776656663 334444444333333 4569999999999999999988544433444444332
Q ss_pred ---HhCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEcChhhHHHhhhhhcc
Q 003700 737 ---LLGITEEERQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVASPDDVDAANKERAN 794 (802)
Q Consensus 737 ---~~g~~~~~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg~~~~i~~~~~~~~~ 794 (802)
....+++ ++++.|+++|++||.++|+++|.. +..+...|+-..++++..+...
T Consensus 401 L~~g~rk~p~---e~~~~Ie~lt~~DI~rva~kvlt~--~p~va~~Gd~~~lpt~~~i~~~ 456 (472)
T KOG2067|consen 401 LTTGERKPPD---EFIKKIEQLTPSDISRVASKVLTG--KPSVAAFGDGTGLPTYDHIGNA 456 (472)
T ss_pred HhccCcCCHH---HHHHHHHhcCHHHHHHHHHHHhcC--CceeccCCcccCCcchhhhhhh
Confidence 2234455 899999999999999999999974 4567767887777776665443
No 17
>PTZ00432 falcilysin; Provisional
Probab=99.93 E-value=8.6e-24 Score=253.81 Aligned_cols=373 Identities=10% Similarity=0.028 Sum_probs=253.8
Q ss_pred ccCCceEEEeecCC--CceEEEEEEeeCCCCCcccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcc--cceEEeeeecc
Q 003700 365 DINGVKVLQHDLFT--NDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKT--GGISVYPFTSS 440 (802)
Q Consensus 365 ~~nG~~v~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~--~~~~~~~~~~~ 440 (802)
..||++|++...+. .+.+.+.++|+++. .+..+..++++|+++ .||++++..++...++..| +.+|++|+
T Consensus 97 ~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~--~d~~G~aH~LEH~~f-~GS~k~p~~~~~~~l~~~gl~~~lNA~T~--- 170 (1119)
T PTZ00432 97 KKTGLQVISLKTNDSSGKEMCFDFYVPTPP--HNDKGIPHILEHSVL-SGSKKYNYKDSFSLLVQGGFNSFLNAYTF--- 170 (1119)
T ss_pred cCCCCEEEEEecCCCccceeEEEEEecCCC--CCCcchhHHHHHHHh-CCCCCCCcccHHHHHHhcCcCCCccccCC---
Confidence 56999998776443 34688889998884 345566677777776 8999999999999998865 67899998
Q ss_pred CCCCCCCceeEEEEEEeccc-cHHHHHHHHHHHHhcCCCCchHH-H--------------------------------HH
Q 003700 441 IHGKEDPCCCMVVRGKAMAG-QAEDLFNLFNCVLQEVQLTDQQR-F--------------------------------KQ 486 (802)
Q Consensus 441 ~~~~~~~~~~~~~~~~~l~~-~l~~~l~ll~~~l~~p~f~~~~~-~--------------------------------~~ 486 (802)
.+.++|.+.++.+ ++..+++++.|++.+|.|++.+. | +.
T Consensus 171 -------~D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kg 243 (1119)
T PTZ00432 171 -------KDRTSYLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSG 243 (1119)
T ss_pred -------CCceEEEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhh
Confidence 7899999999985 79999999999999999985321 1 22
Q ss_pred -HHHHHHHHhhhhhccCcHHHHHHHHHhccChhhHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCc
Q 003700 487 -FVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGC 565 (802)
Q Consensus 487 -i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~ 565 (802)
+.++++... +++...+...+.+.++ .++|+...+|. .+.+..+ +.++|++||+++|+|+|+
T Consensus 244 VV~~Emk~~~-----~~p~~~~~~~~~~~lf-~~pY~~~~~G~--~~~I~~l----------t~e~l~~Fh~~~Y~P~N~ 305 (1119)
T PTZ00432 244 IVYSEMKKRF-----SDPLSFGYSVIYQNLF-SNVYKYDSGGD--PKDIVEL----------TYEELVEFYKTYYGPKTA 305 (1119)
T ss_pred HHHHHHHHhh-----CCHHHHHHHHHHHHHh-CCCCCCCCCCC--hHhhccC----------CHHHHHHHHHHhcCccce
Confidence 223333322 2456677777666666 77776555444 3334433 358999999999999999
Q ss_pred EEEEEeCccchhhHHHHHHHHHhcCCCCCCcc----c--cccccc---CCCCcEEEEc-----CCCceEEEe-ecccCC-
Q 003700 566 LINMTADGKNLKNSERFVGKFLDMLPTNSPVE----R--VKWKAH---LPSANEAIVI-----PTQVNYVGK-AANIFE- 629 (802)
Q Consensus 566 ~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~----~--~~~~~~---~~~~~~~~~~-----~~~~~~~~~-~~~~~~- 629 (802)
+++|+||++ .+++.+.++++|+.+|...... + ...+.+ ...+...+.. +.+...+.+ +|+.++
T Consensus 306 ~l~v~Gdid-~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~ 384 (1119)
T PTZ00432 306 TVYFYGPND-VTERLEFVDNYLTKHPKTGQLSHTAYREDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPK 384 (1119)
T ss_pred EEEEEcCCC-HHHHHHHHHHHHhhcccccccccccccccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCc
Confidence 999999998 6889999999998887542100 0 000000 0011222221 122334444 476532
Q ss_pred ----------CCC-CcchHHHHHHHHhc---CccchHhhhhcCCCCCc-cccccCC--CceEEEEEEeCC---------C
Q 003700 630 ----------TGY-KLNGSAYVISKHIS---NVWLWDRVRVSGGAYGG-FCDFDSH--SGVFSFLSYRDP---------N 683 (802)
Q Consensus 630 ----------~~~-~d~~al~ll~~iLg---~s~L~~~iRekg~aY~~-~~~~~~~--~g~~~~~~~~~~---------~ 683 (802)
..+ +++.++.||+.+|| +|+|++.||++|++|++ ++++... .+.|.+.+...+ +
T Consensus 385 ~~~~~~~~~~~~d~~~~~AL~VLs~lLggg~sS~L~q~LrE~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~ 464 (1119)
T PTZ00432 385 HNGSKDYDKSLIDPVDYLALLVLNYLLLGTPESVLYKALIDSGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKV 464 (1119)
T ss_pred cccccccccccCCHHHHHHHHHHHHHHcCCCccHHHHHHHhcCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhhh
Confidence 133 57899999999998 78999999999999995 4444433 455555543222 1
Q ss_pred hHHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhcccCC-C--h--HHHHHHHHHHHHhCCCHHH-------HHHHHHH
Q 003700 684 LLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQ-L--P--DAKGYSSLLRHLLGITEEE-------RQRRREE 751 (802)
Q Consensus 684 ~~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~~~-~--~--~~~~~~~~~~~~~g~~~~~-------~~~~~~~ 751 (802)
..+..+.+.++++.+++.+|++++|++|++++..++.... . | ...+......+.+|.++.. .++.+++
T Consensus 465 ~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef~~rE~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~ 544 (1119)
T PTZ00432 465 HYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEFVMKELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLR 544 (1119)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHH
Confidence 3467778888888888999999999999999988876522 1 2 3334444445667666544 2333333
Q ss_pred HhcCCHHHHHHHHHHHHHh
Q 003700 752 ILSTSLKDFKEFADVLEAI 770 (802)
Q Consensus 752 i~~vT~edi~~~a~~~l~~ 770 (802)
+ .-+..-+.+++++||-.
T Consensus 545 ~-~~~~~y~e~Li~k~ll~ 562 (1119)
T PTZ00432 545 I-DNESKYLEKLIEKHLLN 562 (1119)
T ss_pred H-hcccHHHHHHHHHHccC
Confidence 3 22345699999999864
No 18
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=4.4e-24 Score=211.65 Aligned_cols=181 Identities=19% Similarity=0.296 Sum_probs=167.5
Q ss_pred cEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHhh
Q 003700 10 KVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFD 89 (802)
Q Consensus 10 ~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~d 89 (802)
+.++.||++|...-.|++||||.|+|+.|.+++..+++.++ +..|+...+.|++|.+.|.+ ++..++++.++.+++|
T Consensus 50 lyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~L--E~~GGn~~cqsSRetm~Yaa-s~~~~~v~sm~~lLad 126 (472)
T KOG2067|consen 50 LYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAEL--EKLGGNCDCQSSRETMMYAA-SADSDGVDSMVELLAD 126 (472)
T ss_pred EEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHH--HHhCCcccccccHhhhHHHH-HhhhcccHHHHHHHHH
Confidence 46899999999999999999999999999999999887676 78899999999999999996 4578999999999999
Q ss_pred cccCCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCCC
Q 003700 90 AVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLT 169 (802)
Q Consensus 90 ~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~~t 169 (802)
.+.+|.|++++ +..+ |..|.-|+..-...|...+.+.++.++|.+.+.+.+..+..+.|..|+
T Consensus 127 tV~~P~~~d~e--v~~~---------------~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~cp~~~i~~I~ 189 (472)
T KOG2067|consen 127 TVLNPKFTDQE--VEEA---------------RRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLCPEENIDKIN 189 (472)
T ss_pred HHhcccccHHH--HHHH---------------HHhhhheccccccCchhhHHHHHHHHHhccCcccccccCChhhhhhhh
Confidence 99999999999 7664 888889998888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhccccccc
Q 003700 170 FEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE 212 (802)
Q Consensus 170 ~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~ 212 (802)
.+.|..|-+.+|+|++|++..+| ++++++++.++ +.+...+
T Consensus 190 ~~~l~~yl~~~ytp~rmVlA~vG-V~heelv~~~~-~~~~~~~ 230 (472)
T KOG2067|consen 190 REVLEEYLKYFYTPERMVLAGVG-VEHEELVEIAE-KLLGDLP 230 (472)
T ss_pred HHHHHHHHHhcCChhheEeeecC-CCHHHHHHHHH-HHhccCC
Confidence 99999999999999999999999 99999999997 6666544
No 19
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.78 E-value=9.9e-20 Score=170.07 Aligned_cols=133 Identities=29% Similarity=0.438 Sum_probs=120.0
Q ss_pred CcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHh
Q 003700 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (802)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~ 88 (802)
..+|++|++.|+.++.|++|+++||+|+||++++..+ +.+.+ ..+|+.+|+.|+.|+|.|.+.. +.++++.+|+++.
T Consensus 16 ~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~-l~~~l-~~~G~~~~~~t~~d~t~~~~~~-~~~~~~~~l~~l~ 92 (149)
T PF00675_consen 16 SLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDE-LQEEL-ESLGASFNASTSRDSTSYSASV-LSEDLEKALELLA 92 (149)
T ss_dssp EEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHH-HHHHH-HHTTCEEEEEEESSEEEEEEEE-EGGGHHHHHHHHH
T ss_pred EEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhh-hHHHh-hhhccccceEecccceEEEEEE-ecccchhHHHHHH
Confidence 4578999999999999999999999999999999865 44555 6679999999999999999854 7789999999999
Q ss_pred hcccCCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCC
Q 003700 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGD 161 (802)
Q Consensus 89 d~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~ 161 (802)
+++.+|.|++++ |+++ |..+..|++...++|..++.+.+++.+|.+|||+++..|+
T Consensus 93 ~~~~~P~f~~~~--~~~~---------------r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 93 DMLFNPSFDEEE--FERE---------------REQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp HHHHSBGGCHHH--HHHH---------------HHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred HHHhCCCCCHHH--HHHH---------------HHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 999999999999 8775 9999999999999999999999999999999999998886
No 20
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=2.1e-16 Score=176.42 Aligned_cols=395 Identities=12% Similarity=0.045 Sum_probs=262.4
Q ss_pred cccCCceEEEeecCCCceEEEEEEeeCCCC-CcccccChHHHHHhhhhcCCCCCC-HHHHHHHHhhcccceEEeeeeccC
Q 003700 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSL-KQELLPLIPLFCQSLKEMGTKDLS-FVQLDQLIGRKTGGISVYPFTSSI 441 (802)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~Gt~~~s-~~el~~~l~~~~~~~~~~~~~~~~ 441 (802)
.++||+++++..+|...-....+.+.+|+. ++++.+++++|+++|...|+++++ ...+...|..+||+.|++|.
T Consensus 28 ~LpNGl~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~NA~T~---- 103 (937)
T COG1025 28 KLPNGLRALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNASTA---- 103 (937)
T ss_pred ECCCCceEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCccccccC----
Confidence 578999999999988878888888888886 456777777776544449999984 57799999999999999997
Q ss_pred CCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhhHH
Q 003700 442 HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWI 521 (802)
Q Consensus 442 ~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 521 (802)
.+.++|++.+..+.++.+|+-+++++.+|-|+. +...+.+...-+++.....+.+..+. +..+....++|++
T Consensus 104 ------~~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~-e~~dRE~~AV~sE~~~~~~~D~~R~~-~~~~~~~np~HP~ 175 (937)
T COG1025 104 ------GERTAFYFEVENDALEGALDRFADFFIEPLFNK-EALDRERNAVNSEFTMNLTSDGWRMY-QVQALTANPGHPL 175 (937)
T ss_pred ------CCceeEEEEecHHHHHHHHHHHHHHHhccccCh-HHHHHHHHHHHHHHhcCcCchHHHHH-HHHHhhcCCCCCc
Confidence 678999999999999999999999999999994 54555555555556666655554333 3344566777777
Q ss_pred HHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCcccccc
Q 003700 522 SEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKW 601 (802)
Q Consensus 522 ~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 601 (802)
.+ .+.+.++++.+... ..+.+.|++||+++|++++|.++|.|+-. .+++.+++.++||.+|......+...
T Consensus 176 sr--Fs~GN~~TL~~~p~------~~v~~el~ef~~~~YSa~~M~lviyg~q~-ldeL~~~a~~~F~~Ipn~~~~~p~~p 246 (937)
T COG1025 176 SK--FSTGNLETLSDKPG------LVVQQELKEFHEKHYSANNMKLVIYGNQP-LDELAKLAADLFGDIPNRARKIPPIP 246 (937)
T ss_pred cc--cCCCChhhhccCCC------chHHHHHHHHHHHhcChhheEEEEecCCC-HHHHHHHHHHHhCcCCCCCCCCCCCC
Confidence 54 33444555554210 13568999999999999999999999987 89999999999999986543211111
Q ss_pred cccC---CCCcEEEEcCC-CceEEEeecccCCCCCCc-chHHHHHHHHhc---CccchHhhhhcCCCCCccccccCC---
Q 003700 602 KAHL---PSANEAIVIPT-QVNYVGKAANIFETGYKL-NGSAYVISKHIS---NVWLWDRVRVSGGAYGGFCDFDSH--- 670 (802)
Q Consensus 602 ~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-~~al~ll~~iLg---~s~L~~~iRekg~aY~~~~~~~~~--- 670 (802)
.++. .........|. +.....+.|+.++..+.. .-....+++++| .+-|-.-|.++|++=++.+.....
T Consensus 247 ~p~~~d~~t~~ii~i~p~~~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk~~Glit~l~a~~~~~~~n 326 (937)
T COG1025 247 VPVVTDEQTGKIIHIVPAKPRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLKKQGLITELSAGLDPISGN 326 (937)
T ss_pred CCCCChHHhCceEEeccCCCCceEEEEEEcCCcccccccCCHHHHHHHhccCCCchHHHHHHhccchhhhccccccccCC
Confidence 0111 11122222233 344555677777655544 557788889999 334557788899998888876543
Q ss_pred CceEEEEEEe-CC---ChHHHHHHHHhHHHHHhcCCCCHHHHHHHHH--HHHhhcccCCChHHHHHHHHHHHHhCCCHHH
Q 003700 671 SGVFSFLSYR-DP---NLLKTLDIYDGTVDFLRELEMDDDTLTKAII--GTIGDVDAYQLPDAKGYSSLLRHLLGITEEE 744 (802)
Q Consensus 671 ~g~~~~~~~~-~~---~~~~~~~~~~~~~~~l~~~~ite~eL~~ak~--~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 744 (802)
.|.+.+.... +. +..+.+..+.+-++.++..++....++.-.. .+...+.....+......... -+...+.+.
T Consensus 327 ~~~f~is~~LT~~Gl~~~~~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~-~m~~~p~~~ 405 (937)
T COG1025 327 YGVFAISYELTDKGLAHYDRVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLAD-NMEREPVEH 405 (937)
T ss_pred cceEEEEeehhhcchhhHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHH-hcccCChhh
Confidence 4545444322 22 3444444444455555777777777765433 222223322333332222222 233446665
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEcCh
Q 003700 745 RQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVASP 782 (802)
Q Consensus 745 ~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg~~ 782 (802)
.....--+..-.+++++.+..-.. + ++.++..+++.
T Consensus 406 ~~~~~~~~~~yd~~~~~~~l~~~~-p-en~R~~lis~~ 441 (937)
T COG1025 406 TLYASLVLPRYDPKAIQERLALMT-P-ENARLWLISKL 441 (937)
T ss_pred hhchhhcccccCHHHHHHHHHhhC-c-cceEEEEecCC
Confidence 555555666777888888888654 5 55666666543
No 21
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=6.7e-15 Score=167.66 Aligned_cols=393 Identities=11% Similarity=0.037 Sum_probs=261.2
Q ss_pred cccCCceEEEeecCCCceEEEEEEeeCCCC-CcccccChHHHHHhhhhcCCCCCC-HHHHHHHHhhcccceEEeeeeccC
Q 003700 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSL-KQELLPLIPLFCQSLKEMGTKDLS-FVQLDQLIGRKTGGISVYPFTSSI 441 (802)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~Gt~~~s-~~el~~~l~~~~~~~~~~~~~~~~ 441 (802)
.+.||+++++..+|..+...+.+-+.+|++ ++++.+++++|+++|...||++|+ ..++...+...||+-||+|.
T Consensus 32 ~L~Ngl~alLisDp~tD~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T~---- 107 (974)
T KOG0959|consen 32 ELTNGLRALLISDPKTDKSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYTD---- 107 (974)
T ss_pred EecCCceEEEecCCCCCccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCccccccc----
Confidence 578999999998887777888888888886 456677777776545559999986 56778888889999999998
Q ss_pred CCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhhHH
Q 003700 442 HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWI 521 (802)
Q Consensus 442 ~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 521 (802)
.+.+.|++.+..+.++.+|+.+++++..|.|. +++..+.+....++.+.+..+.+. ......++...++|++
T Consensus 108 ------~e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~-~~a~eREv~AVdSE~~~nl~~D~w-r~~ql~~~l~~~~hp~ 179 (974)
T KOG0959|consen 108 ------SEHTNYYFDVQHDHLEGALDRFAQFFSDPLFN-KSATEREVGAVDSEHEKNLNSDGW-RFDQLLRSLSNPGHPY 179 (974)
T ss_pred ------cccceEEEecchHHHHHHHHHHHHHhhCcccC-hHHHHHHHHHHHHHHHhccCcchh-HHHHHHHHhcCCCCcc
Confidence 57899999999999999999999999999999 466666666667777777665543 3334455666777777
Q ss_pred HHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCcccccc
Q 003700 522 SEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKW 601 (802)
Q Consensus 522 ~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 601 (802)
.. .+++..+.+....+ .. .+.+.|.+||+++|.+++|+++|.|+.+ .+.+..++.+.|+.++....+. +.+
T Consensus 180 ~k--F~tGN~~tL~~~p~----~~-~~r~~L~kF~k~~Yssn~M~l~i~G~es-lD~Le~lv~~~F~~i~N~~~~~-p~f 250 (974)
T KOG0959|consen 180 SK--FSTGNKKTLLEGPR----EI-DLRDELLKFYKNWYSSNIMTLVIVGKES-LDVLESLVTRLFDEISNKKKPR-PVF 250 (974)
T ss_pred hh--ccccchhhhhhccc----cc-hHHHHHHHHHHhhcccccceEEEEcCCC-hhHHHHHHHHHcccccccCCCC-Ccc
Confidence 64 34444555554321 11 5678999999999999999999999987 6788888999999887654432 222
Q ss_pred ccc-CC---CCcEEEEcCCC-ceEEEeecccCCCCC-CcchHHHHHHHHhc---CccchHhhhhcCCCCCccccccC---
Q 003700 602 KAH-LP---SANEAIVIPTQ-VNYVGKAANIFETGY-KLNGSAYVISKHIS---NVWLWDRVRVSGGAYGGFCDFDS--- 669 (802)
Q Consensus 602 ~~~-~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~-~d~~al~ll~~iLg---~s~L~~~iRekg~aY~~~~~~~~--- 669 (802)
+.+ .. -+......|.. ...+.+.|+.|+..+ -+.-+...+.+++| .+-|...||-+|+|=+..++...
T Consensus 251 ~~~p~~~e~~~~~~~v~pik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~~as 330 (974)
T KOG0959|consen 251 PEPPFLPEELKKLVRVVPIKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPEFAS 330 (974)
T ss_pred cCCCCChHHhCcEEEEEeccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCcccc
Confidence 211 11 12233334544 445667788877443 35567788888998 45677899999998887776542
Q ss_pred CCceEEEEEEe-CCChHHHHHHHHhHHHHH---hcCCCCHHHHHHHH--HHHHhhcccCCChHHHHHHHHHHHHhCCCHH
Q 003700 670 HSGVFSFLSYR-DPNLLKTLDIYDGTVDFL---RELEMDDDTLTKAI--IGTIGDVDAYQLPDAKGYSSLLRHLLGITEE 743 (802)
Q Consensus 670 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~l---~~~~ite~eL~~ak--~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 743 (802)
..+.+.+.+.. +.-.+...+++..+..++ ++.+.-..-++... ....-.+...+.|...+.....+ +.-.|.+
T Consensus 331 ~~~~f~v~idLtd~G~e~~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~n-lq~~P~~ 409 (974)
T KOG0959|consen 331 GYSFFNVSIDLTDEGLEHVDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASN-LQYYPVE 409 (974)
T ss_pred ccceEEEEEEeccccchhHHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhh-cccCChH
Confidence 24455555553 333445555555555554 44443332232221 11222222233444444333332 3345666
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEc
Q 003700 744 ERQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVA 780 (802)
Q Consensus 744 ~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg 780 (802)
..-.....+....++.|+.+... +.+ ...+++++.
T Consensus 410 ~il~~~~ll~~~~p~~i~~~~~~-L~p-~n~~v~~~s 444 (974)
T KOG0959|consen 410 DVLTGSYLLTEFDPDLIQEVLSS-LVP-SNMRVILVS 444 (974)
T ss_pred HhhcchhhhhhcChHHHHHHHHh-cCc-ccceeeeee
Confidence 66666667777888888887754 455 345555553
No 22
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.70 E-value=6.1e-14 Score=140.62 Aligned_cols=380 Identities=12% Similarity=0.058 Sum_probs=229.9
Q ss_pred ccccCCceEEEeecCCCceEEEEEEeeCCCCCc-ccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccC
Q 003700 363 VGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSI 441 (802)
Q Consensus 363 ~~~~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~~~~ 441 (802)
.++.||++|--.+.+ .++-.+.+.|+.|+.-+ .+..+++++.+......|.+++.-.|...++..||.++...+
T Consensus 26 ~kl~ngL~Vas~e~~-~~is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~t---- 100 (429)
T KOG2583|consen 26 TKLVNGLTVASREAP-TAISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTAT---- 100 (429)
T ss_pred hccccceEEEeccCC-CcceEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeeee----
Confidence 357899999777654 45889999999988643 344556666555566899999999999999999999998887
Q ss_pred CCCCCCceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhhHH
Q 003700 442 HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWI 521 (802)
Q Consensus 442 ~~~~~~~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 521 (802)
+|.+.+..+|+.++++-.+.+|.+++..|.|.+.|-.......+..++.. ..+...+.+.+-+..+.
T Consensus 101 ------Re~~~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~~---~t~~~~a~e~lH~aAfR---- 167 (429)
T KOG2583|consen 101 ------RELIGLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLAY---QTPYTIAIEQLHAAAFR---- 167 (429)
T ss_pred ------cceEEEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhhh---cChHHHHHHHHHHHHHh----
Confidence 89999999999999999999999999999999766433332333332221 23444444332221111
Q ss_pred HHHhccchHHH-----HHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCCc
Q 003700 522 SEQMGGVSYLE-----FLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPV 596 (802)
Q Consensus 522 ~~~~~g~~~~~-----~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~~ 596 (802)
+|++..- -+.++ ..++|+.|-++.|...|++++-+| ++ .+.++...++++- ++....
T Consensus 168 ----ngLgnslY~p~~~vg~v----------ss~eL~~Fa~k~fv~gn~~lvg~n-vd-~~~L~~~~~~~~~-~~~~~~- 229 (429)
T KOG2583|consen 168 ----NGLGNSLYSPGYQVGSV----------SSSELKDFAAKHFVKGNAVLVGVN-VD-HDDLKQFADEYAP-IRDGLP- 229 (429)
T ss_pred ----cccCCcccCCcccccCc----------cHHHHHHHHHHHhhccceEEEecC-CC-hHHHHHHHHHhcc-ccCCCC-
Confidence 1111000 01111 246899999999999999997776 45 3678888888832 221111
Q ss_pred ccccccccCCCCcEEEEcCCCceEEEeecccCC-CCCCcchHHHHHHHHhcCcc-------chHhhhhcCCCCCcccc--
Q 003700 597 ERVKWKAHLPSANEAIVIPTQVNYVGKAANIFE-TGYKLNGSAYVISKHISNVW-------LWDRVRVSGGAYGGFCD-- 666 (802)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~al~ll~~iLg~s~-------L~~~iRekg~aY~~~~~-- 666 (802)
....+.....+.....-...-.|++....+-. -+.+...+..++.++||.+- +.-++-...+-|++.++
T Consensus 230 -~k~a~a~~~gGe~Rk~~~g~~~~v~vagegAAa~~~k~~~a~av~~~~Lg~~~~~k~~t~~~~~aa~~a~~~~~s~sA~ 308 (429)
T KOG2583|consen 230 -LKPAPAKYSGGEARKDARGNRVHVAVAGEGAAAGNLKVLAAQAVLLAALGNSAPVKRGTGLLSEAAGAAGEQGASASAF 308 (429)
T ss_pred -CCCCCccccCCccccccCCceeEEEEecCcccccchHHHHHHHHHHHHHhcccccccccchHHHHHhhccccCceeeee
Confidence 01011111122222222333445655544433 34678889999999999321 12222222233555433
Q ss_pred c--cCCCceEEEEEE-eCCChHHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhcccCCChHHHHHHHHHHHHhCCCHH
Q 003700 667 F--DSHSGVFSFLSY-RDPNLLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAYQLPDAKGYSSLLRHLLGITEE 743 (802)
Q Consensus 667 ~--~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 743 (802)
. +.+.|++++++. .+++..++.+..-+.+...+..+++-.....+++-+.........+...+...... +-+ +.+
T Consensus 309 ~a~ysDsGL~gv~~~~~~~~a~~~v~s~v~~lks~~~~~id~~~~~a~~~~l~~~~~ss~~a~~~~~~~~a~-~~~-~~d 386 (429)
T KOG2583|consen 309 NAPYSDSGLFGVYVSAQGSQAGKVVSSEVKKLKSALVSDIDNAKVKAAIKALKASYLSSVEALELATGSQAN-LVS-EPD 386 (429)
T ss_pred cccccCCceEEEEEEecCccHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcchHHHHHhhHHHhc-CCC-ChH
Confidence 2 236788887754 34555555444333333334445555555555555554443322222222111111 111 333
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEcChhhHH
Q 003700 744 ERQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVASPDDVD 786 (802)
Q Consensus 744 ~~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg~~~~i~ 786 (802)
.+++.|++||..||.+++++++.. +..++.+|+-..++
T Consensus 387 ---~~i~~id~Vt~sdV~~a~kk~~s~--kls~aA~Gnl~~vP 424 (429)
T KOG2583|consen 387 ---AFIQQIDKVTASDVQKAAKKFLSG--KLSLAAYGNLSNVP 424 (429)
T ss_pred ---HHHHHhccccHHHHHHHHHHhccC--cceeeeeccccCCc
Confidence 789999999999999999999853 46778899876654
No 23
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.69 E-value=2.8e-16 Score=152.79 Aligned_cols=166 Identities=19% Similarity=0.189 Sum_probs=127.9
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCC---Cccccccccc--CCCCcEEEEc--CCCceEE
Q 003700 549 SSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNS---PVERVKWKAH--LPSANEAIVI--PTQVNYV 621 (802)
Q Consensus 549 ~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~--~~~~~~~~~~--~~~~~~~ 621 (802)
.++|++||+++|+|+|++++|+||++ .+++.+.++++|+.|+... .......... .......+.. +.+...+
T Consensus 4 ~e~l~~f~~~~y~p~n~~l~i~Gd~~-~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 82 (184)
T PF05193_consen 4 LEDLRAFYKKFYRPSNMTLVIVGDID-PDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQSIV 82 (184)
T ss_dssp HHHHHHHHHHHSSGGGEEEEEEESSG-HHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSSEEE
T ss_pred HHHHHHHHHHhcCccceEEEEEcCcc-HHHHHHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 57899999999999999999999998 5789999999999998653 1111111111 1111222222 2356778
Q ss_pred EeecccCCC-CCCcchHHHHHHHHhc---CccchHhhhh-cCCCCCccccccC--CCceEEEEEEeCC-ChHHHHHHHHh
Q 003700 622 GKAANIFET-GYKLNGSAYVISKHIS---NVWLWDRVRV-SGGAYGGFCDFDS--HSGVFSFLSYRDP-NLLKTLDIYDG 693 (802)
Q Consensus 622 ~~~~~~~~~-~~~d~~al~ll~~iLg---~s~L~~~iRe-kg~aY~~~~~~~~--~~g~~~~~~~~~~-~~~~~~~~~~~ 693 (802)
.+++++++. ++++..++.+++.+|+ +++|+..+|+ +|++|++++++.. ..|.+.+.+...| +..++.+.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 162 (184)
T PF05193_consen 83 SIAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYRDSGLFSISFQVTPENLDEAIEAILQ 162 (184)
T ss_dssp EEEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEESSEEEEEEEEEEEGGGHHHHHHHHHH
T ss_pred ccccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccccceEEEEEEEcCcccHHHHHHHHHH
Confidence 888988887 8999999999999999 4589999997 5999999998653 3577777766655 47788888888
Q ss_pred HHHHHhcCCCCHHHHHHHHHHH
Q 003700 694 TVDFLRELEMDDDTLTKAIIGT 715 (802)
Q Consensus 694 ~~~~l~~~~ite~eL~~ak~~l 715 (802)
.++.+++.+||++||+++|..|
T Consensus 163 ~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 163 ELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHHCS-HHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHhcC
Confidence 8888888899999999999875
No 24
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.57 E-value=1.2e-12 Score=147.40 Aligned_cols=389 Identities=12% Similarity=0.045 Sum_probs=246.3
Q ss_pred cCCceEEEeecCCCceEEEEEEeeCCCCCcccccChHHHHHhhhhcCCCCCCHHHHHH-HHhhcccc-eEEeeeeccCCC
Q 003700 366 INGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQ-LIGRKTGG-ISVYPFTSSIHG 443 (802)
Q Consensus 366 ~nG~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~-~l~~~~~~-~~~~~~~~~~~~ 443 (802)
..|+.++....+ .+-..+.+.|.+. |.+..+..+++.|+.+ +|+++|+..+.-- .+.+--.. +|+.|.
T Consensus 28 ~TGa~l~hi~~~-d~~~vFsi~F~T~--p~dstGVaHiLEHtvl-cGS~kYPvkdPF~~ml~rSLntF~NA~T~------ 97 (978)
T COG1026 28 KTGAELAHIKNE-DPNNVFSIAFKTE--PHDSTGVAHILEHTVL-CGSKKYPVKDPFFKMLKRSLNTFLNAFTF------ 97 (978)
T ss_pred cCCceEEEecCC-CcCceEEEEeecC--CCCCCCcchHHHHHhh-hCCCCCCCCChHHHHHHHhHHHHHhhccC------
Confidence 468887655433 3344566666653 4556677788888776 8999998766433 33332233 577776
Q ss_pred CCCCceeEEEEEEec-cccHHHHHHHHHHHHhcCCCCchHHHHHHHH--------------HHHHHhhhhhccCcHHHHH
Q 003700 444 KEDPCCCMVVRGKAM-AGQAEDLFNLFNCVLQEVQLTDQQRFKQFVS--------------QSKARMENRLRGSGHGIAA 508 (802)
Q Consensus 444 ~~~~~~~~~~~~~~l-~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~--------------~~~~~~~~~~~~~~~~~a~ 508 (802)
.|.++|-+++. .+++-.++....|.+.+|.+.+ +.|.+..- -..++++.... +++.+..
T Consensus 98 ----~D~T~YP~sS~~~~Df~NLl~VYlDavf~PlL~~-e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~s-s~~~~~~ 171 (978)
T COG1026 98 ----PDKTVYPASSANEKDFYNLLSVYLDAVFHPLLTK-ESFLQEGWRIEFKDESNLKYKGVVYNEMKGAYS-SGESVLS 171 (978)
T ss_pred ----CCcceeeccccCcchHHHHHHHHHHhhhCcccch-HHHhhhhhccccCCCccceeeeEEeehhccccc-CchhHHH
Confidence 56677776655 5799999999999999999985 43321110 01122333332 4677888
Q ss_pred HHHHhccChhhHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHH-H
Q 003700 509 ARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKF-L 587 (802)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~-~ 587 (802)
..+.+.++|+..|...-+|.+ .++. +...+++++||+++|+|+|+.+.+.||++ .++....++++ +
T Consensus 172 ~~~~~slfp~~ty~~~SGG~P-----~~I~-------~LtyE~~r~FHkk~Y~pSN~~i~~yGni~-~~~~L~~iee~~l 238 (978)
T COG1026 172 RAMQQSLFPGTTYGVNSGGDP-----KNIP-------DLTYEEFRAFHKKHYHPSNCKIFVYGNIP-TERLLDFIEEKVL 238 (978)
T ss_pred HHHHHhhCCCccccccCCCCc-----cccc-------ccCHHHHHHHHHHhCCccceEEEEECCCC-HHHHHHHHHHhhh
Confidence 888888888877766566654 2221 22368999999999999999999999998 67788888777 5
Q ss_pred hcCCCCCCcccccccccCCC-C--cEEEEc-----CCCceEEEeecccCCCCC-CcchHHHHHHHHhc---CccchHhhh
Q 003700 588 DMLPTNSPVERVKWKAHLPS-A--NEAIVI-----PTQVNYVGKAANIFETGY-KLNGSAYVISKHIS---NVWLWDRVR 655 (802)
Q Consensus 588 ~~l~~~~~~~~~~~~~~~~~-~--~~~~~~-----~~~~~~~~~~~~~~~~~~-~d~~al~ll~~iLg---~s~L~~~iR 655 (802)
...++.....+.++...... . .....+ +..+..+.++|.+++..+ .+..++.||..||- .+.|.+.|=
T Consensus 239 ~~~~k~~~~~~i~~~~~~~~~~~~~~~ypi~~~~~de~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~~~asPl~~~li 318 (978)
T COG1026 239 RPFGKRELDVPIPDQKAFKKPRRKVLEYPISFDEEDEDQGLLSLSWLGGSASDAEDSLALEVLEEILLDSAASPLTQALI 318 (978)
T ss_pred ccccccccCCCCCcccccCcccccceeeccCCCCCCCceeEEEEEEecCCcccHHHHHHHHHHHHHHccCcccHHHHHHH
Confidence 44443332111111111111 1 111122 122456778898877666 47899999999997 578999999
Q ss_pred hcCCC-CCccccccCC--CceEEEEEEeCC--ChHHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhccc-CCChHHH-
Q 003700 656 VSGGA-YGGFCDFDSH--SGVFSFLSYRDP--NLLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDA-YQLPDAK- 728 (802)
Q Consensus 656 ekg~a-Y~~~~~~~~~--~g~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~-~~~~~~~- 728 (802)
|-|++ +.++..+... ...|.+.+-..+ ..++..+.+..+++++.+.+++.+.++.++.++.-++.. ...|.+.
T Consensus 319 esglg~~~~~g~~~~~~~~~~f~v~~~gv~~ek~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~~s~pfgl~ 398 (978)
T COG1026 319 ESGLGFADVSGSYDSDLKETIFSVGLKGVSEEKIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEVKSYPFGLG 398 (978)
T ss_pred HcCCCcccccceeccccceeEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhhcCCCccHH
Confidence 98877 5444434433 445555443222 345566677778888888889999999999998888776 4444333
Q ss_pred -HHHHHHHHHhCCCHHHHHHHHHHHhc----CCHHH-HHHHHHHHHHhhCCCeEEEEcChh
Q 003700 729 -GYSSLLRHLLGITEEERQRRREEILS----TSLKD-FKEFADVLEAIKDRGVAVAVASPD 783 (802)
Q Consensus 729 -~~~~~~~~~~g~~~~~~~~~~~~i~~----vT~ed-i~~~a~~~l~~~~~~~~~vvg~~~ 783 (802)
+.+.+..++.|.++...-++...+++ +.... +.+++++||-......+++|-|..
T Consensus 399 l~~~~~~gw~~G~dp~~~Lr~~~~~~~Lr~~le~~~~fe~LI~ky~l~N~h~~~v~~~Ps~ 459 (978)
T COG1026 399 LMFRSLYGWLNGGDPEDSLRFLDYLQNLREKLEKGPYFEKLIRKYFLDNPHYVTVIVLPSP 459 (978)
T ss_pred HHHHhccccccCCChhhhhhhHHHHHHHHHhhhcChHHHHHHHHHhhcCCccEEEEEecCh
Confidence 33444446677766544333333322 33333 899999999863334555554443
No 25
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.55 E-value=3.9e-14 Score=142.00 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=150.3
Q ss_pred CcEEEEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHh
Q 003700 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (802)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~ 88 (802)
-++|++||++|+.++.|++|+|....++.|+.+|...+.++. +..|+.++.++.+|+..|.+. +..++++-.|.++.
T Consensus 47 ~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~s--e~~GG~Lss~~tRe~~~~tvt-~lrd~~~~~l~~L~ 123 (429)
T KOG2583|consen 47 SLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRES--EQLGGTLSSTATRELIGLTVT-FLRDDLEYYLSLLG 123 (429)
T ss_pred EEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhh--HhhCceeeeeeecceEEEEEE-EecccHHHHHHHHH
Confidence 357999999999999999999999999999999999988777 788999999999999999974 47799999999999
Q ss_pred hcccCCCCcccchhhhhhccccccCCCCCCCcch-hHHHhhhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCC
Q 003700 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYK-GVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPK 167 (802)
Q Consensus 89 d~~~~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~-~~v~~e~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~ 167 (802)
|++..|.|.+++ +... . ..+..+.- ..+|..++.+++++..|.+ .++++..-.--.+.+
T Consensus 124 ~V~~~paFkPwE--l~D~---------------~~~ti~~~l~--~~t~~~~a~e~lH~aAfRn-gLgnslY~p~~~vg~ 183 (429)
T KOG2583|consen 124 DVLDAPAFKPWE--LEDV---------------VLATIDADLA--YQTPYTIAIEQLHAAAFRN-GLGNSLYSPGYQVGS 183 (429)
T ss_pred HhhcccCcCchh--hhhh---------------hhhhhHHHhh--hcChHHHHHHHHHHHHHhc-ccCCcccCCcccccC
Confidence 999999999999 6432 2 34444443 3589999999999999987 777765544456889
Q ss_pred CCHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhh
Q 003700 168 LTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILS 204 (802)
Q Consensus 168 ~t~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~ 204 (802)
++.++|++|-.++|...|+.++-+| +|++.+..+.+
T Consensus 184 vss~eL~~Fa~k~fv~gn~~lvg~n-vd~~~L~~~~~ 219 (429)
T KOG2583|consen 184 VSSSELKDFAAKHFVKGNAVLVGVN-VDHDDLKQFAD 219 (429)
T ss_pred ccHHHHHHHHHHHhhccceEEEecC-CChHHHHHHHH
Confidence 9999999999999999999999999 99999999887
No 26
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.38 E-value=6.4e-12 Score=117.25 Aligned_cols=143 Identities=13% Similarity=0.096 Sum_probs=112.4
Q ss_pred eEEEeecCCCceEEEEEEeeCCCCCc-ccccChHH-HHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCCCCCCC
Q 003700 370 KVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPL-FCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGKEDP 447 (802)
Q Consensus 370 ~v~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~l-~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~~~~~~~~~~ 447 (802)
+|++...+..+++.+.++|++|+..+ ....+++. +.++++ .||++++..++.+.++..|+.++++++
T Consensus 1 ~V~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~-~gs~~~~~~~l~~~l~~~G~~~~~~t~---------- 69 (149)
T PF00675_consen 1 KVVLVEDPGSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLF-RGSKKYSSDELQEELESLGASFNASTS---------- 69 (149)
T ss_dssp EEEEEESTTSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTT-SBBSSSBHHHHHHHHHHTTCEEEEEEE----------
T ss_pred CEEEEEcCCCCEEEEEEEEeeccCCCCCCCCchhhhhhhhcc-cccchhhhhhhHHHhhhhccccceEec----------
Confidence 57888888999999999999997533 34445555 455555 899999999999999999999999998
Q ss_pred ceeEEEEEEeccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhccCcHHHHHHHHHhccChhhHHHHHh
Q 003700 448 CCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQM 525 (802)
Q Consensus 448 ~~~~~~~~~~l~~~l~~~l~ll~~~l~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 525 (802)
.+++.|++++++++++.+|+++++++.+|.|++ +.+.+.+.....+++.... ++..++...+.+..+.+++|..+.
T Consensus 70 ~d~t~~~~~~~~~~~~~~l~~l~~~~~~P~f~~-~~~~~~r~~~~~ei~~~~~-~~~~~~~~~l~~~~f~~~p~~~~~ 145 (149)
T PF00675_consen 70 RDSTSYSASVLSEDLEKALELLADMLFNPSFDE-EEFEREREQILQEIEEIKE-NPQELAFEKLHSAAFRGHPYGNPL 145 (149)
T ss_dssp SSEEEEEEEEEGGGHHHHHHHHHHHHHSBGGCH-HHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHTTSGGGSHS
T ss_pred ccceEEEEEEecccchhHHHHHHHHHhCCCCCH-HHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHhccCCCCCCC
Confidence 799999999999999999999999999999995 6566666666655655433 346677777777776666665443
No 27
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=1.1e-08 Score=109.34 Aligned_cols=390 Identities=13% Similarity=0.039 Sum_probs=223.2
Q ss_pred CCceEEEeecCCCceEEEEEEeeCCCCCcccccChHHHHHhhhhcCCCCCCHHHHHHHHhhc-ccceEEeeeeccCCCCC
Q 003700 367 NGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRK-TGGISVYPFTSSIHGKE 445 (802)
Q Consensus 367 nG~~v~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~-~~~~~~~~~~~~~~~~~ 445 (802)
-|++|...+.|+. ++.-.+.+.+.... +.+.-+-+.++.+ .|+++|+..-+-..+.+. -+..|+-++
T Consensus 28 Tkl~va~~~~pts-~vhG~f~v~TEa~~--d~G~PHTLEHL~F-MGSKkYP~kGvLd~~anr~l~dtNAwTD-------- 95 (1022)
T KOG0961|consen 28 TKLRVAIGEVPTS-MVHGAFSVVTEADS--DDGLPHTLEHLVF-MGSKKYPFKGVLDVIANRCLADTNAWTD-------- 95 (1022)
T ss_pred cceEEEEeecCCc-ceeeeEEeeeeecC--CCCCchhHHHHhh-hccccCCcccHHHHhhcchhcccccccc--------
Confidence 3567766666666 66655555554333 3344466777776 899999998877776663 444566554
Q ss_pred CCceeEEEEEEec-cccHHHHHHHHHHHHhcCCCCchHHHH-------------HHHHHHHHHhhhhhccCcHHHHHHHH
Q 003700 446 DPCCCMVVRGKAM-AGQAEDLFNLFNCVLQEVQLTDQQRFK-------------QFVSQSKARMENRLRGSGHGIAAARM 511 (802)
Q Consensus 446 ~~~~~~~~~~~~l-~~~l~~~l~ll~~~l~~p~f~~~~~~~-------------~i~~~~~~~~~~~~~~~~~~~a~~~~ 511 (802)
.+++.+.+++. .+.+-+.|....|.+..|.+.| +++- .++-.+.+..+. .+..+.....
T Consensus 96 --tD~T~YtLStag~dGFlklLPvy~dHiL~P~Ltd-eaf~TEVyHI~geg~d~GVVySEMq~~es----~~~~im~~~~ 168 (1022)
T KOG0961|consen 96 --TDHTAYTLSTAGSDGFLKLLPVYIDHILTPMLTD-EAFATEVYHITGEGNDAGVVYSEMQDHES----EMESIMDRKT 168 (1022)
T ss_pred --cCcceEEeecccccchHHHhHHHHHhhcCcccch-hhhhhheeeecCCCCccceeehhhhhhhc----ccchhhhhhh
Confidence 46677777765 5789999999999999999996 4332 122223333332 3445666666
Q ss_pred HhccChh-hHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcC
Q 003700 512 DAKLNTA-GWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDML 590 (802)
Q Consensus 512 ~~~~~~~-~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l 590 (802)
+..++|. +.|....+|.. +++.+ .+.+.+++||+++|.++|+.+.|+|.++ .+++....+.+-..+
T Consensus 169 ~~~~yP~~sgY~~eTGG~~-----knLR~-------lt~ekIR~yHK~~Y~~sN~cviVcG~v~-~d~lL~~m~~~~nei 235 (1022)
T KOG0961|consen 169 KEVIYPPFSGYAVETGGRL-----KNLRE-------LTLEKIRDYHKKFYHLSNMCVIVCGMVD-HDQLLEIMNNVENEI 235 (1022)
T ss_pred heeecCCCCCceeccCCCh-----hhHHH-------hhHHHHHHHHHHhccccceEEEEecCcC-HHHHHHHHHHHHhhh
Confidence 6655543 34444444442 33322 2468999999999999999999999998 578887777776655
Q ss_pred CCCCCccccccccc----------CCCCcEEEEcCCC---ceEEEeecccCCCCC-CcchHHHHHHHHhcCc---cchHh
Q 003700 591 PTNSPVERVKWKAH----------LPSANEAIVIPTQ---VNYVGKAANIFETGY-KLNGSAYVISKHISNV---WLWDR 653 (802)
Q Consensus 591 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~d~~al~ll~~iLg~s---~L~~~ 653 (802)
+......+..|+.| .......+..|.. ...+..+|.++++.+ ....++.||-.+|+.| .+-+.
T Consensus 236 le~~s~vP~~~~rPf~~tn~~~~i~e~t~~tVefp~~Des~G~v~~aW~g~s~sD~~t~~a~~vL~dyls~savapf~~~ 315 (1022)
T KOG0961|consen 236 LEHMSTVPDHFPRPFSFTNALSDIKESTVHTVEFPTDDESRGAVEVAWFGHSPSDLETHSALHVLFDYLSNSAVAPFQKD 315 (1022)
T ss_pred hhccccCCCCCCCCcccccCcccCCccceeeeecCCcccccceEEEEEcCCCHHHhhhHHHHHHHHHHhccccccccccc
Confidence 43322111112111 0111222333332 335667787777665 3567999999999843 44444
Q ss_pred hhh-c-CCCCCccccccCC-CceEEEEEEeCCChHHHHHHHHhHHHHH-hcCCCCHHHHHHHHHHHHhhccc-CC--ChH
Q 003700 654 VRV-S-GGAYGGFCDFDSH-SGVFSFLSYRDPNLLKTLDIYDGTVDFL-RELEMDDDTLTKAIIGTIGDVDA-YQ--LPD 726 (802)
Q Consensus 654 iRe-k-g~aY~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~ite~eL~~ak~~l~~~~~~-~~--~~~ 726 (802)
.-| . -+|-+++...... ...+.+.+. +.-.++..+.-.+.++.+ ....|+-+-+.....+.+-++.. .+ .++
T Consensus 316 fVeieDP~assv~f~~~~~vrc~i~L~f~-gVP~EKi~~~~~k~l~~l~et~~iDm~Rm~~~i~~t~~~yL~nlE~n~~s 394 (1022)
T KOG0961|consen 316 FVEIEDPLASSVSFHIAEGVRCDIRLNFA-GVPVEKIDECAPKFLDKLVETANIDMERMGYLIDQTILNYLVNLETNAPS 394 (1022)
T ss_pred eEEecCccccceeeeeecccceeEEEeec-CCcHHHhhhhhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcCChH
Confidence 444 2 4565554443311 222222221 222233333334444444 34456554444333332222222 22 234
Q ss_pred HHHHHHHHHHHhCCCHHH-------HHHHHHHHhcCCHHHHHHHHHHHHHhhCCCeEEEEcCh--hhHHHhhhh
Q 003700 727 AKGYSSLLRHLLGITEEE-------RQRRREEILSTSLKDFKEFADVLEAIKDRGVAVAVASP--DDVDAANKE 791 (802)
Q Consensus 727 ~~~~~~~~~~~~g~~~~~-------~~~~~~~i~~vT~edi~~~a~~~l~~~~~~~~~vvg~~--~~i~~~~~~ 791 (802)
..+......+++|..... .-++.+.+.+-...|-.++.++||.. ...+.|++-| +..+..+|+
T Consensus 395 ~fms~ii~d~~ygnedg~~l~~~lk~l~~~~~L~~w~~kdW~~Llnk~Fve--n~s~tVia~Ps~em~e~i~kE 466 (1022)
T KOG0961|consen 395 DFMSHIIGDQLYGNEDGELLKKRLKELDFLKKLKSWPAKDWVQLLNKYFVE--NPSATVIAVPSEEMVEKIAKE 466 (1022)
T ss_pred HHHHHHhhhhhccCcchhHHHHHHHhHHHHHHHhhccHHHHHHHHHHHhcc--CCCeEEEecCcHHHHHHHHHH
Confidence 444455555777643321 12456778888999999999999984 2334445433 444555554
No 28
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=3.7e-08 Score=105.58 Aligned_cols=385 Identities=11% Similarity=0.072 Sum_probs=224.0
Q ss_pred cCCceEEEee-cCCCceEEEEEEeeCCCCCcccccChHHHHHhhhhcCCCCCCHHH-HHHHHhhccc-ceEEeeeeccCC
Q 003700 366 INGVKVLQHD-LFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQ-LDQLIGRKTG-GISVYPFTSSIH 442 (802)
Q Consensus 366 ~nG~~v~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~e-l~~~l~~~~~-~~~~~~~~~~~~ 442 (802)
.-|..++... ..+|.+. ++.|.+. |.+..+.-+++.+... .|+.+|+-.+ +-+.+.+.-+ -+|+++.
T Consensus 60 ~Tgae~lhl~reD~N~vF--sI~FrTp--p~dstGiPHILEHtvL-CGS~KYPvrdPFfkmLnrSLatFmNAfT~----- 129 (998)
T KOG2019|consen 60 KTGAEVLHLDREDENNVF--SIVFRTP--PKDSTGIPHILEHTVL-CGSRKYPVRDPFFKMLNRSLATFMNAFTA----- 129 (998)
T ss_pred CCCceeEeeccCCCCcee--EEEeecC--CCccCCCchhhhhhee-eccCcCcccChHHHHHHHHHHHHHhhccC-----
Confidence 3577775443 3455454 4455543 3344455577777665 8999886543 4444444322 3577776
Q ss_pred CCCCCceeEEEEEE-eccccHHHHHHHHHHHHhcCCCCchH--------------------HHH-HHHHHHHHHhhhhhc
Q 003700 443 GKEDPCCCMVVRGK-AMAGQAEDLFNLFNCVLQEVQLTDQQ--------------------RFK-QFVSQSKARMENRLR 500 (802)
Q Consensus 443 ~~~~~~~~~~~~~~-~l~~~l~~~l~ll~~~l~~p~f~~~~--------------------~~~-~i~~~~~~~~~~~~~ 500 (802)
.+++.|=.. +-.+++....+...|....|.+...+ .++ .+.++++-.+.
T Consensus 130 -----pD~T~yPfattN~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S---- 200 (998)
T KOG2019|consen 130 -----PDYTFYPFATTNTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYS---- 200 (998)
T ss_pred -----CCcceeecccCChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeeccccccc----
Confidence 455555443 34678888888877777777654211 122 12234443332
Q ss_pred cCcHHHHHHHHHhccChhhHHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHH
Q 003700 501 GSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSE 580 (802)
Q Consensus 501 ~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~ 580 (802)
++ ..+....+...++|.+-|+-.-+|-+ ..+ ++...++|++||+++|+|+|+.+...||+. .++..
T Consensus 201 ~~-~~if~~~~Qq~L~p~~tYgv~SGGDP-----l~I-------pdLt~eelk~FHr~~YHPSNAri~tYGn~P-l~~~l 266 (998)
T KOG2019|consen 201 DP-DYIFGMLFQQALFPENTYGVNSGGDP-----LDI-------PDLTYEELKEFHRQHYHPSNARIFTYGNFP-LEDLL 266 (998)
T ss_pred Ch-hHHHHHHHHHhhCccccccccCCCCc-----ccC-------ccccHHHHHHHHHhccCCCcceeEeecCch-HHHHH
Confidence 22 33444444455666555443333322 111 123468899999999999999999999986 67776
Q ss_pred HHHHHHHhcCCCCCCcccccccccCCCCcEEEEc--------CCCceEEEeecccCCCCC-CcchHHHHHHHHhc---Cc
Q 003700 581 RFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVI--------PTQVNYVGKAANIFETGY-KLNGSAYVISKHIS---NV 648 (802)
Q Consensus 581 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~d~~al~ll~~iLg---~s 648 (802)
..++.-|....+.....+..+........+.+.. |..+.-+.+.|...+..+ -+..+|.||..++- +|
T Consensus 267 ~~l~e~~~~~sk~~~s~kv~~qk~f~kp~rvve~~p~d~~~~p~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gpsS 346 (998)
T KOG2019|consen 267 KQLEEDFSPFSKRELSSKVTFQKLFDKPRRVVEKGPADPGDLPKKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPSS 346 (998)
T ss_pred HHHHHhhcccccccccCccccccccccCceeeeecCCCCCCCccceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCcc
Confidence 6666555444333221111111111111111111 222334445554444333 36789999999986 78
Q ss_pred cchHhhhhcCC--CCCccccccCC--CceEEEEEEe--CCChHHHHHHHHhHHHHHhcCCCCHHHHHHHHHHHHhhcccC
Q 003700 649 WLWDRVRVSGG--AYGGFCDFDSH--SGVFSFLSYR--DPNLLKTLDIYDGTVDFLRELEMDDDTLTKAIIGTIGDVDAY 722 (802)
Q Consensus 649 ~L~~~iRekg~--aY~~~~~~~~~--~g~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~ite~eL~~ak~~l~~~~~~~ 722 (802)
.+++.+=|.|+ -.++++++... .+.|++..-. ..++++..+.+..++..|...+|+.+-++....++--++...
T Consensus 347 p~yk~LiESGLGtEfsvnsG~~~~t~~~~fsVGLqGvseediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~q 426 (998)
T KOG2019|consen 347 PFYKALIESGLGTEFSVNSGYEDTTLQPQFSVGLQGVSEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKHQ 426 (998)
T ss_pred HHHHHHHHcCCCcccccCCCCCcccccceeeeeeccccHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhcc
Confidence 99999999764 58889988865 4444444322 226677777888888888888999999998888777666543
Q ss_pred CChHH--HHHHHHHHHHhCCCH-------HHHHHHHHHHhcCCHHHHHHHHHHHHHhhC-CCeEEEEcChh
Q 003700 723 QLPDA--KGYSSLLRHLLGITE-------EERQRRREEILSTSLKDFKEFADVLEAIKD-RGVAVAVASPD 783 (802)
Q Consensus 723 ~~~~~--~~~~~~~~~~~g~~~-------~~~~~~~~~i~~vT~edi~~~a~~~l~~~~-~~~~~vvg~~~ 783 (802)
.+..+ .+......|.++.++ +..+.++.++..-.+.=++..+++|+.... ..++.+-++++
T Consensus 427 st~fGL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~lk~~l~ek~~~lfq~lIkkYilnn~h~~t~smqpd~e 497 (998)
T KOG2019|consen 427 STGFGLSLMQSIISKWINDMDPFEPLKFEEQLKKLKQRLAEKSKKLFQPLIKKYILNNPHCFTFSMQPDPE 497 (998)
T ss_pred ccchhHHHHHHHhhhhccCCCccchhhhhhHHHHHHHHHhhhchhHHHHHHHHHHhcCCceEEEEecCCch
Confidence 22222 222333335666543 334566666666678889999999987533 23344334444
No 29
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=98.90 E-value=4.1e-09 Score=102.16 Aligned_cols=154 Identities=19% Similarity=0.309 Sum_probs=89.6
Q ss_pred CCCHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhcccccccccc---cccCCC-Ccc----hhHHHHHh------
Q 003700 167 KLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSL---RENNTG-SFP----RGLSLMLR------ 232 (802)
Q Consensus 167 ~~t~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~~~~---~~~~~~-~~~----~~~~~~~~------ 232 (802)
++|.++|++||++||+|+||+++++||++++++.++|+ +.|+.++... ...... ..+ .+......
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIE-KYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQ 79 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHH-HHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSS
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHH-hhhhhhccccccccccccccccccccccccccccccccccc
Confidence 58999999999999999999999999999999999998 7887776432 111100 000 00000000
Q ss_pred --hhcccccCCCCccCcccchHHHHHHHHHhccCCcchHHHHHHH-hhc----------c--CCCeeEEEEecCcchhhH
Q 003700 233 --SMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEK-YIL----------N--NPHCVTVEMQPDPEKASR 297 (802)
Q Consensus 233 --~~~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~~~~~~~~l~~~-~~~----------~--~~~~~~~~~~p~~~~~~~ 297 (802)
..-.|..... ........+..+...+....+++++..+.++ .+. . +.+.+.+.+.|+ ....
T Consensus 80 ~~v~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~~~i~~~~~~~--~~~~ 155 (184)
T PF05193_consen 80 SIVSIAFPGPPI--KDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYRDSGLFSISFQVTPE--NLDE 155 (184)
T ss_dssp EEEEEEEEEEET--GTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEESSEEEEEEEEEEEGG--GHHH
T ss_pred cccccccccccc--cccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccccceEEEEEEEcCcc--cHHH
Confidence 0001111100 0112244566777777765555688888733 221 0 223444445454 3344
Q ss_pred HHHHHHHHHHHH-HhcCCHHHHHHHHHHH
Q 003700 298 DEAAEKEILAKV-KSSMTKEDLAELARAT 325 (802)
Q Consensus 298 ~~~~~~~~l~~~-~~~~t~~el~~~~~~~ 325 (802)
..+...+.++.+ ..|+|++|++++|+++
T Consensus 156 ~~~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 156 AIEAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 555666667766 6679999999999853
No 30
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=93.01 E-value=0.19 Score=53.17 Aligned_cols=161 Identities=17% Similarity=0.218 Sum_probs=91.6
Q ss_pred EEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHhhccc
Q 003700 13 GIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFDAVF 92 (802)
Q Consensus 13 ~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~d~~~ 92 (802)
+.|+-.+-.+--|+||+|||.+-. ++... + - .||+|++.+-+|...+........++.-+..|++
T Consensus 26 ~FGFe~DI~~iLGiAHLLEHILIs----FD~~~----F-----~--ANASTaRsYMSFWC~si~g~~~~DAvrtliSWFF 90 (590)
T PF03410_consen 26 NFGFENDIGEILGIAHLLEHILIS----FDSSK----F-----L--ANASTARSYMSFWCKSIRGRTYIDAVRTLISWFF 90 (590)
T ss_pred ccccccchHHHHhHHHHHHHHeee----cchHH----h-----h--cccchhhhhhhhhhhhccCCChhHHHHHHHHHhh
Confidence 456666677789999999999863 22211 1 1 5999999999998654443455567777777777
Q ss_pred CCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhh--ccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCCC-
Q 003700 93 FPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKG--VYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLT- 169 (802)
Q Consensus 93 ~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~~t- 169 (802)
.-.-..+. |.... ...-..|++. ...+......+. ...|.+|.-| -+|-...+++++
T Consensus 91 ~~g~Lk~~--F~~~~--------------i~~hikELENEYYFRnEvfHCmDv-LtfL~gGDLY---NGGRi~ML~~l~~ 150 (590)
T PF03410_consen 91 DNGKLKDN--FSRSK--------------IKNHIKELENEYYFRNEVFHCMDV-LTFLGGGDLY---NGGRIDMLNNLND 150 (590)
T ss_pred cCCccccc--ccHhH--------------HHHHHHHHhhhhhhhhhHHHHHHH-HHHhcCCccc---CCchHHHHhhhHH
Confidence 64433444 54321 1122233321 111112222222 2334444444 245555665554
Q ss_pred -HHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhccccccc
Q 003700 170 -FEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE 212 (802)
Q Consensus 170 -~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~ 212 (802)
++-|..=-++--.| |.+|+| -.++ +.++++++ +.|+++|
T Consensus 151 i~~mL~~RM~~I~Gp-niVIFV-k~l~-~~~l~lL~-~TFGtLP 190 (590)
T PF03410_consen 151 IRNMLSNRMHRIIGP-NIVIFV-KELN-PNILSLLS-NTFGTLP 190 (590)
T ss_pred HHHHHHHHHHhhcCC-cEEEEE-eccC-HHHHHHHH-HhcCCCC
Confidence 34555555555555 555554 4477 45788897 8898876
No 31
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=92.60 E-value=1.6 Score=46.49 Aligned_cols=188 Identities=14% Similarity=0.123 Sum_probs=88.4
Q ss_pred cccCCceEEEeecCCCceEEEEEE-eeCCCCCcccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCC
Q 003700 364 GDINGVKVLQHDLFTNDVLYTEVV-FDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH 442 (802)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~~~~~ 442 (802)
.++||++|.+.+.-.. -+|+.+. ||...--.+-.+.++|++|.|-.. +.. .. -.|++|+
T Consensus 3 vL~NGVRiFin~~M~K-DIYlGIs~FGFe~DI~~iLGiAHLLEHILIsF-----D~~-------~F--~ANASTa----- 62 (590)
T PF03410_consen 3 VLSNGVRIFINPSMKK-DIYLGISNFGFENDIGEILGIAHLLEHILISF-----DSS-------KF--LANASTA----- 62 (590)
T ss_pred EecCceEEEecCcccc-ceEEeecccccccchHHHHhHHHHHHHHeeec-----chH-------Hh--hcccchh-----
Confidence 4789999988765444 4577664 555432234566677788876542 222 11 2356665
Q ss_pred CCCCCceeEEEEEEecccc-HHHHHHHHHHHHh-cCCCCchHHHHHHHHHHHHHhhhhhccCcH-HHHHHHHHhccChhh
Q 003700 443 GKEDPCCCMVVRGKAMAGQ-AEDLFNLFNCVLQ-EVQLTDQQRFKQFVSQSKARMENRLRGSGH-GIAAARMDAKLNTAG 519 (802)
Q Consensus 443 ~~~~~~~~~~~~~~~l~~~-l~~~l~ll~~~l~-~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~ 519 (802)
+.++.+....+... .-+++.-+...+. +-.+.+ ..-...++....++++...-.-. --+...+ .++.++
T Consensus 63 -----RsYMSFWC~si~g~~~~DAvrtliSWFF~~g~Lk~-~F~~~~i~~hikELENEYYFRnEvfHCmDvL-tfL~gG- 134 (590)
T PF03410_consen 63 -----RSYMSFWCKSIRGRTYIDAVRTLISWFFDNGKLKD-NFSRSKIKNHIKELENEYYFRNEVFHCMDVL-TFLGGG- 134 (590)
T ss_pred -----hhhhhhhhhhccCCChhHHHHHHHHHhhcCCcccc-cccHhHHHHHHHHHhhhhhhhhhHHHHHHHH-HHhcCC-
Confidence 56666666666544 4455554444443 333332 11112223333444443210000 0011111 122221
Q ss_pred HHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCC
Q 003700 520 WISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSP 595 (802)
Q Consensus 520 ~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~ 595 (802)
. .++| +...-+.+ ++.+.+-|.+=.++.-. .|+++ .+-..+ +.+..++++.||.||+.+.
T Consensus 135 D---LYNG-GRi~ML~~--------l~~i~~mL~~RM~~I~G-pniVI-FVk~l~--~~~l~lL~~TFGtLP~cP~ 194 (590)
T PF03410_consen 135 D---LYNG-GRIDMLNN--------LNDIRNMLSNRMHRIIG-PNIVI-FVKELN--PNILSLLSNTFGTLPSCPL 194 (590)
T ss_pred c---ccCC-chHHHHhh--------hHHHHHHHHHHHHhhcC-CcEEE-EEeccC--HHHHHHHHHhcCCCCCCcc
Confidence 1 1222 11111222 12233333333333333 34444 455565 3688999999999998764
No 32
>PHA03081 putative metalloprotease; Provisional
Probab=90.60 E-value=0.43 Score=50.66 Aligned_cols=161 Identities=16% Similarity=0.217 Sum_probs=95.4
Q ss_pred EEEecCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCccccccccCCceEEEeccCCHHhHHHHHHHHhhccc
Q 003700 13 GIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFDAVF 92 (802)
Q Consensus 13 ~~g~~~e~~~~~G~ah~leh~~~~gs~~~~~~~~~~~~~~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~~~~d~~~ 92 (802)
+.|+-.+-.+--|+||+|||.+-. ++.. .+ - .||+|++.+.+|...+........++.-+..|++
T Consensus 26 ~fgfe~di~~~lg~ahllehili~----fd~~----~f-----~--anast~r~ymsfwc~sirg~~y~DAvrtliSWFF 90 (595)
T PHA03081 26 NFGFENDIGEILGIAHLLEHILIS----FDSS----KF-----V--ANASTARSYMSFWCKSIRGRSYIDAIRTLISWFF 90 (595)
T ss_pred ccccccchHHHHhHHHHHHHHeee----cchH----Hh-----c--ccchhhhhhHhHhhHhhcCCchHHHHHHHHHHhc
Confidence 455666667789999999999863 2211 11 1 5899999999988644344446678888899999
Q ss_pred CCCCcccchhhhhhccccccCCCCCCCcchhHHHhhhhh--ccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCCC-
Q 003700 93 FPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKG--VYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLT- 169 (802)
Q Consensus 93 ~p~~~~~~~~~~~e~~~~e~~~~~~~~~e~~~v~~e~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~G~~~~i~~~t- 169 (802)
.+.-..+. |.... ...-..|++. ...+......+. ...|.+|.-| -+|-...++++.
T Consensus 91 ~~~~Lr~~--F~~~~--------------ik~~ikELENEYYFRnEvfHCmDv-LTfL~gGDLY---NGGRi~ML~~l~~ 150 (595)
T PHA03081 91 DNGKLKDN--FSLSK--------------IRNHIKELENEYYFRNEVFHCMDV-LTFLGGGDLY---NGGRIDMLDNLND 150 (595)
T ss_pred cCCccccc--cchhh--------------HHHHHHHHhhhhhhhhhhHHHHHH-HHHhcCCccc---CCchHHHHhhhHH
Confidence 88766666 65431 1122233321 111222223332 2344444444 256666666654
Q ss_pred -HHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHhhhccccccc
Q 003700 170 -FEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIE 212 (802)
Q Consensus 170 -~~~l~~f~~~~y~p~n~~i~~~Gd~~~~~~~~~i~~~~~~~~~ 212 (802)
++-|..=-++--.| |.+|+| -.++ +.++.+++ +.|+++|
T Consensus 151 i~~~L~~RM~~I~Gp-niVIFV-k~ln-~~~l~lL~-~TFGtLP 190 (595)
T PHA03081 151 VRDMLSNRMHRISGP-NIVIFV-KELN-PNTLSLLN-NTFGTLP 190 (595)
T ss_pred HHHHHHHHHHhhcCC-cEEEEE-eccC-HHHHHHHH-HhcCCCC
Confidence 34455555555455 555554 4477 45788897 8888876
No 33
>PHA03081 putative metalloprotease; Provisional
Probab=89.08 E-value=4.9 Score=43.11 Aligned_cols=188 Identities=14% Similarity=0.122 Sum_probs=86.5
Q ss_pred cccCCceEEEeecCCCceEEEEEE-eeCCCCCcccccChHHHHHhhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCC
Q 003700 364 GDINGVKVLQHDLFTNDVLYTEVV-FDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH 442 (802)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~~~~~~~~~~~~~~~~ 442 (802)
.+.||+++.+.+.-.. -+|+.+. |+...--.+-.+.++++++.|-.. +.. .. -.|+++.
T Consensus 3 ~~~ngvr~f~~~~m~k-diy~gi~~fgfe~di~~~lg~ahllehili~f-----d~~-------~f--~anast~----- 62 (595)
T PHA03081 3 VLSNGVRIFINPSMKK-DIYLGISNFGFENDIGEILGIAHLLEHILISF-----DSS-------KF--VANASTA----- 62 (595)
T ss_pred EecCceEEEecCcccc-ceEEeecccccccchHHHHhHHHHHHHHeeec-----chH-------Hh--cccchhh-----
Confidence 4689999987765444 3466653 454432224456667777766532 222 11 2345554
Q ss_pred CCCCCceeEEEEEEeccc-cHHHHHHHHHHHHhcCC-CCchHHHHHHHHHHHHHhhhhhccCcH-HHHHHHHHhccChhh
Q 003700 443 GKEDPCCCMVVRGKAMAG-QAEDLFNLFNCVLQEVQ-LTDQQRFKQFVSQSKARMENRLRGSGH-GIAAARMDAKLNTAG 519 (802)
Q Consensus 443 ~~~~~~~~~~~~~~~l~~-~l~~~l~ll~~~l~~p~-f~~~~~~~~i~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~ 519 (802)
+.++.+....+.. ...+++.-+...+.++. +.+ ..-..-++....++++...-.-. --+...+ .++.++
T Consensus 63 -----r~ymsfwc~sirg~~y~DAvrtliSWFF~~~~Lr~-~F~~~~ik~~ikELENEYYFRnEvfHCmDvL-TfL~gG- 134 (595)
T PHA03081 63 -----RSYMSFWCKSIRGRSYIDAIRTLISWFFDNGKLKD-NFSLSKIRNHIKELENEYYFRNEVFHCMDVL-TFLGGG- 134 (595)
T ss_pred -----hhhHhHhhHhhcCCchHHHHHHHHHHhccCCcccc-ccchhhHHHHHHHHhhhhhhhhhhHHHHHHH-HHhcCC-
Confidence 4445554444432 24567776666665543 221 11112233444445443210000 0111111 122221
Q ss_pred HHHHHhccchHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCCcEEEEEeCccchhhHHHHHHHHHhcCCCCCC
Q 003700 520 WISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSP 595 (802)
Q Consensus 520 ~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~l~v~Gd~~~~~~~~~~~~~~~~~l~~~~~ 595 (802)
. .++| +...-+.++ +.+.+-|.+=.++.-. .|+++ .+-..+ ..+..++.+.||.||+.+.
T Consensus 135 D---LYNG-GRi~ML~~l--------~~i~~~L~~RM~~I~G-pniVI-FVk~ln--~~~l~lL~~TFGtLP~~P~ 194 (595)
T PHA03081 135 D---LYNG-GRIDMLDNL--------NDVRDMLSNRMHRISG-PNIVI-FVKELN--PNTLSLLNNTFGTLPSCPE 194 (595)
T ss_pred c---ccCC-chHHHHhhh--------HHHHHHHHHHHHhhcC-CcEEE-EEeccC--HHHHHHHHHhcCCCCCCcc
Confidence 1 1222 111112221 2223333332333333 34444 455565 3588999999999998764
No 34
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=55.10 E-value=32 Score=21.87 Aligned_cols=20 Identities=5% Similarity=0.125 Sum_probs=16.8
Q ss_pred HhcCCCCHHHHHHHHHHHHh
Q 003700 698 LRELEMDDDTLTKAIIGTIG 717 (802)
Q Consensus 698 l~~~~ite~eL~~ak~~l~~ 717 (802)
..++.||++|.++.|..+++
T Consensus 12 ~~~G~IseeEy~~~k~~ll~ 31 (31)
T PF09851_consen 12 YDKGEISEEEYEQKKARLLS 31 (31)
T ss_pred HHcCCCCHHHHHHHHHHHhC
Confidence 35788999999999998763
No 35
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=28.41 E-value=39 Score=34.16 Aligned_cols=71 Identities=8% Similarity=0.024 Sum_probs=41.6
Q ss_pred HHHHHHhcc-CCCCCCCCcHHHHHHhhccCccccccc----cC----CceEE-Ee-ccCCHHhHHHHHHHHhhcccCCCC
Q 003700 28 HILEHSVLC-GSRKYPLKEPFVELLKGSLNTFLNAFT----YP----DRTCY-PV-ASTNTKDFYNLVDVYFDAVFFPKC 96 (802)
Q Consensus 28 h~leh~~~~-gs~~~~~~~~~~~~~~~~~g~~~na~t----~~----d~t~y-~~-~~~~~~~~~~~l~~~~d~~~~p~~ 96 (802)
-++..++.+ ||++++..++ ...+....|+ +++.+ +. ....+ .+ ..+..++++++++++.+++.+|.|
T Consensus 112 ~Ll~~ll~~lgT~~~sy~el-~~~i~~~tGG-is~~~~~~~~~~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f 189 (248)
T PF08367_consen 112 PLLTDLLGELGTKNYSYEEL-SNEIDLYTGG-ISFSIEVYTDYDDDDKYRPYLVISAKCLDEKLDEAFELLSEILTETDF 189 (248)
T ss_dssp HHHHHHCCCS-BSSS-HHHH-HHHHHHHSSE-EEEEEEEEEEECTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-T
T ss_pred HHHHHHHHhCCCCCCCHHHH-HHHHHHhCCC-eEEEeeeccCCCCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhccCC
Confidence 445555555 9999998874 4444344443 33332 22 11111 12 235789999999999999999999
Q ss_pred cccc
Q 003700 97 VEDF 100 (802)
Q Consensus 97 ~~~~ 100 (802)
.+.+
T Consensus 190 ~d~~ 193 (248)
T PF08367_consen 190 DDKE 193 (248)
T ss_dssp T-HH
T ss_pred CcHH
Confidence 7776
No 36
>PF11180 DUF2968: Protein of unknown function (DUF2968); InterPro: IPR021350 This family of proteins has no known function.
Probab=23.00 E-value=56 Score=30.92 Aligned_cols=74 Identities=15% Similarity=0.265 Sum_probs=42.2
Q ss_pred HHHHHHHHhcCccchHhhhhc-CCCCCccccccCCCceEEEEEEeCC---------ChHHHHHHHHhHHHHHhcCCCCHH
Q 003700 637 SAYVISKHISNVWLWDRVRVS-GGAYGGFCDFDSHSGVFSFLSYRDP---------NLLKTLDIYDGTVDFLRELEMDDD 706 (802)
Q Consensus 637 al~ll~~iLg~s~L~~~iRek-g~aY~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~ite~ 706 (802)
...=|..++....| .++|.- +|.||++..|.+....+++..+.+- +...+..++..... ....+.+.
T Consensus 27 ~vaEL~qli~~~~l-tElRTtyNGsYGASLlF~~~eltYYVALfq~k~fWRViKt~d~~~AE~~Y~~F~~--Qt~~LA~~ 103 (192)
T PF11180_consen 27 NVAELQQLIQDHQL-TELRTTYNGSYGASLLFYPKELTYYVALFQQKAFWRVIKTQDEARAEAIYRDFAQ--QTARLADV 103 (192)
T ss_pred cHHHHHHHHHcCch-hhhhhhccCCccceeeecCCcceeeeeeeecCceeEeeecCChhhHHHHHHHHHH--HHHHHHHH
Confidence 34446666665555 789975 9999999998876554444333222 33333444443332 12345666
Q ss_pred HHHHHHH
Q 003700 707 TLTKAII 713 (802)
Q Consensus 707 eL~~ak~ 713 (802)
||.+++.
T Consensus 104 eirR~~L 110 (192)
T PF11180_consen 104 EIRRAQL 110 (192)
T ss_pred HHHHHHH
Confidence 6666653
No 37
>COG1725 Predicted transcriptional regulators [Transcription]
Probab=22.45 E-value=3e+02 Score=24.38 Aligned_cols=75 Identities=8% Similarity=0.024 Sum_probs=46.9
Q ss_pred chHHHHHHHHhc-----CccchHhhhhcCCCCCccccccCCCceEEEEEEeCC-C-----hHHHHHHHHhHHHHHhcCCC
Q 003700 635 NGSAYVISKHIS-----NVWLWDRVRVSGGAYGGFCDFDSHSGVFSFLSYRDP-N-----LLKTLDIYDGTVDFLRELEM 703 (802)
Q Consensus 635 ~~al~ll~~iLg-----~s~L~~~iRekg~aY~~~~~~~~~~g~~~~~~~~~~-~-----~~~~~~~~~~~~~~l~~~~i 703 (802)
.++.+-|+..+| -++-|++|.+.|..|.. .|.+.|.+-... . ...+.+.+...+..++..++
T Consensus 35 LPSvRelA~~~~VNpnTv~raY~eLE~eG~i~t~-------rg~G~fV~~~~~~~~~~~~~~~~~~~l~~~I~~~~~~G~ 107 (125)
T COG1725 35 LPSVRELAKDLGVNPNTVQRAYQELEREGIVETK-------RGKGTFVTEDAKEILDQLKRELAEEELEEFIEEAKALGL 107 (125)
T ss_pred CCcHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEe-------cCeeEEEcCCchhhHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 456666777777 35778889888998874 455555442211 1 12334455556666778899
Q ss_pred CHHHHHHHHHHHH
Q 003700 704 DDDTLTKAIIGTI 716 (802)
Q Consensus 704 te~eL~~ak~~l~ 716 (802)
+.+|+-.....+.
T Consensus 108 s~eei~~~~~~~~ 120 (125)
T COG1725 108 SLEEILELLKEIY 120 (125)
T ss_pred CHHHHHHHHHHHH
Confidence 9998876554443
No 38
>PF06296 DUF1044: Protein of unknown function (DUF1044); InterPro: IPR009387 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=20.95 E-value=2.7e+02 Score=24.47 Aligned_cols=59 Identities=19% Similarity=0.268 Sum_probs=39.7
Q ss_pred cccCCceEEEeecCCCceEEEEEEeeC--CCCCcccccChHHHHHhhhhcCCCCCCHHHHHHHHhh
Q 003700 364 GDINGVKVLQHDLFTNDVLYTEVVFDM--SSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGR 427 (802)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~Gt~~~s~~el~~~l~~ 427 (802)
..++|.++++.-.....++++.++-.. .++++++...+.-++..+.. ++.++|+..+..
T Consensus 54 GKsGG~R~I~~~~~~~~~~~l~~y~K~~~~nis~~El~~lk~la~~l~~-----~~~~~l~~~i~~ 114 (120)
T PF06296_consen 54 GKSGGYRVIYFFKQEDRIFFLYIYAKNEKANISDKELKALKKLAKELLN-----LSEEQLETLIAN 114 (120)
T ss_pred CCCCceEEEEEEEeCCEEEEEEEEcccccCCCCHHHHHHHHHHHHHHHH-----hCHHHHHHHHHc
Confidence 457899998887666767777555432 45666665555555555553 788999988865
No 39
>PF05838 Glyco_hydro_108: Glycosyl hydrolase 108; InterPro: IPR008565 This family consists of several hypothetical bacterial sequences as well as one viral sequence Q9MC03 from SWISSPROT, the function of this family is unknown.; PDB: 2NR7_A 2IKB_B 2IS5_A.
Probab=20.06 E-value=79 Score=25.67 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=17.9
Q ss_pred cCccCCCCHHHHHHHHH-hccCCCCe
Q 003700 162 PKVIPKLTFEEFKEFHR-KYYHPSNA 186 (802)
Q Consensus 162 ~~~i~~~t~~~l~~f~~-~~y~p~n~ 186 (802)
..++++||.++.+++|+ .|+.|-.+
T Consensus 39 ~~d~~~Lt~~~A~~iY~~~yW~~~~~ 64 (83)
T PF05838_consen 39 AGDMRDLTRDQAKAIYRRDYWDPLGC 64 (83)
T ss_dssp -S-CCCS-HHHHHHCHHHHTTCCCTG
T ss_pred cCchhhcCHHHHHHHHHHHhcCccch
Confidence 78899999999999996 45577655
Done!